BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022926
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561425|ref|XP_002521723.1| DNA binding protein, putative [Ricinus communis]
gi|223539114|gb|EEF40710.1| DNA binding protein, putative [Ricinus communis]
Length = 247
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/292 (63%), Positives = 204/292 (69%), Gaps = 47/292 (16%)
Query: 1 MEWDNIREAAQQETQTQNQN--QNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVY 58
MEWDN + Q + +T+N N + N NG++YVKVMTDEQLETLRKQIAVY
Sbjct: 1 MEWDNNNQENQNQRETRNGNIINTGSSVNGNGNVNGNGMLYVKVMTDEQLETLRKQIAVY 60
Query: 59 ATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQIL 118
ATICEQLVEMHK+LSA QDLA GGRLGN+YCDPLMTSGG HKI+ARQRWTPTPVQLQ+L
Sbjct: 61 ATICEQLVEMHKTLSAQQDLA--GGRLGNLYCDPLMTSGG-HKITARQRWTPTPVQLQVL 117
Query: 119 ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHN 178
E IFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRARSKRKQLV+SS
Sbjct: 118 ERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASS------ 171
Query: 179 GGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPRPR 238
+SEVETEVDSL +E+K TKPE SQ H PR
Sbjct: 172 -----------NTESEVETEVDSL---NENK-TKPEIFH-----SQQNH---------PR 202
Query: 239 DDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGMPGSYNLYDHAEDYSMAG 290
+D +CF +P SS+LHFLGV P + G PGSYNLYD AEDY MAG
Sbjct: 203 AED--LCFQSPE--ISSELHFLGVL---PNQRDGAPGSYNLYDQAEDYGMAG 247
>gi|3955021|emb|CAA09367.1| HB2 homeodomain protein [Populus tremula x Populus tremuloides]
Length = 261
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 200/292 (68%), Gaps = 46/292 (15%)
Query: 1 MEWDNIREAAQQETQTQNQNQN--QRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVY 58
M+WDN +E Q Q Q + +N N N N ++YVKVMTDEQLETLRKQIAVY
Sbjct: 14 MDWDNNQENHQDSHQNQRECRNGINGTNVNVNGNGGTNMLYVKVMTDEQLETLRKQIAVY 73
Query: 59 ATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQIL 118
A ICEQLVEMHK+LSA QDLA GGRLGN+YCDPLM SGG HKI+ARQRWTPTPVQLQIL
Sbjct: 74 AAICEQLVEMHKTLSAQQDLA--GGRLGNLYCDPLMASGG-HKITARQRWTPTPVQLQIL 130
Query: 119 ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHN 178
E IFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRARSKRKQLV+SS N
Sbjct: 131 ERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASSNN---- 186
Query: 179 GGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPRPR 238
A+SEVETEVDSL ++ KPE H+ P PR
Sbjct: 187 ------------AESEVETEVDSL-----NEKKKPEIF---HAQQNP-----------PR 215
Query: 239 DDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGMPGSYNLYDHAEDYSMAG 290
+D +CF +P SS+LHFLG ++ G+PG+YNLYD AEDY MAG
Sbjct: 216 AED--LCFQSPE--ISSELHFLG--DDHLTGKVGVPGNYNLYDQAEDYGMAG 261
>gi|224081491|ref|XP_002306432.1| predicted protein [Populus trichocarpa]
gi|222855881|gb|EEE93428.1| predicted protein [Populus trichocarpa]
Length = 248
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 200/292 (68%), Gaps = 46/292 (15%)
Query: 1 MEWDNIREAAQQETQTQNQNQN--QRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVY 58
M+WDN +E Q Q Q + +N N N N ++YVKVMTDEQLETLRKQIAVY
Sbjct: 1 MDWDNNQENHQDSHQNQRECRNGINGTNVNVNGNGGTNMLYVKVMTDEQLETLRKQIAVY 60
Query: 59 ATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQIL 118
A ICEQLVEMHK+LSA QDLA GGRLGN+YCDPLM SGG HKI+ARQRWTPTPVQLQIL
Sbjct: 61 AAICEQLVEMHKTLSAQQDLA--GGRLGNLYCDPLMASGG-HKITARQRWTPTPVQLQIL 117
Query: 119 ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHN 178
E IFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRARSKRKQLV+SS N
Sbjct: 118 ERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASSNN---- 173
Query: 179 GGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPRPR 238
A+SEVETEVDSL ++ KPE H+ P PR
Sbjct: 174 ------------AESEVETEVDSL-----NEKKKPEIF---HAQQNP-----------PR 202
Query: 239 DDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGMPGSYNLYDHAEDYSMAG 290
+D +CF +P SS+LHFLG ++ G+PG+YNLYD AEDY MAG
Sbjct: 203 AED--LCFQSPE--ISSELHFLG--DDHLTGKMGVPGNYNLYDQAEDYGMAG 248
>gi|40233087|gb|AAR83341.1| homeodomain protein HB2 [Populus tomentosa]
Length = 257
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/294 (60%), Positives = 199/294 (67%), Gaps = 48/294 (16%)
Query: 1 MEWDNIREAAQQETQTQNQNQN----QRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIA 56
M+WDN +E Q Q Q + +N N N N N +YVKVMTDEQLETLRKQIA
Sbjct: 8 MDWDNNQENHQDSHQNQRECRNGINGTNVNVNVNGNGGNNTLYVKVMTDEQLETLRKQIA 67
Query: 57 VYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQ 116
VYA ICEQLVEMHK+LSA QDLA GGRLGN+YCDPLM SGG HKI+ARQRWTPTPVQLQ
Sbjct: 68 VYAAICEQLVEMHKTLSAQQDLA--GGRLGNLYCDPLMASGG-HKITARQRWTPTPVQLQ 124
Query: 117 ILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTL 176
ILE IFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRARSKRKQLV+SS N
Sbjct: 125 ILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASSNN-- 182
Query: 177 HNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPR 236
A+SEVETEVDSL ++ KPE H+ P
Sbjct: 183 --------------AESEVETEVDSL-----NEKKKPEIF---HAQQNP----------- 209
Query: 237 PRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGMPGSYNLYDHAEDYSMAG 290
PR +D +CF P SS+LHFLG ++ G+PG+YNLYD AEDY MAG
Sbjct: 210 PRAED--LCFQGPE--ISSELHFLG--DDHLTGKMGVPGNYNLYDQAEDYGMAG 257
>gi|225431417|ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
vinifera]
Length = 281
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 181/265 (68%), Gaps = 34/265 (12%)
Query: 37 VMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTS 96
V+Y+KVMTD Q+E LRKQI+VYATICEQLVEMHKSL++HQDLA G RLGN+YCDPLMTS
Sbjct: 40 VLYMKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLA--GVRLGNLYCDPLMTS 97
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G HKI+ARQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT +LSQHGQISETNVYNWF
Sbjct: 98 TG-HKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWF 156
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN- 215
QNRRARSKRKQLV++ N ADSEVETEV+S + K TK EN
Sbjct: 157 QNRRARSKRKQLVTAPNN----------------ADSEVETEVES----PKDKKTKSENF 196
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDD-------DDPMCFHTPADISSS-QLHFLGVFSNNP 267
L +S S+P+ L P R D + F + I S L + ++ N
Sbjct: 197 LPQQNSASRPEDLCFQNPELGSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFYAGND 256
Query: 268 RKMGGM--PGSYNLYDHAEDYSMAG 290
++G M PGSYN Y EDYSM+G
Sbjct: 257 HQIGKMEVPGSYNPYQQTEDYSMSG 281
>gi|297798368|ref|XP_002867068.1| homeobox-leucine zipper protein [Arabidopsis lyrata subsp. lyrata]
gi|297312904|gb|EFH43327.1| homeobox-leucine zipper protein [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/299 (54%), Positives = 195/299 (65%), Gaps = 43/299 (14%)
Query: 1 MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT 60
MEWDN Q+ + + N +G + + + G MYVKVMTDEQ ETLRKQIA+Y T
Sbjct: 2 MEWDN------QQQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGT 55
Query: 61 ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES 120
ICE+LVEMHK+L+A QDLA GGRLG +Y DP+M+S G HK++ARQRWTPTPVQLQILE
Sbjct: 56 ICERLVEMHKTLTAQQDLA--GGRLGGLYADPMMSSIG-HKMTARQRWTPTPVQLQILER 112
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGG 180
IFDQGTGTPSKQKIKEIT ELSQHG+I+E NVYNWFQNRRARSKRKQ S+
Sbjct: 113 IFDQGTGTPSKQKIKEITEELSQHGEIAEQNVYNWFQNRRARSKRKQQGGGSSG------ 166
Query: 181 GGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHL---RNLPPTPRP 237
+SEVETEV++L K +PE+L S + ++ TPRP
Sbjct: 167 -------NNNGESEVETEVEAL----NEKRVRPESLLSLPDGNNNNNVLGSTTTTTTPRP 215
Query: 238 RDDDDPMCFHTPADISSSQLHFLGVFSNNPR------KMGGMPGSYNLYDHAEDYSMAG 290
D +CF +P SS LH LGV + NPR KM G+ SYNLYDH EDY M+G
Sbjct: 216 ED----LCFQSPE--MSSDLHLLGVLA-NPRDEHLVGKM-GLSESYNLYDHVEDYGMSG 266
>gi|296088650|emb|CBI37641.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 178/262 (67%), Gaps = 34/262 (12%)
Query: 40 VKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGG 99
+KVMTD Q+E LRKQI+VYATICEQLVEMHKSL++HQDLA G RLGN+YCDPLMTS G
Sbjct: 1 MKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLA--GVRLGNLYCDPLMTSTG- 57
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
HKI+ARQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT +LSQHGQISETNVYNWFQNR
Sbjct: 58 HKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNR 117
Query: 160 RARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN-LSS 218
RARSKRKQLV++ N ADSEVETEV+S + K TK EN L
Sbjct: 118 RARSKRKQLVTAPNN----------------ADSEVETEVES----PKDKKTKSENFLPQ 157
Query: 219 AHSTSQPQHLRNLPPTPRPRDD-------DDPMCFHTPADISSS-QLHFLGVFSNNPRKM 270
+S S+P+ L P R D + F + I S L + ++ N ++
Sbjct: 158 QNSASRPEDLCFQNPELGSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFYAGNDHQI 217
Query: 271 GGM--PGSYNLYDHAEDYSMAG 290
G M PGSYN Y EDYSM+G
Sbjct: 218 GKMEVPGSYNPYQQTEDYSMSG 239
>gi|225431415|ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
Length = 276
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/281 (54%), Positives = 175/281 (62%), Gaps = 68/281 (24%)
Query: 38 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSG 97
YVKVMTD Q+E LRKQI+VYATICEQLVEMHKSL++HQDLA G RLGN+YCDPLMTS
Sbjct: 36 FYVKVMTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLA--GVRLGNLYCDPLMTST 93
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G HKISARQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT +LSQHGQISETNVYNWFQ
Sbjct: 94 G-HKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQ 152
Query: 158 NRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
NRRA+SKRKQL++ N A+SEV TEV+S + + TK EN
Sbjct: 153 NRRAQSKRKQLITMPNN----------------AESEVATEVES----PKDQKTKSENFL 192
Query: 218 SAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFL----------------- 260
+++ RP D +CF P S+LHFL
Sbjct: 193 PQQNSAS-----------RPED----LCFQNPE--IGSRLHFLDQQTHKEENIFPSDGGI 235
Query: 261 ---------GVFSNNPRKMGGM--PGSYNLYDHAEDYSMAG 290
++ N ++G M PGSYN Y H EDYSM G
Sbjct: 236 KPSGNPSQVAFYAGNDHQIGKMEVPGSYNPYQHTEDYSMTG 276
>gi|15237035|ref|NP_195280.1| WUSCHEL-related homeobox 13 [Arabidopsis thaliana]
gi|61217457|sp|O81788.1|WOX13_ARATH RecName: Full=WUSCHEL-related homeobox 13
gi|3367573|emb|CAA20025.1| homeodomain - like protein [Arabidopsis thaliana]
gi|7270506|emb|CAB80271.1| homeodomain-like protein [Arabidopsis thaliana]
gi|15081751|gb|AAK82530.1| AT4g35550/F8D20_60 [Arabidopsis thaliana]
gi|23308275|gb|AAN18107.1| At4g35550/F8D20_60 [Arabidopsis thaliana]
gi|37955227|gb|AAP37142.1| WOX13 protein [Arabidopsis thaliana]
gi|332661129|gb|AEE86529.1| WUSCHEL-related homeobox 13 [Arabidopsis thaliana]
Length = 268
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 192/300 (64%), Gaps = 43/300 (14%)
Query: 1 MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT 60
MEWDN Q + + N +G + + + G MYVKVMTDEQ ETLRKQIA+Y T
Sbjct: 2 MEWDN------QLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGT 55
Query: 61 ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES 120
ICE+LVEMHK+L+A QDLA GGR+G +Y DP+M+S G HK++ARQRWTPTPVQLQILE
Sbjct: 56 ICERLVEMHKTLTAQQDLA--GGRMGGLYADPMMSSLG-HKMTARQRWTPTPVQLQILER 112
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGG 180
IFDQGTGTPSKQKIK+IT ELSQHGQI+E NVYNWFQNRRARSKRKQ S+
Sbjct: 113 IFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSG------ 166
Query: 181 GGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQH----LRNLPPTPR 236
+SEVETEV++L +E + +PE+L + + PR
Sbjct: 167 -------NNNGESEVETEVEAL---NEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPR 216
Query: 237 PRDDDDPMCFHTPADISSSQLHFLGVFSNNPR------KMGGMPGSYNLYDHAEDYSMAG 290
P D +CF +P SS LH L V S NPR KM G+ SYNLYDH EDY M+G
Sbjct: 217 PED----LCFQSPE--ISSDLHLLDVLS-NPRDEHLVGKM-GLAESYNLYDHVEDYGMSG 268
>gi|388517213|gb|AFK46668.1| unknown [Medicago truncatula]
Length = 264
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 176/274 (64%), Gaps = 50/274 (18%)
Query: 38 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSG 97
MYVKVMTDEQLETLRKQIAVYATICEQLVEMHK+LSA QDLA G RLGN+YCD LMT+G
Sbjct: 20 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLSAQQDLA--GVRLGNLYCDSLMTAG 77
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
HKI++RQRWTPTPVQLQILE IFDQG GTPSK+KIKEI ELSQHGQISETNVYNWFQ
Sbjct: 78 --HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQ 135
Query: 158 NRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
NRRARSKRK + NGG +SEVETEVDS + K TKPE
Sbjct: 136 NRRARSKRK---------MQNGG-------TSNTESEVETEVDS-----KDKKTKPEEFH 174
Query: 218 SAHS---------------TSQPQHLR---NLPPTPRPRDDDDPMCFHTPADISSSQLHF 259
S S S+ Q+L N + P D + ++S L+
Sbjct: 175 SQQSAALGDENLCFQNQEKCSELQYLNHGSNKTYSVFPLDGG----IRSTRNLSGVSLYD 230
Query: 260 LGVFSNNPRKMGG---MPGSYNLYDHAEDYSMAG 290
+ ++ +GG + GSYN+Y AED+++AG
Sbjct: 231 EVLSNSRNDYLGGKMEVSGSYNIYQQAEDFNLAG 264
>gi|217073748|gb|ACJ85234.1| unknown [Medicago truncatula]
Length = 264
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 175/270 (64%), Gaps = 42/270 (15%)
Query: 38 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSG 97
MYVKVMTDEQLETLRKQIAVYATICEQLVEMHK+LSA QDLA G RLGN+YCD LMT+G
Sbjct: 20 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLSAQQDLA--GVRLGNLYCDSLMTAG 77
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
HKI++RQRWTPTPVQLQILE IFDQG GTPSK+KIKEI ELSQHGQISETNVYNWFQ
Sbjct: 78 --HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQ 135
Query: 158 NRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
NRRARSKRK + NG G +SEVETEVDS + K TKPE
Sbjct: 136 NRRARSKRK---------MQNG-------GTSNTESEVETEVDS-----KDKRTKPEEFH 174
Query: 218 SAHSTSQ------PQHLRNLPPTPRPRDDDDPMCFHTPAD---ISSSQLHFLGVFS---N 265
S S + Q+ + F P+D S+ L + ++ +
Sbjct: 175 SQQSAALGDENLCFQNQEKCFELQYLNHGSNKTYFVFPSDGGIRSTRNLSGVSLYDEVLS 234
Query: 266 NPRK--MGG---MPGSYNLYDHAEDYSMAG 290
N R +GG + GSYN+Y AED+++AG
Sbjct: 235 NSRNDYLGGKMEVSGSYNIYQQAEDFNLAG 264
>gi|356536482|ref|XP_003536766.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 281
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/254 (59%), Positives = 169/254 (66%), Gaps = 38/254 (14%)
Query: 19 QNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDL 78
Q Q Q G N + N +MYVKVMTDEQLETLRKQIAVY TICEQL+EMH++LSA QDL
Sbjct: 8 QKQLQSGNVNVDAN--GELMYVKVMTDEQLETLRKQIAVYGTICEQLIEMHRTLSAQQDL 65
Query: 79 AAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT 138
A G RLGNIYCDPLMTSGG HKI++RQRWTPTPVQLQILE IFDQG GTPSK+KIKEIT
Sbjct: 66 A--GVRLGNIYCDPLMTSGG-HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIT 122
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRK-QLVSSSANTLHNGGGGGAGAGAGGADSEVET 197
EL QHGQISETNVYNWFQNRRARSKRK Q V++ +NT +SEVET
Sbjct: 123 AELGQHGQISETNVYNWFQNRRARSKRKLQNVAAYSNT----------------ESEVET 166
Query: 198 EVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQL 257
EVDS + K TK E Q QH N+ T + +CF P + S L
Sbjct: 167 EVDS-----KDKKTKAE------EEFQSQHNNNISTTS---GGAEKLCFQNP-QVHSDYL 211
Query: 258 HFLG-VFSNNPRKM 270
+L SN P M
Sbjct: 212 QYLNPADSNKPYSM 225
>gi|296088649|emb|CBI37640.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/276 (53%), Positives = 171/276 (61%), Gaps = 68/276 (24%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKI 102
MTD Q+E LRKQI+VYATICEQLVEMHKSL++HQDLA G RLGN+YCDPLMTS G HKI
Sbjct: 1 MTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLA--GVRLGNLYCDPLMTSTG-HKI 57
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
SARQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT +LSQHGQISETNVYNWFQNRRA+
Sbjct: 58 SARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRAQ 117
Query: 163 SKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHST 222
SKRKQL++ N A+SEV TEV+S + + TK EN ++
Sbjct: 118 SKRKQLITMPNN----------------AESEVATEVES----PKDQKTKSENFLPQQNS 157
Query: 223 SQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFL---------------------- 260
+ RP D +CF P S+LHFL
Sbjct: 158 AS-----------RPED----LCFQNPE--IGSRLHFLDQQTHKEENIFPSDGGIKPSGN 200
Query: 261 ----GVFSNNPRKMGGM--PGSYNLYDHAEDYSMAG 290
++ N ++G M PGSYN Y H EDYSM G
Sbjct: 201 PSQVAFYAGNDHQIGKMEVPGSYNPYQHTEDYSMTG 236
>gi|356568981|ref|XP_003552686.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 266
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 182/276 (65%), Gaps = 51/276 (18%)
Query: 37 VMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTS 96
+MYVKVMTDEQLETLRKQIAVYATICEQL+EMHK++S+HQDLA G RLGN+YCDPL+ S
Sbjct: 20 MMYVKVMTDEQLETLRKQIAVYATICEQLIEMHKNISSHQDLA--GIRLGNMYCDPLLGS 77
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GG HKI++RQRWTP+ +QLQILE IFDQGTGTP+K+KIKEIT ELSQHGQISETNVYNWF
Sbjct: 78 GG-HKIASRQRWTPSAMQLQILERIFDQGTGTPTKEKIKEITNELSQHGQISETNVYNWF 136
Query: 157 QNRRARSKRKQL-VSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
QNRRARSKRKQ V+ SAN A+SEVETEVDS + K TKP+
Sbjct: 137 QNRRARSKRKQQNVAPSAN----------------AESEVETEVDS-----KDKKTKPDE 175
Query: 216 LSSAHSTSQPQHLRNL------------PPTPRPRDDDDPMCFHTPADISSSQLH----- 258
S S S NL P + +P F + A + S++
Sbjct: 176 FQSPPSVSAVPADDNLGFQNHGSLQYLNPESNKPDS-----VFPSDASLRSTRNFNHVPV 230
Query: 259 FLGVFSNNPRKM--GGM--PGSYNLYDHAEDYSMAG 290
F G+ SN+ G M P +Y+LY A D++MAG
Sbjct: 231 FDGLLSNSTSDYLTGKMEAPENYDLYQPAGDFNMAG 266
>gi|356575375|ref|XP_003555817.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 284
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 155/234 (66%), Gaps = 37/234 (15%)
Query: 37 VMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTS 96
+MYVKVMTDEQLETLRKQIAVY TICEQL+EMH++LSA QDLA G RLGNIYCD LMTS
Sbjct: 32 LMYVKVMTDEQLETLRKQIAVYGTICEQLIEMHRTLSAQQDLA--GVRLGNIYCDQLMTS 89
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GG HKI++RQRWTPTPVQLQILE IFDQG GTPSK+KIKEIT EL QHGQISETNVYNWF
Sbjct: 90 GG-HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWF 148
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENL 216
QNRRARSKR+ + +NT +SEV+TEVDS KT E
Sbjct: 149 QNRRARSKRRLQNVAPSNT----------------ESEVDTEVDS----KNKKTKAEEEF 188
Query: 217 SSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKM 270
S H+ + + +CF P + S LH+L SN P M
Sbjct: 189 QSQHNIT-------------TSGGAEKLCFQNP-QVYSDHLHYLNPDSNKPYSM 228
>gi|225457574|ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
gi|297745565|emb|CBI40730.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/181 (69%), Positives = 140/181 (77%), Gaps = 23/181 (12%)
Query: 38 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSG 97
+YVKVMTDEQ+E LR+QI+VYATICEQLVEMHK+++ QDLA G RLGNIYCDPLM S
Sbjct: 32 LYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLA--GMRLGNIYCDPLMASA 89
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G HKIS+RQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT EL+QHGQISETNVYNWFQ
Sbjct: 90 G-HKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQ 148
Query: 158 NRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
NRRARSKRKQ V N ADSEVET+V+S + K TKP+N+
Sbjct: 149 NRRARSKRKQSVPLPNN----------------ADSEVETDVES----PKEKKTKPDNIQ 188
Query: 218 S 218
S
Sbjct: 189 S 189
>gi|449455611|ref|XP_004145546.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
gi|449519581|ref|XP_004166813.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
Length = 269
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 142/183 (77%), Gaps = 22/183 (12%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G +YVKVMTDEQ+E LR+QI+VYA+ICEQLVEMHK+++A QDLA G RLGN+YCDP+M
Sbjct: 29 GGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLA--GMRLGNLYCDPIMA 86
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S GHKI+ARQRWTPTPVQLQILE IFD+G GTPSKQKIK+IT++L+QHGQISE NVYNW
Sbjct: 87 SAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQISEANVYNW 146
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
FQNRRARSKRKQ AN+L N ADSE ETEVDS + K TKPE
Sbjct: 147 FQNRRARSKRKQ-----ANSLPN-----------NADSEPETEVDS----PKEKKTKPEA 186
Query: 216 LSS 218
+
Sbjct: 187 FQT 189
>gi|255639435|gb|ACU20012.1| unknown [Glycine max]
Length = 180
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 151/198 (76%), Gaps = 29/198 (14%)
Query: 21 QNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAA 80
Q QR N N + MYVKVMTDEQLETLRKQIAVYATICEQL+EMHK++S+HQDLA
Sbjct: 8 QKQRWQPNGNAEM----MYVKVMTDEQLETLRKQIAVYATICEQLIEMHKNISSHQDLA- 62
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE 140
G RLGN+YCDPL+ SGG HKI++R+RWTP+ +QLQILE IFDQGTGTP+K+KIKEIT E
Sbjct: 63 -GIRLGNMYCDPLLGSGG-HKIASRRRWTPSAMQLQILERIFDQGTGTPTKEKIKEITNE 120
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQL-VSSSANTLHNGGGGGAGAGAGGADSEVETEV 199
LSQHGQISETNVYNWFQNRRARSKRKQ V+ SAN A+SEVETEV
Sbjct: 121 LSQHGQISETNVYNWFQNRRARSKRKQQNVAPSAN----------------AESEVETEV 164
Query: 200 DSLLLHDEHKTTKPENLS 217
DS + K TKP +S
Sbjct: 165 DS-----KDKKTKPGRIS 177
>gi|449456871|ref|XP_004146172.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
gi|449495111|ref|XP_004159737.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
Length = 282
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 173/284 (60%), Gaps = 69/284 (24%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G +YVKVMTD+QLETLRKQIAVYATICEQLVEMHK+L+AHQDL G RLGN+YC+PLMT
Sbjct: 37 GALYVKVMTDDQLETLRKQIAVYATICEQLVEMHKTLTAHQDLT--GMRLGNMYCEPLMT 94
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S HKI++RQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT EL QHGQISE+NVYNW
Sbjct: 95 SSS-HKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELGQHGQISESNVYNW 153
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
FQNRRARSKRKQ ++ A G ++EVE+ D K TKP +
Sbjct: 154 FQNRRARSKRKQQSAAPA------------YGESEVETEVESPKD--------KKTKPVD 193
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLG--------VFSNN- 266
+ S++ P DD MCF +P SS+LHFL +F +N
Sbjct: 194 FQTNQSSA-------------PLGDD--MCFQSPE--MSSELHFLDPNTNKADTLFPSNG 236
Query: 267 ----PRKMGGM----------------PGSYNLYDHAEDYSMAG 290
R M P +Y++Y AE Y+M G
Sbjct: 237 SLKTARSFSQMSFYEAGNEQLTGKIETPENYSIYQQAEGYNMTG 280
>gi|326500718|dbj|BAJ95025.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519246|dbj|BAJ96622.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521428|dbj|BAJ96917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/174 (68%), Positives = 136/174 (78%), Gaps = 10/174 (5%)
Query: 1 MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT 60
MEWD + +A + +RGG D + YVKVMTDEQ+E LRKQI++YAT
Sbjct: 1 MEWD--KASAAAAAAAAGEPAEERGGAGD------ALGYVKVMTDEQMEVLRKQISIYAT 52
Query: 61 ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES 120
ICEQLVEMH++L+AHQD + AG RLGN+YCDPLM GG HKI+ARQRWTPT +QLQILES
Sbjct: 53 ICEQLVEMHRALTAHQD-SIAGMRLGNLYCDPLMVHGG-HKITARQRWTPTQMQLQILES 110
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRARSKRKQ SS N
Sbjct: 111 IFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAASSLPN 164
>gi|147865345|emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
Length = 243
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 135/176 (76%), Gaps = 23/176 (13%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKI 102
MTDEQ+E LR+QI+VYATICEQLVEMHK+++ QDLA G RLGNIYCDPLM S G HKI
Sbjct: 1 MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLA--GMRLGNIYCDPLMASAG-HKI 57
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
S+RQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT EL+QHGQISETNVYNWFQNRRAR
Sbjct: 58 SSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRAR 117
Query: 163 SKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSS 218
SKRKQ V N ADSEVET+V+S + K TKP+N+ S
Sbjct: 118 SKRKQSVPLPNN----------------ADSEVETDVES----PKEKKTKPDNIQS 153
>gi|357125613|ref|XP_003564486.1| PREDICTED: WUSCHEL-related homeobox 8-like [Brachypodium
distachyon]
Length = 273
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 135/174 (77%), Gaps = 12/174 (6%)
Query: 1 MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT 60
MEWD +A + ++RGG V + YVKVMTDEQ+E LRKQI++YAT
Sbjct: 1 MEWD---KATAAAVAVAGEQVDERGG-------VEALGYVKVMTDEQMEVLRKQISIYAT 50
Query: 61 ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES 120
ICEQLVEMH++L+AHQD + AG RLGN+YCDPLM GG HKI+ARQRWTPT +QLQILES
Sbjct: 51 ICEQLVEMHRALTAHQD-SIAGMRLGNMYCDPLMVHGG-HKITARQRWTPTQMQLQILES 108
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRARSKRKQ S N
Sbjct: 109 IFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAASLPNN 162
>gi|115440703|ref|NP_001044631.1| Os01g0818400 [Oryza sativa Japonica Group]
gi|75286325|sp|Q5QMM3.1|WOX8_ORYSJ RecName: Full=WUSCHEL-related homeobox 8; AltName: Full=OsWOX8;
AltName: Full=Protein WOX13
gi|56201899|dbj|BAD73349.1| putative HB2 homeodomain protein [Oryza sativa Japonica Group]
gi|113534162|dbj|BAF06545.1| Os01g0818400 [Oryza sativa Japonica Group]
gi|215696986|dbj|BAG90980.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189278|gb|EEC71705.1| hypothetical protein OsI_04217 [Oryza sativa Indica Group]
gi|222619452|gb|EEE55584.1| hypothetical protein OsJ_03880 [Oryza sativa Japonica Group]
Length = 267
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 131/167 (78%), Gaps = 15/167 (8%)
Query: 1 MEWDNIREAAQQETQTQNQNQNQRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYAT 60
MEWD + ++ + +D G+ YVKVMTDEQ+E LRKQI++YAT
Sbjct: 1 MEWDKAKASSGEAV-------------DDRGGGEGGLGYVKVMTDEQMEVLRKQISIYAT 47
Query: 61 ICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILES 120
ICEQLVEMH++L+A QD + AG RLGN+YCDPLM GG HKI+ARQRWTPTP+QLQILE+
Sbjct: 48 ICEQLVEMHRALTAQQD-SIAGMRLGNLYCDPLMVPGG-HKITARQRWTPTPMQLQILEN 105
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRARSKRKQ
Sbjct: 106 IFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 152
>gi|194695732|gb|ACF81950.1| unknown [Zea mays]
gi|195606070|gb|ACG24865.1| WUSCHEL-related homeobox 14 [Zea mays]
gi|408690272|gb|AFU81596.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|413952112|gb|AFW84761.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 282
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/136 (78%), Positives = 117/136 (86%), Gaps = 2/136 (1%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGG 98
YVKVMTDEQ+E LRKQI++YATICEQLVEMH+ L+ HQD AG R N+YCDPL+ GG
Sbjct: 29 YVKVMTDEQMEVLRKQISIYATICEQLVEMHRVLTEHQD-TIAGLRFSNLYCDPLIIPGG 87
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
HKI+ARQRW PTP+QLQILESIFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQN
Sbjct: 88 -HKITARQRWQPTPMQLQILESIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQN 146
Query: 159 RRARSKRKQLVSSSAN 174
RRARSKRKQ +S N
Sbjct: 147 RRARSKRKQAAASLPN 162
>gi|356508610|ref|XP_003523048.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 208
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/133 (78%), Positives = 119/133 (89%), Gaps = 3/133 (2%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G +YVKVMTD+Q+E LR+QI+VYATICEQLVEMHK+++ QDLA G RLGN+YCDPLM
Sbjct: 12 GGLYVKVMTDDQMELLRQQISVYATICEQLVEMHKAVTTQQDLA--GLRLGNLYCDPLMA 69
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
G HKI+ARQRWTPTP+QLQILE IFD+G GTPSKQKIK+IT+EL QHGQISETNVYNW
Sbjct: 70 CSG-HKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITIELGQHGQISETNVYNW 128
Query: 156 FQNRRARSKRKQL 168
FQNRRARSKRKQL
Sbjct: 129 FQNRRARSKRKQL 141
>gi|388509298|gb|AFK42715.1| unknown [Lotus japonicus]
Length = 223
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 106/147 (72%), Positives = 125/147 (85%), Gaps = 4/147 (2%)
Query: 27 ENDNNNVVNGV-MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRL 85
E + +++ NG +YVKVMTDEQ+E LR+QI+VYATIC+ LVEMHK+++ QDLA G RL
Sbjct: 2 EGEQHDISNGGGLYVKVMTDEQMELLRQQISVYATICDSLVEMHKAITTQQDLA--GLRL 59
Query: 86 GNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
GN+YCDPLM G HKI+ARQRWTPTP+QLQ+LE IFDQG GTPSKQKIKEI +EL QHG
Sbjct: 60 GNLYCDPLMVCSG-HKITARQRWTPTPLQLQMLEQIFDQGNGTPSKQKIKEIAIELGQHG 118
Query: 146 QISETNVYNWFQNRRARSKRKQLVSSS 172
QISETNVYNWFQNRRARSKRKQL ++
Sbjct: 119 QISETNVYNWFQNRRARSKRKQLAPTT 145
>gi|351726702|ref|NP_001238671.1| uncharacterized protein LOC100527354 [Glycine max]
gi|255632155|gb|ACU16430.1| unknown [Glycine max]
Length = 148
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 3/131 (2%)
Query: 37 VMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTS 96
+M VKVMTDEQLE LRKQIAVYATICEQL+EMHK++SAHQDLA G RLGN+YCDPL+ S
Sbjct: 21 MMCVKVMTDEQLEILRKQIAVYATICEQLIEMHKNISAHQDLA--GIRLGNMYCDPLLGS 78
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GG KI++RQRWTPT +QLQILE IFDQG GTP+K+KIKEIT ELSQHGQISETNVYNWF
Sbjct: 79 GG-LKIASRQRWTPTAMQLQILERIFDQGIGTPTKEKIKEITNELSQHGQISETNVYNWF 137
Query: 157 QNRRARSKRKQ 167
QNRRARSKRKQ
Sbjct: 138 QNRRARSKRKQ 148
>gi|356517925|ref|XP_003527636.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 225
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 122/142 (85%), Gaps = 3/142 (2%)
Query: 27 ENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLG 86
+ N + G +YVKVMTD+Q+E LR+QI+VYATIC+QLVEMHK+++ QDLA G RLG
Sbjct: 8 QTSNAGGIIGGLYVKVMTDDQMELLRQQISVYATICQQLVEMHKAVTTQQDLA--GLRLG 65
Query: 87 NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ 146
N+YCDPLM G HKI+ARQRWTPTP+QLQ+LE IFD+G GTPSKQKIK+IT+EL QHGQ
Sbjct: 66 NLYCDPLMACSG-HKITARQRWTPTPLQLQVLERIFDEGNGTPSKQKIKDITIELGQHGQ 124
Query: 147 ISETNVYNWFQNRRARSKRKQL 168
ISETNVYNWFQNRRARSKRKQL
Sbjct: 125 ISETNVYNWFQNRRARSKRKQL 146
>gi|295913230|gb|ADG57873.1| transcription factor [Lycoris longituba]
Length = 153
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 118/133 (88%), Gaps = 2/133 (1%)
Query: 35 NGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLM 94
+G YVKVMTDEQ+E LR+QI+VYA ICEQLVEMHK+++A D + +G RLGN+YCDPL+
Sbjct: 3 DGATYVKVMTDEQMEDLRRQISVYAAICEQLVEMHKAITARND-SISGMRLGNLYCDPLV 61
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
TSGG HKI+ARQRW PTP+QLQIL+ IFDQG GTPSKQKIKEI +LSQHGQISETNVYN
Sbjct: 62 TSGG-HKIAARQRWIPTPIQLQILDGIFDQGNGTPSKQKIKEIAHDLSQHGQISETNVYN 120
Query: 155 WFQNRRARSKRKQ 167
WFQNRRARSKRKQ
Sbjct: 121 WFQNRRARSKRKQ 133
>gi|242054789|ref|XP_002456540.1| hypothetical protein SORBIDRAFT_03g038080 [Sorghum bicolor]
gi|241928515|gb|EES01660.1| hypothetical protein SORBIDRAFT_03g038080 [Sorghum bicolor]
Length = 278
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/164 (67%), Positives = 125/164 (76%), Gaps = 18/164 (10%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGG 98
YVKVMTDEQ+E LRKQI++YATICEQLV+MH++L+ HQD AG R N+YCDPL+ GG
Sbjct: 36 YVKVMTDEQMEVLRKQISIYATICEQLVDMHRTLTEHQD-TIAGMRFSNLYCDPLIIPGG 94
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
HKI+ARQRW PTP+QLQILE+IFDQG GTPSKQKIKEIT ELS HGQISETNVYNWFQN
Sbjct: 95 -HKITARQRWQPTPMQLQILENIFDQGNGTPSKQKIKEITAELSHHGQISETNVYNWFQN 153
Query: 159 RRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSL 202
RRARSKRKQ S N A+SE E + +SL
Sbjct: 154 RRARSKRKQAASLPNN----------------AESEAEVDEESL 181
>gi|414865514|tpg|DAA44071.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
gi|414879952|tpg|DAA57083.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 295
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 158/267 (59%), Gaps = 39/267 (14%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGG 98
YVKVMTDEQ+E LRKQI++YATICEQLVEMH++L+ HQD AG R N+YCDP + GG
Sbjct: 53 YVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTEHQD-TIAGIRFSNLYCDPQIIPGG 111
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
HKI+ARQRW PTP+QLQILE+IFDQG GTPSKQ+IKEIT ELS HGQISETNVYNWFQN
Sbjct: 112 -HKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSHHGQISETNVYNWFQN 170
Query: 159 RRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEH----KTTKPE 214
RRARSKRKQ S N +E E EVD L D+ ++ +
Sbjct: 171 RRARSKRKQAASLPNN------------------AESEAEVDEESLTDKKPKSDRSLQDN 212
Query: 215 NLSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHT-----PADISSSQLHFLGVFSNNPRK 269
AH+ + + +L D M + + SS Q+ F G NPR
Sbjct: 213 KAMGAHNADRISGMHHLDTD---HDQIGGMMYGCNDNGLRSSGSSGQMSFYGNIMPNPR- 268
Query: 270 MGGMPG------SYNLYDHAEDYSMAG 290
+ PG S++ H E + M G
Sbjct: 269 IDHFPGKVESSRSFSHLQHGEGFDMFG 295
>gi|223949065|gb|ACN28616.1| unknown [Zea mays]
gi|408690322|gb|AFU81621.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414865513|tpg|DAA44070.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
gi|414879951|tpg|DAA57082.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 273
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 158/267 (59%), Gaps = 39/267 (14%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGG 98
YVKVMTDEQ+E LRKQI++YATICEQLVEMH++L+ HQD AG R N+YCDP + GG
Sbjct: 31 YVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTEHQD-TIAGIRFSNLYCDPQIIPGG 89
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
HKI+ARQRW PTP+QLQILE+IFDQG GTPSKQ+IKEIT ELS HGQISETNVYNWFQN
Sbjct: 90 -HKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSHHGQISETNVYNWFQN 148
Query: 159 RRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEH----KTTKPE 214
RRARSKRKQ S N +E E EVD L D+ ++ +
Sbjct: 149 RRARSKRKQAASLPNN------------------AESEAEVDEESLTDKKPKSDRSLQDN 190
Query: 215 NLSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHT-----PADISSSQLHFLGVFSNNPRK 269
AH+ + + +L D M + + SS Q+ F G NPR
Sbjct: 191 KAMGAHNADRISGMHHLDTD---HDQIGGMMYGCNDNGLRSSGSSGQMSFYGNIMPNPR- 246
Query: 270 MGGMPG------SYNLYDHAEDYSMAG 290
+ PG S++ H E + M G
Sbjct: 247 IDHFPGKVESSRSFSHLQHGEGFDMFG 273
>gi|357120297|ref|XP_003561864.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 8-like
[Brachypodium distachyon]
Length = 169
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/136 (77%), Positives = 118/136 (86%), Gaps = 3/136 (2%)
Query: 40 VKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGG 99
++VMTDEQ+E LRKQI++YA ICEQLVEMH++L+AHQD + AG RLGN+YCDPLM GG
Sbjct: 1 MEVMTDEQMEVLRKQISIYAIICEQLVEMHRALTAHQD-SIAGMRLGNLYCDPLMVHGG- 58
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
HKI+ARQRWTPT +QLQILESIFDQG GTPSKQKIK+IT ELSQHGQI ETNVYNWFQNR
Sbjct: 59 HKITARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQI-ETNVYNWFQNR 117
Query: 160 RARSKRKQLVSSSANT 175
RARSKRKQ NT
Sbjct: 118 RARSKRKQAAFLPNNT 133
>gi|195623526|gb|ACG33593.1| WUSCHEL-related homeobox 14 [Zea mays]
Length = 273
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 157/267 (58%), Gaps = 39/267 (14%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGG 98
YVKVMTDEQ+E LRKQI++YATICEQLVEMH++L+ HQD AG R N+YCDP + GG
Sbjct: 31 YVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTEHQD-TIAGIRFSNLYCDPQIIPGG 89
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
HKI+ARQRW PTP+QLQILE+IFDQG GTPSKQ+IKEIT ELS HGQISETNVYNWFQN
Sbjct: 90 -HKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSHHGQISETNVYNWFQN 148
Query: 159 RRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEH----KTTKPE 214
RRARS RKQ S N +E E EVD L D+ ++ +
Sbjct: 149 RRARSNRKQAASLPNN------------------AESEAEVDEESLTDKKPKSDRSLQDN 190
Query: 215 NLSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHT-----PADISSSQLHFLGVFSNNPRK 269
AH+ + + +L D M + + SS Q+ F G NPR
Sbjct: 191 KAMGAHNADRISGMHHLDTD---HDQIGGMMYGCNDNGLRSSGSSGQMSFYGNIMPNPR- 246
Query: 270 MGGMPG------SYNLYDHAEDYSMAG 290
+ PG S++ H E + M G
Sbjct: 247 IDHFPGKVESSRSFSHLQHGEGFDMFG 273
>gi|194698924|gb|ACF83546.1| unknown [Zea mays]
gi|413952113|gb|AFW84762.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 308
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 117/161 (72%), Gaps = 26/161 (16%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAA----------------- 81
YVKVMTDEQ+E LRKQI++YATICEQLVEMH+ L+ HQD A
Sbjct: 29 YVKVMTDEQMEVLRKQISIYATICEQLVEMHRVLTEHQDTIAGFIHRCCLLVFCSNYVVS 88
Query: 82 --------GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQK 133
G R N+YCDPL+ GG HKI+ARQRW PTP+QLQILESIFDQG GTPSKQK
Sbjct: 89 LLHLVKSEGLRFSNLYCDPLIIPGG-HKITARQRWQPTPMQLQILESIFDQGNGTPSKQK 147
Query: 134 IKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
IKEIT ELSQHGQISETNVYNWFQNRRARSKRKQ +S N
Sbjct: 148 IKEITAELSQHGQISETNVYNWFQNRRARSKRKQAAASLPN 188
>gi|224065679|ref|XP_002301917.1| predicted protein [Populus trichocarpa]
gi|222843643|gb|EEE81190.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 158/257 (61%), Gaps = 53/257 (20%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G + VKVMTDEQ+E LRKQI+VYATICEQLVEMHK+LSA QD A G LGN YCDPL++
Sbjct: 10 GGLGVKVMTDEQMEMLRKQISVYATICEQLVEMHKALSAQQDFAGMG--LGNPYCDPLLS 67
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S HKI +RQRWTP P QLQILE IF+Q TP +QKIK+IT EL+QHGQISETNVYNW
Sbjct: 68 SAV-HKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQHGQISETNVYNW 126
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
FQNRRARSKRKQ SA +NG +SE+ET+++SL + K T+ E+
Sbjct: 127 FQNRRARSKRKQ----SAVVPNNG------------ESEMETDIESL----KEKKTRAED 166
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGM-- 273
SQP N P D M F++P DI QL MG +
Sbjct: 167 -------SQPDE--NTTPMA------DHMYFNSP-DIGFDQL------------MGKIES 198
Query: 274 PGSYNLYDHAEDYSMAG 290
PGS Y E Y + G
Sbjct: 199 PGSCIPYWQMEQYDLFG 215
>gi|3955019|emb|CAA09366.1| HB1 homeodomain protein [Populus tremula x Populus tremuloides]
Length = 217
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 158/259 (61%), Gaps = 55/259 (21%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G + VKVMTDEQ+E LRKQI+VYATICEQLVEMHK++SA QD A G LGN YCDPL++
Sbjct: 10 GGLGVKVMTDEQMEMLRKQISVYATICEQLVEMHKAVSAQQDFAGMG--LGNPYCDPLLS 67
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S HKI +RQRWTP P QLQILE IF+Q TP +QKIK+IT EL+QHGQISETNVYNW
Sbjct: 68 SAV-HKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQHGQISETNVYNW 126
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
FQNRRARSKRKQ SA +NG +SE+ET+++SL + K T+ E+
Sbjct: 127 FQNRRARSKRKQ----SAVVPNNG------------ESEMETDIESL----KEKKTRAED 166
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGM-- 273
SQP N P D M F++P DI QL MG +
Sbjct: 167 -------SQPDE--NTTPMA------DHMYFNSP-DIGFDQL------------MGKIES 198
Query: 274 --PGSYNLYDHAEDYSMAG 290
PGS Y E Y + G
Sbjct: 199 PGPGSCIPYWQMEQYDLFG 217
>gi|224083324|ref|XP_002306983.1| predicted protein [Populus trichocarpa]
gi|222856432|gb|EEE93979.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 155/258 (60%), Gaps = 54/258 (20%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIY-CDPLM 94
G + VKVMTDEQ+E LRKQI+VYATICEQLVEMHK+LS HQD A G RLGN Y CDPL+
Sbjct: 10 GGLGVKVMTDEQMEMLRKQISVYATICEQLVEMHKALSVHQDFA--GMRLGNPYFCDPLL 67
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+S HKI +RQRWTP P QL+ILE IF Q TP +QKIK+IT EL+QHGQISETNVYN
Sbjct: 68 SSSV-HKIGSRQRWTPKPAQLEILEQIFKQCNATPGRQKIKDITKELAQHGQISETNVYN 126
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPE 214
WFQNRRARSKRKQ + L N G +SEVETE++ + K TKPE
Sbjct: 127 WFQNRRARSKRKQ-----SALLPNSG-----------ESEVETEIEPF----KEKKTKPE 166
Query: 215 NLSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGM- 273
+ +QP TP D M H+P DI QL +G M
Sbjct: 167 D-------NQPDE----DATPV----SDHMYLHSP-DIGIDQL------------VGKME 198
Query: 274 -PGSYNLYDHAEDYSMAG 290
PGS Y E Y + G
Sbjct: 199 SPGSCIPYWQLEQYDLFG 216
>gi|40233067|gb|AAR83340.1| homeodomain protein HB1 [Populus tomentosa]
gi|40233103|gb|AAR83342.1| homeodomain protein HB1 [Populus tomentosa]
Length = 217
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 156/259 (60%), Gaps = 55/259 (21%)
Query: 36 GVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMT 95
G + KVMTDEQ+E LRKQI+VYATICEQLVEMHK +SA QD A G LGN YCDPL++
Sbjct: 10 GGLGAKVMTDEQMEMLRKQISVYATICEQLVEMHKVVSAQQDFAGMG--LGNPYCDPLLS 67
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S HKI +RQRWTP P QLQILE IF+Q TP +QKIK+IT EL+QHGQISETNVYNW
Sbjct: 68 SAV-HKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQHGQISETNVYNW 126
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
FQNRRARSKRKQ SA +NG +SE+ET+++SL + K T+ E+
Sbjct: 127 FQNRRARSKRKQ----SAVVPNNG------------ESEMETDIESL----KEKKTRAED 166
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQLHFLGVFSNNPRKMGGM-- 273
SQP N P D M F++P DI QL MG +
Sbjct: 167 -------SQPDE--NTTPMA------DHMYFNSP-DIGFDQL------------MGKIES 198
Query: 274 --PGSYNLYDHAEDYSMAG 290
PGS Y E Y + G
Sbjct: 199 PGPGSCIPYWQMEQYDLFG 217
>gi|30686974|ref|NP_173493.2| WUSCHEL-related homeobox 14 [Arabidopsis thaliana]
gi|61217651|sp|Q9LM84.1|WOX14_ARATH RecName: Full=WUSCHEL-related homeobox 14; AltName:
Full=Homeodomain protein PALE-2; Short=AtPALE2
gi|8886930|gb|AAF80616.1|AC069251_9 F2D10.19 [Arabidopsis thaliana]
gi|20152544|emb|CAD29665.1| homeodomain protein PALE-2 [Arabidopsis thaliana]
gi|332191891|gb|AEE30012.1| WUSCHEL-related homeobox 14 [Arabidopsis thaliana]
Length = 211
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 111/145 (76%)
Query: 30 NNNVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIY 89
+ + NG +VMT+EQ+E LRKQIAVYA IC+QLV +H SLS++ L++ + Y
Sbjct: 18 DREIQNGAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGY 77
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
DP+ S H+IS R RWTPT QLQILESI+D+G+GTP++++I+EI ELS+HGQI+E
Sbjct: 78 FDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITE 137
Query: 150 TNVYNWFQNRRARSKRKQLVSSSAN 174
TNVYNWFQNRRARSKRKQ +++AN
Sbjct: 138 TNVYNWFQNRRARSKRKQPQTTTAN 162
>gi|297845044|ref|XP_002890403.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336245|gb|EFH66662.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 109/140 (77%)
Query: 35 NGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLM 94
NG +VMT+EQ+E LRKQIAVYA IC+QLV +H SLS+ L++ + Y DP+
Sbjct: 18 NGAYNGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSFNPLSSGVRPVVGGYFDPMG 77
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
TS H+IS R RWTPT QLQILESI+++G+GTP++++I+EI ELS+HGQI+ETNVYN
Sbjct: 78 TSSSSHRISTRHRWTPTSTQLQILESIYEEGSGTPNRRRIREIATELSEHGQITETNVYN 137
Query: 155 WFQNRRARSKRKQLVSSSAN 174
WFQNRRARSKRKQ +++AN
Sbjct: 138 WFQNRRARSKRKQPQTTTAN 157
>gi|116789210|gb|ABK25160.1| unknown [Picea sitchensis]
Length = 367
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 118/186 (63%), Gaps = 15/186 (8%)
Query: 41 KVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGH 100
+VMTDEQ+ETLR+QI VY+TIC QLVEMH+++S Q + +G L G
Sbjct: 22 QVMTDEQMETLRRQICVYSTICSQLVEMHRAMSQQQPSSVPTLLMGQHMLYDLAQGNPGF 81
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ SARQRWTP+ QLQILE++F+QG TPSKQKIKEIT+ELSQHGQISETNVYNWFQNR+
Sbjct: 82 RASARQRWTPSQTQLQILENLFEQGHATPSKQKIKEITMELSQHGQISETNVYNWFQNRK 141
Query: 161 ARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAH 220
AR+KRKQL S G +++E + E + + +N S H
Sbjct: 142 ARAKRKQLPSQR---------------GGESENETDDEYPGEKRFKPQRDSNAQNPKSGH 186
Query: 221 STSQPQ 226
S + PQ
Sbjct: 187 SEADPQ 192
>gi|357503067|ref|XP_003621822.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355496837|gb|AES78040.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 183
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 125/197 (63%), Gaps = 45/197 (22%)
Query: 23 QRGGENDNNNVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAG 82
QR G N N NV G+M V VMT+EQ+ETLRKQIAVY+ I EQL++ HK+LS+ QDL G
Sbjct: 4 QRNGFNQNANV--GMMQVNVMTNEQVETLRKQIAVYSVISEQLIQTHKTLSSQQDLTLTG 61
Query: 83 G-RLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
RL RQRWTPTPVQLQ LE IF+ TGTPSK+KIKEIT +L
Sbjct: 62 STRL-------------------RQRWTPTPVQLQSLERIFEAETGTPSKEKIKEITADL 102
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDS 201
++HGQISET+VYNWFQNRRARSK KQ N +++ + EVETEVDS
Sbjct: 103 TKHGQISETSVYNWFQNRRARSKGKQ-----QNNVND-------------EPEVETEVDS 144
Query: 202 LLLHDEHKTTKPENLSS 218
K T+PE ++S
Sbjct: 145 -----NDKKTEPEIVAS 156
>gi|168009999|ref|XP_001757692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690968|gb|EDQ77332.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 102/126 (80%), Gaps = 3/126 (2%)
Query: 42 VMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHK 101
VMT+EQLETLR+QI+VYATIC+QLVEMHK+ + Q AGG++ ++ MT HK
Sbjct: 1 VMTEEQLETLRRQISVYATICQQLVEMHKASVSQQASLPAGGQIVSM---DQMTGTPTHK 57
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ARQRWTP+ QLQILE +F+QG+GTP+K +IKEIT ELSQHG ISETNVYNWFQNR+A
Sbjct: 58 STARQRWTPSQHQLQILEKLFEQGSGTPNKVRIKEITAELSQHGAISETNVYNWFQNRKA 117
Query: 162 RSKRKQ 167
R+KRKQ
Sbjct: 118 RAKRKQ 123
>gi|168050374|ref|XP_001777634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670977|gb|EDQ57536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 101/127 (79%), Gaps = 3/127 (2%)
Query: 41 KVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGH 100
+VMT+EQLETLR+QI+VYATIC+QLVEMHK+ S Q + G G I +T H
Sbjct: 1 QVMTEEQLETLRRQISVYATICQQLVEMHKA-SVSQQASLPG--YGQIVSMDHLTGTPPH 57
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
K +ARQRWTP+ QLQILE +F+QG+GTP+KQ+IKEIT ELSQHG ISETNVYNWFQNR+
Sbjct: 58 KSTARQRWTPSQHQLQILEKLFEQGSGTPNKQRIKEITAELSQHGAISETNVYNWFQNRK 117
Query: 161 ARSKRKQ 167
AR+KRKQ
Sbjct: 118 ARAKRKQ 124
>gi|442968880|dbj|BAM76366.1| WUSCHEL-related homeobox protein 13A [Physcomitrella patens subsp.
