Query 022927
Match_columns 290
No_of_seqs 448 out of 2880
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:28:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.3E-26 4.3E-31 187.5 12.3 127 161-287 13-165 (169)
2 4gpm_A Engineered protein OR26 99.9 7.9E-27 2.7E-31 188.7 11.0 103 187-289 32-134 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.8E-25 2.7E-29 158.9 11.8 92 192-283 2-93 (93)
4 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.6E-25 2.3E-29 176.7 8.6 129 154-289 16-144 (169)
5 1bi7_B P16INK4A, MTS1, multipl 99.9 1.3E-24 4.5E-29 172.7 5.7 124 158-289 18-142 (156)
6 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-24 6.9E-29 167.7 6.6 121 154-281 16-136 (136)
7 1d9s_A Cyclin-dependent kinase 99.9 1.7E-24 5.7E-29 168.2 5.9 120 156-283 16-136 (136)
8 4b93_B Ankyrin repeat domain-c 99.9 1.3E-23 4.3E-28 182.3 11.7 126 157-289 91-216 (269)
9 3aaa_C Myotrophin, protein V-1 99.9 2.6E-23 9E-28 158.4 12.1 99 191-289 6-104 (123)
10 1awc_B Protein (GA binding pro 99.9 1.5E-23 5E-28 165.9 10.6 120 162-289 12-131 (153)
11 3twr_A Tankyrase-2; ankyrin re 99.9 4.7E-23 1.6E-27 164.8 13.1 122 161-289 17-139 (165)
12 3c5r_A BARD-1, BRCA1-associate 99.9 5.7E-23 2E-27 159.4 12.9 99 191-289 9-107 (137)
13 3f6q_A Integrin-linked protein 99.9 3.3E-23 1.1E-27 168.1 12.0 94 195-288 42-135 (179)
14 3v31_A Ankyrin repeat family A 99.9 2.7E-23 9.2E-28 166.5 10.9 123 160-289 11-133 (167)
15 3v30_A DNA-binding protein rfx 99.9 4E-23 1.4E-27 166.4 11.5 122 161-289 11-133 (172)
16 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-23 7.6E-28 177.3 10.3 122 159-288 12-133 (239)
17 2rfm_A Putative ankyrin repeat 99.9 3.3E-23 1.1E-27 169.9 10.9 123 160-289 43-165 (192)
18 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4E-23 1.4E-27 157.0 10.1 115 162-283 12-126 (126)
19 2l6b_A NR1C; ankyrin, consensu 99.9 1.2E-23 4.2E-28 158.3 6.9 99 191-289 8-106 (115)
20 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.4E-23 1.5E-27 164.2 10.4 114 163-283 48-162 (162)
21 2vge_A RELA-associated inhibit 99.9 9.9E-23 3.4E-27 172.5 12.8 123 159-288 28-153 (229)
22 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-22 3.7E-27 157.9 11.8 100 190-289 12-111 (136)
23 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.6E-23 1.9E-27 163.6 10.2 121 161-289 14-135 (162)
24 1d9s_A Cyclin-dependent kinase 99.9 6.2E-23 2.1E-27 159.2 9.7 106 176-289 3-109 (136)
25 2vge_A RELA-associated inhibit 99.9 2.6E-23 8.9E-28 176.1 7.9 117 168-288 1-117 (229)
26 3f6q_A Integrin-linked protein 99.9 9.3E-23 3.2E-27 165.5 10.7 124 158-288 45-168 (179)
27 1oy3_D Transcription factor in 99.9 3.6E-22 1.2E-26 172.5 13.0 99 191-289 157-256 (282)
28 3v30_A DNA-binding protein rfx 99.9 6.5E-23 2.2E-27 165.1 7.6 123 159-288 43-165 (172)
29 3twr_A Tankyrase-2; ankyrin re 99.9 3.2E-22 1.1E-26 159.9 11.0 117 158-282 48-164 (165)
30 4b93_B Ankyrin repeat domain-c 99.9 3.5E-22 1.2E-26 173.2 12.0 118 165-289 66-183 (269)
31 2dzn_A Probable 26S proteasome 99.9 5.8E-22 2E-26 166.2 11.9 123 160-289 80-206 (228)
32 3aji_A 26S proteasome non-ATPa 99.9 6E-22 2.1E-26 166.6 12.0 123 160-289 81-203 (231)
33 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-22 4.3E-27 172.6 7.8 124 158-288 43-169 (239)
34 1ikn_D Protein (I-kappa-B-alph 99.9 8.5E-22 2.9E-26 166.6 12.8 126 159-284 52-210 (236)
35 1yyh_A HN1;, notch 1, ankyrin 99.9 3.5E-22 1.2E-26 171.0 10.3 122 161-289 99-221 (253)
36 3ehr_A Osteoclast-stimulating 99.9 6.8E-22 2.3E-26 165.8 11.8 99 191-289 72-171 (222)
37 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.3E-22 2.2E-26 159.1 11.0 116 159-281 54-169 (169)
38 3lvq_E ARF-GAP with SH3 domain 99.9 2.8E-22 9.7E-27 188.3 9.9 129 158-287 138-269 (497)
39 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.9E-21 6.6E-26 147.6 12.1 98 192-289 2-99 (126)
40 2rfa_A Transient receptor pote 99.9 9.8E-22 3.3E-26 165.5 11.3 119 163-288 14-151 (232)
41 2f8y_A Notch homolog 1, transl 99.9 1.4E-21 4.9E-26 163.4 11.8 121 161-288 67-188 (223)
42 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-21 3.4E-26 155.4 10.1 112 160-279 43-154 (156)
43 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-21 4.4E-26 154.8 10.6 119 162-289 12-131 (156)
44 3deo_A Signal recognition part 99.9 1.3E-21 4.6E-26 159.4 10.8 99 190-289 42-141 (183)
45 1s70_B 130 kDa myosin-binding 99.9 1.5E-21 5.3E-26 170.3 11.8 124 159-289 80-263 (299)
46 3b7b_A Euchromatic histone-lys 99.9 2.7E-21 9.2E-26 163.2 12.2 124 159-289 84-208 (237)
47 1dcq_A PYK2-associated protein 99.9 1.4E-21 4.7E-26 170.3 10.5 123 161-284 139-264 (278)
48 1bi7_B P16INK4A, MTS1, multipl 99.9 6.5E-22 2.2E-26 157.0 7.7 98 191-289 11-109 (156)
49 1awc_B Protein (GA binding pro 99.9 2.2E-21 7.5E-26 153.3 10.7 112 159-277 41-152 (153)
50 3aji_A 26S proteasome non-ATPa 99.9 2.6E-21 8.9E-26 162.7 11.8 123 160-289 48-170 (231)
51 3t8k_A Uncharacterized protein 99.9 1.2E-21 4.2E-26 160.6 9.3 99 191-289 37-152 (186)
52 1wdy_A 2-5A-dependent ribonucl 99.9 2.7E-21 9.3E-26 166.7 11.9 124 160-290 156-285 (285)
53 3ehr_A Osteoclast-stimulating 99.9 4E-22 1.4E-26 167.2 6.4 121 161-288 82-203 (222)
54 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-21 7.5E-26 163.9 10.9 123 160-289 87-214 (241)
55 1yyh_A HN1;, notch 1, ankyrin 99.9 1.6E-21 5.4E-26 166.9 10.0 126 157-289 62-188 (253)
56 3v31_A Ankyrin repeat family A 99.9 1.1E-21 3.6E-26 157.2 8.1 120 159-285 43-162 (167)
57 3hra_A Ankyrin repeat family p 99.8 3.1E-21 1.1E-25 158.7 11.0 123 160-289 47-176 (201)
58 1n11_A Ankyrin; clathrin, BAND 99.8 2.5E-21 8.7E-26 178.1 11.5 123 160-289 253-375 (437)
59 3c5r_A BARD-1, BRCA1-associate 99.8 6.7E-22 2.3E-26 153.4 6.3 117 160-283 18-134 (137)
60 3jxi_A Vanilloid receptor-rela 99.8 4.7E-22 1.6E-26 170.4 5.9 125 161-285 58-212 (260)
61 1oy3_D Transcription factor in 99.8 2E-21 7E-26 167.7 9.8 124 159-289 52-223 (282)
62 2rfm_A Putative ankyrin repeat 99.8 1.7E-21 5.9E-26 159.6 8.8 116 159-281 75-190 (192)
63 2f8y_A Notch homolog 1, transl 99.8 1.1E-20 3.9E-25 157.9 14.0 127 156-289 29-156 (223)
64 1x4u_A Zinc finger, FYVE domai 99.8 4.5E-22 1.5E-26 141.0 4.5 61 4-64 13-79 (84)
65 3ui2_A Signal recognition part 99.8 3.3E-21 1.1E-25 164.5 10.6 99 190-289 43-142 (244)
66 2xai_A ASB-9, ankyrin repeat a 99.8 5.5E-21 1.9E-25 164.4 11.8 115 163-285 47-161 (261)
67 2xai_A ASB-9, ankyrin repeat a 99.8 3.9E-21 1.3E-25 165.3 10.8 121 160-289 77-197 (261)
68 2etb_A Transient receptor pote 99.8 1.1E-21 3.7E-26 168.0 7.1 122 163-284 57-207 (256)
69 3jue_A Arfgap with coiled-coil 99.8 1.7E-21 5.8E-26 176.0 8.7 120 159-283 206-326 (368)
70 2pnn_A Transient receptor pote 99.8 1E-21 3.4E-26 169.8 6.7 132 156-287 105-263 (273)
71 1s70_B 130 kDa myosin-binding 99.8 4.8E-21 1.6E-25 167.2 10.9 124 159-289 47-230 (299)
72 2rfa_A Transient receptor pote 99.8 5.7E-21 1.9E-25 160.8 10.7 126 158-285 43-185 (232)
73 3utm_A Tankyrase-1; tankyrase, 99.8 5.8E-21 2E-25 169.7 11.3 131 159-289 131-311 (351)
74 1wfk_A Zinc finger, FYVE domai 99.8 1.2E-21 4.1E-26 139.5 5.4 61 3-64 7-67 (88)
75 3t8k_A Uncharacterized protein 99.8 3.4E-22 1.2E-26 163.9 3.0 117 166-289 56-185 (186)
76 2b0o_E UPLC1; arfgap, structur 99.8 1.9E-21 6.4E-26 171.3 7.9 126 159-285 158-286 (301)
77 2pnn_A Transient receptor pote 99.8 1.1E-21 3.7E-26 169.6 6.2 125 162-286 67-221 (273)
78 3aaa_C Myotrophin, protein V-1 99.8 2.7E-21 9.2E-26 147.2 7.7 107 160-273 15-121 (123)
79 2zgd_A 3 repeat synthetic anky 99.8 1E-20 3.5E-25 141.5 10.6 87 191-277 23-109 (110)
80 3utm_A Tankyrase-1; tankyrase, 99.8 1.4E-20 4.8E-25 167.2 13.2 122 160-288 32-154 (351)
81 3hra_A Ankyrin repeat family p 99.8 1.4E-20 4.8E-25 154.8 12.0 123 160-289 13-138 (201)
82 4g8k_A 2-5A-dependent ribonucl 99.8 5.1E-21 1.7E-25 170.3 10.1 111 166-288 220-331 (337)
83 4hbd_A KN motif and ankyrin re 99.8 3.3E-21 1.1E-25 167.5 8.5 123 159-281 118-273 (276)
84 1ikn_D Protein (I-kappa-B-alph 99.8 1.4E-20 4.7E-25 159.1 11.8 130 159-288 15-181 (236)
85 1sw6_A Regulatory protein SWI6 99.8 9.7E-21 3.3E-25 168.4 11.3 117 166-289 111-314 (327)
86 2dzn_A Probable 26S proteasome 99.8 1.2E-20 4E-25 158.2 11.2 127 159-289 43-172 (228)
87 3d9h_A CDNA FLJ77766, highly s 99.8 1.2E-20 4E-25 164.6 11.6 121 160-289 133-253 (285)
88 3b7b_A Euchromatic histone-lys 99.8 1.7E-20 5.6E-25 158.3 12.1 124 159-289 51-175 (237)
89 3jxi_A Vanilloid receptor-rela 99.8 1.6E-21 5.3E-26 167.2 5.4 127 158-284 99-251 (260)
90 1z2q_A LM5-1; membrane protein 99.8 5.8E-22 2E-26 140.4 2.2 61 4-64 20-80 (84)
91 3ljn_A Hypothetical protein; a 99.8 1.3E-21 4.4E-26 176.0 5.1 119 160-285 146-271 (364)
92 2etb_A Transient receptor pote 99.8 1.8E-21 6E-26 166.6 5.5 129 156-284 94-247 (256)
93 1vfy_A Phosphatidylinositol-3- 99.8 3.8E-22 1.3E-26 137.5 0.7 58 5-62 11-68 (73)
94 1k1a_A B-cell lymphoma 3-encod 99.8 2.5E-20 8.6E-25 157.3 11.6 124 159-289 53-181 (241)
95 3d9h_A CDNA FLJ77766, highly s 99.8 1.9E-20 6.4E-25 163.3 11.2 121 160-288 67-187 (285)
96 1wdy_A 2-5A-dependent ribonucl 99.8 2.7E-20 9.2E-25 160.4 12.0 121 161-287 14-134 (285)
97 3ljn_A Hypothetical protein; a 99.8 4.2E-21 1.4E-25 172.6 7.1 132 158-289 90-242 (364)
98 4hbd_A KN motif and ankyrin re 99.8 1.3E-20 4.6E-25 163.6 9.4 99 191-289 144-248 (276)
99 4g8k_A 2-5A-dependent ribonucl 99.8 3.2E-20 1.1E-24 165.2 10.3 123 160-289 176-304 (337)
100 3kea_A K1L; tropism, ANK repea 99.8 8.8E-21 3E-25 165.5 6.5 116 160-284 39-155 (285)
101 3deo_A Signal recognition part 99.8 4.2E-20 1.4E-24 150.5 9.3 114 159-280 51-181 (183)
102 3ui2_A Signal recognition part 99.8 3.2E-20 1.1E-24 158.4 8.7 118 158-283 51-185 (244)
103 1n11_A Ankyrin; clathrin, BAND 99.8 5.3E-20 1.8E-24 169.3 10.7 123 160-289 220-342 (437)
104 3kea_A K1L; tropism, ANK repea 99.8 1.2E-20 4.1E-25 164.6 6.0 126 156-288 66-225 (285)
105 2yw8_A RUN and FYVE domain-con 99.8 4.5E-21 1.6E-25 135.1 2.6 58 4-63 18-75 (82)
106 3eu9_A Huntingtin-interacting 99.8 1.8E-19 6.1E-24 151.6 11.9 124 159-289 16-140 (240)
107 2fo1_E LIN-12 protein; beta-ba 99.8 5.9E-20 2E-24 166.2 8.7 99 191-289 234-344 (373)
108 3t7l_A Zinc finger FYVE domain 99.8 7.6E-21 2.6E-25 136.2 1.8 61 4-66 19-79 (90)
109 3jue_A Arfgap with coiled-coil 99.8 2.3E-19 7.9E-24 162.0 11.2 98 192-289 199-299 (368)
110 3eu9_A Huntingtin-interacting 99.8 1.6E-19 5.5E-24 151.8 9.6 123 160-289 84-208 (240)
111 2fo1_E LIN-12 protein; beta-ba 99.8 4.8E-19 1.6E-23 160.2 11.2 123 157-286 130-266 (373)
112 1joc_A EEA1, early endosomal a 99.8 3.8E-20 1.3E-24 140.7 2.7 57 4-62 68-124 (125)
113 3lvq_E ARF-GAP with SH3 domain 99.8 8.5E-19 2.9E-23 164.6 12.0 96 194-289 134-238 (497)
114 2b0o_E UPLC1; arfgap, structur 99.8 9.7E-19 3.3E-23 153.9 11.2 96 194-289 153-257 (301)
115 1dcq_A PYK2-associated protein 99.8 2.2E-18 7.4E-23 150.0 12.2 96 194-289 132-236 (278)
116 3zyq_A Hepatocyte growth facto 99.7 1.5E-19 5E-24 152.0 1.6 61 5-65 164-224 (226)
117 1dvp_A HRS, hepatocyte growth 99.7 2.2E-19 7.7E-24 150.6 1.6 59 5-63 161-219 (220)
118 1sw6_A Regulatory protein SWI6 99.7 4.9E-18 1.7E-22 150.9 3.6 127 163-289 30-199 (327)
119 1y02_A CARP2, FYVE-ring finger 99.7 2.9E-18 9.8E-23 128.1 1.1 52 4-63 18-69 (120)
120 2aja_A Ankyrin repeat family p 99.7 3.9E-18 1.3E-22 154.5 -1.4 122 156-282 96-223 (376)
121 2l6b_A NR1C; ankyrin, consensu 99.7 3E-17 1E-21 123.0 3.3 96 160-262 17-112 (115)
122 1n0q_A 3ANK, 3 ankyrin repeats 99.6 2.5E-16 8.5E-21 113.6 7.6 82 162-250 12-93 (93)
123 2zgd_A 3 repeat synthetic anky 99.6 3.1E-15 1.1E-19 111.4 7.1 72 218-289 17-88 (110)
124 2aja_A Ankyrin repeat family p 99.6 5E-16 1.7E-20 140.6 1.8 93 193-286 93-191 (376)
125 3mpx_A FYVE, rhogef and PH dom 99.5 6.1E-16 2.1E-20 142.7 0.0 58 5-63 375-432 (434)
126 2zet_C Melanophilin; complex, 95.2 0.0063 2.2E-07 47.1 1.6 50 5-61 68-118 (153)
127 1zbd_B Rabphilin-3A; G protein 95.2 0.007 2.4E-07 45.8 1.7 53 5-61 55-108 (134)
128 1wfh_A Zinc finger (AN1-like) 94.4 0.023 7.8E-07 36.7 2.3 27 6-35 16-42 (64)
129 3ky9_A Proto-oncogene VAV; cal 94.0 0.016 5.5E-07 55.0 1.4 34 5-38 529-563 (587)
130 1wfp_A Zinc finger (AN1-like) 93.9 0.031 1.1E-06 37.1 2.3 27 6-35 26-52 (74)
131 1wff_A Riken cDNA 2810002D23 p 93.7 0.038 1.3E-06 37.9 2.5 27 7-35 27-53 (85)
132 1wfl_A Zinc finger protein 216 93.6 0.034 1.2E-06 37.0 2.1 26 7-35 27-52 (74)
133 1z60_A TFIIH basal transcripti 93.3 0.0096 3.3E-07 38.0 -0.9 28 7-35 17-44 (59)
134 1wg2_A Zinc finger (AN1-like) 92.1 0.083 2.8E-06 34.1 2.3 27 6-35 16-42 (64)
135 2jrp_A Putative cytoplasmic pr 91.3 0.16 5.3E-06 34.5 3.0 57 6-64 3-64 (81)
136 2csz_A Synaptotagmin-like prot 89.4 0.2 6.9E-06 33.5 2.3 48 6-61 26-74 (76)
137 1x4w_A Hypothetical protein FL 85.0 0.21 7.2E-06 32.5 0.4 28 7-35 17-45 (67)
138 2ecm_A Ring finger and CHY zin 81.8 0.29 1E-05 30.1 0.1 49 5-61 5-53 (55)
139 2fc7_A ZZZ3 protein; structure 79.1 0.76 2.6E-05 31.3 1.5 37 1-38 17-57 (82)
140 1iym_A EL5; ring-H2 finger, ub 79.0 0.6 2.1E-05 28.6 0.9 49 5-61 5-53 (55)
141 2egp_A Tripartite motif-contai 76.8 0.87 3E-05 30.2 1.2 53 5-62 12-64 (79)
142 2ect_A Ring finger protein 126 76.4 2.7 9.4E-05 27.6 3.7 51 5-64 15-65 (78)
143 2jne_A Hypothetical protein YF 76.0 1.1 3.7E-05 31.3 1.5 56 6-63 33-93 (101)
144 2e72_A POGO transposable eleme 74.6 0.4 1.4E-05 28.8 -0.8 26 6-31 13-40 (49)
145 2ysl_A Tripartite motif-contai 72.4 0.56 1.9E-05 30.7 -0.7 49 5-62 20-68 (73)
146 2ecv_A Tripartite motif-contai 71.0 1 3.5E-05 30.1 0.4 52 5-62 19-70 (85)
147 2ct2_A Tripartite motif protei 70.7 1.4 4.8E-05 29.8 1.1 54 4-62 14-67 (88)
148 2djb_A Polycomb group ring fin 68.9 0.92 3.2E-05 29.6 -0.2 48 5-63 15-62 (72)
149 2gmg_A Hypothetical protein PF 68.6 2 6.8E-05 30.6 1.5 15 17-31 63-77 (105)
150 2ep4_A Ring finger protein 24; 68.4 0.92 3.1E-05 29.7 -0.3 49 5-62 15-63 (74)
151 1wd2_A Ariadne-1 protein homol 67.1 5.8 0.0002 25.1 3.4 37 4-40 5-45 (60)
152 1x4v_A Hypothetical protein LO 66.8 3.2 0.00011 26.6 2.0 21 11-34 20-40 (63)
153 1chc_A Equine herpes virus-1 r 66.4 3.2 0.00011 26.4 2.1 51 1-62 1-51 (68)
154 1bor_A Transcription factor PM 66.3 6.4 0.00022 24.1 3.5 43 5-62 6-48 (56)
155 2kn9_A Rubredoxin; metalloprot 65.6 11 0.00039 25.3 4.7 34 1-34 1-40 (81)
156 1twf_L ABC10-alpha, DNA-direct 65.5 2.4 8.2E-05 27.8 1.3 22 8-29 31-53 (70)
157 2ecn_A Ring finger protein 141 64.9 1.2 4.1E-05 28.8 -0.3 46 5-63 15-60 (70)
158 2d8t_A Dactylidin, ring finger 64.7 0.8 2.7E-05 29.9 -1.2 46 5-62 15-60 (71)
159 3l11_A E3 ubiquitin-protein li 61.8 2 6.8E-05 30.9 0.4 46 6-62 16-61 (115)
160 1wys_A Riken cDNA 2310008M20 p 61.0 5.8 0.0002 26.4 2.5 22 11-35 22-43 (75)
161 3lrq_A E3 ubiquitin-protein li 60.9 0.98 3.3E-05 31.8 -1.4 47 6-62 23-69 (100)
162 2ecy_A TNF receptor-associated 59.9 0.79 2.7E-05 29.3 -1.9 46 6-62 16-61 (66)
163 1vq8_1 50S ribosomal protein L 57.8 4.3 0.00015 25.3 1.4 14 24-37 20-40 (57)
164 4gzn_C ZFP-57, zinc finger pro 57.2 3.3 0.00011 26.0 0.9 11 21-31 32-42 (60)
165 3fl2_A E3 ubiquitin-protein li 56.9 1.2 4.2E-05 32.5 -1.5 46 6-62 53-98 (124)
166 2ysj_A Tripartite motif-contai 56.5 3.1 0.0001 26.1 0.6 33 5-41 20-52 (63)
167 2ct7_A Ring finger protein 31; 55.4 4.6 0.00016 27.5 1.4 32 8-39 28-61 (86)
168 2ecw_A Tripartite motif-contai 53.9 2.3 7.9E-05 28.3 -0.4 52 5-62 19-70 (85)
169 2dip_A Zinc finger SWIM domain 52.1 4.6 0.00016 28.4 1.0 33 2-35 28-61 (98)
170 1wfe_A Riken cDNA 2310008M20 p 50.9 4 0.00014 27.9 0.5 22 11-35 33-54 (86)
171 3j20_Y 30S ribosomal protein S 50.8 5.2 0.00018 24.3 0.9 10 21-30 37-46 (50)
172 1jm7_B BARD1, BRCA1-associated 50.6 12 0.0004 26.8 3.0 43 6-61 23-65 (117)
173 4ayb_P DNA-directed RNA polyme 50.4 9.7 0.00033 22.7 2.0 23 7-29 5-31 (48)
174 6rxn_A Rubredoxin; electron tr 50.0 5.5 0.00019 23.7 0.9 13 20-32 3-15 (46)
175 3uk3_C Zinc finger protein 217 49.4 9.1 0.00031 22.7 2.0 10 7-16 6-15 (57)
176 2kvh_A Zinc finger and BTB dom 49.0 6.8 0.00023 18.9 1.1 13 20-32 2-14 (27)
177 2gqj_A Zinc finger protein KIA 48.9 3.9 0.00013 28.1 0.2 12 20-31 23-34 (98)
178 2l0b_A E3 ubiquitin-protein li 48.4 1.4 4.9E-05 30.3 -2.2 47 6-61 41-87 (91)
179 1jer_A Cucumber stellacyanin; 48.0 5.6 0.00019 29.9 0.9 18 109-126 94-111 (138)
180 1tot_A CREB-binding protein; z 47.7 2.6 8.8E-05 25.9 -0.8 28 5-35 6-34 (52)
181 1vd4_A Transcription initiatio 47.6 4.3 0.00015 25.2 0.2 14 19-32 12-25 (62)
182 1dx8_A Rubredoxin; electron tr 47.2 16 0.00056 23.8 3.0 41 19-59 5-48 (70)
183 2lce_A B-cell lymphoma 6 prote 46.9 11 0.00039 23.8 2.3 9 8-16 20-28 (74)
184 1yk4_A Rubredoxin, RD; electro 46.6 6.3 0.00021 24.1 0.8 15 20-34 1-15 (52)
185 2kiz_A E3 ubiquitin-protein li 46.5 3 0.0001 26.7 -0.7 48 6-62 15-62 (69)
186 3zrh_A Ubiquitin thioesterase 46.3 50 0.0017 29.4 6.7 48 199-246 29-90 (454)
187 1ard_A Yeast transcription fac 46.0 6.9 0.00024 19.1 0.9 11 21-31 2-12 (29)
188 2kvf_A Zinc finger and BTB dom 44.9 8.1 0.00028 18.7 1.0 13 20-32 2-14 (28)
189 2m0d_A Zinc finger and BTB dom 43.7 8.9 0.0003 18.7 1.1 13 20-32 2-14 (30)
190 1pft_A TFIIB, PFTFIIBN; N-term 43.3 11 0.00039 22.5 1.7 8 6-13 6-13 (50)
191 3j21_g 50S ribosomal protein L 42.9 9.9 0.00034 23.2 1.3 9 21-29 14-22 (51)
192 2k4x_A 30S ribosomal protein S 42.8 15 0.0005 22.7 2.1 9 21-29 36-44 (55)
193 2kvg_A Zinc finger and BTB dom 42.6 8.4 0.00029 18.7 0.9 13 20-32 2-14 (27)
194 2jmo_A Parkin; IBR, E3 ligase, 42.4 9.8 0.00033 25.4 1.4 28 11-38 33-67 (80)
195 1bbo_A Human enhancer-binding 42.2 16 0.00055 21.5 2.3 10 7-16 3-12 (57)
196 1rik_A E6APC1 peptide; E6-bind 42.0 9.6 0.00033 18.5 1.1 12 21-32 2-13 (29)
197 2lv2_A Insulinoma-associated p 41.9 8.3 0.00028 26.0 1.0 16 18-33 25-40 (85)
198 1jm7_A BRCA1, breast cancer ty 41.9 7.9 0.00027 27.2 0.9 48 6-62 22-69 (112)
199 2m0e_A Zinc finger and BTB dom 41.8 9.6 0.00033 18.4 1.0 13 21-33 2-14 (29)
200 1e8j_A Rubredoxin; iron-sulfur 41.5 7.5 0.00026 23.8 0.6 14 20-33 2-15 (52)
201 2lvu_A Zinc finger and BTB dom 47.6 5.6 0.00019 19.1 0.0 13 21-33 2-14 (26)
202 2ctu_A Zinc finger protein 483 41.2 10 0.00035 23.7 1.3 14 20-33 17-30 (73)
203 2d9h_A Zinc finger protein 692 41.2 9.8 0.00033 24.4 1.2 9 8-16 10-18 (78)
204 2m0f_A Zinc finger and BTB dom 41.0 10 0.00034 18.3 1.0 12 21-32 2-13 (29)
205 1s24_A Rubredoxin 2; electron 40.8 19 0.00067 24.5 2.7 16 19-34 33-48 (87)
206 2ecj_A Tripartite motif-contai 40.8 7.7 0.00026 23.5 0.6 32 5-40 15-46 (58)
207 2v3b_B Rubredoxin 2, rubredoxi 40.6 8.6 0.00029 23.8 0.8 15 20-34 2-16 (55)
208 1x4j_A Ring finger protein 38; 39.9 8 0.00027 25.1 0.6 48 5-61 23-70 (75)
209 4rxn_A Rubredoxin; electron tr 39.2 10 0.00034 23.4 0.9 15 20-34 2-16 (54)
210 2ea6_A Ring finger protein 4; 38.9 4.6 0.00016 25.5 -0.7 49 5-61 15-66 (69)
211 2els_A Zinc finger protein 406 38.8 12 0.0004 19.6 1.1 15 19-33 7-21 (36)
212 2e5r_A Dystrobrevin alpha; ZZ 38.5 11 0.00036 24.1 1.0 31 4-35 10-41 (63)
213 2cot_A Zinc finger protein 435 38.5 19 0.00065 22.9 2.4 12 20-31 17-28 (77)
214 3vk6_A E3 ubiquitin-protein li 37.8 2.7 9.2E-05 29.6 -2.1 45 8-62 4-48 (101)
215 2adr_A ADR1; transcription reg 37.3 15 0.00051 22.0 1.6 10 7-16 4-13 (60)
216 2csy_A Zinc finger protein 183 37.2 8.7 0.0003 25.3 0.5 45 6-62 16-60 (81)
217 1wil_A KIAA1045 protein; ring 37.0 19 0.00066 24.3 2.1 32 5-38 15-46 (89)
218 1klr_A Zinc finger Y-chromosom 37.0 11 0.00037 18.3 0.8 10 22-31 3-12 (30)
219 3h0g_L DNA-directed RNA polyme 36.7 20 0.00067 22.9 2.0 21 8-28 24-45 (63)
220 4ayc_A E3 ubiquitin-protein li 36.2 4.8 0.00016 29.9 -1.1 45 6-62 54-98 (138)
221 4ap4_A E3 ubiquitin ligase RNF 36.1 3.3 0.00011 30.1 -2.0 54 1-62 3-59 (133)
222 1z6u_A NP95-like ring finger p 36.0 4.2 0.00014 30.9 -1.5 46 6-62 79-124 (150)
223 2elr_A Zinc finger protein 406 35.8 13 0.00044 19.3 1.0 14 19-32 7-20 (36)
224 1x5w_A Zinc finger protein 64, 35.5 16 0.00056 22.7 1.6 12 20-31 8-19 (70)
225 2elx_A Zinc finger protein 406 34.9 15 0.0005 18.8 1.1 14 19-32 5-18 (35)
226 1paa_A Yeast transcription fac 34.3 13 0.00046 18.1 0.9 10 22-31 3-12 (30)
227 3ng2_A RNF4, snurf, ring finge 34.2 5.9 0.0002 25.3 -0.8 50 5-62 10-62 (71)
228 2ctd_A Zinc finger protein 512 34.2 17 0.00057 24.8 1.6 8 8-15 37-44 (96)
229 1x6e_A Zinc finger protein 24; 33.7 13 0.00046 23.3 0.9 12 20-31 13-24 (72)
230 2jsp_A Transcriptional regulat 32.9 7.9 0.00027 26.5 -0.3 20 2-22 18-37 (87)
231 2elo_A Zinc finger protein 406 32.8 13 0.00045 19.5 0.7 14 19-32 7-20 (37)
232 2y1n_A E3 ubiquitin-protein li 32.5 6.2 0.00021 35.1 -1.2 47 6-63 333-379 (389)
233 2lvt_A Zinc finger and BTB dom 38.4 9.6 0.00033 18.6 0.0 13 21-33 2-14 (29)
234 2elv_A Zinc finger protein 406 32.1 17 0.0006 18.8 1.1 14 19-32 7-20 (36)
235 2kdx_A HYPA, hydrogenase/ureas 31.5 18 0.0006 26.2 1.4 13 19-31 71-83 (119)
236 1srk_A Zinc finger protein ZFP 31.4 18 0.00063 18.5 1.1 15 19-33 5-19 (35)
237 2elt_A Zinc finger protein 406 31.4 18 0.00063 18.6 1.1 14 19-32 7-20 (36)
238 2ckl_B Ubiquitin ligase protei 30.9 5.6 0.00019 30.5 -1.6 45 7-61 56-100 (165)
239 2a20_A Regulating synaptic mem 30.7 25 0.00084 22.0 1.7 48 8-60 12-60 (62)
240 2ckl_A Polycomb group ring fin 30.5 7 0.00024 27.5 -1.0 47 5-62 15-61 (108)
241 2kwq_A Protein MCM10 homolog; 30.5 15 0.00051 25.4 0.7 9 50-58 64-72 (92)
242 2fiy_A Protein FDHE homolog; F 30.5 14 0.00046 31.8 0.7 44 20-64 207-266 (309)
243 1d4u_A Nucleotide excision rep 29.9 31 0.001 24.7 2.3 13 48-60 23-35 (111)
244 2elp_A Zinc finger protein 406 29.9 20 0.00069 18.7 1.1 15 19-33 7-21 (37)
245 2elq_A Zinc finger protein 406 29.8 20 0.00069 18.5 1.1 14 19-32 7-20 (36)
246 2elu_A Zinc finger protein 406 29.6 15 0.00052 19.8 0.5 10 20-29 8-17 (37)
247 2vut_I AREA, nitrogen regulato 29.3 16 0.00053 21.4 0.6 15 7-21 3-17 (43)
248 2xeu_A Ring finger protein 4; 29.2 8.7 0.0003 23.7 -0.6 49 6-62 4-55 (64)
249 2dmd_A Zinc finger protein 64, 29.0 23 0.00079 23.4 1.6 10 7-16 10-19 (96)
250 2kfq_A FP1; protein, de novo p 28.9 13 0.00046 18.9 0.3 11 22-32 3-13 (32)
251 1g25_A CDK-activating kinase a 28.7 8.4 0.00029 24.1 -0.7 50 6-62 4-54 (65)
252 2yur_A Retinoblastoma-binding 28.3 31 0.001 22.1 2.0 48 5-61 15-62 (74)
253 1gnf_A Transcription factor GA 28.2 20 0.0007 21.2 1.0 16 6-21 5-20 (46)
254 1v87_A Deltex protein 2; ring- 27.9 19 0.00064 25.4 0.9 54 6-62 26-93 (114)
255 1rim_A E6APC2 peptide; E6-bind 27.6 19 0.00066 18.4 0.8 11 21-31 2-12 (33)
256 3iuf_A Zinc finger protein UBI 27.5 22 0.00076 20.3 1.1 15 19-33 5-19 (48)
257 2d8v_A Zinc finger FYVE domain 26.9 25 0.00085 22.6 1.3 24 8-36 11-35 (67)
258 1gp8_A Protein (scaffolding pr 26.8 46 0.0016 18.8 2.2 18 195-212 16-33 (40)
259 3jyw_9 60S ribosomal protein L 26.7 34 0.0012 22.4 1.9 9 23-31 46-54 (72)
260 1znf_A 31ST zinc finger from X 26.6 20 0.00069 16.8 0.7 10 22-31 2-11 (27)
261 1p7a_A BF3, BKLF, kruppel-like 26.6 23 0.00078 18.4 1.0 14 19-32 9-22 (37)
262 2gmg_A Hypothetical protein PF 26.5 34 0.0012 24.2 2.0 31 7-45 69-100 (105)
263 2ayj_A 50S ribosomal protein L 26.1 22 0.00075 22.0 0.9 19 8-28 22-40 (56)
264 2lvr_A Zinc finger and BTB dom 31.8 14 0.00049 17.9 0.0 13 21-33 3-15 (30)
265 1wjp_A Zinc finger protein 295 25.8 30 0.001 23.6 1.7 26 7-32 18-53 (107)
266 2elm_A Zinc finger protein 406 25.1 26 0.00088 18.4 1.0 15 19-33 7-21 (37)
267 2dmi_A Teashirt homolog 3; zin 25.1 38 0.0013 23.3 2.2 10 52-61 81-90 (115)
268 3c5k_A HD6, histone deacetylas 24.9 34 0.0012 24.3 1.9 25 7-35 26-50 (109)
269 1j0t_A MIH, MOLT-inhibiting ho 24.9 11 0.00038 25.2 -0.7 14 49-62 20-33 (78)
270 2epv_A Zinc finger protein 268 24.7 28 0.00094 19.2 1.1 15 19-33 10-24 (44)
271 1k81_A EIF-2-beta, probable tr 24.7 19 0.00064 20.1 0.3 23 7-29 2-29 (36)
272 3cc2_Z 50S ribosomal protein L 24.5 20 0.00068 25.8 0.5 12 22-33 79-90 (116)
273 1njq_A Superman protein; zinc- 24.3 29 0.00098 18.4 1.1 15 19-33 4-18 (39)
274 2vqe_N 30S ribosomal protein S 24.0 85 0.0029 19.7 3.4 35 18-66 18-52 (61)
275 3j21_i 50S ribosomal protein L 24.0 31 0.0011 23.3 1.4 10 23-32 55-64 (83)
276 4ic3_A E3 ubiquitin-protein li 23.7 9.4 0.00032 24.9 -1.3 41 6-62 25-66 (74)
277 2ab3_A ZNF29; zinc finger prot 23.3 27 0.00091 16.6 0.8 12 21-32 2-15 (29)
278 2emi_A Zinc finger protein 484 23.2 31 0.001 19.1 1.1 15 19-33 10-24 (46)
279 2epc_A Zinc finger protein 32; 22.5 33 0.0011 18.4 1.1 15 19-33 9-23 (42)
280 3hct_A TNF receptor-associated 22.5 21 0.00071 25.5 0.3 45 6-61 19-63 (118)
281 2ytp_A Zinc finger protein 484 22.5 32 0.0011 19.0 1.1 15 19-33 10-24 (46)
282 2eow_A Zinc finger protein 347 22.3 32 0.0011 18.9 1.1 15 19-33 10-24 (46)
283 2ept_A Zinc finger protein 32; 22.1 33 0.0011 18.3 1.1 14 19-32 8-21 (41)
284 2yrm_A B-cell lymphoma 6 prote 22.0 31 0.0011 18.8 1.0 14 19-32 8-21 (43)
285 1fv5_A First zinc finger of U- 21.9 28 0.00095 19.1 0.7 15 19-33 6-20 (36)
286 1gh9_A 8.3 kDa protein (gene M 21.8 29 0.00098 22.7 0.8 13 49-62 19-31 (71)
287 2enf_A Zinc finger protein 347 21.8 31 0.0011 19.1 1.0 15 19-33 10-24 (46)
288 1e4u_A Transcriptional repress 21.7 27 0.00092 23.0 0.7 51 4-62 10-61 (78)
289 2enh_A Zinc finger protein 28 21.7 31 0.0011 19.1 1.0 16 18-33 9-24 (46)
290 2ee8_A Protein ODD-skipped-rel 21.6 38 0.0013 22.8 1.6 10 7-16 19-28 (106)
291 2epr_A POZ-, at HOOK-, and zin 21.5 30 0.001 19.5 0.9 16 18-33 9-24 (48)
292 1ovx_A ATP-dependent CLP prote 21.5 22 0.00074 23.0 0.2 14 50-63 39-52 (67)
293 2ytf_A Zinc finger protein 268 21.5 35 0.0012 18.8 1.1 16 18-33 9-24 (46)
294 2yrj_A Zinc finger protein 473 21.4 35 0.0012 18.8 1.1 15 19-33 10-24 (46)
295 3j20_P 30S ribosomal protein S 21.4 70 0.0024 19.8 2.5 34 17-62 14-47 (56)
296 2eon_A ZFP-95, zinc finger pro 21.3 32 0.0011 19.1 1.0 16 18-33 9-24 (46)
297 3iz5_m 60S ribosomal protein L 21.1 43 0.0015 23.1 1.6 11 23-33 56-66 (92)
298 2yts_A Zinc finger protein 484 20.9 36 0.0012 18.7 1.1 15 19-33 10-24 (46)
299 2eom_A ZFP-95, zinc finger pro 20.9 32 0.0011 19.1 0.9 14 19-32 10-23 (46)
300 2eou_A Zinc finger protein 473 20.8 31 0.0011 18.9 0.8 14 19-32 10-23 (44)
301 2enc_A Zinc finger protein 224 20.8 37 0.0013 18.7 1.1 15 19-33 10-24 (46)
302 2emb_A Zinc finger protein 473 20.7 36 0.0012 18.5 1.1 15 19-33 10-24 (44)
303 2yu5_A Zinc finger protein 473 20.6 37 0.0013 18.5 1.1 15 19-33 10-24 (44)
304 2y43_A E3 ubiquitin-protein li 20.5 27 0.00091 23.9 0.5 46 6-62 23-68 (99)
305 2ytb_A Zinc finger protein 32; 20.5 34 0.0012 18.3 0.9 15 19-33 9-23 (42)
306 2eor_A Zinc finger protein 224 20.5 37 0.0013 18.7 1.1 14 19-32 10-23 (46)
307 2eq2_A Zinc finger protein 347 20.4 33 0.0011 19.0 0.9 16 18-33 9-24 (46)
308 2em4_A Zinc finger protein 28 20.3 38 0.0013 18.7 1.2 15 19-33 10-24 (46)
309 2en9_A Zinc finger protein 28 20.3 35 0.0012 18.9 1.0 14 19-32 10-23 (46)
310 2lk0_A RNA-binding protein 5; 20.2 33 0.0011 18.4 0.8 16 14-29 12-27 (32)
311 2ep0_A Zinc finger protein 28 20.2 38 0.0013 18.7 1.1 16 18-33 9-24 (46)
312 2kmk_A Zinc finger protein GFI 20.2 38 0.0013 21.4 1.3 9 8-16 4-12 (82)
313 2eos_A B-cell lymphoma 6 prote 20.2 36 0.0012 18.3 1.0 15 19-33 9-23 (42)
314 2eoy_A Zinc finger protein 473 20.2 39 0.0013 18.7 1.1 15 19-33 10-24 (46)
315 2en2_A B-cell lymphoma 6 prote 20.2 38 0.0013 18.1 1.1 15 19-33 9-23 (42)
316 2dlq_A GLI-kruppel family memb 20.1 56 0.0019 22.5 2.3 9 8-16 38-46 (124)
317 2em7_A Zinc finger protein 224 20.1 38 0.0013 18.6 1.1 16 18-33 9-24 (46)
318 2eq0_A Zinc finger protein 347 20.1 38 0.0013 18.7 1.1 15 19-33 10-24 (46)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.3e-26 Score=187.54 Aligned_cols=127 Identities=23% Similarity=0.325 Sum_probs=91.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCcc--------------------------ccccchHHHHHHHcCCHHHHHHHHHC
Q 022927 161 GSTSNSNFSSIFNPGQVTNGATDKPRME--------------------------YEVNGEGLRDAIKNGDAAAVKKLLSE 214 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~~~~~~~~--------------------------~~~~~t~Lh~A~~~g~~~~v~~Ll~~ 214 (290)