patens]
Length = 231
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 101/127 (79%), Gaps = 4/127 (3%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRL--GNIYCDPLMTSGGGH 100
MT+EQLETLR+QI+VYATIC+QLVEMHK+ + Q A+ G L G I +T H
Sbjct: 1 MTEEQLETLRRQISVYATICQQLVEMHKASVSQQ--ASLPGILASGQIVSMDHLTGTPPH 58
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
K +ARQRWTP+ QLQILE +F+QG+GTP+KQ+IKEIT ELSQHG ISETNVYNWFQNR+
Sbjct: 59 KSTARQRWTPSQHQLQILEKLFEQGSGTPNKQRIKEITAELSQHGAISETNVYNWFQNRK 118
Query: 161 ARSKRKQ 167
AR+KRKQ
Sbjct: 119 ARAKRKQ 125
>gi|255539254|ref|XP_002510692.1| DNA binding protein, putative [Ricinus communis]
gi|223551393|gb|EEF52879.1| DNA binding protein, putative [Ricinus communis]
Length = 231
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 96/128 (75%), Gaps = 3/128 (2%)
Query: 40 VKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGG 99
VKVMTD+Q+ETLRKQI+VYATICE LV+MHK++S D + G RL N Y P S
Sbjct: 18 VKVMTDDQMETLRKQISVYATICESLVQMHKAISDQNDFS--GMRLQNPYAGPFF-SYTL 74
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
+KI +RQRW P QL+ILESIF Q TP +Q+IKEI +LS HG ISETNVYNWFQNR
Sbjct: 75 NKIPSRQRWAPKAEQLEILESIFTQSKATPGRQRIKEIATQLSLHGPISETNVYNWFQNR 134
Query: 160 RARSKRKQ 167
RARSKRKQ
Sbjct: 135 RARSKRKQ 142
>gi|302757980|ref|XP_002962413.1| hypothetical protein SELMODRAFT_404178 [Selaginella moellendorffii]
gi|302764406|ref|XP_002965624.1| hypothetical protein SELMODRAFT_407157 [Selaginella moellendorffii]
gi|300166438|gb|EFJ33044.1| hypothetical protein SELMODRAFT_407157 [Selaginella moellendorffii]
gi|300169274|gb|EFJ35876.1| hypothetical protein SELMODRAFT_404178 [Selaginella moellendorffii]
Length = 342
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 122/193 (63%), Gaps = 26/193 (13%)
Query: 41 KVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGN----IYCDPLMTS 96
+VMT+EQLETLR+QI+VYATIC+QLVEMHK+ +HQ G LG+ I M
Sbjct: 91 QVMTEEQLETLRRQISVYATICQQLVEMHKATISHQH-TYNGLLLGHQSPAIQDSSPMLL 149
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G HK ++RQRWTP+ QL+ILE +F QG GTP++Q+IKEIT ELSQHGQISETNVYNWF
Sbjct: 150 GIHHKPTSRQRWTPSQNQLRILERLFKQGNGTPNRQRIKEITSELSQHGQISETNVYNWF 209
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGA---GGADSEVETEVDSLLLHDEHKTTKP 213
QNR+AR+KRKQ HN + A+SEVET+ D P
Sbjct: 210 QNRKARAKRKQ--------RHNNATPSTTTTSSQHKDAESEVETDGDH----------SP 251
Query: 214 ENLSSAHSTSQPQ 226
E S S+S PQ
Sbjct: 252 EEKRSKVSSSTPQ 264
>gi|442968885|dbj|BAM76367.1| WUSCHEL-related homeobox protein 13B [Physcomitrella patens subsp.
patens]
Length = 231
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRL--GNIYCDPLMTSGGGH 100
MT+EQLETLR+QI+VYATIC+QLVEMHK+ + Q A+ G L G I MT H
Sbjct: 1 MTEEQLETLRRQISVYATICQQLVEMHKASVSQQ--ASLPGILAGGQIVSMDQMTGTPTH 58
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
K +ARQRWTP+ QLQILE +F+QG+GTP+K +IKEIT ELSQHG ISETNVYNWFQNR+
Sbjct: 59 KSTARQRWTPSQHQLQILEKLFEQGSGTPNKVRIKEITAELSQHGAISETNVYNWFQNRK 118
Query: 161 ARSKRKQ 167
AR+KRKQ
Sbjct: 119 ARAKRKQ 125
>gi|297845046|ref|XP_002890404.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336246|gb|EFH66663.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 105/134 (78%)
Query: 34 VNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPL 93
+NG +VMT+EQ+E LRKQIA+YA +C+QLV +H SLS+ L++ +G Y DP+
Sbjct: 6 LNGTFDDRVMTEEQMEALRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNSMGGGYFDPM 65
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
+ S H +S R RWTPT +QLQILE+I+ +G+GTP+ ++IKEIT+ELS+HG+I+E +VY
Sbjct: 66 VASSSAHGMSTRHRWTPTSMQLQILENIYKEGSGTPNPRRIKEITMELSEHGEITEKSVY 125
Query: 154 NWFQNRRARSKRKQ 167
NWFQNRRARSKRKQ
Sbjct: 126 NWFQNRRARSKRKQ 139
>gi|380848542|emb|CBX45504.1| hypothetical protein [Ceratopteris richardii]
Length = 351
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 99/133 (74%), Gaps = 10/133 (7%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQ----DLAAAGGRLGNIYCDPLM 94
Y VMTDEQ E LR+QI+VY+TIC QLVEMHK+L Q ++A G+ + DP++
Sbjct: 65 YGCVMTDEQFEMLRRQISVYSTICNQLVEMHKALMTQQAFIPNMALVPGQ--QLPLDPVL 122
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+ + + RQRWTP+ QLQILES+F+ GTPSKQKIKEIT+EL +HG ISETNVYN
Sbjct: 123 VA----RSNGRQRWTPSQSQLQILESVFETSVGTPSKQKIKEITMELGKHGPISETNVYN 178
Query: 155 WFQNRRARSKRKQ 167
WFQNR+AR+KRKQ
Sbjct: 179 WFQNRKARAKRKQ 191
>gi|15218015|ref|NP_173494.1| putative WUSCHEL-related homeobox 10 [Arabidopsis thaliana]
gi|61217650|sp|Q9LM83.1|WOX10_ARATH RecName: Full=Putative WUSCHEL-related homeobox 10
gi|8886931|gb|AAF80617.1|AC069251_10 F2D10.20 [Arabidopsis thaliana]
gi|332191892|gb|AEE30013.1| putative WUSCHEL-related homeobox 10 [Arabidopsis thaliana]
Length = 197
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 103/134 (76%)
Query: 34 VNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPL 93
+NG +VMTDEQ+ETLRKQIA+YA +C+QLV +H SLS+ L++ + Y DP+
Sbjct: 6 LNGRYGSRVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPM 65
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
+ S H +S R RWTPT QLQILE+I+ +G+GTP+ ++IKEIT+ELS+HGQI E NVY
Sbjct: 66 VASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVY 125
Query: 154 NWFQNRRARSKRKQ 167
+WFQNRRARSKRKQ
Sbjct: 126 HWFQNRRARSKRKQ 139
>gi|116811092|emb|CAJ84154.1| WOX13 protein [Populus trichocarpa]
Length = 65
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ARQRWTPTPVQLQILE IFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRAR 60
Query: 163 SKRKQ 167
SKRKQ
Sbjct: 61 SKRKQ 65
>gi|116811094|emb|CAJ84169.1| WOX13B protein [Zea mays]
Length = 65
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/65 (92%), Positives = 62/65 (95%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ARQRW PTP+QLQILESIFDQG GTPSKQKIKEIT ELSQHGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWQPTPMQLQILESIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRAR 60
Query: 163 SKRKQ 167
SKRKQ
Sbjct: 61 SKRKQ 65
>gi|116811078|emb|CAJ84147.1| WOX13 protein [Oryza sativa]
Length = 65
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 63/65 (96%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ARQRWTPTP+QLQILE+IFDQG GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRAR 60
Query: 163 SKRKQ 167
SKRKQ
Sbjct: 61 SKRKQ 65
>gi|89330219|emb|CAJ84168.1| WOX13A protein [Zea mays]
Length = 65
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/65 (87%), Positives = 61/65 (93%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ARQRW PTP+QLQILE+IFDQG GTPSKQ+IKEIT ELS HGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSHHGQISETNVYNWFQNRRAR 60
Query: 163 SKRKQ 167
SKRKQ
Sbjct: 61 SKRKQ 65
>gi|380848544|emb|CBX45505.1| hypothetical protein [Ceratopteris richardii]
Length = 183
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 18/103 (17%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
G K ++RQRWTP+ QLQILE +F QG G PS+Q+IKEI ELSQ+GQISETNVYNWFQN
Sbjct: 16 GQKFTSRQRWTPSQTQLQILEKLFQQGNGAPSRQRIKEICAELSQYGQISETNVYNWFQN 75
Query: 159 RRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDS 201
RRAR+KRKQ G +SE++T+VDS
Sbjct: 76 RRARTKRKQ------------------QGVANGESELDTDVDS 100
>gi|302787372|ref|XP_002975456.1| hypothetical protein SELMODRAFT_451355 [Selaginella moellendorffii]
gi|300157030|gb|EFJ23657.1| hypothetical protein SELMODRAFT_451355 [Selaginella moellendorffii]
Length = 242
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Query: 42 VMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGH- 100
VM+ +QL+ LR+QIAVYATIC+QLVEMHK+ A+ + A++ P
Sbjct: 51 VMSAQQLDELRRQIAVYATICQQLVEMHKASMANPNGASSSRPPPPSPLPPPPLPPPPPV 110
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
K + RQRW P+ Q+++LES++D G GTP KQ+++EIT ELSQ G ++E+NVYNWFQN
Sbjct: 111 KATTRQRWAPSQAQVKLLESLYDVGMGTPHKQRVREITAELSQLGPVNESNVYNWFQN 168
>gi|302761286|ref|XP_002964065.1| hypothetical protein SELMODRAFT_438787 [Selaginella moellendorffii]
gi|300167794|gb|EFJ34398.1| hypothetical protein SELMODRAFT_438787 [Selaginella moellendorffii]
Length = 246
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
Query: 42 VMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHK 101
VM+ +QL+ LR+QIAVYATIC+QLVEMHK+ A+ + ++ P + K
Sbjct: 51 VMSAQQLDELRRQIAVYATICQQLVEMHKASMANPNGTSSSRPPPPSPLPPPV------K 104
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
+ RQRW P+ Q+++LES++D G GTP KQ+++EIT ELSQ G ++E+NVYNWFQN
Sbjct: 105 ATTRQRWAPSQAQVKLLESLYDVGMGTPHKQRVREITAELSQLGPVNESNVYNWFQN 161
>gi|255577271|ref|XP_002529517.1| hypothetical protein RCOM_1715600 [Ricinus communis]
gi|223531001|gb|EEF32855.1| hypothetical protein RCOM_1715600 [Ricinus communis]
Length = 53
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 49/56 (87%), Gaps = 3/56 (5%)
Query: 68 MHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD 123
MHK+LSA QDL GGRLGN+YCDPLMTSG HKI+ARQRWTPTPVQLQILE IFD
Sbjct: 1 MHKTLSAQQDLV--GGRLGNLYCDPLMTSGR-HKITARQRWTPTPVQLQILERIFD 53
>gi|308810595|ref|XP_003082606.1| HB2 homeodomain protein (ISS) [Ostreococcus tauri]
gi|116061075|emb|CAL56463.1| HB2 homeodomain protein (ISS) [Ostreococcus tauri]
Length = 203
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 25/152 (16%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSA-----------HQDLAAAGGRLGNIY-- 89
MT+ QL R+QIA YA IC+QL+++ ++SA H+ A G G
Sbjct: 50 MTERQLYAFRQQIAAYAHICQQLLQI-TTVSATQQTPRQREMRHEVPGATGANWGASVPV 108
Query: 90 ----CDPLMTSG-------GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT 138
PL +S G K + RWT TP Q +ILE +F +G P + ++ E+T
Sbjct: 109 TAPASAPLSSSNHSSGKTRGEDKQARGPRWTGTPTQYEILEDLFQKGEQPPVRDRLTELT 168
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L QHG + E+NVYNWFQNRR+R K+ Q ++
Sbjct: 169 EMLKQHGPVQESNVYNWFQNRRSREKKLQAMA 200
>gi|255079344|ref|XP_002503252.1| predicted protein [Micromonas sp. RCC299]
gi|226518518|gb|ACO64510.1| predicted protein [Micromonas sp. RCC299]
Length = 190
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Query: 42 VMTDEQLETLRKQIAVYATICEQLVEM-----HKSLSAHQ---DLAAAGGRLG------- 86
MT QL+TLR QIA ++ +CEQ + +S HQ LAA +G
Sbjct: 41 AMTWTQLDTLRHQIAAFSHLCEQRALLTQQIYEESKPGHQRSQTLAAIANSIGVSAAGSQ 100
Query: 87 NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ 146
Y P+ + GG AR WTP+ QL LE +F G GTP+ +IT EL++ G
Sbjct: 101 PSYPGPVYSKGGDGPRGAR--WTPSAAQLARLEELFATGMGTPNGDLRTKITDELAKLGP 158
Query: 147 ISETNVYNWFQNRRARSKRKQLVSSSAN 174
++E NVYNWFQN++AR+K+K L +A
Sbjct: 159 VNEANVYNWFQNKKARTKKKLLEEQAAK 186
>gi|168049453|ref|XP_001777177.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671405|gb|EDQ57957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTG-TPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R RW+ QLQ LESIF+QG G TP+K +IK+IT+EL+Q G ISETNVYNWFQNR+AR+
Sbjct: 14 RSRWSANQQQLQNLESIFEQGNGNTPNKARIKDITIELNQFGHISETNVYNWFQNRKARA 73
Query: 164 KRK 166
KRK
Sbjct: 74 KRK 76
>gi|229359301|emb|CAT02909.1| putative wuschel homeobox protein WOX13 [Ginkgo biloba]
Length = 46
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
TP+QLQILE+IF+QG GTPSKQKIKEIT EL+QHGQISETNVYNWF
Sbjct: 1 TPMQLQILENIFEQGNGTPSKQKIKEITAELAQHGQISETNVYNWF 46
>gi|303283958|ref|XP_003061270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457621|gb|EEH54920.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 202
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 26/151 (17%)
Query: 43 MTDEQLETLRKQIAVYATIC-------EQLVEMHKS------------------LSAHQD 77
+T QL+TLR QIA ++ +C +Q VE KS LS+
Sbjct: 37 LTPTQLDTLRHQIAAFSHVCNQAIILAQQKVEEGKSFNAPGNSLPGRGAGVMHALSSSMG 96
Query: 78 LAAAGGRLGNIYCDPLMTSGG-GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
++A+G Y P+ G + + RW PTP QL LE +F G GTP+ + +
Sbjct: 97 ISASGAGAQPSYPAPVYNKNPDGPRGPSAPRWNPTPAQLARLEELFLTGMGTPNGELRTQ 156
Query: 137 ITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
IT EL++ G I+E NVYNWFQN++AR K+ +
Sbjct: 157 ITEELAKLGPINEANVYNWFQNKKARMKKAE 187
>gi|229359351|emb|CAT02934.1| putative wuschel homeobox protein WOX13 [Pinus sylvestris]
Length = 50
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 43/50 (86%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
QR TP+ VQLQILE IFDQ GTPSKQKIKEIT ELSQHG ISETNVYNW
Sbjct: 1 QRGTPSQVQLQILEKIFDQDKGTPSKQKIKEITAELSQHGHISETNVYNW 50
>gi|412985378|emb|CCO18824.1| predicted protein [Bathycoccus prasinos]
Length = 448
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 24/149 (16%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEM-HKS------LSAHQDLAAAGGRLGNIYCD---- 91
MT++Q LR+QIA YA IC+QL+++ H++ +SA + + Y
Sbjct: 270 MTEQQKYALRQQIASYAHICQQLLQLTHEAALRDLQMSARGEYDRHATHASSAYPREKQP 329
Query: 92 -------------PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT 138
+ ++ G + + + RW PT Q + LE +F T TP ++ +K++T
Sbjct: 330 KKEKPHKERKTPASIFSNTGVYSVPGKVRWQPTTAQFERLEQLFAIDTTTPQRENLKQVT 389
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQ 167
ELS G I E NVYNWFQN++AR K+++
Sbjct: 390 EELSALGPIQECNVYNWFQNKKARLKKRE 418
>gi|359802457|emb|CBX45506.1| hypothetical protein [Ceratopteris richardii]
Length = 311
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ R RWTPT Q+QILESIF+ GT TPS+ I +I +L +G I E NV+ WFQNR+AR
Sbjct: 221 TPRPRWTPTQEQIQILESIFNSGTTTPSRDMIVDIAAQLRNYGNIGEANVFYWFQNRKAR 280
Query: 163 SKRK 166
+KRK
Sbjct: 281 AKRK 284
>gi|145353257|ref|XP_001420936.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581172|gb|ABO99229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 34/165 (20%)
Query: 43 MTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDL-----------AAAGGRLG----- 86
MT+ QL R+QIA YA IC+QL+++ ++SA Q +AG G
Sbjct: 25 MTERQLYAFRQQIAAYAHICQQLLQI-TTVSATQQTPRQREARYEVPGSAGAHAGANASA 83
Query: 87 -----------------NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTP 129
Y + G K RW+ TP Q +ILE +F G P
Sbjct: 84 QAFAAMAASGTANAQQRKTYEEGQRVGRGEDKGVRGPRWSGTPDQYKILEDLFLAGEQPP 143
Query: 130 SKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
+ ++ EIT L +HG I E NVYNWFQNRR+R K++ ++N
Sbjct: 144 VRARLTEITKRLQEHGPIQEHNVYNWFQNRRSREKKRLAEERASN 188
>gi|169667041|gb|ACA64093.1| MAEWEST protein [Petunia x hybrida]
Length = 376
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 16/106 (15%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QLQ LE ++ +GT TPS ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 138
Query: 167 QLVSSSANTLHNGGGG----------------GAGAGAGGADSEVE 196
+ +N ++GGGG +GAGA E+E
Sbjct: 139 RRRQLESNAANDGGGGDEQSRNNCNVENAERKDSGAGANRTGFEIE 184
>gi|359802459|emb|CBX45507.1| hypothetical protein [Ceratopteris richardii]
Length = 213
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
TSG + R RW PTP Q+ +LE++F+ GT TP++ I +I L+Q G I E NV+
Sbjct: 101 TSGA---CTPRTRWCPTPEQINVLETLFNSGTTTPTRAMIVDIASCLNQFGSIVEANVFY 157
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGA 191
WFQNR+AR+KRK + + LH G A +
Sbjct: 158 WFQNRKARAKRKLRMQAQ---LHQESAGATSISASSS 191
>gi|160221318|sp|Q0JKK6.2|WOX7_ORYSJ RecName: Full=WUSCHEL-related homeobox 7; AltName: Full=OsWOX7
gi|218188810|gb|EEC71237.1| hypothetical protein OsI_03193 [Oryza sativa Indica Group]
Length = 533
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I ++L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 67 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSK 126
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGG 190
N L +GG G AG G GG
Sbjct: 127 ---------NKLRSGGTGRAGLGLGG 143
>gi|229359319|emb|CAT02918.1| putative wuschel homeobox protein WOX13 [Amborella trichopoda]
Length = 46
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 43/46 (93%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
TP+QLQILES+F QG+GTP+KQKIKEIT EL+QHG I+E+NVYNWF
Sbjct: 1 TPMQLQILESLFIQGSGTPTKQKIKEITSELTQHGPITESNVYNWF 46
>gi|222619016|gb|EEE55148.1| hypothetical protein OsJ_02944 [Oryza sativa Japonica Group]
Length = 515
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I ++L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 67 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSK 126
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGG 190
N L +GG G AG G GG
Sbjct: 127 ---------NKLRSGGTGRAGLGLGG 143
>gi|159232354|emb|CAM32350.1| putative wuschel homeobox protein [Zea mays]
Length = 402
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 85 LGNIYCDPLMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELS 142
+G PL GG K + + RW P P Q++ILE+IF+ G P + +I I + L
Sbjct: 50 IGRCLKHPLSGYSGGEKRTPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQ 109
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
++GQ+ + NV+ WFQNR++RSK KQ L G GA A
Sbjct: 110 EYGQVGDANVFYWFQNRKSRSKNKQRTGQLGLGLARAPGCGAAA 153
>gi|143023715|gb|ABO93066.1| EVERGREEN [Petunia x hybrida]
Length = 345
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 14/89 (15%)
Query: 93 LMTSGGGHKISA--------------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT 138
LM++GG +K +QRW P P Q++ILE+IF+ G P + +I++I
Sbjct: 31 LMSAGGCNKAPCTSVPAICEERSPEPKQRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIR 90
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQ 167
++L + GQ+ + NV+ WFQNR++RSK KQ
Sbjct: 91 IKLQEFGQVGDANVFYWFQNRKSRSKHKQ 119
>gi|356546191|ref|XP_003541514.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 389
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 92 PLMTSGGGHKI-SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
P SGG + + RW P P Q++ILE+IF+ G P + +I++I V+L ++GQ+ +
Sbjct: 41 PYANSGGDERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDA 100
Query: 151 NVYNWFQNRRARSKRK 166
NV+ WFQNR++RSK K
Sbjct: 101 NVFYWFQNRKSRSKHK 116
>gi|297794657|ref|XP_002865213.1| hypothetical protein ARALYDRAFT_916845 [Arabidopsis lyrata subsp.
lyrata]
gi|297311048|gb|EFH41472.1| hypothetical protein ARALYDRAFT_916845 [Arabidopsis lyrata subsp.
lyrata]
Length = 328
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R+K
Sbjct: 52 KPRWNPKPEQIRILESIFNSGTVNPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 111
Query: 165 RKQLV 169
K V
Sbjct: 112 HKLRV 116
>gi|79530393|ref|NP_199410.2| WUSCHEL-related homeobox 8 [Arabidopsis thaliana]
gi|61217284|sp|Q6X7J5.1|WOX8_ARATH RecName: Full=WUSCHEL-related homeobox 8
gi|37955180|gb|AAP37138.1| WOX8 protein [Arabidopsis thaliana]
gi|332007940|gb|AED95323.1| WUSCHEL-related homeobox 8 [Arabidopsis thaliana]
Length = 325
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R+K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 165 RKQLV 169
K V
Sbjct: 113 HKLRV 117
>gi|219888053|gb|ACL54401.1| unknown [Zea mays]
Length = 514
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 85 LGNIYCDPLMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELS 142
+G PL GG + + + RW P P Q++ILE+IF+ G P + +I I + L
Sbjct: 50 IGRCLKHPLSGYSGGEERTPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQ 109
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
++GQ+ + NV+ WFQNR++RSK KQ L G GA A
Sbjct: 110 EYGQVGDANVFYWFQNRKSRSKNKQRTGQLGLGLARAPGCGAAA 153
>gi|413950852|gb|AFW83501.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 514
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 85 LGNIYCDPLMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELS 142
+G PL GG + + + RW P P Q++ILE+IF+ G P + +I I + L
Sbjct: 50 IGRCLKHPLSGYSGGEERTPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQ 109
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
++GQ+ + NV+ WFQNR++RSK KQ L G GA A
Sbjct: 110 EYGQVGDANVFYWFQNRKSRSKNKQRTGQLGLGLARAPGCGAAA 153
>gi|18419580|gb|AAL69362.1|AF462199_1 putative homeobox-containing protein [Narcissus pseudonarcissus]
Length = 95
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Query: 131 KQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGG 190
KQKIKEIT++L QHGQ+SETNVYNWFQNRRARSKRKQ A L N A A
Sbjct: 1 KQKIKEITLKLVQHGQLSETNVYNWFQNRRARSKRKQ-----ATVLPNNNEPEAEAEFDS 55
Query: 191 ADSE 194
SE
Sbjct: 56 PPSE 59
>gi|143023740|gb|ABO93067.1| SISTER OF EVERGREEN [Petunia x hybrida]
Length = 391
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 54 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 113
Query: 165 RKQLVSSSAN--TLHN 178
KQ S+ N T HN
Sbjct: 114 HKQRQSTKVNQQTPHN 129
>gi|160221294|sp|A3BKM2.1|WOX13_ORYSJ RecName: Full=WUSCHEL-related homeobox 13; AltName: Full=OsWOX13;
AltName: Full=Protein WOX9
gi|125600535|gb|EAZ40111.1| hypothetical protein OsJ_24554 [Oryza sativa Japonica Group]
Length = 306
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
GG ++ P + G + R P P Q++ILE+IF+ G P + +I I ++L
Sbjct: 111 GGGGFSLKSSPFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQL 170
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGG 190
++GQ+ + NV+ WFQNR++RSK N L +GG G AG G GG
Sbjct: 171 QEYGQVGDANVFYWFQNRKSRSK---------NKLRSGGTGRAGLGLGG 210
>gi|9757718|dbj|BAB08243.1| unnamed protein product [Arabidopsis thaliana]
Length = 253
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R+K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 165 RKQLV 169
K V
Sbjct: 113 HKLRV 117
>gi|414881074|tpg|DAA58205.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 516
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L Q+GQ+ + NV+ WFQNR++RSK
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 165 RKQLVSSSANT 175
K L SS+A T
Sbjct: 130 NK-LRSSTAGT 139
>gi|414881075|tpg|DAA58206.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 515
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L Q+GQ+ + NV+ WFQNR++RSK
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 165 RKQLVSSSANT 175
K L SS+A T
Sbjct: 130 NK-LRSSTAGT 139
>gi|413950853|gb|AFW83502.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 525
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 83 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSK 142
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
KQ L G GA A
Sbjct: 143 NKQRTGQLGLGLARAPGCGAAA 164
>gi|356519629|ref|XP_003528473.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 415
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P + G + RW P P Q++ILE+IF+ G P + +I++I V+L ++GQ+ + N
Sbjct: 42 PYASGGEERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDAN 101
Query: 152 VYNWFQNRRARSKRK-QLVSSSANTLHNG 179
V+ WFQNR++RSK K + +S N HN
Sbjct: 102 VFYWFQNRKSRSKHKLRHFQNSMNQNHNA 130
>gi|50508276|dbj|BAD32125.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
Length = 478
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
GG ++ P + G + R P P Q++ILE+IF+ G P + +I I ++L
Sbjct: 217 GGGGFSLKSSPFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQL 276
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGG 190
++GQ+ + NV+ WFQNR++RSK N L +GG G AG G GG
Sbjct: 277 QEYGQVGDANVFYWFQNRKSRSK---------NKLRSGGTGRAGLGLGG 316
>gi|159232356|emb|CAM32351.1| putative wuschel homeobox protein [Zea mays]
Length = 524
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L Q+GQ+ + NV+ WFQNR++RSK
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 165 RKQLVSSSANT 175
K L SS+A T
Sbjct: 130 NK-LRSSTAAT 139
>gi|159232376|emb|CAM32361.1| putative wuschel homeobox protein [Brachypodium distachyon]
Length = 41
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 38/41 (92%), Gaps = 1/41 (2%)
Query: 116 QILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
QILESIFDQG GTPSKQKIK+IT ELSQHGQI ETNVYNWF
Sbjct: 1 QILESIFDQGNGTPSKQKIKDITAELSQHGQI-ETNVYNWF 40
>gi|357128495|ref|XP_003565908.1| PREDICTED: WUSCHEL-related homeobox 12-like [Brachypodium
distachyon]
Length = 416
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 93 LMTSGG---GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
L++SG G + RW+P P Q++ILE+IF+ G P + +I+ I L + G +++
Sbjct: 53 LLSSGMDQEGRSTETKARWSPRPEQIRILEAIFNAGVVNPPRDEIRRIRARLQEFGPVAD 112
Query: 150 TNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAG-----AGAGGADSEVETEVDSLLL 204
NV+ WFQNR++R+K HNGGG A + A AD S L
Sbjct: 113 ANVFYWFQNRKSRTK------------HNGGGKAASVVKPPSAAMAADLFAPLSGCSQLY 160
Query: 205 HDEHK--TTKPE 214
++ H T PE
Sbjct: 161 YNRHPMLTAAPE 172
>gi|242088843|ref|XP_002440254.1| hypothetical protein SORBIDRAFT_09g028562 [Sorghum bicolor]
gi|241945539|gb|EES18684.1| hypothetical protein SORBIDRAFT_09g028562 [Sorghum bicolor]
Length = 391
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG R RW P P Q++ILE IF+ G PS+ +I+ I ++L ++G + + NV+ WFQ
Sbjct: 29 GGRNPEPRPRWNPRPEQIRILEGIFNSGMVNPSRDEIRRIRLQLQEYGPVGDANVFYWFQ 88
Query: 158 NRRARSKRK 166
NR++R+K K
Sbjct: 89 NRKSRTKHK 97
>gi|449433782|ref|XP_004134676.1| PREDICTED: WUSCHEL-related homeobox 9-like [Cucumis sativus]
gi|449479259|ref|XP_004155551.1| PREDICTED: WUSCHEL-related homeobox 9-like [Cucumis sativus]
Length = 376
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 92 PLMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
P T GG + S + RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ +
Sbjct: 45 PYTTVGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGD 104
Query: 150 TNVYNWFQNRRARSKRK 166
NV+ WFQNR++RSK K
Sbjct: 105 ANVFYWFQNRKSRSKNK 121
>gi|124361149|gb|ABN09121.1| Homeodomain-related [Medicago truncatula]
Length = 432
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 93 LMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
L+T G G + + + RW P P Q++ILE+IF+ G P +++I +I +L + GQ+ +
Sbjct: 31 LLTGGDGEERTPEPKPRWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDA 90
Query: 151 NVYNWFQNRRARSKRKQ 167
NV+ WFQNR++RSK+K+
Sbjct: 91 NVFYWFQNRKSRSKQKK 107
>gi|402575784|gb|AFQ69082.1| LATHYROIDES [Pisum sativum]
Length = 373
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P M + + RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I N
Sbjct: 76 PEMNNPAAAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKN 135
Query: 152 VYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVE 196
V+ WFQN +AR ++K+ + +G G+ EVE
Sbjct: 136 VFYWFQNHKARERQKRRRQMESAAEFDGSLEKKDLGSSRTVFEVE 180
>gi|302769904|ref|XP_002968371.1| hypothetical protein SELMODRAFT_451358 [Selaginella moellendorffii]
gi|300164015|gb|EFJ30625.1| hypothetical protein SELMODRAFT_451358 [Selaginella moellendorffii]
Length = 315
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 16/98 (16%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
+ RW P QL++L +F++ + +KQ+IKEI V+L++ G ++E NV+NWF NR+AR+
Sbjct: 22 VKVRWKPNEEQLRMLVRLFEEEGDSINKQRIKEIAVDLARQGDVTEANVHNWFHNRKARA 81
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDS 201
KRKQ N G +SEV+T+VDS
Sbjct: 82 KRKQ-----KQMQQNDG-----------ESEVDTDVDS 103
>gi|363814326|ref|NP_001242805.1| uncharacterized protein LOC100804839 [Glycine max]
gi|255639317|gb|ACU19956.1| unknown [Glycine max]
Length = 403
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 92 PLMTSGGG---HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
P + GGG + RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+
Sbjct: 40 PYSSGGGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVG 99
Query: 149 ETNVYNWFQNRRARSKRK 166
+ NV+ WFQNR++RSK K
Sbjct: 100 DANVFYWFQNRKSRSKHK 117
>gi|357503259|ref|XP_003621918.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
gi|355496933|gb|AES78136.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
Length = 590
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 93 LMTSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
L+T G G + + + RW P P Q++ILE+IF+ G P +++I +I +L + GQ+ +
Sbjct: 31 LLTGGDGEERTPEPKPRWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDA 90
Query: 151 NVYNWFQNRRARSKRKQ 167
NV+ WFQNR++RSK+K+
Sbjct: 91 NVFYWFQNRKSRSKQKK 107
>gi|356548399|ref|XP_003542589.1| PREDICTED: WUSCHEL-related homeobox 9-like [Glycine max]
Length = 399
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 91 DPLMTSGGG---HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQI 147
P + GGG + RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+
Sbjct: 39 SPYSSGGGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQV 98
Query: 148 SETNVYNWFQNRRARSKRK--QLVSSSANTL 176
+ NV+ WFQNR++RSK K L +SS+ L
Sbjct: 99 GDANVFYWFQNRKSRSKHKLRHLQNSSSKNL 129
>gi|357446821|ref|XP_003593686.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355482734|gb|AES63937.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 457
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P +++I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 165 RK 166
K
Sbjct: 113 HK 114
>gi|413946525|gb|AFW79174.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG R RW P P Q++ILE IF+ G P + +I+ I ++L ++G + + NV+ WFQ
Sbjct: 46 GGRNPEPRPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQ 105
Query: 158 NRRARSKRK 166
NR++R+K K
Sbjct: 106 NRKSRTKHK 114
>gi|159232358|emb|CAM32352.1| putative wuschel homeobox protein [Zea mays]
gi|413946524|gb|AFW79173.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 506
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG R RW P P Q++ILE IF+ G P + +I+ I ++L ++G + + NV+ WFQ
Sbjct: 46 GGRNPEPRPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQ 105
Query: 158 NRRARSKRK 166
NR++R+K K
Sbjct: 106 NRKSRTKHK 114
>gi|294818270|gb|ADF42580.1| putative wuschel homeobox protein WOX8/9 [Picea abies]
Length = 274
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P QL+ILES+F+ G P + +IK I +L + GQ+ + NV+ WFQNR++R+K
Sbjct: 54 KPRWNPKPEQLRILESVFNSGMVNPPRDEIKRIRAQLQEFGQVGDANVFYWFQNRKSRTK 113
Query: 165 RKQ 167
++Q
Sbjct: 114 QRQ 116
>gi|160221321|sp|A3B6V0.2|WOX12_ORYSJ RecName: Full=WUSCHEL-related homeobox 12; AltName: Full=OsWOX12;
AltName: Full=Protein WOX9C
gi|218197276|gb|EEC79703.1| hypothetical protein OsI_20994 [Oryza sativa Indica Group]
gi|222632571|gb|EEE64703.1| hypothetical protein OsJ_19558 [Oryza sativa Japonica Group]
Length = 515
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 93 LMTSG---GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
L++SG G + RW P P Q++ILE IF+ G P + +I+ I ++L ++GQ+ +
Sbjct: 55 LLSSGCEEGTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGD 114
Query: 150 TNVYNWFQNRRARSKRK 166
NV+ WFQNR++R+K K
Sbjct: 115 ANVFYWFQNRKSRTKNK 131
>gi|302765042|ref|XP_002965942.1| hypothetical protein SELMODRAFT_451357 [Selaginella moellendorffii]
gi|300166756|gb|EFJ33362.1| hypothetical protein SELMODRAFT_451357 [Selaginella moellendorffii]
Length = 344
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 16/98 (16%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
+ RW P QL++L +F++ + +KQ+IKEI V+L++ G ++E NV+NWF NR+AR+
Sbjct: 26 VKVRWKPNEEQLRMLVRLFEEEGDSINKQRIKEIAVDLARQGDVTEANVHNWFHNRKARA 85
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDS 201
KRKQ N G +SEV+T+VDS
Sbjct: 86 KRKQ-----KQMQQNDG-----------ESEVDTDVDS 107
>gi|297826867|ref|XP_002881316.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327155|gb|EFH57575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 165 RK 166
K
Sbjct: 113 HK 114
>gi|350538129|ref|NP_001234072.1| compound inflorescence [Solanum lycopersicum]
gi|207083711|gb|ACI23247.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
gi|207083713|gb|ACI23248.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 358
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 49 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 108
Query: 165 RKQ 167
KQ
Sbjct: 109 HKQ 111
>gi|297740453|emb|CBI30635.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L + GQ+ + NV+ WFQNR++RSK
Sbjct: 55 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEFGQVGDANVFYWFQNRKSRSK 114
Query: 165 RKQ 167
KQ
Sbjct: 115 HKQ 117
>gi|297724327|ref|NP_001174527.1| Os05g0564500 [Oryza sativa Japonica Group]
gi|255676577|dbj|BAH93255.1| Os05g0564500 [Oryza sativa Japonica Group]
Length = 476
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 93 LMTSG---GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
L++SG G + RW P P Q++ILE IF+ G P + +I+ I ++L ++GQ+ +
Sbjct: 55 LLSSGCEEGTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGD 114
Query: 150 TNVYNWFQNRRARSKRK 166
NV+ WFQNR++R+K K
Sbjct: 115 ANVFYWFQNRKSRTKNK 131
>gi|30685885|ref|NP_180944.2| WUSCHEL-related homeobox 9 [Arabidopsis thaliana]
gi|61217281|sp|Q6X7J4.1|WOX9_ARATH RecName: Full=WUSCHEL-related homeobox 9
gi|37955182|gb|AAP37139.1| WOX9 protein [Arabidopsis thaliana]
gi|330253808|gb|AEC08902.1| WUSCHEL-related homeobox 9 [Arabidopsis thaliana]
Length = 378
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 165 RK 166
K
Sbjct: 113 HK 114
>gi|50511480|gb|AAT77402.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 821
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 93 LMTSG---GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
L++SG G + RW P P Q++ILE IF+ G P + +I+ I ++L ++GQ+ +
Sbjct: 55 LLSSGCEEGTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGD 114
Query: 150 TNVYNWFQNRRARSKRK 166
NV+ WFQNR++R+K K
Sbjct: 115 ANVFYWFQNRKSRTKNK 131
>gi|207083719|gb|ACI23251.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 251
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 24 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 83
Query: 165 RKQ 167
KQ
Sbjct: 84 HKQ 86
>gi|380848568|emb|CCA30604.1| putative transcription factor [Selaginella moellendorffii]
Length = 212
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 41 KVMTDEQLETLRKQIAVYATICEQLVEMHK-SLSAHQDL----AAAGGRLGNIYCDPLMT 95
+VMT++QL +QI ++ I ++ K S+ A + + G N P T
Sbjct: 67 RVMTEDQLAQFAEQIRQFSEISRFSIQRQKASMDAERQRRTHKSGFRGSSSNTERPPGAT 126
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
R RW PTPVQ+ ILE IF+ P + I IT L +G + E NV+ W
Sbjct: 127 ---------RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYW 177
Query: 156 FQNRRARSKR 165
FQNRRAR+KR
Sbjct: 178 FQNRRARAKR 187
>gi|207083717|gb|ACI23250.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 249
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 22 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 81
Query: 165 RKQ 167
KQ
Sbjct: 82 HKQ 84
>gi|224077030|ref|XP_002305099.1| predicted protein [Populus trichocarpa]
gi|222848063|gb|EEE85610.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I V+L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 57 KPRWNPKPDQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 165 RK 166
+
Sbjct: 117 HR 118
>gi|255563018|ref|XP_002522513.1| hypothetical protein RCOM_1012260 [Ricinus communis]
gi|223538204|gb|EEF39813.1| hypothetical protein RCOM_1012260 [Ricinus communis]
Length = 390
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 57 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 165 RK 166
K
Sbjct: 117 HK 118
>gi|229359343|emb|CAT02930.1| putative wuschel homeobox protein WOX13 [Gnetum gnemon]
Length = 50
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
QRWTP+ Q+ IL+ +++ G P+KQKIK+IT ELSQHG +SETNVYNW
Sbjct: 1 QRWTPSQSQIDILDRVYEASNGNPNKQKIKDITAELSQHGPVSETNVYNW 50
>gi|2253582|gb|AAC69146.1| putative homeodomain transcription factor [Arabidopsis thaliana]
Length = 321
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 165 RK 166
K
Sbjct: 113 HK 114
>gi|225443552|ref|XP_002273188.1| PREDICTED: WUSCHEL-related homeobox 9-like [Vitis vinifera]
Length = 379
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L + GQ+ + NV+ WFQNR++RSK
Sbjct: 55 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEFGQVGDANVFYWFQNRKSRSK 114
Query: 165 RKQ 167
KQ
Sbjct: 115 HKQ 117
>gi|297834708|ref|XP_002885236.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331076|gb|EFH61495.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ RW PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +A
Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130
Query: 162 R---SKRKQLVSSSANTLHNGGGGGAGAGAGGAD-SEVETEVDSLLLHDEHKTTKPENLS 217
R +R+Q+ + ++ + + G D S + E + T+PE S
Sbjct: 131 RERQKRRRQMEAGHEESVFSTTSLVSNHGFDKKDPSGYKVEQSKNWICSIGCDTQPEKPS 190
Query: 218 SAHSTSQPQHLR 229
H +P ++R
Sbjct: 191 HDHHLEEPANIR 202
>gi|218764874|gb|ACL11801.1| WOX9-like protein [Phaseolus coccineus]
Length = 393
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 55 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 114
Query: 165 RK 166
K
Sbjct: 115 HK 116
>gi|297789746|ref|XP_002862807.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
gi|297308541|gb|EFH39065.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 167 Q 167
+
Sbjct: 136 R 136
>gi|37909316|gb|AAP37133.1| WOX1 protein [Arabidopsis thaliana]
Length = 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ RW PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +A
Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130
Query: 162 RSKRKQ 167
R ++K+
Sbjct: 131 RERQKR 136
>gi|356541244|ref|XP_003539089.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 261
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G ++A RW PT Q+ +LE+++ QG TPS ++I++IT L +G I NV+ W
Sbjct: 20 SNGNEGVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYW 79
Query: 156 FQNRRARSKRKQ 167
FQN +AR ++KQ
Sbjct: 80 FQNHKARQRQKQ 91
>gi|224116368|ref|XP_002331965.1| predicted protein [Populus trichocarpa]
gi|222874742|gb|EEF11873.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 57 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 165 RK 166
K
Sbjct: 117 HK 118
>gi|145338658|ref|NP_188428.3| WUSCHEL-related homeobox 1 [Arabidopsis thaliana]
gi|61217290|sp|Q6X7K0.2|WOX1_ARATH RecName: Full=WUSCHEL-related homeobox 1; AltName: Full=PFS2-like
protein
gi|9294502|dbj|BAB02721.1| homeodomain transcription factor-like protein [Arabidopsis
thaliana]
gi|332642513|gb|AEE76034.1| WUSCHEL-related homeobox 1 [Arabidopsis thaliana]
Length = 350
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ RW PTP QL++LE ++ QGT TPS I++IT +L ++G+I NV+ WFQN +A
Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130
Query: 162 RSKRKQ 167
R ++K+
Sbjct: 131 RERQKR 136
>gi|449533202|ref|XP_004173565.1| PREDICTED: WUSCHEL-related homeobox 1-like, partial [Cucumis
sativus]
Length = 193
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL++LE ++ +GT TPS +I+ IT +L ++G+I NV+ WFQN +AR
Sbjct: 81 RWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQK 140
Query: 164 KRKQLVSSSANT 175
+R+Q+ SS+ T
Sbjct: 141 RRRQMESSAITT 152
>gi|449439705|ref|XP_004137626.1| PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis sativus]
Length = 334
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL++LE ++ +GT TPS +I+ IT +L ++G+I NV+ WFQN +AR
Sbjct: 81 RWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQK 140
Query: 164 KRKQLVSSSANT 175
+R+Q+ SS+ T
Sbjct: 141 RRRQMESSAITT 152
>gi|342672241|gb|AEL30893.1| STENOFOLIA 1 [Nicotiana sylvestris]
Length = 399
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QLQ LE ++ +GT TPS ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 81 RWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 140
Query: 167 Q 167
+
Sbjct: 141 R 141
>gi|342672245|gb|AEL30895.1| STENOFOLIA-like 2 protein [Medicago sativa]
Length = 383
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR
Sbjct: 96 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLREFGKIEGKNVFYWFQNHKARERQK 155
Query: 164 KRKQLVSSSA 173
+R+Q+ S++A
Sbjct: 156 RRRQMESAAA 165
>gi|357130682|ref|XP_003566976.1| PREDICTED: WUSCHEL-related homeobox 7-like [Brachypodium
distachyon]
Length = 513
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE++F+ G P + +I I ++L ++G + + NV+ WFQNR++RSK
Sbjct: 60 KPRWNPRPEQIRILEALFNSGMANPPRDEIPRIRMKLQEYGPVGDANVFYWFQNRKSRSK 119
Query: 165 RKQL 168
K L
Sbjct: 120 NKLL 123
>gi|357521637|ref|XP_003631107.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355525129|gb|AET05583.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 358
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR
Sbjct: 96 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQK 155
Query: 164 KRKQLVSSSA 173
+R+Q+ S++A
Sbjct: 156 RRRQMESAAA 165
>gi|116811090|emb|CAJ84153.1| WOX9 protein [Populus trichocarpa]
Length = 65
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I++I V+L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 3 KPRWNPKPDQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSK 62
Query: 165 RK 166
+
Sbjct: 63 HR 64
>gi|229359317|emb|CAT02917.1| putative wuschel homeobox protein WOX13 [Acorus calamus]
Length = 46
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 41/46 (89%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
TP+QLQILE +F QG+GT +K+K+KEIT EL+QHG ++E+NVYNWF
Sbjct: 1 TPMQLQILEKLFIQGSGTRTKEKMKEITNELAQHGPVTESNVYNWF 46
>gi|342672239|gb|AEL30892.1| STENOFOLIA [Medicago truncatula]
Length = 358
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR
Sbjct: 96 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQK 155
Query: 164 KRKQLVSSSA 173
+R+Q+ S++A
Sbjct: 156 RRRQMESAAA 165
>gi|414872118|tpg|DAA50675.1| TPA: hypothetical protein ZEAMMB73_062055 [Zea mays]
Length = 370
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAA 81
YVKVM DEQ+E LRKQI++YATICEQLVEMH+ L+ HQD A
Sbjct: 289 YVKVMIDEQMEVLRKQISIYATICEQLVEMHRILTEHQDTIAV 331
>gi|303278178|ref|XP_003058382.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459542|gb|EEH56837.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 581
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RW PTP QL LE +F G GTP +++ +IT EL++ G I+E NV+NWF+N++++ KR
Sbjct: 477 RWNPTPAQLARLEELFLTGMGTPKREQRTQITEELAKLGPINEANVFNWFKNKKSKMKR 535
>gi|294464183|gb|ADE77607.1| unknown [Picea sitchensis]
Length = 159
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
+RW+PT QL+ILE+I++ G TP ++I+ I EL +HG ++ NV+ WF+NR+AR +R
Sbjct: 10 RRWSPTREQLRILETIYNGGNQTPKPEQIQVIAAELRRHGTVAGINVFYWFKNRKARERR 69
Query: 166 K 166
K
Sbjct: 70 K 70
>gi|207083715|gb|ACI23249.1| mutant compound inflorescence [Solanum lycopersicum]
Length = 251
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ P + +I++I +L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 24 KPRWNPRPEQIRILEAIFNSDMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 83
Query: 165 RKQ 167
KQ
Sbjct: 84 HKQ 86
>gi|148907916|gb|ABR17078.1| unknown [Picea sitchensis]
Length = 481
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP Q++ILE + G TP+ ++I+ IT +L Q+G+I NV+ WFQN +AR ++K
Sbjct: 135 RWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFYWFQNHKARERQK 194
Query: 167 QLVSSS 172
Q +SS
Sbjct: 195 QKRNSS 200
>gi|356522848|ref|XP_003530055.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 336
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G + RW PTP QL+ LE ++ +GT TPS ++I+ IT +L + G I NV+ WFQ
Sbjct: 73 GAAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWFQ 132
Query: 158 NRRARS--KRKQLVSSSANT 175
N +AR KR++ + S A T
Sbjct: 133 NHKARERQKRRRQMESDAET 152
>gi|359491505|ref|XP_002278336.2| PREDICTED: WUSCHEL-related homeobox 1 [Vitis vinifera]
Length = 351
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 82 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 141
Query: 167 Q 167
+
Sbjct: 142 R 142
>gi|147818819|emb|CAN59842.1| hypothetical protein VITISV_030358 [Vitis vinifera]
Length = 347
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 137
Query: 167 Q 167
+
Sbjct: 138 R 138
>gi|297734317|emb|CBI15564.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 137
Query: 167 Q 167
+
Sbjct: 138 R 138
>gi|356524686|ref|XP_003530959.1| PREDICTED: WUSCHEL-related homeobox 1-like isoform 2 [Glycine max]
Length = 365
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +A
Sbjct: 78 VVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKA 137
Query: 162 RSKRKQ 167
R ++K+
Sbjct: 138 RERQKR 143
>gi|356512974|ref|XP_003525189.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 359
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS--K 164
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR K
Sbjct: 83 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQK 142
Query: 165 RKQLVSSSANTLH 177
R++ + S+A H
Sbjct: 143 RRRQMESAAEGHH 155
>gi|89330209|emb|CAJ84163.1| WOX9A protein [Zea mays]
Length = 65
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 3 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSK 62
Query: 165 RKQ 167
KQ
Sbjct: 63 NKQ 65
>gi|356524684|ref|XP_003530958.1| PREDICTED: WUSCHEL-related homeobox 1-like isoform 1 [Glycine max]
Length = 364
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR ++K
Sbjct: 83 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQK 142
Query: 167 Q 167
+
Sbjct: 143 R 143
>gi|89330211|emb|CAJ84164.1| WOX9B protein [Zea mays]
Length = 65
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I + L Q+GQ+ + NV+ WFQNR++RSK
Sbjct: 3 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 62
Query: 165 RK 166
K
Sbjct: 63 NK 64
>gi|402575786|gb|AFQ69083.1| NARROW ORGAN 1 [Lotus japonicus]
Length = 368
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR ++K
Sbjct: 87 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQK 146
Query: 167 Q 167
+
Sbjct: 147 R 147
>gi|380848548|emb|CBX45510.1| hypothetical protein, partial [Cyathea australis]
Length = 40
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 38/40 (95%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQILE +F+Q +GTP+KQ+IKEIT+ELSQHGQISETNVY
Sbjct: 1 QLQILERLFEQESGTPNKQRIKEITIELSQHGQISETNVY 40
>gi|300681498|emb|CBH32593.1| homeobox domain containing protein, expressed [Triticum aestivum]
Length = 209
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---- 162
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 163 -SKRKQLVSSSANTLHNGGGGGAGAGAGGAD 192
KR+++ S S ++ N G A A AD
Sbjct: 74 HKKRRRVASCSPDSSSNEEESGRAAAAEPAD 104
>gi|302808622|ref|XP_002986005.1| hypothetical protein SELMODRAFT_123325 [Selaginella moellendorffii]
gi|300146153|gb|EFJ12824.1| hypothetical protein SELMODRAFT_123325 [Selaginella moellendorffii]
Length = 86
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RW PTPVQ+ ILE IF+ P + I IT L +G + E NV+ WFQNRRAR+K
Sbjct: 1 RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYWFQNRRARAK 60
Query: 165 R 165
R
Sbjct: 61 R 61
>gi|302800255|ref|XP_002981885.1| hypothetical protein SELMODRAFT_115439 [Selaginella moellendorffii]
gi|300150327|gb|EFJ16978.1| hypothetical protein SELMODRAFT_115439 [Selaginella moellendorffii]
Length = 86
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RW PTPVQ+ ILE IF+ P + I IT L +G + E NV+ WFQNRRAR+K
Sbjct: 1 RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYWFQNRRARAK 60
Query: 165 R 165
R
Sbjct: 61 R 61
>gi|116811072|emb|CAJ84144.1| WOX9 protein [Oryza sativa]
Length = 65
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE+IF+ G P + +I I ++L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 3 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSK 62
Query: 165 RK 166
K
Sbjct: 63 NK 64
>gi|116811074|emb|CAJ84145.1| WOX9C protein [Oryza sativa]
Length = 65
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ RW P P Q++ILE IF+ G P + +I+ I ++L ++GQ+ + NV+ WFQNR++R+K
Sbjct: 3 KPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQNRKSRTK 62
Query: 165 RK 166
K
Sbjct: 63 NK 64
>gi|356531158|ref|XP_003534145.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 364
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G + RW P+P QL+ LE ++ +GT TPS ++I+ IT +L + G I NV+ WFQ
Sbjct: 68 GATPVVVSSRWNPSPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWFQ 127
Query: 158 NRRARSKRKQ 167
N +AR ++K+
Sbjct: 128 NHKARERQKR 137
>gi|342672243|gb|AEL30894.1| STENOFOLIA-like 1 protein [Medicago sativa]
Length = 353
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS +I++IT +L + G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTPEQLRALEELYRRGTRTPSAVQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
+
Sbjct: 152 R 152
>gi|225434990|ref|XP_002281161.1| PREDICTED: WUSCHEL-related homeobox 2 [Vitis vinifera]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GGG S+R W PT Q+ +LES++ QG TPS ++I++IT L +G I NV+ WF
Sbjct: 7 GGGAPASSR--WNPTKEQISMLESLYMQGIRTPSAEQIQQITGRLKAYGHIEGKNVFYWF 64
Query: 157 QNRRARSKRKQ 167
QN +AR ++KQ
Sbjct: 65 QNHKARQRQKQ 75
>gi|116811066|emb|CAJ84141.1| WOX2 protein [Oryza sativa]
Length = 65
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RWTPT Q+ +LE ++ QG TP+ ++I++IT L +HG I NV+ WFQN +AR
Sbjct: 2 ANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQ 61
Query: 164 KRKQ 167
++KQ
Sbjct: 62 RQKQ 65
>gi|255582625|ref|XP_002532093.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223528227|gb|EEF30283.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 401
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TP+ ++I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 84 RWNPTPEQLRALEELYRRGTRTPTTEQIEHITKQLRRYGKIEGKNVFYWFQNHKARERQK 143
Query: 167 Q 167
+
Sbjct: 144 R 144
>gi|412993060|emb|CCO16593.1| predicted protein [Bathycoccus prasinos]
Length = 1523
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 93 LMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
+ ++ G + + + RW T QL+ LE +F T TP +K+K++T ELS G I E NV
Sbjct: 1387 IFSNTGVYSVPGKVRWQRTTAQLERLEQLFANDTTTPRGEKLKQVTEELSALGPIQECNV 1446
Query: 153 YNWFQNRRARSKR 165
+NWFQN+++R K+
Sbjct: 1447 FNWFQNKKSRLKK 1459
>gi|413918426|gb|AFW58358.1| hypothetical protein ZEAMMB73_882376 [Zea mays]
Length = 1482
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 39 YVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAA 81
YVKVM D+Q+E LRKQI++YATICEQLVEMH+ L+ H+D A
Sbjct: 1142 YVKVMIDKQMEVLRKQISIYATICEQLVEMHRILTEHEDTIAV 1184
>gi|224054787|ref|XP_002298364.1| predicted protein [Populus trichocarpa]
gi|222845622|gb|EEE83169.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
++S GG S RW+PT Q+ +LES + QG TPS + I++I L +G I NV+
Sbjct: 3 VSSSGG--ASVNSRWSPTKEQISMLESFYSQGIRTPSTEMIEQIASRLKAYGHIEGKNVF 60
Query: 154 NWFQNRRARSKRKQ 167
WFQN +AR ++KQ
Sbjct: 61 YWFQNHKARQRQKQ 74
>gi|255584160|ref|XP_002532820.1| hypothetical protein RCOM_1264090 [Ricinus communis]
gi|223527440|gb|EEF29577.1| hypothetical protein RCOM_1264090 [Ricinus communis]
Length = 163
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+A RW PTP QL ILE ++ G TP+ +I+ IT LS +G+I NV+ WFQN +AR
Sbjct: 4 AASSRWCPTPEQLMILEELYRNGIRTPNASQIQRITAHLSLYGKIEGKNVFYWFQNHKAR 63
Query: 163 SKRK 166
++K
Sbjct: 64 DRQK 67
>gi|116811082|emb|CAJ84149.1| WOX1B protein [Populus trichocarpa]
Length = 65
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS +I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTPEQLRTLEDLYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 64
Query: 167 Q 167
+
Sbjct: 65 R 65
>gi|89330213|emb|CAJ84165.1| WOX9C protein [Zea mays]
Length = 65
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RW P P Q++ILE IF+ G P + +I+ I ++L ++G + + NV+ WFQNR++R+K
Sbjct: 3 RPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQNRKSRTK 62
Query: 165 RK 166
K
Sbjct: 63 HK 64
>gi|116811080|emb|CAJ84148.1| WOX1A protein [Populus trichocarpa]
Length = 65
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS +I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTPEQLRTLEELYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 64
Query: 167 Q 167
+
Sbjct: 65 R 65
>gi|83853807|gb|ABC47840.1| WOX4 protein [Glycine max]
Length = 188
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++ITV+L ++G+I NV+ WFQN +AR ++K
Sbjct: 49 RWNPTQEQIGILEMLYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 108
Query: 167 QLVSSSANT 175
Q SS A++
Sbjct: 109 QKRSSLASS 117
>gi|302190100|dbj|BAJ14109.1| PRESSED FLOWER b [Juncus prismatocarpus subsp. leschenaultii]
Length = 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL ILE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWCPTPEQLMILEEMYRNGLQTPNAPQIQQITAHLSCYGRIEGKNVFYWFQNHKARDRQK 67
Query: 167 Q---------LVSSSANTLHNG 179
L + SA HN
Sbjct: 68 MRRKLHSMSVLYAQSAAHYHNS 89
>gi|242089333|ref|XP_002440499.1| hypothetical protein SORBIDRAFT_09g002010 [Sorghum bicolor]
gi|241945784|gb|EES18929.1| hypothetical protein SORBIDRAFT_09g002010 [Sorghum bicolor]
Length = 268
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +A
Sbjct: 18 VAGSTRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKA 77
Query: 162 RSKRK 166
R ++K
Sbjct: 78 RDRQK 82
>gi|169667043|gb|ACA64094.1| WOX2 [Petunia x hybrida]
Length = 256
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
M S GG +R W PT Q+ +LES++ QG TPS ++I++IT L G I NV+
Sbjct: 8 MLSSGGTPTGSR--WNPTKEQIDLLESLYRQGIRTPSAEQIQQITGRLRAFGHIEGKNVF 65
Query: 154 NWFQNRRARSKRKQ 167
WFQN +AR ++KQ
Sbjct: 66 YWFQNHKARQRQKQ 79
>gi|302190106|dbj|BAJ14112.1| PRESSED FLOWER b [Juncus wallichianus]
Length = 190
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL ILE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWCPTPEQLMILEEMYRNGLRTPNAPQIQQITAHLSCYGRIEGKNVFYWFQNHKARDRQK 67
Query: 167 Q---------LVSSSANTLHN 178
L + SA HN
Sbjct: 68 MRRKLHSMSVLYAQSAAHYHN 88
>gi|225435146|ref|XP_002281707.1| PREDICTED: WUSCHEL-related homeobox 3 [Vitis vinifera]
gi|147789069|emb|CAN60351.1| hypothetical protein VITISV_005805 [Vitis vinifera]
Length = 208
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+A RW PTP QL ILE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR
Sbjct: 4 AASSRWCPTPEQLMILEEMYRGGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKAR 63
Query: 163 SKRK 166
++K
Sbjct: 64 DRQK 67
>gi|356544586|ref|XP_003540730.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 256
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE+++ QG TPS ++I++IT L +G I NV+ WFQN +AR ++K
Sbjct: 34 RWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQK 93
Query: 167 Q 167
Q
Sbjct: 94 Q 94
>gi|159232344|emb|CAM32345.1| putative wuschel homeobox protein [Zea mays]
gi|194695860|gb|ACF82014.1| unknown [Zea mays]
gi|195608700|gb|ACG26180.1| homeobox domain containing protein [Zea mays]
gi|414879775|tpg|DAA56906.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 324
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE +++ G TPS ++I++IT L +HG I NV+ WFQN +AR +++
Sbjct: 41 RWNPTKEQVAVLEGLYEHGLRTPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQRQR 100
Query: 167 QLVSSSA 173
Q S A
Sbjct: 101 QKQDSFA 107
>gi|449518001|ref|XP_004166032.1| PREDICTED: WUSCHEL-related homeobox 6-like [Cucumis sativus]
Length = 334
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
+ + RW PT QL+ILE ++ +GT TPS +I+ IT +L + G+I NV+ WFQN +A
Sbjct: 87 VVSSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKA 146
Query: 162 RSKRKQLVSSSAN 174
R ++K+ ++A+
Sbjct: 147 RERQKRRRQTAAD 159
>gi|224135545|ref|XP_002322100.1| predicted protein [Populus trichocarpa]
gi|222869096|gb|EEF06227.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS +I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTPEQLRTLEDLYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 60
Query: 167 Q 167
+
Sbjct: 61 R 61
>gi|224118664|ref|XP_002317877.1| predicted protein [Populus trichocarpa]
gi|222858550|gb|EEE96097.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL+ LE ++ +GT TPS +I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTPEQLRTLEELYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 60
Query: 167 Q 167
+
Sbjct: 61 R 61
>gi|255581093|ref|XP_002531361.1| transcription factor, putative [Ricinus communis]
gi|223529021|gb|EEF31009.1| transcription factor, putative [Ricinus communis]
Length = 268
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G H++++R W PT Q+ +LE+++ QG TP+ ++I++IT L +G I NV+ WFQ
Sbjct: 16 GAHQVNSR--WNPTKEQIGLLENMYRQGIRTPTAEQIQQITTRLRDYGHIEGKNVFYWFQ 73
Query: 158 NRRARSKRKQ 167
N +AR ++KQ
Sbjct: 74 NHKARQRQKQ 83
>gi|351724163|ref|NP_001237560.1| uncharacterized protein LOC100499894 [Glycine max]
gi|255627481|gb|ACU14085.1| unknown [Glycine max]
Length = 224
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++ITV+L ++G+I NV+ WFQN +AR ++K
Sbjct: 85 RWNPTQEQIGILEMLYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 144
Query: 167 QLVSSSANT 175
Q SS A++
Sbjct: 145 QNRSSLASS 153
>gi|163838708|ref|NP_001106239.1| putative wuschel homeobox protein [Zea mays]
gi|159232346|emb|CAM32346.1| putative wuschel homeobox protein [Zea mays]
gi|194702210|gb|ACF85189.1| unknown [Zea mays]
gi|413942154|gb|AFW74803.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 258
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 19 RWCPTPEQLMILEDMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKARDRQK 78
>gi|297822575|ref|XP_002879170.1| hypothetical protein ARALYDRAFT_481772 [Arabidopsis lyrata subsp.
lyrata]
gi|297325009|gb|EFH55429.1| hypothetical protein ARALYDRAFT_481772 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 164 KRK 166
++K
Sbjct: 65 RQK 67
>gi|297746166|emb|CBI16222.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+A RW PTP QL ILE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR
Sbjct: 4 AASSRWCPTPEQLMILEEMYRGGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKAR 63
Query: 163 SKRK 166
++K
Sbjct: 64 DRQK 67
>gi|116831125|gb|ABK28517.1| unknown [Arabidopsis thaliana]
Length = 245
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 164 KRK 166
++K
Sbjct: 65 RQK 67
>gi|15226914|ref|NP_180429.1| WUSCHEL-related homeobox 3 [Arabidopsis thaliana]
gi|61217434|sp|Q9SIB4.1|WOX3_ARATH RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=Protein
PRESSED FLOWER
gi|4580396|gb|AAD24374.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|17907768|dbj|BAB79446.1| PRESSED FLOWER [Arabidopsis thaliana]
gi|37954308|gb|AAP37135.1| PRS/WOX3 protein [Arabidopsis thaliana]
gi|91806283|gb|ABE65869.1| homeobox-leucine zipper transcription factor [Arabidopsis thaliana]
gi|330253055|gb|AEC08149.1| WUSCHEL-related homeobox 3 [Arabidopsis thaliana]
Length = 244
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 164 KRK 166
++K
Sbjct: 65 RQK 67
>gi|75287598|sp|Q5W7C3.1|WOX2_ORYSJ RecName: Full=Putative WUSCHEL-related homeobox 2; AltName:
Full=OsWOX2
gi|55168346|gb|AAV44211.1| hypothetical protein [Oryza sativa Japonica Group]
gi|159232362|emb|CAM32354.1| putative wuschel homeobox protein [Oryza sativa]
Length = 286
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL +LE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>gi|147801558|emb|CAN77014.1| hypothetical protein VITISV_036884 [Vitis vinifera]
Length = 411
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QLQ LE ++ +GT TP+ ++I++I +L G+I NV+ WFQN +AR ++K
Sbjct: 160 RWNPTPEQLQALEELYRRGTRTPTAEQIQQIAAQLRLFGKIEGKNVFYWFQNHKARERQK 219
Query: 167 Q 167
+
Sbjct: 220 R 220
>gi|115441115|ref|NP_001044837.1| Os01g0854500 [Oryza sativa Japonica Group]
gi|61217396|sp|Q8W0F1.1|WOX9_ORYSJ RecName: Full=WUSCHEL-related homeobox 9; AltName: Full=OsWOX9;
AltName: Full=Protein WOX5; AltName:
Full=Quiescent-specific homeobox protein
gi|18461215|dbj|BAB84412.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
gi|56784417|dbj|BAD82456.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
gi|113534368|dbj|BAF06751.1| Os01g0854500 [Oryza sativa Japonica Group]
gi|125528419|gb|EAY76533.1| hypothetical protein OsI_04476 [Oryza sativa Indica Group]
gi|215717078|dbj|BAG95441.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS--- 163
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 164 -KRKQLVSSSANTLHNGGGGGAGAGAGGAD 192
K+++ +SS ++ N G A A G AD
Sbjct: 74 HKKRRRGASSPDSGSNDDDGRAAAHEGDAD 103
>gi|159232348|emb|CAM32347.1| putative wuschel homeobox protein [Zea mays]
Length = 245
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+P Q+++LE ++ G TP+ +I++IT EL ++G+I NV+ WFQNR+AR ++K
Sbjct: 96 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNRKARERQK 155
Query: 167 Q 167
Q
Sbjct: 156 Q 156
>gi|160221295|sp|A2XZR3.1|WOX2_ORYSI RecName: Full=Putative WUSCHEL-related homeobox 2; AltName:
Full=OsWOX2
gi|125550614|gb|EAY96323.1| hypothetical protein OsI_18225 [Oryza sativa Indica Group]
Length = 286
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL +LE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>gi|229359437|emb|CAT02903.2| putative wuschel homeobox protein WOX3A [Ginkgo biloba]
Length = 215
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RWTPTP QL +LE ++ G P+ ++I++ T LS +G+I N++ WFQNR+AR
Sbjct: 36 ASTRWTPTPEQLMLLEDMYTNGIRNPTGEQIQQFTAHLSLYGKIEGRNLFYWFQNRKARD 95
Query: 164 KRK 166
+ K
Sbjct: 96 RLK 98
>gi|359472618|ref|XP_002280774.2| PREDICTED: WUSCHEL-related homeobox 1-like [Vitis vinifera]
gi|297737692|emb|CBI26893.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QLQ LE ++ +GT TP+ ++I++I +L G+I NV+ WFQN +AR ++K
Sbjct: 86 RWNPTPEQLQALEELYRRGTRTPTAEQIQQIAAQLRLFGKIEGKNVFYWFQNHKARERQK 145
Query: 167 Q 167
+
Sbjct: 146 R 146
>gi|89330203|emb|CAJ84160.1| WOX4 protein [Zea mays]
Length = 65
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+P Q+++LE ++ G TP+ +I++IT EL ++G+I NV+ WFQNR+AR ++K
Sbjct: 5 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNRKARERQK 64
Query: 167 Q 167
Q
Sbjct: 65 Q 65
>gi|380848556|emb|CBX45514.1| hypothetical protein, partial [Equisetum giganteum]
Length = 40
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQ+LE F+Q G PSKQ+IKEIT ELSQHGQISETNVY
Sbjct: 1 QLQLLEKFFEQENGAPSKQRIKEITAELSQHGQISETNVY 40
>gi|242077408|ref|XP_002448640.1| hypothetical protein SORBIDRAFT_06g030700 [Sorghum bicolor]
gi|241939823|gb|EES12968.1| hypothetical protein SORBIDRAFT_06g030700 [Sorghum bicolor]
Length = 245
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE 140
A RL N C + + GG RW P+P Q+++LE ++ G TP+ +I++IT E
Sbjct: 75 ASSRLLN--CTVQVPTAGGT-----TRWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEE 127
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQ 167
L ++G+I NV+ WFQN +AR ++KQ
Sbjct: 128 LGKYGRIEGKNVFYWFQNHKARERQKQ 154
>gi|357437765|ref|XP_003589158.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355478206|gb|AES59409.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 236
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++ITV+LS++G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQK 149
Query: 167 Q 167
Q
Sbjct: 150 Q 150
>gi|256274567|gb|ACU68503.1| WOX3 protein [Petunia x hybrida]
Length = 222
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
M+ KI+ RW+PTP QL +LE ++ +G P+ +I+ IT LS +G+I NV+
Sbjct: 1 MSLLKREKITRPTRWSPTPEQLMLLEEMYRKGLRNPNATQIQNITAHLSCYGKIEGKNVF 60
Query: 154 NWFQNRRARSKRK 166
WFQN +AR ++K
Sbjct: 61 YWFQNHKARDRQK 73
>gi|359807626|ref|NP_001241420.1| uncharacterized protein LOC100781015 [Glycine max]
gi|255640907|gb|ACU20736.1| unknown [Glycine max]
Length = 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++ITV+L ++G+I NV+ WFQN +AR ++K
Sbjct: 91 RWNPTQEQIGILEMLYKGGIRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 150
Query: 167 QLVSSSA 173
Q +S A
Sbjct: 151 QKRNSLA 157
>gi|388519193|gb|AFK47658.1| unknown [Medicago truncatula]
Length = 236
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++ITV+LS++G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQK 149
Query: 167 Q 167
Q
Sbjct: 150 Q 150
>gi|255571841|ref|XP_002526863.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223533762|gb|EEF35494.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 192
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 41 RWNPTSEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQK 100
Query: 167 QLVSSSANTLHNGGGGGAGAGAGGADSEV 195
+ S+ H G + +G SE+
Sbjct: 101 RRRVSTDEKEHIIRGDDNLSSSGRYFSEI 129
>gi|357162384|ref|XP_003579392.1| PREDICTED: WUSCHEL-related homeobox 4-like [Brachypodium
distachyon]
Length = 236
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+ Q+++LE+++ G TP+ +I+ IT EL +HG+I NV+ WFQN +AR ++K
Sbjct: 83 RWNPSTEQIKVLEALYRGGMRTPNAAQIERITEELGRHGRIEGKNVFYWFQNHKARERQK 142
Query: 167 QLVSSSANTLHNGGGG 182
Q ++ TL G G
Sbjct: 143 Q-KRAALLTLATAGTG 157
>gi|229359435|emb|CAT02902.2| putative wuschel homeobox protein WOX2 [Ginkgo biloba]
Length = 349
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE ++ QG TP+ Q+I++IT L G I NV+ WFQN +AR ++K
Sbjct: 49 RWNPTKEQIAVLEGLYRQGIRTPTAQQIQQITSRLRMFGNIEGKNVFYWFQNHKARQRQK 108
Query: 167 Q 167
Q
Sbjct: 109 Q 109
>gi|229359345|emb|CAT02931.1| putative wuschel homeobox protein WOX3 [Gnetum gnemon]
Length = 178
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PT QL ILE ++ G TPS ++I++IT LS +G+I NV+ WFQN +AR
Sbjct: 34 ATTRWNPTAEQLMILEELYRGGMRTPSAEQIQQITAHLSLYGKIEGKNVFYWFQNHKARD 93
Query: 164 KRK 166
++K
Sbjct: 94 RQK 96
>gi|255570140|ref|XP_002526032.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223534679|gb|EEF36372.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 316
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---S 163
RW PTP QL LE ++ +GT TP+ ++I++I +L + G+I NV+ WFQN +AR
Sbjct: 76 RWNPTPEQLLALEEMYRRGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQK 135
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAH 220
+R+++ S+ + H+ G G + E E + LL P N S H
Sbjct: 136 RRREMESNCKSRKHDHTGSLDKNKTGLRRTGHELEQNRNLL------VPPSNCSDQH 186
>gi|297796885|ref|XP_002866327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312162|gb|EFH42586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
M + G ++ RW PT Q+ +LE+++ QG TPS +I++IT L +G I NV+
Sbjct: 1 MENEGNVGTASSSRWNPTKDQITLLENLYKQGIRTPSADQIQQITGRLRAYGHIEGKNVF 60
Query: 154 NWFQNRRARSKRKQ 167
WFQN +AR ++KQ
Sbjct: 61 YWFQNHKARQRQKQ 74
>gi|255630905|gb|ACU15815.1| unknown [Glycine max]
Length = 231
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|356547240|ref|XP_003542024.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 212
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
S+ RW+PT Q+ +LE+++ QG TPS ++I++IT L +G I NV+ WFQN +AR
Sbjct: 17 SSVSRWSPTKEQIDMLENLYKQGIRTPSTEQIQQITSRLRAYGHIEGKNVFYWFQNHKAR 76
Query: 163 SKRKQL 168
++K +
Sbjct: 77 QRQKLM 82
>gi|255538238|ref|XP_002510184.1| transcription factor, putative [Ricinus communis]
gi|223550885|gb|EEF52371.1| transcription factor, putative [Ricinus communis]
Length = 228
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSRYGKIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|162460479|ref|NP_001105961.1| WUS2 protein [Zea mays]
gi|116811058|emb|CAJ84137.1| WUS2 protein [Zea mays]
gi|413919842|gb|AFW59774.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPTP Q+++L+ ++ G +PS ++I+ IT L QHG+I NV+ WFQN +AR ++
Sbjct: 31 RWTPTPEQIRMLKELYYGCGIRSPSSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 90
Query: 166 KQLVSS 171
K+ ++S
Sbjct: 91 KRRLTS 96
>gi|224063491|ref|XP_002301170.1| predicted protein [Populus trichocarpa]
gi|222842896|gb|EEE80443.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 167 Q 167
Q
Sbjct: 139 Q 139
>gi|357505539|ref|XP_003623058.1| WUSCHEL-related homeobox 3B [Medicago truncatula]
gi|355498073|gb|AES79276.1| WUSCHEL-related homeobox 3B [Medicago truncatula]
Length = 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW+PT QL ILE ++ G TPS +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWSPTTEQLMILEELYRSGIRTPSAVQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQK 67
>gi|118483898|gb|ABK93839.1| unknown [Populus trichocarpa]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 167 Q 167
Q
Sbjct: 139 Q 139
>gi|356552220|ref|XP_003544467.1| PREDICTED: WUSCHEL-related homeobox 4 [Glycine max]
Length = 231
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|224555007|gb|ACN56439.1| WUSCHEL-related homeobox-containing protein 4 [Ocotea
catharinensis]
Length = 213
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 167 Q 167
Q
Sbjct: 139 Q 139
>gi|297817740|ref|XP_002876753.1| HOS9/PFS2 [Arabidopsis lyrata subsp. lyrata]
gi|297322591|gb|EFH53012.1| HOS9/PFS2 [Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+A RW PTP Q+ +LE ++ GT TP+ + I++I +L ++G+I NV+ WFQN +AR
Sbjct: 57 TATSRWNPTPEQITMLEELYMSGTRTPTTEHIQQIASKLRKYGRIEGKNVFYWFQNHKAR 116
Query: 163 S--KRKQLVSSSANTLHNGGGGGAGAG 187
KR++ + N H + G
Sbjct: 117 ERLKRRRCEGGALNKPHKDVKDSSSGG 143
>gi|413950144|gb|AFW82793.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL +LE + G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 16 RWCPTPEQLMVLEETYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKARDRQK 75
>gi|224137604|ref|XP_002327167.1| predicted protein [Populus trichocarpa]
gi|222835482|gb|EEE73917.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 167 Q 167
Q
Sbjct: 139 Q 139
>gi|356562265|ref|XP_003549392.1| PREDICTED: WUSCHEL-related homeobox 4-like [Glycine max]
Length = 242
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 98 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 157
Query: 167 Q 167
Q
Sbjct: 158 Q 158
>gi|12321880|gb|AAG50976.1|AC073395_18 hypothetical protein; 64772-65429 [Arabidopsis thaliana]
Length = 165
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL+IL +F G TP+ +I++I+ ELS +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 167 QLV 169
+ V
Sbjct: 84 RHV 86
>gi|162460274|ref|NP_001105960.1| WUS1 protein [Zea mays]
gi|116811056|emb|CAJ84136.1| WUS1 protein [Zea mays]
Length = 312
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPTP Q++IL+ ++ G +P+ ++I+ IT L QHG+I NV+ WFQN +AR ++
Sbjct: 40 RWTPTPEQIRILKELYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 99
Query: 166 KQ 167
K+
Sbjct: 100 KR 101
>gi|414584944|tpg|DAA35515.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 320
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPTP Q++IL+ ++ G +P+ ++I+ IT L QHG+I NV+ WFQN +AR ++
Sbjct: 40 RWTPTPEQIRILKELYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 99
Query: 166 KQ 167
K+
Sbjct: 100 KR 101
>gi|388492044|gb|AFK34088.1| unknown [Lotus japonicus]
Length = 227
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 94 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 153
Query: 167 Q 167
Q
Sbjct: 154 Q 154
>gi|225458680|ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis vinifera]
gi|147773642|emb|CAN76463.1| hypothetical protein VITISV_017034 [Vitis vinifera]
gi|302142285|emb|CBI19488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTQEQIGILEMLYKSGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQK 137
Query: 167 Q 167
Q
Sbjct: 138 Q 138
>gi|357483743|ref|XP_003612158.1| WUSCHEL [Medicago truncatula]
gi|218456562|gb|ACK77479.1| WUSCHEL [Medicago truncatula]
gi|355513493|gb|AES95116.1| WUSCHEL [Medicago truncatula]
Length = 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 30 RWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 89
Query: 166 KQLVSSSANTL 176
K+ +S N +
Sbjct: 90 KKRFTSDVNVV 100
>gi|195629504|gb|ACG36393.1| WUSCHEL-related homeobox 4 [Zea mays]
gi|238009026|gb|ACR35548.1| unknown [Zea mays]
Length = 250
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+P Q+++LE ++ G TP+ +I++IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 102 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQK 161
Query: 167 Q 167
Q
Sbjct: 162 Q 162
>gi|302190104|dbj|BAJ14111.1| PRESSED FLOWER a [Juncus wallichianus]
Length = 199
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP Q+ ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWCPTPEQVMILEEMYRSGMRTPNAAQIQQITAHLAFYGKIEGKNVFYWFQNHKARERQK 67
>gi|116811086|emb|CAJ84151.1| WOX4 protein [Populus trichocarpa]
Length = 65
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +LS++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 64
Query: 167 Q 167
Q
Sbjct: 65 Q 65
>gi|302190098|dbj|BAJ14108.1| PRESSED FLOWER a [Juncus prismatocarpus subsp. leschenaultii]
Length = 199
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP Q+ ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWCPTPEQVMILEEMYRSGMRTPNAAQIQQITAHLAFYGKIEGKNVFYWFQNHKARERQK 67
>gi|89330201|emb|CAJ84159.1| WOX2A protein [Zea mays]
Length = 65
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PT Q+ +LE +++ G TPS ++I++IT L +HG I NV+ WFQN +AR
Sbjct: 2 ANARWNPTKEQVAVLEGLYEHGLRTPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQ 61
Query: 164 KRKQ 167
+++Q
Sbjct: 62 RQRQ 65
>gi|242077542|ref|XP_002448707.1| hypothetical protein SORBIDRAFT_06g031880 [Sorghum bicolor]
gi|241939890|gb|EES13035.1| hypothetical protein SORBIDRAFT_06g031880 [Sorghum bicolor]
Length = 327
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPTP Q++IL E + G +P+ ++I+ IT L QHG+I NV+ WFQN +AR ++
Sbjct: 44 RWTPTPEQIRILKEFYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 103
Query: 166 KQ 167
K+
Sbjct: 104 KR 105
>gi|30681653|ref|NP_187735.2| WUSCHEL-related homeobox 5 [Arabidopsis thaliana]
gi|61217376|sp|Q8H1D2.1|WOX5_ARATH RecName: Full=WUSCHEL-related homeobox 5
gi|24953995|gb|AAN64659.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|37955172|gb|AAP37136.1| WOX5 protein [Arabidopsis thaliana]
gi|225898633|dbj|BAH30447.1| hypothetical protein [Arabidopsis thaliana]
gi|332641500|gb|AEE75021.1| WUSCHEL-related homeobox 5 [Arabidopsis thaliana]
Length = 182
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL+IL +F G TP+ +I++I+ ELS +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 167 Q 167
+
Sbjct: 84 R 84
>gi|297829678|ref|XP_002882721.1| hypothetical protein ARALYDRAFT_478466 [Arabidopsis lyrata subsp.
lyrata]
gi|297328561|gb|EFH58980.1| hypothetical protein ARALYDRAFT_478466 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL+IL +F G TP+ +I++I+ ELS +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 86
Query: 167 Q 167
+
Sbjct: 87 R 87
>gi|357131265|ref|XP_003567259.1| PREDICTED: WUSCHEL-related homeobox 5-like [Brachypodium
distachyon]
Length = 311
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 86 GNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
G + P M+ + A RWTPT Q ++LE ++ QG TPS ++I+ I L QHG
Sbjct: 31 GRVPVSPPMSPNSEAALLANARWTPTQEQRELLEGLYRQGLHTPSAEQIQGIAARLRQHG 90
Query: 146 QISETNVYNWFQNRRA 161
+ NV+ WFQN +A
Sbjct: 91 PVEGKNVFYWFQNYKA 106
>gi|169667045|gb|ACA64095.1| WOX4 [Petunia x hybrida]
Length = 237
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT++L ++G+I NV+ WFQN +AR ++K
Sbjct: 99 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITLQLGKYGKIEGKNVFYWFQNHKARERQK 158
Query: 167 Q 167
Q
Sbjct: 159 Q 159
>gi|242059187|ref|XP_002458739.1| hypothetical protein SORBIDRAFT_03g039380 [Sorghum bicolor]
gi|241930714|gb|EES03859.1| hypothetical protein SORBIDRAFT_03g039380 [Sorghum bicolor]
Length = 340
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE +++ G PS ++I++IT L +HG I NV+ WFQN +AR + +
Sbjct: 47 RWNPTKEQVAVLEGLYEHGLRNPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQRHR 106
Query: 167 QLVSSSA 173
Q S A
Sbjct: 107 QKQDSFA 113
>gi|449461025|ref|XP_004148244.1| PREDICTED: WUSCHEL-related homeobox 3-like [Cucumis sativus]
gi|449522913|ref|XP_004168470.1| PREDICTED: WUSCHEL-related homeobox 3-like [Cucumis sativus]
Length = 193
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP Q+ ILE I+ G TP+ +I+ IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
>gi|229359355|emb|CAT02936.1| putative wuschel homeobox protein WOX3 [Pinus sylvestris]
Length = 147
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
A RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR
Sbjct: 5 ATTRWNPTPEQLVILEEMYRGGIRTPNADQIQQITAHLALYGKIEGKNVFYWFQNHKARD 64
Query: 164 KRK 166
++K
Sbjct: 65 RQK 67
>gi|116811064|emb|CAJ84140.1| NS protein [Oryza sativa]
Length = 65
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR +++
Sbjct: 5 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 64
>gi|449450241|ref|XP_004142872.1| PREDICTED: WUSCHEL-related homeobox 4-like [Cucumis sativus]
Length = 227
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ +G TP+ Q+I+ IT +L +G+I NV+ WFQN +AR ++K
Sbjct: 96 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 155
Query: 167 Q 167
Q
Sbjct: 156 Q 156
>gi|307135854|gb|ADN33723.1| homeodomain transcription factor [Cucumis melo subsp. melo]
Length = 225
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ +G TP+ Q+I+ IT +L +G+I NV+ WFQN +AR ++K
Sbjct: 94 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQK 153
Query: 167 Q 167
Q
Sbjct: 154 Q 154
>gi|194692878|gb|ACF80523.1| unknown [Zea mays]
Length = 180
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+P Q+++LE ++ G TP+ +I++IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 32 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQK 91
Query: 167 Q 167
Q
Sbjct: 92 Q 92
>gi|297806591|ref|XP_002871179.1| hypothetical protein ARALYDRAFT_349845 [Arabidopsis lyrata subsp.
lyrata]
gi|297317016|gb|EFH47438.1| hypothetical protein ARALYDRAFT_349845 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ ELS +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 88
Query: 167 QLVSSSANTLH 177
+ S+ + H
Sbjct: 89 RRRISTVDFDH 99
>gi|8099120|dbj|BAA90492.1| unnamed protein product [Oryza sativa]
Length = 275
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RW PTP QL +LE ++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85
>gi|37909278|gb|AAP37131.1| WOX2 protein [Arabidopsis thaliana]
Length = 260
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE+++ +G TPS +I++IT L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 167 Q 167
Q
Sbjct: 74 Q 74
>gi|116811084|emb|CAJ84150.1| WOX2 protein [Populus trichocarpa]
Length = 65
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
S RW+PT Q+ +LES + QG TPS + I++I L +G I NV+ WFQN +AR
Sbjct: 1 SVNSRWSPTKEQISMLESFYSQGIRTPSTEMIEQIASRLKAYGHIEGKNVFYWFQNHKAR 60
Query: 163 SKRKQ 167
++KQ
Sbjct: 61 QRQKQ 65
>gi|79540980|ref|NP_200742.2| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
gi|61217291|sp|Q6X7K1.1|WOX2_ARATH RecName: Full=WUSCHEL-related homeobox 2
gi|37909289|gb|AAP37132.1| WOX2 protein [Arabidopsis thaliana]
gi|225879134|dbj|BAH30637.1| hypothetical protein [Arabidopsis thaliana]
gi|332009790|gb|AED97173.1| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
Length = 260
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LE+++ +G TPS +I++IT L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 167 Q 167
Q
Sbjct: 74 Q 74
>gi|61217028|sp|Q8LL11.1|WUS_PETHY RecName: Full=Protein WUSCHEL; AltName: Full=PhWUS; AltName:
Full=Protein TERMINATOR
gi|22087128|gb|AAM90847.1|AF481951_1 wuschel protein [Petunia x hybrida]
Length = 307
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ ++I+ I+ +L Q+G+I NV+ WFQN +AR ++
Sbjct: 47 RWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 106
Query: 166 KQLVSSSANT 175
K+ + ++A T
Sbjct: 107 KKRLIAAATT 116
>gi|30693997|ref|NP_175145.2| WUSCHEL-related homeobox 4 [Arabidopsis thaliana]
gi|61217286|sp|Q6X7J9.1|WOX4_ARATH RecName: Full=WUSCHEL-related homeobox 4
gi|37933928|gb|AAP37134.1| WOX4 protein [Arabidopsis thaliana]
gi|38454110|gb|AAR20749.1| At1g46480 [Arabidopsis thaliana]
gi|38604018|gb|AAR24752.1| At1g46480 [Arabidopsis thaliana]
gi|214011871|gb|ACJ61690.1| WOX4 [Arabidopsis thaliana]
gi|225898014|dbj|BAH30339.1| hypothetical protein [Arabidopsis thaliana]
gi|332194006|gb|AEE32127.1| WUSCHEL-related homeobox 4 [Arabidopsis thaliana]
Length = 251
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I+ IT++L ++G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 167 Q 167
Q
Sbjct: 150 Q 150
>gi|350536525|ref|NP_001234251.1| WOX4 [Solanum lycopersicum]
gi|214011869|gb|ACJ61689.1| WOX4 [Solanum lycopersicum]
gi|214011873|gb|ACJ61691.1| WOX4 [Solanum lycopersicum]
Length = 242
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I++IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 98 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQK 157
Query: 167 Q 167
Q
Sbjct: 158 Q 158
>gi|12321002|gb|AAG50620.1|AC083835_5 hypothetical protein [Arabidopsis thaliana]
Length = 249
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I+ IT++L ++G+I NV+ WFQN +AR ++K
Sbjct: 88 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 147
Query: 167 Q 167
Q
Sbjct: 148 Q 148
>gi|357129989|ref|XP_003566641.1| PREDICTED: uncharacterized protein LOC100842843 [Brachypodium
distachyon]
Length = 275
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL +LE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 20 RWCPTAEQLMVLEEMYRGGLRTPNASQIQQITAHLAHYGRIEGKNVFYWFQNHKARDRQK 79
>gi|115440959|ref|NP_001044759.1| Os01g0840300 [Oryza sativa Japonica Group]
gi|75301684|sp|Q8LR86.1|WOX5_ORYSJ RecName: Full=WUSCHEL-related homeobox 5; AltName: Full=OsWOX5;
AltName: Full=Protein WOX2
gi|160221297|sp|A2WWU7.1|WOX5_ORYSI RecName: Full=WUSCHEL-related homeobox 5; AltName: Full=OsWOX5;
AltName: Full=Protein WOX2
gi|21104626|dbj|BAB93218.1| putative WOX2 protein [Oryza sativa Japonica Group]
gi|113534290|dbj|BAF06673.1| Os01g0840300 [Oryza sativa Japonica Group]
gi|125528329|gb|EAY76443.1| hypothetical protein OsI_04377 [Oryza sativa Indica Group]
Length = 313
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
RWTPT Q+ +LE ++ QG TP+ ++I++IT L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>gi|110321612|emb|CAL18267.1| homeodomain transcription factor [Picea abies]
Length = 201
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++LE+++ QG TPS +I++I L +G I NV+ WFQN +AR +++
Sbjct: 11 RWNPTKEQIELLEAMYSQGIRTPSADQIEQIASRLGMYGNIEGKNVFYWFQNHKARERQR 70
Query: 167 Q 167
Q
Sbjct: 71 Q 71
>gi|229359361|emb|CAT03216.1| putative wuschel-related homeobox 5 protein [Nymphaea jamesoniana]
Length = 198
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS ++I+ I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKVLTDLFKAGLRTPSAEQIQRISSQLSCYGKIESKNVFYWFQNHKARERQK 88
Query: 167 Q 167
+
Sbjct: 89 R 89
>gi|229359359|emb|CAT03215.1| putative wuschel homeobox protein [Nymphaea jamesoniana]
Length = 276
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RW PT Q++IL E ++ G +PS ++I++I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 34 RWIPTAEQIRILRELYYNNGVRSPSAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQ 93
Query: 166 KQLVSSSA 173
K+ +S+ A
Sbjct: 94 KKRLSADA 101
>gi|15239229|ref|NP_196196.1| WUSCHEL-related homeobox 7 [Arabidopsis thaliana]
gi|61217420|sp|Q9FFK0.1|WOX7_ARATH RecName: Full=WUSCHEL-related homeobox 7
gi|9759102|dbj|BAB09671.1| unnamed protein product [Arabidopsis thaliana]
gi|225898893|dbj|BAH30577.1| hypothetical protein [Arabidopsis thaliana]
gi|332003539|gb|AED90922.1| WUSCHEL-related homeobox 7 [Arabidopsis thaliana]
Length = 122
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I++ELS +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>gi|356496653|ref|XP_003517180.1| PREDICTED: protein WUSCHEL-like [Glycine max]
Length = 295
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
GG + RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ W
Sbjct: 27 GGFLSRQSSTRWTPTNDQIRILKELYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYW 86
Query: 156 FQNRRARSKRKQLVSSSAN 174
FQN +AR ++K+ +S N
Sbjct: 87 FQNHKARERQKKRFTSDHN 105
>gi|125572587|gb|EAZ14102.1| hypothetical protein OsJ_04026 [Oryza sativa Japonica Group]
Length = 309
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
RWTPT Q+ +LE ++ QG TP+ ++I++IT L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>gi|61216997|sp|Q6YBV1.1|WUS_ANTMA RecName: Full=Protein WUSCHEL; AltName: Full=Protein ROSULATA
gi|37604222|gb|AAO23113.1| ROSULATA [Antirrhinum majus]
Length = 281
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 98 GGHKISARQ---RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVY 153
GG RQ RWTPT Q++IL+ ++ + G +P+ ++I+ I+ +L Q+G+I NV+
Sbjct: 28 GGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVF 87
Query: 154 NWFQNRRARSKRKQLVSS 171
WFQN +AR ++K+ ++
Sbjct: 88 YWFQNHKARERQKKRFTA 105
>gi|18379236|ref|NP_565263.1| WUSCHEL-related homeobox 6 [Arabidopsis thaliana]
gi|61217449|sp|Q9ZVF5.2|WOX6_ARATH RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=Protein
PRETTY FEW SEEDS 2
gi|20197404|gb|AAC67326.2| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|21553966|gb|AAM63047.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|40889020|gb|AAP37137.2| WOX6 protein [Arabidopsis thaliana]
gi|58429113|gb|AAW78002.1| pretty few seeds 2 [Arabidopsis thaliana]
gi|91806125|gb|ABE65791.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
gi|330250367|gb|AEC05461.1| WUSCHEL-related homeobox 6 [Arabidopsis thaliana]
Length = 271
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 86 GNIYCDPLMTSGGGHKISARQ---------RWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
GN + + S G H I R+ RW PTP Q+ LE ++ GT TP+ ++I++
Sbjct: 31 GNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQ 90
Query: 137 ITVELSQHGQISETNVYNWFQNRRA 161
I +L ++G+I NV+ WFQN +A
Sbjct: 91 IASKLRKYGRIEGKNVFYWFQNHKA 115
>gi|116831042|gb|ABK28476.1| unknown [Arabidopsis thaliana]
Length = 272
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 86 GNIYCDPLMTSGGGHKISARQ---------RWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
GN + + S G H I R+ RW PTP Q+ LE ++ GT TP+ ++I++
Sbjct: 31 GNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQ 90
Query: 137 ITVELSQHGQISETNVYNWFQNRRA 161
I +L ++G+I NV+ WFQN +A
Sbjct: 91 IASKLRKYGRIEGKNVFYWFQNHKA 115
>gi|224104459|ref|XP_002313442.1| predicted protein [Populus trichocarpa]
gi|222849850|gb|EEE87397.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +LES + QG TPS + I++IT L +G I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTKEQISMLESFYSQGIRTPSTEMIEQITSRLKAYGHIEGKNVFYWFQNHKARQRQK 60
>gi|162459869|ref|NP_001105242.1| WUSCHEL-related homeobox 3B [Zea mays]
gi|61217577|sp|Q6S3I3.1|WOX3B_MAIZE RecName: Full=WUSCHEL-related homeobox 3B; AltName: Full=Narrow
sheath protein 2
gi|39841615|gb|AAR31211.1| narrow sheath 2 [Zea mays]
gi|39841617|gb|AAR31212.1| narrow sheath 2 [Zea mays]
Length = 265
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|297836512|ref|XP_002886138.1| hypothetical protein ARALYDRAFT_900150 [Arabidopsis lyrata subsp.
lyrata]
gi|297331978|gb|EFH62397.1| hypothetical protein ARALYDRAFT_900150 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I++IT L Q+G+I NV+ WFQN +AR ++
Sbjct: 38 RWTPTTEQIRILKELYYNSGVRSPTADQIQKITARLRQYGKIEGKNVFYWFQNHKARERQ 97
Query: 166 KQLVSSSANT 175
K+ + + T
Sbjct: 98 KKRFNGTTMT 107
>gi|350536913|ref|NP_001234015.1| protein WUSCHEL [Solanum lycopersicum]
gi|61217026|sp|Q84VT7.1|WUS_SOLLC RecName: Full=Protein WUSCHEL; AltName: Full=LeWUS
gi|28070968|emb|CAD61961.1| wuschel protein [Solanum lycopersicum]
Length = 272
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK- 164
RWTPT Q++IL+ ++ + G +P+ ++I+ I+ +L Q+G+I NV+ WFQN +AR +
Sbjct: 26 RWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 165 RKQLVSSSANTLHN 178
+K+L+++++ T +N
Sbjct: 86 KKRLIAAASATDNN 99
>gi|356499151|ref|XP_003518406.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 177
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQK 86
>gi|449464944|ref|XP_004150189.1| PREDICTED: WUSCHEL-related homeobox 2-like [Cucumis sativus]
Length = 238
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
RW PT Q+ ILE+++ QG TPS +I++ITV L +G I NV+ WFQN +A
Sbjct: 24 RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKA 78
>gi|229359347|emb|CAT02932.1| putative wuschel homeobox protein WUS [Gnetum gnemon]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RW PTP QL IL+ ++ +G +PS ++I I+ +LS +G+I NV+ WFQN +AR ++
Sbjct: 16 RWNPTPEQLSILKELYHGRGIRSPSAEQIHHISWKLSSYGKIEGKNVFYWFQNHKARQRQ 75
Query: 166 KQLVSS 171
K+ + S
Sbjct: 76 KERLGS 81
>gi|356537978|ref|XP_003537483.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 179
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 30 RWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 89
Query: 167 Q 167
+
Sbjct: 90 R 90
>gi|356569315|ref|XP_003552848.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 174
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 25 RWNPTTEQVKVLTDLFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 84
Query: 167 Q 167
+
Sbjct: 85 R 85
>gi|297852296|ref|XP_002894029.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297339871|gb|EFH70288.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ G TP+ Q+I+ IT +L ++G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITSQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 167 Q 167
Q
Sbjct: 150 Q 150
>gi|325451999|gb|ADZ13564.1| Wuschel [Solanum lycopersicum]
Length = 272
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK- 164
RWTPT Q++IL+ ++ + G +P+ ++I+ I+ +L Q+G+I NV+ WFQN +AR +
Sbjct: 26 RWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 165 RKQLVSSSANTLHN 178
+K+L+++++ T +N
Sbjct: 86 KKRLIAAASATDNN 99
>gi|162459641|ref|NP_001105160.1| WUSCHEL-related homeobox 3A [Zea mays]
gi|61217580|sp|Q70UV1.1|WOX3A_MAIZE RecName: Full=WUSCHEL-related homeobox 3A; AltName: Full=Narrow
sheath protein 1
gi|46917143|emb|CAD60454.1| homeodomain transcription factor [Zea mays]
gi|223975617|gb|ACN31996.1| unknown [Zea mays]
gi|408690290|gb|AFU81605.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414588559|tpg|DAA39130.1| TPA: narrow sheath1 [Zea mays]
Length = 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|188531740|gb|ACD62900.1| wuschel-like protein [Ipomoea nil]
Length = 315
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 97 GGGHKI-SARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
GGG+ + RWTPT Q++IL+ ++ + G +P+ +I+ I+ +L Q+G+I NV+
Sbjct: 35 GGGYLCRQSSTRWTPTTEQIRILKELYYNNGVRSPTADQIQRISAKLRQYGKIEGKNVFY 94
Query: 155 WFQNRRARSKRKQLVSSS 172
WFQN +AR ++K+ ++ S
Sbjct: 95 WFQNHKARERQKKRLTVS 112
>gi|195643474|gb|ACG41205.1| WUSCHEL-related homeobox 3B [Zea mays]
Length = 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|115460964|ref|NP_001054082.1| Os04g0649400 [Oryza sativa Japonica Group]
gi|113565653|dbj|BAF15996.1| Os04g0649400, partial [Oryza sativa Japonica Group]
Length = 232
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+ Q+++LE ++ G TP+ +I+ IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|75296486|sp|Q7XTV3.2|WOX4_ORYSJ RecName: Full=WUSCHEL-related homeobox 4; AltName: Full=OsWOX4
gi|122225920|sp|Q25AM2.1|WOX4_ORYSI RecName: Full=WUSCHEL-related homeobox 4; AltName: Full=OsWOX4
gi|32488911|emb|CAE04492.1| OSJNBb0059K02.2 [Oryza sativa Japonica Group]
gi|38345503|emb|CAD41713.2| OSJNBa0010D21.16 [Oryza sativa Japonica Group]
gi|90399357|emb|CAH68258.1| H0212B02.3 [Oryza sativa Indica Group]
gi|125549998|gb|EAY95820.1| hypothetical protein OsI_17689 [Oryza sativa Indica Group]
gi|125591865|gb|EAZ32215.1| hypothetical protein OsJ_16422 [Oryza sativa Japonica Group]
gi|332650574|gb|AEE81047.1| WUSCHEL-like homeobox protein [Oryza sativa Japonica Group]
Length = 236
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+ Q+++LE ++ G TP+ +I+ IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|449482680|ref|XP_004156369.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 4-like
[Cucumis sativus]
Length = 227
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ ILE ++ +G TP+ Q+I+ IT +L +G+I N + WFQN +AR ++K
Sbjct: 96 RWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNXFYWFQNHKARERQK 155
Query: 167 Q 167
Q
Sbjct: 156 Q 156
>gi|326516770|dbj|BAJ96377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+S GG + R RW P P Q+ ILESIF+ G P+K + I + L + G + + NV+
Sbjct: 34 SSEGGEPTTTRSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFY 93
Query: 155 WFQNRR 160
WFQNRR
Sbjct: 94 WFQNRR 99
>gi|224109366|ref|XP_002315173.1| predicted protein [Populus trichocarpa]
gi|222864213|gb|EEF01344.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I+ I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWNPTTEQVKLLTDLFRSGLRTPSTDEIQNISTQLSFYGKIESKNVFYWFQNHKARERQK 86
Query: 167 Q 167
+
Sbjct: 87 R 87
>gi|229359295|emb|CAT02906.1| putative wuschel homeobox protein WUS [Ginkgo biloba]
Length = 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RW PTP QL IL E + G +PS +I+ I+ +LS++G+I NV+ WFQN +AR ++
Sbjct: 20 RWNPTPEQLSILSELYYRNGIRSPSADQIQRISWKLSRYGKIEGKNVFYWFQNHKARERQ 79
Query: 166 KQLVS 170
K+ +S
Sbjct: 80 KKRLS 84
>gi|356558159|ref|XP_003547375.1| PREDICTED: uncharacterized protein LOC100779632 [Glycine max]
Length = 219
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G H S+ RW+PT Q+ +LE+ + QG TPS ++I++IT L +G I NV+ W
Sbjct: 16 SSGAH--SSVSRWSPTKEQIDMLENFYKQGIRTPSTEQIQQITSRLRAYGYIEGKNVFYW 73
Query: 156 FQNRRA 161
FQN +A
Sbjct: 74 FQNHKA 79
>gi|242067485|ref|XP_002449019.1| hypothetical protein SORBIDRAFT_05g003490 [Sorghum bicolor]
gi|241934862|gb|EES08007.1| hypothetical protein SORBIDRAFT_05g003490 [Sorghum bicolor]
Length = 260
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|154720971|gb|ABS84661.1| WUSCHEL-like protein [Citrus sinensis]
gi|310657307|gb|ADP02393.1| WUSCHEL [Citrus sinensis]
Length = 291
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 83 GRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVEL 141
G+ N +C P RWTPT Q++IL+ ++ + G +P+ ++I++I+ L
Sbjct: 20 GKGNNCHCRPTCP-----------RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARL 68
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANT 175
Q+G+I NV+ WFQN +AR + K+ + S+ +
Sbjct: 69 RQYGKIEGKNVFYWFQNYKARERLKKKIEGSSTS 102
>gi|359486555|ref|XP_002276008.2| PREDICTED: WUSCHEL-related homeobox 5-like [Vitis vinifera]
Length = 176
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 28 RWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQK 87
Query: 167 Q 167
+
Sbjct: 88 R 88
>gi|242078653|ref|XP_002444095.1| hypothetical protein SORBIDRAFT_07g007600 [Sorghum bicolor]
gi|241940445|gb|EES13590.1| hypothetical protein SORBIDRAFT_07g007600 [Sorghum bicolor]
Length = 282
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG +AR RW P P Q+ ILESIF+ G P+K + I L + G + + NV+ WFQ
Sbjct: 17 GGEPTTARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQ 76
Query: 158 NRR 160
NRR
Sbjct: 77 NRR 79
>gi|449434164|ref|XP_004134866.1| PREDICTED: protein WUSCHEL-like [Cucumis sativus]
gi|449491364|ref|XP_004158873.1| PREDICTED: protein WUSCHEL-like [Cucumis sativus]
Length = 304
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 39 RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 98
Query: 166 KQLVSS 171
K+ +S
Sbjct: 99 KKRFTS 104
>gi|357492585|ref|XP_003616581.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355517916|gb|AES99539.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 184
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 33 RWNPTTEQVKLLTELFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 92
Query: 167 Q 167
+
Sbjct: 93 R 93
>gi|296086089|emb|CBI31530.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 28 RWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQK 87
Query: 167 Q 167
+
Sbjct: 88 R 88
>gi|163838710|ref|NP_001106240.1| WUSCHEL-related homeobox 3B [Zea mays]
gi|159232380|emb|CAM33396.1| WUSCHEL-related homeobox 3B [Zea mays]
Length = 234
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PTP QL +LE + G TP+ +I++IT L+ +G+I NV+ FQN +AR ++K
Sbjct: 16 RWCPTPEQLMVLEETYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYCFQNHKARDRQK 75
>gi|414588560|tpg|DAA39131.1| TPA: narrow sheath1 [Zea mays]
Length = 193
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|147857701|emb|CAN80814.1| hypothetical protein VITISV_020465 [Vitis vinifera]
Length = 280
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 37 RWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 96
Query: 166 KQLVSSSANTLHNGGGGG 183
K+ ++ + G G
Sbjct: 97 KKRFTTDMPMQRSLGNAG 114
>gi|46408855|emb|CAD88982.1| Homeobox protein HB3 [Oryza sativa Japonica Group]
Length = 238
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+ Q+++LE ++ G TP+ +I+ IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 167 Q 167
Q
Sbjct: 152 Q 152
>gi|225431151|ref|XP_002266323.1| PREDICTED: protein WUSCHEL [Vitis vinifera]
gi|297735020|emb|CBI17382.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 37 RWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 96
Query: 166 KQLVSSSANTLHNGGGGG 183
K+ ++ + G G
Sbjct: 97 KKRFTTDMPMQRSLGNAG 114
>gi|380294101|gb|AFD50636.1| WUSCHEL, partial [Brassica napus]
Length = 214
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I++I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 36 RWTPTTEQIRILKDLYYNSGVRSPTADQIQKISARLRQYGKIEGKNVFYWFQNHKARERQ 95
Query: 166 KQ 167
K+
Sbjct: 96 KK 97
>gi|356540807|ref|XP_003538876.1| PREDICTED: protein WUSCHEL-like [Glycine max]
Length = 324
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 70 RWTPTNDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 129
Query: 166 KQLVSSSAN 174
K+ + N
Sbjct: 130 KKRFTFDHN 138
>gi|380848564|emb|CBX45518.1| hypothetical protein, partial [Ophioglossum lusitanicum]
Length = 40
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQ+LE +F Q +GTP+KQ IKEIT EL QHG ISETNVY
Sbjct: 1 QLQVLEMMFQQSSGTPNKQNIKEITAELVQHGPISETNVY 40
>gi|89330199|emb|CAJ84158.1| WOX5/7B protein [Populus trichocarpa]
Length = 65
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I+ I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTTEQVKLLTDLFRSGLRTPSTDEIQNISTQLSFYGKIESKNVFYWFQNHKARERQK 64
Query: 167 Q 167
+
Sbjct: 65 R 65
>gi|449517882|ref|XP_004165973.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ LS +G+I NV+ WFQN +AR ++K
Sbjct: 36 RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 95
Query: 167 Q 167
+
Sbjct: 96 R 96
>gi|449441600|ref|XP_004138570.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+++L +F G TPS +I++I+ LS +G+I NV+ WFQN +AR ++K
Sbjct: 36 RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 95
Query: 167 Q 167
+
Sbjct: 96 R 96
>gi|151347432|gb|ABS01330.1| WUSCHEL protein [Streptocarpus rexii]
Length = 273
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 31 RWTPTTDQIRILKDLYYNNGLRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 90
Query: 166 KQ 167
K+
Sbjct: 91 KK 92
>gi|390124504|emb|CCE89082.1| transcription factor WUS [Helianthus annuus]
Length = 293
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I +L Q+G+I NV+ WFQN +AR ++
Sbjct: 29 RWTPTSDQIRILKELYYNNGIRSPTADQIQRIAAQLRQYGKIEGKNVFYWFQNHKARERQ 88
Query: 166 KQLVSSSA 173
K+ + +A
Sbjct: 89 KKRFTPTA 96
>gi|116811068|emb|CAJ84142.1| WOX4 protein [Oryza sativa]
Length = 65
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW P+ Q+++LE ++ G TP+ +I+ IT EL ++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 64
Query: 167 Q 167
Q
Sbjct: 65 Q 65
>gi|159232360|emb|CAM32353.1| putative narrow sheath protein [Oryza sativa]
Length = 234
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|380848560|emb|CBX45516.1| hypothetical protein, partial [Psilotum nudum]
Length = 40
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 33/40 (82%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQILE IF G+GTP+KQKIK IT ELS HG ISETNVY
Sbjct: 1 QLQILERIFALGSGTPNKQKIKGITAELSYHGHISETNVY 40
>gi|159232352|emb|CAM32349.1| putative wuschel homeobox protein [Zea mays]
gi|414879656|tpg|DAA56787.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 221
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR +
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARER 71
>gi|159232350|emb|CAM32348.1| putative wuschel homeobox protein [Zea mays]
Length = 272
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
RW PTP Q+++L +F G TPS +I+ I+ L G++ NV+ WFQN +AR
Sbjct: 52 RWNPTPEQVKVLTELFHAGLRTPSADQIQRISAHLGAFGKVESKNVFYWFQNHKAR 107
>gi|195644734|gb|ACG41835.1| WUSCHEL-related homeobox 5 [Zea mays]
Length = 220
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR +
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARER 71
>gi|326489655|dbj|BAK01808.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 94 MTSGGGHKIS------ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQI 147
M GGGH R RWTP P Q+ ILESIF+ G P K + I L + G +
Sbjct: 1 MDGGGGHSPDLQPAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAV 60
Query: 148 SETNVYNWFQNRR 160
+ NV+ WFQNRR
Sbjct: 61 GDANVFYWFQNRR 73
>gi|115475489|ref|NP_001061341.1| Os08g0242400 [Oryza sativa Japonica Group]
gi|75294132|sp|Q6Z3L4.1|WOX10_ORYSJ RecName: Full=WUSCHEL-related homeobox 10; AltName: Full=OsWOX10;
AltName: Full=Protein WOX11/12
gi|40253638|dbj|BAD05582.1| putative homeodomain protein [Oryza sativa Japonica Group]
gi|113623310|dbj|BAF23255.1| Os08g0242400 [Oryza sativa Japonica Group]
gi|125602679|gb|EAZ42004.1| hypothetical protein OsJ_26553 [Oryza sativa Japonica Group]
Length = 284
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
SGGG AR RW P P Q+ ILESIF+ G P+K + I L + G + + NV+ W
Sbjct: 34 SGGGEP--ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYW 91
Query: 156 FQNRR 160