..++.+.++.|++.|++++..+..+.++ ...|.||||+|+..|+.+++++||++
T Consensus 13 ~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 92 (169)
T 4gpm_A 13 ENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 92 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3445555566666666665555444331 12355688888888888888888888
Q ss_pred CCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCC
Q 022927 215 GVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 287 (290)
Q Consensus 215 g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~ 287 (290)
|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|+++||+++..
T Consensus 93 gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 93 GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 8888888888888888888888888888888888888888888888888888888888888888888888753
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=7.9e-27 Score=188.75 Aligned_cols=103 Identities=26% Similarity=0.370 Sum_probs=99.0
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhh
Q 022927 187 MEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAP 266 (290)
Q Consensus 187 ~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~ 266 (290)
.....|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|.+|+||||+|+
T Consensus 32 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~ 111 (169)
T 4gpm_A 32 ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAA 111 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHhCCCCCCCCCC
Q 022927 267 VTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 267 ~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
..|+.+++++|+++|||++.+|.
T Consensus 112 ~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 112 ENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHcCCCccccCC
Confidence 99999999999999999998874
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=7.8e-25 Score=158.85 Aligned_cols=92 Identities=32% Similarity=0.425 Sum_probs=89.4
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCH
Q 022927 192 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 271 (290)
Q Consensus 192 ~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~ 271 (290)
|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCC
Q 022927 272 KMRQKMEEDKNN 283 (290)
Q Consensus 272 ~iv~~Ll~~GAd 283 (290)
+++++|+++||+
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999986
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=6.6e-25 Score=176.67 Aligned_cols=129 Identities=23% Similarity=0.367 Sum_probs=118.9
Q ss_pred cccccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHH
Q 022927 154 ENTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAA 233 (290)
Q Consensus 154 ~~~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~ 233 (290)
......+..+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVNAEDASGWT-------PLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 3445556778889999999999999887766554 999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 234 LFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 234 ~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998764
No 5
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=1.3e-24 Score=172.70 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=107.6
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCc-HHHHHHHcC
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMS-LLHLAALFN 236 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~T-pLh~A~~~g 236 (290)
.....+..+++++|++.|++++..+..+.+ |||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|
T Consensus 18 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 18 TAAARGRVEEVRALLEAGANPNAPNSYGRR-------PIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCSSSCC-------TTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 334567788899999999999887766555 899985 99999999999999999999999999 999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 237 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 237 ~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999998764
No 6
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=2e-24 Score=167.69 Aligned_cols=121 Identities=21% Similarity=0.305 Sum_probs=107.9
Q ss_pred cccccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHH
Q 022927 154 ENTARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAA 233 (290)
Q Consensus 154 ~~~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~ 233 (290)
......+..+..+.+++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMANGADVNAKDEYGLT-------PLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3344445677788899999999998887765554 999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC
Q 022927 234 LFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 234 ~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 281 (290)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999987
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.7e-24 Score=168.16 Aligned_cols=120 Identities=20% Similarity=0.223 Sum_probs=108.9
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccC-CCcHHHHHHH
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQ-GMSLLHLAAL 234 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~-g~TpLh~A~~ 234 (290)
.......+..+++++|++.|++++..+..+.+ |||+|+. |+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 16 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 16 LATAAARGQVETVRQLLEAGADPNALNRFGRR-------PIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCT-------TTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCC-------HHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHH
Confidence 33345567788899999999998887765554 8999999 9999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC
Q 022927 235 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 235 ~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 283 (290)
.|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|||
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999986
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=182.27 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=116.3
Q ss_pred ccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcC
Q 022927 157 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN 236 (290)
Q Consensus 157 ~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g 236 (290)
...+..+..+++++|++.|++++..+..+.+ |||+|+..++.+++++|+++|+++|.+|..|+||||+|+..|
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t-------~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAGARNADQAV-------PLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HHHHHcCcHHHHHHHHhcCCCcCccCCCCCC-------ccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 3345667788999999999998887766655 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 237 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 237 ~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++||++|+++|.+|..|+||||+|+..|+.++|++|+++|||+|++|.
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999875
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=2.6e-23 Score=158.45 Aligned_cols=99 Identities=22% Similarity=0.228 Sum_probs=94.7
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 270 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~ 270 (290)
.+.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 022927 271 YKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 271 ~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++.+|.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCcCC
Confidence 9999999999999998874
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=1.5e-23 Score=165.90 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=109.0
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHH
Q 022927 162 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 241 (290)
Q Consensus 162 s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv 241 (290)
.++.+.+++|++.|.+.+ .+. .|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++
T Consensus 12 ~g~~~~v~~Ll~~g~~~~-~~~-------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 83 (153)
T 1awc_B 12 AGQDDEVRILMANGAPFT-TDW-------LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV 83 (153)
T ss_dssp HTCHHHHHHHHHHTCCCC-CCT-------TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCC-cCC-------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHH
Confidence 456677888999888664 222 345699999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 242 FILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 242 ~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 84 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 84 EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 999999999999999999999999999999999999999999998764
No 11
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=4.7e-23 Score=164.79 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=102.3
Q ss_pred CCCCCcccccccCC-CCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 161 GSTSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
..++.+.++.|++. +.+.+..+.. +.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 17 ~~g~~~~v~~ll~~~~~~~~~~~~~-------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 89 (165)
T 3twr_A 17 KAGDVETVKKLCTVQSVNCRDIEGR-------QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYE 89 (165)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCTTTT-------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HhCCHHHHHHHHHcCCCCccccccC-------CCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHH
Confidence 34556677777764 3344433333 345899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 90 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 90 VAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 99999999999999999999999999999999999999999999988764
No 12
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=5.7e-23 Score=159.45 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=92.8
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 270 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~ 270 (290)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH 88 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCC
Confidence 45569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 022927 271 YKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 271 ~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++..|.
T Consensus 89 ~~~v~~Ll~~ga~~~~~~~ 107 (137)
T 3c5r_A 89 VDIVKLLLSYGASRNAVNI 107 (137)
T ss_dssp HHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCCCC
Confidence 9999999999999998864
No 13
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=3.3e-23 Score=168.14 Aligned_cols=94 Identities=26% Similarity=0.304 Sum_probs=49.9
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHH
Q 022927 195 GLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMR 274 (290)
Q Consensus 195 ~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv 274 (290)
|||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 42 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v 121 (179)
T 3f6q_A 42 PLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHhCCCCCCCCC
Q 022927 275 QKMEEDKNNVGSTT 288 (290)
Q Consensus 275 ~~Ll~~GAdin~~~ 288 (290)
++|+++|++++..|
T Consensus 122 ~~Ll~~ga~~~~~~ 135 (179)
T 3f6q_A 122 EDLVANGALVSICN 135 (179)
T ss_dssp HHHHHTTCCSSBCC
T ss_pred HHHHHCCCCcchhc
Confidence 55555555554443
No 14
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=2.7e-23 Score=166.53 Aligned_cols=123 Identities=23% Similarity=0.207 Sum_probs=111.3
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
+..+..+.+++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 11 ~~~g~~~~v~~ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (167)
T 3v31_A 11 AAQGEMLYLATRIEQENVINHTDEEGFT-------PLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTD 83 (167)
T ss_dssp HHTTCHHHHHHHHHHSSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHCCCHHHHHHHHHcCCCcCCCCCCCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 4456778889999998888877766555 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 84 IVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999988764
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=4e-23 Score=166.35 Aligned_cols=122 Identities=20% Similarity=0.197 Sum_probs=91.7
Q ss_pred CCCCCcccccccCCCCC-CCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 161 GSTSNSNFSSIFNPGQV-TNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
..++.+.++.|++.+.. ++..+..+. ||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~-------t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 11 AQGELDQLKEHLRKGDNLVNKPDERGF-------TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp HTTCHHHHHHHHTTCSGGGGCCCTTSC-------CHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHcCcccccCCCCCCC-------CHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 34556667777777665 444444433 4788888888888888888888888888878888888888888888
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 88888888888888888888888888888888888888888888777653
No 16
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=2.2e-23 Score=177.26 Aligned_cols=122 Identities=20% Similarity=0.250 Sum_probs=82.9
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+.++.|++.|++++.. ..+.|+||+|+..|+.+++++||+.|+++|.+|..|+||||+|+..|+.
T Consensus 12 a~~~~~~~~~~~ll~~g~~~~~~--------~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 83 (239)
T 1ycs_B 12 GKRTNLRKTGSERIAHGMRVKFN--------PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT 83 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCH
T ss_pred hhhhhhHHHHHHHhccCCCcccC--------chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 34455667778888888887642 1345688888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceec
Confidence 88888888888888888888888888888888888888888888888765
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=3.3e-23 Score=169.87 Aligned_cols=123 Identities=22% Similarity=0.269 Sum_probs=113.9
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+.+++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 43 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (192)
T 2rfm_A 43 CMLGMENAIDKLVENFDKLEDKDIEGST-------ALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE 115 (192)
T ss_dssp HHHTCGGGHHHHHHHHCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHhccccccccccCcc-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 4456778899999999988877665554 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 165 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999998764
No 18
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=4e-23 Score=157.00 Aligned_cols=115 Identities=28% Similarity=0.371 Sum_probs=106.7
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHH
Q 022927 162 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 241 (290)
Q Consensus 162 s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv 241 (290)
.+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++
T Consensus 12 ~~~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 84 (126)
T 1n0r_A 12 NGHLEVVKLLLEAGADVNAKDKNGRT-------PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84 (126)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCc-------HHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHH
Confidence 34567788999999888877665554 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC
Q 022927 242 FILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 242 ~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 283 (290)
++|+++|++++.+|..|+|||++|+..|+.+++++|+++|||
T Consensus 85 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 85 KLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999997
No 19
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=1.2e-23 Score=158.28 Aligned_cols=99 Identities=30% Similarity=0.432 Sum_probs=94.9
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 270 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~ 270 (290)
.|.|+||+|+..|+.+++++|+++|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC
Confidence 45669999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 022927 271 YKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 271 ~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|||+|..+.
T Consensus 88 ~~~~~~Ll~~ga~~n~~~~ 106 (115)
T 2l6b_A 88 HEIVKLLDAKGADVNARSW 106 (115)
T ss_dssp HHHHHHHHTTSSSHHHHSC
T ss_pred HHHHHHHHHcCCCCCcCCc
Confidence 9999999999999987653
No 20
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=4.4e-23 Score=164.21 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=102.9
Q ss_pred CCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHH
Q 022927 163 TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAF 242 (290)
Q Consensus 163 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~ 242 (290)
+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 120 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFA-------VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 7788889999999998887765554 899999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCC-CCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC
Q 022927 243 ILMESGAN-MDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 243 ~Ll~~Ga~-in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 283 (290)
+|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 121 ~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999998 699999999999999999999999999999986
No 21
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=9.9e-23 Score=172.48 Aligned_cols=123 Identities=17% Similarity=0.181 Sum_probs=103.1
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 28 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-------pLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 28 AALTGELEVVQQAVKEMNDPSQPNEEGIT-------ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHTCHHHHHHHHHHSSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 35667778888888888888776665554 88888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCCCC-CCCCChhhhh--hccCCHHHHHHHHhCCCCCCCCC
Q 022927 239 DIAFILMESGANMDCKN-AQGESPLDCA--PVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d-~~G~TpL~~A--~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++++..|
T Consensus 101 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 101 VICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp HHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 88888888888888886 5888888888 88888888888888888888775
No 22
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=1.1e-22 Score=157.89 Aligned_cols=100 Identities=24% Similarity=0.385 Sum_probs=95.9
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccC
Q 022927 190 EVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTL 269 (290)
Q Consensus 190 ~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g 269 (290)
..+.|+||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 34667999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCC
Q 022927 270 QYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 270 ~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|+++|++++..|.
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHHHcCCCCcCcCC
Confidence 99999999999999998764
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=5.6e-23 Score=163.61 Aligned_cols=121 Identities=19% Similarity=0.285 Sum_probs=111.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHH
Q 022927 161 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 240 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~i 240 (290)
..+..+.+++|++.|.+++..+..+.+ |||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 14 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 85 (162)
T 1ihb_A 14 ARGDLEQLTSLLQNNVNVNAQNGFGRT-------ALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT 85 (162)
T ss_dssp HHTCHHHHHHHTTSCCCTTCCCTTSCC-------HHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HcCCHHHHHHHHhCCCCccccCccCcc-------HHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 446678889999999998887766555 9999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC-CCCCCC
Q 022927 241 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN-VGSTTS 289 (290)
Q Consensus 241 v~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-in~~~~ 289 (290)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..|.
T Consensus 86 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 135 (162)
T 1ihb_A 86 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH 135 (162)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCC
Confidence 9999999999999999999999999999999999999999998 577653
No 24
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=6.2e-23 Score=159.22 Aligned_cols=106 Identities=17% Similarity=0.245 Sum_probs=97.8
Q ss_pred CCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 022927 176 QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN 255 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d 255 (290)
.+++..+..+. ||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|
T Consensus 3 ~~~~~~~~~g~-------t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~ 74 (136)
T 1d9s_A 3 PGIHMLGGSSD-------AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74 (136)
T ss_dssp CCCSCCCCCCS-------CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB
T ss_pred CCccCCCCCCc-------cHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC
Confidence 34455554444 49999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CC-CCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 256 AQ-GESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 256 ~~-G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.. |+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 99 99999999999999999999999999998874
No 25
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.6e-23 Score=176.07 Aligned_cols=117 Identities=21% Similarity=0.234 Sum_probs=101.1
Q ss_pred cccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHC
Q 022927 168 FSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMES 247 (290)
Q Consensus 168 ~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 247 (290)
++.|++.|++.+..+..+. .+.|+||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~----~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARL----NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp ---------CCCCCCCTTS----CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CeehhccCCCCcccccccc----chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4678888988877665444 356799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 248 GANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 248 Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
|++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 77 ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 77 GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999999999999999999874
No 26
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=9.3e-23 Score=165.45 Aligned_cols=124 Identities=23% Similarity=0.267 Sum_probs=115.2
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
.....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 45 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 45 WACREGRSAVVEMLIMRGARINVMNRGDDT-------PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQ 117 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 334566778999999999999887766555 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
.+++++|+++|++++.+|..|+|||++|+..++.+++++|+++|++++..+
T Consensus 118 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 118 DQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp HHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred HHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 999999999999999999999999999999999999999999999998764
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.88 E-value=3.6e-22 Score=172.51 Aligned_cols=99 Identities=21% Similarity=0.227 Sum_probs=94.1
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCccccc-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK-QGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTL 269 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g 269 (290)
.|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 456799999999999999999999999999985 4999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCC
Q 022927 270 QYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 270 ~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|+++||+++.+|.
T Consensus 237 ~~~~v~~Ll~~ga~~~~~~~ 256 (282)
T 1oy3_D 237 NPILARLLRAHGAPEPEDGG 256 (282)
T ss_dssp CHHHHHHHHHTTCCCCCCC-
T ss_pred CcHHHHHHHHcCCCcCcCCC
Confidence 99999999999999998874
No 28
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=6.5e-23 Score=165.09 Aligned_cols=123 Identities=20% Similarity=0.163 Sum_probs=113.7
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 43 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 115 (172)
T 3v30_A 43 ASAFGEIETVRFLLEWGADPHILAKERES-------ALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV 115 (172)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTCCC-------HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCchhhcccCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34567788999999999999887766555 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++...+
T Consensus 116 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 116 KCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165 (172)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999877655
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=3.2e-22 Score=159.94 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=107.0
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
.....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 48 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 48 FAAGYNRVSVVEYLLQHGADVHAKDKGGLV-------PLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHcChHHHHHHHHhcCCCCCccCCCCCC-------HHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 334567788999999999999888776555 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKN 282 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 282 (290)
.+++++|+++|++++.+|..|+||||+|.. ++.+++++|+++||
T Consensus 121 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 121 YEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999887 89999999999997
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.5e-22 Score=173.21 Aligned_cols=118 Identities=19% Similarity=0.208 Sum_probs=104.4
Q ss_pred CcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHH
Q 022927 165 NSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFIL 244 (290)
Q Consensus 165 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~L 244 (290)
...+++|+..|++++..+..+.+ |||+|+..|+.++|++|++.|++++..+..|.||||+|+..++.+++++|
T Consensus 66 ~~~v~~Ll~~Gadvn~~d~~G~T-------pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 66 QKRLAKVPASGLGVNVTSQDGSS-------PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp ---------CCCCTTCCCTTSCC-------HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHH
Confidence 35678999999999988776655 99999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 245 MESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 245 l~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+++|+++|.+|..|+||||+|+..|+.+++++|+++|||+|..+.