FQNRR
Sbjct: 92 FQNRR 96
>gi|229359309|emb|CAT02913.1| putative wuschel homeobox protein WOX3 [Acorus calamus]
Length = 54
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
W PTP QL ILE ++ G TP+ +I++IT LS +G+I NV+ WFQN +A
Sbjct: 1 WNPTPEQLMILEEVYRSGVRTPNATQIQQITAHLSYYGKIEGKNVFYWFQNHKA 54
>gi|160221293|sp|A2YST1.1|WOX10_ORYSI RecName: Full=WUSCHEL-related homeobox 10; AltName: Full=OsWOX10;
AltName: Full=Protein WOX11/12
gi|125560694|gb|EAZ06142.1| hypothetical protein OsI_28376 [Oryza sativa Indica Group]
Length = 284
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
SGGG AR RW P P Q+ ILESIF+ G P+K + I L + G + + NV+ W
Sbjct: 34 SGGGEP--ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYW 91
Query: 156 FQNRR 160
FQNRR
Sbjct: 92 FQNRR 96
>gi|229359357|emb|CAT02938.1| putative wuschel homeobox protein WUS [Pinus sylvestris]
Length = 245
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 43/61 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ +L+ ++ G TP+ ++I++I+ +L ++G+I NV+ WFQN +AR ++K
Sbjct: 11 RWNPTAEQVTLLKELYRSGMRTPTAEQIQQISSQLKRYGKIEGKNVFYWFQNHKARERQK 70
Query: 167 Q 167
+
Sbjct: 71 R 71
>gi|413947394|gb|AFW80043.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 439
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ +PS ++I+ IT L QHG+I NV+ WFQN +AR ++
Sbjct: 303 RWTPTLEQIRMLKELYYGCDIRSPSSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 362
Query: 166 KQLVSSSANTLHNGGG 181
K+ ++ S + G G
Sbjct: 363 KRRLTGSTSWPRGGRG 378
>gi|255579795|ref|XP_002530735.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223529699|gb|EEF31641.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 297
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ ++I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 40 RWTPTTDQIRILKDLYYNSGVRSPTGEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 99
Query: 166 KQLVSS 171
K+ ++
Sbjct: 100 KKRFTT 105
>gi|122249045|sp|Q33DK1.1|WOX3_ORYSJ RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=OsNS;
AltName: Full=OsWOX3
gi|160221296|sp|A2ZH47.1|WOX3_ORYSI RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=OsNS;
AltName: Full=OsWOX3
gi|77548299|gb|ABA91096.1| Homeobox domain containing protein [Oryza sativa Japonica Group]
gi|77552774|gb|ABA95570.1| Homeobox domain containing protein [Oryza sativa Japonica Group]
gi|81686872|dbj|BAE48302.1| OsWOX3 protein [Oryza sativa Japonica Group]
gi|125535443|gb|EAY81931.1| hypothetical protein OsI_37108 [Oryza sativa Indica Group]
gi|125575910|gb|EAZ17132.1| hypothetical protein OsJ_32633 [Oryza sativa Japonica Group]
Length = 203
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|242059271|ref|XP_002458781.1| hypothetical protein SORBIDRAFT_03g040210 [Sorghum bicolor]
gi|241930756|gb|EES03901.1| hypothetical protein SORBIDRAFT_03g040210 [Sorghum bicolor]
Length = 218
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR +
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARER 71
>gi|357140023|ref|XP_003571573.1| PREDICTED: WUSCHEL-related homeobox 10-like [Brachypodium
distachyon]
Length = 242
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
G G + +AR RW P P Q+ ILESIF+ G P+K + I L + G + + NV+ W
Sbjct: 17 CGEGAEPAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYW 76
Query: 156 FQNRR 160
FQNRR
Sbjct: 77 FQNRR 81
>gi|226431054|gb|ACO55494.1| wuschel 2 [Populus tomentosa]
Length = 264
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RWTPT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 14 GGAKGNFLCRQTST-----------RWTPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 62
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L ++G+I NV+ WFQN +AR ++K+ ++
Sbjct: 63 LRKYGKIEGKNVFYWFQNHKARERQKKRLT 92
>gi|413951878|gb|AFW84527.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 235
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
RW PTP Q+++L +F G TPS +I+ I+ L G++ NV+ WFQN +AR
Sbjct: 16 RWNPTPEQVKVLTELFRAGLRTPSTDQIQRISAHLGAFGKVESKNVFYWFQNHKAR 71
>gi|413917169|gb|AFW57101.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 294
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C+P + +AR RW P P Q+ ILESIF+ G P+K + I L + G + +
Sbjct: 26 CEPATAA------AARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRD 79
Query: 150 TNVYNWFQNRR 160
NV+ WFQNRR
Sbjct: 80 ANVFYWFQNRR 90
>gi|357155614|ref|XP_003577178.1| PREDICTED: WUSCHEL-related homeobox 3B-like [Brachypodium
distachyon]
Length = 192
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
RW PTP QL ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 8 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|226497890|ref|NP_001147238.1| WUSCHEL-related homeobox 11 [Zea mays]
gi|195608920|gb|ACG26290.1| WUSCHEL-related homeobox 11 [Zea mays]
Length = 294
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C+P + +AR RW P P Q+ ILESIF+ G P+K + I L + G + +
Sbjct: 26 CEPATAA------AARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRD 79
Query: 150 TNVYNWFQNRR 160
NV+ WFQNRR
Sbjct: 80 ANVFYWFQNRR 90
>gi|4090200|emb|CAA09986.1| WUSCHEL protein [Arabidopsis thaliana]
Length = 291
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
SGG RWTPT Q++IL+ ++ + +P+ +I++IT L Q G+I NV+
Sbjct: 26 SGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFY 85
Query: 155 WFQNRRARSKRKQ 167
WFQN +AR ++K+
Sbjct: 86 WFQNHKARERQKK 98
>gi|224108315|ref|XP_002314802.1| predicted protein [Populus trichocarpa]
gi|222863842|gb|EEF00973.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL LE + G TP+ +I++IT EL + G+I NV+ WFQN +AR ++K
Sbjct: 68 RWNPTAEQLLALEEKYSCGVRTPTTNQIQQITSELRRFGKIEGKNVFYWFQNHKARERQK 127
>gi|326497121|dbj|BAK02145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR---- 162
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSALGKVESKNVFYWFQNHKARERHH 73
Query: 163 -SKRKQLVSSSANTLHNGGGGGAGAGAGGAD 192
KR+++ S S + + G A AD
Sbjct: 74 HKKRRRVASPSCSPDSSSNEEETGRAAEPAD 104
>gi|300174958|dbj|BAJ10714.1| WUSCHEL ortholog [Weddellina squamulosa]
Length = 260
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 27 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 86
Query: 166 KQLVSS 171
K+ ++
Sbjct: 87 KKRFTA 92
>gi|229359349|emb|CAT02933.1| putative wuschel homeobox protein WOX9 [Pinus sylvestris]
Length = 52
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW P P Q+QILE IF+ G P ++ IK+IT +L + G + E N++ WFQ
Sbjct: 2 RWNPKPEQVQILEEIFNSGQVNPKREGIKKITTQLQEFGDVGEANIFYWFQ 52
>gi|300174942|dbj|BAJ10706.1| WUSCHEL ortholog [Hydrobryum japonicum]
Length = 219
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 26 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 166 KQLVSS 171
K+ ++
Sbjct: 86 KKRFTT 91
>gi|229359333|emb|CAT02925.1| putative wuschel homeobox protein WOX9 [Amborella trichopoda]
Length = 52
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
W+P P Q++ILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQN
Sbjct: 1 WSPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQN 51
>gi|224101109|ref|XP_002312145.1| predicted protein [Populus trichocarpa]
gi|222851965|gb|EEE89512.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 79 AAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT 138
A GG GN Y G K RW PT Q ++L +F G TPS +I+ I+
Sbjct: 13 AGRGGSSGNNY-------ASGTKCG---RWNPTIEQGKLLTDLFRSGVRTPSTDEIQNIS 62
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQ 167
LS +G+I NV+ WFQN +AR ++K+
Sbjct: 63 TRLSFYGKIESKNVFYWFQNHKARERQKR 91
>gi|226431052|gb|ACO55493.1| wuschel 1 [Populus tomentosa]
gi|429326656|gb|AFZ78668.1| Wuschel [Populus tomentosa]
Length = 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RWTPT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 20 GGAKGNFICRQTST-----------RWTPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 68
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANT 175
L ++G+I NV+ WFQN +AR ++K+ ++ T
Sbjct: 69 LRKYGKIEGKNVFYWFQNHKARERQKKRFTNDVPT 103
>gi|224134106|ref|XP_002327757.1| predicted protein [Populus trichocarpa]
gi|222836842|gb|EEE75235.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RWTPT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 20 GGAKGNFICRQTST-----------RWTPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 68
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANT 175
L ++G+I NV+ WFQN +AR ++K+ ++ T
Sbjct: 69 LRKYGKIEGKNVFYWFQNHKARERQKKRFTNDVPT 103
>gi|89330205|emb|CAJ84161.1| WOX5A protein [Zea mays]
Length = 65
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PTP Q+++L +F G TPS +I+ I+ L G++ NV+ WFQN +AR +
Sbjct: 5 RWNPTPEQVKVLTELFHAGLRTPSADQIQRISAHLGAFGKVESKNVFYWFQNHKARER 62
>gi|229359291|emb|CAT02904.1| putative wuschel homeobox protein WOX3B [Ginkgo biloba]
Length = 178
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW TP QL ILE I+ G + +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 35 RWNSTPEQLMILEDIYRGGIQNLTAVQIQQITAHLSLYGKIEGKNVFYWFQNHKARDRQK 94
>gi|116831083|gb|ABK28496.1| unknown [Arabidopsis thaliana]
Length = 293
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + +P+ +I++IT L Q G+I NV+ WFQN +AR ++
Sbjct: 38 RWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQ 97
Query: 166 KQ 167
K+
Sbjct: 98 KK 99
>gi|18398572|ref|NP_565429.1| protein WUSCHEL [Arabidopsis thaliana]
gi|61217041|sp|Q9SB92.2|WUS_ARATH RecName: Full=Protein WUSCHEL; Short=AtWUS; AltName: Full=Plant
growth activator 6
gi|20197596|gb|AAD20131.2| putative homeodomain transcription factor (WUSCHEL, WUS)
[Arabidopsis thaliana]
gi|21592502|gb|AAM64452.1| putative homeodomain transcription factor (WUSCHEL, WUS)
[Arabidopsis thaliana]
gi|91806188|gb|ABE65822.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|114050597|gb|ABI49448.1| At2g17950 [Arabidopsis thaliana]
gi|330251610|gb|AEC06704.1| protein WUSCHEL [Arabidopsis thaliana]
Length = 292
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + +P+ +I++IT L Q G+I NV+ WFQN +AR ++
Sbjct: 38 RWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQ 97
Query: 166 KQ 167
K+
Sbjct: 98 KK 99
>gi|300174966|dbj|BAJ10718.1| WUSCHEL ortholog [Terniopsis minor]
Length = 313
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 36 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 95
Query: 166 KQLVSS 171
K+ ++
Sbjct: 96 KKRFTA 101
>gi|300174954|dbj|BAJ10712.1| WUSCHEL ortholog [Polypleurum stylosum]
Length = 224
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 26 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 166 KQLVSS 171
K+ ++
Sbjct: 86 KKRFTT 91
>gi|89330197|emb|CAJ84157.1| WOX5/7A protein [Populus trichocarpa]
Length = 65
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q ++L +F G TPS +I+ I+ LS +G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTIEQGKLLTDLFRSGVRTPSTDEIQNISTRLSFYGKIESKNVFYWFQNHKARERQK 64
Query: 167 Q 167
+
Sbjct: 65 R 65
>gi|300174948|dbj|BAJ10709.1| WUSCHEL ortholog [Cladopus doianus]
Length = 222
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ + G +P+ +I+ I+ L Q+G+I NV+ WFQN +AR ++
Sbjct: 26 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 166 KQLVSS 171
K+ ++
Sbjct: 86 KKRFTT 91
>gi|372126558|gb|AEX88468.1| homeobox transcription factor WOX5 [Pisum sativum]
gi|372126560|gb|AEX88469.1| homeobox transcription factor WOX5 [Pisum sativum]
Length = 175
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q++ L +F G TPS +I++I+ +LS +G+I NV+ WFQN +AR ++K
Sbjct: 21 RWNPTTEQVKHLTQLFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 80
Query: 167 Q 167
+
Sbjct: 81 R 81
>gi|429326658|gb|AFZ78669.1| Wuschel [Populus tomentosa]
Length = 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RWTPT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 14 GGAKGNFLCRQTST-----------RWTPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 62
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L ++G+I NV+ WFQN +AR ++K+ ++
Sbjct: 63 LRKYGKIEGKNVFYWFQNHKARERQKKRLT 92
>gi|361066801|gb|AEW07712.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154412|gb|AFG59345.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154417|gb|AFG59350.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSL 202
QHGQISETNVYNWFQNR+AR+KRKQL S G D E E
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQLPSQR-----------GGESENETDDEYPGEKRFK 49
Query: 203 LLHDEHKTTKPENLSSAHSTSQPQ 226
HD + +N S HS + PQ
Sbjct: 50 PQHD----SNAQNPKSGHSEADPQ 69
>gi|383154413|gb|AFG59346.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154414|gb|AFG59347.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSL 202
QHGQISETNVYNWFQNR+AR+KRKQL S G D E E
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQLPSQR-----------GGESENETDDEYPGEKRFK 49
Query: 203 LLHDEHKTTKPENLSSAHSTSQPQ 226
HD + +N S HS + PQ
Sbjct: 50 PQHD----SNAQNPKSGHSEADPQ 69
>gi|89330207|emb|CAJ84162.1| WOX5B protein [Zea mays]
gi|116811070|emb|CAJ84143.1| WOX5 protein [Oryza sativa]
Length = 65
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PT Q+++L +F G TPS ++I+ I+ LS G++ NV+ WFQN +AR +
Sbjct: 5 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARER 62
>gi|383154415|gb|AFG59348.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154416|gb|AFG59349.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 143 QHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSL 202
QHGQISETNVYNWFQNR+AR+KRKQL S G D E E
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQLPSQR-----------GGESENETDDEYPGEKRFK 49
Query: 203 LLHDEHKTTKPENLSSAHSTSQPQ 226
HD + +N S HS + PQ
Sbjct: 50 PQHD----SNAQNPKSGHSEADPQ 69
>gi|229359433|emb|CAT02937.2| putative wuschel homeobox protein WOX2 [Pinus sylvestris]
Length = 189
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT Q+ LE+++ QG TPS +I+EI L +G I NV+ WFQN +AR +++
Sbjct: 11 RWNPTKEQIDFLEAMYSQGIRTPSADQIEEIASRLRMYGNIEGKNVFYWFQNHKARERQR 70
Query: 167 QLVSSSA--NTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAH-STS 223
Q A N H G + ++ S + E KT N +H S +
Sbjct: 71 QRQERVAFVNQFHQPPGFAELLPPQQRSTTTLSKAGSSMAPREEKTY---NFQHSHDSLN 127
Query: 224 QPQHLRNLPPTP 235
+PQ L P P
Sbjct: 128 EPQTLELFPLHP 139
>gi|116811076|emb|CAJ84146.1| WOX11/12 protein [Oryza sativa]
Length = 65
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
AR RW P P Q+ ILESIF+ G +P+K + I L + G + + NV+ WFQNRR
Sbjct: 2 ARSRWAPKPEQILILESIFNSGMVSPAKDETARIRRLLERFGAVRDANVFYWFQNRR 58
>gi|229359299|emb|CAT02908.1| putative wuschel homeobox protein WOX9 [Ginkgo biloba]
Length = 54
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
+ RW P P Q++ILE+IF+ G P + +I+ I +L + GQ+ + NV+ WFQ
Sbjct: 2 KPRWNPKPXQIRILEAIFNSGMVNPPRDEIRRIRTQLQEFGQVGDANVFYWFQ 54
>gi|297811943|ref|XP_002873855.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319692|gb|EFH50114.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF+ GT P K + I L + G + + NV+ WFQNRR
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRR 74
>gi|115474147|ref|NP_001060672.1| Os07g0684900 [Oryza sativa Japonica Group]
gi|122166923|sp|Q0D3I7.1|WOX11_ORYSJ RecName: Full=WUSCHEL-related homeobox 11; AltName: Full=OsWOX11
gi|113612208|dbj|BAF22586.1| Os07g0684900 [Oryza sativa Japonica Group]
gi|215693357|dbj|BAG88739.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706892|dbj|BAG93352.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200278|gb|EEC82705.1| hypothetical protein OsI_27375 [Oryza sativa Indica Group]
gi|222637704|gb|EEE67836.1| hypothetical protein OsJ_25623 [Oryza sativa Japonica Group]
Length = 262
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 19 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 75
>gi|312861913|gb|ADR10436.1| putative wuschel homeobox protein WOX2 [Pinus contorta]
Length = 187
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
RW PT Q+ LE+++ QG TPS +I+EI L +G I NV+ WFQN +A
Sbjct: 11 RWNPTKEQIDFLEAMYSQGIRTPSADQIEEIASRLRMYGNIEGKNVFYWFQNHKA 65
>gi|357131303|ref|XP_003567278.1| PREDICTED: WUSCHEL-related homeobox 9-like [Brachypodium
distachyon]
Length = 209
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RW PT Q+++L +F G TPS ++I+ I+ L G++ NV+ WFQN +AR +
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLGAFGKVESKNVFYWFQNHKARER 71
>gi|224555005|gb|ACN56438.1| WUSCHEL-like protein 1 [Ocotea catharinensis]
Length = 259
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN+ C T RW PT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 14 GGANGNLLCRQTST-----------RWNPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 62
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L ++G+I NV+ WFQN +AR ++K+ ++
Sbjct: 63 LRKYGKIEGKNVFYWFQNHKARERQKKSLT 92
>gi|449437944|ref|XP_004136750.1| PREDICTED: WUSCHEL-related homeobox 11-like [Cucumis sativus]
Length = 257
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR+RS
Sbjct: 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRS 80
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAG 189
+R+Q +A T H G G G
Sbjct: 81 RRRQRQLQAAAT-HQGSTGAIHYDCG 105
>gi|30686531|ref|NP_197283.2| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|334187736|ref|NP_001190327.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|61217632|sp|Q8GY25.1|WOX12_ARATH RecName: Full=WUSCHEL-related homeobox 12
gi|26450882|dbj|BAC42548.1| unknown protein [Arabidopsis thaliana]
gi|30017295|gb|AAP12881.1| At5g17810 [Arabidopsis thaliana]
gi|37955225|gb|AAP37141.1| WOX12 protein [Arabidopsis thaliana]
gi|332005089|gb|AED92472.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|332005090|gb|AED92473.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
Length = 268
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF+ GT P K + I L + G + + NV+ WFQNRR
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRR 74
>gi|359481008|ref|XP_002269282.2| PREDICTED: WUSCHEL-related homeobox 11-like [Vitis vinifera]
gi|296085887|emb|CBI31211.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R RWTP P Q+ ILESIF+ G P K + I L +G + + NV+ WFQNRR+RS
Sbjct: 16 VRSRWTPKPEQIIILESIFNSGMVNPPKDETVRIRKLLEPYGSVGDANVFYWFQNRRSRS 75
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAGGA 191
+R+Q ++ G GA A AGGA
Sbjct: 76 RRRQRQIQASLA----GDRGAQAHAGGA 99
>gi|75296370|sp|Q7XM13.2|WOX1A_ORYSJ RecName: Full=WUSCHEL-related homeobox 1A; AltName: Full=OsWOX1A;
Short=OsWOX1; AltName: Full=Protein WUS
gi|38346078|emb|CAE04846.2| OSJNBa0084K01.18 [Oryza sativa Japonica Group]
gi|116811060|emb|CAJ84138.1| WUS protein [Oryza sativa]
Length = 289
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 166 KQ 167
K+
Sbjct: 95 KK 96
>gi|9759058|dbj|BAB09580.1| unnamed protein product [Arabidopsis thaliana]
Length = 219
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF+ GT P K + I L + G + + NV+ WFQNRR
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRR 74
>gi|422898303|dbj|BAM67020.1| hypothetical protein [Silene latifolia]
Length = 317
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ + G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 33 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 92
Query: 166 KQLVSSSAN 174
K+ ++ N
Sbjct: 93 KKRLTPPTN 101
>gi|224094963|ref|XP_002310306.1| predicted protein [Populus trichocarpa]
gi|222853209|gb|EEE90756.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RW PT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 14 GGAKGNFLCRQTST-----------RWNPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 62
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L ++G+I NV+ WFQN +AR ++K+ ++
Sbjct: 63 LRKYGKIEGKNVFYWFQNHKARERQKKRLT 92
>gi|116811088|emb|CAJ84152.1| WOX6 protein [Populus trichocarpa]
Length = 65
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
RW PT QL LE + G TP+ +I++IT EL + G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTAEQLLALEEKYSCGVRTPTTNQIQQITSELRRFGKIEGKNVFYWFQNHKARERQK 64
>gi|422898313|dbj|BAM67025.1| protein WUSCHEL-like [Silene vulgaris]
Length = 270
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 99 GHKISARQ---RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
G RQ RWTPT Q+++L+ ++ + G +P+ +I+ I L ++G+I NV+
Sbjct: 14 GSNFLCRQSSTRWTPTTEQIKLLKELYYNNGVRSPTADQIQAICSRLRRYGKIEGKNVFY 73
Query: 155 WFQNRRARSKRKQLVS 170
WFQN +AR ++K+ ++
Sbjct: 74 WFQNHKARERQKKRLT 89
>gi|422898307|dbj|BAM67022.1| protein WUSCHEL-like [Silene diclinis]
Length = 319
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ + G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 91
Query: 166 KQLVSSSAN 174
K+ ++ N
Sbjct: 92 KKRLTPPTN 100
>gi|422898311|dbj|BAM67024.1| protein WUSCHEL-like [Silene dioica]
Length = 319
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ + G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 91
Query: 166 KQLVSSSAN 174
K+ ++ N
Sbjct: 92 KKRLTPPTN 100
>gi|116309856|emb|CAH66891.1| OSIGBa0099L20.6 [Oryza sativa Indica Group]
Length = 288
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 166 KQ 167
K+
Sbjct: 95 KK 96
>gi|229359353|emb|CAT02935.1| putative wuschel homeobox protein WOX4 [Pinus sylvestris]
Length = 52
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW PTP Q++ILE + G TP+ ++I+ IT +L Q+G+I NV+ WFQ
Sbjct: 2 RWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFYWFQ 52
>gi|81686885|dbj|BAE48303.1| OsWUS protein [Oryza sativa Japonica Group]
Length = 289
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 166 KQ 167
K+
Sbjct: 95 KK 96
>gi|160221319|sp|Q33DK0.2|WOX1B_ORYSJ RecName: Full=WUSCHEL-related homeobox 1B; AltName: Full=OsWOX1B;
AltName: Full=OsWUS
Length = 289
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 166 KQ 167
K+
Sbjct: 95 KK 96
>gi|218195765|gb|EEC78192.1| hypothetical protein OsI_17799 [Oryza sativa Indica Group]
Length = 285
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 91
Query: 166 KQ 167
K+
Sbjct: 92 KK 93
>gi|356504334|ref|XP_003520951.1| PREDICTED: WUSCHEL-related homeobox 11-like [Glycine max]
Length = 295
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 28 AVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRR 85
>gi|242046976|ref|XP_002461234.1| hypothetical protein SORBIDRAFT_02g043300 [Sorghum bicolor]
gi|241924611|gb|EER97755.1| hypothetical protein SORBIDRAFT_02g043300 [Sorghum bicolor]
Length = 283
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 16 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 72
>gi|229359339|emb|CAT02928.1| putative wuschel homeobox protein WOX4 [Gnetum gnemon]
Length = 52
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW PTP Q++ILE + G TP+ ++I+ IT +L Q+G+I NV+ WFQ
Sbjct: 2 RWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFYWFQ 52
>gi|116811062|emb|CAJ84139.1| WUS protein [Populus trichocarpa]
Length = 259
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVE 140
GG GN C T RW PT Q++IL+ ++ +G +P+ +I++I+
Sbjct: 14 GGAKGNFLCRQTST-----------RWNPTTDQIRILKELYYIKGVRSPNGAEIQQISAR 62
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L ++G+I NV+ WFQN +AR ++K+ ++
Sbjct: 63 LRKYGKIEGKNVFYWFQNHKARERQKKRLT 92
>gi|222629719|gb|EEE61851.1| hypothetical protein OsJ_16519 [Oryza sativa Japonica Group]
Length = 286
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 91
Query: 166 KQ 167
K+
Sbjct: 92 KK 93
>gi|224144863|ref|XP_002325442.1| predicted protein [Populus trichocarpa]
gi|222862317|gb|EEE99823.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR+RS
Sbjct: 23 VRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEKFGSVGDANVFYWFQNRRSRS 82
Query: 164 KRKQLVSSSANTLHNGG---------GGGAGAGAGGADSEVET 197
+R+Q ++ NG G + G G D VE+
Sbjct: 83 RRRQRQMQASGGTSNGFANSPSSYLVGASSSCGVVGEDHGVES 125
>gi|195608400|gb|ACG26030.1| homeobox domain containing protein [Zea mays]
Length = 315
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 34 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 90
>gi|356570353|ref|XP_003553354.1| PREDICTED: WUSCHEL-related homeobox 11-like [Glycine max]
Length = 280
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 25 AVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRRLLEKFGAVGDANVFYWFQNRR 82
>gi|255569408|ref|XP_002525671.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223534971|gb|EEF36654.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 261
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 24 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRR 80
>gi|238014208|gb|ACR38139.1| unknown [Zea mays]
Length = 315
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 34 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 90
>gi|115452769|ref|NP_001049985.1| Os03g0325600 [Oryza sativa Japonica Group]
gi|122247076|sp|Q10M29.1|WOX6_ORYSJ RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=OsWOX6
gi|108707914|gb|ABF95709.1| Homeobox domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548456|dbj|BAF11899.1| Os03g0325600 [Oryza sativa Japonica Group]
Length = 328
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 95
>gi|357116012|ref|XP_003559779.1| PREDICTED: WUSCHEL-related homeobox 11-like [Brachypodium
distachyon]
Length = 274
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG + + R RWTP P Q+ ILESIF+ G P K + I L + G +++ NV+ WFQ
Sbjct: 18 GGGEAAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLQRFGPVADANVFYWFQ 77
Query: 158 NRR 160
NRR
Sbjct: 78 NRR 80
>gi|160221298|sp|A2XG77.1|WOX6_ORYSI RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=OsWOX6
gi|125543698|gb|EAY89837.1| hypothetical protein OsI_11385 [Oryza sativa Indica Group]
Length = 328
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 95
>gi|413955853|gb|AFW88502.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 419
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 118 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 174
>gi|224123922|ref|XP_002319197.1| predicted protein [Populus trichocarpa]
gi|224123926|ref|XP_002319198.1| predicted protein [Populus trichocarpa]
gi|222857573|gb|EEE95120.1| predicted protein [Populus trichocarpa]
gi|222857574|gb|EEE95121.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 23 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRR 79
>gi|167593907|gb|ABZ85640.1| At3g03660 [Arabidopsis thaliana]
gi|167593909|gb|ABZ85641.1| At3g03660 [Arabidopsis thaliana]
gi|167593911|gb|ABZ85642.1| At3g03660 [Arabidopsis thaliana]
gi|167593913|gb|ABZ85643.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 69 VFYWFQNRR 77
>gi|413955852|gb|AFW88501.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 399
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 118 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 174
>gi|167593893|gb|ABZ85633.1| At3g03660 [Arabidopsis thaliana]
gi|167593901|gb|ABZ85637.1| At3g03660 [Arabidopsis thaliana]
gi|167593903|gb|ABZ85638.1| At3g03660 [Arabidopsis thaliana]
gi|167593905|gb|ABZ85639.1| At3g03660 [Arabidopsis thaliana]
gi|167593915|gb|ABZ85644.1| At3g03660 [Arabidopsis thaliana]
gi|167593917|gb|ABZ85645.1| At3g03660 [Arabidopsis thaliana]
gi|167593919|gb|ABZ85646.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 69 VFYWFQNRR 77
>gi|37955223|gb|AAP37140.1| WOX11 protein [Arabidopsis thaliana]
Length = 268
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 78 VFYWFQNRR 86
>gi|357162515|ref|XP_003579436.1| PREDICTED: WUSCHEL-related homeobox 1A-like [Brachypodium
distachyon]
Length = 295
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQIL-ESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL E + G +P+ ++I+ I L Q+G+I NV+ WFQN +AR +
Sbjct: 20 RWTPTAEQVRILRELYYGLGIRSPNAEQIQRIAGRLRQYGRIEGKNVFYWFQNHKARERH 79
Query: 166 KQLVSS 171
K+ +++
Sbjct: 80 KKRLTT 85
>gi|89330195|emb|CAJ84156.1| WOX11/12B protein [Populus trichocarpa]
Length = 65
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR+RS+
Sbjct: 3 RSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEKFGSVGDANVFYWFQNRRSRSR 62
Query: 165 RKQ 167
R+Q
Sbjct: 63 RRQ 65
>gi|108707915|gb|ABF95710.1| Homeobox domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|215766887|dbj|BAG99115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 356
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 95
>gi|89330193|emb|CAJ84155.1| WOX11/12A protein [Populus trichocarpa]
Length = 65
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR+RS+
Sbjct: 3 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSR 62
Query: 165 RKQ 167
R+Q
Sbjct: 63 RRQ 65
>gi|145338074|ref|NP_187016.2| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
gi|342187324|sp|Q6X7J3.2|WOX11_ARATH RecName: Full=WUSCHEL-related homeobox 11
gi|332640447|gb|AEE73968.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
Length = 268
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 78 VFYWFQNRR 86
>gi|167593895|gb|ABZ85634.1| At3g03660 [Arabidopsis thaliana]
gi|167593899|gb|ABZ85636.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 69 VFYWFQNRR 77
>gi|89330215|emb|CAJ84166.1| WOX11/12A protein [Zea mays]
gi|89330217|emb|CAJ84167.1| WOX11/12B protein [Zea mays]
Length = 65
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR+RS+
Sbjct: 3 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSR 62
Query: 165 RKQ 167
R+Q
Sbjct: 63 RRQ 65
>gi|186509725|ref|NP_001118563.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
gi|332640448|gb|AEE73969.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
Length = 297
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 78 VFYWFQNRR 86
>gi|229359313|emb|CAT02915.1| putative wuschel homeobox protein WOX4 [Acorus calamus]
Length = 52
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
W PT Q+ ILE+++ G TP+ +I+ ITV+LS++G+I NV+ WFQN
Sbjct: 1 WNPTVEQITILEALYKGGMHTPNATEIERITVDLSKYGRIEGKNVFYWFQN 51
>gi|380848554|emb|CBX45513.1| hypothetical protein, partial [Equisetum giganteum]
Length = 40
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQILE +FD+G PSK+KIKE T +L +HG ISETNVY
Sbjct: 1 QLQILEELFDKGLVNPSKEKIKETTADLIRHGPISETNVY 40
>gi|167593921|gb|ABZ85647.1| At3g03660-like protein [Arabidopsis lyrata]
Length = 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF G P K++ I L + G + + NV+ WFQNRR
Sbjct: 21 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRR 77
>gi|297833040|ref|XP_002884402.1| hypothetical protein ARALYDRAFT_477611 [Arabidopsis lyrata subsp.
lyrata]
gi|297330242|gb|EFH60661.1| hypothetical protein ARALYDRAFT_477611 [Arabidopsis lyrata subsp.
lyrata]
Length = 268
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF G P K++ I L + G + + NV+ WFQNRR
Sbjct: 30 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRR 86
>gi|167593897|gb|ABZ85635.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RW+P P Q+ ILESIF G P K++ I L + G + + NV+ WFQNRR
Sbjct: 21 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRR 77
>gi|449501922|ref|XP_004161495.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 11-like
[Cucumis sativus]
Length = 257
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R RWTP P Q+ ILESIF+ G P K + I L + G + + N + WFQNRR+RS
Sbjct: 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANXFYWFQNRRSRS 80
Query: 164 KRKQLVSSSANTLHNGGGGGAGAGAG 189
+R+Q +A T H G G G
Sbjct: 81 RRRQRQLQAAAT-HQGSTGAIHYDCG 105
>gi|6091768|gb|AAF03478.1|AC009327_17 hypothetical protein [Arabidopsis thaliana]
Length = 199
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P SG R RW+P P Q+ ILESIF G P K++ I L + G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 152 VYNWFQNRR 160
V+ WFQNRR
Sbjct: 78 VFYWFQNRR 86
>gi|15237356|ref|NP_199413.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
gi|9757721|dbj|BAB08246.1| unnamed protein product [Arabidopsis thaliana]
gi|332007943|gb|AED95326.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
Length = 122
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG-QISETNVYNWFQNRRARS 163
+ W P Q QILE +F GT PS IK+IT++L +G ++ + +VY WF NR+ S
Sbjct: 52 KPEWKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKY-S 110
Query: 164 KRKQLVS 170
++ +LVS
Sbjct: 111 RKPKLVS 117
>gi|422898309|dbj|BAM67023.1| protein WUSCHEL-like [Silene dioica]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 107 RWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 25 RWTPTTEQIKLLKELYYINGVRSPTADQIQAICSRLRRYGKIEGKNVFYWFQNHKARERQ 84
Query: 166 KQLVS 170
K+ ++
Sbjct: 85 KKRLT 89
>gi|422898315|dbj|BAM67026.1| protein WUSCHEL-like [Silene vulgaris]
Length = 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 107 RWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 33 RWTPTTEQIKLLKELYYTNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 92
Query: 166 KQ 167
K+
Sbjct: 93 KK 94
>gi|422898305|dbj|BAM67021.1| protein WUSCHEL-like [Silene diclinis]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 107 RWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 25 RWTPTTEQIKLLKELYYINGVRSPTADQIQAICSRLRRYGKIEGKNVFYWFQNHKARERQ 84
Query: 166 KQLVS 170
K+ ++
Sbjct: 85 KKRLT 89
>gi|229359307|emb|CAT02912.1| putative wuschel homeobox protein WOX2 [Acorus calamus]
Length = 54
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
W PT Q+ +LE ++ QG TP+ ++I++IT L +G I NV+ WFQN +A
Sbjct: 1 WNPTKEQINLLEGLYRQGVRTPTAEQIQQITCRLRSYGPIEGKNVFYWFQNHKA 54
>gi|422898300|dbj|BAM67019.1| hypothetical protein [Silene latifolia]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 107 RWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q+++L+ ++ G +P+ +I+ I L ++G+I NV+ WFQN +AR ++
Sbjct: 25 RWTPTTEQIKLLKELYYINGVRSPTADQIQAICSRLRRYGKIEGKNVFYWFQNHKARERQ 84
Query: 166 KQLVS 170
K+ ++
Sbjct: 85 KKRLT 89
>gi|229359293|emb|CAT02905.1| putative wuschel homeobox protein WOX4 [Ginkgo biloba]
Length = 54
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
W+P P Q+ ILE + G TP+ ++I+ IT +L +G+I NV+ WFQN +A
Sbjct: 1 WSPKPEQITILEMFYKGGMRTPNAEQIEHITAQLRHYGKIEGKNVFYWFQNHKA 54
>gi|224173355|ref|XP_002339759.1| predicted protein [Populus trichocarpa]
gi|222832180|gb|EEE70657.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 107 RWTPTPVQLQILESIFD-QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
RWTPT Q++IL+ ++ +G +P+ +I++I+ L ++G+I NV+ WFQN +AR ++
Sbjct: 1 RWTPTTDQIRILKELYYIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARERQ 60
Query: 166 KQLVSS 171
K+ +++
Sbjct: 61 KKRLTN 66
>gi|359802461|emb|CBX45508.1| hypothetical protein [Ceratopteris richardii]
Length = 591
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQG-TGTPSKQKIKEITVELSQHGQISETNV 152
M S G+ RW+PT QL+ L +I+ G TP+ +I IT L +G+I NV
Sbjct: 63 MWSLYGYNAPRGTRWSPTTEQLRELLNIYHIGGIRTPTTAQISSITARLRHYGRIEGRNV 122
Query: 153 YNWFQNRRARSKRKQL 168
+ WFQ+++AR ++++L
Sbjct: 123 FYWFQDQKARERKRRL 138
>gi|116811096|emb|CAJ84170.1| WOX2B protein [Zea mays]
Length = 69
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ----ISETNVYNWFQN 158
+A RW PT Q+ +LE +++ G +PS ++I++I L +HG I +V+ WFQN
Sbjct: 1 AAAARWNPTKEQVAVLEGLYEHGLRSPSAEQIQQIADRLREHGHGHGAIEGKSVFYWFQN 60
Query: 159 RRARSKRKQ 167
RAR ++++
Sbjct: 61 HRARLRQQR 69
>gi|229359337|emb|CAT02927.1| putative wuschel homeobox protein WOX9B [Gnetum gnemon]
Length = 52
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
W+P P Q++ILE +F+ G PS+ +IK I L +G + + NV+ WFQN
Sbjct: 1 WSPKPEQIRILEDLFNSGMVNPSRDEIKRIKNRLLPYGNVGDANVFYWFQN 51
>gi|413934301|gb|AFW68852.1| hypothetical protein ZEAMMB73_147054 [Zea mays]
Length = 347
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 28/34 (82%)
Query: 48 LETLRKQIAVYATICEQLVEMHKSLSAHQDLAAA 81
+E LRKQI++YATICEQLVEMH+ L+ HQD A
Sbjct: 1 MEVLRKQISIYATICEQLVEMHRILTEHQDTIAV 34
>gi|229359323|emb|CAT02920.1| putative wuschel homeobox protein WOX3 [Amborella trichopoda]
Length = 54
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
W PT QL ILE ++ G TP+ +I+ IT LS +G+I NV+ WFQN +A
Sbjct: 1 WNPTVEQLMILEEMYRGGIRTPNALQIQHITTHLSYYGKIEGKNVFYWFQNHKA 54
>gi|229359335|emb|CAT02926.1| putative wuschel homeobox protein WOX9A [Gnetum gnemon]
Length = 52
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW P P Q++ILE +F+ G PS+ +IK I L +G + + NV+ WFQ
Sbjct: 2 RWNPRPEQIRILEDLFNSGMVNPSRDEIKRIKNRLLPYGNVGDANVFYWFQ 52
>gi|413951982|gb|AFW84631.1| putative homeobox DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 159
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ----ISETNVYNWFQNRRAR 162
RW PT Q+ +LE +++ G +PS ++I++I L +HG I +V+ WFQN RAR
Sbjct: 34 RWNPTKEQVAVLEGLYEHGLRSPSAEQIQQIADRLREHGHGHGAIEGKSVFYWFQNHRAR 93
Query: 163 SKRKQ 167
++++
Sbjct: 94 LRQQR 98
>gi|414866554|tpg|DAA45111.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 314
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
AR RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 34 ARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 90
>gi|229359331|emb|CAT02924.1| putative wuschel homeobox protein WOX1 [Amborella trichopoda]
Length = 53
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
RW PTP QL+ LE ++ +GT TP+ +I+ IT +L ++G+I NV+ WF
Sbjct: 4 RWNPTPEQLRTLEEMYRRGTRTPTADQIQYITGQLRRYGKIEGKNVFYWF 53
>gi|124360469|gb|ABN08479.1| Homeodomain-related [Medicago truncatula]
Length = 325
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K++ +I L + G + + NV+ WFQNRR
Sbjct: 25 VRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRR 81
>gi|229359311|emb|CAT02914.1| putative wuschel homeobox protein WOX5 [Acorus calamus]
Length = 50
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
W PT Q++ L +F G TPS +I+ I+ ELS +G I NVYNWFQ
Sbjct: 1 WNPTVEQVRFLTDLFRSGLRTPSTDQIQRISSELSFYGHIESKNVYNWFQ 50
>gi|357508903|ref|XP_003624740.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|217074296|gb|ACJ85508.1| unknown [Medicago truncatula]
gi|355499755|gb|AES80958.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 272
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K++ +I L + G + + NV+ WFQNRR
Sbjct: 25 VRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRR 81
>gi|388510020|gb|AFK43076.1| unknown [Medicago truncatula]
Length = 272
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K++ +I L + G + + NV+ WFQNRR
Sbjct: 25 VRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRR 81
>gi|229359321|emb|CAT02919.1| putative wuschel homeobox protein WOX2 [Amborella trichopoda]
Length = 54
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW PT Q+++LE ++ QG TP+ ++I++IT L +G I NV+ WFQ
Sbjct: 4 RWNPTKEQIEVLEGLYRQGIRTPTAEQIQQITRRLRVYGHIEGKNVFYWFQ 54
>gi|302765032|ref|XP_002965937.1| hypothetical protein SELMODRAFT_84885 [Selaginella moellendorffii]
gi|300166751|gb|EFJ33357.1| hypothetical protein SELMODRAFT_84885 [Selaginella moellendorffii]
Length = 192
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQH--GQISETNVYNWFQNRRARS 163
+RW P QL +LE ++ +GT PS++ I EI V+L H G +SE+ VY WFQN++AR
Sbjct: 73 ERWLPNREQLAVLEDLYSKGT-MPSQENIAEI-VDLVDHDHGPVSESKVYFWFQNKKARE 130
Query: 164 KRKQLVSSSANT 175
+R++ AN
Sbjct: 131 RRQRRRIEEANA 142
>gi|357112415|ref|XP_003558004.1| PREDICTED: WUSCHEL-related homeobox 6-like [Brachypodium
distachyon]
Length = 326
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 35 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 90
>gi|229359303|emb|CAT02910.1| putative wuschel homeobox protein WOX11 [Acorus calamus]
gi|229359305|emb|CAT02911.1| putative wuschel homeobox protein WOX9 [Acorus calamus]
Length = 54
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
W P P Q+ ILESIF+ G P K + I L + G + + NV+ WFQN +A
Sbjct: 1 WNPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNHKA 54
>gi|242035881|ref|XP_002465335.1| hypothetical protein SORBIDRAFT_01g036670 [Sorghum bicolor]
gi|241919189|gb|EER92333.1| hypothetical protein SORBIDRAFT_01g036670 [Sorghum bicolor]
Length = 323
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
R RWTP P Q+ ILESIF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 35 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRR 91
>gi|229359327|emb|CAT02922.1| putative wuschel homeobox protein WOX4 [Amborella trichopoda]
Length = 54
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW PT Q+ ILE ++ G TP+ Q+I+ IT +L ++G+I NV+ WFQ
Sbjct: 4 RWNPTQEQIAILEMLYRGGMRTPNAQQIEHITAQLGRYGKIEGKNVFYWFQ 54
>gi|229359315|emb|CAT02916.1| putative wuschel homeobox protein WUS [Acorus calamus]
Length = 55
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 108 WTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
WTPT Q++IL ++ + G +PS ++I+ I+ L Q+G+I NV+ WFQN +A
Sbjct: 1 WTPTTEQIRILRDLYYNGGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKA 55
>gi|302795714|ref|XP_002979620.1| hypothetical protein SELMODRAFT_419270 [Selaginella moellendorffii]
gi|300152868|gb|EFJ19509.1| hypothetical protein SELMODRAFT_419270 [Selaginella moellendorffii]
Length = 268
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+QRW P QL ILE + +GT PS++ + EI + HG + E+ VY WFQN++
Sbjct: 63 QQRWRPNSQQLAILEEFYAKGT-PPSQENVTEIAELIGHHGPVDESKVYYWFQNKK 117
>gi|229359329|emb|CAT02923.1| putative wuschel homeobox protein WUS [Amborella trichopoda]
Length = 55
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 108 WTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
WTPT Q++IL ++ G +P+ ++I+ I+ L Q+G+I NV+ WFQN +A
Sbjct: 1 WTPTTEQIRILRELYYSNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKA 55
>gi|357520305|ref|XP_003630441.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355524463|gb|AET04917.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 165
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 118 LESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+E ++ +GT TPS ++I++IT +L + G+I NV+ WFQN +AR ++K+
Sbjct: 93 VEELYRRGTRTPSAEQIQQITAQLRKIGKIEGKNVFYWFQNHKARERQKR 142
>gi|413942155|gb|AFW74804.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 117 ILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +AR ++K
Sbjct: 2 ILEDMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKARDRQK 51
>gi|380848546|emb|CBX45509.1| hypothetical protein [Cyathea australis]
Length = 310
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQG-TGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
++ A RW+PT QL+ L+++F +G TP+ +I I L HG+I NV+ W QN
Sbjct: 56 YRAPAGTRWSPTTEQLRELQALFHEGGMRTPTTAQISRIAARLRAHGRIEGRNVFYWSQN 115
Query: 159 RRA 161
++A
Sbjct: 116 QKA 118
>gi|302769888|ref|XP_002968363.1| hypothetical protein SELMODRAFT_451353 [Selaginella moellendorffii]
gi|300164007|gb|EFJ30617.1| hypothetical protein SELMODRAFT_451353 [Selaginella moellendorffii]
Length = 253
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKE-ITVELSQHGQISETNVYNWFQNRRARSK 164
+RW P QL +LE ++ +GT PS++ I E +++ HG +SE+ VY WFQN++AR +
Sbjct: 64 ERWLPNREQLAVLEDLYSKGT-MPSQENIAEAVSLVGHDHGPVSESKVYFWFQNKKARER 122
Query: 165 RKQLVSSSAN 174
R++ AN
Sbjct: 123 RQRRRIEEAN 132
>gi|302791776|ref|XP_002977654.1| hypothetical protein SELMODRAFT_417553 [Selaginella moellendorffii]
gi|300154357|gb|EFJ20992.1| hypothetical protein SELMODRAFT_417553 [Selaginella moellendorffii]
Length = 268
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+QRW P QL ILE + +GT PS++ + EI + HG + E+ VY WFQN++
Sbjct: 63 QQRWRPNSQQLGILEEFYAKGT-PPSQENVTEIAELIGHHGPVDESKVYYWFQNKK 117
>gi|229359341|emb|CAT02929.1| putative wuschel homeobox protein WOX2 [Gnetum gnemon]
Length = 50
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 110 PTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
PT QL+ILE++++ G +P ++I+ IT EL +HG ++ NV+ WFQ
Sbjct: 3 PTKEQLRILENVYNGGNKSPRTEQIQHITAELRRHGNVAGINVFYWFQ 50
>gi|229359325|emb|CAT02921.1| putative wuschel homeobox protein WOX5 [Amborella trichopoda]
Length = 54
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
RW PT Q+++L +F G TPS ++I+ I+ L G++ NV+ WFQ
Sbjct: 4 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLGAFGKVESKNVFYWFQ 54
>gi|229359297|emb|CAT02907.1| putative wuschel homeobox protein WOX11 [Ginkgo biloba]
Length = 50
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 108 WTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
W+P P Q+ ILESIF+ G P K + I L + G + + NV+ WFQ
Sbjct: 1 WSPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQ 50
>gi|336364783|gb|EGN93137.1| hypothetical protein SERLA73DRAFT_78979 [Serpula lacrymans var.
lacrymans S7.3]
Length = 363
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +F Q T PSKQK K++ EL+ + + V WFQNRR +K
Sbjct: 58 RSRHRMTSEQLVFLEDVFKQDTH-PSKQKKKDVAGELNMNFK----TVTIWFQNRRQITK 112
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSE 194
+ Q VS+SA + G A + A D+E
Sbjct: 113 KNQAVSASATPV---SGSPAASTANEEDAE 139
>gi|449267690|gb|EMC78603.1| Homeobox protein Nkx-3.1, partial [Columba livia]
Length = 211
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT--VELSQHGQI 147
CDP + K + R R + Q+ LE F S+QK L++H Q+
Sbjct: 90 CDPPRAAQCPPKAAKRSRAAFSHTQVLELERKF-------SRQKYLSAPERARLAKHLQL 142
Query: 148 SETNVYNWFQNRRARSKRKQLVSSSANTLHNGGG 181
+ET V WFQNRR ++KRKQ+ S S T + G
Sbjct: 143 TETQVKIWFQNRRYKTKRKQIASESGGTDTDAAG 176
>gi|380848562|emb|CBX45517.1| hypothetical protein, partial [Ophioglossum lusitanicum]
Length = 40
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
QLQIL+ +F + P+KQ++K I ELSQ+GQISE NVY
Sbjct: 1 QLQILDDLFARRNCFPNKQEVKHIAAELSQYGQISEANVY 40
>gi|26452030|dbj|BAC43105.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|28950873|gb|AAO63360.1| At2g33880 [Arabidopsis thaliana]
Length = 305
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 129 PSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK K
Sbjct: 4 PPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 41
>gi|33641772|gb|AAQ24371.1| BarX/Bsh [Halichondria bowerbanki]
Length = 253
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETE 198
+EL+ ++SET V WFQNRR + K++Q++ + + L G G +DSE ++E
Sbjct: 178 MELANRLELSETQVKTWFQNRRMKCKKQQVLETDQDELATGPPGKKSKSE--SDSETDSE 235
Query: 199 VDSLL 203
+D L
Sbjct: 236 LDDSL 240
>gi|14588545|dbj|BAB61733.1| transcription factor ems/emx [Halocynthia roretzi]
Length = 591
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 79 AAAGGRLGN-IYCDPLMTSGGG-------HKISARQRWTPTPVQLQILESIFDQG---TG 127
AAA GR N + DPL+ + G + R R TP QL LE FD+ G
Sbjct: 384 AAAMGRPINPTFADPLLRARFGFLMPNPFQRKPKRIRTAFTPAQLLRLEHEFDKNHYVVG 443
Query: 128 TPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNG 179
KQ L+ +++ET V WFQNRR + KR+++ +A NG
Sbjct: 444 AERKQ--------LASSLKLTETQVKVWFQNRRTKYKRQKIEEKAAGRKQNG 487
>gi|303290320|ref|XP_003064447.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454045|gb|EEH51352.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 599
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
RW TP Q L+ +F+ P +++ EIT EL G I E NV+ WF N
Sbjct: 511 RWRATPEQRARLDELFETDDAVPKEERKSEITRELRAFGPIEERNVHFWFAN 562
>gi|449510396|ref|XP_004163652.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 178
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQI 147
RW PT Q+ ILE+++ QG TPS +I++ITV L +G I
Sbjct: 22 RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHI 62
>gi|115696899|ref|XP_001177748.1| PREDICTED: uncharacterized protein LOC753166 [Strongylocentrotus
purpuratus]
Length = 237
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QLQILE+ F+ Q TG ++ +L+ +I E V WFQNRRAR +R L
Sbjct: 29 TELQLQILETAFNDNQYTGITTRD-------QLASSLKIGEDRVLVWFQNRRARFRRASL 81
Query: 169 VSSSAN 174
VSS A+
Sbjct: 82 VSSFAH 87
>gi|339259158|ref|XP_003369765.1| homeobox protein SMOX-3 [Trichinella spiralis]
gi|316965991|gb|EFV50627.1| homeobox protein SMOX-3 [Trichinella spiralis]
Length = 395
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 85 LGNIYCDPLMTSGGGHKISARQR---WTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
+GN + ++TSGGG + +QR T T QL+ LE F Q T P +EI ++
Sbjct: 273 IGNKFASTMITSGGGQQDRRKQRRIRTTFTSSQLKELEKAF-QATHYPDIYTREEIAFKI 331
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 332 ----DLTEARVQVWFQNRRAKFRKQE 353
>gi|110763992|ref|XP_001120101.1| PREDICTED: homeobox protein OTX-like [Apis mellifera]
Length = 369
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
++ GG K + R R T VQL LE F T +K + +EL+ ++E +
Sbjct: 90 ISQGGNQKKTKRSRTAYTSVQLVELEKEF-----TVTKYLCRPRRIELAIALSLTERQIK 144
Query: 154 NWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGG 190
WFQNRR + K++Q + N+L G +G AGG
Sbjct: 145 IWFQNRRMKYKKEQQQTRQNNSLQR-NGEASGQNAGG 180
>gi|222630003|gb|EEE62135.1| hypothetical protein OsJ_16922 [Oryza sativa Japonica Group]
Length = 246
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 121 IFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
++ G TP+ +I++IT LS +G+I NV+ WFQN +AR ++K
Sbjct: 1 MYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 46
>gi|414588561|tpg|DAA39132.1| TPA: narrow sheath1 [Zea mays]
Length = 246
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 117 ILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
ILE ++ G TP+ +I++IT L+ +G+I NV+ WFQN +
Sbjct: 2 ILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 45
>gi|110270465|gb|ABG57071.1| paired class homeodomain repressor [Lytechinus variegatus]
Length = 232
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QL+ILE++F+ + +IT +L+ Q+ E + WFQNRRAR +R L
Sbjct: 29 TDLQLRILETVFNDN-------QYPDITTREQLASSLQLKEDRIMVWFQNRRARVRRASL 81
Query: 169 VSSSAN 174
VS SA+
Sbjct: 82 VSCSAH 87
>gi|410926445|ref|XP_003976689.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 190
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 89 YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
YC + + + AR R T QL+ LE++FD P+ E ++++H +S
Sbjct: 93 YCPAGVPAQAQLRQRARVRTVFTDAQLRQLEALFDLTDYPPA-----EARAQVAKHSGLS 147
Query: 149 ETNVYNWFQNRRARSK--RKQLVSSSANTLHNGGGGGAGA 186
E V WF+NRRAR K R V SS++ A A
Sbjct: 148 EETVRVWFKNRRARRKQQRSAKVKSSSSPCQRSADTKAAA 187
>gi|291409907|ref|XP_002721242.1| PREDICTED: short stature homeobox-like [Oryctolagus cuniculus]
Length = 392
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 72 LSAHQDLAAAGGRLGNIYCDPLMTS------------GGGHKISARQRWTPTPV---QLQ 116
+SA D A R I C P ++S GGG RQR + T QL+
Sbjct: 177 VSASSDEIATKSRSQRIRCKPSVSSDAGTKASLSSEDGGGGGARLRQRRSRTNFSAEQLR 236
Query: 117 ILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTL 176
LE +F++ T P + ELSQ +SE V WFQNRRA+ ++++ N +
Sbjct: 237 ALERLFEE-THYPDA----FMREELSQRLGLSEARVQVWFQNRRAKCRKQE------NQM 285
Query: 177 HNG 179
H G
Sbjct: 286 HKG 288
>gi|303283242|ref|XP_003060912.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457263|gb|EEH54562.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 558
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ W PT QL+ L +F G PS++ I I ++S G+ ++ NV WF +R
Sbjct: 502 EEWEPTAAQLERLNELFKAGVQNPSERAIARIANQISTFGKCTDDNVERWFAVKR 556
>gi|380848552|emb|CBX45512.1| hypothetical protein, partial [Equisetum giganteum]
Length = 40
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q++ILESIF+ GT TPS++ I EI L + G + E NV+
Sbjct: 1 QIEILESIFEAGTVTPSRKLIVEIATHLRRFGNVGEANVF 40
>gi|380848550|emb|CBX45511.1| hypothetical protein, partial [Cyathea australis]
Length = 40
Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q+Q+LE++F+ GT TPS+ I EI L Q G I E NV+
Sbjct: 1 QIQVLEALFNSGTTTPSRDMIVEIAACLKQFGSIMEANVF 40
>gi|380848558|emb|CBX45515.1| hypothetical protein, partial [Psilotum nudum]
Length = 40
Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q+Q+LES+F+ GT TPS++ I I L Q G I+E NV+
Sbjct: 1 QIQLLESVFNSGTTTPSREMIVGIAARLRQFGNIAEANVF 40
>gi|195480036|ref|XP_002101113.1| GE17435 [Drosophila yakuba]
gi|194188637|gb|EDX02221.1| GE17435 [Drosophila yakuba]
Length = 264
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---R 165
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ + R
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQAR 84
Query: 166 KQLVS--------SSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
QL+ S GGG GA GA + ++ PENLS
Sbjct: 85 LQLLQDAWRMRCLSLGTPPVMGGGAVQGASGNGAPARPPSQT-------------PENLS 131
Query: 218 SAHSTSQPQHLRNLP 232
SA S+ + N P
Sbjct: 132 SASKDSELAEVSNGP 146
>gi|302791982|ref|XP_002977757.1| hypothetical protein SELMODRAFT_451015 [Selaginella moellendorffii]
gi|300154460|gb|EFJ21095.1| hypothetical protein SELMODRAFT_451015 [Selaginella moellendorffii]
Length = 152
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
A+ RW P QL ILE + QGT T S++ I IT L G VY+WFQN
Sbjct: 35 AQPRWRPNEEQLAILEDFYKQGTPT-SQENIDTITELLRHRGPAELNKVYSWFQN 88
>gi|302757936|ref|XP_002962391.1| hypothetical protein SELMODRAFT_451352 [Selaginella moellendorffii]
gi|300169252|gb|EFJ35854.1| hypothetical protein SELMODRAFT_451352 [Selaginella moellendorffii]
Length = 220
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
RQRW P QLQILE + T PS EIT + ++G + +NVY WF N+
Sbjct: 70 VRQRWEPNSDQLQILEEFYANST-PPSP----EITDLVGRYGAVDHSNVYYWFTNK 120
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R R T T +QL LE F+ + + +I EL+Q +++E + WF NRRAR
Sbjct: 195 RSRTTFTALQLDELEKAFE-------RTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 247
Query: 163 SKRKQLVSSSANTLHNGGGGGAGAGAGGADS 193
RKQ+ S++ ++ GG G G G + S
Sbjct: 248 -LRKQMSSNTGSSTPGSGGYGMGLALGYSPS 277
>gi|24659086|ref|NP_611756.1| CG9876 [Drosophila melanogaster]
gi|21626590|gb|AAF46956.2| CG9876 [Drosophila melanogaster]
gi|94400579|gb|ABF17914.1| FI01017p [Drosophila melanogaster]
Length = 275
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 79 AAAGGRLGNIYCDPLMTSGGGH--KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
A GG C + +GGGH + R R T + QL LE +F++ T P +E
Sbjct: 91 AGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREE 149
Query: 137 ITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+ ++ +SE V WFQNRRA+ +R +
Sbjct: 150 LATKV----HLSEARVQVWFQNRRAKFRRNE 176
>gi|33589354|gb|AAQ22444.1| RE60081p [Drosophila melanogaster]
Length = 275
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 79 AAAGGRLGNIYCDPLMTSGGGH--KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
A GG C + +GGGH + R R T + QL LE +F++ T P +E
Sbjct: 91 AGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREE 149
Query: 137 ITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+ ++ +SE V WFQNRRA+ +R +
Sbjct: 150 LATKV----HLSEARVQVWFQNRRAKFRRNE 176
>gi|334322111|ref|XP_001376930.2| PREDICTED: hypothetical protein LOC100026252 [Monodelphis
domestica]
Length = 353
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE--LSQHGQISETNVY 153
SG G R+R + +P QLQ+LE +F + +IT+ L+ ++ E+ +
Sbjct: 200 SGSGSGSQRRKRTSFSPEQLQLLELVFR-------RTMYPDITLRERLATLTRLPESRIQ 252
Query: 154 NWFQNRRARSKRKQ 167
WFQNRRA+S+R++
Sbjct: 253 VWFQNRRAKSRRQR 266
>gi|195585928|ref|XP_002082730.1| GD25082 [Drosophila simulans]
gi|194194739|gb|EDX08315.1| GD25082 [Drosophila simulans]
Length = 275
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 90 CDPLMTSGGGH--KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQI 147
C + +GGGH + R R T + QL LE +F++ T P ++E EL+ +
Sbjct: 102 CSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFER-THYPDA-FVRE---ELATKVHL 156
Query: 148 SETNVYNWFQNRRARSKRKQ 167
SE V WFQNRRA+ +R +
Sbjct: 157 SEARVQVWFQNRRAKFRRNE 176
>gi|41055202|ref|NP_957490.1| short stature homeobox protein 2 [Danio rerio]
gi|33604130|gb|AAH56324.1| Short stature homeobox 2 [Danio rerio]
gi|40807143|gb|AAH65345.1| Short stature homeobox 2 [Danio rerio]
Length = 299
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C PL R R T QL LE +FD+ T P + ELSQ +SE
Sbjct: 95 CKPLEDETQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSE 149
Query: 150 TNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
V WFQNRRA+ ++++ N LH G GA +
Sbjct: 150 ARVQVWFQNRRAKCRKQE------NQLHKGVLIGAAS 180
>gi|195346972|ref|XP_002040028.1| GM15584 [Drosophila sechellia]
gi|194135377|gb|EDW56893.1| GM15584 [Drosophila sechellia]
Length = 273
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 90 CDPLMTSGGGH--KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQI 147
C + +GGGH + R R T + QL LE +F++ T P + EL+ +
Sbjct: 102 CSGNLPAGGGHHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAF----VREELATKVHL 156
Query: 148 SETNVYNWFQNRRARSKRKQ 167
SE V WFQNRRA+ +R +
Sbjct: 157 SEARVQVWFQNRRAKFRRNE 176
>gi|429962148|gb|ELA41692.1| hypothetical protein VICG_01325 [Vittaforma corneae ATCC 50505]
Length = 213
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Query: 96 SGGGHKI-----SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
+G G+ + S + R +P QL+ILES+ + T P+K E+ + L++ ++E
Sbjct: 78 NGAGYDVQRANNSVKTRSRTSPRQLEILESVC-RTTLKPNK----ELRIRLARELNMTER 132
Query: 151 NVYNWFQNRRARSKR 165
V WFQN+RA+SK+
Sbjct: 133 QVQIWFQNKRAKSKK 147
>gi|82621557|gb|ABB86450.1| EMXb-ANTP class homeobox protein, partial [Nematostella vectensis]
gi|110339069|gb|ABG67798.1| EMXA, partial [Nematostella vectensis]
Length = 60
Score = 43.9 bits (102), Expect = 0.082, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 105 RQRWTPTPVQLQILESIFDQG---TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
R R TP QL LE+ FD+ GT KQ L+ + ++SET V WFQNRR
Sbjct: 3 RVRTAFTPFQLLCLETSFDKNHYVVGTERKQ--------LASYLKLSETQVKVWFQNRRT 54
Query: 162 RSKRK 166
+ KR+
Sbjct: 55 KWKRQ 59
>gi|281204744|gb|EFA78939.1| putative homeobox transcription factor [Polysphondylium pallidum
PN500]
Length = 502
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 37 VMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTS 96
+M +K+ + V Q V ++ S+S DL +G + + +PL S
Sbjct: 122 IMNLKLTDSSNVVPFESTSNVIGEDSRQSVSLNNSIS---DLRTSGSGIPPV-INPLSQS 177
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
++R +P QL ILE IF+ K ++I + L+ +S V WF
Sbjct: 178 LQSTSAYKKKRQRTSPEQLAILEQIFETD-----KMPSQQIRIRLANQLGMSSRRVQIWF 232
Query: 157 QNRRARSKR 165
QN+RA+ KR
Sbjct: 233 QNKRAKVKR 241
>gi|170575496|ref|XP_001893267.1| Homeobox domain containing protein [Brugia malayi]
gi|158600833|gb|EDP37899.1| Homeobox domain containing protein [Brugia malayi]
Length = 273
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 74 AHQDLAAAGGRLGNIYCDPLMTSG-------GGHKISARQRWTPTPVQLQILESIFDQGT 126
AH L G +GN D T+G + R+R T + +QL++LE+ F
Sbjct: 51 AHNFLPGGMGYIGNSLAD-CQTAGLTAWNASQAARKQRRERTTFSRIQLEVLENYF---- 105
Query: 127 GTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLH------N 178
SK + +I + E+S Q+ E+ V WF+NRRA++++++ + LH N
Sbjct: 106 ---SKTRYPDIFIREEISLKIQLPESRVQVWFKNRRAKARQQKKATKHEVALHVVPACSN 162
Query: 179 GGGGGAGA------GAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHLRNLP 232
G + A +E++TE + E +T+ E SS + P + +
Sbjct: 163 DGSSSSKTNSADIRNASTCSTEIKTERSETSV-SEQRTSPIEIDSSKLTVLPPPYFGTIS 221
Query: 233 PT 234
P+
Sbjct: 222 PS 223
>gi|402911273|ref|XP_003918261.1| PREDICTED: rhox homeobox family member 1 [Papio anubis]
Length = 185
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP+Q+Q LES+F Q P+++ EL+++ ++E V WF+N+RAR KR Q
Sbjct: 110 TPLQVQELESVFQRTQYPDVPTRR-------ELAENLGVTEDKVRVWFKNKRARCKRYQR 162
Query: 169 VSSSANTL 176
AN L
Sbjct: 163 ELMLANEL 170
>gi|326527745|dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 75 HQDLAAAGGRLGNI---------YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQG 125
+DLA GGR G + +P GG I ++R++ Q++ LES+F
Sbjct: 30 RRDLAREGGREGGMEQGEEDGDWMMEPASGKKGGVMIDRKKRFSEE--QIKSLESMFATQ 87
Query: 126 TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QK+ +L++ + V WFQN+RAR K KQL
Sbjct: 88 TKLEPRQKL-----QLARELGLQPRQVAIWFQNKRARWKSKQL 125
>gi|326516528|dbj|BAJ92419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 289
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 75 HQDLAAAGGRLGNI---------YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQG 125
+DLA GGR G + +P GG I ++R++ Q++ LES+F
Sbjct: 27 RRDLAREGGREGGMEQGEEDGDWMMEPASGKKGGVMIDRKKRFSEE--QIKSLESMFATQ 84
Query: 126 TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QK+ +L++ + V WFQN+RAR K KQL
Sbjct: 85 TKLEPRQKL-----QLARELGLQPRQVAIWFQNKRARWKSKQL 122
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ +++S + E V WFQNRRA+ +
Sbjct: 38 RNRTTFTTYQLHELERAFER-SHYPDVYSREELAMKVS----LPEVRVQVWFQNRRAKWR 92
Query: 165 RKQLVSSSANTLHNG 179
R++ + SS++TLH+
Sbjct: 93 RQEKLESSSSTLHDS 107
>gi|348506430|ref|XP_003440762.1| PREDICTED: homeobox-containing protein 1-like [Oreochromis
niloticus]
Length = 461
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT-----------VE 140
PL T+ G ++ R+T L ++ES F+ P + K +EI +
Sbjct: 287 PLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQ-YPDEAKREEIANACNAVIQKPGKK 345
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQ----LVSSSANTLHNGGGGGAGAGAGGADSEVE 196
LS +++ VYNWF NRR KR+ ++ S + + GG G D +
Sbjct: 346 LSDLERVTSLKVYNWFANRRKEIKRRANIATILESHGIDVQSPGGHSNSDDIDGNDFSEQ 405
Query: 197 TEVDSLLLHDEHKTTKPENLSSAHSTSQ 224
E DS L D+ S+AHS Q
Sbjct: 406 VERDSSLSQDD---------SAAHSEHQ 424
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ +++S + E V WFQNRRA+ +
Sbjct: 38 RNRTTFTTYQLHELERAFER-SHYPDVYSREELAMKVS----LPEVRVQVWFQNRRAKWR 92
Query: 165 RKQLVSSSANTLHNG 179
R++ + SS++TLH+
Sbjct: 93 RQEKLESSSSTLHDS 107
>gi|330844803|ref|XP_003294302.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
gi|325075256|gb|EGC29167.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
Length = 486
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 77 DLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKE 136
DL+A+ G L G + ++R +P QL ILE IF+ PS+Q
Sbjct: 190 DLSASTGDLA-----------GSLSSNKKKRQRTSPEQLAILEQIFETD-KMPSQQ---- 233
Query: 137 ITVELSQHGQISETNVYNWFQNRRARSKR 165
I V L+ +S V WFQN+RA+ KR
Sbjct: 234 IRVRLANQLGMSSRRVQIWFQNKRAKVKR 262
>gi|154147646|ref|NP_001093694.1| short stature homeobox 2 [Xenopus (Silurana) tropicalis]
gi|110559940|gb|ABG76208.1| Shox2 [Xenopus (Silurana) tropicalis]
Length = 311
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 98 GGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G KI R+ R T QL LE +FD+ T P + ELSQ +SE V WF
Sbjct: 114 GQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWF 168
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
QNRRA+ ++++ N LH G GAG+
Sbjct: 169 QNRRAKCRKQE------NQLHKGVLIGAGS 192
>gi|324521338|gb|ADY47835.1| Homeobox protein OTX1 [Ascaris suum]
Length = 279
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 74 AHQDLAAAGGRLGNIYCD------PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTG 127
AH L A G +G D +G + R+R T T +QL++LE F
Sbjct: 54 AHNFLPAGMGYIGGSLADCQSAGMAAWNAGQVSRKQRRERTTFTRIQLEVLEGYF----- 108
Query: 128 TPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
SK + +I + E+S Q+ E+ V WF+NRRA++++++ S
Sbjct: 109 --SKTRYPDIFIREEISLKIQLPESRVQVWFKNRRAKARQQKKAS 151
>gi|358254520|dbj|GAA55672.1| homeotic protein proboscipedia [Clonorchis sinensis]
Length = 330
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
Query: 101 KISARQRWTPTPVQLQILESIF--DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
K++ R R T QL LE F Q P + +E++ ++SE + WFQN
Sbjct: 35 KLAKRARTAYTQTQLMELEKEFWYSQYLCRPRR-------IEIASSLRLSEKQIKVWFQN 87
Query: 159 RRARSKRKQLVSSSANTL-HNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLS 217
RR + KR++ + + N + G + S + +D L EH+T + N
Sbjct: 88 RRMKFKRQKQIGACDNPVGEYKAFPGPSEESRLPSSCHHSHIDLLGHSHEHRTYEKMNCF 147
Query: 218 SAHST--SQPQHLRNLPPTP 235
H T QP NL P P
Sbjct: 148 VNHKTQYQQPDQQHNLAPGP 167
>gi|328788511|ref|XP_001120111.2| PREDICTED: short stature homeobox protein 2-like [Apis mellifera]
Length = 376
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
SG G+ R R T QL LE +FD+ T P + ELSQ +SE V W
Sbjct: 181 SGNGNGKQRRSRTNFTLEQLAELERLFDE-THYPDAF----MREELSQRLGLSEARVQVW 235
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGG 183
FQNRRA+ ++ + + LH G GG
Sbjct: 236 FQNRRAKCRKHE------SQLHKGVAGG 257
>gi|390345672|ref|XP_003726384.1| PREDICTED: homeobox protein unc-4-like [Strongylocentrotus
purpuratus]
Length = 237
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QLQILE+ F+ Q G +++ +L+ ++ E + WFQNRR R +R L
Sbjct: 29 TELQLQILETAFNDNQYPGITARE-------QLASSLKLGEDRILAWFQNRRTRLRRASL 81
Query: 169 VSSSA 173
+SSSA
Sbjct: 82 LSSSA 86
>gi|344289010|ref|XP_003416239.1| PREDICTED: short stature homeobox protein 2-like [Loxodonta
africana]
Length = 275
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 132 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 186
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLL---HDEHK 209
WFQNRRA+ ++++ N LH G GA + V +L + D H
Sbjct: 187 QVWFQNRRAKCRKQE------NQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHC 240
Query: 210 TTKPENLSSAHSTSQPQHLRNL 231
P + A +TS+ + +L
Sbjct: 241 NVTPLAATDAKTTSKNSSIADL 262
>gi|443894059|dbj|GAC71409.1| hypothetical protein PANT_3c00014 [Pseudozyma antarctica T-34]
Length = 863
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 15/77 (19%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
TP QL+ LE+ F++ ++ I +ELS+ ++ E +V WFQNRRA+ K
Sbjct: 277 TPEQLRSLEAFFEK-----NRNPTGRIRLELSRKLRMPERSVQVWFQNRRAKVK------ 325
Query: 171 SSANTLHNGGGGGAGAG 187
T+ G GG+ +G
Sbjct: 326 ----TIERRGDGGSDSG 338
>gi|66809961|ref|XP_638704.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
gi|74996893|sp|Q54PU1.1|HBX10_DICDI RecName: Full=Homeobox protein 10; Short=DdHbx-10
gi|60467302|gb|EAL65335.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
Length = 638
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 73 SAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQ 132
S DL+A+ G L G + + ++R +P QL ILE IF+ PS+Q
Sbjct: 281 SGMVDLSASTGDLL----------GSLNAANKKKRQRTSPEQLAILEQIFETD-KMPSQQ 329
Query: 133 KIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
I V L+ +S V WFQN+RA+ KR
Sbjct: 330 ----IRVRLANQLGMSSRRVQIWFQNKRAKVKR 358
>gi|161076856|ref|NP_001097140.1| CG34367, isoform C [Drosophila melanogaster]
gi|157400139|gb|ABV53663.1| CG34367, isoform C [Drosophila melanogaster]
Length = 420
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 89 YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
+CDPL TS K R R T QL LE +F++ T P ++E ELSQ +S
Sbjct: 179 HCDPLDTSLVNTK-QRRSRTNFTLDQLNELERLFEE-THYPDA-FMRE---ELSQRLGLS 232
Query: 149 ETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA 184
E V WFQNRRA+ ++ + N +H G G+
Sbjct: 233 EARVQVWFQNRRAKCRKHE------NQMHKGFLVGS 262
>gi|156367335|ref|XP_001627373.1| predicted protein [Nematostella vectensis]
gi|156214281|gb|EDO35273.1| predicted protein [Nematostella vectensis]
Length = 73
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 105 RQRWTPTPVQLQILESIFDQG---TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
R R TP QL LE+ FD+ GT KQ L+ + ++SET V WFQNRR
Sbjct: 2 RVRTAFTPFQLLCLETSFDKNHYVVGTERKQ--------LASYLKLSETQVKVWFQNRRT 53
Query: 162 RSKRKQL 168
+ KR+ L
Sbjct: 54 KWKRQAL 60
>gi|18996777|gb|AAL83210.1|AF465939_1 paired-like homeodomain transcription factor Shox [Branchiostoma
floridae]
Length = 286
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QLQ LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 106 RSRTNFTLEQLQELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 160
Query: 165 RKQLVSSSANTLHNGG 180
+++ N L GG
Sbjct: 161 KQE------NQLQKGG 170
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 73 SAHQDLAAAGGRLGNIYCDPLMTSGG----GHKISARQRWTPTPVQLQILESIFDQGTGT 128
S +DL +G +G++ SGG G K R R T T QL LE F++ +
Sbjct: 81 SGAEDLNDSGESIGDVATHSDCESGGEGDMGKKKHRRNRTTFTTYQLHELERAFEK-SHY 139
Query: 129 PSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGA 188
P +E+ ++++ + E V WFQNRRA+ +R++ + +++ L+ + A
Sbjct: 140 PDVYSREELALKIN----LPEVRVQVWFQNRRAKWRRQEKLETASLKLNENFPMKSLAPR 195
Query: 189 GGADSE---VETEVDSLLLHDEHKTTKPENLSSAHSTSQPQHL 228
+ ++ + + +L+ H + P LS TS P +L
Sbjct: 196 TPCITNTLPIDPWLTAPMLNTAHMASLPGFLSHHTGTSYPSYL 238
>gi|1616756|gb|AAC52832.1| OG-12a homeodomain protein, partial [Mus musculus]
Length = 210
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 9 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 63
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 64 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 91
>gi|327266940|ref|XP_003218261.1| PREDICTED: short stature homeobox protein 2-like [Anolis
carolinensis]
Length = 167
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 40 MEDEGQAKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 94
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 95 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 122
>gi|260817384|ref|XP_002603567.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
gi|229288886|gb|EEN59578.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
Length = 275
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QLQ LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 106 RSRTNFTLEQLQELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 160
Query: 165 RKQLVSSSANTLHNGG 180
+++ N L GG
Sbjct: 161 KQE------NQLQKGG 170
>gi|159232374|emb|CAM32360.1| putative wuschel homeobox protein [Brachypodium distachyon]
Length = 41
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q++ILE+IF+ G P +++I I V+L Q+GQ+ + NV+
Sbjct: 1 QIRILEAIFNSGMVNPPREEIHRIRVQLQQYGQVGDANVF 40
>gi|431915191|gb|ELK15878.1| Short stature homeobox protein 2 [Pteropus alecto]
Length = 318
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 127 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 181
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 182 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 209
>gi|321475701|gb|EFX86663.1| putative transcriptional factor orthodenticle 2 protein [Daphnia
pulex]
Length = 479
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GG + R+R T T QL +LES+F + T P +E+ +++S + E+ V WF
Sbjct: 27 GGAGRKQRRERTTFTRGQLDVLESLFAK-TRYPDIFMREEVALKIS----LPESRVQVWF 81
Query: 157 QNRRA--RSKRKQLVSSSANTLHNGGGGG 183
+NRRA R ++KQ HNG GG
Sbjct: 82 KNRRAKCRQQQKQQQQQQQQQQHNGAAGG 110
>gi|109132103|ref|XP_001084578.1| PREDICTED: rhox homeobox family member 1 [Macaca mulatta]
gi|355705116|gb|EHH31041.1| Paired-like homeobox protein PEPP-1 [Macaca mulatta]
gi|355757666|gb|EHH61191.1| Paired-like homeobox protein PEPP-1 [Macaca fascicularis]
Length = 185
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP+Q+Q LES+F Q P+++ EL+++ ++E V WF+N+RAR +R Q
Sbjct: 110 TPLQVQELESVFQRTQYPDVPTRR-------ELAENLGVTEDKVRVWFKNKRARCRRYQR 162
Query: 169 VSSSANTL 176
AN L
Sbjct: 163 ELMLANEL 170
>gi|1616755|gb|AAC52831.1| OG-12b homeodomain protein, partial [Mus musculus]
Length = 198
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 9 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 63
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 64 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 91
>gi|355746939|gb|EHH51553.1| hypothetical protein EGM_10952 [Macaca fascicularis]
Length = 281
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 80 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 134
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 135 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 162
>gi|403265984|ref|XP_003925185.1| PREDICTED: short stature homeobox protein 2 [Saimiri boliviensis
boliviensis]
Length = 301
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 100 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 154
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 155 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 182
>gi|72087523|ref|XP_790816.1| PREDICTED: homeobox protein unc-4-like [Strongylocentrotus
purpuratus]
Length = 237
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QLQILE+ F+ Q G +++ +L+ ++ E + WFQNRR R +R L
Sbjct: 29 TELQLQILETAFNDNQYPGINARE-------QLASSLKLGEDRILAWFQNRRTRLRRASL 81
Query: 169 VSSSA 173
+SSSA
Sbjct: 82 LSSSA 86
>gi|402587166|gb|EJW81101.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 188
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 74 AHQDLAAAGGRLGNIYCDPLMTSG-------GGHKISARQRWTPTPVQLQILESIFDQGT 126
AH L G +GN D T+G + R+R T + +QL++LE+ F
Sbjct: 53 AHNFLPGGMGYIGNSLAD-CQTAGITAWNASQAARKQRRERTTFSRIQLEVLENYF---- 107
Query: 127 GTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLH 177
SK + +I + E+S Q+ E+ V WF+NRRA++++++ + LH
Sbjct: 108 ---SKTRYPDIFIREEISLKIQLPESRVQVWFKNRRAKARQQKKATKHEVALH 157
>gi|189522748|ref|XP_682960.3| PREDICTED: homeobox protein koza [Danio rerio]
Length = 337
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
MT GGG K R R T +Q+ LE F + + ++ L+ ++ET V
Sbjct: 214 MTGGGGKK--KRSRAAFTHLQVLELEKKFSRQRYLSAPER-----THLASALHLTETQVK 266
Query: 154 NWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAG 187
WFQNRR ++KR+QL + + A A
Sbjct: 267 IWFQNRRYKTKRRQLTTEHSKDYFQKSNAAAMAA 300
>gi|395853430|ref|XP_003799213.1| PREDICTED: homeobox protein prophet of Pit-1-like [Otolemur
garnettii]
Length = 226
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 68 MHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTG 127
M S A++ L+ G R+G P G R R T +PVQL+ LES F
Sbjct: 36 MDMSAQAYRKLS--GARVGRPRLSPQGAQRGRPHFRRRHRTTFSPVQLEQLESAFG---- 89
Query: 128 TPSKQKIKEITVE--LSQHGQISETNVYNWFQNRRARSKR 165
+ + +I L+Q +SE + WFQNRRA+ ++
Sbjct: 90 ---RNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRK 126
>gi|195425783|ref|XP_002061148.1| GK10326 [Drosophila willistoni]
gi|194157233|gb|EDW72134.1| GK10326 [Drosophila willistoni]
Length = 278
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---R 165
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ + R
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQAR 84
Query: 166 KQLVSSS--ANTLHNG------GGGGAGAGAGG 190
QL+ + L G GG GAG +GG
Sbjct: 85 LQLLQDAWRMRCLSLGTPPVIAGGTGAGTPSGG 117
>gi|2980872|emb|CAA05342.1| homeobox protein SHOTb [Homo sapiens]
Length = 190
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P ++E ELSQ +SE V
Sbjct: 1 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA-FMRE---ELSQRLGLSEARV 55
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 56 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 83
>gi|2995252|emb|CAA05341.1| homeobox protein SHOTa [Homo sapiens]
Length = 251
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 50 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 104
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 105 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 132
>gi|391337785|ref|XP_003743245.1| PREDICTED: uncharacterized protein LOC100901974 [Metaseiulus
occidentalis]
Length = 332
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI--TVELSQHGQISETNVYNWF 156
G K + R T QL+ LE F+ KQK + +EL+ +++T V W+
Sbjct: 153 GSKKPRKARTAFTDHQLKTLEKSFE-------KQKYLSVQDRMELAARLDLTDTQVKTWY 205
Query: 157 QNRRARSKRKQLVS------SSANTLHNGGGGGAGAG 187
QNRR + KR+ + ++ L NGGGG AG
Sbjct: 206 QNRRTKWKRQAMFGLDFLPIAARQMLLNGGGGSPTAG 242
>gi|2632119|emb|CAA05285.1| Prx3B [Rattus norvegicus]
Length = 215
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 26 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 80
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 81 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 108
>gi|1519542|gb|AAC52834.1| OG12b homeodomain protein [Mus musculus]
gi|2979680|gb|AAC39662.1| homeodomain protein [Homo sapiens]
gi|119599102|gb|EAW78696.1| hCG1786841, isoform CRA_b [Homo sapiens]
gi|119599104|gb|EAW78698.1| hCG1786841, isoform CRA_b [Homo sapiens]
gi|149048356|gb|EDM00932.1| short stature homeobox 2, isoform CRA_c [Rattus norvegicus]
gi|193787827|dbj|BAG53030.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P ++E ELSQ +SE V
Sbjct: 1 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA-FMRE---ELSQRLGLSEARV 55
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 56 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 83
>gi|7305489|ref|NP_038693.1| short stature homeobox protein 2 [Mus musculus]
gi|18202340|sp|P70390.1|SHOX2_MOUSE RecName: Full=Short stature homeobox protein 2; AltName:
Full=Homeobox protein Og12X; Short=OG-12; AltName:
Full=Paired family homeodomain protein Prx3
gi|1616758|gb|AAC52833.1| OG-12a homeodomain protein [Mus musculus]
gi|148683581|gb|EDL15528.1| short stature homeobox 2, isoform CRA_a [Mus musculus]
gi|225000966|gb|AAI72634.1| Short stature homeobox 2 [synthetic construct]
Length = 331
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|294854649|gb|ADF44266.1| mix homeobox [Ambystoma mexicanum]
Length = 367
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPS---KQKIKEITVELSQHGQISETNVYNWFQNRRA 161
R+R + +P QLQ LE +F G P ++++ +T+ + E+ + WFQNRRA
Sbjct: 112 RKRTSFSPAQLQALELVFSS-NGYPDIHLREELAALTL-------LPESRIQVWFQNRRA 163
Query: 162 RSKR-KQLVSSSANTLHNGGGGGAG 185
+S+R K S T+ +G G G
Sbjct: 164 KSRRYKSNPPRSPGTMEHGLGNSGG 188
>gi|345329605|ref|XP_001512907.2| PREDICTED: hypothetical protein LOC100082215 [Ornithorhynchus
anatinus]
Length = 419
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 96 SGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE--LSQHGQISETN 151
+ GG S+ R+R + +P QLQ+LE +F + +I + L+ Q+ E+
Sbjct: 263 AAGGPAASSQRRKRTSFSPEQLQLLELVFR-------RTMYPDINLRDRLAALTQLPESR 315
Query: 152 VYNWFQNRRARSKRKQLVSSSANTL 176
+ WFQNRRA+S+R++ S S L
Sbjct: 316 IQVWFQNRRAKSRRQKGKSCSYPAL 340
>gi|395842775|ref|XP_003794187.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Otolemur
garnettii]
Length = 328
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 127 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 181
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 182 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 209
>gi|410896362|ref|XP_003961668.1| PREDICTED: short stature homeobox protein-like isoform 1 [Takifugu
rubripes]
Length = 282
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G G R R T QL LE +FD+ T P + ELSQ +SE V WF
Sbjct: 101 GQGKLKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWF 155
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
QNRRA+ ++++ N +H G G+G+
Sbjct: 156 QNRRAKCRKQE------NQMHKGVILGSGS 179
>gi|149048354|gb|EDM00930.1| short stature homeobox 2, isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|296491159|tpg|DAA33232.1| TPA: short stature homeobox 2-like isoform 1 [Bos taurus]
Length = 331
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|410971112|ref|XP_003992017.1| PREDICTED: short stature homeobox protein 2-like [Felis catus]
Length = 233
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 32 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 86
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 87 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 114
>gi|336389888|gb|EGO31031.1| hypothetical protein SERLADRAFT_432690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 367
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRAR 162
+ R R T QL LE +F Q T PSKQK K++ EL+ + + V WFQNRR
Sbjct: 56 TKRSRHRMTSEQLVFLEDVFKQDTH-PSKQKKKDVAGELNMNFK----TVTIWFQNRRQI 110
Query: 163 SKRKQLVSSSANTLHNG-GGGGAGAGAGGADSE 194
+K+ Q VS+SA+ G A + A D+E
Sbjct: 111 TKKNQAVSASASASATPVSGSPAASTANEEDAE 143
>gi|74203026|dbj|BAE26214.1| unnamed protein product [Mus musculus]
Length = 222
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 33 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 87
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 88 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 115
>gi|384495112|gb|EIE85603.1| hypothetical protein RO3G_10313 [Rhizopus delemar RA 99-880]
Length = 301
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
I R+R++P + ILE +D+ P+++KI+ I + +I V WFQNRRA
Sbjct: 6 IKHRRRFSPE--ETHILEKEYDRNPN-PTQEKIQHIANGIGTPRKI----VTTWFQNRRA 58
Query: 162 RSKRKQLVSSSAN 174
++KRK+ + S N
Sbjct: 59 KNKRKEKLKSQEN 71
>gi|281364781|ref|NP_001162934.1| CG34367, isoform B [Drosophila melanogaster]
gi|124248424|gb|ABM92832.1| IP17602p [Drosophila melanogaster]
gi|272406982|gb|AAF52920.2| CG34367, isoform B [Drosophila melanogaster]
Length = 297
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 89 YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
+CDPL TS K R R T QL LE +F++ T P ++E ELSQ +S
Sbjct: 56 HCDPLDTSLVNTK-QRRSRTNFTLDQLNELERLFEE-THYPDA-FMRE---ELSQRLGLS 109
Query: 149 ETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA 184
E V WFQNRRA+ ++ + N +H G G+
Sbjct: 110 EARVQVWFQNRRAKCRKHE------NQMHKGFLVGS 139
>gi|89145413|ref|NP_006875.2| short stature homeobox protein 2 isoform a [Homo sapiens]
gi|109048538|ref|XP_001102416.1| PREDICTED: hypothetical protein LOC704327 isoform 2 [Macaca
mulatta]
gi|410037685|ref|XP_003950270.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
gi|145559528|sp|O60902.4|SHOX2_HUMAN RecName: Full=Short stature homeobox protein 2; AltName:
Full=Homeobox protein Og12X; AltName:
Full=Paired-related homeobox protein SHOT
gi|119599101|gb|EAW78695.1| hCG1786841, isoform CRA_a [Homo sapiens]
Length = 331
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|296227718|ref|XP_002759505.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Callithrix
jacchus]
Length = 331
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|432117247|gb|ELK37677.1| Short stature homeobox protein 2 [Myotis davidii]
Length = 193
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 1 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 55
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 56 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 83
>gi|9759254|dbj|BAB09778.1| unnamed protein product [Arabidopsis thaliana]
Length = 215
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 103 SARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
++ RW PT Q+ +LE+++ +G TPS +I++IT L +G I V ++
Sbjct: 10 ASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEVGCVSPYY 63
>gi|312098745|ref|XP_003149150.1| hypothetical protein LOAG_13596 [Loa loa]
Length = 189
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R+R T T +QL++LE+ F SK + +I + E+S Q+ E+ V WF+NRRA+
Sbjct: 4 RERTTFTRIQLEVLENYF-------SKTRYPDIFIREEISLKIQLPESRVQVWFKNRRAK 56
Query: 163 SKRKQLVSSSANTLH 177
+++++ + LH
Sbjct: 57 ARQQKKATKHEVALH 71
>gi|118343954|ref|NP_001071802.1| transcription factor protein [Ciona intestinalis]
gi|70570975|dbj|BAE06655.1| transcription factor protein [Ciona intestinalis]
Length = 744
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P G G + +R R T + Q+ LE +F + P+ Q +E L+++ ++ E
Sbjct: 141 PQRCDGNGSRNLSRGRTTYSVDQITELEKLFTRN-AYPTPQSRQE----LARNIRVPEGK 195
Query: 152 VYNWFQNRRARSKRKQLVSSSA 173
V WFQNRRAR+K+++++SS++
Sbjct: 196 VKIWFQNRRARAKKQRMLSSNS 217
>gi|426342668|ref|XP_004037958.1| PREDICTED: short stature homeobox protein 2 isoform 3 [Gorilla
gorilla gorilla]
Length = 331
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|410896364|ref|XP_003961669.1| PREDICTED: short stature homeobox protein-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G G R R T QL LE +FD+ T P + ELSQ +SE V WF
Sbjct: 101 GQGKLKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWF 155
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
QNRRA+ ++++ N +H G G+G+
Sbjct: 156 QNRRAKCRKQE------NQMHKGVILGSGS 179
>gi|18202029|sp|O35750.2|SHOX2_RAT RecName: Full=Short stature homeobox protein 2; AltName:
Full=Paired family homeodomain protein Prx3
Length = 237
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 36 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 90
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 91 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 118
>gi|393907479|gb|EFO14919.2| hypothetical protein LOAG_13596, partial [Loa loa]
Length = 190
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R+R T T +QL++LE+ F SK + +I + E+S Q+ E+ V WF+NRRA+
Sbjct: 5 RERTTFTRIQLEVLENYF-------SKTRYPDIFIREEISLKIQLPESRVQVWFKNRRAK 57
Query: 163 SKRKQLVSSSANTLH 177
+++++ + LH
Sbjct: 58 ARQQKKATKHEVALH 72
>gi|359322628|ref|XP_542854.4| PREDICTED: short stature homeobox protein 2 isoform 1 [Canis lupus
familiaris]
Length = 331
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|219560132|gb|ACL27274.1| homeodomain leucine-zipper 1 [Nicotiana benthamiana]
Length = 263
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
AR+++ T Q +LE F Q T KQK EL+++ + V WFQNRRAR+
Sbjct: 118 ARKKFRLTKAQSALLEESFKQHTTLNPKQK-----QELARNLNLRPRQVEVWFQNRRART 172
Query: 164 KRKQ 167
K KQ
Sbjct: 173 KLKQ 176
>gi|441633602|ref|XP_004092982.1| PREDICTED: LOW QUALITY PROTEIN: short stature homeobox protein 2,
partial [Nomascus leucogenys]
Length = 308
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 107 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 161
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 162 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 189
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA--R 162
R R T T QL LE F++ T P +E+ + L +SE V WFQNRRA R
Sbjct: 102 RSRTTFTTYQLHQLERAFEK-TQYPDVFTREELALRLD----LSEARVQVWFQNRRAKWR 156
Query: 163 SKRKQLVSSSANTLHNGGGG 182
+ K L S N ++ G GG
Sbjct: 157 KREKALGRESPNFMYPGHGG 176
>gi|149048355|gb|EDM00931.1| short stature homeobox 2, isoform CRA_b [Rattus norvegicus]
Length = 319
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|148683582|gb|EDL15529.1| short stature homeobox 2, isoform CRA_b [Mus musculus]
Length = 206
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 17 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 71
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 72 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 99
>gi|329664954|ref|NP_001192456.1| short stature homeobox protein 2 [Bos taurus]
gi|296491160|tpg|DAA33233.1| TPA: short stature homeobox 2-like isoform 2 [Bos taurus]
Length = 358
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 157 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 211
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 212 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 239
>gi|402896337|ref|XP_003911259.1| PREDICTED: paired mesoderm homeobox protein 2 [Papio anubis]
Length = 258
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL+Q +SE V WFQNRRA R++R L S
Sbjct: 120 QLQALERVFER-THYPDA-FVRE---ELAQRVNLSEARVQVWFQNRRAKFRRNERAMLAS 174
Query: 171 SSANTL 176
SA+ L
Sbjct: 175 RSASLL 180
>gi|395842773|ref|XP_003794186.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Otolemur
garnettii]
Length = 316
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 127 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 181
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 182 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 209
>gi|348581189|ref|XP_003476360.1| PREDICTED: short stature homeobox protein 2-like isoform 1 [Cavia
porcellus]
Length = 332
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 131 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 185
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 186 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 213
>gi|296227720|ref|XP_002759506.1| PREDICTED: short stature homeobox protein 2 isoform 3 [Callithrix
jacchus]
Length = 319
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|254750649|ref|NP_001157150.1| short stature homeobox protein 2 isoform c [Homo sapiens]
gi|332818202|ref|XP_003310112.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
Length = 319
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|443726371|gb|ELU13551.1| hypothetical protein CAPTEDRAFT_165954 [Capitella teleta]
Length = 329
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T + QL +LES+F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 71 RERTTFSRAQLDVLESLFGK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 125
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
++Q + AN +GG G+ A
Sbjct: 126 QQQKAAEQAN--KSGGSTGSSA 145
>gi|296491161|tpg|DAA33234.1| TPA: short stature homeobox 2-like isoform 3 [Bos taurus]
Length = 319
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|195124191|ref|XP_002006577.1| GI21136 [Drosophila mojavensis]
gi|193911645|gb|EDW10512.1| GI21136 [Drosophila mojavensis]
Length = 277
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 90 CDPLMTSGGGH-KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
CD L GH + R R T + QL LE +F++ T P ++E EL+ +S
Sbjct: 111 CDWLGCGCSGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDA-FVRE---ELATKVHLS 165
Query: 149 ETNVYNWFQNRRARSKRKQ 167
E V WFQNRRA+ +R +
Sbjct: 166 EARVQVWFQNRRAKFRRNE 184
>gi|440895775|gb|ELR47885.1| Short stature homeobox protein 2, partial [Bos grunniens mutus]
Length = 291
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P ++E ELSQ +SE V
Sbjct: 87 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA-FMRE---ELSQRLGLSEARV 141
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 142 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 169
>gi|426342664|ref|XP_004037956.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 319
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|254750647|ref|NP_003021.3| short stature homeobox protein 2 isoform b [Homo sapiens]
gi|114590047|ref|XP_001153180.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Pan
troglodytes]
gi|397521199|ref|XP_003830686.1| PREDICTED: short stature homeobox protein 2 [Pan paniscus]
gi|14250720|gb|AAH08829.1| SHOX2 protein [Homo sapiens]
gi|119599103|gb|EAW78697.1| hCG1786841, isoform CRA_c [Homo sapiens]
gi|313882574|gb|ADR82773.1| short stature homeobox 2 [synthetic construct]
Length = 355
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 154 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 208
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 209 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 236
>gi|359322630|ref|XP_003639881.1| PREDICTED: short stature homeobox protein 2 [Canis lupus
familiaris]
Length = 319
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|348587768|ref|XP_003479639.1| PREDICTED: homeobox protein MSX-3-like [Cavia porcellus]
Length = 202
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 78 LAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI 137
L AA R P T G HK + + R T QL LE F Q KQ +
Sbjct: 63 LPAASTRTPRALSPPPCTLGK-HKNTRKPRTPFTTAQLLALERRFHQ------KQYLSVA 115
Query: 138 -TVELSQHGQISETNVYNWFQNRRARSKRKQ 167
E S+ ++ET V WFQNRRA++KR Q
Sbjct: 116 ERAEFSRSLSLTETQVKIWFQNRRAKAKRLQ 146
>gi|348581191|ref|XP_003476361.1| PREDICTED: short stature homeobox protein 2-like isoform 2 [Cavia
porcellus]
Length = 320
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 131 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 185
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 186 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 213
>gi|406601479|emb|CCH46894.1| Homeobox protein aristaless-like 4 [Wickerhamomyces ciferrii]
Length = 395
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S H+++ R+R +P++L IL+ F++G TP+K + +E++++ ++E + W
Sbjct: 122 SIDNHQLARRKRRRTSPLELSILQDEFEKG-STPNKAR----RLEIAKNVNMTEKAIQIW 176
Query: 156 FQNRRARSKRK 166
FQNRR +R+
Sbjct: 177 FQNRRQTLRRQ 187
>gi|57886|emb|CAA41944.1| Hox-7 protein [Mus musculus]
gi|1245740|gb|AAB35456.1| Msx1=homeobox gene [mice, Peptide, 299 aa]
Length = 299
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKR-------------KQLVSSSANTLHNGGGGGAGAGA 188
RRA++KR K ++ +A L GG A AGA
Sbjct: 223 RRAKAKRLQEAELEKLKMAAKPMLPPAAFGLSFPLGGPAAAGA 265
>gi|296227716|ref|XP_002759504.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Callithrix
jacchus]
Length = 357
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 156 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 210
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 211 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 238
>gi|426342666|ref|XP_004037957.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 355
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 154 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 208
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 209 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 236
>gi|6981534|ref|NP_037160.1| short stature homeobox protein 2 [Rattus norvegicus]
gi|2632117|emb|CAA05284.1| Prx3A'' [Rattus norvegicus]
Length = 233
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 32 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 86
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 87 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 114
>gi|343403798|ref|NP_001230281.1| short stature homeobox 2 [Sus scrofa]
Length = 321
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 132 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 186
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 187 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 214
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA--R 162
R R T T QL LE F++ T P +E+ + L +SE V WFQNRRA R
Sbjct: 22 RSRTTFTTYQLHQLERAFEK-TQYPDVFTREELALRLD----LSEARVQVWFQNRRAKWR 76
Query: 163 SKRKQLVSSSANTLHNGGGG 182
+ K L S N ++ G GG
Sbjct: 77 KREKALGRESPNFMYPGHGG 96
>gi|443729070|gb|ELU15122.1| hypothetical protein CAPTEDRAFT_183448 [Capitella teleta]
Length = 267
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
GG G+ + DP M K R R +P QL LE F++ + + + EL
Sbjct: 156 GGFFGHRFPDPSMLLQPFRK-PKRIRTAFSPSQLLRLEHAFEK-----NHYVVGQERKEL 209
Query: 142 SQHGQISETNVYNWFQNRRARSKRK 166
+Q+ ++ET V WFQNRR + KR+
Sbjct: 210 AQNLSLTETQVKVWFQNRRTKFKRR 234
>gi|291400068|ref|XP_002716329.1| PREDICTED: short stature homeobox 2-like [Oryctolagus cuniculus]
Length = 238
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 37 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 91
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 92 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 119
>gi|195473619|ref|XP_002089090.1| GE26064 [Drosophila yakuba]
gi|194175191|gb|EDW88802.1| GE26064 [Drosophila yakuba]
Length = 420
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 89 YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
+CDPL +S K R R T QL LE +F++ T P ++E ELSQ +S
Sbjct: 179 HCDPLDSSMVNTK-QRRSRTNFTLDQLNELERLFEE-THYP-DAFMRE---ELSQRLGLS 232
Query: 149 ETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA 184
E V WFQNRRA+ ++ + N +H G G+
Sbjct: 233 EARVQVWFQNRRAKCRKHE------NQMHKGFLVGS 262
>gi|157278223|ref|NP_001098211.1| Medaka OG-12 [Oryzias latipes]
gi|2959596|gb|AAC05613.1| Medaka OG-12 [Oryzias latipes]
Length = 282
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 109 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 163
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G+G+
Sbjct: 164 KQE------NQMHKGVILGSGS 179
>gi|109048534|ref|XP_001102324.1| PREDICTED: hypothetical protein LOC704327 isoform 1 [Macaca
mulatta]
gi|402861120|ref|XP_003894953.1| PREDICTED: short stature homeobox protein 2 [Papio anubis]
Length = 355
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 154 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 208
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 209 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 236
>gi|393235100|gb|EJD42657.1| hypothetical protein AURDEDRAFT_114920 [Auricularia delicata
TFB-10046 SS5]
Length = 715
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 114 QLQILESIF--DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSS 171
QLQ+LE++F DQ G ++K+ VELS ++ +V WFQNRRA+ K ++
Sbjct: 75 QLQVLEAVFVDDQKPGPAIRKKL---AVELS----MTPRSVQVWFQNRRAKDKNLAKKAA 127
Query: 172 SANTLHNGGGGGAGAGAGG 190
NG A G
Sbjct: 128 LIAAQQNGASDAPAAATLG 146
>gi|358255529|dbj|GAA57221.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 838
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
G L PL + G K AR R T + QL ILE+ FD P ++I L
Sbjct: 210 SGELPTPSSSPLASENKGKK--ARHRTTFSVHQLSILEAAFD-SCPYPDAVTREDIASRL 266
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQ 167