T Consensus 139 l~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 139 LDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp HHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 999999999999999999999999999999999999999998864
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.87 E-value=5.8e-22 Score=166.21 Aligned_cols=123 Identities=16% Similarity=0.086 Sum_probs=112.3
Q ss_pred CCCCCCcccccccCCC--CCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 160 RGSTSNSNFSSIFNPG--QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g--~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
...+..+++++|++.| .+++..+..+. ||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~-------t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDLNKITNQGV-------TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCTTCCCTTCC-------CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHhCCCCcccccCCcCCC-------CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 3456678889999998 66666665554 49999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCC-CCCCCCCCCCCChhhhhhccCCHHHHHHHH-hCCCCCCCCCC
Q 022927 238 TDIAFILMESG-ANMDCKNAQGESPLDCAPVTLQYKMRQKME-EDKNNVGSTTS 289 (290)
Q Consensus 238 ~~iv~~Ll~~G-a~in~~d~~G~TpL~~A~~~g~~~iv~~Ll-~~GAdin~~~~ 289 (290)
.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ ++|+|++..|.
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 99999999999 999999999999999999999999999999 89999998874
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.87 E-value=6e-22 Score=166.56 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=112.3
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNAVNQNGCT-------PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCHHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 3456678889999999998877665554 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 154 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 154 MVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203 (231)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998764
No 33
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=1.3e-22 Score=172.58 Aligned_cols=124 Identities=22% Similarity=0.164 Sum_probs=114.0
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
.....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++||++|+++|.+|..|+||||+|+..|+
T Consensus 43 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 43 DSSLEGEFDLVQRIIYEVDDPSLPNDEGIT-------ALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp HHHHHTCHHHHHHHTSTTSSCCCCCTTSCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 334567788999999999999888766655 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCC-Chhhhh--hccCCHHHHHHHHhCCCCCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGE-SPLDCA--PVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~-TpL~~A--~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++|++++..+
T Consensus 116 ~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 116 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169 (239)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred HHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence 9999999999999999998887 999999 78899999999999999998764
No 34
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=8.5e-22 Score=166.56 Aligned_cols=126 Identities=19% Similarity=0.168 Sum_probs=69.6
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccc--------------------------------cccchHHHHHHHcCCHH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEY--------------------------------EVNGEGLRDAIKNGDAA 206 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~--------------------------------~~~~t~Lh~A~~~g~~~ 206 (290)
....+..+++++|++.|++++..+..+.++. ..|.||||+|+..|+.+
T Consensus 52 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 131 (236)
T 1ikn_D 52 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG 131 (236)
T ss_dssp HHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHH
Confidence 3445667788888888888877665554411 12344555555555555
Q ss_pred HHHHHHHCCCCCccccc-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCC
Q 022927 207 AVKKLLSEGVDANFCDK-QGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 284 (290)
Q Consensus 207 ~v~~Ll~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdi 284 (290)
++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++||+.
T Consensus 132 ~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 132 IVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp HHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 55555555555555554 5555555555555555555555555555555555555555555555555555555555543
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.87 E-value=3.5e-22 Score=171.02 Aligned_cols=122 Identities=24% Similarity=0.270 Sum_probs=104.6
Q ss_pred CCCCCcccccccCCCC-CCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 161 GSTSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
..+..+++++|++.+. +++..+..+ .||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 99 ~~~~~~~v~~Ll~~~~~~~~~~~~~g-------~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 171 (253)
T 1yyh_A 99 SADAQGVFQILIRNRATDLDARMHDG-------TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 171 (253)
T ss_dssp HHTCHHHHHHHHHSTTSCTTCCCTTC-------CCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCC-------CcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 3455566777777665 555554444 45899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++||+++.+|.
T Consensus 172 ~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 172 AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999999999999999999999999988774
No 36
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=6.8e-22 Score=165.83 Aligned_cols=99 Identities=20% Similarity=0.199 Sum_probs=91.1
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCChhhhhhccC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMES-GANMDCKNAQGESPLDCAPVTL 269 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-Ga~in~~d~~G~TpL~~A~~~g 269 (290)
.+.|+||+|+..|+.+++++||+.|++++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 456799999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCC
Q 022927 270 QYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 270 ~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|+++||+++.+|.
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCT
T ss_pred CHHHHHHHHHcCCCCccccC
Confidence 99999999999999988764
No 37
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.87 E-value=6.3e-22 Score=159.13 Aligned_cols=116 Identities=22% Similarity=0.299 Sum_probs=107.7
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 126 (169)
T 2y1l_E 54 AAFNGHLEIVEVLLKNGADVNAVDHAGMT-------PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL 126 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34566778899999999998887766554 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 281 (290)
+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|
T Consensus 127 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 127 EIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999987
No 38
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2.8e-22 Score=188.25 Aligned_cols=129 Identities=19% Similarity=0.173 Sum_probs=110.5
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHH---cCCHHHHHHHHHCCCCCcccccCCCcHHHHHHH
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIK---NGDAAAVKKLLSEGVDANFCDKQGMSLLHLAAL 234 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~---~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~ 234 (290)
.....++...++.|+..|++++..... ......|.||||+|+. .|+.+++++||++|+++|.+|..|+||||+|+.
T Consensus 138 ~A~~~g~~~~v~~ll~~g~~~n~~~~~-~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~ 216 (497)
T 3lvq_E 138 TAICNRDLLSVLEAFANGQDFGQPLPG-PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 216 (497)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSSCBCC-SSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTT
T ss_pred HHHhccCHHHHHHHHhhcccccCCCCC-cccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Confidence 334567778889999999998876221 1123356679999976 899999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCC
Q 022927 235 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 287 (290)
Q Consensus 235 ~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~ 287 (290)
.|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++||+++.+
T Consensus 217 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 217 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp TTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999875
No 39
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.9e-21 Score=147.61 Aligned_cols=98 Identities=31% Similarity=0.428 Sum_probs=94.8
Q ss_pred cchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCH
Q 022927 192 NGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQY 271 (290)
Q Consensus 192 ~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~ 271 (290)
|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCC
Q 022927 272 KMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 272 ~iv~~Ll~~GAdin~~~~ 289 (290)
+++++|+++|++++.+|.
T Consensus 82 ~~~~~Ll~~g~~~~~~~~ 99 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDK 99 (126)
T ss_dssp HHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHcCCCCcccCC
Confidence 999999999999998763
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.86 E-value=9.8e-22 Score=165.51 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=58.2
Q ss_pred CCCcccccccCC-CCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCC-----cccccCCCcHHHHHHHcC
Q 022927 163 TSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDA-----NFCDKQGMSLLHLAALFN 236 (290)
Q Consensus 163 ~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~v-----n~~d~~g~TpLh~A~~~g 236 (290)
+..+.++.|++. |.+++..+..+.+ |||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|
T Consensus 14 g~~~~v~~Ll~~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 14 NDVQALSKLLKFEGCEVHQRGAMGET-------ALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp TCHHHHHHHHTTTCSCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCCcccCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcC
Confidence 334444555544 5555444433333 455555555555555555554443 333444555555555555
Q ss_pred CHHHHHHHHHCCCCCCCCCC-------------CCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 237 RTDIAFILMESGANMDCKNA-------------QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 237 ~~~iv~~Ll~~Ga~in~~d~-------------~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|+|++.+|
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d 151 (232)
T 2rfa_A 87 NVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD 151 (232)
T ss_dssp CHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 55555555555555544433 35555555555555555555555555554443
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=1.4e-21 Score=163.36 Aligned_cols=121 Identities=24% Similarity=0.273 Sum_probs=82.9
Q ss_pred CCCCCcccccccCCCC-CCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 161 GSTSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
..+..+++++|++.+. +++..+..+ .||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g-------~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 139 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDG-------TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 139 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTC-------CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCC-------CcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH
Confidence 3445556666666554 444443333 33777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 140 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 140 AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 7777777777777777777777777777777777777777777776665
No 42
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=1e-21 Score=155.43 Aligned_cols=112 Identities=21% Similarity=0.238 Sum_probs=62.0
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
+..+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASPNVQDTSGTS-------PVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHH
Confidence 4444555555555555555544443332 555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHh
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEE 279 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 279 (290)
++++|+++ ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 116 ~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 116 VVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 55555555 5555555555555555555555555555554
No 43
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=1.3e-21 Score=154.82 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=107.0
Q ss_pred CCCCcccccccCC-CCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHH
Q 022927 162 STSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 240 (290)
Q Consensus 162 s~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~i 240 (290)
.++.+.++.|++. +.+++..+..+. ||||+ +..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~-------t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 83 (156)
T 1bd8_A 12 RGDVQEVRRLLHRELVHPDALNRFGK-------TALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDT 83 (156)
T ss_dssp HTCHHHHHHHHHTTCCCTTCCCTTSC-------CHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred hCCHHHHHHHHHhhCcCccccCCCCC-------cHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 4556777888877 336666665544 49999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 241 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 241 v~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..|.
T Consensus 84 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 84 LKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 9999999999999999999999999999999999999999 99988764
No 44
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.3e-21 Score=159.41 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=94.8
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCChhhhhhcc
Q 022927 190 EVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN-AQGESPLDCAPVT 268 (290)
Q Consensus 190 ~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d-~~G~TpL~~A~~~ 268 (290)
..|.||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 457789999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCC
Q 022927 269 LQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 269 g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+.+++++|+++|++++.+|.
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCT
T ss_pred CcHHHHHHHHHcCCCCcCCCC
Confidence 999999999999999998874
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=1.5e-21 Score=170.34 Aligned_cols=124 Identities=17% Similarity=0.196 Sum_probs=106.7
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCccccc---------------
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK--------------- 223 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~--------------- 223 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|.
T Consensus 80 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-------pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 80 ACIDDNVDMVKFLVENGANINQPDNEGWI-------PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchH
Confidence 34566778888899988888877665554 89999999999999999999988876553
Q ss_pred ---------------------------------------------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 022927 224 ---------------------------------------------QGMSLLHLAALFNRTDIAFILMESGANMDCKNAQG 258 (290)
Q Consensus 224 ---------------------------------------------~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G 258 (290)
.|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 153 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g 232 (299)
T 1s70_B 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232 (299)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred HHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence 46788888999999999999999999999999999
Q ss_pred CChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 259 ESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 259 ~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+||||+|+..|+.+++++|+++|||++++|.
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999999998874
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.85 E-value=2.7e-21 Score=163.18 Aligned_cols=124 Identities=24% Similarity=0.242 Sum_probs=112.8
Q ss_pred CCCCCCCcccccccCCC-CCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 159 SRGSTSNSNFSSIFNPG-QVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
....+..+++++|++.| .+++..+..+. ||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-------t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGW-------TPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSC-------CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCC-------CHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCC
Confidence 34556778889999988 67766665544 49999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 208 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCC
Confidence 9999999999999999999999999999999999999999999999998874
No 47
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.4e-21 Score=170.26 Aligned_cols=123 Identities=15% Similarity=0.175 Sum_probs=106.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHc---CCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 161 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
..++...+..++..|.+++.... -......|.||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+
T Consensus 139 ~~~d~~~~~~ll~~g~~~~~~~~-l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 139 KTRDIFGLLQAYADGVDLTEKIP-LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HTTCHHHHHHHHHTTCCTTSBCC-CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhcccHHHHHHHHhhcchhhhcc-ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence 45556667778888887654321 111123567799999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 284 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdi 284 (290)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999964
No 48
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=6.5e-22 Score=157.04 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=93.7
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-hhhhhhccC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGES-PLDCAPVTL 269 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~T-pL~~A~~~g 269 (290)
.+.|+||+|+..|+.+++++|+++|++++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 4567999999999999999999999999999999999999985 99999999999999999999999999 999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCC
Q 022927 270 QYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 270 ~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|+++|++++.+|.
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~ 109 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDA 109 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCT
T ss_pred CHHHHHHHHHcCCCCcccCC
Confidence 99999999999999998864
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=2.2e-21 Score=153.30 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=104.3
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 41 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 113 (153)
T 1awc_B 41 AAQYGHFSTTEVLLRAGVSRDARTKVDRT-------PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ 113 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34456778899999999999887766554 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHH
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKM 277 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~L 277 (290)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 114 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 114 EVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999987
No 50
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=2.6e-21 Score=162.67 Aligned_cols=123 Identities=26% Similarity=0.285 Sum_probs=113.0
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+
T Consensus 48 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 48 CSAGHTEIVEFLLQLGVPVNDKDDAGWS-------PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHE 120 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCcHHHHHHHHHhCCCCCCcCCCCCC-------HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 4456778889999999998887766554 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 121 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC
Confidence 99999999999999999999999999999999999999999999998764
No 51
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=1.2e-21 Score=160.59 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=73.8
Q ss_pred ccchHHHHHHHcCCH----HHHHHHHHCCCCCcccccCCCcHHHHHHHcCC------HHHHHHHHHCCCCCCCCCCCCC-
Q 022927 191 VNGEGLRDAIKNGDA----AAVKKLLSEGVDANFCDKQGMSLLHLAALFNR------TDIAFILMESGANMDCKNAQGE- 259 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~----~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~------~~iv~~Ll~~Ga~in~~d~~G~- 259 (290)
.|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..++ .+++++|+++|+++|.+|..|+
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 355678888877764 47778888888888888788888888777776 4677788888888888887787
Q ss_pred ChhhhhhccC-----CHHHHHHHHh-CCCCCCCCCC
Q 022927 260 SPLDCAPVTL-----QYKMRQKMEE-DKNNVGSTTS 289 (290)
Q Consensus 260 TpL~~A~~~g-----~~~iv~~Ll~-~GAdin~~~~ 289 (290)
||||+|+..+ +.+++++|++ +|||++++|.
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC
Confidence 8888877733 3557778887 7888877764
No 52
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=2.7e-21 Score=166.72 Aligned_cols=124 Identities=19% Similarity=0.194 Sum_probs=114.8
Q ss_pred CCCCCCcccccccCC-CCCCCCCCCCCCccccccchHHHHHHHcCC----HHHHHHHHHCCCCCcccccCCCcHHHHHHH
Q 022927 160 RGSTSNSNFSSIFNP-GQVTNGATDKPRMEYEVNGEGLRDAIKNGD----AAAVKKLLSEGVDANFCDKQGMSLLHLAAL 234 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~----~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~ 234 (290)
...+..+++++|++. |.+++..+..+.+ |||+|+..++ .+++++|+++|++++.+|..|+||||+|+.
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t-------~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRN-------ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 228 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCC-------HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCC-------HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 445667888999987 9998887766555 9999999999 999999999999999999999999999999
Q ss_pred cCCHHHHHHHHH-CCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCCC
Q 022927 235 FNRTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTSV 290 (290)
Q Consensus 235 ~g~~~iv~~Ll~-~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~~ 290 (290)
.|+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|+++||+++.+|.+
T Consensus 229 ~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~~ 285 (285)
T 1wdy_A 229 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285 (285)
T ss_dssp TTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSCC
T ss_pred cCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccccC
Confidence 999999999999 79999999999999999999999999999999999999999864
No 53
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=4e-22 Score=167.23 Aligned_cols=121 Identities=21% Similarity=0.199 Sum_probs=101.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHC-CCCCcccccCCCcHHHHHHHcCCHH
Q 022927 161 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSE-GVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~-g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
..+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++||+. |+++|.+|..|+||||+|+..|+.+
T Consensus 82 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 82 KRGNLSWLRECLDNRVGVNGLDKAGST-------ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYAD 154 (222)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHH
T ss_pred ccCcHHHHHHHHhCCCCccccCCCCCC-------HHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHH
Confidence 445678889999999999887766555 99999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
++++|+++|++++.+|..|+|||++|+..++.++++.|++.|++.+..|
T Consensus 155 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 155 IVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 9999999999999999999999999999999999999999999987765
No 54
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.85 E-value=2.2e-21 Score=163.86 Aligned_cols=123 Identities=19% Similarity=0.201 Sum_probs=109.3
Q ss_pred CCCCCCcccccccCCCC----CCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccc-cCCCcHHHHHHH
Q 022927 160 RGSTSNSNFSSIFNPGQ----VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAAL 234 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~----~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d-~~g~TpLh~A~~ 234 (290)
...+..+++++|++.+. +++..+.. |.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYD-------GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTT-------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 44566778888888776 45544444 4459999999999999999999999999998 789999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 235 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 235 ~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 160 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp TTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999998864
No 55
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=1.6e-21 Score=166.94 Aligned_cols=126 Identities=15% Similarity=0.136 Sum_probs=111.0
Q ss_pred ccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCC-CCcccccCCCcHHHHHHHc
Q 022927 157 ARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV-DANFCDKQGMSLLHLAALF 235 (290)
Q Consensus 157 ~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~-~vn~~d~~g~TpLh~A~~~ 235 (290)
......+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|. +++..|..|+||||+|+..
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 134 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASADANIQDNMGRT-------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Confidence 3334566778889999999988887765554 8999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 236 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 236 g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 188 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 188 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred ChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999988764
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=1.1e-21 Score=157.17 Aligned_cols=120 Identities=23% Similarity=0.161 Sum_probs=110.8
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 43 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 115 (167)
T 3v31_A 43 AAAHGQIAVVEFLLQNGADPQLLGKGRES-------ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV 115 (167)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHCCCHHHHHHHHHcCCCCCCcCCCCCc-------HHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 34556788999999999999887766554 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 285 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin 285 (290)
+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++++++.
T Consensus 116 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 116 KCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987643
No 57
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=3.1e-21 Score=158.74 Aligned_cols=123 Identities=17% Similarity=0.104 Sum_probs=104.3
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHH-HCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLL-SEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll-~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
...+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..|+.
T Consensus 47 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 119 (201)
T 3hra_A 47 VHNNDIEIAKALIDRGADINLQNSISDS-------PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI 119 (201)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCH
Confidence 3456677888899988888877765554 899999999999999998 56778888888899999999999999
Q ss_pred HHHHHHHHCC-CCCCCCCCCCCChhhhhhccCC-----HHHHHHHHhCCCCCCCCCC
Q 022927 239 DIAFILMESG-ANMDCKNAQGESPLDCAPVTLQ-----YKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 239 ~iv~~Ll~~G-a~in~~d~~G~TpL~~A~~~g~-----~~iv~~Ll~~GAdin~~~~ 289 (290)
+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|.
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 120 DNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 9999999888 8899999999999999998887 8899999999999888764
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=2.5e-21 Score=178.12 Aligned_cols=123 Identities=15% Similarity=0.200 Sum_probs=111.6
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|+++|..|..|+||||+|+..|+.+
T Consensus 253 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 325 (437)
T 1n11_A 253 AQEGHAEMVALLLSKQANGNLGNKSGLT-------PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK 325 (437)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCTTCCC-------HHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH
T ss_pred HHCCCHHHHHHHHhcCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH
Confidence 3455667788888888888776665554 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++||+++.+|.
T Consensus 326 ~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 326 LVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998764
No 59
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=6.7e-22 Score=153.37 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=103.6
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+.+++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 18 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 90 (137)
T 3c5r_A 18 SIKGDIPSVEYLLQNGSDPNVKDHAGWT-------PLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVD 90 (137)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCcCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHH
Confidence 4456778889999999999887766555 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 283 (290)
++++|+++|++++.+|..|+|||++|+..+..+++++|.+.+..
T Consensus 91 ~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 91 IVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 99999999999999999999999999999999999999887654
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.85 E-value=4.7e-22 Score=170.44 Aligned_cols=125 Identities=20% Similarity=0.172 Sum_probs=107.4
Q ss_pred CCCCCcccccccCCCCCCCCC----CCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccc--------------
Q 022927 161 GSTSNSNFSSIFNPGQVTNGA----TDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-------------- 222 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~----~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d-------------- 222 (290)
..+..+++++|++.|++.... +.........|.||||+|+..|+.++|++||++|++++..|
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 467788999999988654321 11111222356779999999999999999999999999998
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCChhhhhhccCC---------HHHHHHHHhCCCCCC
Q 022927 223 KQGMSLLHLAALFNRTDIAFILME---SGANMDCKNAQGESPLDCAPVTLQ---------YKMRQKMEEDKNNVG 285 (290)
Q Consensus 223 ~~g~TpLh~A~~~g~~~iv~~Ll~---~Ga~in~~d~~G~TpL~~A~~~g~---------~~iv~~Ll~~GAdin 285 (290)
..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|+++||+++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 689999999999999999999999 999999999999999999998777 799999999999983
No 61
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=2e-21 Score=167.72 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=108.3
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCC---------------------
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVD--------------------- 217 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~--------------------- 217 (290)
.+..+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++
T Consensus 52 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-------pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (282)
T 1oy3_D 52 AAILGEASTVEKLYAAGAGVLVAERGGHT-------ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124 (282)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTSCC-------HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchh
Confidence 34556778889999999998877765554 89999999999999999987755
Q ss_pred --------------------------CcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCChhhhhhccCC
Q 022927 218 --------------------------ANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQ-GESPLDCAPVTLQ 270 (290)
Q Consensus 218 --------------------------vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~-G~TpL~~A~~~g~ 270 (290)
++..|..|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~ 204 (282)
T 1oy3_D 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA 204 (282)
T ss_dssp -------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred cchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCC
Confidence 6777889999999999999999999999999999999854 9999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 022927 271 YKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 271 ~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++.+|.
T Consensus 205 ~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 205 ASVLELLLKAGADPTARMY 223 (282)
T ss_dssp HHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCccccc
Confidence 9999999999999998874
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=1.7e-21 Score=159.59 Aligned_cols=116 Identities=18% Similarity=0.184 Sum_probs=108.0
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (192)
T 2rfm_A 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKT-------PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS 147 (192)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34556778899999999998887766555 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 281 (290)
+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus 148 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 148 EIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999875
No 63
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=1.1e-20 Score=157.86 Aligned_cols=127 Identities=15% Similarity=0.132 Sum_probs=101.3
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCC-CCcccccCCCcHHHHHHH
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV-DANFCDKQGMSLLHLAAL 234 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~-~vn~~d~~g~TpLh~A~~ 234 (290)
.......+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|++++. +++..+..|+||||+|+.
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASADANIQDNMGRT-------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 33345666777778888888777766655444 7888888888888888888876 788888888888888888
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 235 FNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 235 ~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 8888888888888888888888888888888888888888888888888887753
No 64
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=4.5e-22 Score=141.05 Aligned_cols=61 Identities=20% Similarity=0.343 Sum_probs=55.1
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCC------Ccccccccchhhhccc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIH------TNVRVCADCFNSSSRT 64 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~------~~~rvC~~C~~~~~~~ 64 (290)
...+||.|+.+|++|+||||||.||+|||+.|+.+++++|.+++. +++|||+.||..|...
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~~ 79 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKS 79 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHSC
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhcc
Confidence 456899999999999999999999999999999999999988753 6799999999999643
No 65
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=3.3e-21 Score=164.49 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=94.7
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCChhhhhhcc
Q 022927 190 EVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKN-AQGESPLDCAPVT 268 (290)
Q Consensus 190 ~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d-~~G~TpL~~A~~~ 268 (290)
..|.||||+|+..|+.+++++||+ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 357789999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCC
Q 022927 269 LQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 269 g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+.+++++|+++|++++.+|.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHCCCCCCCCCC
Confidence 999999999999999998874
No 66
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.85 E-value=5.5e-21 Score=164.35 Aligned_cols=115 Identities=24% Similarity=0.203 Sum_probs=58.6
Q ss_pred CCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHH
Q 022927 163 TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAF 242 (290)
Q Consensus 163 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~ 242 (290)
+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.++++
T Consensus 47 g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~ 118 (261)
T 2xai_A 47 GHLSCVKILLKHGAQVNGVTADWHT-------PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVN 118 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHH
Confidence 3344444455544444444333332 45555555555555555555555443 223555555555555555555
Q ss_pred HHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCC
Q 022927 243 ILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 285 (290)
Q Consensus 243 ~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin 285 (290)
+|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++|
T Consensus 119 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 119 SLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5555555555555555555555555555555555555555554
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=3.9e-21 Score=165.33 Aligned_cols=121 Identities=17% Similarity=0.146 Sum_probs=110.9
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|++++..+ .+.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~--------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 148 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQPES--------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 148 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC--------TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCC--------CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHH
Confidence 44567788999999999887533 2556999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++. +..|+||||+|+..|+.+++++|+++|||++.+|.
T Consensus 149 ~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~ 197 (261)
T 2xai_A 149 CVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197 (261)
T ss_dssp HHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999995 88999999999999999999999999999998874
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=1.1e-21 Score=167.96 Aligned_cols=122 Identities=18% Similarity=0.199 Sum_probs=107.4
Q ss_pred CCCcccccccCCCCCCCCCCC----CCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccC-------------C
Q 022927 163 TSNSNFSSIFNPGQVTNGATD----KPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQ-------------G 225 (290)
Q Consensus 163 ~~~~~~~~Ll~~g~~~~~~~~----~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~-------------g 225 (290)
+..+++++|++.|++.+..+. ........|.||||+|+..|+.+++++|+++|++++..|.. |
T Consensus 57 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 57 GVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp TBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSC
T ss_pred chHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCC
Confidence 778999999999887764331 00111234677999999999999999999999999999876 9
Q ss_pred CcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCChhhhhhc--cCCHH-------HHHHHHhCCCCC
Q 022927 226 MSLLHLAALFNRTDIAFILME---SGANMDCKNAQGESPLDCAPV--TLQYK-------MRQKMEEDKNNV 284 (290)
Q Consensus 226 ~TpLh~A~~~g~~~iv~~Ll~---~Ga~in~~d~~G~TpL~~A~~--~g~~~-------iv~~Ll~~GAdi 284 (290)
+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|+++||++
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999999999999 999999999999999999998 88888 999999999999
No 69
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.7e-21 Score=176.02 Aligned_cols=120 Identities=23% Similarity=0.315 Sum_probs=108.3
Q ss_pred CCCC-CCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC
Q 022927 159 SRGS-TSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 159 ~~~s-~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
.+.. ++...+++|+..|++++..+. ...|.||||+|+..|+.+++++||++|+++|..|..|+||||+|+..|+
T Consensus 206 Aa~~~g~~~~v~~LL~~Gadvn~~~~-----~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 280 (368)
T 3jue_A 206 ASGHPPSLPTMADALAHGADVNWVNG-----GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGH 280 (368)
T ss_dssp HTSSSCCHHHHHHHHHTTCCTTCCCT-----TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHccCCHHHHHHHHHcCCCCCcccc-----ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCc
Confidence 3445 788899999999999987762 1234459999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 283 (290)
.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 281 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 281 TGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999988753
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.84 E-value=1e-21 Score=169.81 Aligned_cols=132 Identities=17% Similarity=0.132 Sum_probs=111.4
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCC-------CccccccchHHHHHHHcCCHHHHHHHHH---CCCCCcccccCC
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKP-------RMEYEVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQG 225 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~-------~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~---~g~~vn~~d~~g 225 (290)
.......+..+++++|++.|++++..+..+ ......|.||||+|+..|+.+++++||+ +|+++|.+|..|
T Consensus 105 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g 184 (273)
T 2pnn_A 105 LHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVG 184 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCC
Confidence 333455677889999999999998877521 1111246679999999999999999999 999999999999
Q ss_pred CcHHHHHHHcCC---------HHHHHHHHHCCCCCC-------CCCCCCCChhhhhhccCCHHHHHHHHhCCC-CCCCC
Q 022927 226 MSLLHLAALFNR---------TDIAFILMESGANMD-------CKNAQGESPLDCAPVTLQYKMRQKMEEDKN-NVGST 287 (290)
Q Consensus 226 ~TpLh~A~~~g~---------~~iv~~Ll~~Ga~in-------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA-din~~ 287 (290)
+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|| |+...
T Consensus 185 ~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 185 NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-----
T ss_pred CcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhh
Confidence 999999999998 899999999999997 489999999999999999999999999999 66543
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=4.8e-21 Score=167.22 Aligned_cols=124 Identities=23% Similarity=0.236 Sum_probs=110.6
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
....+..+.+++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 47 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~ 119 (299)
T 1s70_B 47 ACSSGDTEEVLRLLERGADINYANVDGLT-------ALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119 (299)
T ss_dssp HHHHTCHHHHHHHHHHCCCTTCBCTTCCB-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 35667888999999999998887766554 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCC------------------------------------------------------------CC
Q 022927 239 DIAFILMESGANMDCKNA------------------------------------------------------------QG 258 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~------------------------------------------------------------~G 258 (290)
+++++|+++|++++..|. .|
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 199 (299)
T 1s70_B 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG 199 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTC
T ss_pred HHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCC
Confidence 999999999999987764 46
Q ss_pred CChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 259 ESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 259 ~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.||||+|+..|+.+++++|+++|+++|.+|.
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 200 GTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 6777888888999999999999999998864
No 72
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=5.7e-21 Score=160.81 Aligned_cols=126 Identities=15% Similarity=0.117 Sum_probs=108.5
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCccccc-------------C
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK-------------Q 224 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~-------------~ 224 (290)
.....+..+++++|++.|++....... .....|.||||+|+..|+.+++++|+++|++++..+. .
T Consensus 43 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 120 (232)
T 2rfa_A 43 IAALYDNLEAAMVLMEAAPELVFEPMT--SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYY 120 (232)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCCCC--STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCC
T ss_pred HHHHcCCHHHHHHHHHcCchhcccccc--ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccC
Confidence 334567788999999999876322211 1122455699999999999999999999999998865 7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHH----HHHHhCCCCCC
Q 022927 225 GMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMR----QKMEEDKNNVG 285 (290)
Q Consensus 225 g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv----~~Ll~~GAdin 285 (290)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++++
T Consensus 121 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 99999999999999999999999999999999999999999999999988 99999999884
No 73
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=5.8e-21 Score=169.69 Aligned_cols=131 Identities=17% Similarity=0.171 Sum_probs=116.9
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCcc-----------------------------------------------ccc
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRME-----------------------------------------------YEV 191 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~-----------------------------------------------~~~ 191 (290)
....+..+++++|++.|++++..+..+.+. ...
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 345667788999999999888766554332 245
Q ss_pred cchHHHHHHHc---CCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhcc
Q 022927 192 NGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVT 268 (290)
Q Consensus 192 ~~t~Lh~A~~~---g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~ 268 (290)
+.||||+|+.. +..+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 67899999999 558999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCC
Q 022927 269 LQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 269 g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+.+++++|+++|||++..|.
T Consensus 291 ~~~~~v~~Ll~~gad~~~~~~ 311 (351)
T 3utm_A 291 GHLQTCRLLLSYGSDPSIISL 311 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CcHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999998874
No 74
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=99.84 E-value=1.2e-21 Score=139.46 Aligned_cols=61 Identities=21% Similarity=0.410 Sum_probs=56.8
Q ss_pred cccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhccc
Q 022927 3 HHDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 64 (290)
Q Consensus 3 ~~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 64 (290)
|....||.|+.+|++|+||||||.||+|||+.|+.+++++|.++ .+++|||+.||..+...
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g-~~~~RVC~~C~~~l~~~ 67 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAG-NTQQKVCKQCHTILTRG 67 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTT-SEEEEECHHHHHHHHHC
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccC-CCcCEECHHHHHHHHhc
Confidence 56678999999999999999999999999999999999999988 68999999999999754
No 75
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=3.4e-22 Score=163.90 Aligned_cols=117 Identities=14% Similarity=0.079 Sum_probs=105.5
Q ss_pred cccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCC------HHHHHHHHHCCCCCcccccCCC-cHHHHHHHcC--
Q 022927 166 SNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGD------AAAVKKLLSEGVDANFCDKQGM-SLLHLAALFN-- 236 (290)
Q Consensus 166 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~------~~~v~~Ll~~g~~vn~~d~~g~-TpLh~A~~~g-- 236 (290)
+++++|++.|++++..+..+.+ |||+|+..++ .+++++||++|+++|.+|..|+ ||||+|+..+
T Consensus 56 ~iv~~Ll~~Gadvn~~d~~g~T-------pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 56 KISMFLINKGADIKSRTKEGTT-------LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCC-------THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred HHHHHHHHCCCCCCCCCCCCCc-------HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCC
Confidence 4789999999999998877666 8999999987 6889999999999999999999 9999999854
Q ss_pred ---CHHHHHHHHH-CCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 237 ---RTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 237 ---~~~iv~~Ll~-~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|+++..+.+.++.
T Consensus 129 ~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 129 ENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred hhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 4569999999 9999999999999999999999999999999998777776653
No 76
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.9e-21 Score=171.32 Aligned_cols=126 Identities=21% Similarity=0.195 Sum_probs=109.2
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHc---CCHHHHHHHHHCCCCCcccccCCCcHHHHHHHc
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKN---GDAAAVKKLLSEGVDANFCDKQGMSLLHLAALF 235 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~---g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~ 235 (290)
....++...++.|+..|.+++...... .....|.||||+|+.. |+.+++++||++|+++|.+|..|+||||+|+..
T Consensus 158 A~~~g~~~~v~~ll~~g~d~~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~ 236 (301)
T 2b0o_E 158 AICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY 236 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSCEECS-SSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHT
T ss_pred hhhccCHHHHHHHHhcCCcccccCCCc-ccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence 345666777888899998887631110 0123456799999997 899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCC
Q 022927 236 NRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 285 (290)
Q Consensus 236 g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin 285 (290)
|+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|++.+
T Consensus 237 g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g 286 (301)
T 2b0o_E 237 NQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 286 (301)
T ss_dssp TCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999998754
No 77
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.84 E-value=1.1e-21 Score=169.63 Aligned_cols=125 Identities=18% Similarity=0.199 Sum_probs=107.2
Q ss_pred CCCCcccccccCCCCCCCCC----CCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCccccc--------------
Q 022927 162 STSNSNFSSIFNPGQVTNGA----TDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDK-------------- 223 (290)
Q Consensus 162 s~~~~~~~~Ll~~g~~~~~~----~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~-------------- 223 (290)
.+..+++++|++.|++.+.. +.........|.||||+|+..|+.+++++||++|++++..+.
T Consensus 67 ~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 146 (273)
T 2pnn_A 67 NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY 146 (273)
T ss_dssp TTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCC
T ss_pred cCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccccccc
Confidence 47788999999988653221 111111123566799999999999999999999999999987
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCChhhhhhccCC---------HHHHHHHHhCCCCCCC
Q 022927 224 QGMSLLHLAALFNRTDIAFILME---SGANMDCKNAQGESPLDCAPVTLQ---------YKMRQKMEEDKNNVGS 286 (290)
Q Consensus 224 ~g~TpLh~A~~~g~~~iv~~Ll~---~Ga~in~~d~~G~TpL~~A~~~g~---------~~iv~~Ll~~GAdin~ 286 (290)
.|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+++|+++|.
T Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 147 FGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp SCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 79999999999999999999999 999999999999999999999888 8999999999999874
No 78
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=2.7e-21 Score=147.23 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=95.8
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+.+++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 15 ~~~~~~~~v~~ll~~~~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 15 LKNGDLDEVKDYVAKGEDVNRTLEGGRK-------PLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS 87 (123)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSCCTTSSC-------HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHcCCCcCccCCCCCc-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 4456778889999999998887766555 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHH
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKM 273 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~i 273 (290)
++++|+++|++++.+|..|+||||+|...+..++
T Consensus 88 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 88 CVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 9999999999999999999999999965444433
No 79
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=1e-20 Score=141.47 Aligned_cols=87 Identities=25% Similarity=0.395 Sum_probs=84.3
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCC
Q 022927 191 VNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ 270 (290)
Q Consensus 191 ~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~ 270 (290)
.++|+||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 022927 271 YKMRQKM 277 (290)
Q Consensus 271 ~~iv~~L 277 (290)
.+++++|
T Consensus 103 ~~~~~~L 109 (110)
T 2zgd_A 103 EDLAEIL 109 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=1.4e-20 Score=167.20 Aligned_cols=122 Identities=16% Similarity=0.194 Sum_probs=109.4
Q ss_pred CCCCCCcccccccC-CCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 160 RGSTSNSNFSSIFN-PGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
+..++.+.++.|+. .+.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 32 ~~~g~~~~v~~ll~~~~~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 104 (351)
T 3utm_A 32 ARSGNEEKLMALLTPLNVNCHASDGRKST-------PLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHY 104 (351)
T ss_dssp HHHTCHHHHHHHCCTTTTTCCCSSTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHcCCHHHHHHHHHhcCCCcccCCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCH
Confidence 34455666655554 47777777666555 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 239 DIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 105 ~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 105 EVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 99999999999999999999999999999999999999999999998765
No 81
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=1.4e-20 Score=154.81 Aligned_cols=123 Identities=17% Similarity=0.192 Sum_probs=110.0
Q ss_pred CCCCCCcccccccCCCC-CCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCH
Q 022927 160 RGSTSNSNFSSIFNPGQ-VTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRT 238 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~ 238 (290)
+..++.+.++.|+..+. +++..+..+. ||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.
T Consensus 13 ~~~g~~~~v~~ll~~~~~~~~~~~~~g~-------t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 85 (201)
T 3hra_A 13 ANQRDTKKVKEILQDTTYQVDEVDTEGN-------TPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRT 85 (201)
T ss_dssp HHTTCHHHHHHHHTCTTCCTTCCCTTSC-------CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHhccHHHHHHHHHcCCCCCCCCCCCCC-------CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 44566677777777665 7777666554 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC-CCCCCCCC
Q 022927 239 DIAFILM-ESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK-NNVGSTTS 289 (290)
Q Consensus 239 ~iv~~Ll-~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-Adin~~~~ 289 (290)
+++++|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++..|.
T Consensus 86 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 86 EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred HHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 9999999 668899999999999999999999999999999999 99998764
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.84 E-value=5.1e-21 Score=170.33 Aligned_cols=111 Identities=19% Similarity=0.219 Sum_probs=96.0
Q ss_pred cccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHC-CCCCcccccCCCcHHHHHHHcCCHHHHHHH
Q 022927 166 SNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSE-GVDANFCDKQGMSLLHLAALFNRTDIAFIL 244 (290)
Q Consensus 166 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~L 244 (290)
.++++|++.|++++..+..+. ||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+.+++++|
T Consensus 220 ~i~~lLl~~gad~n~~d~~g~-------t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 220 AITHLLLDHGADVNVRGERGK-------TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp HHHHHHHHTTCCTTCCCGGGC-------CHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCC-------CHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 456788899998887765544 599999999999999999985 899999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 245 MESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 245 l~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
|++||++|.+ +|||+|+..|+.++|++||++|||+|...
T Consensus 293 l~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 293 CKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp HTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC----
T ss_pred HHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 9999999864 59999999999999999999999998753
No 83
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=167.50 Aligned_cols=123 Identities=18% Similarity=0.200 Sum_probs=82.0
Q ss_pred CCCCCCCcccccccCCCC-CCCCCCCCCCccc-------------------------------cccchHHHHHHHcCCHH
Q 022927 159 SRGSTSNSNFSSIFNPGQ-VTNGATDKPRMEY-------------------------------EVNGEGLRDAIKNGDAA 206 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~-~~~~~~~~~~~~~-------------------------------~~~~t~Lh~A~~~g~~~ 206 (290)
....+..+++++|++.|+ +++..+..+.++. ..|.||||+|+..|+.+
T Consensus 118 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~ 197 (276)
T 4hbd_A 118 SVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVD 197 (276)
T ss_dssp HHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 345667778888888887 7777666554421 12556666666666666
Q ss_pred HHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC
Q 022927 207 AVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILME-SGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 207 ~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 281 (290)
++++||++|+++|.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 198 ~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 198 VVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 6666666666666666666666666666666666666666 56666666666666666666666666666666653
No 84
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=1.4e-20 Score=159.11 Aligned_cols=130 Identities=16% Similarity=0.127 Sum_probs=74.1
Q ss_pred CCCCCCCcccccccCCCC----CCCCCCCCCCccc--------------------------cccchHHHHHHHcCCHHHH
Q 022927 159 SRGSTSNSNFSSIFNPGQ----VTNGATDKPRMEY--------------------------EVNGEGLRDAIKNGDAAAV 208 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~----~~~~~~~~~~~~~--------------------------~~~~t~Lh~A~~~g~~~~v 208 (290)
....+..+.++.|++.+. +++..+..+.++. ..|.||||+|+..|+.+++
T Consensus 15 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 94 (236)
T 1ikn_D 15 AIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASV 94 (236)
T ss_dssp HHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 345567778888887765 4555555443311 1234455555555555555
Q ss_pred HHHHHCCCC------CcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCChhhhhhccCCHHHHHHHHhCC
Q 022927 209 KKLLSEGVD------ANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNA-QGESPLDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 209 ~~Ll~~g~~------vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~G 281 (290)
++|++.|++ ++..|..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|
T Consensus 95 ~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 95 GVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp HHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 555555443 234444556666666666666666666666666666665 6666666666666666666666666
Q ss_pred CCCCCCC
Q 022927 282 NNVGSTT 288 (290)
Q Consensus 282 Adin~~~ 288 (290)
|+++..|
T Consensus 175 a~~~~~~ 181 (236)
T 1ikn_D 175 ADVNRVT 181 (236)
T ss_dssp CCSCCCC
T ss_pred CCCCccc
Confidence 6666554
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=9.7e-21 Score=168.45 Aligned_cols=117 Identities=14% Similarity=0.053 Sum_probs=93.6
Q ss_pred cccccccCCCCCCCC-CCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcC--------
Q 022927 166 SNFSSIFNPGQVTNG-ATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFN-------- 236 (290)
Q Consensus 166 ~~~~~Ll~~g~~~~~-~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g-------- 236 (290)
.++++|++.|++++. .+..+.+ |||+|+..|+.++|++||++|+++|.+|..|+||||+|+..|
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~T-------pLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~ 183 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNT-------PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF 183 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCH
T ss_pred HHHHHHHhcCCCcccccCCCCCc-------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHH
Confidence 455777888888887 5665554 888888888888888888888888888877888877777654
Q ss_pred ---------------------------------CHHHHHHHHHCCC----------------------------------
Q 022927 237 ---------------------------------RTDIAFILMESGA---------------------------------- 249 (290)
Q Consensus 237 ---------------------------------~~~iv~~Ll~~Ga---------------------------------- 249 (290)
+.+++++|++.++
T Consensus 184 ~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~ 263 (327)
T 1sw6_A 184 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred HHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhH
Confidence 4455566665532
Q ss_pred -----------CCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 250 -----------NMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 250 -----------~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++|.+|..|+||||+|+..|+.+++++|+++|||++++|.
T Consensus 264 ~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 264 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp HHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 5788899999999999999999999999999999999874
No 86
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.84 E-value=1.2e-20 Score=158.18 Aligned_cols=127 Identities=20% Similarity=0.144 Sum_probs=110.6
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCC--CCCcccccCCCcHHHHHHHcC
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEG--VDANFCDKQGMSLLHLAALFN 236 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g--~~vn~~d~~g~TpLh~A~~~g 236 (290)
....+..+++++|++.|.+.+.... ....|.||||+|+..|+.+++++|+++| ++++..|..|+||||+|+..|
T Consensus 43 A~~~~~~~~v~~Ll~~~~~~~~~~~----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~ 118 (228)
T 2dzn_A 43 SVSFQAHEITSFLLSKMENVNLDDY----PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK 118 (228)
T ss_dssp HHHTTCHHHHHHHHHTCTTCCGGGC----CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHhcccccccccc----CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcC
Confidence 3456677889999999954433220 1123456999999999999999999998 899999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCC-CCCCCCCC
Q 022927 237 RTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDK-NNVGSTTS 289 (290)
Q Consensus 237 ~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-Adin~~~~ 289 (290)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 119 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 119 WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred CHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 999999999999999999999999999999999999999999999 99998764
No 87
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=164.65 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=105.6
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES--------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC--------TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC--------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 34456677788888877765432 2456999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++. |..|+||||+|+..|+.+++++|+++|+|++.+|.
T Consensus 205 ~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 253 (285)
T 3d9h_A 205 CVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNA 253 (285)
T ss_dssp HHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 99999999999995 88999999999999999999999999999998874
No 88
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=1.7e-20 Score=158.33 Aligned_cols=124 Identities=17% Similarity=0.256 Sum_probs=109.0
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCC-CCCcccccCCCcHHHHHHHcCC
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEG-VDANFCDKQGMSLLHLAALFNR 237 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g-~~vn~~d~~g~TpLh~A~~~g~ 237 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|++.| .+++..|..|+||||+|+..++
T Consensus 51 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 123 (237)
T 3b7b_A 51 AAENNHLEAVKYLIKAGALVDPKDAEGST-------CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCCCCCTTSCC-------HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHhCCHHHHHHHHhCCCCCCCCCCCCCc-------HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Confidence 34456778889999999888777665554 899999999999999999998 8899999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|.
T Consensus 124 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI 175 (237)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCT
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999988764
No 89
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.6e-21 Score=167.21 Aligned_cols=127 Identities=17% Similarity=0.091 Sum_probs=110.7
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCC-------CCccccccchHHHHHHHcCCHHHHHHHHH---CCCCCcccccCCCc
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDK-------PRMEYEVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQGMS 227 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~-------~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~---~g~~vn~~d~~g~T 227 (290)
.....+..+++++|++.|++++..+.. .......|.||||+|+..|+.+++++||+ +|+++|.+|..|+|
T Consensus 99 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~T 178 (260)
T 3jxi_A 99 IAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNT 178 (260)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCc
Confidence 335567788999999999999887731 01111246679999999999999999999 99999999999999
Q ss_pred HHHHHHHcCC---------HHHHHHHHHCCCCC-------CCCCCCCCChhhhhhccCCHHHHHHHHhCCCCC
Q 022927 228 LLHLAALFNR---------TDIAFILMESGANM-------DCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 284 (290)
Q Consensus 228 pLh~A~~~g~---------~~iv~~Ll~~Ga~i-------n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdi 284 (290)
|||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 179 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999888 79999999999999 679999999999999999999999999998764
No 90
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=99.83 E-value=5.8e-22 Score=140.38 Aligned_cols=61 Identities=26% Similarity=0.526 Sum_probs=56.5
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhccc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 64 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 64 (290)
...+|+.|+++|++|+||||||.||+|||+.||.++..+|..++.+++|||+.||..+...
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 80 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSS 80 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTS
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhc
Confidence 4568999999999999999999999999999999999999988789999999999998643
No 91
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=1.3e-21 Score=176.00 Aligned_cols=119 Identities=17% Similarity=0.218 Sum_probs=110.1
Q ss_pred CCCC--CCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCC-----CcccccCCCcHHHHH
Q 022927 160 RGST--SNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVD-----ANFCDKQGMSLLHLA 232 (290)
Q Consensus 160 ~~s~--~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~-----vn~~d~~g~TpLh~A 232 (290)
...+ ..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++ +|..|..|+||||+|
T Consensus 146 ~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A 218 (364)
T 3ljn_A 146 VGLGPEYLEMIKILVQLGASPTAKDKADET-------PLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWA 218 (364)
T ss_dssp HHSCGGGHHHHHHHHHHTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHH
T ss_pred HHcCCchHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHH
Confidence 3445 678899999999999888766555 99999999999999999999998 999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCC
Q 022927 233 ALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVG 285 (290)
Q Consensus 233 ~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin 285 (290)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 219 ~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 219 ILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp HTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 99999999999999999999999999999999999999999999999998763
No 92
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.83 E-value=1.8e-21 Score=166.61 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=112.2
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCCCcc------ccccchHHHHHHHcCCHHHHHHHHH---CCCCCcccccCCC
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRME------YEVNGEGLRDAIKNGDAAAVKKLLS---EGVDANFCDKQGM 226 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~------~~~~~t~Lh~A~~~g~~~~v~~Ll~---~g~~vn~~d~~g~ 226 (290)
.......+..+++++|++.|++++..+...... ...|.||||+|+..|+.+++++|++ +|+++|.+|..|+
T Consensus 94 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~ 173 (256)
T 2etb_A 94 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN 173 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCC
Confidence 333455677889999999999998877641111 1126679999999999999999999 9999999999999
Q ss_pred cHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CCCCCCCCChhhhhhccCCHHHHHHHHhCCCCC
Q 022927 227 SLLHLAAL--FNRTD-------IAFILMESGANM-------DCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNV 284 (290)
Q Consensus 227 TpLh~A~~--~g~~~-------iv~~Ll~~Ga~i-------n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdi 284 (290)
||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 174 TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 174 TVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99999999 78888 999999999999 999999999999999999999999999998753
No 93
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=99.83 E-value=3.8e-22 Score=137.49 Aligned_cols=58 Identities=36% Similarity=0.728 Sum_probs=54.4
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..+|+.|+++|++++||||||.||+|||+.|+.+++++|.+|..+++|||+.||..+.
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 68 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYE 68 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHH
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHH
Confidence 3579999999999999999999999999999999999999987789999999999875
No 94
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=2.5e-20 Score=157.34 Aligned_cols=124 Identities=20% Similarity=0.231 Sum_probs=110.9
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCC----CCcccccCCCcHHHHHHH
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGV----DANFCDKQGMSLLHLAAL 234 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~----~vn~~d~~g~TpLh~A~~ 234 (290)
....+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|++.+. +++..|..|+||||+|+.
T Consensus 53 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~ 125 (241)
T 1k1a_A 53 AVITTLPSVVRLLVTAGASPMALDRHGQT-------AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH
Confidence 34566778889999999998877665554 8999999999999999999987 888899999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCC-CCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 235 FNRTDIAFILMESGANMDCKN-AQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 235 ~g~~~iv~~Ll~~Ga~in~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 126 ~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred cCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999998 7899999999999999999999999999998764
No 95
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.9e-20 Score=163.32 Aligned_cols=121 Identities=18% Similarity=0.152 Sum_probs=82.9
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
+..+..+++++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 67 a~~g~~~~v~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~ 139 (285)
T 3d9h_A 67 AIHGHQLSLRNLISQGWAVNIITADHVS-------PLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 139 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCSCEECTTCCC-------HHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCC-------HHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHH
Confidence 4456667777777777777666555444 777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTT 288 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~ 288 (290)
++++|+++|++++..+ .|+||||+|+..|+.+++++|+++|++++..|
T Consensus 140 ~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d 187 (285)
T 3d9h_A 140 CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKI 187 (285)
T ss_dssp HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCB
T ss_pred HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 7777777766666433 36666666666666666666666666666554
No 96
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=2.7e-20 Score=160.44 Aligned_cols=121 Identities=18% Similarity=0.183 Sum_probs=111.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHH
Q 022927 161 GSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDI 240 (290)
Q Consensus 161 ~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~i 240 (290)
..++.+.+++|++.|.+++..... .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++
T Consensus 14 ~~g~~~~v~~Ll~~g~~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (285)
T 1wdy_A 14 QNEDVDLVQQLLEGGANVNFQEEE------GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKL 87 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTT------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HcCCHHHHHHHHHcCCCcccccCC------CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 456678889999999988776322 34459999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCC
Q 022927 241 AFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGST 287 (290)
Q Consensus 241 v~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~ 287 (290)
+++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 88 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 88 LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp HHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 99999999999999999999999999999999999999999999876
No 97
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=4.2e-21 Score=172.63 Aligned_cols=132 Identities=17% Similarity=0.145 Sum_probs=111.8
Q ss_pred cCCCCCCCcccccccCC----CCCCCCCCC----------CCCccccccchHHHHHHHcC--CHHHHHHHHHCCCCCccc
Q 022927 158 RSRGSTSNSNFSSIFNP----GQVTNGATD----------KPRMEYEVNGEGLRDAIKNG--DAAAVKKLLSEGVDANFC 221 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~----g~~~~~~~~----------~~~~~~~~~~t~Lh~A~~~g--~~~~v~~Ll~~g~~vn~~ 221 (290)
.....+..+++++|++. |.+++.... ........|.||||+|+..| +.+++++|+++|++++..
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 33456677788888887 555443000 00112234667999999999 999999999999999999
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 222 DKQGMSLLHLAALFNRTDIAFILMESGAN-----MDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 222 d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~-----in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|||+|..|.
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999999 999999999999999999999999999999999998874
No 98
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=1.3e-20 Score=163.60 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=93.8
Q ss_pred ccchHHHHHH-----HcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhh
Q 022927 191 VNGEGLRDAI-----KNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCA 265 (290)
Q Consensus 191 ~~~t~Lh~A~-----~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A 265 (290)
.|.||||+|+ ..++.+++++|++.|.+++..|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus 144 ~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 144 AGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223 (276)
T ss_dssp TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 0578999999 66899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCHHHHHHHHh-CCCCCCCCCC
Q 022927 266 PVTLQYKMRQKMEE-DKNNVGSTTS 289 (290)
Q Consensus 266 ~~~g~~~iv~~Ll~-~GAdin~~~~ 289 (290)
+..|+.+++++|++ +|+|++.+|.
T Consensus 224 ~~~g~~~iv~~Ll~~~gad~~~~d~ 248 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCDISLTDR 248 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred HHCCCHHHHHHHHhcCCCCCcCcCC
Confidence 99999999999999 8999998874
No 99
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=3.2e-20 Score=165.16 Aligned_cols=123 Identities=18% Similarity=0.181 Sum_probs=109.4
Q ss_pred CCCCCCcccccccC-CCCCCCCCCCCCCccccccchHHHHHHHcCC----HHHHHHHHHCCCCCcccccCCCcHHHHHHH
Q 022927 160 RGSTSNSNFSSIFN-PGQVTNGATDKPRMEYEVNGEGLRDAIKNGD----AAAVKKLLSEGVDANFCDKQGMSLLHLAAL 234 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~----~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~ 234 (290)
...+..+++++|++ .|++++..+..+.+ +||+++..+. ..++++|+++|+++|.+|..|+||||+|+.
T Consensus 176 ~~~g~~~~v~~LL~~~gad~n~~d~~g~t-------~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 176 AEKGHVEVLKILLDEMGADVNACDNMGRN-------ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 248 (337)
T ss_dssp HHHTCHHHHHHHHHHSCCCTTCCCTTSCC-------HHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred HHCCCHHHHHHHHhccCCCcCccCCCCCc-------HHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 44567788899985 69999888776665 8888776654 358899999999999999999999999999
Q ss_pred cCCHHHHHHHHHC-CCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 235 FNRTDIAFILMES-GANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 235 ~g~~~iv~~Ll~~-Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.|+.+++++|++. |+++|.+|.+|+||||+|+..|+.++|++||++|||+|..|.
T Consensus 249 ~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~ 304 (337)
T 4g8k_A 249 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 304 (337)
T ss_dssp TTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCH
T ss_pred hhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCH
Confidence 9999999999986 899999999999999999999999999999999999998763
No 100
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=8.8e-21 Score=165.46 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=80.6
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|++++..+ |.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 39 ~~~g~~~~v~~Ll~~g~~~~~~~---------g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~ 109 (285)
T 3kea_A 39 IADNNVRLVCTLLNAGALKNLLE---------NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQ 109 (285)
T ss_dssp HHTTCHHHHHHHHHTTGGGSCCT---------TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHhCCCCCCCCC---------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 34555666677777776665542 334777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHCCCCCCCCCCCC-CChhhhhhccCCHHHHHHHHhCCCCC
Q 022927 240 IAFILMESGANMDCKNAQG-ESPLDCAPVTLQYKMRQKMEEDKNNV 284 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G-~TpL~~A~~~g~~~iv~~Ll~~GAdi 284 (290)
++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|+++
T Consensus 110 ~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 110 TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 7777777777777777776 57777777777777777777776665
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=4.2e-20 Score=150.49 Aligned_cols=114 Identities=21% Similarity=0.328 Sum_probs=101.0
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccc-cCCCcHHHHHHHcCC
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAALFNR 237 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d-~~g~TpLh~A~~~g~ 237 (290)
....+..+.++.|++ |.+++..+..+.+ |||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..|+
T Consensus 51 A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t-------~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 51 AARKADEQALSQLLE-DRDVDAVDENGRT-------ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHTTCHHHHHHHTT-TSCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHh-cCCCCCcCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 345667788899999 8888887766555 9999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhcc----------------CCHHHHHHHHhC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVT----------------LQYKMRQKMEED 280 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~----------------g~~~iv~~Ll~~ 280 (290)
.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|.++
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999999999999765 567777777654
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.81 E-value=3.2e-20 Score=158.35 Aligned_cols=118 Identities=20% Similarity=0.305 Sum_probs=106.2
Q ss_pred cCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccc-cCCCcHHHHHHHcC
Q 022927 158 RSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAALFN 236 (290)
Q Consensus 158 ~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d-~~g~TpLh~A~~~g 236 (290)
.....+..+.++.|++ |.+++..+..+.+ |||+|+..|+.++|++||++|+++|.+| ..|+||||+|+..|
T Consensus 51 ~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 51 TAARKADEQALSQLLE-DRDVDAVDENGRT-------ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHTTTCHHHHHHTTT-TCCTTCBCTTSCB-------HHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHc-CCCCCCcCCCCCC-------HHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 3456778888999999 8888887766554 9999999999999999999999999998 78999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCChhhhhh----------------ccCCHHHHHHHHhCCCC
Q 022927 237 RTDIAFILMESGANMDCKNAQGESPLDCAP----------------VTLQYKMRQKMEEDKNN 283 (290)
Q Consensus 237 ~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~----------------~~g~~~iv~~Ll~~GAd 283 (290)
+.+++++|+++|++++.+|..|+||||+|+ ..|+.+++++|++++.+
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999999999999999999997 56889999999986543
No 103
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=5.3e-20 Score=169.29 Aligned_cols=123 Identities=24% Similarity=0.292 Sum_probs=110.5
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+++++|++.|.+++..+..+. ||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 220 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~-------t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 292 (437)
T 1n11_A 220 AKQNQVEVARSLLQYGGSANAESVQGV-------TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP 292 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCC-------CHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCC-------CHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 345566777888888888777665554 4999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 240 IAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|.