+ +SE+ V WFQNRRA+ ++++
Sbjct: 267 A----LSESRVQVWFQNRRAKWRKQE 288
>gi|351710455|gb|EHB13374.1| Short stature homeobox protein 2 [Heterocephalus glaber]
Length = 316
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|301604045|ref|XP_002931669.1| PREDICTED: ALX homeobox protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 60 TICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILE 119
T C V K+++ DL G + CD ++S R R T T +QL+ LE
Sbjct: 98 TCCSLAVSPGKAMADKVDLDELGDK-----CDSNVSSSKKR----RHRTTFTSLQLEELE 148
Query: 120 SIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+F Q T P ++E +L+ +++E V WFQNRRA+ ++++
Sbjct: 149 KVF-QKTHYPDVY-VRE---QLALRTELTEARVQVWFQNRRAKWRKRE 191
>gi|302764372|ref|XP_002965607.1| hypothetical protein SELMODRAFT_407131 [Selaginella moellendorffii]
gi|300166421|gb|EFJ33027.1| hypothetical protein SELMODRAFT_407131 [Selaginella moellendorffii]
Length = 248
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ +QRW P QLQILE + + T PS + I I EL GQ+ + VY WF N++
Sbjct: 55 VGVQQRWEPNSYQLQILEEFYAKAT-PPSPENIANIA-ELV--GQVDHSKVYYWFSNKK 109
>gi|148683583|gb|EDL15530.1| short stature homeobox 2, isoform CRA_c [Mus musculus]
Length = 309
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 184
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 185 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 212
>gi|195392407|ref|XP_002054849.1| GJ22569 [Drosophila virilis]
gi|194152935|gb|EDW68369.1| GJ22569 [Drosophila virilis]
Length = 496
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R +P QL LE F+ ++ + L+Q +SET V WFQNRR + K
Sbjct: 392 RIRTAFSPSQLLKLEHAFES-----NQYVVGAERKALAQSLNLSETQVKVWFQNRRTKHK 446
Query: 165 RKQLVSSSANTLHNGGGGGA------GAGAGGADSEVETEVDSLLLHDEH 208
R Q GGG G+ G+G D ++ E+D DEH
Sbjct: 447 RMQQEDE------KGGGSGSERNMHNGSGDEDDDELIDMEMDDCASDDEH 490
>gi|324515962|gb|ADY46374.1| Paired box protein Pax-2-A [Ascaris suum]
Length = 335
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 112 PVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
P QL LES+F + TP+++ + L++ Q+ E + WF NRRA+ +R Q S
Sbjct: 243 PEQLACLESVFANSPYPTPAER------IALTKKTQLPEARIQVWFSNRRAKWRRAQQES 296
Query: 171 SSANT 175
+SA T
Sbjct: 297 TSATT 301
>gi|348528188|ref|XP_003451600.1| PREDICTED: short stature homeobox protein-like isoform 1
[Oreochromis niloticus]
Length = 285
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 109 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 163
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G+G+
Sbjct: 164 KQE------NQMHKGVILGSGS 179
>gi|195012799|ref|XP_001983749.1| GH16064 [Drosophila grimshawi]
gi|193897231|gb|EDV96097.1| GH16064 [Drosophila grimshawi]
Length = 632
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 330 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 384
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 385 RHQRMNLLKRQRSSPANPLHS 405
>gi|2632115|emb|CAA05283.1| Prx3A [Rattus norvegicus]
Length = 221
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 32 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 86
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 87 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 114
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 65 LVEMHKSLS--AHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIF 122
++++H S+S H A G L N G + R R T T QL LE F
Sbjct: 10 VIQVHNSISLGVHNVDAKHDGSLLNSEEYQNQRFSNGKRKQRRYRTTFTQFQLDELERAF 69
Query: 123 DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGG 182
D+ T P +E+ V + ++E V WFQNRRA+ ++++ +S + + +G G
Sbjct: 70 DK-THYPDVFMREELAVRV----HLTEARVQVWFQNRRAKWRKREKLSYNVHQQQHGSNG 124
Query: 183 GAGA 186
+
Sbjct: 125 EVSS 128
>gi|195160623|ref|XP_002021174.1| GL24956 [Drosophila persimilis]
gi|194118287|gb|EDW40330.1| GL24956 [Drosophila persimilis]
Length = 618
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 304 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 358
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 359 RHQRMNLLKRQRSSPANPLHS 379
>gi|308220102|gb|ADO22623.1| PRD class homeobox transcription factor PRD16 [Mnemiopsis leidyi]
Length = 307
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 93 LMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
L++ K+ R R T T QL+ LE F Q T P +EI L Q++E V
Sbjct: 147 LISVKSKSKLQRRNRITFTAAQLEGLEKSF-QETHYPDVFGREEIAYSL----QLTEQRV 201
Query: 153 YNWFQNRRARSKRKQLVS 170
WFQNRRA+ +++Q +S
Sbjct: 202 QVWFQNRRAKWRKRQKLS 219
>gi|348528190|ref|XP_003451601.1| PREDICTED: short stature homeobox protein-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 109 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 163
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G+G+
Sbjct: 164 KQE------NQMHKGVILGSGS 179
>gi|343425808|emb|CBQ69341.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
++R TP QL+ LE+ F++ ++ I +ELS+ ++ E +V WFQNRRA+ K
Sbjct: 242 KKRNKCTPDQLRSLEAFFEK-----NRNPTGRIRLELSRKLRMPERSVQVWFQNRRAKVK 296
>gi|195045512|ref|XP_001991987.1| GH24457 [Drosophila grimshawi]
gi|193892828|gb|EDV91694.1| GH24457 [Drosophila grimshawi]
Length = 264
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---R 165
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ + R
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQAR 84
Query: 166 KQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQP 225
QL+ + G GGA+ S PENLS+ +T+
Sbjct: 85 LQLLQDAWRMRCLSLGTPPVIAGGGANRPANNGTAS-----NGNNQMPENLSAGSTTASK 139
Query: 226 QHLRN 230
+ L N
Sbjct: 140 ESLIN 144
>gi|397465680|ref|XP_003804615.1| PREDICTED: rhox homeobox family member 1-like [Pan paniscus]
Length = 192
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 111 TPVQLQILESIF--DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP+Q++ LES+F Q P++ +EL+++ ++E V WF+N+RAR +R Q
Sbjct: 119 TPLQVEELESVFRHTQYPDVPTR-------MELAENLGVTEDKVRVWFKNKRARCRRHQR 171
Query: 169 VSSSANTL 176
AN L
Sbjct: 172 ELMLANEL 179
>gi|195055678|ref|XP_001994740.1| GH14408 [Drosophila grimshawi]
gi|193892503|gb|EDV91369.1| GH14408 [Drosophila grimshawi]
Length = 506
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 86 GNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
GN P + R R +P QL LE F+ ++ + L+Q
Sbjct: 390 GNFLLQPF-------RKPKRIRTAFSPSQLLKLEHAFES-----NQYVVGAERKALAQSL 437
Query: 146 QISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSEVETEV 199
+SET V WFQNRR + KR Q GGG G+ G+G D ++ E+
Sbjct: 438 NLSETQVKVWFQNRRTKHKRMQQEDE------KGGGSGSERHMHNGSGDEDDDELIDMEM 491
Query: 200 DSLLLHDEH 208
D DEH
Sbjct: 492 DECASDDEH 500
>gi|345317149|ref|XP_001507913.2| PREDICTED: short stature homeobox protein 2-like [Ornithorhynchus
anatinus]
Length = 506
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 93 LMTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
+M G KI R+ R T QL LE +FD+ T P + ELSQ +SE
Sbjct: 304 VMEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEAR 358
Query: 152 VYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
V WFQNRRA+ ++++ N LH G GA +
Sbjct: 359 VQVWFQNRRAKCRKQE------NQLHKGVLIGAAS 387
>gi|302757932|ref|XP_002962389.1| hypothetical protein SELMODRAFT_404134 [Selaginella moellendorffii]
gi|300169250|gb|EFJ35852.1| hypothetical protein SELMODRAFT_404134 [Selaginella moellendorffii]
Length = 312
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRR 160
+ +QRW P QLQILE + + T PS + I I EL GQ+ + VY WF N++
Sbjct: 125 VGVQQRWEPNSYQLQILEEFYAKAT-PPSPENIANIA-ELV--GQVDHSKVYYWFSNKK 179
>gi|194353810|emb|CAK50843.1| orthodenticle protein [Glomeris marginata]
Length = 275
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R+R T T QL ILE +F SK + +I + E++ + E+ V WF+NRRA+
Sbjct: 53 RERTTFTRAQLDILECLF-------SKTRYSDIFMREEVALKINLPESRVQVWFKNRRAK 105
Query: 163 SKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHD 206
+++Q + GGG GA + T + + D
Sbjct: 106 CRQQQKQQQQQESCSAEVGGGGGAKSPRCSKRPRTPPPTATMTD 149
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LE +F + T P +E+ +++ ++E V WFQNRRA+ +
Sbjct: 92 RIRTTFTSAQLKELERVFAE-THYPDIYTREELALKI----DLTEARVQVWFQNRRAKFR 146
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVE 196
+++ +S+ G G AGA G A E
Sbjct: 147 KQERAASA-----KGTAGTAGAKKGEARCSSE 173
>gi|324521156|gb|ADY47792.1| Homeobox protein ceh-30 [Ascaris suum]
Length = 294
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 27/106 (25%)
Query: 66 VEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQG 125
VE H+S+++ Q A+ G K + + R T QLQ LE+ FD
Sbjct: 79 VESHRSVTSPQSSASCG------------------KKARKARTIFTDKQLQELEATFD-- 118
Query: 126 TGTPSKQKIKEI--TVELSQHGQISETNVYNWFQNRRARSKRKQLV 169
KQK + ++L+Q +S+T V W+QNRR + KR+ V
Sbjct: 119 -----KQKYLSVQDRMDLAQRMGLSDTQVKTWYQNRRTKWKRQAAV 159
>gi|24663292|ref|NP_524042.2| eyegone, isoform A [Drosophila melanogaster]
gi|62472161|ref|NP_001014582.1| eyegone, isoform B [Drosophila melanogaster]
gi|23093607|gb|AAF49918.2| eyegone, isoform A [Drosophila melanogaster]
gi|61678464|gb|AAX52747.1| eyegone, isoform B [Drosophila melanogaster]
Length = 670
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 350 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 404
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 405 RHQRMNLLKRQRSSPANPLHS 425
>gi|242020400|ref|XP_002430643.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212515815|gb|EEB17905.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 270
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
G K R R T T +QL LE +F++ T P ++E EL++ +SE V WFQ
Sbjct: 81 GKMKKPRRNRTTFTTIQLSALERVFEK-THYP-DAFVRE---ELAKRVGLSEARVQVWFQ 135
Query: 158 NRRARSKR--KQLVSSS 172
NRRA+ +R + L+S S
Sbjct: 136 NRRAKFRRNERSLISHS 152
>gi|198464867|ref|XP_001353394.2| GA10346 [Drosophila pseudoobscura pseudoobscura]
gi|198149915|gb|EAL30901.2| GA10346 [Drosophila pseudoobscura pseudoobscura]
Length = 647
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 331 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 385
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 386 RHQRMNLLKRQRSSPANPLHS 406
>gi|195327129|ref|XP_002030274.1| GM24656 [Drosophila sechellia]
gi|194119217|gb|EDW41260.1| GM24656 [Drosophila sechellia]
Length = 669
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 350 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 404
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 405 RHQRMNLLKRQRSSPANPLHS 425
>gi|21260588|gb|AAM43805.1| eyegone [Drosophila melanogaster]
Length = 670
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 350 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 404
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 405 RHQRMNLLKRQRSSPANPLHS 425
>gi|443703131|gb|ELU00842.1| hypothetical protein CAPTEDRAFT_171492 [Capitella teleta]
Length = 195
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 91 DPLMTSGGGHKISA---------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVEL 141
+P ++ GGG S R R T QL LE +F++ T P ++E EL
Sbjct: 11 EPPLSVGGGVTPSTVCKKKQKQRRNRTTFNSQQLAALERVFER-THYPDA-FVRE---EL 65
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
++ +SE V WFQNRRA+ +R + + + G GG GA
Sbjct: 66 ARRVNLSEARVQVWFQNRRAKFRRNERNVLAQRSTMYGSGGAVGA 110
>gi|194869847|ref|XP_001972533.1| GG13831 [Drosophila erecta]
gi|190654316|gb|EDV51559.1| GG13831 [Drosophila erecta]
Length = 670
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 350 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 404
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 405 RHQRMNLLKRQRSSPANPLHS 425
>gi|313228402|emb|CBY23553.1| unnamed protein product [Oikopleura dioica]
Length = 280
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T Q+ LES+F+Q T P ++E ELSQ+ +SE V WFQNRRA+S+
Sbjct: 87 RSRTNFTMEQIHALESLFEQ-THYPDA-FMRE---ELSQNLGLSEARVQVWFQNRRAKSR 141
Query: 165 RKQLVSSSANTL 176
+++ +++ +L
Sbjct: 142 KQESCEATSASL 153
>gi|345498243|ref|XP_001606522.2| PREDICTED: hypothetical protein LOC100122913 [Nasonia vitripennis]
Length = 422
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
GG+ R R T QL LE +FD+ T P + ELSQ +SE V WFQ
Sbjct: 228 GGNGKQRRSRTNFTLEQLAELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQ 282
Query: 158 NRRARSKRKQLVSSSANTLHNGGGGG 183
NRRA+ ++ + + LH G GG
Sbjct: 283 NRRAKCRKHE------SQLHKGVTGG 302
>gi|5502|emb|CAA44264.1| YOX 1 [Saccharomyces cerevisiae]
Length = 296
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|340721873|ref|XP_003399338.1| PREDICTED: homeobox protein aristaless-like 4-like [Bombus
terrestris]
Length = 268
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|391338734|ref|XP_003743710.1| PREDICTED: uncharacterized protein LOC100900686 [Metaseiulus
occidentalis]
Length = 854
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 15/68 (22%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV-----ELSQHGQISETNVYNWFQNR 159
R R T T QL +LES+F KIK+ V +L+Q +SE + WFQNR
Sbjct: 722 RLRTTFTKEQLDMLESVF----------KIKQYVVGKERTQLAQQLNLSENQIKVWFQNR 771
Query: 160 RARSKRKQ 167
R + K+++
Sbjct: 772 RTKHKKEE 779
>gi|194747105|ref|XP_001955993.1| GF24979 [Drosophila ananassae]
gi|190623275|gb|EDV38799.1| GF24979 [Drosophila ananassae]
Length = 670
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 352 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 406
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 407 RHQRMNLLKRQRSSPANPLHS 427
>gi|325516453|gb|ADZ24785.1| Otx [Terebratalia transversa]
Length = 270
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P M G + R+R T + QL ILE++F Q T P +E+ ++++ + E+
Sbjct: 39 PAMGYQGNPRKQRRERTTFSRAQLDILEALF-QKTRYPDIFMREEVALKIN----LPESR 93
Query: 152 VYNWFQNRRARSKRKQ 167
V WF+NRRA+ +++Q
Sbjct: 94 VQVWFKNRRAKCRQQQ 109
>gi|440901038|gb|ELR52042.1| Homeobox protein Nkx-6.3, partial [Bos grunniens mutus]
Length = 241
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 82 GGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQI--LESIFDQGTGTPSKQKIKEITV 139
GGR DPL G I ++ PT QI LE F+Q +K
Sbjct: 99 GGRQCGSTPDPL-----GDSIHKKKHTRPTFTGHQIFALEKTFEQ-----TKYLAGPERA 148
Query: 140 ELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEV 199
L+ ++E+ V WFQNRR + ++K + S++T G AGAGG + ETE
Sbjct: 149 RLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSSSTPRAPG----SAGAGGERAASETED 204
Query: 200 D 200
D
Sbjct: 205 D 205
>gi|115647030|ref|XP_781057.2| PREDICTED: uncharacterized protein LOC575572 [Strongylocentrotus
purpuratus]
Length = 446
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE FD T P +E+ + L +SE+ V WFQNRRA+ +
Sbjct: 200 RSRTTFTTFQLHQLERAFDM-TQYPDVFMREELALRL----DLSESRVQVWFQNRRAKWR 254
Query: 165 RKQLVSSSANTLHNGGGG 182
+K+ + + GG G
Sbjct: 255 KKEKLFDRKSPCSFGGFG 272
>gi|345486353|ref|XP_003425457.1| PREDICTED: hypothetical protein LOC100678407 [Nasonia vitripennis]
Length = 286
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|350412866|ref|XP_003489794.1| PREDICTED: homeobox protein aristaless-like 4-like isoform 1
[Bombus impatiens]
Length = 268
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES F Q T P +++ ++++ ++E V WFQNRRA+ +
Sbjct: 54 RNRTTFTLQQLEELESAFAQ-THYPDVFTREDLAMKIN----LTEARVQVWFQNRRAKWR 108
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTT 211
+ + + GGGGA G A + S HD TT
Sbjct: 109 KSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTT 155
>gi|350412869|ref|XP_003489795.1| PREDICTED: homeobox protein aristaless-like 4-like isoform 2
[Bombus impatiens]
Length = 254
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|60678223|gb|AAX33618.1| AT09010p [Drosophila melanogaster]
Length = 675
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 355 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 409
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 410 RHQRMNLLKRQRSSPANPLHS 430
>gi|443916290|gb|ELU37413.1| homeodomain transcription factor [Rhizoctonia solani AG-1 IA]
Length = 868
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
T+ + R+R TP QL LE +F Q +P+ + KEI+ +L + E
Sbjct: 30 TASARANLQKRKRSRVTPEQLAHLERVFSQDR-SPTAARRKEISEQLG----MQERQTQI 84
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVET 197
WFQNRRA++K LV S G G G+ G D+ +T
Sbjct: 85 WFQNRRAKAK---LVES------KGRSGRPGSPGSGRDTPPDT 118
>gi|3659897|gb|AAC78330.1| Eyegone [Drosophila melanogaster]
Length = 523
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 234 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 288
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 289 RHQRMNLLKRQRSSPANPLHS 309
>gi|18858805|ref|NP_571424.1| hesx homeobox 1 [Danio rerio]
gi|1762767|gb|AAB88392.1| homeodomain-containing protein [Danio rerio]
Length = 161
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
I R R + VQ++ILES+F Q P +I EL++ Q+ E + WFQNRRA
Sbjct: 79 IGRRPRTAFSSVQIKILESVF-QVNSYPGI----DIREELAKKLQLDEDRIQIWFQNRRA 133
Query: 162 RSKR 165
+ KR
Sbjct: 134 KLKR 137
>gi|268562122|ref|XP_002638503.1| C. briggsae CBR-TTX-1 protein [Caenorhabditis briggsae]
Length = 367
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 15/82 (18%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R+R T T QL+ILES F K + +I + +++ Q+ E+ V WF+NRRA+
Sbjct: 176 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 228
Query: 163 SKRKQLVSSSANTLHNGGGGGA 184
+++++ T+ G GG A
Sbjct: 229 ARQQK------KTMQPGSGGSA 244
>gi|56694802|gb|AAW23063.1| Shox, partial [Oikopleura dioica]
Length = 249
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T Q+ LES+F+Q T P ++E ELSQ+ +SE V WFQNRRA+S+
Sbjct: 56 RSRTNFTMEQIHALESLFEQ-THYPDA-FMRE---ELSQNLGLSEARVQVWFQNRRAKSR 110
Query: 165 RKQLVSSSANTL 176
+++ +++ +L
Sbjct: 111 KQESCEATSASL 122
>gi|328779849|ref|XP_001120883.2| PREDICTED: homeobox protein aristaless-like 4-like [Apis mellifera]
Length = 265
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|194859821|ref|XP_001969458.1| GG23943 [Drosophila erecta]
gi|190661325|gb|EDV58517.1| GG23943 [Drosophila erecta]
Length = 419
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 89 YCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
+CDPL +S K R R T QL LE +F++ T P ++E ELSQ +S
Sbjct: 179 HCDPLDSSLVNTK-QRRSRTNFTLDQLNELERLFEE-THYP-DAFMRE---ELSQRLGLS 232
Query: 149 ETNVYNWFQNRRARSKRKQLVSSSANTLHNG 179
E V WFQNRRA+ ++ + N +H G
Sbjct: 233 EARVQVWFQNRRAKCRKHE------NQMHKG 257
>gi|15004982|dbj|BAB62172.1| transcriptional factor [Leucopsarion petersii]
Length = 331
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
QL ILES+F + T P +E+ ++++ + E+ V WF+NRRA+ +++Q S+SA
Sbjct: 48 QLDILESLFAK-TRYPDIFMREEVALKIN----LPESRVXVWFKNRRAKCRQQQQSSNSA 102
Query: 174 N 174
N
Sbjct: 103 N 103
>gi|405962470|gb|EKC28141.1| Homeobox protein otx5-B [Crassostrea gigas]
Length = 320
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL ILES+F Q T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 112 RERTTFTRAQLDILESLF-QKTRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 166
Query: 165 RKQ 167
++Q
Sbjct: 167 QQQ 169
>gi|380011058|ref|XP_003689630.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis florea]
Length = 266
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|213624006|gb|AAI70518.1| Unknown (protein for MGC:197245) [Xenopus laevis]
gi|213625396|gb|AAI70520.1| Unknown (protein for MGC:197247) [Xenopus laevis]
Length = 335
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 60 TICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILE 119
T C V KS++ +L G + CD ++S R R T T +QL+ LE
Sbjct: 107 TCCSLAVSPGKSMADKVELDELGDK-----CDSNVSSSKKR----RHRTTFTSLQLEELE 157
Query: 120 SIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+F Q T P ++E +L+ +++E V WFQNRRA+ ++++
Sbjct: 158 KVF-QKTHYPDVY-VRE---QLALRTELTEARVQVWFQNRRAKWRKRE 200
>gi|195493839|ref|XP_002094585.1| GE20121 [Drosophila yakuba]
gi|194180686|gb|EDW94297.1| GE20121 [Drosophila yakuba]
Length = 680
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 354 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 408
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN LH+
Sbjct: 409 RHQRMNLLKRQRSSPANPLHS 429
>gi|410909872|ref|XP_003968414.1| PREDICTED: short stature homeobox protein 2-like isoform 2
[Takifugu rubripes]
Length = 301
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 112 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 166
Query: 165 RKQLVSSSANTLHNGGGGGAG 185
+++ N LH G GA
Sbjct: 167 KQE------NQLHKGVLIGAA 181
>gi|301615106|ref|XP_002937019.1| PREDICTED: short stature homeobox protein-like [Xenopus (Silurana)
tropicalis]
Length = 290
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 117 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 171
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G G+
Sbjct: 172 KQE------NQMHKGVILGTGS 187
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 145 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 199
Query: 165 RKQLVSSSANTLHN 178
R++ + +SA LH+
Sbjct: 200 RQEKMDASAMKLHD 213
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES F Q T P +++ ++++ ++E V WFQNRRA+ +
Sbjct: 191 RNRTTFTLQQLEELESAFAQ-THYPDVFTREDLAMKIN----LTEARVQVWFQNRRAKWR 245
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTT 211
+ + + GGGGA G A + S HD TT
Sbjct: 246 KSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTT 292
>gi|213417929|ref|NP_033142.2| paired mesoderm homeobox protein 2 [Mus musculus]
gi|223460240|gb|AAI37873.1| Paired related homeobox 2 [Mus musculus]
gi|223460633|gb|AAI37875.1| Paired related homeobox 2 [Mus musculus]
Length = 247
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 109 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 163
Query: 171 SSANTLHNGG 180
SA+ L + G
Sbjct: 164 RSASLLKSYG 173
>gi|195376711|ref|XP_002047136.1| GJ13265 [Drosophila virilis]
gi|194154294|gb|EDW69478.1| GJ13265 [Drosophila virilis]
Length = 719
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 301 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 355
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN +H+
Sbjct: 356 RHQRMNLLKRQRSSPANPIHS 376
>gi|6174918|sp|Q06348.2|PRRX2_MOUSE RecName: Full=Paired mesoderm homeobox protein 2; Short=PRX-2;
AltName: Full=Homeobox protein S8
gi|2950237|emb|CAA37055.1| Prx2 [Mus musculus]
Length = 247
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 109 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 163
Query: 171 SSANTLHNGG 180
SA+ L + G
Sbjct: 164 RSASLLKSYG 173
>gi|157787036|ref|NP_001099209.1| paired mesoderm homeobox protein 2 [Rattus norvegicus]
gi|149039069|gb|EDL93289.1| paired related homeobox 2 (predicted) [Rattus norvegicus]
Length = 248
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 110 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 164
Query: 171 SSANTLHNGG 180
SA+ L + G
Sbjct: 165 RSASLLKSYG 174
>gi|71043898|ref|NP_001020793.1| short stature homeobox protein [Canis lupus familiaris]
gi|66876514|gb|AAY58046.1| short stature homeobox isoform a [Canis lupus familiaris]
Length = 291
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V+ WFQNRRA+ +
Sbjct: 118 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVHVWFQNRRAKCR 172
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 173 KQE------NQMHKG 181
>gi|410909870|ref|XP_003968413.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Takifugu rubripes]
Length = 289
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 112 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 166
Query: 165 RKQLVSSSANTLHNGGGGGAG 185
+++ N LH G GA
Sbjct: 167 KQE------NQLHKGVLIGAA 181
>gi|383855091|ref|XP_003703052.1| PREDICTED: homeobox protein aristaless-like 4-like [Megachile
rotundata]
Length = 267
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK---RKQ 167
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ + R Q
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQARLQ 88
Query: 168 LVSSSANTLHNGGGGGA 184
L+ + G G A
Sbjct: 89 LLQDAWRMRCLGLGSAA 105
>gi|7706659|ref|NP_057391.1| paired mesoderm homeobox protein 2 [Homo sapiens]
gi|109110036|ref|XP_001107634.1| PREDICTED: paired mesoderm homeobox protein 2 [Macaca mulatta]
gi|114627151|ref|XP_520310.2| PREDICTED: paired mesoderm homeobox protein 2 [Pan troglodytes]
gi|12644475|sp|Q99811.2|PRRX2_HUMAN RecName: Full=Paired mesoderm homeobox protein 2; AltName:
Full=Paired-related homeobox protein 2; Short=PRX-2
gi|6578131|gb|AAF17708.1|AF061970_1 paired related homeobox protein [Homo sapiens]
gi|15779165|gb|AAH14645.1| Paired related homeobox 2 [Homo sapiens]
gi|119608307|gb|EAW87901.1| paired related homeobox 2 [Homo sapiens]
gi|410211692|gb|JAA03065.1| paired related homeobox 2 [Pan troglodytes]
gi|410254442|gb|JAA15188.1| paired related homeobox 2 [Pan troglodytes]
gi|410307870|gb|JAA32535.1| paired related homeobox 2 [Pan troglodytes]
gi|410352553|gb|JAA42880.1| paired related homeobox 2 [Pan troglodytes]
Length = 253
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 115 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 169
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 170 RSASLLKS 177
>gi|413922429|gb|AFW62361.1| hypothetical protein ZEAMMB73_916992 [Zea mays]
Length = 378
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ 146
+ RW P P Q++ILE+IF+ G P +++I I + L ++ Q
Sbjct: 17 KPRWNPRPEQIRILEAIFNSGMVNPPREEIPRIRMRLQEYDQ 58
>gi|91091010|ref|XP_975015.1| PREDICTED: similar to Homeobox protein bagpipe (NK-3) [Tribolium
castaneum]
gi|270014047|gb|EFA10495.1| hypothetical protein TcasGA2_TC012743 [Tribolium castaneum]
Length = 279
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 63 EQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKIS-----ARQRWTPTPVQLQI 117
E+ ++M K+ + L+ L +C P + G + S R R T Q+
Sbjct: 64 EKALDMSKASKTQEPLSGIAS-LSPDFCPPSQSEESGREPSQPGRKKRSRAAFTHAQVFE 122
Query: 118 LESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
LE F Q ++ +L+Q +++ET V W+QNRR ++KRKQL
Sbjct: 123 LERRFSQQRYLSGPER-----ADLAQALKLTETQVKIWYQNRRYKTKRKQL 168
>gi|395528272|ref|XP_003766254.1| PREDICTED: short stature homeobox protein 2, partial [Sarcophilus
harrisii]
Length = 269
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 93 LMTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
+M G KI R+ R T QL LE +FD+ T P + ELSQ +SE
Sbjct: 49 VMEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEAR 103
Query: 152 VYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
V WFQNRRA+ ++++ N LH G GA +
Sbjct: 104 VQVWFQNRRAKCRKQE------NQLHKGVLIGAAS 132
>gi|323347094|gb|EGA81369.1| Yox1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 359
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|308220088|gb|ADO22616.1| homeobox transcription factor HD07b [Mnemiopsis leidyi]
gi|308220176|gb|ADO22660.1| homeobox transcription factor HD07a [Mnemiopsis leidyi]
Length = 342
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
T QL+ LE F Q +++ ELS +SET + WFQNRRAR +R + +
Sbjct: 186 TATQLEFLEDRFRQNPKIDRDERM-----ELSLQIGVSETAIRTWFQNRRARQRRTETLK 240
Query: 171 SSANTLHNGG 180
A G
Sbjct: 241 KQAEQAAETG 250
>gi|170029663|ref|XP_001842711.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864030|gb|EDS27413.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 241
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE 140
AG L + D L G + R R T TP QLQ LE++F Q T P +E+ +
Sbjct: 2 AGPFLSPLPGDLLTEYMFGRRRQRRNRTTFTPQQLQELETLF-QKTHYPDVFLREEVALR 60
Query: 141 LSQHGQISETNVYNWFQNRRARSKRK 166
+S +SE V WFQNRRA+ +++
Sbjct: 61 IS----LSEARVQVWFQNRRAKWRKQ 82
>gi|158634542|gb|ABW76121.1| MsxA [Petromyzon marinus]
Length = 318
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK S + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 189 HKASRKPRTPFTTSQLLALERKFRQ------KQYLSIAERAEFSNSLNLTETQVKIWFQN 242
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 243 RRAKAKRLQ 251
>gi|355559914|gb|EHH16642.1| hypothetical protein EGK_11961 [Macaca mulatta]
Length = 367
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 176 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 230
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 231 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 258
>gi|349580258|dbj|GAA25418.1| K7_Yox1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 385
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|324514669|gb|ADY45945.1| Paired box protein Pax-7 [Ascaris suum]
Length = 346
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C+PLM K + R R + T QL ILE+ F T P +++ + I + ++SE
Sbjct: 218 CEPLM------KKARRNRTSFTSEQLDILENAFRANT-YPDQEERERI----ATTTRLSE 266
Query: 150 TNVYNWFQNRRARSKRKQLVSSS 172
+ WF NRRAR ++ +S S
Sbjct: 267 EKIMTWFSNRRARCRKNFAISPS 289
>gi|340714415|ref|XP_003395724.1| PREDICTED: short stature homeobox protein 2-like [Bombus
terrestris]
Length = 384
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
SG G+ R R T QL LE +FD+ T P ++E ELSQ +SE V W
Sbjct: 183 SGNGNGKQRRSRTNFTLEQLAELERLFDE-THYPDA-FMRE---ELSQRLGLSEARVQVW 237
Query: 156 FQNRRARSKR--KQLVSSSANTLHNGGGGG 183
FQNRRA+ ++ QL A T G GG
Sbjct: 238 FQNRRAKCRKHESQLHKGLAITKRFGVAGG 267
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES F Q T P +++ ++++ ++E V WFQNRRA+ +
Sbjct: 241 RNRTTFTLQQLEELESAFAQ-THYPDVFTREDLAMKIN----LTEARVQVWFQNRRAKWR 295
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTT 211
+ + + GGGGA G A + S HD TT
Sbjct: 296 KSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTT 342
>gi|12860398|dbj|BAB31942.1| unnamed protein product [Mus musculus]
Length = 175
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 37 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 91
Query: 171 SSANTLHNGGGGGA 184
SA+ L + G A
Sbjct: 92 RSASLLKSYGQEAA 105
>gi|392297555|gb|EIW08655.1| Yox1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 385
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|327288472|ref|XP_003228950.1| PREDICTED: homeobox protein Nkx-3.1-like [Anolis carolinensis]
Length = 147
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L++H +++ET V WFQNRR ++KRKQL S
Sbjct: 69 LARHLKLTETQVKIWFQNRRYKTKRKQLAS 98
>gi|323336202|gb|EGA77473.1| Yox1p [Saccharomyces cerevisiae Vin13]
Length = 385
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|34393689|dbj|BAC83419.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50508866|dbj|BAD31643.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 125
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+S G ++S ++ T Q++ LES+F++ T Q+ V+L++ + E V
Sbjct: 43 SSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQR-----VQLAKKLGMEERQVKF 97
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGG 180
WFQNRR R K V ++ NGG
Sbjct: 98 WFQNRRTRKKVATWVDKIQLSVRNGG 123
>gi|270008516|gb|EFA04964.1| hypothetical protein TcasGA2_TC015038 [Tribolium castaneum]
Length = 151
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQ 157
H ++ ++R TP Q+ +LES F + ++ EL++ +SE V WFQ
Sbjct: 17 AHHILTPKKRLKYTPEQISLLESAFAENAYILGNRR-----KELAKSTALSERQVTFWFQ 71
Query: 158 NRRARSKRK 166
NRR++ +R+
Sbjct: 72 NRRSKMRRE 80
>gi|20975764|gb|AAM33144.1|AF440098_1 orthodenticle [Patella vulgata]
Length = 287
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LES+F Q T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 62 RERTTFTRAQLDVLESLF-QKTRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 116
Query: 165 RKQ 167
++Q
Sbjct: 117 QQQ 119
>gi|6323614|ref|NP_013685.1| Yox1p [Saccharomyces cerevisiae S288c]
gi|1730880|sp|P34161.2|YOX1_YEAST RecName: Full=Homeobox protein YOX1
gi|575692|emb|CAA86628.1| YOX1 [Saccharomyces cerevisiae]
gi|51013651|gb|AAT93119.1| YML027W [Saccharomyces cerevisiae]
gi|151946134|gb|EDN64365.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408213|gb|EDV11478.1| homeobox protein YOX1 [Saccharomyces cerevisiae RM11-1a]
gi|207342492|gb|EDZ70245.1| YML027Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270878|gb|EEU06016.1| Yox1p [Saccharomyces cerevisiae JAY291]
gi|259148548|emb|CAY81793.1| Yox1p [Saccharomyces cerevisiae EC1118]
gi|285813976|tpg|DAA09871.1| TPA: Yox1p [Saccharomyces cerevisiae S288c]
gi|323332279|gb|EGA73689.1| Yox1p [Saccharomyces cerevisiae AWRI796]
gi|323352990|gb|EGA85290.1| Yox1p [Saccharomyces cerevisiae VL3]
gi|365763712|gb|EHN05238.1| Yox1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 385
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 229
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 230 AVKRQRIATSKSTTI 244
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 87 NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQ 146
+ Y P G + R R T T QL LE F + T P +E+ ++
Sbjct: 218 DCYGGPPSAGGTNKRKQRRYRTTFTSYQLDELEKAFGR-THYPDVFTREELASKIG---- 272
Query: 147 ISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGG 181
++E + WFQNRRA+ ++++ V A+ GGG
Sbjct: 273 LTEARIQVWFQNRRAKWRKQEKVGPQAHPYSGGGG 307
>gi|443696883|gb|ELT97498.1| hypothetical protein CAPTEDRAFT_171001 [Capitella teleta]
Length = 351
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
+G K RQR T QLQ LE+ F + ++ E+S ++E V W
Sbjct: 117 AGADGKRQRRQRTHFTSQQLQELEATFQR-----NRYPDMATREEISAWTNLTEPRVRVW 171
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPEN 215
F+NRRA+ ++K+ + TL G G DS + S D K P
Sbjct: 172 FKNRRAKWRKKE---RNMETLKTGFGPQFNGFMQPFDSGLYAGYSSYNQWDHAKIPGP-- 226
Query: 216 LSSAHSTSQPQHLRNLPPTPRPRDDDDPMCFHTPADISSSQL 257
S S P L ++ P P + MCF +P +S +
Sbjct: 227 ---LASKSFPWGLNSVNPLPNVVSNPSGMCFSSPTSAGTSSM 265
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 60 TICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILE 119
T C V KS++ +L G + CD ++S R R T T +QL+ LE
Sbjct: 107 TCCSLAVSPGKSMADKVELDELGDK-----CDSNVSSSKKR----RHRTTFTSLQLEELE 157
Query: 120 SIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
+F Q T P ++E +L+ +++E V WFQNRRA+ ++++
Sbjct: 158 KVF-QKTHYPDVY-VRE---QLALRTELTEARVQVWFQNRRAKWRKRE 200
>gi|307200202|gb|EFN80496.1| ALX homeobox protein 1 [Harpegnathos saltator]
Length = 268
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 34 TPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 84
>gi|313221602|emb|CBY36091.1| unnamed protein product [Oikopleura dioica]
Length = 249
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T Q+ LES+F+Q T P ++E ELSQ+ +SE V WFQNRRA+S+
Sbjct: 87 RSRTNFTMEQIHALESLFEQ-THYPDA-FMRE---ELSQNLGLSEARVQVWFQNRRAKSR 141
Query: 165 RKQLVSSSANTL 176
+++ +++ +L
Sbjct: 142 KQESCEATSASL 153
>gi|148676546|gb|EDL08493.1| paired related homeobox 2 [Mus musculus]
Length = 240
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 102 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 156
Query: 171 SSANTLHNGG 180
SA+ L + G
Sbjct: 157 RSASLLKSYG 166
>gi|449488195|ref|XP_004175811.1| PREDICTED: homeobox protein Nkx-3.1-like [Taeniopygia guttata]
Length = 127
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L++H Q++ET V WFQNRR ++KRKQ V+
Sbjct: 56 LARHLQLTETQVKIWFQNRRYKTKRKQAVA 85
>gi|195163231|ref|XP_002022455.1| GL13041 [Drosophila persimilis]
gi|194104447|gb|EDW26490.1| GL13041 [Drosophila persimilis]
Length = 264
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|449270881|gb|EMC81529.1| Homeobox protein Nkx-6.3 [Columba livia]
Length = 261
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
Q+ LE F+Q +K L+ ++E+ V WFQNRR + ++K + S+
Sbjct: 151 QIFALEKTFEQ-----TKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSS 205
Query: 174 NTLHNGGGGGAGAGAGGADSEVETEVD 200
++ GG GG A + D E +D
Sbjct: 206 SSQRAGGSGGERAASEAEDDEYNKPLD 232
>gi|443729071|gb|ELU15123.1| hypothetical protein CAPTEDRAFT_25827, partial [Capitella teleta]
Length = 198
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 68 MHKSLSA-HQDLAAAGGRLGNIYCDPLMTSGG---GHKISA---------RQRWTPTPVQ 114
MH + + H L AGG+ G + L+ G G + SA R R +P Q
Sbjct: 52 MHPAAAGTHGPLGPAGGKDGAPFYSWLLARHGNFLGQRFSAYLFPFRKPKRIRTAFSPSQ 111
Query: 115 LQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
L LE F++ +++ KE+ L+ ++ET V WFQNRR + KR
Sbjct: 112 LLQLEHAFEKNHYVVGQER-KELAASLN----LTETQVKVWFQNRRTKHKR 157
>gi|348526714|ref|XP_003450864.1| PREDICTED: short stature homeobox protein 2-like isoform 2
[Oreochromis niloticus]
Length = 301
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 112 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 166
Query: 165 RKQLVSSSANTLHNGGGGGAG 185
+++ N LH G GA
Sbjct: 167 KQE------NQLHKGVLIGAA 181
>gi|323307836|gb|EGA61098.1| Yox1p [Saccharomyces cerevisiae FostersO]
Length = 305
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F++ PSK+K +EL++ ++E V WFQN+R
Sbjct: 95 LARRKRRRTSSQELSILQAEFEKCPA-PSKEK----RIELAESCHMTEKAVQIWFQNKRQ 149
Query: 162 RSKRKQLVSSSANTL 176
KR+++ +S + T+
Sbjct: 150 AVKRQRIATSKSTTI 164
>gi|313247123|emb|CBY35948.1| unnamed protein product [Oikopleura dioica]
Length = 187
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
Q+ LES+F+Q T P ++E ELSQ+ +SE V WFQNRRA+S++++ +++
Sbjct: 3 QIHALESLFEQ-THYPDA-FMRE---ELSQNLGLSEARVQVWFQNRRAKSRKQESCEATS 57
Query: 174 NTL 176
+L
Sbjct: 58 ASL 60
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES F Q T P +++ ++++ ++E V WFQNRRA+ +
Sbjct: 239 RNRTTFTLQQLEELESAFAQ-THYPDVFTREDLAMKIN----LTEARVQVWFQNRRAKWR 293
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTT 211
+ + + GGGGA G A + S HD TT
Sbjct: 294 KSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTT 340
>gi|432865290|ref|XP_004070510.1| PREDICTED: homeobox protein Hox-C13a-like [Oryzias latipes]
gi|74267575|dbj|BAE44286.1| hoxC13a [Oryzias latipes]
gi|83016971|dbj|BAE53494.1| hoxC13a [Oryzias latipes]
Length = 306
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 47/174 (27%)
Query: 42 VMTDEQLETLRKQIAVYATICEQL--------VEMHKSLSAH--------------QDLA 79
+ E+L + K+ A Y + V + S+SAH Q A
Sbjct: 135 ALPSEELSSRAKEFAFYPSFASSYQAVPGYLDVSVVPSISAHPEPRHDALIPMEGYQHWA 194
Query: 80 AAGGRLGNIYCD------------------PLMTSGGGHKISARQRWTPTPVQLQILESI 121
+ G G +YC PL ++ ++R T +QL+ LE
Sbjct: 195 LSNGWDGQVYCSKEQTQSTHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKIQLKELEKE 254
Query: 122 FDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANT 175
+ SK K+ +S +SE V WFQNRR K K+ VS S NT
Sbjct: 255 YAA-----SKFITKDKRRRISAATNLSERQVTIWFQNRRV--KEKKFVSKSKNT 301
>gi|229359367|emb|CAT03219.1| putative wuschel-related homeobox 9 protein [Nymphaea jamesoniana]
Length = 41
Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q++ILE+IF+ G P + +I++I +L ++GQ+ + NV+
Sbjct: 1 QIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVF 40
>gi|189303835|gb|ACD85821.1| paired-like homeobox Prd1 [Mnemiopsis leidyi]
Length = 358
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P + K+ R R T T QL+ LE F Q T P +EI L Q++E
Sbjct: 171 PFSSIKSKSKLQRRNRITFTAAQLEGLEKSF-QETHYPDVFGREEIAYSL----QLTEQR 225
Query: 152 VYNWFQNRRARSKRKQLVS 170
V WFQNRRA+ +++Q +S
Sbjct: 226 VQVWFQNRRAKWRKRQKLS 244
>gi|348526712|ref|XP_003450863.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Oreochromis niloticus]
Length = 289
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 112 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 166
Query: 165 RKQLVSSSANTLHNGGGGGAG 185
+++ N LH G GA
Sbjct: 167 KQE------NQLHKGVLIGAA 181
>gi|338720332|ref|XP_001499709.3| PREDICTED: paired mesoderm homeobox protein 2-like [Equus caballus]
Length = 297
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 159 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 213
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 214 RSASLLKS 221
>gi|110754946|ref|XP_001120105.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis mellifera]
Length = 231
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C+ TS + R R T + QL LE +F++ T P +E+ +S +SE
Sbjct: 43 CNETSTSASACRRPRRSRTTFSAEQLAALERVFER-THYPDAFVREELATRVS----LSE 97
Query: 150 TNVYNWFQNRRARSKRKQLVSS 171
V WFQNRRA+ +R + S+
Sbjct: 98 ARVQVWFQNRRAKFRRNERSSA 119
>gi|426363315|ref|XP_004048788.1| PREDICTED: paired mesoderm homeobox protein 2 [Gorilla gorilla
gorilla]
Length = 269
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 131 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 185
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 186 RSASLLKS 193
>gi|403298582|ref|XP_003940094.1| PREDICTED: paired mesoderm homeobox protein 2 [Saimiri boliviensis
boliviensis]
Length = 275
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 137 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 191
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 192 RSASLLKS 199
>gi|383863721|ref|XP_003707328.1| PREDICTED: short stature homeobox protein-like [Megachile
rotundata]
Length = 374
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 188 RSRTNFTLEQLAELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 242
Query: 165 RKQLVSSSANTLHNGGGGG 183
+ + + LH G GG
Sbjct: 243 KHE------SQLHKGVAGG 255
>gi|397503808|ref|XP_003822510.1| PREDICTED: paired mesoderm homeobox protein 2 [Pan paniscus]
Length = 188
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 50 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 104
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 105 RSASLLKS 112
>gi|332022452|gb|EGI62760.1| Paired mesoderm homeobox protein 2 [Acromyrmex echinatior]
Length = 249
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+S G++ R R T + QL LE +F++ T P +E+ +S +SE V
Sbjct: 48 SSTAGNRRPRRSRTTFSAQQLAALERVFEK-THYPDAFVREELATRVS----LSEARVQV 102
Query: 155 WFQNRRARSKRKQLVSS 171
WFQNRRA+ +R + S+
Sbjct: 103 WFQNRRAKFRRNERSSA 119
>gi|344258469|gb|EGW14573.1| Paired mesoderm homeobox protein 2 [Cricetulus griseus]
Length = 185
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 47 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 101
Query: 171 SSANTLHNGGGGGA 184
SA+ L + G A
Sbjct: 102 RSASLLKSYGQEAA 115
>gi|198469287|ref|XP_001354978.2| GA10896 [Drosophila pseudoobscura pseudoobscura]
gi|198146800|gb|EAL32034.2| GA10896 [Drosophila pseudoobscura pseudoobscura]
Length = 264
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|449488199|ref|XP_004175812.1| PREDICTED: homeobox protein Nkx-3.1-like [Taeniopygia guttata]
Length = 133
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS 170
L++H Q++ET V WFQNRR ++KRKQ V+
Sbjct: 62 LARHLQLTETQVKIWFQNRRYKTKRKQAVA 91
>gi|410982500|ref|XP_003997594.1| PREDICTED: divergent paired-related homeobox [Felis catus]
Length = 194
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 93 LMTSGGGH-KISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
++T GG H K S R+R T QL+ LE +F Q P + KE+ ++L H + +
Sbjct: 9 VLTPGGKHQKHSHRKRTMFTEDQLEALEFLFSQNPYPPPSLQ-KEMALKLGIHPTVLQV- 66
Query: 152 VYNWFQNRRARSKRKQ 167
WF+N RA+ K+ Q
Sbjct: 67 ---WFKNHRAKLKKAQ 79
>gi|344271692|ref|XP_003407671.1| PREDICTED: paired mesoderm homeobox protein 2-like [Loxodonta
africana]
Length = 254
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 116 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 170
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 171 RSASLLKS 178
>gi|426219373|ref|XP_004003900.1| PREDICTED: short stature homeobox protein 2 [Ovis aries]
Length = 321
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 120 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 174
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 175 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 202
>gi|195393244|ref|XP_002055264.1| GJ19274 [Drosophila virilis]
gi|194149774|gb|EDW65465.1| GJ19274 [Drosophila virilis]
Length = 269
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ +++S + E V WFQNRRA+ +
Sbjct: 39 RNRTTFTTYQLHELEHAFER-SHYPDVYSREELAMKVS----LPEVRVQVWFQNRRAKWR 93
Query: 165 RKQLVSSSANTLHNG 179
R++ + SS + LH+
Sbjct: 94 RQEKLESSTSKLHDS 108
>gi|24640656|ref|NP_572500.1| CG11294, isoform A [Drosophila melanogaster]
gi|442615563|ref|NP_001259352.1| CG11294, isoform B [Drosophila melanogaster]
gi|7290965|gb|AAF46405.1| CG11294, isoform A [Drosophila melanogaster]
gi|66571256|gb|AAY51593.1| IP01065p [Drosophila melanogaster]
gi|440216555|gb|AGB95195.1| CG11294, isoform B [Drosophila melanogaster]
Length = 261
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|194890930|ref|XP_001977409.1| GG19028 [Drosophila erecta]
gi|190649058|gb|EDV46336.1| GG19028 [Drosophila erecta]
Length = 264
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|195126168|ref|XP_002007546.1| GI12327 [Drosophila mojavensis]
gi|193919155|gb|EDW18022.1| GI12327 [Drosophila mojavensis]
Length = 659
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL+ LE FD+ S LS +SE V WF NRRA+ +
Sbjct: 360 RNRTTFSPEQLEELEKEFDK-----SHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWR 414
Query: 165 RKQLV-------SSSANTLHN 178
R Q + SS AN +H+
Sbjct: 415 RHQRMNLLKRQRSSPANPIHS 435
>gi|307215496|gb|EFN90148.1| Paired mesoderm homeobox protein 2 [Harpegnathos saltator]
Length = 274
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+S G++ R R T + QL LE +F++ T P +E+ +S ++E V
Sbjct: 48 SSAAGNRRPRRSRTTFSAQQLAALERVFEK-THYPDAFVREELATRVS----LTEARVQV 102
Query: 155 WFQNRRARSKRKQLVSS 171
WFQNRRA+ +R + S+
Sbjct: 103 WFQNRRAKFRRNERSSA 119
>gi|1322001|emb|CAA66399.1| ZEN Tc [Tribolium castaneum]
Length = 251
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE F G ++I +++++ +SE + WFQNRR + K
Sbjct: 90 RARTAYTSAQLVELEREFHHGKYLSRPRRI-----QIAENLNLSERQIKIWFQNRRMKHK 144
Query: 165 RKQL------VSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLH 205
++Q+ SS A T + + A AD ++ VD LL H
Sbjct: 145 KEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQI---VDRLLSH 188
>gi|354493426|ref|XP_003508843.1| PREDICTED: short stature homeobox protein 2-like [Cricetulus
griseus]
Length = 219
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 32 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 86
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 87 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 114
>gi|328717151|ref|XP_003246132.1| PREDICTED: paired mesoderm homeobox protein 1-like [Acyrthosiphon
pisum]
Length = 244
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T + QL+ LE +F++ T P ++E EL++ +SE V WFQNRRA+ +
Sbjct: 48 RNRTTFSSCQLRALEKVFER-THYPDA-FVRE---ELARRVCLSEARVQVWFQNRRAKFR 102
Query: 165 RKQLVSSSAN 174
R + S S N
Sbjct: 103 RNERSSLSRN 112
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R R T T QL+ILE F+ K + ++ EL+Q +++E V WF NRRAR
Sbjct: 193 RSRTTFTAEQLEILERSFE-------KTQYPDVYTREELAQKARLTEARVQVWFSNRRAR 245
Query: 163 SKRKQLVSSSANTL 176
RK L S TL
Sbjct: 246 -LRKHLNSQQLATL 258
>gi|307176314|gb|EFN65933.1| ALX homeobox protein 1 [Camponotus floridanus]
Length = 240
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LES+F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 13 TFTPQQLQELESLF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 65
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
G K R R T T QL LE F++ + P +E+ +++ + E V WFQN
Sbjct: 133 GKKKHRRNRTTFTTYQLHELERAFEK-SHYPDVYSREELATKVN----LPEVRVQVWFQN 187
Query: 159 RRARSKRKQLVSSSANTLHN 178
RRA+ +R++ + +S LH+
Sbjct: 188 RRAKWRRQEKMDTSTMKLHD 207
>gi|322788141|gb|EFZ13923.1| hypothetical protein SINV_02746 [Solenopsis invicta]
Length = 401
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
++G G+ R R T QL LE +FD+ T P ++E ELSQ +SE V
Sbjct: 206 SNGSGNGKQRRSRTNFTIEQLAELERLFDE-THYPDA-FMRE---ELSQRLGLSEARVQV 260
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGGGG 182
WFQNRRA+ ++ + + LH G G
Sbjct: 261 WFQNRRAKCRKHE------SQLHKGVAG 282
>gi|308511805|ref|XP_003118085.1| CRE-CEH-31 protein [Caenorhabditis remanei]
gi|308238731|gb|EFO82683.1| CRE-CEH-31 protein [Caenorhabditis remanei]
Length = 266
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI--TVELSQHGQISETNVYNWF 156
G K + + R T QLQ LE+ F+ KQK + +EL+ +++T V W+
Sbjct: 95 GSKKARKARTIFTDKQLQELENTFE-------KQKYLSVQDRMELAHRMGLTDTQVKTWY 147
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGA 184
QNRR + KR+ S + LH+ G A
Sbjct: 148 QNRRTKWKRQ--ASVGMDLLHDAGNMAA 173
>gi|426335944|ref|XP_004029464.1| PREDICTED: homeobox protein EMX1 [Gorilla gorilla gorilla]
Length = 165
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 71 SLSAHQDLAAAGGRLG-NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTP 129
SLS +A GG ++ D L+ G + R R +P QL LE F++
Sbjct: 34 SLSVPACVAVGGGAAASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVV 93
Query: 130 SKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
++ K++ LS +SET V WFQNRR + KR++L
Sbjct: 94 GAER-KQLAGSLS----LSETQVKVWFQNRRTKYKRQKL 127
>gi|195130567|ref|XP_002009723.1| GI15515 [Drosophila mojavensis]
gi|193908173|gb|EDW07040.1| GI15515 [Drosophila mojavensis]
Length = 288
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|18026222|gb|AAL25812.1| posterior-2 homeodomain protein [Euprymna scolopes]
Length = 94
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 91 DPLMTSGGGHKISARQRWTP-TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
D L S G H+ R++ P T Q +LE+ F + ++QK EI+ +L Q++E
Sbjct: 5 DHLFDSQGSHETKGRKKRKPYTRYQTMVLENEF-LNSSYITRQKRWEISCKL----QLTE 59
Query: 150 TNVYNWFQNRRARSKRKQL 168
V WFQNRR KRK+L
Sbjct: 60 RQVKVWFQNRRM--KRKKL 76
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ +++S + E V WFQNRRA+ +
Sbjct: 38 RNRTTFTTYQLHELERAFER-SHYPDVYSREELAMKVS----LPEVRVQVWFQNRRAKWR 92
Query: 165 RKQLVSSSANTLHNG 179
R++ + +S++ LH+
Sbjct: 93 RQEKLETSSSKLHDS 107
>gi|184191097|gb|ACC76761.1| Hex [Amphimedon queenslandica]
Length = 236
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 98 GGHKISARQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
GG + +AR R++ Q+Q LE F +Q P+ +K+ L+ +SE V WF
Sbjct: 90 GGMRKAARMRFSQE--QIQTLEQRFQEQHYLLPADRKL------LAHSLGMSERQVKTWF 141
Query: 157 QNRRARSKRKQLVSS 171
QN+RA+ KR +++SS
Sbjct: 142 QNKRAQCKRSRILSS 156
>gi|449281669|gb|EMC88704.1| Homeobox protein OTX1, partial [Columba livia]
Length = 59
Score = 40.4 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL ILE++F + T P +E+ ++++ + E+ V WFQNRRA+ K
Sbjct: 4 RERTTFTRAQLDILEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFQNRRAKWK 58
Query: 165 R 165
R
Sbjct: 59 R 59
>gi|297685530|ref|XP_002820340.1| PREDICTED: paired mesoderm homeobox protein 2 [Pongo abelii]
Length = 190
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 52 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 106
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 107 RSASLLKS 114
>gi|390458435|ref|XP_002743439.2| PREDICTED: paired mesoderm homeobox protein 2 [Callithrix jacchus]
Length = 185
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 47 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 101
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 102 RSASLLKS 109
>gi|380025331|ref|XP_003696428.1| PREDICTED: retinal homeobox protein Rx2-like [Apis florea]
Length = 392
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 208 RSRTNFTLEQLAELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 262
Query: 165 RKQLVSSSANTLHNGGGGG 183
+ + + LH G GG
Sbjct: 263 KHE------SQLHKGVAGG 275
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LE F Q T P +EI +++ ++E V WFQNRRA+ +
Sbjct: 140 RIRTTFTSAQLKELERAF-QETHYPDIYTREEIAMKI----DLTEARVQVWFQNRRAKFR 194
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ ++ +T +G G +GA
Sbjct: 195 KQERLAQQKSTSQSGIGVDSGA 216
>gi|336364782|gb|EGN93136.1| hypothetical protein SERLA73DRAFT_78978 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389887|gb|EGO31030.1| hypothetical protein SERLADRAFT_432689 [Serpula lacrymans var.