T Consensus 293 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~ 342 (437)
T 1n11_A 293 VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342 (437)
T ss_dssp HHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998874
No 104
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.81 E-value=1.2e-20 Score=164.58 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=81.6
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCC----------
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQG---------- 225 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g---------- 225 (290)
.......+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|
T Consensus 66 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 66 LHQAATLEDTKIVKILLFSGLDDSQFDDKGNT-------ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp HHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCc-------HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Confidence 33445566777888888888888776665554 6777777677677776666666666666555
Q ss_pred -----------------------CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCh-hhhhhccCCHHHHHHHHhCC
Q 022927 226 -----------------------MSLLHLAALFNRTDIAFILMESGANMDCKNAQGESP-LDCAPVTLQYKMRQKMEEDK 281 (290)
Q Consensus 226 -----------------------~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~Tp-L~~A~~~g~~~iv~~Ll~~G 281 (290)
+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|+++|
T Consensus 139 ~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp TTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC
T ss_pred cCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Confidence 455555555555555555665666666666666665 66666666666666666666
Q ss_pred CCCCCCC
Q 022927 282 NNVGSTT 288 (290)
Q Consensus 282 Adin~~~ 288 (290)
||++..|
T Consensus 219 ad~~~~~ 225 (285)
T 3kea_A 219 INIYSAN 225 (285)
T ss_dssp BCSTTTT
T ss_pred CCCCCCC
Confidence 6666554
No 105
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=99.81 E-value=4.5e-21 Score=135.14 Aligned_cols=58 Identities=28% Similarity=0.607 Sum_probs=53.0
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
....|+.|+.+|++|+||||||.||+|||+.|+.+++++|.. .+++|||+.||..+..
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~--~~~~RVC~~C~~~l~~ 75 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSY--PKPVRVCDSCHTLLLQ 75 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTC--SSCEEECHHHHHHTTC
T ss_pred cCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCC--CCcCEECHHHHHHHHH
Confidence 346799999999999999999999999999999999999865 5999999999999864
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=151.55 Aligned_cols=124 Identities=15% Similarity=0.081 Sum_probs=101.3
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccc-cCCCcHHHHHHHcCC
Q 022927 159 SRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCD-KQGMSLLHLAALFNR 237 (290)
Q Consensus 159 ~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d-~~g~TpLh~A~~~g~ 237 (290)
....++.+.+++|++.|.+++..+..+.+ |||+|+..|+.+++++|+++|.+++..+ ..|+||||+|+..|+
T Consensus 16 A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t-------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 16 ATQYGIYERCRELVEAGYDVRQPDKENVT-------LLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred HHHcCChHHHHHHHHcCCCcCCCCCCCCC-------HHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 34566778888888888888776655544 8888888888888888888888877655 448888888888888
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 238 TDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 238 ~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 140 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCC
Confidence 8888888888888888888888888888888888888888888888877653
No 107
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=5.9e-20 Score=166.20 Aligned_cols=99 Identities=19% Similarity=0.240 Sum_probs=76.5
Q ss_pred ccchHHHHHHHcC---CHHHHHHHHHCCCCCcc--------cccCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCC
Q 022927 191 VNGEGLRDAIKNG---DAAAVKKLLSEGVDANF--------CDKQGMSLLHLAALFNRTDIAFILMESG-ANMDCKNAQG 258 (290)
Q Consensus 191 ~~~t~Lh~A~~~g---~~~~v~~Ll~~g~~vn~--------~d~~g~TpLh~A~~~g~~~iv~~Ll~~G-a~in~~d~~G 258 (290)
.|.||||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|+++| ++++.+|..|
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g 313 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC
Confidence 3456777777776 67777888887777775 4567788888888888888888888764 8888888888
Q ss_pred CChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 259 ESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 259 ~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+||||+|+..|+.+++++|+++||+++.+|.
T Consensus 314 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 8888888888888888888888888877663
No 108
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=99.80 E-value=7.6e-21 Score=136.21 Aligned_cols=61 Identities=21% Similarity=0.514 Sum_probs=54.5
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcccCC
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTGK 66 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~~ 66 (290)
...+|+.|+++|++++||||||.||+|||+.|+.++..+|..+ +++|||+.||..+.....
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~--~~~RVC~~C~~~l~~~~~ 79 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLE--KEARVCVVCYETISKAQA 79 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTT--EEEEECHHHHHHHHHHC-
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCC--CCCeECHHHHHHHHHHhh
Confidence 4567999999999999999999999999999999999988654 899999999999976644
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=2.3e-19 Score=162.03 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=94.2
Q ss_pred cchHHHHHHHc-CCHHHHHHHHHCCCCCcccc--cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhcc
Q 022927 192 NGEGLRDAIKN-GDAAAVKKLLSEGVDANFCD--KQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVT 268 (290)
Q Consensus 192 ~~t~Lh~A~~~-g~~~~v~~Ll~~g~~vn~~d--~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~ 268 (290)
+.|+||+|+.. |+++++++||++|+++|..| ..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 44699999999 99999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCC
Q 022927 269 LQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 269 g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+.+++++|+++||++++.|.
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CcHHHHHHHHHCcCCCCCcCC
Confidence 999999999999999998874
No 110
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=151.80 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=96.3
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCC-H
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNR-T 238 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~-~ 238 (290)
...+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++..|..|.||||+|+..++ .
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCS-------CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSS
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChH
Confidence 3445667778888888887776655444 7888888888888888888888888888888888888886655 6
Q ss_pred HHHHHHHHCCCCCCCCCC-CCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 239 DIAFILMESGANMDCKNA-QGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 239 ~iv~~Ll~~Ga~in~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 157 ~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 208 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208 (240)
T ss_dssp TTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCT
T ss_pred HHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 778888888888887776 788888888888888888888888888887653
No 111
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=4.8e-19 Score=160.21 Aligned_cols=123 Identities=17% Similarity=0.150 Sum_probs=112.5
Q ss_pred ccCCCCCCCccccccc--------CCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcH
Q 022927 157 ARSRGSTSNSNFSSIF--------NPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSL 228 (290)
Q Consensus 157 ~~~~~s~~~~~~~~Ll--------~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~Tp 228 (290)
...+..+..+.+++|+ +.|++++..+..+.+ |||+|+..|+.++|++|+++|++++..|..|.||
T Consensus 130 h~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~T-------pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT-------PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp HHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC-------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC-------HHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 3345667778888876 789999888766655 9999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCChhhhhhccC---CHHHHHHHHhCCCCCCC
Q 022927 229 LHLAALFNRTDIAFILMESG---ANMDCKNAQGESPLDCAPVTL---QYKMRQKMEEDKNNVGS 286 (290)
Q Consensus 229 Lh~A~~~g~~~iv~~Ll~~G---a~in~~d~~G~TpL~~A~~~g---~~~iv~~Ll~~GAdin~ 286 (290)
||+|+..|+.+++++|+++| ++++..|..|+||||+|+..+ +.+++++|+++|++++.
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence 99999999999999999998 899999999999999999988 89999999999999986
No 112
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=99.78 E-value=3.8e-20 Score=140.70 Aligned_cols=57 Identities=30% Similarity=0.579 Sum_probs=52.1
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
....|+.|+.+|++|+||||||.||+|||+.||.+++++|.. .+++|||+.||..++
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~--~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSS--KKPVRVCDACFNDLQ 124 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTTC--SSCEEECHHHHHHTT
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCCccccCCC--CCCCEeCHHHHHHhc
Confidence 356799999999999999999999999999999999988864 599999999999874
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=8.5e-19 Score=164.57 Aligned_cols=96 Identities=23% Similarity=0.275 Sum_probs=92.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCccc------ccCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCCChhhh
Q 022927 194 EGLRDAIKNGDAAAVKKLLSEGVDANFC------DKQGMSLLHLAAL---FNRTDIAFILMESGANMDCKNAQGESPLDC 264 (290)
Q Consensus 194 t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~------d~~g~TpLh~A~~---~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~ 264 (290)
+.||.|+..|+.++++.||+.|+++|.. |..|+||||+|+. .|+.+++++||++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4799999999999999999999999988 8899999999976 899999999999999999999999999999
Q ss_pred hhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 265 APVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 265 A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+..|+.+++++||++|||+|++|.
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~ 238 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNE 238 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999875
No 114
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=9.7e-19 Score=153.93 Aligned_cols=96 Identities=23% Similarity=0.297 Sum_probs=92.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCcc------cccCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCChhhh
Q 022927 194 EGLRDAIKNGDAAAVKKLLSEGVDANF------CDKQGMSLLHLAALF---NRTDIAFILMESGANMDCKNAQGESPLDC 264 (290)
Q Consensus 194 t~Lh~A~~~g~~~~v~~Ll~~g~~vn~------~d~~g~TpLh~A~~~---g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~ 264 (290)
++|++|+..|+.+.++.|++.|++++. .|..|+||||+|+.. ++.+++++||++|+++|.+|..|+||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 479999999999999999999999998 689999999999997 89999999999999999999999999999
Q ss_pred hhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 265 APVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 265 A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+..|+.+++++|+++|||++++|.
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~ 257 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNE 257 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999874
No 115
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=2.2e-18 Score=149.99 Aligned_cols=96 Identities=20% Similarity=0.257 Sum_probs=90.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCc------ccccCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCChhhh
Q 022927 194 EGLRDAIKNGDAAAVKKLLSEGVDAN------FCDKQGMSLLHLAALF---NRTDIAFILMESGANMDCKNAQGESPLDC 264 (290)
Q Consensus 194 t~Lh~A~~~g~~~~v~~Ll~~g~~vn------~~d~~g~TpLh~A~~~---g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~ 264 (290)
++|+.|+..|+.+.++.+++.|++++ ..|..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 47999999999999999999999954 4578999999999999 89999999999999999999999999999
Q ss_pred hhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 265 APVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 265 A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
|+..|+.+++++|+++|||++.+|.
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~~d~ 236 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEIANE 236 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCccC
Confidence 9999999999999999999999874
No 116
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=99.75 E-value=1.5e-19 Score=152.02 Aligned_cols=61 Identities=34% Similarity=0.709 Sum_probs=55.6
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcccC
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTG 65 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~ 65 (290)
..+|+.|+++|++++||||||.||+|||+.||.++..+|.++..+++|||+.||..++...
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~~~~ 224 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKA 224 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHCC--
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhhhhc
Confidence 3579999999999999999999999999999999999999887899999999999997543
No 117
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=99.74 E-value=2.2e-19 Score=150.65 Aligned_cols=59 Identities=34% Similarity=0.714 Sum_probs=55.2
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
...|+.|+++|++++||||||.||+|||+.||.++.++|.+|..+++|||+.||..+..
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~l~~ 219 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQR 219 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHHHhc
Confidence 46899999999999999999999999999999999999998888999999999998853
No 118
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.69 E-value=4.9e-18 Score=150.91 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=100.6
Q ss_pred CCCcccccccCCCCCCCCCCCCCCccccc---------------cchHH-----------------------HHHHHcCC
Q 022927 163 TSNSNFSSIFNPGQVTNGATDKPRMEYEV---------------NGEGL-----------------------RDAIKNGD 204 (290)
Q Consensus 163 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~---------------~~t~L-----------------------h~A~~~g~ 204 (290)
...+.+++|++.|++++..+..+.+.... +.+++ |+|+..+.
T Consensus 30 ~~~dlv~~ll~~ga~i~~~~~~g~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 109 (327)
T 1sw6_A 30 FTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLL 109 (327)
T ss_dssp CCTTCCCSTTTSSCCCEECBCCCCCCCHHHHHHHHHHHHHHHC-------------------------------CHHHHH
T ss_pred hcCchHHHHhhCCcccccCCCCCCcccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhH
Confidence 34567888888888888777666554321 12222 44555566
Q ss_pred HHHHHHHHHCCCCCcc-cccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCC---HHHHHHHHhC
Q 022927 205 AAAVKKLLSEGVDANF-CDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQ---YKMRQKMEED 280 (290)
Q Consensus 205 ~~~v~~Ll~~g~~vn~-~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~---~~iv~~Ll~~ 280 (290)
.+++++|++.|+++|. +|..|+||||+|+..|+.+++++||++|++++.+|..|+||||+|+..|+ .++++.|+++
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 6788889999999999 89999999999999999999999999999999999999999999999998 6888888887
Q ss_pred C-CCCCCCCC
Q 022927 281 K-NNVGSTTS 289 (290)
Q Consensus 281 G-Adin~~~~ 289 (290)
+ ++++..|.
T Consensus 190 ~~~~~~~~d~ 199 (327)
T 1sw6_A 190 LYPCLILEDS 199 (327)
T ss_dssp HGGGGGEECT
T ss_pred hhccccCCCC
Confidence 6 67776653
No 119
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=99.69 E-value=2.9e-18 Score=128.14 Aligned_cols=52 Identities=17% Similarity=0.298 Sum_probs=43.5
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
....|+.|+.+|++++||||||.||+|||+.||.++++ ++|||+.||..+..
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~--------~vRVC~~C~~~~~~ 69 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN--------GPRLCLLCQRFRAT 69 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC------------CCEEHHHHHHHHT
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC--------CceECHHHHHHHhc
Confidence 45679999999999999999999999999999998864 49999999998753
No 120
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=3.9e-18 Score=154.49 Aligned_cols=122 Identities=11% Similarity=-0.035 Sum_probs=97.0
Q ss_pred cccCCCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCC---cccccCCCcHHHHH
Q 022927 156 TARSRGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDA---NFCDKQGMSLLHLA 232 (290)
Q Consensus 156 ~~~~~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~v---n~~d~~g~TpLh~A 232 (290)
....+..+..+++++|++.|+.....+. ....+.||||+|+..|+.++|++|+++|+++ +..+.+ +||||+|
T Consensus 96 Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~----~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 96 CFVAAITGCSSALDTLCLLLTSDEIVKV----IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHCCHHHHHHHTTC--CCSSCC------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCcHHHHHH----hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 3344567788899999999873322111 1124567999999999999999999999863 333333 8999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCC--CCCCCCChhhhhh-ccCCHHHHHHHHhCCC
Q 022927 233 ALFNRTDIAFILMESGANMDC--KNAQGESPLDCAP-VTLQYKMRQKMEEDKN 282 (290)
Q Consensus 233 ~~~g~~~iv~~Ll~~Ga~in~--~d~~G~TpL~~A~-~~g~~~iv~~Ll~~GA 282 (290)
+..|+.+++++|+++|++++. .|..|+||||+|+ ..|+.+++++|+++|+
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 999999999999999999887 8889999999999 9999999999998775
No 121
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.65 E-value=3e-17 Score=123.02 Aligned_cols=96 Identities=25% Similarity=0.300 Sum_probs=85.4
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHH
Q 022927 160 RGSTSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTD 239 (290)
Q Consensus 160 ~~s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~ 239 (290)
...+..+.+++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+
T Consensus 17 ~~~~~~~~~~~Ll~~g~~~~~~d~~g~t-------~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~ 89 (115)
T 2l6b_A 17 AKNGHAEEVKKLLSKGADVNARSKDGNT-------PLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHE 89 (115)
T ss_dssp HHHTCHHHHHHHTTTTCCSSCCCSSSCC-------TTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCC-------HHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHH
Confidence 3445677889999999998887766555 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCChh
Q 022927 240 IAFILMESGANMDCKNAQGESPL 262 (290)
Q Consensus 240 iv~~Ll~~Ga~in~~d~~G~TpL 262 (290)
++++|+++|+++|.++..|.||-
T Consensus 90 ~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 90 IVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999884
No 122
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.65 E-value=2.5e-16 Score=113.61 Aligned_cols=82 Identities=32% Similarity=0.392 Sum_probs=75.5
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCccccccchHHHHHHHcCCHHHHHHHHHCCCCCcccccCCCcHHHHHHHcCCHHHH
Q 022927 162 STSNSNFSSIFNPGQVTNGATDKPRMEYEVNGEGLRDAIKNGDAAAVKKLLSEGVDANFCDKQGMSLLHLAALFNRTDIA 241 (290)
Q Consensus 162 s~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~g~~vn~~d~~g~TpLh~A~~~g~~~iv 241 (290)
.+..+++++|++.|++++..+..+.+ |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 12 ~~~~~~v~~Ll~~g~~~n~~d~~g~t-------~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~ 84 (93)
T 1n0q_A 12 NGHLEVVKLLLEAGADVNAKDKNGRT-------PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 84 (93)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCC-------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCC-------HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 45567889999999999888776655 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCC
Q 022927 242 FILMESGAN 250 (290)
Q Consensus 242 ~~Ll~~Ga~ 250 (290)
++|+++|++
T Consensus 85 ~~Ll~~ga~ 93 (93)
T 1n0q_A 85 KLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 999999985
No 123
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.57 E-value=3.1e-15 Score=111.39 Aligned_cols=72 Identities=22% Similarity=0.228 Sum_probs=65.0
Q ss_pred CcccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCChhhhhhccCCHHHHHHHHhCCCCCCCCCC
Q 022927 218 ANFCDKQGMSLLHLAALFNRTDIAFILMESGANMDCKNAQGESPLDCAPVTLQYKMRQKMEEDKNNVGSTTS 289 (290)
Q Consensus 218 vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~in~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAdin~~~~ 289 (290)
.+..|..|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 344578899999999999999999999999999999999999999999999999999999999999998874
No 124
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.56 E-value=5e-16 Score=140.63 Aligned_cols=93 Identities=12% Similarity=-0.027 Sum_probs=77.3
Q ss_pred chHHHHHHHcCCHHHHHHHHHCCCCC---cccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCChhhhhh
Q 022927 193 GEGLRDAIKNGDAAAVKKLLSEGVDA---NFCDKQGMSLLHLAALFNRTDIAFILMESGANM---DCKNAQGESPLDCAP 266 (290)
Q Consensus 193 ~t~Lh~A~~~g~~~~v~~Ll~~g~~v---n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~Ga~i---n~~d~~G~TpL~~A~ 266 (290)
.||||+|+..|+.++|++|++.|+.. +..+..|.||||+|+..|+.+++++|+++|+++ +..+.+ +||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 37999999999999999999999832 233456789999999999999999999999862 333333 99999999
Q ss_pred ccCCHHHHHHHHhCCCCCCC
Q 022927 267 VTLQYKMRQKMEEDKNNVGS 286 (290)
Q Consensus 267 ~~g~~~iv~~Ll~~GAdin~ 286 (290)
..|+.+++++|+++|++++.
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEAT 191 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHH
T ss_pred HCCCHHHHHHHHHcCCccch
Confidence 99999999999999999654
No 125
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.53 E-value=6.1e-16 Score=142.72 Aligned_cols=58 Identities=22% Similarity=0.569 Sum_probs=0.0
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
..+|+.|+.+|++++||||||.||+|||..||.+++++|..+ .+++|||+.||..+..
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~-~~~~rvC~~C~~~l~~ 432 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLK-DRMAKVCDGCFGELKK 432 (434)
T ss_dssp -----------------------------------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCC-CCcCEecHHHHHHHHh
Confidence 467999999999999999999999999999999999988555 6899999999998854
No 126
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=95.19 E-value=0.0063 Score=47.11 Aligned_cols=50 Identities=18% Similarity=0.379 Sum_probs=40.8
Q ss_pred cccccccCCCCC-ccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIR-SNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~-~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|..|..+|. ++++.+-|..|..-||.+|.... + ....=+|..|+...
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~---~----~~~~W~C~vC~k~r 118 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAH---P----EEQGWLCDPCHLAR 118 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECC---S----SSSSCEEHHHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhccccccc---C----CCCcEeeHHHHHHH
Confidence 456899999999 55899999999999999998321 2 35778999999763
No 127
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=95.16 E-value=0.007 Score=45.78 Aligned_cols=53 Identities=11% Similarity=0.243 Sum_probs=42.1
Q ss_pred cccccccCCCCC-ccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIR-SNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~-~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|..|+.+|+ ++++.|-|..|..-||.+|.... + .+.....=+|..|+...
T Consensus 55 ~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~---~-~~~~~~~W~C~vC~k~r 108 (134)
T 1zbd_B 55 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET---S-NNRPHPVWLCKICLEQR 108 (134)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC---C-CSSSSCCEEEHHHHHHH
T ss_pred CccccccCCCcccccCCCCCCCCCCcccccccCCcc---C-CCCCccceechhhHHHH
Confidence 356899999997 66899999999999999997643 1 12346778999999764
No 128
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=94.38 E-value=0.023 Score=36.70 Aligned_cols=27 Identities=26% Similarity=0.534 Sum_probs=22.5
Q ss_pred ccccccCCCCCccccccccccccceecCCC
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
..|..|.++-.++ ...|| ||.+||..+
T Consensus 16 ~rC~~C~kkvgl~--~f~Cr-Cg~~FC~~H 42 (64)
T 1wfh_A 16 NRCTVCRKRVGLT--GFMCR-CGTTFCGSH 42 (64)
T ss_dssp CCCTTTCCCCCTT--CEECS-SSCEECTTT
T ss_pred CcChhhCCccCcc--CEEee-cCCEecccc
Confidence 3578999988877 69996 999999865
No 129
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=93.96 E-value=0.016 Score=54.99 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=30.0
Q ss_pred cccccccCCCC-CccccccccccccceecCCCCCC
Q 022927 5 DLQNLRLISHI-RSNLLQHHCRCCGRTLCHEHSSD 38 (290)
Q Consensus 5 ~~~~~~c~~~f-~~~~rrhhCr~cg~v~C~~c~~~ 38 (290)
-..|+.|+..| +++++.|||+.||.++|..|...
T Consensus 529 ~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 529 TTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp CCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 35689999998 79999999999999999999764
No 130
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=93.91 E-value=0.031 Score=37.14 Aligned_cols=27 Identities=30% Similarity=0.671 Sum_probs=22.4
Q ss_pred ccccccCCCCCccccccccccccceecCCC
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
..|..|.++-.++ ...|| ||.+||..+
T Consensus 26 ~RC~~C~kkvgL~--~f~Cr-Cg~~FCs~H 52 (74)
T 1wfp_A 26 TRCLSCNKKVGVT--GFKCR-CGSTFCGTH 52 (74)
T ss_dssp CBCSSSCCBCTTT--CEECT-TSCEECTTT
T ss_pred ccchhhcCccccc--ceEec-cCCEecccc
Confidence 3578999998887 79995 999999865
No 131
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=93.67 E-value=0.038 Score=37.87 Aligned_cols=27 Identities=22% Similarity=0.533 Sum_probs=22.4
Q ss_pred cccccCCCCCccccccccccccceecCCC
Q 022927 7 QNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 7 ~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
.|..|+++-.++ -..+|| ||.+||..+
T Consensus 27 rC~~C~kkvgl~-~~f~Cr-Cg~~FC~~H 53 (85)
T 1wff_A 27 HCFLCGKKTGLA-TSFECR-CGNNFCASH 53 (85)
T ss_dssp BCSSSCCBCSSS-SCEECT-TCCEECTTT
T ss_pred cchhhCCeeccc-CCeEcC-CCCEecccC
Confidence 578899998876 359998 999999865
No 132
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=93.64 E-value=0.034 Score=36.95 Aligned_cols=26 Identities=23% Similarity=0.580 Sum_probs=22.0
Q ss_pred cccccCCCCCccccccccccccceecCCC
Q 022927 7 QNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 7 ~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
.|..|+++-.++ ...|| ||.+||..+
T Consensus 27 RC~~CrKkvgL~--gf~Cr-Cg~~FCs~H 52 (74)
T 1wfl_A 27 RCFMCRKKVGLT--GFDCR-CGNLFCGLH 52 (74)
T ss_dssp BCSSSCCBCGGG--CEECT-TSCEECSSS
T ss_pred cChhhCCccccc--CeecC-CCCEechhc
Confidence 488899988877 48999 999999865
No 133
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=93.30 E-value=0.0096 Score=38.05 Aligned_cols=28 Identities=11% Similarity=0.307 Sum_probs=23.5
Q ss_pred cccccCCCCCccccccccccccceecCCC
Q 022927 7 QNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 7 ~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
.|++|+..|.-.. +..|..|+++||.+|
T Consensus 17 ~C~~C~~~~~~~~-~y~C~~C~~~FC~dC 44 (59)
T 1z60_A 17 FCYGCQGELKDQH-VYVCAVCQNVFCVDC 44 (59)
T ss_dssp EETTTTEECTTSE-EECCTTTTCCBCHHH
T ss_pred cccccCcccCCCc-cEECCccCcCcccch
Confidence 5999999996322 478999999999998
No 134
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=92.14 E-value=0.083 Score=34.09 Aligned_cols=27 Identities=22% Similarity=0.503 Sum_probs=22.2
Q ss_pred ccccccCCCCCccccccccccccceecCCC
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
..|..|.++-.++ ...| .||.+||..+
T Consensus 16 ~rC~~C~kkvgl~--~f~C-rCg~~FC~~H 42 (64)
T 1wg2_A 16 NRCFSCNKKVGVM--GFKC-KCGSTFCGSH 42 (64)
T ss_dssp CSCTTTCCCCTTS--CEEC-TTSCEECSSS
T ss_pred CcChhhCCccccc--CeEe-ecCCEecccC
Confidence 3578999988777 6999 5999999865
No 135
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=91.27 E-value=0.16 Score=34.53 Aligned_cols=57 Identities=18% Similarity=0.293 Sum_probs=44.9
Q ss_pred ccccccCCCCCccccccccccccce-----ecCCCCCCcccccCCCCCCcccccccchhhhccc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRT-----LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 64 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v-----~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 64 (290)
..|-.|+..-.+-.+.+||..|+.- ||..|-..-..++.-| -..-.|..|...+++.
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~~~~afCPeCgq~Le~lkACG--A~~yFC~~C~~LiSkk 64 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACG--AVDYFCQNGHGLISKK 64 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEEEEEEECSSSCSCCCEEEETT--EEEECCTTTTCCCCTT
T ss_pred CCCCCCCCccccCCCceECccccccCCCcccCcchhhHHHHHHhcC--CcCeeeccCCCEeecc
Confidence 4578899999998999999999976 8999987766666666 3467888888877543
No 136
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.39 E-value=0.2 Score=33.48 Aligned_cols=48 Identities=17% Similarity=0.359 Sum_probs=38.1
Q ss_pred ccccccCCCCC-ccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 6 LQNLRLISHIR-SNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 6 ~~~~~c~~~f~-~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
..|..|+.+|+ +++|---|+.|-.-+|.+|--.. ....-.|..|+...
T Consensus 26 r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~--------~~~~W~C~VC~k~~ 74 (76)
T 2csz_A 26 RTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE--------SNGTWRCKVCSGPS 74 (76)
T ss_dssp CBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC--------STTCEEEHHHHSSC
T ss_pred cchhhhCccccccccCCCcCcccChhhcccccccC--------CCCCEEEeeCchhh
Confidence 46899999999 67799999999999999994321 12567898888654
No 137
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.04 E-value=0.21 Score=32.52 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=22.2
Q ss_pred cccccCCCCCcccc-ccccccccceecCCC
Q 022927 7 QNLRLISHIRSNLL-QHHCRCCGRTLCHEH 35 (290)
Q Consensus 7 ~~~~c~~~f~~~~r-rhhCr~cg~v~C~~c 35 (290)
.|..|+++-.+... -..| .||.+||..+
T Consensus 17 rC~~C~kk~gL~~~egf~C-rCg~~FC~~H 45 (67)
T 1x4w_A 17 RCFQCQTKLELVQQELGSC-RCGYVFCMLH 45 (67)
T ss_dssp BCSSSCCBCCHHHHHHHCC-SSSCCCCTTT
T ss_pred cchhhCCeecccccCceEe-cCCCEehhcc
Confidence 47789998887654 4789 7999999865
No 138
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=81.79 E-value=0.29 Score=30.06 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=34.2
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|-.|...|.--.+.-....||.+||..|...+.... ..|..|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~--------~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG--------YRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT--------CCCTTSCCSS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC--------CcCCCCCCcC
Confidence 356788888886544555667799999999987765421 5677776544
No 139
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=79.14 E-value=0.76 Score=31.32 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=26.9
Q ss_pred CCcccccccccCCCCCccccccccccccc----eecCCCCCC
Q 022927 1 MTHHDLQNLRLISHIRSNLLQHHCRCCGR----TLCHEHSSD 38 (290)
Q Consensus 1 ~~~~~~~~~~c~~~f~~~~rrhhCr~cg~----v~C~~c~~~ 38 (290)
+.|....|-+|+.. .+..+|++|..|.. -+|..|-..
T Consensus 17 ~~H~~~~Cd~C~~~-pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 17 VQHVGFKCDNCGIE-PIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp CEESSCCCSSSCCS-SEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred CeeCcCCCCCCCCC-cceeceEECCcCCCCcceecHHHHHhC
Confidence 35777888999753 46678999999975 477777543
No 140
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=78.96 E-value=0.6 Score=28.59 Aligned_cols=49 Identities=10% Similarity=0.160 Sum_probs=32.2
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|-.|...|.--.+-..-..||.+||..|...+.. ....|..|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~--------~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG--------SHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT--------TCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHH--------cCCcCcCCCCEe
Confidence 4568888888865433333336999999999866542 234687776543
No 141
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=76.84 E-value=0.87 Score=30.19 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=34.1
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.--.. -.||.+||..|...+....... ......|..|...+.
T Consensus 12 ~~~C~IC~~~~~~p~~----l~CgH~fC~~Ci~~~~~~~~~~-~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTEPLS----LDCGHSLCRACITVSNKEAVTS-MGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSSCCC----CSSSCCCCHHHHSCCCCCCSSS-CCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCCeeE----CCCCCHHHHHHHHHHHHhcccC-CCCCCcCCCCCCcCC
Confidence 3457777777653211 2699999999988776432211 234678998977664
No 142
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=76.37 E-value=2.7 Score=27.63 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=34.1
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhccc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRT 64 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~ 64 (290)
...|-.|...|..-.. ..--.||.+||..|...+.. ..+.|..|...+...
T Consensus 15 ~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 15 GLECPVCKEDYALGES-VRQLPCNHLFHDSCIVPWLE--------QHDSCPVCRKSLTGQ 65 (78)
T ss_dssp SCCCTTTTSCCCTTSC-EEECTTSCEEETTTTHHHHT--------TTCSCTTTCCCCCCS
T ss_pred CCCCeeCCccccCCCC-EEEeCCCCeecHHHHHHHHH--------cCCcCcCcCCccCCc
Confidence 4568888888753321 11125999999999887753 125799998777533
No 143
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=76.02 E-value=1.1 Score=31.29 Aligned_cols=56 Identities=20% Similarity=0.325 Sum_probs=37.2
Q ss_pred ccccccCCCCCccccccccccccce-----ecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRT-----LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v-----~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
..|-.|+..-.+..+.+||..|++- +|..|-..-..|.--| ----.|..|+..+++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACG--AvdYFC~~chgLiSK 93 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACG--AVDYFCQHGHGLISK 93 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETT--EEEEEETTTTEEECT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhc--CcchhhccCCceeec
Confidence 4577888888888888889999875 6777765444443333 223456777776643
No 144
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.58 E-value=0.4 Score=28.76 Aligned_cols=26 Identities=27% Similarity=0.488 Sum_probs=20.3
Q ss_pred ccccccCCCCCcc--cccccccccccee
Q 022927 6 LQNLRLISHIRSN--LLQHHCRCCGRTL 31 (290)
Q Consensus 6 ~~~~~c~~~f~~~--~rrhhCr~cg~v~ 31 (290)
..|-.|+..|.+. .|+|.|.-||..+
T Consensus 13 ~~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 13 KICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp CCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred eeCCcccccccchHHHHhhhhhcCcchh
Confidence 3578899999865 4889998888754
No 145
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.43 E-value=0.56 Score=30.67 Aligned_cols=49 Identities=12% Similarity=0.219 Sum_probs=32.3
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.--. - -.||.+||..|...+... ....+.|..|...+.
T Consensus 20 ~~~C~IC~~~~~~~~---~-~~CgH~fC~~Ci~~~~~~-----~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 20 EVICPICLDILQKPV---T-IDCGHNFCLKCITQIGET-----SCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCBCTTTCSBCSSEE---E-CTTCCEEEHHHHHHHCSS-----SCSCCCCSSSCCCCC
T ss_pred CCEeccCCcccCCeE---E-cCCCChhhHHHHHHHHHc-----CCCCCCCCCCCCcCC
Confidence 345777777766211 1 279999999998766431 134567888877664
No 146
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.02 E-value=1 Score=30.15 Aligned_cols=52 Identities=13% Similarity=0.271 Sum_probs=32.7
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.--. . -.||.+||..|...+...... ......|..|...+.
T Consensus 19 ~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~~~~~~--~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELLTQPL---S-LDCGHSFCQACLTANHKKSML--DKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCCSSCB---C-CSSSCCBCTTHHHHHHHHHHH--TTSCCCCTTTCCSSC
T ss_pred CCCCCCCCcccCCce---e-CCCCCHHHHHHHHHHHHHhhc--CCCCCcCCCCCCccC
Confidence 345777777765321 1 279999999998766432110 123567888887764
No 147
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.68 E-value=1.4 Score=29.78 Aligned_cols=54 Identities=17% Similarity=0.282 Sum_probs=37.0
Q ss_pred ccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
....|-.|...|.-..+.-.--.||.+||..|...+.... .....|..|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-----INGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-----SSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-----CCCcCCCCCCCccc
Confidence 3456888888887644433344799999999987775421 23567888877654
No 148
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.87 E-value=0.92 Score=29.63 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=32.4
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
...|-.|...|.- ...-..||.+||..|...+... .+.|..|...+..
T Consensus 15 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 15 YILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY--------SNRCPKCNIVVHQ 62 (72)
T ss_dssp GGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH--------CSSCTTTCCCCCS
T ss_pred CCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc--------CCcCCCcCcccCc
Confidence 3457777666642 3333589999999998776531 3578888777643
No 149
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=68.57 E-value=2 Score=30.56 Aligned_cols=15 Identities=27% Similarity=0.580 Sum_probs=10.3
Q ss_pred cccccccccccccee
Q 022927 17 SNLLQHHCRCCGRTL 31 (290)
Q Consensus 17 ~~~rrhhCr~cg~v~ 31 (290)
+..-..-|+.||.+|
T Consensus 63 L~v~p~~C~~CG~~F 77 (105)
T 2gmg_A 63 LLIKPAQCRKCGFVF 77 (105)
T ss_dssp EEECCCBBTTTCCBC
T ss_pred EEEECcChhhCcCee
Confidence 344456788888887
No 150
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.38 E-value=0.92 Score=29.74 Aligned_cols=49 Identities=8% Similarity=0.047 Sum_probs=32.8
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|..|...|.--..-.. -.||.+||..|...+... .+.|..|...+.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~-~~C~H~f~~~Ci~~~~~~--------~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGI-CPCKHAFHRKCLIKWLEV--------RKVCPLCNMPVL 63 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEE-ETTTEEEEHHHHHHHHHH--------CSBCTTTCCBCS
T ss_pred CCCCcCCCcccCCCCcEEE-cCCCCEecHHHHHHHHHc--------CCcCCCcCcccc
Confidence 3468888888764332211 269999999998776531 237999977664
No 151
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=67.09 E-value=5.8 Score=25.05 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=25.8
Q ss_pred ccccccccCCCCCcccc--cccccc--ccceecCCCCCCcc
Q 022927 4 HDLQNLRLISHIRSNLL--QHHCRC--CGRTLCHEHSSDQM 40 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~r--rhhCr~--cg~v~C~~c~~~~~ 40 (290)
+-+.|-.|+...--... +-.|+. ||..||..|.....
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~ 45 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE 45 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSG
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcc
Confidence 34667777766654433 334888 99999999987653
No 152
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.76 E-value=3.2 Score=26.63 Aligned_cols=21 Identities=19% Similarity=0.513 Sum_probs=15.6
Q ss_pred cCCCCCccccccccccccceecCC
Q 022927 11 LISHIRSNLLQHHCRCCGRTLCHE 34 (290)
Q Consensus 11 c~~~f~~~~rrhhCr~cg~v~C~~ 34 (290)
|.+. .++ ..+|+.||..||.+
T Consensus 20 Ck~~-~ll--~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 20 CRQR-EMM--KLTCERCSRNFCIK 40 (63)
T ss_dssp CCCC-CSS--CCBCSSSCCBCCHH
T ss_pred CCCC-Ccc--ceECCCCCcccCcc
Confidence 7765 222 57999999999974
No 153
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=66.44 E-value=3.2 Score=26.39 Aligned_cols=51 Identities=10% Similarity=0.086 Sum_probs=35.4
Q ss_pred CCcccccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 1 MTHHDLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 1 ~~~~~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
|.-....|-.|...|.- ...--.||.+||..|...+.. ....|..|...+.
T Consensus 1 ~~~~~~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 1 MATVAERCPICLEDPSN---YSMALPCLHAFCYVCITRWIR--------QNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCCCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHH--------HSCSTTTTCCCCC
T ss_pred CCCCCCCCeeCCccccC---CcEecCCCCeeHHHHHHHHHh--------CcCcCcCCChhhH
Confidence 45566778889888752 224457999999999876643 1247888876664
No 154
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=66.34 E-value=6.4 Score=24.06 Aligned_cols=43 Identities=16% Similarity=0.171 Sum_probs=28.6
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.-- .--.||.+||..|... ....|..|...+.
T Consensus 6 ~~~C~IC~~~~~~p----~~l~CgH~fC~~Ci~~-----------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 6 FLRCQQCQAEAKCP----KLLPCLHTLCSGCLEA-----------SGMQCPICQAPWP 48 (56)
T ss_dssp CSSCSSSCSSCBCC----SCSTTSCCSBTTTCSS-----------SSSSCSSCCSSSS
T ss_pred CCCceEeCCccCCe----EEcCCCCcccHHHHcc-----------CCCCCCcCCcEee
Confidence 34577777777532 2346999999999755 2346777866553
No 155
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=65.56 E-value=11 Score=25.31 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=20.6
Q ss_pred CCcccccccccC-CCC-----CccccccccccccceecCC
Q 022927 1 MTHHDLQNLRLI-SHI-----RSNLLQHHCRCCGRTLCHE 34 (290)
Q Consensus 1 ~~~~~~~~~~c~-~~f-----~~~~rrhhCr~cg~v~C~~ 34 (290)
|+||--+-|+=- ..| ..-..++.|+.||.|+=..
T Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~em~~y~C~vCGyvYD~~ 40 (81)
T 2kn9_A 1 MAHHHHHHMGTLEAQTQGPGSMNDYKLFRCIQCGFEYDEA 40 (81)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCSSCCCEEEETTTCCEEETT
T ss_pred CcccccccccceeecccCCcCCCCcceEEeCCCCEEEcCC
Confidence 666666556521 111 1123589999999998653
No 156
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=65.55 E-value=2.4 Score=27.85 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=10.4
Q ss_pred ccccCCCCCcccc-ccccccccc
Q 022927 8 NLRLISHIRSNLL-QHHCRCCGR 29 (290)
Q Consensus 8 ~~~c~~~f~~~~r-rhhCr~cg~ 29 (290)
|-.|+..|.+-.+ .-+|+.||.
T Consensus 31 C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 31 CAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CSSSCCEECCCTTSTTCCSSSCC
T ss_pred CCCCCCcceeCCCCCccCCCCCc
Confidence 4556666554322 234555443
No 157
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.90 E-value=1.2 Score=28.80 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=32.9
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
...|-.|...|.- .--.||.+||..|...+.. ....|..|...+..
T Consensus 15 ~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 15 EEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD--------RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC--------CCSSCHHHHHCTTC
T ss_pred CCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH--------CcCcCCCcCCcccC
Confidence 3467788777754 3457999999999765532 35679999877753
No 158
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.72 E-value=0.8 Score=29.86 Aligned_cols=46 Identities=11% Similarity=0.041 Sum_probs=30.5
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.-- .--.||.+||..|...+.. ....|..|...+.
T Consensus 15 ~~~C~IC~~~~~~~----~~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 15 VPECAICLQTCVHP----VSLPCKHVFCYLCVKGASW--------LGKRCALCRQEIP 60 (71)
T ss_dssp CCBCSSSSSBCSSE----EEETTTEEEEHHHHHHCTT--------CSSBCSSSCCBCC
T ss_pred CCCCccCCcccCCC----EEccCCCHHHHHHHHHHHH--------CCCcCcCcCchhC
Confidence 34577787776422 1236999999999765542 1267888877664
No 159
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=61.78 E-value=2 Score=30.88 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=31.0
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.--. --.||.+||..|...+.. .....|..|...+.
T Consensus 16 ~~C~iC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 16 CQCGICMEILVEPV----TLPCNHTLCKPCFQSTVE-------KASLCCPFCRRRVS 61 (115)
T ss_dssp HBCTTTCSBCSSCE----ECTTSCEECHHHHCCCCC-------TTTSBCTTTCCBCH
T ss_pred CCCccCCcccCcee----EcCCCCHHhHHHHHHHHh-------HCcCCCCCCCcccC
Confidence 45777777665211 127999999999877643 22367888887664
No 160
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=61.01 E-value=5.8 Score=26.38 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=16.7
Q ss_pred cCCCCCccccccccccccceecCCC
Q 022927 11 LISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 11 c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
|++. .|+ -..|+.||.+||...
T Consensus 22 C~~~-dfl--pf~C~~C~~~FC~~H 43 (75)
T 1wys_A 22 CRQR-DFL--PFVCDGCSGIFCLEH 43 (75)
T ss_dssp TCCC-SCC--CEECTTTCCEECSTT
T ss_pred CCCc-cce--eeECcccCcCcCccc
Confidence 7665 232 689999999999865
No 161
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=60.91 E-value=0.98 Score=31.79 Aligned_cols=47 Identities=15% Similarity=0.345 Sum_probs=32.8
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|. ....|-.||.+||..|...+.... ...|..|...+.
T Consensus 23 ~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~-------~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 23 FRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQ-------RAQCPHCRAPLQ 69 (100)
T ss_dssp TBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHT-------CSBCTTTCCBCC
T ss_pred CCCccCCcccc---CccccCCCCChhhHHHHHHHHHHC-------cCCCCCCCCcCC
Confidence 34666666654 456678999999999987765421 167888877664
No 162
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.89 E-value=0.79 Score=29.35 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=29.5
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.--.. -.||.+||..|...+.. .....|..|...+.
T Consensus 16 ~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 16 YKCEKCHLVLCSPKQ----TECGHRFCESCMAALLS-------SSSPKCTACQESIV 61 (66)
T ss_dssp EECTTTCCEESSCCC----CSSSCCCCHHHHHHHHT-------TSSCCCTTTCCCCC
T ss_pred CCCCCCChHhcCeeE----CCCCCHHHHHHHHHHHH-------hCcCCCCCCCcCCC
Confidence 346667666542211 48999999999876653 23456888876653
No 163
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=57.85 E-value=4.3 Score=25.30 Aligned_cols=14 Identities=36% Similarity=1.004 Sum_probs=10.3
Q ss_pred cccccce-------ecCCCCC
Q 022927 24 CRCCGRT-------LCHEHSS 37 (290)
Q Consensus 24 Cr~cg~v-------~C~~c~~ 37 (290)
||.||.. .|.+|.-
T Consensus 20 CrRCG~~syH~qK~~Ca~CGy 40 (57)
T 1vq8_1 20 CRRCGEKSYHTKKKVCSSCGF 40 (57)
T ss_dssp CTTTCSEEEETTTTEETTTCT
T ss_pred ccccCChhhhccccccccccC
Confidence 8888876 6777753
No 164
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=57.23 E-value=3.3 Score=25.98 Aligned_cols=11 Identities=27% Similarity=0.912 Sum_probs=5.7
Q ss_pred cccccccccee
Q 022927 21 QHHCRCCGRTL 31 (290)
Q Consensus 21 rhhCr~cg~v~ 31 (290)
.+.|..||+.|
T Consensus 32 p~~C~~C~k~F 42 (60)
T 4gzn_C 32 PRSCPECGKCF 42 (60)
T ss_dssp CEECTTTCCEE
T ss_pred CeECCCCCCCc
Confidence 44555555544
No 165
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=56.89 E-value=1.2 Score=32.52 Aligned_cols=46 Identities=13% Similarity=0.281 Sum_probs=30.9
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.-- . --.||.+||..|...+.. ...+.|..|...+.
T Consensus 53 ~~C~IC~~~~~~p---~-~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRP---I-TTVCQHNVCKDCLDRSFR-------AQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSE---E-ECTTSCEEEHHHHHHHHH-------TTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCc---E-EeeCCCcccHHHHHHHHh-------HCcCCCCCCCccCC
Confidence 4577777766521 1 127999999999876653 23457888877664
No 166
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.47 E-value=3.1 Score=26.10 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=22.2
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCccc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMT 41 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~ 41 (290)
...|-.|...|.-- .. -.||.+||..|...+..
T Consensus 20 ~~~C~IC~~~~~~p---~~-~~CgH~fC~~Ci~~~~~ 52 (63)
T 2ysj_A 20 EVICPICLDILQKP---VT-IDCGHNFCLKCITQIGE 52 (63)
T ss_dssp CCBCTTTCSBCSSC---EE-CTTSSEECHHHHHHHHH
T ss_pred CCCCCcCCchhCCe---EE-eCCCCcchHHHHHHHHH
Confidence 34577777766522 22 27999999999877654
No 167
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=55.37 E-value=4.6 Score=27.48 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=22.3
Q ss_pred ccccCCCCCc--cccccccccccceecCCCCCCc
Q 022927 8 NLRLISHIRS--NLLQHHCRCCGRTLCHEHSSDQ 39 (290)
Q Consensus 8 ~~~c~~~f~~--~~rrhhCr~cg~v~C~~c~~~~ 39 (290)
|-+|+..|.. ..++-.|..||..||..|-..+
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 3367665532 2356789999999999997543
No 168
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=53.88 E-value=2.3 Score=28.31 Aligned_cols=52 Identities=8% Similarity=0.158 Sum_probs=33.3
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.-- . --.||.+||..|...+..... .......|..|...+.
T Consensus 19 ~~~C~IC~~~~~~p---~-~~~CgH~fC~~Ci~~~~~~~~--~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 19 EVTCPICLELLKEP---V-SADCNHSFCRACITLNYESNR--NTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTSCTTTCSCCSSC---E-ECTTSCCBCHHHHHHHHHHSB--CTTSCBCCTTTCCCCC
T ss_pred CCCCcCCChhhCcc---e-eCCCCCHHHHHHHHHHHHhcc--CCCCCCCCCCCCCcCC
Confidence 34577777776522 1 236999999999876654221 1234678888877664
No 169
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=52.09 E-value=4.6 Score=28.37 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=21.6
Q ss_pred CcccccccccCCCCCccccccccccccce-ecCCC
Q 022927 2 THHDLQNLRLISHIRSNLLQHHCRCCGRT-LCHEH 35 (290)
Q Consensus 2 ~~~~~~~~~c~~~f~~~~rrhhCr~cg~v-~C~~c 35 (290)
.|....|-+|+.. .+...|++|..|-.. +|..|
T Consensus 28 ~H~gv~Cd~C~~~-pI~G~RykC~~C~d~DLC~~C 61 (98)
T 2dip_A 28 KHLGIPCNNCKQF-PIEGKCYKCTECIEYHLCQEC 61 (98)
T ss_dssp SCCCCCCSSSCCS-SCCSCEEEESSSSSCEEEHHH
T ss_pred ccCCCCCcCCCCC-CcccCeEECCCCCCccHHHHH
Confidence 4666778888753 245577888888543 66666
No 170
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=50.95 E-value=4 Score=27.92 Aligned_cols=22 Identities=18% Similarity=0.517 Sum_probs=15.7
Q ss_pred cCCCCCccccccccccccceecCCC
Q 022927 11 LISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 11 c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
|.+. .+ =-.+|+.||..||...
T Consensus 33 Ck~~-~~--l~f~C~~C~~~FC~~H 54 (86)
T 1wfe_A 33 CTDV-EL--VAVICPYCEKNFCLRH 54 (86)
T ss_dssp CCCE-ES--SCEECTTTCCEECGGG
T ss_pred CCCC-Cc--cceECCCCCccccccc
Confidence 6554 22 2469999999999854
No 171
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.83 E-value=5.2 Score=24.30 Aligned_cols=10 Identities=40% Similarity=0.880 Sum_probs=4.8
Q ss_pred ccccccccce
Q 022927 21 QHHCRCCGRT 30 (290)
Q Consensus 21 rhhCr~cg~v 30 (290)
|++|..||.+
T Consensus 37 R~~C~kCG~t 46 (50)
T 3j20_Y 37 RWACGKCGYT 46 (50)
T ss_dssp EEECSSSCCE
T ss_pred eEECCCCCCE
Confidence 4445555443
No 172
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=50.58 E-value=12 Score=26.81 Aligned_cols=43 Identities=21% Similarity=0.405 Sum_probs=28.5
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
..|-.|...|. .-.--..||.+||..|...+.. ..|..|...+
T Consensus 23 ~~C~IC~~~~~---~pv~~~~CgH~fC~~Ci~~~~~----------~~CP~Cr~~~ 65 (117)
T 1jm7_B 23 LRCSRCTNILR---EPVCLGGCEHIFCSNCVSDCIG----------TGCPVCYTPA 65 (117)
T ss_dssp TSCSSSCSCCS---SCBCCCSSSCCBCTTTGGGGTT----------TBCSSSCCBC
T ss_pred CCCCCCChHhh---CccEeCCCCCHHHHHHHHHHhc----------CCCcCCCCcC
Confidence 45667766553 2222237999999999876642 5688887665
No 173
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=50.35 E-value=9.7 Score=22.66 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=14.3
Q ss_pred cccccCCCCCcccc----ccccccccc
Q 022927 7 QNLRLISHIRSNLL----QHHCRCCGR 29 (290)
Q Consensus 7 ~~~~c~~~f~~~~r----rhhCr~cg~ 29 (290)
.|+.|++.|+.-.= --+|-.||.
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EeeccCCCccHHHHhhCCCcccCccCc
Confidence 37888888884332 345666654
No 174
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=50.04 E-value=5.5 Score=23.75 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=10.9
Q ss_pred cccccccccceec
Q 022927 20 LQHHCRCCGRTLC 32 (290)
Q Consensus 20 rrhhCr~cg~v~C 32 (290)
+++.|+.||.|+=
T Consensus 3 ~~y~C~vCGyvyd 15 (46)
T 6rxn_A 3 QKYVCNVCGYEYD 15 (46)
T ss_dssp CCEEETTTCCEEC
T ss_pred CEEECCCCCeEEe
Confidence 5789999999875
No 175
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=49.39 E-value=9.1 Score=22.66 Aligned_cols=10 Identities=10% Similarity=-0.140 Sum_probs=6.1
Q ss_pred cccccCCCCC
Q 022927 7 QNLRLISHIR 16 (290)
Q Consensus 7 ~~~~c~~~f~ 16 (290)
.|-.|++.|.
T Consensus 6 ~C~~C~~~f~ 15 (57)
T 3uk3_C 6 ECSYCGKFFR 15 (57)
T ss_dssp BCTTTCCBCS
T ss_pred cCCCCcchhC
Confidence 3556677765
No 176
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=49.00 E-value=6.8 Score=18.92 Aligned_cols=13 Identities=15% Similarity=0.363 Sum_probs=8.6
Q ss_pred cccccccccceec
Q 022927 20 LQHHCRCCGRTLC 32 (290)
Q Consensus 20 rrhhCr~cg~v~C 32 (290)
|.+.|..||+.|-
T Consensus 2 k~~~C~~C~k~f~ 14 (27)
T 2kvh_A 2 KPFSCSLCPQRSR 14 (27)
T ss_dssp CCEECSSSSCEES
T ss_pred cCccCCCcChhhC
Confidence 4566777777663
No 177
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.86 E-value=3.9 Score=28.09 Aligned_cols=12 Identities=17% Similarity=0.368 Sum_probs=5.5
Q ss_pred ccccccccccee
Q 022927 20 LQHHCRCCGRTL 31 (290)
Q Consensus 20 rrhhCr~cg~v~ 31 (290)
|.+.|..||+.|
T Consensus 23 ~~~~C~~C~k~f 34 (98)
T 2gqj_A 23 GEAVCPTCNVVT 34 (98)
T ss_dssp SCCCCTTTCCCC
T ss_pred CCcCCCCCCCCh
Confidence 334455555444
No 178
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=48.36 E-value=1.4 Score=30.28 Aligned_cols=47 Identities=11% Similarity=-0.026 Sum_probs=31.4
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
..|-.|...|.--.. ..--.||.+||..|...+.. ....|..|...+
T Consensus 41 ~~C~IC~~~~~~~~~-~~~l~C~H~Fh~~Ci~~wl~--------~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 41 MCCPICCSEYVKGDV-ATELPCHHYFHKPCVSIWLQ--------KSGTCPVCRCMF 87 (91)
T ss_dssp SEETTTTEECCTTCE-EEEETTTEEEEHHHHHHHHT--------TTCBCTTTCCBS
T ss_pred CCCcccChhhcCCCc-EEecCCCChHHHHHHHHHHH--------cCCcCcCcCccC
Confidence 457888877764322 22245999999999877653 124788887655
No 179
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=47.98 E-value=5.6 Score=29.85 Aligned_cols=18 Identities=33% Similarity=0.420 Sum_probs=12.9
Q ss_pred eeeecCCceeeecCCCCC
Q 022927 109 LECKCGMPLCICEAPAPA 126 (290)
Q Consensus 109 ~~~~~~~~~c~~~~p~p~ 126 (290)
.-|..||-+-|...+...
T Consensus 94 gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 94 THCSNGQKLSINVVAANA 111 (138)
T ss_dssp TTGGGTCEEEEEEECCC-
T ss_pred CccccCCEEEEEEcCCCC
Confidence 468899999887765543
No 180
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=47.66 E-value=2.6 Score=25.90 Aligned_cols=28 Identities=21% Similarity=0.349 Sum_probs=18.4
Q ss_pred cccccccCCCCCccccccccccccce-ecCCC
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRT-LCHEH 35 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v-~C~~c 35 (290)
...|-+|++. + .+|.||..|-.. +|..|
T Consensus 6 ~~~Cd~C~~~--i-g~R~~C~~C~dyDLC~~C 34 (52)
T 1tot_A 6 VYTCNECKHH--V-ETRWHCTVCEDYDLCINC 34 (52)
T ss_dssp CEEETTTTEE--E-SSEEEESSSSSCEECHHH
T ss_pred EEECCCCCCC--C-cceEEcCCCCCchhHHHH
Confidence 3457778876 2 577888888544 55544
No 181
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=47.64 E-value=4.3 Score=25.18 Aligned_cols=14 Identities=21% Similarity=0.562 Sum_probs=8.5
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.+.+.|..||+.|-
T Consensus 12 ~k~~~C~~C~k~F~ 25 (62)
T 1vd4_A 12 RASFKCPVCSSTFT 25 (62)
T ss_dssp SSEEECSSSCCEEE
T ss_pred CCCccCCCCCchhc
Confidence 34566777776654
No 182
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=47.17 E-value=16 Score=23.76 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=22.1
Q ss_pred ccccccccccceecCCCCCCcccccCCCCCCcc---cccccchh
Q 022927 19 LLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNV---RVCADCFN 59 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~---rvC~~C~~ 59 (290)
-.++.|+.||.|+=..=-.-...++.-.....+ -+|..|-.
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga 48 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRS 48 (70)
T ss_dssp SSCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCC
T ss_pred CceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCC
Confidence 357999999999764332222222221111122 27888864
No 183
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=46.89 E-value=11 Score=23.82 Aligned_cols=9 Identities=22% Similarity=0.080 Sum_probs=4.7
Q ss_pred ccccCCCCC
Q 022927 8 NLRLISHIR 16 (290)
Q Consensus 8 ~~~c~~~f~ 16 (290)
|-.|++.|.
T Consensus 20 C~~C~k~f~ 28 (74)
T 2lce_A 20 CDRCQASFR 28 (74)
T ss_dssp CTTSSCCBS
T ss_pred CCCCCceeC
Confidence 445555554
No 184
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=46.63 E-value=6.3 Score=24.14 Aligned_cols=15 Identities=20% Similarity=0.598 Sum_probs=11.7
Q ss_pred cccccccccceecCC
Q 022927 20 LQHHCRCCGRTLCHE 34 (290)
Q Consensus 20 rrhhCr~cg~v~C~~ 34 (290)
+++.|+.||.|+=..
T Consensus 1 ~~~~C~~CGyvYd~~ 15 (52)
T 1yk4_A 1 AKLSCKICGYIYDED 15 (52)
T ss_dssp CEEEESSSSCEEETT
T ss_pred CcEEeCCCCeEECCC
Confidence 368899999997653
No 185
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=46.46 E-value=3 Score=26.69 Aligned_cols=48 Identities=8% Similarity=0.029 Sum_probs=31.7
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.-- .....-.||.+||..|...+... ...|..|...+.
T Consensus 15 ~~C~IC~~~~~~~-~~~~~~~C~H~fc~~Ci~~~~~~--------~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 15 EKCTICLSILEEG-EDVRRLPCMHLFHQVCVDQWLIT--------NKKCPICRVDIE 62 (69)
T ss_dssp CSBTTTTBCCCSS-SCEEECTTSCEEEHHHHHHHHHH--------CSBCTTTCSBSC
T ss_pred CCCeeCCccccCC-CcEEEeCCCCHHHHHHHHHHHHc--------CCCCcCcCcccc
Confidence 4577887777422 12334569999999998776532 235888877664
No 186
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=46.28 E-value=50 Score=29.44 Aligned_cols=48 Identities=35% Similarity=0.505 Sum_probs=38.3
Q ss_pred HHHcCCHHHHHHHHHCCCCCccc------------c--cCCCcHHHHHHHcCCHHHHHHHHH
Q 022927 199 AIKNGDAAAVKKLLSEGVDANFC------------D--KQGMSLLHLAALFNRTDIAFILME 246 (290)
Q Consensus 199 A~~~g~~~~v~~Ll~~g~~vn~~------------d--~~g~TpLh~A~~~g~~~iv~~Ll~ 246 (290)
.+..|+...|+..+..|.|++.+ + ..|.|.+|+|+.+.+.+++.+|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 35568999999888888776542 1 358899999999999999988886
No 187
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=45.97 E-value=6.9 Score=19.08 Aligned_cols=11 Identities=27% Similarity=0.839 Sum_probs=6.7
Q ss_pred cccccccccee
Q 022927 21 QHHCRCCGRTL 31 (290)
Q Consensus 21 rhhCr~cg~v~ 31 (290)
.+.|..||+.|
T Consensus 2 ~~~C~~C~~~f 12 (29)
T 1ard_A 2 SFVCEVCTRAF 12 (29)
T ss_dssp CCBCTTTCCBC
T ss_pred CeECCCCCccc
Confidence 35666776654
No 188
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.85 E-value=8.1 Score=18.71 Aligned_cols=13 Identities=23% Similarity=0.749 Sum_probs=8.8
Q ss_pred cccccccccceec
Q 022927 20 LQHHCRCCGRTLC 32 (290)
Q Consensus 20 rrhhCr~cg~v~C 32 (290)
|.+.|..||+.|-
T Consensus 2 k~~~C~~C~k~f~ 14 (28)
T 2kvf_A 2 RPYSCSVCGKRFS 14 (28)
T ss_dssp CSEECSSSCCEES
T ss_pred cCccCCCCCcccC
Confidence 4566788887664
No 189
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=43.70 E-value=8.9 Score=18.70 Aligned_cols=13 Identities=31% Similarity=0.866 Sum_probs=8.7
Q ss_pred cccccccccceec
Q 022927 20 LQHHCRCCGRTLC 32 (290)
Q Consensus 20 rrhhCr~cg~v~C 32 (290)
+.+.|..||+.|-
T Consensus 2 k~~~C~~C~~~f~ 14 (30)
T 2m0d_A 2 KPYQCDYCGRSFS 14 (30)
T ss_dssp CCEECTTTCCEES
T ss_pred cCccCCCCCcccC
Confidence 4566777877664
No 190
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=43.32 E-value=11 Score=22.47 Aligned_cols=8 Identities=13% Similarity=-0.425 Sum_probs=3.4
Q ss_pred ccccccCC
Q 022927 6 LQNLRLIS 13 (290)
Q Consensus 6 ~~~~~c~~ 13 (290)
+.|-.|+.