lacrymans S7.9]
Length = 327
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 11/61 (18%)
Query: 112 PVQLQILESIFDQGTGTPSKQKI---KEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
P+QLQ+L+ +FD + ++++ EI +EL V NWFQN+R +KRK L
Sbjct: 51 PMQLQVLQRMFDVKSHPTREERLILANEIGMELKA--------VTNWFQNKRQTAKRKAL 102
Query: 169 V 169
V
Sbjct: 103 V 103
>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
Length = 220
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 33 VVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDP 92
V N + + +M D + + A+ ++ ++ + ++ + A +G+ D
Sbjct: 35 VANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDF 94
Query: 93 LMTSGGGHKISA-------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
+ S G +S R R T T QL LE IF + T P +EI +L
Sbjct: 95 HLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLE-THYPDIYTREEIASKL---- 149
Query: 146 QISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 150 HLTEARVQVWFQNRRAKFRKQE 171
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 139 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 193
Query: 165 RKQLVSSSANTLHN 178
R++ + +S LH+
Sbjct: 194 RQEKIDASTMKLHD 207
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 139 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 193
Query: 165 RKQLVSSSANTLHN 178
R++ + +S LH+
Sbjct: 194 RQEKIDASTMKLHD 207
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LE +F + T P +E+ +++ ++E V WFQNRRA+ +
Sbjct: 92 RIRTTFTSAQLKELERVFAE-THYPDIYTREELALKI----DLTEARVQVWFQNRRAKFR 146
Query: 165 RKQLVSSSANTLHNGGGGGAGAGAGGADSEVE 196
+++ +S+ G G GA G A E
Sbjct: 147 KQERAASA-----KGAAGTTGAKKGEARCSSE 173
>gi|303273110|ref|XP_003055916.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462000|gb|EEH59292.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 101 KISARQRWTPTPVQLQILESIFDQGTGT-PSKQKIKEITVELSQHGQIS-ETNVYNWFQN 158
K+ ++RW P QL+ LE + + ++ +I ELS+HG+ + ++ W N
Sbjct: 152 KLIKQKRWYPNKEQLRRLEFYYKHSRSSFKDREGRTQILAELSKHGETKGQAKLHTWSMN 211
Query: 159 RRARSKRK 166
RRA+ KR+
Sbjct: 212 RRAKEKRQ 219
>gi|49170108|ref|NP_990819.1| homeobox protein MSX-1 [Gallus gallus]
gi|1708273|sp|P50223.1|HMGX7_CHICK RecName: Full=Homeobox protein GHOX-7; AltName: Full=CHOX-7;
Short=Hox-7
gi|464147|dbj|BAA01209.1| Chox-7 protein [Gallus gallus]
Length = 288
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 158 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 211
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 212 RRAKAKRLQ 220
>gi|297672368|ref|XP_002814273.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Pongo
abelii]
Length = 365
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 176 RSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARVQVWFQNRRAKCR 230
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N LH G GA +
Sbjct: 231 KQE------NQLHKGVLIGAAS 246
>gi|196010643|ref|XP_002115186.1| hypothetical protein TRIADDRAFT_9493 [Trichoplax adhaerens]
gi|190582569|gb|EDV22642.1| hypothetical protein TRIADDRAFT_9493, partial [Trichoplax
adhaerens]
Length = 59
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES+F++ T P +EI +L +SE + WFQNRRAR +
Sbjct: 2 RARTTFTRDQLKDLESLFEK-THYPDIVAREEIGQKLG----LSEARIQIWFQNRRARWR 56
Query: 165 RKQ 167
RK+
Sbjct: 57 RKE 59
>gi|348530450|ref|XP_003452724.1| PREDICTED: homeobox protein Nkx-3.1-like [Oreochromis niloticus]
Length = 194
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 139 VELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGG 183
+L++ +++ET V WFQNRR ++KRKQ S L+ G G
Sbjct: 114 AQLARTLRLTETQVKIWFQNRRYKTKRKQQTSEFCKDLYKAEGLG 158
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G + R R T T QL LE FD+ T P +E+ V + ++E V WF
Sbjct: 15 SNGKRKQRRYRTTFTQFQLDELERAFDK-THYPDVFMREELAVRV----HLTEARVQVWF 69
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
QNRRA+ ++++ +S + + +G G +
Sbjct: 70 QNRRAKWRKREKLSYNVHQQQHGSNGEVSS 99
>gi|157117064|ref|XP_001658682.1| hypothetical protein AaeL_AAEL007831 [Aedes aegypti]
gi|108876214|gb|EAT40439.1| AAEL007831-PA [Aedes aegypti]
Length = 246
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE 140
AG L + D L G + R R T TP QLQ LE++F Q T P +E+ +
Sbjct: 2 AGPFLSPLPGDLLTEYMFGRRRQRRNRTTFTPQQLQELETLF-QKTHYPDVFLREEVALR 60
Query: 141 LSQHGQISETNVYNWFQNRRARSKRK 166
+S +SE V WFQNRRA+ +++
Sbjct: 61 IS----LSEARVQVWFQNRRAKWRKQ 82
>gi|19032236|emb|CAC85262.2| Pax-6B protein [Dugesia japonica]
Length = 579
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTP---SKQKIKEITVELSQHGQISETNVYNWF 156
+K S R R + T Q+ +LE F++ T P S++K LSQ+ +++ET + WF
Sbjct: 321 NKKSQRSRTSFTNDQINLLEKEFER-THYPDVFSREK-------LSQNLKVAETRIQVWF 372
Query: 157 QNRRARSKRKQLVSSSANTLHNGG--------GGGAGAGAGGADSEVETEVD 200
NRRA+ +R++ S N L NG G+G A DS + T +
Sbjct: 373 SNRRAKWRREE--KSEENNLPNGMIHSDISNIEPGSGVSATSNDSIINTNTN 422
>gi|441623744|ref|XP_003264034.2| PREDICTED: paired mesoderm homeobox protein 2 [Nomascus leucogenys]
Length = 180
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 42 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 96
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 97 RSASLLKS 104
>gi|432892225|ref|XP_004075715.1| PREDICTED: short stature homeobox protein 2-like [Oryzias latipes]
Length = 283
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 112 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 166
Query: 165 RKQLVSSSANTLHNGGGGGAG 185
+++ N LH G GA
Sbjct: 167 KQE------NQLHKGVLIGAA 181
>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
Length = 220
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 33 VVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDP 92
V N + + +M D + + A+ ++ ++ + ++ + A +G+ D
Sbjct: 35 VANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDF 94
Query: 93 LMTSGGGHKISA-------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
+ S G +S R R T T QL LE IF + T P +EI +L
Sbjct: 95 HLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLE-THYPDIYTREEIASKL---- 149
Query: 146 QISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 150 HLTEARVQVWFQNRRAKFRKQE 171
>gi|355567408|gb|EHH23749.1| hypothetical protein EGK_07287, partial [Macaca mulatta]
gi|355753004|gb|EHH57050.1| hypothetical protein EGM_06610, partial [Macaca fascicularis]
Length = 167
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 29 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 83
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 84 RSASLLKS 91
>gi|334347460|ref|XP_001371410.2| PREDICTED: short stature homeobox protein 2-like [Monodelphis
domestica]
Length = 360
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 93 LMTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
+M G KI R+ R T QL LE +FD+ T P + ELSQ +SE
Sbjct: 157 VMEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEAR 211
Query: 152 VYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
V WFQNRRA+ ++++ N LH G GA +
Sbjct: 212 VQVWFQNRRAKCRKQE------NQLHKGVLIGAAS 240
>gi|195402227|ref|XP_002059708.1| GJ19746 [Drosophila virilis]
gi|194155922|gb|EDW71106.1| GJ19746 [Drosophila virilis]
Length = 3176
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 78 LAAAGGRLGNIYCDPLMTS---GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKI 134
L+AA + + C PL +S K + R R T P QL L + Q PS++ +
Sbjct: 2883 LSAAAVKAND--CLPLDSSVQLSAPSKQNKRLRTTILPDQLNFLYECY-QTESNPSRKML 2939
Query: 135 KEITVELSQHGQISETNVYNWFQNRRARSK--RKQLVSSSANTLHNGGGGGAGAGAGGAD 192
+EI+ +++ ++ V WFQN RA+ K R Q + + +N G +G AG ++
Sbjct: 2940 EEISKKVNLKKRV----VQVWFQNSRAKDKKSRNQRQYAHISDDNNSFDGSSGKEAGNSN 2995
Query: 193 S 193
S
Sbjct: 2996 S 2996
>gi|56694814|gb|AAW23069.1| Otx-a [Oikopleura dioica]
Length = 351
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C P+ G + R+R T T QL ILES+F + T P +E+ ++++ + E
Sbjct: 63 CPPMY--GLPSRKQRRERTTFTRAQLDILESLFGK-TRYPDIFMREEVALKIN----LPE 115
Query: 150 TNVYNWFQNRRARSKRKQ 167
+ V WF+NRRA+ +++Q
Sbjct: 116 SRVQVWFKNRRAKYRQQQ 133
>gi|256093000|ref|XP_002582165.1| homeobox protein aristaless-related [Schistosoma mansoni]
gi|353228797|emb|CCD74968.1| homeobox protein aristaless-related [Schistosoma mansoni]
Length = 411
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
AR R T + QL ILE+ FD P ++I +LS +SE+ V WFQNRRA+
Sbjct: 65 ARHRTTFSVQQLSILEAAFD-NCPYPDAVTREDIASKLS----LSESRVQVWFQNRRAKW 119
Query: 164 KRKQ 167
++++
Sbjct: 120 RKQE 123
>gi|121483837|gb|ABM54213.1| PRRX2 [Pan paniscus]
Length = 166
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 28 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 82
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 83 RSASLLKS 90
>gi|194769256|ref|XP_001966722.1| GF19173 [Drosophila ananassae]
gi|190618243|gb|EDV33767.1| GF19173 [Drosophila ananassae]
Length = 281
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|120974103|gb|ABM46639.1| PRRX2 [Gorilla gorilla]
Length = 166
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 28 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 82
Query: 171 SSANTLHNGGGGGA 184
SA+ L + A
Sbjct: 83 RSASLLKSYSQEAA 96
>gi|440901418|gb|ELR52364.1| Homeobox protein EMX1 [Bos grunniens mutus]
Length = 303
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 66 VEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQG 125
V S+SA D A A ++ D L+ G + R R +P QL LE F++
Sbjct: 172 VPFSLSVSAVGDAATAS----DVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKN 227
Query: 126 TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
++ K++ LS +SET V WFQNRR + KR++L
Sbjct: 228 HYVVGAER-KQLAGSLS----LSETQVKVWFQNRRTKYKRQKL 265
>gi|324508973|gb|ADY43784.1| Homeobox protein ceh-37 [Ascaris suum]
Length = 223
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
TS GG + + R R T T QLQ+LE+++ T P +++ E+S ++ET V
Sbjct: 38 TSNGGVRKARRGRTTFTRGQLQMLEALYA-TTRYPDVFSRQKLADEIS----LNETRVQV 92
Query: 155 WFQNRRARSK 164
WF+NRRA+S+
Sbjct: 93 WFKNRRAKSR 102
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T TP QL+ LE F++ T P +E L+Q +++E V WF NRRAR +
Sbjct: 191 RSRTTFTPEQLEELEKAFER-THYPDIYTREE----LAQRTKLTEARVQVWFSNRRARWR 245
Query: 165 RKQ 167
++Q
Sbjct: 246 KQQ 248
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 91 DPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
DPL H+ R R T T QL LE F++ + P +E+ ++++ + E
Sbjct: 48 DPLRAPSKKHR---RNRTTFTTYQLHELERAFEK-SHYPDVYSREELALKVN----LPEV 99
Query: 151 NVYNWFQNRRARSKRKQLVSSSANTLHNGG 180
V WFQNRRA+ +R++ + S N +G
Sbjct: 100 RVQVWFQNRRAKWRRQEKIESGGNCSESGS 129
>gi|47213896|emb|CAF95838.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 84 RLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQ 143
RL +I + G H+ R R T QL+ LE F Q T P ++E L+
Sbjct: 51 RLADIILE--ARYGSQHRKQRRSRTAFTAQQLEALEKTF-QKTHYPDV-VMRE---RLAM 103
Query: 144 HGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVDS-- 201
+ E V WF+NRRA+ ++KQ GA G+ DS+ E S
Sbjct: 104 CTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAAGAPEGSPADDSKAELNSSSAP 163
Query: 202 --LLLHDEHKTTKPENLSSAHS--TSQPQ 226
LL + H P + SS HS +QPQ
Sbjct: 164 TAALLPEGHTPPPPSSSSSCHSEAPAQPQ 192
>gi|341888944|gb|EGT44879.1| hypothetical protein CAEBREN_30559 [Caenorhabditis brenneri]
Length = 277
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 135 KEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLH 177
+E ++L+ +SE V WFQNRRA+ KR + +S+NT H
Sbjct: 117 REKRLQLAHTLNLSENQVKTWFQNRRAKDKRDRKTENSSNTTH 159
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T TP QL+ LE F++ T P +E L+Q +++E V WF NRRAR +
Sbjct: 191 RSRTTFTPEQLEELEKAFER-THYPDIYTREE----LAQRTKLTEARVQVWFSNRRARWR 245
Query: 165 RKQ 167
++Q
Sbjct: 246 KQQ 248
>gi|354503916|ref|XP_003514026.1| PREDICTED: paired mesoderm homeobox protein 2-like [Cricetulus
griseus]
Length = 281
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 143 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAT 197
Query: 171 SSANTLHNGG 180
SA+ L + G
Sbjct: 198 RSASLLKSYG 207
>gi|59498075|gb|AAW88300.1| orthodenticle homolog Otxa [Oikopleura dioica]
Length = 343
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C P+ G + R+R T T QL ILES+F + T P +E+ ++++ + E
Sbjct: 55 CPPMY--GLPSRKQRRERTTFTRAQLDILESLFGK-TRYPDIFMREEVALKIN----LPE 107
Query: 150 TNVYNWFQNRRARSKRKQ 167
+ V WF+NRRA+ +++Q
Sbjct: 108 SRVQVWFKNRRAKFRQQQ 125
>gi|297672370|ref|XP_002814274.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Pongo
abelii]
Length = 353
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 176 RSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARVQVWFQNRRAKCR 230
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N LH G GA +
Sbjct: 231 KQE------NQLHKGVLIGAAS 246
>gi|357614930|gb|EHJ69376.1| hypothetical protein KGM_17721 [Danaus plexippus]
Length = 298
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE 140
AG L + D L G + R R T TP QL LES+F Q T P +E+ +
Sbjct: 2 AGPYLSPLPGDLLTEYMFGRRRQRRNRTTFTPQQLSELESLF-QKTHYPDVFLREEVALR 60
Query: 141 LSQHGQISETNVYNWFQNRRARSKRK 166
+S +SE V WFQNRRA+ +++
Sbjct: 61 IS----LSEARVQVWFQNRRAKWRKQ 82
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LE F Q T P +EI +++ ++E V WFQNRRA+ +
Sbjct: 140 RIRTTFTSAQLKELERAF-QETHYPDIYTREEIAMKI----DLTEARVQVWFQNRRAKFR 194
Query: 165 RKQLVSSSANTLHNGGGGGAGAGA 188
+++ ++ ++ +G G +GA +
Sbjct: 195 KQERLAQQKSSSQSGIGVDSGASS 218
>gi|213626795|gb|AAI70131.1| Homeodomain transcription factor Xvex-1 [Xenopus laevis]
Length = 285
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 46 EQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISAR 105
++L+T R+ + V CE+ + ++ D + CD +AR
Sbjct: 87 QELDTSRRALMV-VPACERSTDQGNKVTGTTD----TNKKAKPVCD--------EDAAAR 133
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
R +P QL+ LE F + S +K + LS+ ++SET + WFQNRR + KR
Sbjct: 134 ARTKFSPEQLEELERSFKENRYIGSSEKRR-----LSKVLKLSETQIKTWFQNRRMKFKR 188
Query: 166 K 166
+
Sbjct: 189 Q 189
>gi|56044546|dbj|BAD72873.1| homeobox protein [Hemicentrotus pulcherrimus]
Length = 237
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 111 TPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T +QLQILE+ F+ Q G +++ +L+ ++ E + WFQNRR+R +R
Sbjct: 29 TELQLQILETAFNDNQYPGITTRE-------QLASSLKLGEDRILVWFQNRRSRLRRASF 81
Query: 169 VSSSAN 174
V SS +
Sbjct: 82 VPSSVH 87
>gi|334182901|ref|NP_001185103.1| homeobox-leucine zipper family protein [Arabidopsis thaliana]
gi|322518401|sp|P0CJ65.1|ATB54_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-54; AltName:
Full=HD-ZIP protein ATHB-54; AltName: Full=Homeodomain
transcription factor ATHB-54
gi|332192652|gb|AEE30773.1| homeobox-leucine zipper family protein [Arabidopsis thaliana]
Length = 227
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP+QL++LE F++ +K+ L++ + + V WFQNRRAR K KQL
Sbjct: 73 TPIQLRLLEESFEEEKRLEPDRKLW-----LAEKLGLQPSQVAVWFQNRRARYKTKQL 125
>gi|112818582|ref|NP_001036813.1| zerknullt [Tribolium castaneum]
gi|13241683|gb|AAK16424.1|AF321227_4 Zen [Tribolium castaneum]
gi|270002807|gb|EEZ99254.1| zerknull [Tribolium castaneum]
Length = 246
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE F G ++I +++++ +SE + WFQNRR + K
Sbjct: 81 RARTAYTSAQLVELEREFHHGKYLSRPRRI-----QIAENLNLSERQIKIWFQNRRMKHK 135
Query: 165 RKQL------VSSSANTLHNGGGGGAGAGAGGADSEVETEVDSLLLH 205
++Q+ SS A T + + A AD ++ VD LL H
Sbjct: 136 KEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQI---VDRLLSH 179
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 144 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 198
Query: 165 RKQLVSSSANTLHN 178
R++ + +SA LH+
Sbjct: 199 RQEKMDASAVKLHD 212
>gi|321459621|gb|EFX70672.1| hypothetical protein DAPPUDRAFT_36992 [Daphnia pulex]
Length = 74
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 94 MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
++S G K R R T T QL LE +F++ T P + +L++ +SE V
Sbjct: 5 VSSSGSSKKPRRNRTTFTSAQLSALEKVFER-THYPDAF----VREDLAKRVSLSEARVQ 59
Query: 154 NWFQNRRARSKRKQ 167
WFQNRRA+ +R +
Sbjct: 60 VWFQNRRAKFRRNE 73
>gi|225455262|ref|XP_002271523.1| PREDICTED: homeobox-leucine zipper protein ATHB-12 [Vitis vinifera]
gi|302143960|emb|CBI23065.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
Q+Q LESIF+ + +++K +E+ VEL + V WFQN+RAR K KQ+
Sbjct: 33 QVQYLESIFESDSKLEARKK-EELAVELG----MQPRQVAIWFQNKRARWKSKQI 82
>gi|148227002|ref|NP_001081954.1| homeobox protein vex1 [Xenopus laevis]
gi|82224827|sp|Q9W769.1|VEX1_XENLA RecName: Full=Homeobox protein vex1; AltName: Full=Homeodomain
transcription factor vex-1; AltName: Full=Ventral
homeobox protein; AltName: Full=Xvex-1
gi|5326874|gb|AAD42079.1|AF149307_1 homeodomain transcription factor Xvex-1 [Xenopus laevis]
Length = 285
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 46 EQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISAR 105
++L+T R+ + V CE+ + ++ D + CD +AR
Sbjct: 87 QELDTSRRALMV-VPACERSTDQGNKVTGTTD----TNKKAKPVCD--------EDAAAR 133
Query: 106 QRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKR 165
R +P QL+ LE F + S +K + LS+ ++SET + WFQNRR + KR
Sbjct: 134 ARTKFSPEQLEELERSFKENRYIGSSEKRR-----LSKVLKLSETQIKTWFQNRRMKFKR 188
Query: 166 K 166
+
Sbjct: 189 Q 189
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +QLQ LE F Q T P +E+ V + ++E V WFQNRRA+ +
Sbjct: 7 RYRTTFNTLQLQELERAF-QRTHYPDVFFREELAVRI----DLTEARVQVWFQNRRAKWR 61
Query: 165 RKQLVSSSANTLHNGG 180
+++ + S GG
Sbjct: 62 KQEKIGGSMGDYKEGG 77
>gi|1764092|gb|AAB39864.1| paired-like homeodomain protein PRX2 [Homo sapiens]
Length = 164
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 26 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 80
Query: 171 SSANTL 176
SA+ L
Sbjct: 81 RSASLL 86
>gi|53749732|ref|NP_001005459.1| homeobox protein EMX1 [Xenopus (Silurana) tropicalis]
gi|82236381|sp|Q6GLB9.1|EMX1_XENTR RecName: Full=Homeobox protein EMX1; AltName: Full=Empty spiracles
homolog 1; AltName: Full=Empty spiracles-like protein 1
gi|49250450|gb|AAH74580.1| empty spiracles homeobox 1, gene 2 [Xenopus (Silurana) tropicalis]
gi|89267903|emb|CAJ82390.1| empty spiracles homolog 1 (Drosophila) [Xenopus (Silurana)
tropicalis]
Length = 233
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 86 GNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
G++ + L+ G + R R +P QL LE F++ ++ K++ LS
Sbjct: 118 GDVSQESLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAER-KQLASSLS--- 173
Query: 146 QISETNVYNWFQNRRARSKRKQL 168
+SET V WFQNRR + KR++L
Sbjct: 174 -LSETQVKVWFQNRRTKYKRQKL 195
>gi|405976917|gb|EKC41395.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 280
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 38 MYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSG 97
Y K+ + + R+ VY C + LS ++ A +G +L + + G
Sbjct: 116 CYRKIQATDWVRRAREN--VYHLACFACDSCQRQLSTGEEFALSGDQLLCLRHYTSLVEG 173
Query: 98 GGHKIS--------ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
K S R R + T QLQIL++ F + P Q++ I + ++++
Sbjct: 174 DTDKDSELSSKPKAKRVRSSFTEEQLQILQANF-RIESNPDSQELNRIAITAGVSRRVAQ 232
Query: 150 TNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEV 195
WFQN RAR K++QL SS ++ N G G + G++ ++
Sbjct: 233 V----WFQNARARQKKQQLYSSQSSRSINSNGYSHGQWSSGSEGQL 274
>gi|194746492|ref|XP_001955714.1| GF16103 [Drosophila ananassae]
gi|190628751|gb|EDV44275.1| GF16103 [Drosophila ananassae]
Length = 489
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 416 LAQSLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGSGGSERNLHNGSGDEDDDEL 469
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 470 IDMEMDDCPSDEEHE 484
>gi|170098278|ref|XP_001880358.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644796|gb|EDR09045.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 685
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ R T QL++LE++F + T + + EL+ ++ V WFQNRRA+ K
Sbjct: 59 KHRKRTTSAQLKVLETVFKRDT-----KPNASLRTELAAQLDMTARGVQVWFQNRRAKEK 113
Query: 165 RKQLVSSSANT 175
K SS+ T
Sbjct: 114 VKATKSSAPKT 124
>gi|242253860|ref|NP_001156359.1| homeobox protein MSX-1 [Sus scrofa]
gi|239937384|dbj|BAH79128.1| homeo box msh-like 1 protein [Sus scrofa]
Length = 303
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|444724600|gb|ELW65202.1| Short stature homeobox protein 2 [Tupaia chinensis]
Length = 184
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 58 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARV 112
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNG 179
WFQNRRA+ ++++ N LH G
Sbjct: 113 QVWFQNRRAKCRKQE------NQLHKG 133
>gi|431897239|gb|ELK06501.1| Homeobox protein MSX-1 [Pteropus alecto]
Length = 303
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|426343704|ref|XP_004038429.1| PREDICTED: homeobox protein MSX-1 [Gorilla gorilla gorilla]
Length = 303
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|156844945|ref|XP_001645533.1| hypothetical protein Kpol_1004p50 [Vanderwaltozyma polyspora DSM
70294]
gi|156116197|gb|EDO17675.1| hypothetical protein Kpol_1004p50 [Vanderwaltozyma polyspora DSM
70294]
Length = 411
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL++ F + TP KQK + L++ ++SE V WFQNRR
Sbjct: 185 LARRKRRRTSTQELNILQNEFAKD-ATPDKQK----RIYLAERCKMSEKAVQIWFQNRRQ 239
Query: 162 RSKRKQLVS 170
KR+++ +
Sbjct: 240 AEKRRKIAA 248
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G + R R T T QL LE FD+ T P +E+ V + ++E V WF
Sbjct: 34 SNGKRNERRYRTTFTQFQLDELERAFDK-THYPDVFMREELAVRV----HLTEARVQVWF 88
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
QNRRA+ ++++ +S + + +G G +
Sbjct: 89 QNRRAKWRKREKLSYNVHQQQHGSNGEVSS 118
>gi|402912573|ref|XP_003918830.1| PREDICTED: short stature homeobox protein-like [Papio anubis]
Length = 294
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 121 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 175
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 176 KQE------NQMHKG 184
>gi|671861|emb|CAA35965.1| empty spiracles homeotic protein [Drosophila melanogaster]
gi|226721|prf||1604244A empty spiracles gene
Length = 494
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 421 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 474
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 475 IDMEMDECPSDEEHE 489
>gi|8778855|gb|AAF79854.1|AC000348_7 T7N9.11 [Arabidopsis thaliana]
Length = 495
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP+QL++LE F++ +K+ L++ + + V WFQNRRAR K KQL
Sbjct: 73 TPIQLRLLEESFEEEKRLEPDRKL-----WLAEKLGLQPSQVAVWFQNRRARYKTKQL 125
>gi|24646714|ref|NP_731868.1| empty spiracles [Drosophila melanogaster]
gi|7299821|gb|AAF54999.1| empty spiracles [Drosophila melanogaster]
gi|60677903|gb|AAX33458.1| RE15812p [Drosophila melanogaster]
gi|220943454|gb|ACL84270.1| ems-PA [synthetic construct]
gi|220953482|gb|ACL89284.1| ems-PA [synthetic construct]
Length = 494
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 421 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 474
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 475 IDMEMDECPSDEEHE 489
>gi|255717921|ref|XP_002555241.1| KLTH0G04686p [Lachancea thermotolerans]
gi|238936625|emb|CAR24804.1| KLTH0G04686p [Lachancea thermotolerans CBS 6340]
Length = 375
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL+S F+ TP KQK ELS+ +SE + WFQN+R
Sbjct: 161 LARRKRRRTSKHELNILQSEFE-ICPTPDKQK----RAELSKRCCMSEKAIQIWFQNKRQ 215
Query: 162 RSKRKQLVSSS 172
KR+Q +SS
Sbjct: 216 SVKRQQKATSS 226
>gi|296486341|tpg|DAA28454.1| TPA: homeobox protein MSX-1 [Bos taurus]
Length = 297
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|195429318|ref|XP_002062710.1| GK19597 [Drosophila willistoni]
gi|194158795|gb|EDW73696.1| GK19597 [Drosophila willistoni]
Length = 288
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G + R R T + QL LE +F++ T P +E+ ++ +SE V W
Sbjct: 106 STGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREELATKV----HLSEARVQVW 160
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGG 181
FQNRRA+ +R + S + L + G
Sbjct: 161 FQNRRAKFRRNERSVSGSRPLMDHAG 186
>gi|440903384|gb|ELR54053.1| Homeobox protein Nkx-3.1 [Bos grunniens mutus]
Length = 251
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
L+++ +++ET V WFQNRR ++KRKQL S N
Sbjct: 174 LAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGN 207
>gi|444521882|gb|ELV13224.1| Homeobox protein MSX-1 [Tupaia chinensis]
Length = 303
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|410988020|ref|XP_004000287.1| PREDICTED: short stature homeobox protein isoform 2 [Felis catus]
Length = 306
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 133 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 187
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 188 KQE------NQMHKG 196
>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
scrofa]
Length = 300
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 174 KQE------NQMHKG 182
>gi|312085361|ref|XP_003144649.1| hypothetical protein LOAG_09072 [Loa loa]
Length = 171
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
QL+I+E+ F+ T P + + + I V+ S +SE + WF NRRAR RK +SA
Sbjct: 54 QLEIMEAAFNANT-YPDQDERERIAVKTS----LSEDKIMTWFSNRRARC-RKNFAFTSA 107
Query: 174 NTL 176
++L
Sbjct: 108 SSL 110
>gi|197281984|gb|ACH57171.1| Prd/Pax-like protein [Trichoplax adhaerens]
Length = 60
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LES+F++ T P +EI +L +SE + WFQNRRAR +
Sbjct: 3 RARTTFTRDQLKDLESLFEK-THYPDIVAREEIGQKLG----LSEARIQIWFQNRRARWR 57
Query: 165 RKQ 167
RK+
Sbjct: 58 RKE 60
>gi|212646738|ref|NP_508525.3| Protein CEH-31 [Caenorhabditis elegans]
gi|218512073|sp|Q22910.2|HM31_CAEEL RecName: Full=Homeobox protein ceh-31
gi|373254124|emb|CCD66476.1| Protein CEH-31 [Caenorhabditis elegans]
Length = 260
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI--TVELSQHGQISETNVYNWF 156
G K + + R T QLQ LE+ F+ KQK + +EL+ +++T V W+
Sbjct: 90 GSKKARKARTIFTDKQLQELENTFE-------KQKYLSVQDRMELAHRMGLTDTQVKTWY 142
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGA 184
QNRR + KR+ S + LH+ G A
Sbjct: 143 QNRRTKWKRQ--ASVGMDLLHDAGNMAA 168
>gi|410958088|ref|XP_003985653.1| PREDICTED: homeobox protein MSX-1, partial [Felis catus]
Length = 285
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 151 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 204
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 205 RRAKAKRLQ 213
>gi|350399127|ref|XP_003485430.1| PREDICTED: short stature homeobox protein 2-like [Bombus impatiens]
Length = 384
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
SG G+ R R T QL LE +FD+ T P ++E ELSQ +SE V W
Sbjct: 183 SGNGNGKQRRSRTNFTLEQLAELERLFDE-THYPDA-FMRE---ELSQRLGLSEARVQVW 237
Query: 156 FQNRRARSKRKQLVSSSANTLHNG 179
FQNRRA+ ++ + + LH G
Sbjct: 238 FQNRRAKCRKHE------SQLHKG 255
>gi|56199803|gb|AAV84357.1| predicted NUP98/PRRX2 fusion protein, partial [Homo sapiens]
Length = 268
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L S
Sbjct: 132 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAS 186
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 187 RSASLLKS 194
>gi|449275732|gb|EMC84500.1| Short stature homeobox protein, partial [Columba livia]
Length = 211
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 118 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 172
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 173 KQE------NQMHKGVILGTAS 188
>gi|348501648|ref|XP_003438381.1| PREDICTED: homeobox protein OTX1 B-like [Oreochromis niloticus]
Length = 332
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSAN 174
++Q SSA
Sbjct: 95 QQQQSGSSAK 104
>gi|344308172|ref|XP_003422752.1| PREDICTED: short stature homeobox protein-like [Loxodonta africana]
Length = 291
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 118 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 172
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 173 KQE------NQMHKG 181
>gi|399911|sp|P18488.2|EMS_DROME RecName: Full=Homeotic protein empty spiracles
gi|8820|emb|CAA46985.1| ems W13 [Drosophila melanogaster]
Length = 497
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 424 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 477
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 478 IDMEMDECPSDEEHE 492
>gi|410988018|ref|XP_004000286.1| PREDICTED: short stature homeobox protein isoform 1 [Felis catus]
Length = 293
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 120 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 174
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 175 KQE------NQMHKG 183
>gi|397488573|ref|XP_003815333.1| PREDICTED: short stature homeobox protein-like [Pan paniscus]
Length = 218
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 174 KQE------NQMHKG 182
>gi|395840473|ref|XP_003793082.1| PREDICTED: short stature homeobox protein [Otolemur garnettii]
Length = 289
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 116 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 170
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 171 KQE------NQMHKG 179
>gi|47224717|emb|CAG00311.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSAN 174
++Q SSA
Sbjct: 95 QQQQSGSSAK 104
>gi|88913542|sp|Q2VL86.1|MSX1_SAIBB RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370505|gb|AAZ30467.1| msh homeobox 1-like protein [Saimiri boliviensis]
Length = 297
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|393241485|gb|EJD49007.1| homeobox-domain-containing protein, partial [Auricularia delicata
TFB-10046 SS5]
Length = 205
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G + R+R TP QL LE IF Q +P+ + KEI+ L + E WF
Sbjct: 60 GASETTAKRKRSRVTPDQLLHLERIFAQDR-SPTAARRKEISEMLG----MQERQTQIWF 114
Query: 157 QNRRARSK 164
QNRRA++K
Sbjct: 115 QNRRAKAK 122
>gi|385654510|gb|AFI62006.1| Hox-C13b [Anguilla japonica]
Length = 307
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 64/176 (36%), Gaps = 47/176 (26%)
Query: 42 VMTDEQLETLRKQIAVYATICEQL--------VEMHKSLSAH--------------QDLA 79
+ E+L + K+ A Y + V + S+SAH Q A
Sbjct: 135 ALPTEELSSRAKEFAFYPSFASSYQAVPGYLDVSVVPSISAHPEPRHDALIPMEGYQHWA 194
Query: 80 AAGGRLGNIYCD------------------PLMTSGGGHKISARQRWTPTPVQLQILESI 121
+ G G +YC PL ++ ++R T VQL+ LE
Sbjct: 195 LSNGWDGQVYCSKEQTQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKE 254
Query: 122 FDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLH 177
+ SK K+ +S +SE V WFQNRR K K+ VS S + H
Sbjct: 255 Y-----AASKFITKDKRRRISAATNLSERQVTIWFQNRRV--KEKKFVSKSKTSAH 303
>gi|426256594|ref|XP_004021924.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.3 [Ovis
aries]
Length = 263
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
Q+ LE F+Q +K L+ ++E+ V WFQNRR + ++K + S+
Sbjct: 150 QIFALEKTFEQ-----TKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSS 204
Query: 174 NTLHNGGGGGAGAGAGGADSEVETEVD 200
+T G AGAGG + ETE D
Sbjct: 205 STPRAPG----SAGAGGERAASETEDD 227
>gi|410915866|ref|XP_003971408.1| PREDICTED: homeobox-containing protein 1-like [Takifugu rubripes]
Length = 470
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT-----------VE 140
P+ T+ G ++ R+T L ++ES F+ P + K +EI +
Sbjct: 305 PIATAPGTFRLRRGSRFTWRKECLAVMESYFNDNQ-YPDEAKREEIANACNAVIQKPGKK 363
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQ----LVSSSANTLHNGGGGGAGAGAGGADSEVE 196
LS +++ VYNWF NRR KR+ ++ S + + GG G D
Sbjct: 364 LSDLERVTSLKVYNWFANRRKEIKRRANIATILESHGIDVQSPGGHSNSDDIDGNDF--- 420
Query: 197 TEVDSLLLHDEHK 209
+E D +H EH+
Sbjct: 421 SEQDDSAVHSEHQ 433
>gi|195149884|ref|XP_002015885.1| GL11298 [Drosophila persimilis]
gi|194109732|gb|EDW31775.1| GL11298 [Drosophila persimilis]
Length = 269
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G + R R T + QL LE +F++ T P +E+ ++ +SE V W
Sbjct: 106 STGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREELATKV----HLSEARVQVW 160
Query: 156 FQNRRARSKRKQ 167
FQNRRA+ +R +
Sbjct: 161 FQNRRAKFRRNE 172
>gi|332692517|gb|AEE90193.1| Homeobox C13b [Anguilla anguilla]
Length = 307
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 64/176 (36%), Gaps = 47/176 (26%)
Query: 42 VMTDEQLETLRKQIAVYATICEQL--------VEMHKSLSAH--------------QDLA 79
+ E+L + K+ A Y + V + S+SAH Q A
Sbjct: 135 ALPTEELSSRAKEFAFYPSFASSYQAVPGYLDVSVVPSISAHPEPRHDALIPMEGYQHWA 194
Query: 80 AAGGRLGNIYCD------------------PLMTSGGGHKISARQRWTPTPVQLQILESI 121
+ G G +YC PL ++ ++R T VQL+ LE
Sbjct: 195 LSNGWDGQVYCSKEQTQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKE 254
Query: 122 FDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLH 177
+ SK K+ +S +SE V WFQNRR K K+ VS S + H
Sbjct: 255 Y-----AASKFITKDKRRRISAATNLSERQVTIWFQNRRV--KEKKFVSKSKTSAH 303
>gi|195500938|ref|XP_002097588.1| GE26304 [Drosophila yakuba]
gi|194183689|gb|EDW97300.1| GE26304 [Drosophila yakuba]
Length = 499
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 426 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 479
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 480 IDMEMDECPSDEEHE 494
>gi|311275888|ref|XP_003134962.1| PREDICTED: short stature homeobox protein-like isoform 2 [Sus
scrofa]
Length = 292
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 174 KQE------NQMHKG 182
>gi|301622984|ref|XP_002940803.1| PREDICTED: paired mesoderm homeobox protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 248
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA--- 161
R R T QLQ LE +F++ T P ++E +L++ +SE V WFQNRRA
Sbjct: 96 RNRTTFNSSQLQALERVFER-THYPDA-FVRE---DLARRVSLSEARVQVWFQNRRAKFR 150
Query: 162 RSKRKQLVSSSANTL 176
R++R L S SA L
Sbjct: 151 RNERAMLASRSATHL 165
>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
Length = 220
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 33 VVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDP 92
V N + + +M D + + A+ ++ ++ + ++ + A +G+ D
Sbjct: 35 VANHMNHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDF 94
Query: 93 LMTSGGGHKISA-------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
+ S G +S R R T T QL LE IF + T P +EI +L
Sbjct: 95 HLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLE-THYPDIYTREEIASKL---- 149
Query: 146 QISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 150 HLTEARVQVWFQNRRAKFRKQE 171
>gi|194901328|ref|XP_001980204.1| GG19873 [Drosophila erecta]
gi|190651907|gb|EDV49162.1| GG19873 [Drosophila erecta]
Length = 503
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 430 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 483
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 484 IDMEMDECPSDEEHE 498
>gi|410900744|ref|XP_003963856.1| PREDICTED: homeobox protein OTX1 B-like [Takifugu rubripes]
Length = 332
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSAN 174
++Q SSA
Sbjct: 95 QQQQSGSSAK 104
>gi|2980868|emb|CAA72534.1| Cn-ems protein [Hydractinia symbiolongicarpus]
Length = 251
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 44 TDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKIS 103
T Q+++ +KQ V+A ++ + S H L ++ R
Sbjct: 133 THSQIKSEKKQDEVFAASPGEVRDYKPIKSKHHKLTSSKKR------------------- 173
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R R TP QL LE+ F++G ++ +L+Q +++ET + WFQNRR +
Sbjct: 174 KRHRTAFTPTQLLGLENSFERGHYLVGDER-----RQLAQFLRLTETQIKVWFQNRRTKW 228
Query: 164 KRKQ 167
KR++
Sbjct: 229 KRQR 232
>gi|332027708|gb|EGI67776.1| Short stature homeobox protein [Acromyrmex echinatior]
Length = 307
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 65 LVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQ 124
LV + + + + G+ ++ ++G G+ R R T QL LE +FD+
Sbjct: 83 LVSSNDQVKVSSQITRSSGQEDSVKGSSCRSNGSGNGKQRRSRTNFTIEQLAELERLFDE 142
Query: 125 GTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGG 182
T P ++E ELSQ +SE V WFQNRRA+ ++ + + LH G G
Sbjct: 143 -THYPDA-FMRE---ELSQRLGLSEARVQVWFQNRRAKCRKHE------SQLHKGVAG 189
>gi|198456647|ref|XP_001360401.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
gi|198135692|gb|EAL24976.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
Length = 269
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G + R R T + QL LE +F++ T P +E+ ++ +SE V W
Sbjct: 106 STGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREELATKV----HLSEARVQVW 160
Query: 156 FQNRRARSKRKQ 167
FQNRRA+ +R +
Sbjct: 161 FQNRRAKFRRNE 172
>gi|327268134|ref|XP_003218853.1| PREDICTED: short stature homeobox protein-like [Anolis
carolinensis]
Length = 308
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 135 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 189
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 190 KQE------NQMHKG 198
>gi|149636809|ref|XP_001507596.1| PREDICTED: homeobox protein MSX-1-like [Ornithorhynchus anatinus]
Length = 304
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQ--KIKEITVELSQHGQISETNVYNWFQ 157
HK + + R T QL LE F Q KQ I E E S ++ET V WFQ
Sbjct: 168 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAE-RAEFSSSLSLTETQVKIWFQ 220
Query: 158 NRRARSKRKQ 167
NRRA++KR Q
Sbjct: 221 NRRAKAKRLQ 230
>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
Length = 285
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 111 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 165
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 166 KQE------NQMHKGVILGTAS 181
>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
Length = 220
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 33 VVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDP 92
V N + + +M D + + A+ ++ ++ + ++ + A +G+ D
Sbjct: 35 VANHMNHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDF 94
Query: 93 LMTSGGGHKISA-------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
+ S G +S R R T T QL LE IF + T P +EI +L
Sbjct: 95 HLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLE-THYPDIYTREEIASKL---- 149
Query: 146 QISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 150 HLTEARVQVWFQNRRAKFRKQE 171
>gi|45190916|ref|NP_985170.1| AER314Wp [Ashbya gossypii ATCC 10895]
gi|44983984|gb|AAS52994.1| AER314Wp [Ashbya gossypii ATCC 10895]
Length = 431
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL+ FDQ TPSK+K +EL+ ++E V WFQN+R
Sbjct: 196 LARRKRRRTSKHELTILQQEFDQ-CRTPSKEK----RIELATRCNMTEKAVQIWFQNKRQ 250
Query: 162 RSKRKQ 167
K+K+
Sbjct: 251 SMKKKR 256
>gi|374108395|gb|AEY97302.1| FAER314Wp [Ashbya gossypii FDAG1]
Length = 431
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
++ R+R + +L IL+ FDQ TPSK+K +EL+ ++E V WFQN+R
Sbjct: 196 LARRKRRRTSKHELTILQQEFDQ-CRTPSKEK----RIELATRCNMTEKAVQIWFQNKRQ 250
Query: 162 RSKRKQ 167
K+K+
Sbjct: 251 SMKKKR 256
>gi|15004980|dbj|BAB62171.1| transcriptional factor [Leucopsarion petersii]
Length = 326
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSAN 174
++Q SSA
Sbjct: 95 QQQQSGSSAK 104
>gi|88913533|sp|Q2VL79.1|MSX1_DAUMA RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370525|gb|AAZ30472.1| msh homeobox 1-like protein [Daubentonia madagascariensis]
Length = 297
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
+SG G + R R T T QL+ LE F Q T P +E+ + + Q++E V
Sbjct: 86 SSGVGKRKQRRYRTTFTNFQLEELERAF-QKTHYPDVFFREELALRI----QLTEARVQV 140
Query: 155 WFQNRRARSKRKQ 167
WFQNRRA+ ++++
Sbjct: 141 WFQNRRAKWRKQE 153
>gi|297491289|ref|XP_002698770.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
gi|296472355|tpg|DAA14470.1| TPA: Homeobox protein Nkx-6.3-like [Bos taurus]
Length = 263
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 99 GHKISARQRWTPTPVQLQI--LESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G+ I ++ PT QI LE F+Q +K L+ ++E+ V WF
Sbjct: 133 GNSIHKKKHTRPTFTGHQIFALEKTFEQ-----TKYLAGPERARLAYSLGMTESQVKVWF 187
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVD 200
QNRR + ++K + S++T G AGAGG + ETE D
Sbjct: 188 QNRRTKWRKKSALEPSSSTPRAPG----SAGAGGERAASETEDD 227
>gi|195380555|ref|XP_002049036.1| GJ20984 [Drosophila virilis]
gi|194143833|gb|EDW60229.1| GJ20984 [Drosophila virilis]
Length = 288
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G + R R T + QL LE +F++ T P ++E EL+ +SE V W
Sbjct: 127 SSGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDA-FVRE---ELATKVHLSEARVQVW 181
Query: 156 FQNRRARSKRKQ 167
FQNRRA+ +R +
Sbjct: 182 FQNRRAKFRRNE 193
>gi|24762822|ref|NP_523862.1| gooseberry-neuro [Drosophila melanogaster]
gi|27923971|sp|P09083.2|GSBN_DROME RecName: Full=Protein gooseberry-neuro; AltName: Full=BSH4;
AltName: Full=Protein gooseberry proximal
gi|7291896|gb|AAF47314.1| gooseberry-neuro [Drosophila melanogaster]
gi|17946362|gb|AAL49215.1| RE64348p [Drosophila melanogaster]
gi|220945952|gb|ACL85519.1| gsb-n-PA [synthetic construct]
gi|220952700|gb|ACL88893.1| gsb-n-PA [synthetic construct]
Length = 449
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNWFQNRRAR 162
R R T T QL+ LE F S+ + ++ EL+Q ++E + WF NRRAR
Sbjct: 184 RSRTTFTAEQLEALERAF-------SRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
Query: 163 SKRKQLVSSSANTLHNGGGGGAGAGAG 189
++ S+S + N G G G G
Sbjct: 237 LRKHSGGSNSGLSPMNSGSSNVGVGVG 263
>gi|224043036|ref|XP_002198003.1| PREDICTED: short stature homeobox protein [Taeniopygia guttata]
Length = 291
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 118 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 172
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 173 KQE------NQMHKGVILGTAS 188
>gi|300793776|ref|NP_001178084.1| homeobox protein Nkx-3.1 [Bos taurus]
gi|296484589|tpg|DAA26704.1| TPA: NK3 homeobox 1-like [Bos taurus]
Length = 243
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 174
L+++ +++ET V WFQNRR ++KRKQL S N
Sbjct: 166 LAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGN 199
>gi|82621589|gb|ABB86466.1| EMXa-ANTP class homeobox protein, partial [Nematostella vectensis]
gi|110339071|gb|ABG67799.1| EMXB, partial [Nematostella vectensis]
Length = 60
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 105 RQRWTPTPVQLQILESIFDQG---TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
R R TP QL LE+ F++ GT KQ L+ + +SET + WFQNRR
Sbjct: 3 RIRTAFTPTQLLHLENAFEKNHYIVGTERKQ--------LASYLNLSETQIKVWFQNRRT 54
Query: 162 RSKRKQ 167
+ KR+Q
Sbjct: 55 KWKRQQ 60
>gi|348557174|ref|XP_003464395.1| PREDICTED: homeobox protein MSX-1-like [Cavia porcellus]
Length = 304
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 170 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 223
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 224 RRAKAKRLQ 232
>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
Length = 306
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 121 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 175
Query: 165 RKQLVSSSANTLHN 178
+++ N +HN
Sbjct: 176 KQE------NQMHN 183
>gi|195571043|ref|XP_002103513.1| GD18937 [Drosophila simulans]
gi|194199440|gb|EDX13016.1| GD18937 [Drosophila simulans]
Length = 496
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA------GAGAGGADSE 194
L+Q+ +SET V WFQNRR + KR Q GG GG+ G+G D
Sbjct: 423 LAQNLNLSETQVKVWFQNRRTKHKRMQQEDE------KGGEGGSQRNMHNGSGDEDDDEL 476
Query: 195 VETEVDSLLLHDEHK 209
++ E+D +EH+
Sbjct: 477 IDMEMDECPSDEEHE 491
>gi|88913541|sp|Q2VL82.1|MSX1_SAGOE RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370521|gb|AAZ30471.1| msh homeobox 1-like protein [Saguinus oedipus]
Length = 297
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|297709290|ref|XP_002831369.1| PREDICTED: short stature homeobox protein isoform 1 [Pongo abelii]
Length = 292
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 174 KQE------NQMHKG 182
>gi|126337096|ref|XP_001362385.1| PREDICTED: short stature homeobox protein-like isoform 1
[Monodelphis domestica]
Length = 292
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 174 KQE------NQMHKGVILGTAS 189
>gi|397497822|ref|XP_003819703.1| PREDICTED: homeobox protein ESX1 [Pan paniscus]
Length = 376
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T QLQ LE+ FD+ + P + + L+ ++E V WFQNRRA+ K
Sbjct: 141 RRRTAFTQFQLQELENFFDE-SQYPDVVARERLAARLN----LTEDRVQVWFQNRRAKWK 195
Query: 165 RKQLVSSSANT 175
R Q V NT
Sbjct: 196 RNQRVLMLRNT 206
>gi|388490558|gb|AFK33345.1| unknown [Medicago truncatula]
Length = 304
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 105 RQRWTPTPVQLQILESIF-DQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R++ PT Q +LE F D T P +++ EL+ + V WFQNRRAR+
Sbjct: 144 RKKLRPTKEQSAVLEDTFKDHSTLNPKQKQ------ELASKLNLGTRQVEVWFQNRRART 197
Query: 164 KRKQ 167
K KQ
Sbjct: 198 KVKQ 201
>gi|355713906|gb|AES04825.1| Paired mesoderm homeobox protein 2 [Mustela putorius furo]
Length = 147
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA--- 161
R R T QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA
Sbjct: 1 RNRTTFNSSQLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFR 55
Query: 162 RSKRKQLVSSSANTLHNGGGGGA 184
R++R L + SA+ L + A
Sbjct: 56 RNERAMLANRSASLLKSYSQEAA 78
>gi|332861345|ref|XP_001138237.2| PREDICTED: homeobox protein ESX1 [Pan troglodytes]
Length = 394
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T QLQ LE+ FD+ + P + + L+ ++E V WFQNRRA+ K
Sbjct: 141 RRRTAFTQFQLQELENFFDE-SQYPDVVARERLAARLN----LTEDRVQVWFQNRRAKWK 195
Query: 165 RKQLVSSSANT 175
R Q V NT
Sbjct: 196 RNQRVLMLRNT 206
>gi|195997519|ref|XP_002108628.1| hypothetical protein TRIADDRAFT_51739 [Trichoplax adhaerens]
gi|190589404|gb|EDV29426.1| hypothetical protein TRIADDRAFT_51739 [Trichoplax adhaerens]
Length = 272
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVE-LSQHGQISETNVYNWFQNRRARSKRKQLVSSS 172
QL ++E +F Q +Q + +E L + + E V NWFQNRRAR KR + SSS
Sbjct: 154 QLNLMEDVFQQ------QQYLSPRDIENLCRKLDLKEHRVKNWFQNRRAREKRAR-TSSS 206
Query: 173 ANTLHN 178
L N
Sbjct: 207 ITVLTN 212
>gi|194756178|ref|XP_001960356.1| GF13323 [Drosophila ananassae]
gi|190621654|gb|EDV37178.1| GF13323 [Drosophila ananassae]
Length = 279
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G + R R T + QL LE +F++ T P +E+ ++ +SE V W
Sbjct: 114 SAGHSRKPRRNRTTFSSAQLTALEKVFER-THYPDAFVREELATKV----HLSEARVQVW 168
Query: 156 FQNRRARSKRKQ 167
FQNRRA+ +R +
Sbjct: 169 FQNRRAKFRRNE 180
>gi|432904340|ref|XP_004077282.1| PREDICTED: homeobox protein OTX1 B-like [Oryzias latipes]
Length = 256
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSAN 174
++Q S+A
Sbjct: 95 QQQQSGSTAK 104
>gi|30704771|gb|AAH51983.1| Msx3 protein [Mus musculus]
Length = 223
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 103 HKTNRKPRTPFTTAQLLALERKFHQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 156
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 157 RRAKAKRLQ 165
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE +F++ T P ++E EL++ ++E V WFQNRRA+ +
Sbjct: 168 RNRTTFTTAQLDALEKVFER-THYPDA-FLRE---ELAKKVDLTEARVQVWFQNRRAKFR 222
Query: 165 RKQ 167
R +
Sbjct: 223 RNE 225
>gi|390461036|ref|XP_003732578.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein MSX-1-like
[Callithrix jacchus]
Length = 289
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 155 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 208
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 209 RRAKAKRLQ 217
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 99 GHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQN 158
G K R R T T QL LE F++ + P +E+ ++++ + E V WFQN
Sbjct: 211 GKKKHRRNRTTFTTYQLHELERAFEK-SHYPDVYSREELALKVN----LPEVRVQVWFQN 265
Query: 159 RRARSKRKQLVSSSA 173
RRA+ +R++ + SSA
Sbjct: 266 RRAKWRRQEKMESSA 280
>gi|119918251|ref|XP_001252698.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
Length = 263
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 99 GHKISARQRWTPTPVQLQI--LESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G+ I ++ PT QI LE F+Q +K L+ ++E+ V WF
Sbjct: 133 GNSIHKKKHTRPTFTGHQIFALEKTFEQ-----TKYLAGPERARLAYSLGMTESQVKVWF 187
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVD 200
QNRR + ++K + S++T G AGAGG + ETE D
Sbjct: 188 QNRRTKWRKKSALEPSSSTPRAPG----SAGAGGERAASETEDD 227
>gi|88913534|sp|Q2VL78.1|MSX1_LEMCA RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370529|gb|AAZ30473.1| msh homeobox 1-like protein [Lemur catta]
Length = 297
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|88913536|sp|Q2VL77.1|MSX1_LEPED RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370533|gb|AAZ30474.1| msh homeobox 1-like protein [Lepilemur edwardsi]
Length = 297
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|405961985|gb|EKC27709.1| Homeobox protein ARX [Crassostrea gigas]
Length = 442
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA--R 162
R R T T QL LE F++ T P +E+ + L +SE V WFQNRRA R
Sbjct: 112 RSRTTFTTYQLHQLERAFEK-TQYPDVFTREELAMRL----DLSEARVQVWFQNRRAKWR 166
Query: 163 SKRKQLVSSSANTLHNGGGGGAG 185
+ K + S N L + G G
Sbjct: 167 KREKAMGRESPNFLQSDSASGLG 189
>gi|332218760|ref|XP_003258528.1| PREDICTED: homeobox protein MSX-1 [Nomascus leucogenys]
Length = 303
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQ--KIKEITVELSQHGQISETNVYNWFQ 157
HK + + R T QL LE F Q KQ I E E S ++ET V WFQ
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAE-RAEFSSSLSLTETQVKIWFQ 221
Query: 158 NRRARSKRKQ 167
NRRA++KR Q
Sbjct: 222 NRRAKAKRLQ 231
>gi|119599105|gb|EAW78699.1| hCG1786841, isoform CRA_d [Homo sapiens]
Length = 221
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 1 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 55
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGA 186
WFQNRRA+ ++++ N LH G GA +
Sbjct: 56 QVWFQNRRAKCRKQE------NQLHKGVLIGAAS 83
>gi|395855591|ref|XP_003800237.1| PREDICTED: homeobox protein MSX-1 [Otolemur garnettii]
Length = 303
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQ--KIKEITVELSQHGQISETNVYNWFQ 157
HK + + R T QL LE F Q KQ I E E S ++ET V WFQ
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAE-RAEFSSSLSLTETQVKIWFQ 221
Query: 158 NRRARSKRKQ 167
NRRA++KR Q
Sbjct: 222 NRRAKAKRLQ 231
>gi|395527040|ref|XP_003765660.1| PREDICTED: short stature homeobox protein isoform 2 [Sarcophilus
harrisii]
Length = 303
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 174 KQE------NQMHKGVILGTAS 189
>gi|395527038|ref|XP_003765659.1| PREDICTED: short stature homeobox protein isoform 1 [Sarcophilus
harrisii]
Length = 292
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 174 KQE------NQMHKGVILGTAS 189
>gi|149047351|gb|EDM00021.1| homeo box, msh-like 1, isoform CRA_b [Rattus norvegicus]
Length = 303
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|88913539|sp|Q2VL80.1|MSX1_PERPO RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370467|gb|AAZ30451.1| msh homeobox 1-like protein [Perodicticus potto]
Length = 297
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|113199783|ref|NP_034965.2| homeobox protein MSX-1 [Mus musculus]
gi|11177822|gb|AAG32466.1| homeobox protein MSX1 variant [Mus musculus]
gi|148705584|gb|EDL37531.1| mCG3750 [Mus musculus]
Length = 303
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 169 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 222
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 223 RRAKAKRLQ 231
>gi|88913535|sp|Q2VL83.1|MSX1_LEORO RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370517|gb|AAZ30470.1| msh homeobox 1-like protein [Leontopithecus rosalia]
Length = 297
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|344251272|gb|EGW07376.1| Short stature homeobox protein 2 [Cricetulus griseus]
Length = 194
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 94 MTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
M G KI R+ R T QL LE +FD+ T P + ELSQ +SE V
Sbjct: 86 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDE-THYPDA----FMREELSQRLGLSEARV 140
Query: 153 YNWFQNRRARSKRKQLVSSSANTLHNG 179
WFQNRRA+ ++++ N LH G
Sbjct: 141 QVWFQNRRAKCRKQE------NQLHKG 161
>gi|395753638|ref|XP_003779635.1| PREDICTED: short stature homeobox protein isoform 2 [Pongo abelii]
Length = 306
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 174 KQE------NQMHKG 182
>gi|149638014|ref|XP_001513012.1| PREDICTED: ALX homeobox protein 1 [Ornithorhynchus anatinus]
Length = 326
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
CD +TS R R T T +QL+ LE +F Q T P + +L+ +++E
Sbjct: 123 CDSNVTSSKKR----RHRTTFTSLQLEELEKVF-QKTHYPDVY----VREQLALRTELTE 173
Query: 150 TNVYNWFQNRRARSKRKQ 167
V WFQNRRA+ ++++
Sbjct: 174 ARVQVWFQNRRAKWRKRE 191
>gi|13592001|ref|NP_112321.1| homeobox protein MSX-1 [Rattus norvegicus]
gi|1841390|dbj|BAA11750.1| Msx-1 protein [Rattus norvegicus]
Length = 297
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|340378369|ref|XP_003387700.1| PREDICTED: paired box protein Pax-3-like [Amphimedon queenslandica]
Length = 264
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 107 RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
R T T QLQ LE+ F + T P +++ + ++ ++E V WFQNRRA+ +R
Sbjct: 79 RTTFTSYQLQELEAAFAK-THYPDVFMREDLALRIN----LTEARVQVWFQNRRAKWRRA 133