T Consensus 6 ~~CP~C~~ 13 (50)
T 1pft_A 6 KVCPACES 13 (50)
T ss_dssp CSCTTTSC
T ss_pred EeCcCCCC
Confidence 34444433
No 191
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=42.88 E-value=9.9 Score=23.16 Aligned_cols=9 Identities=33% Similarity=0.811 Sum_probs=4.2
Q ss_pred ccccccccc
Q 022927 21 QHHCRCCGR 29 (290)
Q Consensus 21 rhhCr~cg~ 29 (290)
+|-|+.||.
T Consensus 14 k~iCpkC~a 22 (51)
T 3j21_g 14 KYVCLRCGA 22 (51)
T ss_dssp EEECTTTCC
T ss_pred CccCCCCCC
Confidence 344555544
No 192
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=42.76 E-value=15 Score=22.74 Aligned_cols=9 Identities=33% Similarity=0.877 Sum_probs=4.1
Q ss_pred ccccccccc
Q 022927 21 QHHCRCCGR 29 (290)
Q Consensus 21 rhhCr~cg~ 29 (290)
|++|..||.
T Consensus 36 r~~C~kCgy 44 (55)
T 2k4x_A 36 RYSCGRCGY 44 (55)
T ss_dssp EEECTTTCC
T ss_pred EEECCCCCC
Confidence 444444444
No 193
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=42.60 E-value=8.4 Score=18.69 Aligned_cols=13 Identities=15% Similarity=0.265 Sum_probs=8.5
Q ss_pred cccccccccceec
Q 022927 20 LQHHCRCCGRTLC 32 (290)
Q Consensus 20 rrhhCr~cg~v~C 32 (290)
|.+.|..||+.|-
T Consensus 2 k~~~C~~C~k~f~ 14 (27)
T 2kvg_A 2 APYRCPLCRAGCP 14 (27)
T ss_dssp CTEEETTTTEEES
T ss_pred cCcCCCCCCcccC
Confidence 4566777777653
No 194
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=42.39 E-value=9.8 Score=25.44 Aligned_cols=28 Identities=18% Similarity=0.407 Sum_probs=19.5
Q ss_pred cCCCCCc--cccccccc-----cccceecCCCCCC
Q 022927 11 LISHIRS--NLLQHHCR-----CCGRTLCHEHSSD 38 (290)
Q Consensus 11 c~~~f~~--~~rrhhCr-----~cg~v~C~~c~~~ 38 (290)
|+..... -.++-.|. .||..||..|...
T Consensus 33 C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~ 67 (80)
T 2jmo_A 33 CGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEA 67 (80)
T ss_dssp CCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEE
T ss_pred CCcccEECCCCCcCCCCCCCCCCCCCeeccccCcc
Confidence 5444332 24667897 8999999999643
No 195
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=42.19 E-value=16 Score=21.45 Aligned_cols=10 Identities=0% Similarity=-0.389 Sum_probs=6.7
Q ss_pred cccccCCCCC
Q 022927 7 QNLRLISHIR 16 (290)
Q Consensus 7 ~~~~c~~~f~ 16 (290)
.|-.|+..|.
T Consensus 3 ~C~~C~~~f~ 12 (57)
T 1bbo_A 3 ICEECGIRXK 12 (57)
T ss_dssp BCTTTCCBCS
T ss_pred cCCCCcCcCC
Confidence 3566777775
No 196
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=42.04 E-value=9.6 Score=18.52 Aligned_cols=12 Identities=17% Similarity=0.603 Sum_probs=7.9
Q ss_pred ccccccccceec
Q 022927 21 QHHCRCCGRTLC 32 (290)
Q Consensus 21 rhhCr~cg~v~C 32 (290)
.+.|..||+.|-
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 1rik_A 2 KFACPECPKRFM 13 (29)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 456777777664
No 197
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=41.94 E-value=8.3 Score=26.04 Aligned_cols=16 Identities=25% Similarity=0.657 Sum_probs=10.3
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.+.|-|..||+.|-.
T Consensus 25 ~~~~h~C~~Cgk~F~~ 40 (85)
T 2lv2_A 25 SAECHLCPVCGESFAS 40 (85)
T ss_dssp CCTTEECTTSCCEESS
T ss_pred CCCCEECCCCCCCcCc
Confidence 3456677777777654
No 198
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.90 E-value=7.9 Score=27.25 Aligned_cols=48 Identities=15% Similarity=0.263 Sum_probs=31.0
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.--. --.||.+||..|...+.... .....|..|...+.
T Consensus 22 ~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 22 LECPICLELIKEPV----STKCDHIFCKFCMLKLLNQK-----KGPSQCPLCKNDIT 69 (112)
T ss_dssp TSCSSSCCCCSSCC----BCTTSCCCCSHHHHHHHHSS-----SSSCCCTTTSCCCC
T ss_pred CCCcccChhhcCeE----ECCCCCHHHHHHHHHHHHhC-----CCCCCCcCCCCcCC
Confidence 35777777664211 13799999999987665421 22357888877664
No 199
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.79 E-value=9.6 Score=18.36 Aligned_cols=13 Identities=23% Similarity=0.856 Sum_probs=7.8
Q ss_pred ccccccccceecC
Q 022927 21 QHHCRCCGRTLCH 33 (290)
Q Consensus 21 rhhCr~cg~v~C~ 33 (290)
.+.|..||+.|..
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 2m0e_A 2 EHKCPHCDKKFNQ 14 (29)
T ss_dssp CCCCSSCCCCCCT
T ss_pred CCcCCCCCcccCC
Confidence 3557777766543
No 200
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=41.49 E-value=7.5 Score=23.77 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=11.2
Q ss_pred cccccccccceecC
Q 022927 20 LQHHCRCCGRTLCH 33 (290)
Q Consensus 20 rrhhCr~cg~v~C~ 33 (290)
+++.|+.||.|+=.
T Consensus 2 ~~y~C~~CGyvYd~ 15 (52)
T 1e8j_A 2 DIYVCTVCGYEYDP 15 (52)
T ss_dssp CCEECSSSCCCCCT
T ss_pred CcEEeCCCCeEEcC
Confidence 46889999998753
No 201
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=47.56 E-value=5.6 Score=19.06 Aligned_cols=13 Identities=23% Similarity=0.746 Sum_probs=7.9
Q ss_pred ccccccccceecC
Q 022927 21 QHHCRCCGRTLCH 33 (290)
Q Consensus 21 rhhCr~cg~v~C~ 33 (290)
.+-|..||+.|-.
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 4567777766543
No 202
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.20 E-value=10 Score=23.66 Aligned_cols=14 Identities=21% Similarity=0.593 Sum_probs=8.3
Q ss_pred cccccccccceecC
Q 022927 20 LQHHCRCCGRTLCH 33 (290)
Q Consensus 20 rrhhCr~cg~v~C~ 33 (290)
+.+.|..||+.|=.
T Consensus 17 ~~~~C~~C~k~f~~ 30 (73)
T 2ctu_A 17 RSQKCSKCGIIFIR 30 (73)
T ss_dssp SEEECSSSCCEEEC
T ss_pred CCeeCCcccchhCC
Confidence 45566666666544
No 203
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.19 E-value=9.8 Score=24.41 Aligned_cols=9 Identities=11% Similarity=-0.459 Sum_probs=4.6
Q ss_pred ccccCCCCC
Q 022927 8 NLRLISHIR 16 (290)
Q Consensus 8 ~~~c~~~f~ 16 (290)
|-.|++.|.
T Consensus 10 C~~C~k~f~ 18 (78)
T 2d9h_A 10 CEICGFTCR 18 (78)
T ss_dssp CSSSCCEES
T ss_pred CCCCCCeeC
Confidence 444555554
No 204
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=40.99 E-value=10 Score=18.35 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=7.3
Q ss_pred ccccccccceec
Q 022927 21 QHHCRCCGRTLC 32 (290)
Q Consensus 21 rhhCr~cg~v~C 32 (290)
.+-|..||+.|-
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 2m0f_A 2 PLKCRECGKQFT 13 (29)
T ss_dssp CEECTTTSCEES
T ss_pred CccCCCCCCccC
Confidence 355777776654
No 205
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=40.84 E-value=19 Score=24.52 Aligned_cols=16 Identities=25% Similarity=0.551 Sum_probs=13.0
Q ss_pred ccccccccccceecCC
Q 022927 19 LLQHHCRCCGRTLCHE 34 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~~ 34 (290)
..++.|+.||.|+=..
T Consensus 33 m~~y~C~vCGyvYD~~ 48 (87)
T 1s24_A 33 YLKWICITCGHIYDEA 48 (87)
T ss_dssp CCEEEETTTTEEEETT
T ss_pred CceEECCCCCeEecCC
Confidence 4689999999998653
No 206
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.81 E-value=7.7 Score=23.49 Aligned_cols=32 Identities=9% Similarity=0.281 Sum_probs=21.5
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQM 40 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~ 40 (290)
...|-.|...|.--.. -.||.+||..|...+.
T Consensus 15 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~ 46 (58)
T 2ecj_A 15 EASCSVCLEYLKEPVI----IECGHNFCKACITRWW 46 (58)
T ss_dssp CCBCSSSCCBCSSCCC----CSSCCCCCHHHHHHHT
T ss_pred CCCCccCCcccCccEe----CCCCCccCHHHHHHHH
Confidence 3457777777653211 4699999999976653
No 207
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=40.65 E-value=8.6 Score=23.82 Aligned_cols=15 Identities=20% Similarity=0.461 Sum_probs=11.9
Q ss_pred cccccccccceecCC
Q 022927 20 LQHHCRCCGRTLCHE 34 (290)
Q Consensus 20 rrhhCr~cg~v~C~~ 34 (290)
+++.|+.||.|+=..
T Consensus 2 ~~y~C~~CGyvYd~~ 16 (55)
T 2v3b_B 2 RKWQCVVCGFIYDEA 16 (55)
T ss_dssp CEEEETTTCCEEETT
T ss_pred CcEEeCCCCeEECCC
Confidence 468899999997653
No 208
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.88 E-value=8 Score=25.09 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=32.6
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|-.|...|.--. ....-.||.+||..|...+... ...|..|...+
T Consensus 23 ~~~C~IC~~~~~~~~-~~~~l~C~H~fh~~Ci~~w~~~--------~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQ-LLRVLPCNHEFHAKCVDKWLKA--------NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBTC-EEEEETTTEEEETTHHHHHHHH--------CSSCTTTCCCC
T ss_pred CCCCeECCcccCCCC-eEEEECCCCHhHHHHHHHHHHc--------CCcCcCcCCcC
Confidence 456788887775432 2344569999999998777531 24788887655
No 209
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=39.18 E-value=10 Score=23.44 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=11.9
Q ss_pred cccccccccceecCC
Q 022927 20 LQHHCRCCGRTLCHE 34 (290)
Q Consensus 20 rrhhCr~cg~v~C~~ 34 (290)
+++.|+.||.|+=..
T Consensus 2 ~~y~C~vCGyvYd~~ 16 (54)
T 4rxn_A 2 KKYTCTVCGYIYDPE 16 (54)
T ss_dssp CCEEETTTCCEECTT
T ss_pred CceECCCCCeEECCC
Confidence 478999999987653
No 210
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.87 E-value=4.6 Score=25.55 Aligned_cols=49 Identities=12% Similarity=0.213 Sum_probs=32.5
Q ss_pred cccccccCCCCCcc---ccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIRSN---LLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~~~---~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|-.|...|.-- .+.-.-..||.+||..|...+... ...|..|...+
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~ 66 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKI 66 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH--------CSSCTTTCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc--------CCCCCCCCCcc
Confidence 34577887777532 233355689999999998776531 34677776554
No 211
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.76 E-value=12 Score=19.61 Aligned_cols=15 Identities=13% Similarity=0.363 Sum_probs=11.0
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.+.+.|..||+.|-.
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (36)
T 2els_A 7 GKIFTCEYCNKVFKF 21 (36)
T ss_dssp CCCEECTTTCCEESS
T ss_pred CCCEECCCCCceeCC
Confidence 466788888888753
No 212
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.51 E-value=11 Score=24.07 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=20.2
Q ss_pred ccccccccCCCCCccccccccccccce-ecCCC
Q 022927 4 HDLQNLRLISHIRSNLLQHHCRCCGRT-LCHEH 35 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhhCr~cg~v-~C~~c 35 (290)
|...|-+|+..- +...|++|..|... +|..|
T Consensus 10 H~~~Cd~C~~~p-i~G~RykC~~C~d~DLC~~C 41 (63)
T 2e5r_A 10 HPVECSYCHSES-MMGFRYRCQQCHNYQLCQDC 41 (63)
T ss_dssp SCSCCSSSCCCS-SCSCEEEESSCSSCEECHHH
T ss_pred eCCCCcCCCCcc-eecceEEecCCCCchhHHHH
Confidence 337788887642 34677888888543 55555
No 213
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.50 E-value=19 Score=22.89 Aligned_cols=12 Identities=25% Similarity=0.838 Sum_probs=5.8
Q ss_pred ccccccccccee
Q 022927 20 LQHHCRCCGRTL 31 (290)
Q Consensus 20 rrhhCr~cg~v~ 31 (290)
|.+.|..||+.|
T Consensus 17 ~~~~C~~C~~~f 28 (77)
T 2cot_A 17 RRYKCDECGKSF 28 (77)
T ss_dssp CSSBCSSSCCBC
T ss_pred CCEECCCCCccc
Confidence 344555555443
No 214
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=37.77 E-value=2.7 Score=29.61 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=31.4
Q ss_pred ccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 8 NLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 8 ~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
|-.|+.+|....|-- .|..+||.+|..... .+....|..|-+.+.
T Consensus 4 C~~C~~Pi~iygRmI---PCkHvFCydCa~~~~-------~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 4 CDKCGLPIKVYGRMI---PCKHVFCYDCAILHE-------KKGDKMCPGCSDPVQ 48 (101)
T ss_dssp CTTTCSBCSEEEEEE---TTCCEEEHHHHHHHH-------HTTCCBCTTTCCBCS
T ss_pred cCccCCCeEEEeeec---cccccHHHHHHHHHH-------hccCCCCcCcCCeee
Confidence 567999999988865 666799999964432 134556777766554
No 215
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=37.30 E-value=15 Score=21.97 Aligned_cols=10 Identities=0% Similarity=-0.356 Sum_probs=6.3
Q ss_pred cccccCCCCC
Q 022927 7 QNLRLISHIR 16 (290)
Q Consensus 7 ~~~~c~~~f~ 16 (290)
.|-.|++.|.
T Consensus 4 ~C~~C~~~f~ 13 (60)
T 2adr_A 4 VCEVCTRAFA 13 (60)
T ss_dssp CCTTTCCCBS
T ss_pred cCCCCccccC
Confidence 3556777775
No 216
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.15 E-value=8.7 Score=25.33 Aligned_cols=45 Identities=9% Similarity=0.245 Sum_probs=30.5
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.-- . --.||.+||..|...+.. ....|..|...+.
T Consensus 16 ~~C~IC~~~~~~p---~-~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 16 FRCFICRQAFQNP---V-VTKCRHYFCESCALEHFR--------ATPRCYICDQPTG 60 (81)
T ss_dssp SBCSSSCSBCCSE---E-ECTTSCEEEHHHHHHHHH--------HCSBCSSSCCBCC
T ss_pred CCCcCCCchhcCe---e-EccCCCHhHHHHHHHHHH--------CCCcCCCcCcccc
Confidence 4577787776421 1 257999999999876643 2446888876653
No 217
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=37.02 E-value=19 Score=24.35 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=19.4
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCC
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSD 38 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~ 38 (290)
+.+|-.|.. |+ -.-..-||.||+||=..|...
T Consensus 15 D~~C~VC~~-~t-~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 15 DEMCDVCEV-WT-AESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp SCCCTTTCC-CC-SSCCSSCSSSSSCCCHHHHHH
T ss_pred CcccCcccc-cc-ccceeccccccccccHhhccc
Confidence 445666652 22 334567888888877666554
No 218
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=36.97 E-value=11 Score=18.32 Aligned_cols=10 Identities=20% Similarity=0.557 Sum_probs=6.3
Q ss_pred ccccccccee
Q 022927 22 HHCRCCGRTL 31 (290)
Q Consensus 22 hhCr~cg~v~ 31 (290)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1klr_A 3 YQCQYCEFRS 12 (30)
T ss_dssp CCCSSSSCCC
T ss_pred ccCCCCCCcc
Confidence 5566776654
No 219
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=36.70 E-value=20 Score=22.88 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=11.9
Q ss_pred ccccCCCCCcccc-cccccccc
Q 022927 8 NLRLISHIRSNLL-QHHCRCCG 28 (290)
Q Consensus 8 ~~~c~~~f~~~~r-rhhCr~cg 28 (290)
|..|+..|.+-.+ .-.|+.||
T Consensus 24 C~~Cg~~~~l~~~~~iRC~~CG 45 (63)
T 3h0g_L 24 CADCGARNTIQAKEVIRCRECG 45 (63)
T ss_dssp CSSSCCBCCCCSSSCCCCSSSC
T ss_pred CCCCCCeeecCCCCceECCCCC
Confidence 5677777775432 24455554
No 220
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=36.19 E-value=4.8 Score=29.92 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=29.7
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.- -.--.||.+||..|...+.. ....|..|-..+.
T Consensus 54 ~~C~iC~~~~~~----~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 54 LQCIICSEYFIE----AVTLNCAHSFCSYCINEWMK--------RKIECPICRKDIK 98 (138)
T ss_dssp SBCTTTCSBCSS----EEEETTSCEEEHHHHHHHTT--------TCSBCTTTCCBCC
T ss_pred CCCcccCcccCC----ceECCCCCCccHHHHHHHHH--------cCCcCCCCCCcCC
Confidence 357888777742 12236999999999765532 2345888876553
No 221
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=36.07 E-value=3.3 Score=30.14 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=34.5
Q ss_pred CCcccccccccCCCCCcc---ccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 1 MTHHDLQNLRLISHIRSN---LLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 1 ~~~~~~~~~~c~~~f~~~---~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
|......|-.|...|.-- .+.-.--.||.+||..|...+.. ..+.|..|...+.
T Consensus 3 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 3 MGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--------NANTCPTCRKKIN 59 (133)
T ss_dssp --CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT--------TCSBCTTTCCBCT
T ss_pred cCCCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH--------hCCCCCCCCCcCc
Confidence 344566788888877532 12224568999999999877643 1237888876664
No 222
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=36.02 E-value=4.2 Score=30.89 Aligned_cols=46 Identities=11% Similarity=0.230 Sum_probs=30.4
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.-- .- -.||.+||..|...+.. .....|..|...+.
T Consensus 79 ~~C~IC~~~~~~p---v~-~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 79 FMCVCCQELVYQP---VT-TECFHNVCKDCLQRSFK-------AQVFSCPACRHDLG 124 (150)
T ss_dssp TBCTTTSSBCSSE---EE-CTTSCEEEHHHHHHHHH-------TTCCBCTTTCCBCC
T ss_pred CEeecCChhhcCC---EE-cCCCCchhHHHHHHHHH-------hCCCcCCCCCccCC
Confidence 3577777766421 11 48999999999876653 12346888877664
No 223
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.76 E-value=13 Score=19.33 Aligned_cols=14 Identities=29% Similarity=0.667 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.+.+.|..||+.|-
T Consensus 7 ~~~~~C~~C~k~f~ 20 (36)
T 2elr_A 7 GKTHLCDMCGKKFK 20 (36)
T ss_dssp CSSCBCTTTCCBCS
T ss_pred CCCeecCcCCCCcC
Confidence 46678888887653
No 224
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.54 E-value=16 Score=22.68 Aligned_cols=12 Identities=17% Similarity=0.481 Sum_probs=5.9
Q ss_pred ccccccccccee
Q 022927 20 LQHHCRCCGRTL 31 (290)
Q Consensus 20 rrhhCr~cg~v~ 31 (290)
|.+.|..||+.|
T Consensus 8 ~~~~C~~C~k~f 19 (70)
T 1x5w_A 8 HPEKCSECSYSC 19 (70)
T ss_dssp CSEECSSSSCEE
T ss_pred CCeECCCCCccc
Confidence 344555555544
No 225
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=34.93 E-value=15 Score=18.84 Aligned_cols=14 Identities=14% Similarity=0.285 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 5 ~k~~~C~~C~k~f~ 18 (35)
T 2elx_A 5 SSGYVCALCLKKFV 18 (35)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeECCCCcchhC
Confidence 35677888887764
No 226
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=34.34 E-value=13 Score=18.10 Aligned_cols=10 Identities=30% Similarity=0.839 Sum_probs=6.3
Q ss_pred ccccccccee
Q 022927 22 HHCRCCGRTL 31 (290)
Q Consensus 22 hhCr~cg~v~ 31 (290)
+.|..||+.|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1paa_A 3 YACGLCNRAF 12 (30)
T ss_dssp SBCTTTCCBC
T ss_pred cCCcccCccc
Confidence 5566676655
No 227
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=34.20 E-value=5.9 Score=25.26 Aligned_cols=50 Identities=14% Similarity=0.260 Sum_probs=33.8
Q ss_pred cccccccCCCCCcc---ccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSN---LLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~---~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|.-- .+.-.-..||.+||..|...+.. ....|..|...+.
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--------NANTCPTCRKKIN 62 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--------HCSBCTTTCCBCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--------cCCCCCCCCCccC
Confidence 45677787777532 22335668999999999877653 1247888877664
No 228
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.18 E-value=17 Score=24.85 Aligned_cols=8 Identities=0% Similarity=-0.542 Sum_probs=4.4
Q ss_pred ccccCCCC
Q 022927 8 NLRLISHI 15 (290)
Q Consensus 8 ~~~c~~~f 15 (290)
|-.|++.|
T Consensus 37 C~~C~k~F 44 (96)
T 2ctd_A 37 CPTCQAVG 44 (96)
T ss_dssp CTTTCSCE
T ss_pred CCCCCCCc
Confidence 44555555
No 229
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.73 E-value=13 Score=23.34 Aligned_cols=12 Identities=25% Similarity=0.667 Sum_probs=6.1
Q ss_pred ccccccccccee
Q 022927 20 LQHHCRCCGRTL 31 (290)
Q Consensus 20 rrhhCr~cg~v~ 31 (290)
+.+.|..||+.|
T Consensus 13 k~~~C~~C~k~f 24 (72)
T 1x6e_A 13 KPYGCVECGKAF 24 (72)
T ss_dssp CCEECSSSCCEE
T ss_pred CCccCCCCCCcc
Confidence 444555555544
No 230
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=32.87 E-value=7.9 Score=26.47 Aligned_cols=20 Identities=15% Similarity=0.129 Sum_probs=15.2
Q ss_pred CcccccccccCCCCCcccccc
Q 022927 2 THHDLQNLRLISHIRSNLLQH 22 (290)
Q Consensus 2 ~~~~~~~~~c~~~f~~~~rrh 22 (290)
+.+-..|+.|+++|..+. ||
T Consensus 18 ~~d~iiClecGK~fK~Lk-RH 37 (87)
T 2jsp_A 18 QDDHIVCLECGGSFKSLK-RH 37 (87)
T ss_dssp CSSCEECTBTCCEESBHH-HH
T ss_pred CCCceEecccchhhHHHH-HH
Confidence 345567999999999887 55
No 231
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.82 E-value=13 Score=19.45 Aligned_cols=14 Identities=14% Similarity=0.448 Sum_probs=10.4
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (37)
T 2elo_A 7 GRSYSCPVCEKSFS 20 (37)
T ss_dssp CCCCEETTTTEECS
T ss_pred CCCcCCCCCCCccC
Confidence 46678888888764
No 232
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=32.54 E-value=6.2 Score=35.07 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=32.6
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSR 63 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~ 63 (290)
..|-.|...|. .-..-.||.+||..|...+.. ...+.|..|...+..
T Consensus 333 ~~C~ICle~~~----~pv~lpCGH~FC~~Ci~~wl~-------~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 333 QLCKICAENDK----DVKIEPCGHLMCTSCLTSWQE-------SEGQGCPFCRCEIKG 379 (389)
T ss_dssp SBCTTTSSSBC----CEEEETTCCEECHHHHHHHHH-------HTCSBCTTTCCBCCE
T ss_pred CCCCccCcCCC----CeEEeCCCChhhHHHHHHHHh-------cCCCCCCCCCCccCC
Confidence 46788877663 334578999999999865532 134678888776643
No 233
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.44 E-value=9.6 Score=18.63 Aligned_cols=13 Identities=23% Similarity=0.830 Sum_probs=7.7
Q ss_pred ccccccccceecC
Q 022927 21 QHHCRCCGRTLCH 33 (290)
Q Consensus 21 rhhCr~cg~v~C~ 33 (290)
.+.|..||+.|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2lvt_A 2 PCQCVMCGKAFTQ 14 (29)
Confidence 3557777766543
No 234
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.14 E-value=17 Score=18.83 Aligned_cols=14 Identities=29% Similarity=0.522 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+-|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 7 GLLYDCHICERKFK 20 (36)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCccC
Confidence 45677888887764
No 235
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=31.54 E-value=18 Score=26.15 Aligned_cols=13 Identities=15% Similarity=0.651 Sum_probs=8.9
Q ss_pred cccccccccccee
Q 022927 19 LLQHHCRCCGRTL 31 (290)
Q Consensus 19 ~rrhhCr~cg~v~ 31 (290)
.-+..|+.||..|
T Consensus 71 p~~~~C~~CG~~~ 83 (119)
T 2kdx_A 71 KVELECKDCSHVF 83 (119)
T ss_dssp CCEEECSSSSCEE
T ss_pred cceEEcCCCCCEE
Confidence 3467788888764
No 236
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=31.37 E-value=18 Score=18.52 Aligned_cols=15 Identities=20% Similarity=0.383 Sum_probs=10.3
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+-|..||+.|-.
T Consensus 5 ~k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 5 KRPFVCRICLSAFTT 19 (35)
T ss_dssp CSCEECSSSCCEESS
T ss_pred CcCeeCCCCCcccCC
Confidence 356778888877643
No 237
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.35 E-value=18 Score=18.64 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.+.+.|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2elt_A 7 GKPYKCPQCSYASA 20 (36)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCCCCCCCCcccC
Confidence 45677888887764
No 238
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=30.92 E-value=5.6 Score=30.49 Aligned_cols=45 Identities=9% Similarity=0.245 Sum_probs=31.0
Q ss_pred cccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 7 QNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 7 ~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
.|-.|...|. ...-...||.+||..|...+.. .....|..|...+
T Consensus 56 ~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 56 MCPICLDMLK---NTMTTKECLHRFCADCIITALR-------SGNKECPTCRKKL 100 (165)
T ss_dssp BCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHH-------TTCCBCTTTCCBC
T ss_pred CCcccChHhh---CcCEeCCCCChhHHHHHHHHHH-------hCcCCCCCCCCcC
Confidence 5677766655 3344458999999999877754 1245688887665
No 239
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=30.71 E-value=25 Score=22.04 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=32.1
Q ss_pred ccccCC-CCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhh
Q 022927 8 NLRLIS-HIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNS 60 (290)
Q Consensus 8 ~~~c~~-~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~ 60 (290)
|-.|.+ +|.= .==|.|-.|-.-||..|..+. .|. .++-.-||..|.+.
T Consensus 12 C~iC~KTKFAD-G~Gh~C~yCk~r~CaRCGg~v-~lr---~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 12 CGICHKTKFAD-GCGHNCSYCQTKFCARCGGRV-SLR---SNKVMWVCNLCRKQ 60 (62)
T ss_dssp CSSSSCSCCCS-SCCEEBTTTCCEECTTSEEEE-ESS---TTCEEEEEHHHHHH
T ss_pred hhhhccceecc-CCCccccccCCeeecccCCEe-eec---CCeEEEEehhhhhc
Confidence 556643 3432 224789999999999997654 322 25677799988754
No 240
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=30.55 E-value=7 Score=27.53 Aligned_cols=47 Identities=11% Similarity=0.084 Sum_probs=31.1
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
...|-.|...|. ...-.-.||.+||..|...+... ...|..|...+.