Query: 167 QLVSSSA-NTLHNGGGGGAGAGAGGADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQP 225
Q S A + +G G AG GG + ++ H+ T P NLS S
Sbjct: 134 QKASQLAMGDIMSGRGVSMMAGGGGIP-----HMHGMMPHN-FAATLPTNLSPGSSVLMT 187
Query: 226 QHLRNLPPTPRPRDDDDPMCFHTPADISSSQL 257
P+ + P H P + SS +
Sbjct: 188 PKSAGTSPSAH-MFQNKPFVLHHPNQLPSSSM 218
>gi|402592355|gb|EJW86284.1| hypothetical protein WUBG_02805, partial [Wuchereria bancrofti]
Length = 246
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI--TVELSQHGQISETNV 152
+S G K + + R T QLQ LE+ FD KQK + ++L+Q +S+T V
Sbjct: 26 SSIGCGKKARKARTIFTDKQLQELEATFD-------KQKYLSVQDRMDLAQRMGLSDTQV 78
Query: 153 YNWFQNRRARSKRKQLV 169
W+QNRR + KR+ V
Sbjct: 79 KTWYQNRRTKWKRQAAV 95
>gi|77748087|gb|AAI07619.1| Short stature homeobox [Danio rerio]
Length = 258
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 111 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 165
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 166 KQE------NQMHKGVILGTAS 181
>gi|184299|gb|AAA58665.1| HOX7 [Homo sapiens]
Length = 297
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|88913531|sp|Q2VL85.1|MSX1_CALGO RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370509|gb|AAZ30468.1| msh homeobox 1-like protein [Callimico goeldii]
Length = 297
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|195355156|ref|XP_002044059.1| GM21128 [Drosophila sechellia]
gi|194129312|gb|EDW51355.1| GM21128 [Drosophila sechellia]
Length = 140
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 109 TPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 166
T TP QLQ LE++F Q T P +E+ + +S +SE V WFQNRRA+ +++
Sbjct: 30 TFTPQQLQELEALF-QKTHYPDVFLREEVALRIS----LSEARVQVWFQNRRAKWRKQ 82
>gi|126337098|ref|XP_001362463.1| PREDICTED: short stature homeobox protein-like isoform 2
[Monodelphis domestica]
Length = 311
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 119 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 173
Query: 165 RKQLVSSSANTLHNGGGGGAGA 186
+++ N +H G G +
Sbjct: 174 KQE------NQMHKGVILGTAS 189
>gi|88913537|sp|Q2VL87.1|MSX1_MACMU RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370501|gb|AAZ30466.1| msh homeobox 1-like protein [Macaca mulatta]
Length = 297
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|326919427|ref|XP_003205982.1| PREDICTED: homeobox protein GHOX-7-like, partial [Meleagris
gallopavo]
gi|63498|emb|CAA43924.1| HOX-7 [Gallus gallus]
gi|228515|prf||1805245A Hox7 gene
Length = 142
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 12 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 65
Query: 159 RRARSKR-------------KQLVSSSANTLHNGGGGGAGAGAG--GADSEVE 196
RRA++KR K ++ +A + GG A AGA GA S +
Sbjct: 66 RRAKAKRLQEAELEKLKMAAKPMLPPAAFGISFPLGGPAVAGASLYGASSPFQ 118
>gi|40254714|ref|NP_571325.2| homeobox protein OTX1 B [Danio rerio]
gi|28277468|gb|AAH45290.1| Orthodenticle homolog 1 [Danio rerio]
gi|182888722|gb|AAI64123.1| Otx1 protein [Danio rerio]
Length = 323
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL ILE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDILEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSANT 175
++Q SS T
Sbjct: 95 QQQQSGSSTKT 105
>gi|344235519|gb|EGV91622.1| Homeobox protein MSX-1 [Cricetulus griseus]
Length = 261
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 127 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 180
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 181 RRAKAKRLQ 189
>gi|313233934|emb|CBY10102.1| unnamed protein product [Oikopleura dioica]
Length = 342
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R TP Q++ LES F + ++ VEL+ +SET + WFQNRR + K
Sbjct: 185 RPRTAFTPHQIKTLESEFQKNRYLSVGKR-----VELADSLGLSETQIKIWFQNRRTKWK 239
Query: 165 RKQLVS---SSANTLHNGGGGGAGAGAGGA 191
R+ L S + + G AG AG A
Sbjct: 240 REYLSDWELWSHQSYYAMHGVLAGQAAGSA 269
>gi|3024322|sp|Q91994.1|OTX1B_DANRE RecName: Full=Homeobox protein OTX1 B; Short=zOtx1; AltName:
Full=Orthodenticle homolog 1 B
gi|540242|gb|AAA78900.1| orthodenticle-related protein 1 [Danio rerio]
gi|633131|dbj|BAA05158.1| otx homeoprotein [Danio rerio]
Length = 323
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL ILE++F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDILEALFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQLVSSSANT 175
++Q SS T
Sbjct: 95 QQQQSGSSTKT 105
>gi|56718233|gb|AAW24452.1| CG13424-related protein 1 [Oikopleura dioica]
Length = 305
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R TP Q++ LES F + ++ VEL+ +SET + WFQNRR + K
Sbjct: 167 RPRTAFTPHQIKTLESEFQKNRYLSVGKR-----VELADSLGLSETQIKIWFQNRRTKWK 221
Query: 165 RKQLVS---SSANTLHNGGGGGAGAGAGGA 191
R+ L S + + G AG AG A
Sbjct: 222 REYLSDWELWSHQSYYAMHGVLAGQAAGSA 251
>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
Length = 120
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 89 YCDPLMT-----SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQ 143
+C+ M S G K+ ++R QL+ LE F+ G S +K+ EL++
Sbjct: 7 FCNLEMNGEEEFSDDGSKMGEKKRRLNME-QLKTLEKNFEIGNKLESDRKL-----ELAR 60
Query: 144 HGQISETNVYNWFQNRRARSKRKQL 168
+ + WFQNRRARSK KQL
Sbjct: 61 ALGLQPRQIAIWFQNRRARSKTKQL 85
>gi|345807568|ref|XP_538156.3| PREDICTED: uncharacterized protein LOC481034 [Canis lupus
familiaris]
Length = 367
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVS 170
T VQ+Q LES F Q T P +E L++ ++E V WF+NRRA+ KR + S
Sbjct: 292 TQVQVQELESAF-QHTQYPDVLTRQE----LARRMDVTEIRVQVWFKNRRAKYKRDERAS 346
Query: 171 SSANT 175
NT
Sbjct: 347 KLRNT 351
>gi|88913532|sp|Q2VL84.1|MSX1_CALJA RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370513|gb|AAZ30469.1| msh homeobox 1-like protein [Callithrix jacchus]
Length = 297
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|224080928|ref|XP_002194803.1| PREDICTED: homeobox protein Nkx-6.3 [Taeniopygia guttata]
Length = 260
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
Q+ LE F+Q +K L+ ++E+ V WFQNRR + ++K + S+
Sbjct: 150 QIFALEKTFEQ-----TKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSS 204
Query: 174 NTLHNGGGGGAGAGAGGADSEVETEVD 200
++ GG GG A + D E +D
Sbjct: 205 SSQRAGGSGGERAASETEDDEYNKPLD 231
>gi|395543057|ref|XP_003773439.1| PREDICTED: homeobox protein MSX-1 [Sarcophilus harrisii]
Length = 264
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 132 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 185
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 186 RRAKAKRLQ 194
>gi|119904196|ref|XP_613967.3| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 253
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 115 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 169
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 170 RSASLLKS 177
>gi|27807395|ref|NP_777223.1| homeobox protein MSX-1 [Bos taurus]
gi|3023960|sp|O02786.1|MSX1_BOVIN RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|2190055|dbj|BAA20367.1| Mxs-1 [Bos taurus]
Length = 297
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|344279070|ref|XP_003411314.1| PREDICTED: homeobox protein MSX-1-like [Loxodonta africana]
Length = 297
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQ--KIKEITVELSQHGQISETNVYNWFQ 157
HK + + R T QL LE F Q KQ I E E S ++ET V WFQ
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAE-RAEFSSSLSLTETQVKIWFQ 215
Query: 158 NRRARSKRKQ 167
NRRA++KR Q
Sbjct: 216 NRRAKAKRLQ 225
>gi|323355461|gb|EGA87283.1| Yhp1p [Saccharomyces cerevisiae VL3]
Length = 353
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
+L IL++ FD+ TP+K K +ELS+ +SE +V WFQN+R +K+ + +S
Sbjct: 184 ELGILQTAFDE-CPTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHK---NSG 235
Query: 174 NTLH 177
NT H
Sbjct: 236 NTSH 239
>gi|398366607|ref|NP_010739.3| Yhp1p [Saccharomyces cerevisiae S288c]
gi|73921276|sp|Q04116.1|YHP1_YEAST RecName: Full=Homeobox protein YHP1
gi|927707|gb|AAB64873.1| Ydr451cp [Saccharomyces cerevisiae]
gi|285811462|tpg|DAA12286.1| TPA: Yhp1p [Saccharomyces cerevisiae S288c]
gi|392300568|gb|EIW11659.1| Yhp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 353
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
+L IL++ FD+ TP+K K +ELS+ +SE +V WFQN+R +K+ + +S
Sbjct: 184 ELGILQTAFDE-CPTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHK---NSG 235
Query: 174 NTLH 177
NT H
Sbjct: 236 NTSH 239
>gi|6754756|ref|NP_034966.1| homeobox protein MSX-3 [Mus musculus]
gi|2495284|sp|P70354.1|MSX3_MOUSE RecName: Full=Homeobox protein MSX-3
gi|1470111|gb|AAB49935.1| similar to the Drosophila melanogaster muscle segment homeobox
(msh) protein encoded by GenBank Accession Number U33319
[Mus musculus]
gi|3094003|gb|AAC15459.1| homeobox protein MSX3 [Mus musculus]
gi|148685945|gb|EDL17892.1| homeobox, msh-like 3, isoform CRA_a [Mus musculus]
gi|187950709|gb|AAI37579.1| Msx3 protein [Mus musculus]
gi|187953603|gb|AAI37578.1| Msx3 protein [Mus musculus]
Length = 204
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 84 HKTNRKPRTPFTTAQLLALERKFHQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 137
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 138 RRAKAKRLQ 146
>gi|3650208|dbj|BAA33410.1| LjOtxB [Lethenteron camtschaticum]
Length = 316
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL ILES+F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 38 RERTTFTRAQLDILESLFSK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 92
Query: 165 R-------KQLVSSSANTLHNGGGGGAGAGAGG 190
+ K + + + G + AG+GG
Sbjct: 93 QQHNAAQNKARPAKKKISPRDSNAGDSSAGSGG 125
>gi|28189825|dbj|BAC56527.1| similar to Homeobox protein MSX-1 [Bos taurus]
Length = 95
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
HK + + R T QL LE F Q ++ E S ++ET V WFQNR
Sbjct: 8 HKTNRKPRTPFTTAQLLALERKFRQKQYLSIAER-----AEFSSSLSLTETQVKIWFQNR 62
Query: 160 RARSKRKQ 167
RA++KR Q
Sbjct: 63 RAKAKRLQ 70
>gi|410956224|ref|XP_003984743.1| PREDICTED: homeobox protein Nkx-2.6 [Felis catus]
Length = 244
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 98 GGHKISARQRWTP----TPVQLQILESIFDQG--TGTPSKQKIKEITVELSQHGQISETN 151
G + ARQR P + Q+ LE F Q P ++ L+ + +++ET
Sbjct: 125 GPEQPKARQRRKPRVLFSQAQVLALERRFKQQRYVSAPERE-------HLASNLKLTETQ 177
Query: 152 VYNWFQNRRARSKRKQLVS 170
V WFQNRR ++KRKQL S
Sbjct: 178 VKIWFQNRRYKTKRKQLTS 196
>gi|392597820|gb|EIW87142.1| hypothetical protein CONPUDRAFT_69445 [Coniophora puteana
RWD-64-598 SS2]
Length = 715
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 95 TSGGGHKISA--RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNV 152
T GG K S+ + R +P QL L +FDQ ++ E EL++ + V
Sbjct: 67 TVGGSDKASSSKKPRHRHSPAQLAALNELFDQ-----NEHPSLEDRTELAERLGMETKTV 121
Query: 153 YNWFQNRRARS-KRKQLVSSSANTLHNGGGGGAGAGAG 189
WFQN+RA + KR + ++SA L + AG+G
Sbjct: 122 NAWFQNKRASTKKRNRAPANSAQPLQPVPDSNSDAGSG 159
>gi|359070691|ref|XP_002691720.2| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 252
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 114 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 168
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 169 RSASLLKS 176
>gi|323305360|gb|EGA59105.1| Yhp1p [Saccharomyces cerevisiae FostersB]
gi|323309566|gb|EGA62775.1| Yhp1p [Saccharomyces cerevisiae FostersO]
Length = 353
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
+L IL++ FD+ TP+K K +ELS+ +SE +V WFQN+R +K+ + +S
Sbjct: 184 ELGILQTAFDE-CPTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHK---NSG 235
Query: 174 NTLH 177
NT H
Sbjct: 236 NTSH 239
>gi|190339071|gb|AAI62557.1| Hesx1 protein [Danio rerio]
Length = 161
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 102 ISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
I R R + VQ++ILES+F Q P +I EL++ + E + WFQNRRA
Sbjct: 79 IGRRPRTAFSSVQIKILESVF-QVNSYPGI----DIREELAKKLHLDEDRIQIWFQNRRA 133
Query: 162 RSKR 165
+ KR
Sbjct: 134 KLKR 137
>gi|151942416|gb|EDN60772.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190404624|gb|EDV07891.1| homeobox protein YHP1 [Saccharomyces cerevisiae RM11-1a]
gi|207346260|gb|EDZ72808.1| YDR451Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273650|gb|EEU08577.1| Yhp1p [Saccharomyces cerevisiae JAY291]
Length = 353
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
+L IL++ FD+ TP+K K +ELS+ +SE +V WFQN+R +K+ + +S
Sbjct: 184 ELGILQTAFDE-CPTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHK---NSG 235
Query: 174 NTLH 177
NT H
Sbjct: 236 NTSH 239
>gi|397491159|ref|XP_003816541.1| PREDICTED: homeobox protein MSX-1, partial [Pan paniscus]
Length = 249
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 115 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 168
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 169 RRAKAKRLQ 177
>gi|349577495|dbj|GAA22664.1| K7_Yhp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 353
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
+L IL++ FD+ TP+K K +ELS+ +SE +V WFQN+R +K+ + +S
Sbjct: 184 ELGILQTAFDE-CPTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHK---NSG 235
Query: 174 NTLH 177
NT H
Sbjct: 236 NTSH 239
>gi|23592228|ref|NP_703149.1| homeobox protein ESX1 [Homo sapiens]
gi|116241356|sp|Q8N693.3|ESX1_HUMAN RecName: Full=Homeobox protein ESX1; AltName: Full=Extraembryonic,
spermatogenesis, homeobox 1; Contains: RecName:
Full=Homeobox protein ESX1-N; Contains: RecName:
Full=Homeobox protein ESX1-C
gi|21629646|gb|AAM62141.1| ESX1L [Homo sapiens]
gi|119623160|gb|EAX02755.1| extraembryonic, spermatogenesis, homeobox 1 homolog (mouse) [Homo
sapiens]
Length = 406
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T QLQ LE+ FD+ + P + + L+ ++E V WFQNRRA+ K
Sbjct: 141 RRRTAFTQFQLQELENFFDE-SQYPDVVARERLAARLN----LTEDRVQVWFQNRRAKWK 195
Query: 165 RKQLVSSSANT 175
R Q V NT
Sbjct: 196 RNQRVLMLRNT 206
>gi|31566395|gb|AAH53599.1| ESX homeobox 1 [Homo sapiens]
gi|54611484|gb|AAH42633.1| ESX homeobox 1 [Homo sapiens]
Length = 406
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T QLQ LE+ FD+ + P + + L+ ++E V WFQNRRA+ K
Sbjct: 141 RRRTAFTQFQLQELENFFDE-SQYPDVVARERLAARLN----LTEDRVQVWFQNRRAKWK 195
Query: 165 RKQLVSSSANT 175
R Q V NT
Sbjct: 196 RNQRVLMLRNT 206
>gi|444708491|gb|ELW49554.1| Homeobox protein MIXL1 [Tupaia chinensis]
Length = 253
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 92 PLMTSGGGH----KISARQRWTPTPVQLQILESIFDQGTGTPS---KQKIKEITVELSQH 144
P G H K++ + + TP QLQ+LE +F + T P ++++ +T+
Sbjct: 92 PTFLKGAFHSFQGKVACQDQNLRTPEQLQLLELVFRR-TKYPDIHLRERLAALTL----- 145
Query: 145 GQISETNVYNWFQNRRARSKRK 166
+ E+ + WFQNRRA+S+R+
Sbjct: 146 --LPESRIQVWFQNRRAKSRRQ 165
>gi|301758840|ref|XP_002915282.1| PREDICTED: paired mesoderm homeobox protein 2-like [Ailuropoda
melanoleuca]
Length = 202
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 64 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 118
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 119 RSASLLKS 126
>gi|431902728|gb|ELK09016.1| Short stature homeobox protein [Pteropus alecto]
Length = 178
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 43 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 97
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 98 KQE------NQMHKG 106
>gi|88913540|sp|Q2VL76.1|MSX1_PROVC RecName: Full=Homeobox protein MSX-1; AltName: Full=Msh homeobox
1-like protein
gi|71370537|gb|AAZ30475.1| msh homeobox 1-like protein [Propithecus coquereli]
Length = 297
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 163 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 216
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 217 RRAKAKRLQ 225
>gi|156405507|ref|XP_001640773.1| predicted protein [Nematostella vectensis]
gi|156227909|gb|EDO48710.1| predicted protein [Nematostella vectensis]
Length = 64
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 105 RQRWTPTPVQLQILESIFDQG---TGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA 161
R R TP QL LE+ F++ GT KQ L+ + +SET + WFQNRR
Sbjct: 3 RIRTAFTPTQLLHLENAFEKNHYIVGTERKQ--------LASYLNLSETQIKVWFQNRRT 54
Query: 162 RSKRKQ 167
+ KR+Q
Sbjct: 55 KWKRQQ 60
>gi|73951854|ref|XP_545946.2| PREDICTED: homeobox protein MSX-1 [Canis lupus familiaris]
Length = 236
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 102 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 155
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 156 RRAKAKRLQ 164
>gi|363737425|ref|XP_003641845.1| PREDICTED: short stature homeobox protein 2-like [Gallus gallus]
Length = 346
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSA 173
QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ ++++
Sbjct: 165 QLNELERLFDE-THYPDA----FMREELSQRLGLSEARVQVWFQNRRAKCRKQE------ 213
Query: 174 NTLHNG 179
N LH G
Sbjct: 214 NQLHKG 219
>gi|344296011|ref|XP_003419703.1| PREDICTED: homeobox protein MSX-3-like [Loxodonta africana]
Length = 211
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 47/114 (41%), Gaps = 24/114 (21%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S +++ET V WFQN
Sbjct: 87 HKSNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLRLTETQVKIWFQN 140
Query: 159 RRARSKR-------------KQLVSSSANTL----HNGGGGGAGAGAGGADSEV 195
RRA++KR K L+ S A H G G GA GA V
Sbjct: 141 RRAKAKRLQEAELEKLKLAAKPLLPSLALPFALGAHLQGSPGPYGGAAGALPTV 194
>gi|302680148|ref|XP_003029756.1| hypothetical protein SCHCODRAFT_257987 [Schizophyllum commune H4-8]
gi|300103446|gb|EFI94853.1| hypothetical protein SCHCODRAFT_257987 [Schizophyllum commune H4-8]
Length = 723
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ R T VQL++LE IF T P+ ++ V+L +++ V WFQNRRA+ K
Sbjct: 80 KHRRRTTAVQLKVLEGIFKTET-KPNAALRNKLAVQL----EMTARGVQVWFQNRRAKEK 134
Query: 165 RKQLVSSSA 173
K +S A
Sbjct: 135 LKASKASKA 143
>gi|393217409|gb|EJD02898.1| hypothetical protein FOMMEDRAFT_140712 [Fomitiporia mediterranea
MF3/22]
Length = 933
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ R T QL++LE F + T P+ K++ +L +++ V WFQNRRA+ K
Sbjct: 103 KHRKRTTRPQLKVLEDTFKRET-KPNAALRKQLAAQL----EMTPRGVQVWFQNRRAKEK 157
Query: 165 R--KQLVSSSAN 174
K+ SSSAN
Sbjct: 158 TLAKKAASSSAN 169
>gi|224050123|ref|XP_002196215.1| PREDICTED: homeobox protein GHOX-7-like [Taeniopygia guttata]
Length = 230
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 100 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 153
Query: 159 RRARSKR-------------KQLVSSSANTLHNGGGGGAGAGAG--GADSEVE 196
RRA++KR K ++ +A + GG A AGA GA S +
Sbjct: 154 RRAKAKRLQEAELEKLKMAAKPMLPPAAFGISFPLGGPAVAGASLYGASSPFQ 206
>gi|358332007|dbj|GAA50740.1| zinc finger protein 2 [Clonorchis sinensis]
Length = 1421
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 95 TSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYN 154
T+ G+ + R R + T +Q + + +I+ TPS + + + +S V
Sbjct: 1249 TAMAGNIGTRRNRTSITVLQSRCMHAIYTHH-KTPSVHECDRLGATIG----LSRRVVQV 1303
Query: 155 WFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGA-----GGADSEVETEVDSLLLH 205
WFQN+RA+ K+ VSS+ G GAGA A GGAD V T V+ H
Sbjct: 1304 WFQNQRAKEKKMARVSSTY-------GAGAGANAIQLRNGGAD--VVTHVEPTFCH 1350
>gi|348512563|ref|XP_003443812.1| PREDICTED: homeobox-containing protein 1-like [Oreochromis
niloticus]
Length = 482
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 81 AGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT-- 138
AG R G + GG ++ R+T I+ES F + P + K +EI
Sbjct: 304 AGDRAGIV--------GGPLRLRRGSRFTWRKECQSIMESFFMENQ-YPDEAKREEIANA 354
Query: 139 ---------VELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAG 189
+LS+ +++ VYNWF NRR KR+ + ++ H +
Sbjct: 355 CNSVIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSN 414
Query: 190 GADSEVETEVDSLLLHDEHKTTKPENLSSAHSTSQ--PQHLRNLP----PTPRP 237
G + E++ D + H+ ++ E+ SS Q P L + P+PRP
Sbjct: 415 GEEGEMQEFTDQV----NHRFSEQEDTSSQRIVDQQDPASLASTEVAALPSPRP 464
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C + GG K R R T T QL LE F++ + P +E+ ++++ + E
Sbjct: 78 CGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPE 132
Query: 150 TNVYNWFQNRRARSKRKQLVSSS 172
V WFQNRRA+ +R++ + ++
Sbjct: 133 VRVQVWFQNRRAKWRRQEKMEAA 155
>gi|324524970|gb|ADY48490.1| Homeobox protein vab-15, partial [Ascaris suum]
Length = 248
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 140 ELSQHGQISETNVYNWFQNRRARSKRKQ 167
E S Q++ET V WFQNRRA+SKR Q
Sbjct: 185 EFSASLQLTETQVKIWFQNRRAKSKRLQ 212
>gi|284026526|gb|ADB66163.1| Otx-like protein 1 [Aurelia sp. 1 NN-2010a]
Length = 104
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISE 149
PL S + R+R T T QL+ILE +F SK +I + E+++ + E
Sbjct: 32 PLAPSCAFPRKQRRERTTFTKAQLEILEDLF-------SKTHYPDIFMREEVARKINLPE 84
Query: 150 TNVYNWFQNRRARSKRK 166
+ V WF+NRRA+ ++K
Sbjct: 85 SRVQVWFKNRRAKHRQK 101
>gi|296482154|tpg|DAA24269.1| TPA: paired related homeobox 2-like [Bos taurus]
Length = 263
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 125 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 179
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 180 RSASLLKS 187
>gi|432945301|ref|XP_004083530.1| PREDICTED: homeobox protein Mix.1-like [Oryzias latipes]
Length = 335
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE--LSQHGQISETNVYNWFQNRRAR 162
R+R T Q+Q+LE ++ S K +I + L + E+ + WFQNRRA+
Sbjct: 63 RKRTNFTQQQIQVLEKVY-------SDTKYPDIYLRERLEALTGLPESRIQVWFQNRRAK 115
Query: 163 SKRKQLVSSSANTLHNGGGG 182
S+R+ V SS + + N GG
Sbjct: 116 SRRQ--VGSSVSKVSNTPGG 133
>gi|391332001|ref|XP_003740427.1| PREDICTED: uncharacterized protein LOC100907929 [Metaseiulus
occidentalis]
Length = 513
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T +P QL++LE F++ + + L+ +SE V WF NRRA+ +
Sbjct: 355 RNRTTFSPEQLEVLEEEFEK-----THYPCVDTRERLASKTGLSEARVQVWFSNRRAKWR 409
Query: 165 RKQLVSSSANTLHNGGGG 182
R Q + N+L N GG
Sbjct: 410 RHQRM----NSLGNPKGG 423
>gi|357616186|gb|EHJ70056.1| homeobrain [Danaus plexippus]
Length = 261
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 91 DPL--MTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQIS 148
+PL + +G K+ R R T T QL LE FD+ T P +E+ + L +S
Sbjct: 70 EPLEALDAGRPRKVR-RSRTTFTTYQLHELERAFDK-TQYPDVFTREELALRLD----LS 123
Query: 149 ETNVYNWFQNRRA--RSKRKQLVSSSANTLHN 178
E V WFQNRRA R + K L A LH+
Sbjct: 124 EARVQVWFQNRRAKWRKREKALGREHAPFLHH 155
>gi|348516743|ref|XP_003445897.1| PREDICTED: homeobox protein MSX-2-like [Oreochromis niloticus]
Length = 246
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 91 DPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
P + S HK + + R T +QL LE F Q ++ E S +SET
Sbjct: 105 SPAVCSLRKHKTNRKPRTPFTTMQLLALERKFRQKQYLSIAER-----AEFSSSLSLSET 159
Query: 151 NVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGA 184
V WFQNRRA++KR Q L G G A
Sbjct: 160 QVKIWFQNRRAKAKRLQEAEVEKLKLAAGVGSKA 193
>gi|312371612|gb|EFR19750.1| hypothetical protein AND_21856 [Anopheles darlingi]
Length = 234
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G K R R + T Q+ LE IF++ T P ++E EL++ +SE V WF
Sbjct: 43 SGSSKKPRRTRTSFTSQQILALEKIFER-THYPDA-FVRE---ELAKENSLSEARVQVWF 97
Query: 157 QNRRARSKRKQ 167
QNRRA+ +R +
Sbjct: 98 QNRRAKFRRNE 108
>gi|308220044|gb|ADO22594.1| ANTP class homeobox transcription factor ANTP19 [Mnemiopsis leidyi]
gi|308220056|gb|ADO22600.1| ANTP class homeobox transcription factor ANTP47 [Mnemiopsis leidyi]
Length = 1583
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 88 IYCDPLMTSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEIT--VELSQH 144
I+ P T G + R+ R + QLQ LE F QK + +EL+
Sbjct: 818 IFAPPFRTDLSGRPLRRRKARTVFSDDQLQGLERKF-------KIQKYLSVPERMELAGM 870
Query: 145 GQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAG 185
+SET V WFQNRR + K++ L + S+ + HN G
Sbjct: 871 LSLSETQVKTWFQNRRMKWKKQGLGAISSTSPHNSNKNSPG 911
>gi|356567036|ref|XP_003551729.1| PREDICTED: homeobox-leucine zipper protein ATHB-20-like [Glycine
max]
Length = 268
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
Q++ LE FDQG ++K V+L++ + V WFQNRRAR K KQL
Sbjct: 87 QVKALEKSFDQGNKLEPERK-----VQLAKALGLQPRQVAIWFQNRRARWKTKQL 136
>gi|307209263|gb|EFN86359.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 424
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 113 VQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSS 172
QL+ LE F++ P E+ + LS +SET V WFQNRRA+ ++K+ +
Sbjct: 167 FQLEELERAFERAP-YPDVFARDELAMRLS----LSETRVQVWFQNRRAKWRKKEPPRKT 221
Query: 173 ANTLHNGGGGGAGAGAGGADSEVETEVDSL 202
A + G A G G+ + + ++
Sbjct: 222 AGYM---AAGSASPGLSGSFTSLNNTLNPF 248
>gi|2506530|sp|Q03357.2|MSXA_DANRE RecName: Full=Homeobox protein MSH-A
gi|608509|gb|AAA99705.1| homeodomain protein [Danio rerio]
Length = 257
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
P + HK + + R T QL LE F Q ++ E S ++ET
Sbjct: 111 PTICPLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAER-----AEFSSSLSLTETQ 165
Query: 152 VYNWFQNRRARSKRKQ 167
V WFQNRRA++KR Q
Sbjct: 166 VKIWFQNRRAKAKRLQ 181
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C + GG K R R T T QL LE F++ + P +E+ ++++ + E
Sbjct: 78 CGDDINGNGGKKKHRRNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPE 132
Query: 150 TNVYNWFQNRRARSKRKQLVSSS 172
V WFQNRRA+ +R++ + ++
Sbjct: 133 VRVQVWFQNRRAKWRRQEKMEAA 155
>gi|256078302|ref|XP_002575435.1| homeobox protein Msx [Schistosoma mansoni]
gi|360043349|emb|CCD78762.1| msx family homeobox protein [Schistosoma mansoni]
Length = 272
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
HK + R R T QL LE F Q ++ E S ++ET V WFQNR
Sbjct: 152 HKPNRRPRTPFTTQQLLALERKFRQKQYLSIAER-----AEFSNKLTLTETQVKIWFQNR 206
Query: 160 RARSKRKQLVSS 171
RA++KR Q V +
Sbjct: 207 RAKAKRLQEVET 218
>gi|395844588|ref|XP_003795040.1| PREDICTED: paired mesoderm homeobox protein 2 [Otolemur garnettii]
Length = 265
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 127 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 181
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 182 RSASLLKS 189
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 145 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 199
Query: 165 RKQLVSSSANTLHNG 179
R++ + +S LH+
Sbjct: 200 RQEKMDASTMKLHDS 214
>gi|403287046|ref|XP_003934772.1| PREDICTED: uncharacterized protein LOC101033508 [Saimiri
boliviensis boliviensis]
Length = 883
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 749 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 802
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 803 RRAKAKRLQ 811
>gi|363740620|ref|XP_415476.3| PREDICTED: paired mesoderm homeobox protein 2 [Gallus gallus]
Length = 247
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 109 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 163
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 164 RSASLLKS 171
>gi|431898898|gb|ELK07268.1| Paired mesoderm homeobox protein 2 [Pteropus alecto]
Length = 207
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 69 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 123
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 124 RSASLLKS 131
>gi|340709062|ref|XP_003393134.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein otx5-B-like
[Bombus terrestris]
Length = 335
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISE 149
P T G + R+R T T QL +LE +F SK K +I + E++ + E
Sbjct: 75 PGCTPAGNPRKQRRERTTFTRAQLDVLEGLF-------SKTKYPDIFMREEVAMKINLPE 127
Query: 150 TNVYNWFQNRRARSK 164
+ V WF+NRRA+ +
Sbjct: 128 SRVQVWFKNRRAKCR 142
>gi|356991264|ref|NP_001239361.1| uncharacterized protein LOC551357 [Apis mellifera]
gi|380014237|ref|XP_003691146.1| PREDICTED: homeobox protein OTX2-B-like [Apis florea]
gi|354549214|gb|AER27697.1| orthodenticle 2 [Apis mellifera]
Length = 335
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISE 149
P T G + R+R T T QL +LE +F SK K +I + E++ + E
Sbjct: 75 PGCTPAGNPRKQRRERTTFTRAQLDVLEGLF-------SKTKYPDIFMREEVAMKINLPE 127
Query: 150 TNVYNWFQNRRARSK 164
+ V WF+NRRA+ +
Sbjct: 128 SRVQVWFKNRRAKCR 142
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 90 CDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISE 149
C + GG K R R T T QL LE F++ + P +E+ ++++ + E
Sbjct: 78 CGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPE 132
Query: 150 TNVYNWFQNRRARSKRKQLVSSS 172
V WFQNRRA+ +R++ + ++
Sbjct: 133 VRVQVWFQNRRAKWRRQEKMEAA 155
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL+ LE F Q T P +E+ + L ++E V WFQNRRA+ +
Sbjct: 164 RYRTTFTSYQLEELERAF-QKTHYPDVFTREELAMRLD----LTEARVQVWFQNRRAKWR 218
Query: 165 RKQLVSSSANT--LHNGGGGGAG 185
+++ V +T LH G A
Sbjct: 219 KREKVGVQPHTLSLHYSGAPPAA 241
>gi|5081330|gb|AAD39349.1|AF085283_1 hox2 protein [Nematostella vectensis]
Length = 214
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 91 DPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
DP S GG+ S R R T +QL LE F Q ++I +++ +SE
Sbjct: 116 DPDSPSRGGNSRSKRIRTAYTSMQLLELEKEFSQNRYLSRLRRI-----QIAALLDLSEK 170
Query: 151 NVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGAD 192
V WFQNRR + K+ + + T + A G D
Sbjct: 171 QVKIWFQNRRVKWKKDKKAAQHGTTTETSSCPSSPASTGRMD 212
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 170 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 224
Query: 165 RKQLVSSSANTLHNGG 180
R++ + +++ LH+
Sbjct: 225 RQEKMDNTSMKLHDSA 240
>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
[Brachypodium distachyon]
Length = 858
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP Q+Q LE++F + KQ++ ELS+ + V WFQNRR + K+ Q+
Sbjct: 127 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQI 179
>gi|326930336|ref|XP_003211303.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2-like [Meleagris gallopavo]
Length = 247
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 109 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 163
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 164 RSASLLKS 171
>gi|307198548|gb|EFN79433.1| Homeobox protein OTX1 [Harpegnathos saltator]
Length = 335
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISE 149
P T G + R+R T T QL +LE +F SK K +I + E++ + E
Sbjct: 75 PGCTPAGNPRKQRRERTTFTRAQLDVLEGLF-------SKTKYPDIFMREEVAMKINLPE 127
Query: 150 TNVYNWFQNRRARSK 164
+ V WF+NRRA+ +
Sbjct: 128 SRVQVWFKNRRAKCR 142
>gi|168824488|gb|ACA30544.1| orthodenticle [Ceratitis capitata]
Length = 505
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LE++F + T P +E+ +++ + E+ V WF+NRRA+ +
Sbjct: 69 RERTTFTRAQLDVLEALFGK-TRYPDIFMREEVALKI----NLPESRVQVWFKNRRAKCR 123
Query: 165 RKQLVSSSANTL 176
++ N+L
Sbjct: 124 QQLQQQQQTNSL 135
>gi|392593537|gb|EIW82862.1| hypothetical protein CONPUDRAFT_136090 [Coniophora puteana
RWD-64-598 SS2]
Length = 743
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
+ R T QL++LE++F T P K KE+ EL ++ V WFQNRRA+ K
Sbjct: 27 KHRKRTTTAQLEVLEAVFSTET-KPCLAKRKELADELG----MNMRGVQVWFQNRRAKQK 81
>gi|384486940|gb|EIE79120.1| hypothetical protein RO3G_03825 [Rhizopus delemar RA 99-880]
Length = 434
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARS 163
R+R T QL +LE F SK + +L++ Q+SE ++ WFQNRRA+
Sbjct: 26 VRKRTRATADQLSVLEDTFAMNVSPNSK-----LRKQLAEQLQMSERSIQIWFQNRRAKV 80
Query: 164 KRKQ 167
K Q
Sbjct: 81 KHMQ 84
>gi|350579710|ref|XP_003122277.3| PREDICTED: paired mesoderm homeobox protein 2-like [Sus scrofa]
Length = 381
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 213 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 267
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 268 RSASLLKS 275
>gi|345806252|ref|XP_548419.3| PREDICTED: paired mesoderm homeobox protein 2 [Canis lupus
familiaris]
Length = 214
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 76 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 130
Query: 171 SSANTLHN 178
SA L +
Sbjct: 131 RSATLLKS 138
>gi|260810917|ref|XP_002600169.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
gi|229285455|gb|EEN56181.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
Length = 64
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QLQ LE +F++ T P + EL++ +SE V WFQNRRA+ +
Sbjct: 6 RNRTTFTSQQLQALEKVFER-THYPDAF----VREELARRVNLSEARVQVWFQNRRAKFR 60
Query: 165 RKQ 167
R +
Sbjct: 61 RNE 63
>gi|354468499|ref|XP_003496690.1| PREDICTED: homeobox protein MSX-1-like [Cricetulus griseus]
Length = 378
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 244 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 297
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 298 RRAKAKRLQ 306
>gi|297292274|ref|XP_001118871.2| PREDICTED: homeobox protein MSX-1-like [Macaca mulatta]
Length = 530
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 396 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 449
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 450 RRAKAKRLQ 458
>gi|156397207|ref|XP_001637783.1| predicted protein [Nematostella vectensis]
gi|156224898|gb|EDO45720.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 91 DPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
DP S GG+ S R R T +QL LE F Q ++I +I L +SE
Sbjct: 111 DPDSPSRGGNSRSKRIRTAYTSMQLLELEKEFSQNRYLSRLRRI-QIAALL----DLSEK 165
Query: 151 NVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGAD 192
V WFQNRR + K+ + + T + A G D
Sbjct: 166 QVKIWFQNRRVKWKKDKKAAQHGTTTETSSCPSSPASTGRMD 207
>gi|259013247|ref|NP_001158368.1| brain-specific homeobox [Saccoglossus kowalevskii]
gi|196123797|gb|ACG70187.1| brain-specific homeobox protein [Saccoglossus kowalevskii]
Length = 233
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFD--QGTGTPSKQKIKEITVELSQHGQISETNVY 153
S G H + R + QL LE F+ + TP + VEL+ +SET V
Sbjct: 100 SPGKHCRRRKARTVFSDQQLNGLEKRFEAQRYLSTPER-------VELATSLSLSETQVK 152
Query: 154 NWFQNRRARSKRKQLVSSSANT 175
WFQNRR + K++Q S+S T
Sbjct: 153 TWFQNRRMKHKKQQKKSTSNQT 174
>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
Full=GLABRA 2-like homeobox protein 6; AltName:
Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
transcription factor ROC6; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 6
Length = 872
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP Q+Q LE++F + KQ++ ELS+ + V WFQNRR + K+ Q+
Sbjct: 130 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQI 182
>gi|126297823|ref|XP_001369196.1| PREDICTED: paired mesoderm homeobox protein 2-like [Monodelphis
domestica]
Length = 262
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 124 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 178
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 179 RSASLLKS 186
>gi|18396130|ref|NP_564268.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
gi|75155843|sp|Q8LFD3.1|ATB23_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-23; AltName:
Full=HD-ZIP protein ATHB-23; AltName: Full=Homeodomain
transcription factor ATHB-23
gi|21537134|gb|AAM61475.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|32815953|gb|AAP88361.1| At1g26960 [Arabidopsis thaliana]
gi|110736089|dbj|BAF00017.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332192643|gb|AEE30764.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
Length = 255
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G K+ ++R QL+ LE F+ G S +K+ EL++ + + W
Sbjct: 62 SDDGSKMGEKKRRLNME-QLKALEKDFELGNKLESDRKL-----ELARALGLQPRQIAIW 115
Query: 156 FQNRRARSKRKQL 168
FQNRRARSK KQL
Sbjct: 116 FQNRRARSKTKQL 128
>gi|195449567|ref|XP_002072128.1| GK22678 [Drosophila willistoni]
gi|194168213|gb|EDW83114.1| GK22678 [Drosophila willistoni]
Length = 476
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 141 LSQHGQISETNVYNWFQNRRARSKRKQLVS-----SSANTLHNGGGGGAGAGAGGADSEV 195
L+Q +SET V WFQNRR + KR Q SS +HNG G D +
Sbjct: 404 LAQSLNLSETQVKVWFQNRRTKHKRMQQEDEKGGGSSDRNMHNGSGD------EDDDELI 457
Query: 196 ETEVDSLLLHDEHK 209
+ E+D +EH+
Sbjct: 458 DMEMDDCPSDEEHE 471
>gi|119918249|ref|XP_605772.3| PREDICTED: homeobox protein Nkx-6.3-like [Bos taurus]
Length = 137
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 99 GHKISARQRWTPTPVQLQI--LESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G+ I ++ PT QI LE F+Q ++ + L+ ++E+ V WF
Sbjct: 7 GNSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERAR-----LAYSLGMTESQVKVWF 61
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEVETEVD 200
QNRR + ++K + S++T G AGAGG + ETE D
Sbjct: 62 QNRRTKWRKKSALEPSSSTPRAPG----SAGAGGERAASETEDD 101
>gi|17511149|ref|NP_490823.1| Protein CEH-45 [Caenorhabditis elegans]
gi|351064758|emb|CCD73241.1| Protein CEH-45 [Caenorhabditis elegans]
Length = 229
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 81 AGGRLGNIYCDPLMTSGGG-----HKISARQRWTPTPV---QLQILESIFDQGTGTPSKQ 132
A ++ C PLM H S R+R T QL ILE+ F T P
Sbjct: 79 ANYPFFSMLCGPLMPPFMAPYHHQHYASRRKRRHRTIFSEEQLNILETTFS-TTHYPDAT 137
Query: 133 KIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGG 182
+E+ V+ S + E V WF+NRRA+ +RKQ S + H+G
Sbjct: 138 TREELAVQCS----LKEERVEVWFKNRRAK-ERKQKKDDSRTSKHSGDDS 182
>gi|57545777|gb|AAW51825.1| PITX2 [Paracentrotus lividus]
Length = 318
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 98 GGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISETNVYNW 155
G K + RQR T QLQ LE+ F S+ + +++ E+S ++ET V W
Sbjct: 83 GKKKRTRRQRTHFTSQQLQELEANF-------SRNRYPDLSTREEISAWCNLTETRVRVW 135
Query: 156 FQNRRARSKRKQLVSSSANTLHNGGGGG 183
F+NRRA+ ++++ + + L NG G G
Sbjct: 136 FKNRRAKWRKRE--RNQLHELKNGLGAG 161
>gi|351695314|gb|EHA98232.1| Homeobox-containing protein 1 [Heterocephalus glaber]
Length = 381
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEIT-----------VE 140
P+ + G ++ R+T L ++ES F++ P + K +EI +
Sbjct: 219 PVSATPGTFRLRRGSRFTWRKECLAVMESYFNENQ-YPDEAKREEIANACNAVIQKPGKK 277
Query: 141 LSQHGQISETNVYNWFQNRRARSKRK---QLVSSSANTLHNGGGGGAGAGAGGADSEVET 197
LS +++ VYNWF NRR KR+ ++ S + + GG G D +
Sbjct: 278 LSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGHSNSDDVDGNDY---S 334
Query: 198 EVDSLLLHDEHK 209
E D + H +H+
Sbjct: 335 EQDDSMSHSDHQ 346
>gi|307177466|gb|EFN66593.1| Short stature homeobox protein 2 [Camponotus floridanus]
Length = 196
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 97 GGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWF 156
G G+ R R T QL LE +FD+ T P + ELSQ +SE V WF
Sbjct: 3 GNGNGKQRRSRTNFTIEQLAELERLFDE-THYPDA----FMREELSQRLGLSEARVQVWF 57
Query: 157 QNRRARSKRKQLVSSSANTLHNGGGG 182
QNRRA+ ++ + + LH G G
Sbjct: 58 QNRRAKCRKHE------SQLHKGVAG 77
>gi|282154797|ref|NP_446164.1| homeo box, msh-like 3 [Rattus norvegicus]
gi|149061458|gb|EDM11881.1| rCG48500, isoform CRA_b [Rattus norvegicus]
Length = 204
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 84 HKTNRKPRTPFTTAQLLALERKFHQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 137
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 138 RRAKAKRLQ 146
>gi|37147908|gb|AAQ88401.1| HD-ZIP [Capsicum annuum]
Length = 220
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
T Q+++LES+F GT ++K+ +L++ + V WFQN+RAR K KQL
Sbjct: 28 TDEQVKLLESMFKLGTKIEPREKL-----QLARDLGLQPRQVAIWFQNKRARWKSKQL 80
>gi|402868918|ref|XP_003898528.1| PREDICTED: homeobox protein MSX-1 [Papio anubis]
Length = 291
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 83 GRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVEL 141
GRL C + HK + + R T QL LE F Q KQ + E
Sbjct: 145 GRLSPPAC-----TLRKHKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEF 193
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQ 167
S ++ET V WFQNRRA++KR Q
Sbjct: 194 SSSLSLTETQVKIWFQNRRAKAKRLQ 219
>gi|149061457|gb|EDM11880.1| rCG48500, isoform CRA_a [Rattus norvegicus]
Length = 228
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 108 HKTNRKPRTPFTTAQLLALERKFHQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 161
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 162 RRAKAKRLQ 170
>gi|327286855|ref|XP_003228145.1| PREDICTED: homeobox protein not2-like [Anolis carolinensis]
Length = 129
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
PL GG R R TP QL+ LE F + + + V+L+ + ++ET
Sbjct: 29 PLPWRPGGPCKMKRVRTVFTPEQLERLEKEFLK-----QQYMVGTERVDLAANLHLTETQ 83
Query: 152 VYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEV 195
V WFQNRR + +++ L A G G D EV
Sbjct: 84 VKVWFQNRRIKWRKQSLEQKEAKRAPRGTTTPTTVAGGENDIEV 127
>gi|432941475|ref|XP_004082868.1| PREDICTED: homeobox protein EMX1-like [Oryzias latipes]
Length = 134
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 74 AHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQK 133
A ++ AA G L D L+ G + R R +P QL LE F++ ++
Sbjct: 10 AWENRAAMGSELSQ---DGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAER 66
Query: 134 IKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
K++ LS +SET V WFQNRR + KR++L
Sbjct: 67 -KQLAGSLS----LSETQVKVWFQNRRTKYKRQKL 96
>gi|350419186|ref|XP_003492099.1| PREDICTED: homeobox protein otx5-B-like [Bombus impatiens]
Length = 335
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQHGQISE 149
P T G + R+R T T QL +LE +F SK K +I + E++ + E
Sbjct: 75 PGCTPAGNPRKQRRERTTFTRAQLDVLEGLF-------SKTKYPDIFMREEVAMKINLPE 127
Query: 150 TNVYNWFQNRRARSK 164
+ V WF+NRRA+ +
Sbjct: 128 SRVQVWFKNRRAKCR 142
>gi|327278914|ref|XP_003224204.1| PREDICTED: homeobox protein MSX-1-like [Anolis carolinensis]
Length = 338
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEI-TVELSQHGQISETNVYNWFQN 158
HK + + R T QL LE F Q KQ + E S ++ET V WFQN
Sbjct: 202 HKTNRKPRTPFTTAQLLALERKFRQ------KQYLSIAERAEFSSSLSLTETQVKIWFQN 255
Query: 159 RRARSKRKQ 167
RRA++KR Q
Sbjct: 256 RRAKAKRLQ 264
>gi|11877290|emb|CAC19028.1| homeobox transcription factor [Platynereis dumerilii]
Length = 205
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LES+F Q T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 71 RERTTFTRAQLDVLESLF-QKTRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 125
Query: 165 RKQ 167
++Q
Sbjct: 126 QQQ 128
>gi|281349486|gb|EFB25070.1| hypothetical protein PANDA_003237 [Ailuropoda melanoleuca]
Length = 170
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 32 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 86
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 87 RSASLLKS 94
>gi|157131557|ref|XP_001655878.1| homeobox protein otx [Aedes aegypti]
gi|108881802|gb|EAT46027.1| AAEL002740-PA [Aedes aegypti]
Length = 413
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LES+F + T P +E+ ++++ + E+ V WF+NRRA+
Sbjct: 44 RERTTFTRAQLDVLESLFTK-TRYPDIFMREEVAMKIN----LPESRVQVWFKNRRAKC- 97
Query: 165 RKQL 168
R+QL
Sbjct: 98 RQQL 101
>gi|313241164|emb|CBY33457.1| unnamed protein product [Oikopleura dioica]
Length = 285
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R TP Q++ LES F + ++ VEL+ +SET + WFQNRR + K
Sbjct: 128 RPRTAFTPHQIKTLESEFQKNRYLSVGKR-----VELADSLGLSETQIKIWFQNRRTKWK 182
Query: 165 RKQLVS---SSANTLHNGGGGGAGAGAGGA 191
R+ L S + + G AG AG A
Sbjct: 183 REYLSDWELWSHQSYYAMHGVLAGQAAGSA 212
>gi|37788279|gb|AAP04271.1| homeodomain transcription factor ScOtx1 [Scyliorhinus canicula]
Length = 316
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R+R T T QL +LES+F + T P +E+ ++++ + E+ V WF+NRRA+ +
Sbjct: 40 RERTTFTRSQLDVLESLFAK-TRYPDIFMREEVALKIN----LPESRVQVWFKNRRAKCR 94
Query: 165 RKQ 167
++Q
Sbjct: 95 QQQ 97
>gi|443683851|gb|ELT87953.1| hypothetical protein CAPTEDRAFT_174285 [Capitella teleta]
Length = 368
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 84 RLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVE--L 141
RL +I L G H+ R R T QL LE F SK ++ + L
Sbjct: 88 RLADII---LEARYGSHRKQRRSRTAFTNQQLAALEKTF-------SKTHYPDVVMRERL 137
Query: 142 SQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNGGGGGAGAGAGGADSEV 195
+ + E + WF+NRRA+ ++KQ A + + A G G A+SE
Sbjct: 138 AMMTNLPEARIQVWFKNRRAKFRKKQ----RAQKMQDSKADVAENGVGNAESEA 187
>gi|355570187|gb|EHH25603.1| hypothetical protein EGK_21477, partial [Macaca mulatta]
Length = 120
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T QL LE +FD+ T P + ELSQ +SE V WFQNRRA+ +
Sbjct: 27 RSRTNFTLEQLNELERLFDE-THYPDAF----MREELSQRLGLSEARVQVWFQNRRAKCR 81
Query: 165 RKQLVSSSANTLHNG 179
+++ N +H G
Sbjct: 82 KQE------NQMHKG 90
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 141 RNRTTFTTFQLHELERAFEK-SHYPDVYSREELAMKIN----LPEVRVQVWFQNRRAKWR 195
Query: 165 RKQLVSSSANTLHN 178
R++ + + LH+
Sbjct: 196 RQEKIEAQTMKLHD 209
>gi|299749441|ref|XP_001838757.2| hypothetical protein CC1G_12380 [Coprinopsis cinerea okayama7#130]
gi|298408440|gb|EAU83072.2| hypothetical protein CC1G_12380 [Coprinopsis cinerea okayama7#130]
Length = 802
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 113 VQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
VQL+ LE +F P + KEI EL Q+SE WFQNRRA+ K
Sbjct: 72 VQLKRLEELFAMDPAPPPMVR-KEIAEEL----QMSERQTQIWFQNRRAKEK 118
>gi|291414337|ref|XP_002723417.1| PREDICTED: paired related homeobox 2, partial [Oryctolagus
cuniculus]
Length = 223
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 100 HKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNR 159
K R R T QLQ LE +F++ T P + EL++ +SE V WFQNR
Sbjct: 71 RKKQRRNRTTFNSSQLQALERVFER-THYPDA----FVREELARRVNLSEARVQVWFQNR 125
Query: 160 RA---RSKRKQLVSSSANTLHN 178
RA R++R L + SA+ L +
Sbjct: 126 RAKFRRNERAMLANRSASLLKS 147
>gi|410979364|ref|XP_003996055.1| PREDICTED: paired mesoderm homeobox protein 2 [Felis catus]
Length = 204
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 66 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 120
Query: 171 SSANTL 176
SA+ L
Sbjct: 121 RSASLL 126
>gi|307173149|gb|EFN64249.1| Homeobox protein OTX1 [Camponotus floridanus]
Length = 339
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 17/80 (21%)
Query: 87 NIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV--ELSQH 144
+ YC+P + R+R T T QL +LE +F SK K +I + E++
Sbjct: 83 SYYCNP--------RKQRRERTTFTRAQLDVLEGLF-------SKTKYPDIFMREEVAMK 127
Query: 145 GQISETNVYNWFQNRRARSK 164
+ E+ V WF+NRRA+ +
Sbjct: 128 INLPESRVQVWFKNRRAKCR 147
>gi|297850974|ref|XP_002893368.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
gi|297339210|gb|EFH69627.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 96 SGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNW 155
S G K+ ++R QL+ LE F+ G S +K+ EL++ + + W
Sbjct: 62 SDDGSKMGEKKRRLNME-QLKALEKNFELGNKLESDRKL-----ELARALGLQPRQIAIW 115
Query: 156 FQNRRARSKRKQL 168
FQNRRARSK KQL
Sbjct: 116 FQNRRARSKTKQL 128
>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
Length = 131
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP Q+Q LE++F + KQ++ ELS+ + V WFQNRR + K+ Q+
Sbjct: 9 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQI 61
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 145 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELAMKVN----LPEVRVQVWFQNRRAKWR 199
Query: 165 RKQLVSSSANTLHNG 179
R++ + +S LH+
Sbjct: 200 RQEKMDASTMKLHDS 214
>gi|195489357|ref|XP_002092703.1| GE11517 [Drosophila yakuba]
gi|194178804|gb|EDW92415.1| GE11517 [Drosophila yakuba]
Length = 219
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 33 VVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDP 92
V N + + +M D + + A+ ++ ++ + ++ + A +G+ D
Sbjct: 34 VANHMNHYNLMIDSGYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDF 93
Query: 93 LMTSGGGHKISA-------RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHG 145
+ S G +S R R T T QL LE IF + T P +EI +L
Sbjct: 94 HLKSFGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLE-THYPDIYTREEIASKL---- 148
Query: 146 QISETNVYNWFQNRRARSKRKQ 167
++E V WFQNRRA+ ++++
Sbjct: 149 HLTEARVQVWFQNRRAKFRKQE 170
>gi|384485407|gb|EIE77587.1| hypothetical protein RO3G_02291 [Rhizopus delemar RA 99-880]
Length = 157
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
TP QL++L SIF++ T TP+ Q + EL+ ++ V WFQNRRA+ RK+
Sbjct: 26 TPNQLEVLTSIFER-TKTPNYQLREHTAKELN----MTNREVQVWFQNRRAKLNRKR 77
>gi|350585343|ref|XP_003356036.2| PREDICTED: retina and anterior neural fold homeobox protein 2-like,
partial [Sus scrofa]
Length = 118
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 95 TSGGGHKISARQ-RWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
TS GH RQ R T VQL++LE F Q + +++ L+ ++ E V
Sbjct: 2 TSRSGHPKRQRQERTVYTKVQLEMLEKFFKQNEFPGYQDRLR-----LAASLRLEEHKVQ 56
Query: 154 NWFQNRRARSKRKQLVSSSANTLHNGGGGGA 184
WF+NRRA+ R L G G GA
Sbjct: 57 VWFKNRRAKRSR-------LERLAKGQGQGA 80
>gi|340905254|gb|EGS17622.1| putative sequence-specific DNA binding protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 641
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
RQR TP QL LES F++ TP+ Q + I E++ ++E +V WFQNRRA+ K
Sbjct: 97 RQRATPD--QLATLESEFNKNP-TPTAQVRERIAEEIN----MTERSVQIWFQNRRAKIK 149
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 91 DPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISET 150
D L G G + R R T T Q+QIL++ F Q P Q ++ I + ++++
Sbjct: 136 DGLDADGNGKNKTKRIRTTFTEEQIQILQANF-QVDSNPDGQDLERIALATGLSKRVTQV 194
Query: 151 NVYNWFQNRRARSKRKQLVSSSANTLHNG 179
WFQN RAR K K + A L NG
Sbjct: 195 ----WFQNSRARQK-KHVHVPRAQDLFNG 218
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T TP QL+ LE F++ T P +E L+Q +++E V WF NRRAR +
Sbjct: 196 RSRTTFTPEQLEELEKAFER-THYPDIYTREE----LAQRTKLTEARVQVWFSNRRARWR 250
Query: 165 RK 166
++
Sbjct: 251 KQ 252
>gi|6093750|sp|Q90963.1|PRRX2_CHICK RecName: Full=Paired mesoderm homeobox protein 2; Short=PRX-2
gi|558377|emb|CAA56136.1| Prx-2 (S8) [Gallus gallus]
Length = 165
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 27 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 81
Query: 171 SSANTLHNGGGGGA 184
SA+ L + A
Sbjct: 82 RSASLLKSYSQEAA 95
>gi|159232366|emb|CAM32356.1| putative wuschel homeobox protein [Brachypodium distachyon]
Length = 41
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVY 153
Q+ +LES++ QG TPS ++I+ IT +L + G I NV+
Sbjct: 1 QIAVLESLYKQGVRTPSAEQIQHITGKLREFGTIEGKNVF 40
>gi|384493559|gb|EIE84050.1| hypothetical protein RO3G_08755 [Rhizopus delemar RA 99-880]
Length = 342
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 92 PLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETN 151
PL T+ ++R TP QL ILE F T TP + K+ L++ ++ E +
Sbjct: 8 PLFTTNNSAD-DTKKRTRVTPGQLAILEETFSM-TATPDSKLRKQ----LAERLKMPERS 61
Query: 152 VYNWFQNRRARSKRKQ 167
+ WFQNRRA+ K Q
Sbjct: 62 IQIWFQNRRAKVKMLQ 77
>gi|328717407|ref|XP_003246199.1| PREDICTED: retinal homeobox protein Rx-B-like [Acyrthosiphon pisum]
Length = 230
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 80 AAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITV 139
A G L + D L G + R R T TP QLQ LES+F Q T P +E+ +
Sbjct: 2 AGGPYLSPLPGDLLSEYMFGRRRQRRNRTTFTPQQLQELESLF-QKTHYPDVFLREEVAL 60
Query: 140 ELSQHGQISETNVYNWFQNRRARSKR 165
++ +SE V WFQNRRA+ ++
Sbjct: 61 RIN----LSEARVQVWFQNRRAKWRK 82
>gi|440894374|gb|ELR46843.1| Paired mesoderm homeobox protein 2, partial [Bos grunniens mutus]
Length = 170
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 32 QLQALERVFER-THYP-DAFVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 86
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 87 RSASLLKS 94
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 105 RQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSK 164
R R T T QL LE F++ + P +E+ ++++ + E V WFQNRRA+ +
Sbjct: 40 RNRTTFTTYQLHELERAFEK-SHYPDVYSREELALKVN----LPEVRVQVWFQNRRAKWR 94
Query: 165 RKQLVSSSANTLHN 178
R++ + +S+ LH+
Sbjct: 95 RQEKMEASSTKLHD 108
>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
Length = 131
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 111 TPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQL 168
TP Q+Q LE++F + KQ++ ELS+ + V WFQNRR + K+ Q+
Sbjct: 9 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQI 61
>gi|395506283|ref|XP_003757464.1| PREDICTED: paired mesoderm homeobox protein 2 [Sarcophilus
harrisii]
Length = 243
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 114 QLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRA---RSKRKQLVS 170
QLQ LE +F++ T P ++E EL++ +SE V WFQNRRA R++R L +
Sbjct: 105 QLQALERVFER-THYPDA-FVRE---ELARRVNLSEARVQVWFQNRRAKFRRNERAMLAN 159
Query: 171 SSANTLHN 178
SA+ L +
Sbjct: 160 RSASLLKS 167
>gi|281341875|gb|EFB17459.1| hypothetical protein PANDA_012462 [Ailuropoda melanoleuca]
Length = 187
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 83 GRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELS 142
GRL C + HK + + R T QL LE F Q ++ E S
Sbjct: 41 GRLSPPAC-----TLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAER-----AEFS 90
Query: 143 QHGQISETNVYNWFQNRRARSKRKQ 167
++ET V WFQNRRA++KR Q
Sbjct: 91 SSLSLTETQVKIWFQNRRAKAKRLQ 115
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,983,274,075
Number of Sequences: 23463169
Number of extensions: 219804041
Number of successful extensions: 1378140
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 1675
Number of HSP's that attempted gapping in prelim test: 1373515
Number of HSP's gapped (non-prelim): 4878
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)