T Consensus 15 ~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 15 HLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLET--------SKYCPICDVQVH 61 (108)
T ss_dssp GTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTS--------CSBCTTTCCBSC
T ss_pred cCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHh--------CCcCcCCCcccc
Confidence 345677766654 33334589999999998666431 267888877664
No 241
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=30.52 E-value=15 Score=25.39 Aligned_cols=9 Identities=22% Similarity=0.630 Sum_probs=4.3
Q ss_pred cccccccch
Q 022927 50 NVRVCADCF 58 (290)
Q Consensus 50 ~~rvC~~C~ 58 (290)
|..-|..|-
T Consensus 64 P~~~C~~Cg 72 (92)
T 2kwq_A 64 PKKHCSTCG 72 (92)
T ss_dssp CCSCCTTTC
T ss_pred CCCCCCCCC
Confidence 444455553
No 242
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=30.48 E-value=14 Score=31.78 Aligned_cols=44 Identities=14% Similarity=0.347 Sum_probs=26.3
Q ss_pred cccccccccc------eecCCCCCCcccccCCCC----------CCcccccccchhhhccc
Q 022927 20 LQHHCRCCGR------TLCHEHSSDQMTLPQFGI----------HTNVRVCADCFNSSSRT 64 (290)
Q Consensus 20 rrhhCr~cg~------v~C~~c~~~~~~~~~~~~----------~~~~rvC~~C~~~~~~~ 64 (290)
|..||-.||. +-|..|-+.+ .+..+.+ ...+-+|+.|...++..
T Consensus 207 R~l~Cs~C~t~W~~~R~~C~~Cg~~~-~l~y~~~e~~~~~~~~~~~r~e~C~~C~~YlK~~ 266 (309)
T 2fiy_A 207 RYLSCSLCACEWHYVRIKCSHCEESK-HLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQF 266 (309)
T ss_dssp EEEEETTTCCEEECCTTSCSSSCCCS-CCEEECCCC-CCCSTTCSEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCEEeecCcCCcCCCCCC-CeeEEEecCccccCCCcceEEEEcccccchHhhh
Confidence 5567777774 3677776643 2222221 12355899999888644
No 243
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=29.88 E-value=31 Score=24.72 Aligned_cols=13 Identities=31% Similarity=0.882 Sum_probs=10.2
Q ss_pred CCcccccccchhh
Q 022927 48 HTNVRVCADCFNS 60 (290)
Q Consensus 48 ~~~~rvC~~C~~~ 60 (290)
.-.++||+.|...
T Consensus 23 ~F~~~VC~~Cr~~ 35 (111)
T 1d4u_A 23 HFDLPTCDDCRDA 35 (111)
T ss_dssp TTSCCCCTTTCSS
T ss_pred hCCeeechhhccc
Confidence 4578999999764
No 244
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.87 E-value=20 Score=18.71 Aligned_cols=15 Identities=13% Similarity=0.241 Sum_probs=10.4
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 7 GRAMKCPYCDFYFMK 21 (37)
T ss_dssp CCCEECSSSSCEECS
T ss_pred CCCeECCCCChhhcc
Confidence 456778888887643
No 245
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.78 E-value=20 Score=18.54 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+-|..||+.|-
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2elq_A 7 GKPFKCSLCEYATR 20 (36)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCccCCCCCchhC
Confidence 35677888887764
No 246
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=29.61 E-value=15 Score=19.82 Aligned_cols=10 Identities=40% Similarity=1.331 Sum_probs=7.2
Q ss_pred cccccccccc
Q 022927 20 LQHHCRCCGR 29 (290)
Q Consensus 20 rrhhCr~cg~ 29 (290)
=+-|||.|-+
T Consensus 8 ikqhcrfckk 17 (37)
T 2elu_A 8 IKQHCRFCKK 17 (37)
T ss_dssp CCCEETTTTE
T ss_pred HHHHHHHHHH
Confidence 4678988865
No 247
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=29.30 E-value=16 Score=21.38 Aligned_cols=15 Identities=0% Similarity=-0.117 Sum_probs=8.7
Q ss_pred cccccCCCCCccccc
Q 022927 7 QNLRLISHIRSNLLQ 21 (290)
Q Consensus 7 ~~~~c~~~f~~~~rr 21 (290)
.|..|+..-|-.-|+
T Consensus 3 ~C~~C~tt~Tp~WR~ 17 (43)
T 2vut_I 3 TCTNCFTQTTPLWRR 17 (43)
T ss_dssp CCSSSCCCCCSCCEE
T ss_pred cCCccCCCCCCcccc
Confidence 466666666644444
No 248
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=29.19 E-value=8.7 Score=23.72 Aligned_cols=49 Identities=12% Similarity=0.219 Sum_probs=32.1
Q ss_pred ccccccCCCCCcc---ccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSN---LLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~---~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|.-- .+.-.-..||.+||..|...+... ...|..|...+.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKIN 55 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH--------CSBCTTTCCBCT
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc--------CCCCCCCCccCC
Confidence 4567777776532 233356689999999998766531 347887866553
No 249
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=28.99 E-value=23 Score=23.43 Aligned_cols=10 Identities=0% Similarity=-0.379 Sum_probs=7.3
Q ss_pred cccccCCCCC
Q 022927 7 QNLRLISHIR 16 (290)
Q Consensus 7 ~~~~c~~~f~ 16 (290)
.|-.|++.|.
T Consensus 10 ~C~~C~~~f~ 19 (96)
T 2dmd_A 10 KCEVCGKCFS 19 (96)
T ss_dssp CBTTTTBCCC
T ss_pred ECCCCCCccC
Confidence 4677888886
No 250
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=28.94 E-value=13 Score=18.89 Aligned_cols=11 Identities=18% Similarity=0.718 Sum_probs=6.2
Q ss_pred cccccccceec
Q 022927 22 HHCRCCGRTLC 32 (290)
Q Consensus 22 hhCr~cg~v~C 32 (290)
+.|..||+.|-
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 45666665543
No 251
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.73 E-value=8.4 Score=24.14 Aligned_cols=50 Identities=20% Similarity=0.328 Sum_probs=29.1
Q ss_pred ccccccCC-CCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLIS-HIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~-~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|.. .|.--.++..=-.||.+||..|...+.. .....|..|-..+.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-------RGAGNCPECGTPLR 54 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-------TTSSSCTTTCCCCS
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-------cCCCcCCCCCCccc
Confidence 34666655 4432222112347999999999876532 12346878876653
No 252
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=28.32 E-value=31 Score=22.14 Aligned_cols=48 Identities=19% Similarity=0.428 Sum_probs=30.8
Q ss_pred cccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 5 DLQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 5 ~~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
...|-.|...|. ....-..||.+||..|...+... ...+.|..|...+
T Consensus 15 ~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~------~~~~~CP~Cr~~~ 62 (74)
T 2yur_A 15 ELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLE------SDEHTCPTCHQND 62 (74)
T ss_dssp GGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHH------SSSSCCSSSCCSS
T ss_pred CCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHh------cCCCcCCCCCCcC
Confidence 345777766664 23333349999999998776542 1245788887643
No 253
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=28.25 E-value=20 Score=21.20 Aligned_cols=16 Identities=0% Similarity=-0.213 Sum_probs=9.9
Q ss_pred ccccccCCCCCccccc
Q 022927 6 LQNLRLISHIRSNLLQ 21 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rr 21 (290)
..|..|+..-+-.-||
T Consensus 5 ~~C~~C~tt~Tp~WR~ 20 (46)
T 1gnf_A 5 RECVNCGATATPLWRR 20 (46)
T ss_dssp CCCTTTCCCCCSSCBC
T ss_pred CCCCCcCCCCCCcCcc
Confidence 4566777776655555
No 254
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=27.86 E-value=19 Score=25.39 Aligned_cols=54 Identities=6% Similarity=0.027 Sum_probs=35.1
Q ss_pred ccccccCCCCCccc--------------cccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNL--------------LQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~--------------rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-+|...|..-. +.-.--.||.+||..|...+..... ......|..|...+.
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~---~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN---KDGSLQCPSCKTIYG 93 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC---CSSCCBCTTTCCBSS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc---CCCCCcCCCCCCccC
Confidence 46888888875321 1111457999999999988763221 134568999977664
No 255
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=27.56 E-value=19 Score=18.43 Aligned_cols=11 Identities=18% Similarity=0.685 Sum_probs=6.3
Q ss_pred cccccccccee
Q 022927 21 QHHCRCCGRTL 31 (290)
Q Consensus 21 rhhCr~cg~v~ 31 (290)
.+.|..||+.|
T Consensus 2 p~~C~~C~k~F 12 (33)
T 1rim_A 2 KFACPECPKRF 12 (33)
T ss_dssp CCCCSSSCCCC
T ss_pred cccCCCCCchh
Confidence 35566666654
No 256
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=27.47 E-value=22 Score=20.31 Aligned_cols=15 Identities=20% Similarity=0.441 Sum_probs=11.0
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 5 ~kp~~C~~C~k~F~~ 19 (48)
T 3iuf_A 5 DKPYACDICGKRYKN 19 (48)
T ss_dssp TSCEECTTTCCEESS
T ss_pred CcCEECCCcCcccCC
Confidence 466788888887754
No 257
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=26.88 E-value=25 Score=22.55 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=15.4
Q ss_pred ccccCCCCCccccccccccc-cceecCCCC
Q 022927 8 NLRLISHIRSNLLQHHCRCC-GRTLCHEHS 36 (290)
Q Consensus 8 ~~~c~~~f~~~~rrhhCr~c-g~v~C~~c~ 36 (290)
|.+|+..=+ ..|.-| |.+||..|-
T Consensus 11 C~ICneDAt-----lrC~gCdgDLYC~rC~ 35 (67)
T 2d8v_A 11 CCICNEDAT-----LRCAGCDGDLYCARCF 35 (67)
T ss_dssp CTTTCSCCC-----EEETTTTSEEECSSHH
T ss_pred eEEeCCCCe-----EEecCCCCceehHHHH
Confidence 566666522 457777 778887773
No 258
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=26.77 E-value=46 Score=18.78 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=14.8
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 022927 195 GLRDAIKNGDAAAVKKLL 212 (290)
Q Consensus 195 ~Lh~A~~~g~~~~v~~Ll 212 (290)
.+..|+..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 477889999999988774
No 259
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=26.67 E-value=34 Score=22.40 Aligned_cols=9 Identities=44% Similarity=1.475 Sum_probs=4.0
Q ss_pred cccccccee
Q 022927 23 HCRCCGRTL 31 (290)
Q Consensus 23 hCr~cg~v~ 31 (290)
||+.||..|
T Consensus 46 ~C~~C~~~~ 54 (72)
T 3jyw_9 46 TCSCCKKTV 54 (72)
T ss_dssp CCSSSCCCC
T ss_pred ECCCCCCEE
Confidence 444444433
No 260
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=26.65 E-value=20 Score=16.82 Aligned_cols=10 Identities=30% Similarity=0.876 Sum_probs=5.5
Q ss_pred ccccccccee
Q 022927 22 HHCRCCGRTL 31 (290)
Q Consensus 22 hhCr~cg~v~ 31 (290)
+.|..||+.|
T Consensus 2 ~~C~~C~k~f 11 (27)
T 1znf_A 2 YKCGLCERSF 11 (27)
T ss_dssp CBCSSSCCBC
T ss_pred ccCCCCCCcC
Confidence 3466666554
No 261
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=26.61 E-value=23 Score=18.43 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.+.+-|..||+.|-
T Consensus 9 ~k~~~C~~C~k~f~ 22 (37)
T 1p7a_A 9 IKPFQCPDCDRSFS 22 (37)
T ss_dssp SSSBCCTTTCCCBS
T ss_pred CCCccCCCCCcccC
Confidence 45677888887664
No 262
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=26.51 E-value=34 Score=24.20 Aligned_cols=31 Identities=16% Similarity=0.181 Sum_probs=18.4
Q ss_pred cccccCCCC-CccccccccccccceecCCCCCCcccccCC
Q 022927 7 QNLRLISHI-RSNLLQHHCRCCGRTLCHEHSSDQMTLPQF 45 (290)
Q Consensus 7 ~~~~c~~~f-~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~ 45 (290)
.|..|+-.| .-+.+... |..|-+.++..|.|
T Consensus 69 ~C~~CG~~F~~~~~kPsr--------CP~CkSe~Ie~P~F 100 (105)
T 2gmg_A 69 QCRKCGFVFKAEINIPSR--------CPKCKSEWIEEPRF 100 (105)
T ss_dssp BBTTTCCBCCCCSSCCSS--------CSSSCCCCBCCCCE
T ss_pred ChhhCcCeecccCCCCCC--------CcCCCCCccCCcce
Confidence 588999998 23344444 44555555554543
No 263
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=26.14 E-value=22 Score=22.02 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=9.1
Q ss_pred ccccCCCCCcccccccccccc
Q 022927 8 NLRLISHIRSNLLQHHCRCCG 28 (290)
Q Consensus 8 ~~~c~~~f~~~~rrhhCr~cg 28 (290)
|+.|..... -|-..||.||
T Consensus 22 CrkC~ARnp--~~A~~CRKCg 40 (56)
T 2ayj_A 22 CRKCGALNP--IRATKCRRCH 40 (56)
T ss_dssp ETTTCCEEC--TTCSSCTTTC
T ss_pred hccccCcCC--cccccccCCC
Confidence 444444332 2455566665
No 264
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=31.80 E-value=14 Score=17.92 Aligned_cols=13 Identities=23% Similarity=0.552 Sum_probs=8.1
Q ss_pred ccccccccceecC
Q 022927 21 QHHCRCCGRTLCH 33 (290)
Q Consensus 21 rhhCr~cg~v~C~ 33 (290)
.+.|..||+.|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (30)
T 2lvr_A 3 PYVCIHCQRQFAD 15 (30)
Confidence 4567777776543
No 265
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.81 E-value=30 Score=23.58 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=15.9
Q ss_pred cccccCCCCCccc----------cccccccccceec
Q 022927 7 QNLRLISHIRSNL----------LQHHCRCCGRTLC 32 (290)
Q Consensus 7 ~~~~c~~~f~~~~----------rrhhCr~cg~v~C 32 (290)
.|-.|++.|.... +.+.|..||+.|-
T Consensus 18 ~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~ 53 (107)
T 1wjp_A 18 QCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFF 53 (107)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBS
T ss_pred ECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccC
Confidence 4677888886332 2345666666553
No 266
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.13 E-value=26 Score=18.41 Aligned_cols=15 Identities=13% Similarity=0.067 Sum_probs=10.5
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (37)
T 2elm_A 7 GHLYYCSQCHYSSIT 21 (37)
T ss_dssp SCEEECSSSSCEEEC
T ss_pred CcCeECCCCCcccCC
Confidence 456778888887643
No 267
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.06 E-value=38 Score=23.26 Aligned_cols=10 Identities=30% Similarity=0.368 Sum_probs=5.6
Q ss_pred cccccchhhh
Q 022927 52 RVCADCFNSS 61 (290)
Q Consensus 52 rvC~~C~~~~ 61 (290)
-.|..|-...
T Consensus 81 ~~C~~C~k~f 90 (115)
T 2dmi_A 81 LKCMYCGHSF 90 (115)
T ss_dssp CBCSSSCCBC
T ss_pred eECCCCCCcc
Confidence 3577775443
No 268
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=24.91 E-value=34 Score=24.31 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=16.9
Q ss_pred cccccCCCCCccccccccccccceecCCC
Q 022927 7 QNLRLISHIRSNLLQHHCRCCGRTLCHEH 35 (290)
Q Consensus 7 ~~~~c~~~f~~~~rrhhCr~cg~v~C~~c 35 (290)
.|-.|...=+++ -|-.||.|.|+.=
T Consensus 26 ~C~~C~~~~~~W----~CL~CG~vgCgr~ 50 (109)
T 3c5k_A 26 PCGDCGTIQENW----VCLSCYQVYCGRY 50 (109)
T ss_dssp CCTTTCCCSSEE----EETTTCCEEECTT
T ss_pred cCccccCCCCee----eeeecCccccCCC
Confidence 366666554433 3999999999743
No 269
>1j0t_A MIH, MOLT-inhibiting hormone; alpha-helical protein, hormone/growth factor complex; NMR {Marsupenaeus japonicus} SCOP: a.163.1.1
Probab=24.89 E-value=11 Score=25.18 Aligned_cols=14 Identities=50% Similarity=0.807 Sum_probs=11.6
Q ss_pred Ccccccccchhhhc
Q 022927 49 TNVRVCADCFNSSS 62 (290)
Q Consensus 49 ~~~rvC~~C~~~~~ 62 (290)
+-.|||++||+...
T Consensus 20 kldrVCdDCyNLyR 33 (78)
T 1j0t_A 20 KVVRVCEDCTNIFR 33 (78)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 55799999999874
No 270
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.69 E-value=28 Score=19.16 Aligned_cols=15 Identities=20% Similarity=0.521 Sum_probs=10.7
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (44)
T 2epv_A 10 EKPYECNECGKAFIW 24 (44)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCeECCCCCcccCc
Confidence 466788888887643
No 271
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=24.68 E-value=19 Score=20.07 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=12.8
Q ss_pred cccccCCCCCccccc-----cccccccc
Q 022927 7 QNLRLISHIRSNLLQ-----HHCRCCGR 29 (290)
Q Consensus 7 ~~~~c~~~f~~~~rr-----hhCr~cg~ 29 (290)
.|..|+.+-|-+.++ ..|..||.
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~ 29 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGA 29 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCC
Confidence 466777776644442 23666654
No 272
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=24.47 E-value=20 Score=25.83 Aligned_cols=12 Identities=17% Similarity=0.589 Sum_probs=7.6
Q ss_pred cccccccceecC
Q 022927 22 HHCRCCGRTLCH 33 (290)
Q Consensus 22 hhCr~cg~v~C~ 33 (290)
.||+.||.+|-+
T Consensus 79 W~C~~Cgk~fAG 90 (116)
T 3cc2_Z 79 WQCSYCDYKFTG 90 (116)
T ss_dssp EEETTTCCEEEC
T ss_pred EECCCCCCEEEC
Confidence 566666666654
No 273
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=24.25 E-value=29 Score=18.41 Aligned_cols=15 Identities=20% Similarity=0.408 Sum_probs=9.9
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.+.+-|..||+.|-.
T Consensus 4 ~k~~~C~~C~k~f~~ 18 (39)
T 1njq_A 4 PRSYTCSFCKREFRS 18 (39)
T ss_dssp SSSEECTTTCCEESS
T ss_pred CCceECCCCCcccCC
Confidence 355678888877643
No 274
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=24.04 E-value=85 Score=19.71 Aligned_cols=35 Identities=20% Similarity=0.497 Sum_probs=22.0
Q ss_pred cccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhcccCC
Q 022927 18 NLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSSRTGK 66 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~~~~~ 66 (290)
.+-+..|+.||+ .+ |+...-.+|..||-.+...+.
T Consensus 18 ~r~~nRC~~~GR--------~r------g~iRkfglcR~~FRe~A~~g~ 52 (61)
T 2vqe_N 18 VRAYTRCVRCGR--------AR------SVYRFFGLCRICLRELAHKGQ 52 (61)
T ss_dssp GGCCCCCTTTCC--------CT------TCCTTTSSCHHHHHHHHHHTC
T ss_pred CCCceeeecCCC--------Cc------eeeccCceeHHHHHHHHhCCc
Confidence 444666888875 12 334455589999988755443
No 275
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.03 E-value=31 Score=23.29 Aligned_cols=10 Identities=40% Similarity=1.129 Sum_probs=5.2
Q ss_pred ccccccceec
Q 022927 23 HCRCCGRTLC 32 (290)
Q Consensus 23 hCr~cg~v~C 32 (290)
||+.||..|=
T Consensus 55 ~C~kCg~~~A 64 (83)
T 3j21_i 55 QCQKCGATFA 64 (83)
T ss_dssp EETTTCCEEE
T ss_pred EcCCCCCEEe
Confidence 5555555543
No 276
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=23.71 E-value=9.4 Score=24.86 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=26.6
Q ss_pred ccccccCCCCCccccccccccccce-ecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRT-LCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v-~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|..|...|.- ----.||.. ||..|...+ +.|..|...+.
T Consensus 25 ~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~------------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMDRNIA----IVFVPCGHLVTCKQCAEAV------------DKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSSSBCC----EEEETTCCBCCCHHHHTTC------------SBCTTTCCBCS
T ss_pred CCCCCCCCCCCC----EEEcCCCChhHHHHhhhcC------------ccCCCcCcCcc
Confidence 456777666542 122479999 999996543 66777766553
No 277
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=23.33 E-value=27 Score=16.61 Aligned_cols=12 Identities=33% Similarity=0.808 Sum_probs=7.3
Q ss_pred ccccc--cccceec
Q 022927 21 QHHCR--CCGRTLC 32 (290)
Q Consensus 21 rhhCr--~cg~v~C 32 (290)
.+.|. .||+.|-
T Consensus 2 ~~~C~~~~C~k~f~ 15 (29)
T 2ab3_A 2 VYVCHFENCGRSFN 15 (29)
T ss_dssp CEEECSTTTCEEES
T ss_pred CCCCcCCcCcCccC
Confidence 35566 7776653
No 278
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.17 E-value=31 Score=19.10 Aligned_cols=15 Identities=20% Similarity=0.583 Sum_probs=11.1
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~~~~~C~~C~k~F~~ 24 (46)
T 2emi_A 10 ERHYECSECGKAFIQ 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCCCCCCCCcccCC
Confidence 466788888887754
No 279
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=22.51 E-value=33 Score=18.40 Aligned_cols=15 Identities=20% Similarity=0.550 Sum_probs=10.7
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 9 ~~~~~C~~C~k~f~~ 23 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQ 23 (42)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CCCeECCCCCcccCC
Confidence 466778888887643
No 280
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=22.51 E-value=21 Score=25.46 Aligned_cols=45 Identities=11% Similarity=0.149 Sum_probs=27.9
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhh
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSS 61 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~ 61 (290)
..|-.|...|.- -.- -.||.+||..|...+.... ...|..|-..+
T Consensus 19 ~~C~IC~~~~~~---p~~-~~CgH~fC~~Ci~~~~~~~-------~~~CP~Cr~~~ 63 (118)
T 3hct_A 19 YECPICLMALRE---AVQ-TPCGHRFCKACIIKSIRDA-------GHKCPVDNEIL 63 (118)
T ss_dssp GBCTTTCSBCSS---EEE-CTTSCEEEHHHHHHHHHHH-------CSBCTTTCCBC
T ss_pred CCCCcCChhhcC---eEE-CCcCChhhHHHHHHHHhhC-------CCCCCCCCCCc
Confidence 456677766652 222 3699999999986654311 12677776554
No 281
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.48 E-value=32 Score=19.04 Aligned_cols=15 Identities=20% Similarity=0.605 Sum_probs=10.7
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2ytp_A 10 ERHYECSECGKAFAR 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCcCCcccCC
Confidence 466788888877643
No 282
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.29 E-value=32 Score=18.94 Aligned_cols=15 Identities=20% Similarity=0.501 Sum_probs=10.9
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eow_A 10 EKPYKCNECGKAFRA 24 (46)
T ss_dssp CCCEECTTSCCEESS
T ss_pred CCCeeccccCChhcC
Confidence 466788888887654
No 283
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.12 E-value=33 Score=18.31 Aligned_cols=14 Identities=21% Similarity=0.596 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.+.+.|..||+.|-
T Consensus 8 ~k~~~C~~C~k~f~ 21 (41)
T 2ept_A 8 QRVYECQECGKSFR 21 (41)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCCcC
Confidence 45677888887764
No 284
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.95 E-value=31 Score=18.82 Aligned_cols=14 Identities=14% Similarity=0.294 Sum_probs=9.7
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 8 ~k~~~C~~C~k~f~ 21 (43)
T 2yrm_A 8 NGAFFCNECDCRFS 21 (43)
T ss_dssp SCCBCCSSSCCCBS
T ss_pred CCCEECCCCCCeeC
Confidence 45677888887653
No 285
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=21.92 E-value=28 Score=19.06 Aligned_cols=15 Identities=20% Similarity=0.467 Sum_probs=11.2
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 6 ekp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 6 PARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCCEETTTTEECSC
T ss_pred ccCeECCCCCCccCC
Confidence 567888889887643
No 286
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=21.81 E-value=29 Score=22.69 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=6.6
Q ss_pred Ccccccccchhhhc
Q 022927 49 TNVRVCADCFNSSS 62 (290)
Q Consensus 49 ~~~rvC~~C~~~~~ 62 (290)
..-+.|. |-..++
T Consensus 19 ~kT~~C~-CG~~~~ 31 (71)
T 1gh9_A 19 AKTRKCV-CGRTVN 31 (71)
T ss_dssp CSEEEET-TTEEEE
T ss_pred CcEEECC-CCCeee
Confidence 3445554 555554
No 287
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.79 E-value=31 Score=19.05 Aligned_cols=15 Identities=20% Similarity=0.569 Sum_probs=10.6
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2enf_A 10 EKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCSCBCSSSCCBCSS
T ss_pred CcCeECCCCCcccCC
Confidence 566788888876643
No 288
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=21.73 E-value=27 Score=23.02 Aligned_cols=51 Identities=14% Similarity=0.335 Sum_probs=33.2
Q ss_pred ccccccccCCCCCccccccc-cccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 4 HDLQNLRLISHIRSNLLQHH-CRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 4 ~~~~~~~c~~~f~~~~rrhh-Cr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
....|-.|-..|++-..+.. | .||..||..|...... .....|..|-..+.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~-------~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT-------DENGLCPACRKPYP 61 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT-------SSCSBCTTTCCBCS
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh-------cCCCCCCCCCCccC
Confidence 34567888888865433322 3 6999999999754321 13457888877664
No 289
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.70 E-value=31 Score=19.10 Aligned_cols=16 Identities=19% Similarity=0.555 Sum_probs=11.3
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~F~~ 24 (46)
T 2enh_A 9 GEKPYECDVCRKAFSH 24 (46)
T ss_dssp CSSSCBCTTTCCBCSS
T ss_pred CCCCcCCCCcCchhCC
Confidence 3466788888887654
No 290
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.58 E-value=38 Score=22.84 Aligned_cols=10 Identities=10% Similarity=-0.277 Sum_probs=7.1
Q ss_pred cccccCCCCC
Q 022927 7 QNLRLISHIR 16 (290)
Q Consensus 7 ~~~~c~~~f~ 16 (290)
.|-.|+..|.
T Consensus 19 ~C~~C~~~f~ 28 (106)
T 2ee8_A 19 ICKFCGRHFT 28 (106)
T ss_dssp BCSSSCCBCS
T ss_pred ECCCCCCccC
Confidence 4667888885
No 291
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.54 E-value=30 Score=19.50 Aligned_cols=16 Identities=25% Similarity=0.569 Sum_probs=12.0
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~f~~ 24 (48)
T 2epr_A 9 TRKQVACEICGKIFRD 24 (48)
T ss_dssp CCCSEEETTTTEEESS
T ss_pred CCcCeeCCCCCcccCC
Confidence 3567889999988754
No 292
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=21.53 E-value=22 Score=22.99 Aligned_cols=14 Identities=21% Similarity=0.759 Sum_probs=10.5
Q ss_pred cccccccchhhhcc
Q 022927 50 NVRVCADCFNSSSR 63 (290)
Q Consensus 50 ~~rvC~~C~~~~~~ 63 (290)
.+-+|+.|......
T Consensus 39 gvyICdeCI~~c~~ 52 (67)
T 1ovx_A 39 SVYICDECVDLCND 52 (67)
T ss_dssp SCEEEHHHHHHHHH
T ss_pred CCChhHHHHHHHHH
Confidence 47899999876543
No 293
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.45 E-value=35 Score=18.80 Aligned_cols=16 Identities=13% Similarity=0.368 Sum_probs=11.2
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 9 GEKPFECSECQKAFNT 24 (46)
T ss_dssp CCCSEECSSSCCEESS
T ss_pred CCCCcCCCCCCcccCC
Confidence 3566788888887644
No 294
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.44 E-value=35 Score=18.80 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=10.7
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQ 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCCCCCccCC
Confidence 466788888887643
No 295
>3j20_P 30S ribosomal protein S14P type Z; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.43 E-value=70 Score=19.76 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=18.5
Q ss_pred ccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 17 SNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 17 ~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
+.+....|+.||+ ....+..+| .-+|..|+-.+.
T Consensus 14 ~grg~~rC~vcGr--------~~g~iRkfG----L~~cR~cfRe~A 47 (56)
T 3j20_P 14 FGKGARRCIRCGQ--------YGPIIRIQG----LMLCRHCFREVA 47 (56)
T ss_dssp SSSTTCCCSSSCC--------SSSCCCTTT----CCCCHHHHHHHH
T ss_pred cCCCceEeecCCC--------CcccccccC----ChHHHHHHHHHH
Confidence 3344566888875 233333333 234888886653
No 296
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.31 E-value=32 Score=19.07 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=10.9
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~f~~ 24 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRV 24 (46)
T ss_dssp SCCSCBCSSSCCBCSS
T ss_pred CCcccCCCCCCcccCc
Confidence 3466788888876543
No 297
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=21.12 E-value=43 Score=23.06 Aligned_cols=11 Identities=27% Similarity=0.830 Sum_probs=6.1
Q ss_pred ccccccceecC
Q 022927 23 HCRCCGRTLCH 33 (290)
Q Consensus 23 hCr~cg~v~C~ 33 (290)
||+.||..|=+
T Consensus 56 ~C~~Cg~~~AG 66 (92)
T 3iz5_m 56 GCKDCGKVKAG 66 (92)
T ss_dssp ECSSSCCEEEC
T ss_pred EcCCCCCEEeC
Confidence 56666655543
No 298
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.90 E-value=36 Score=18.72 Aligned_cols=15 Identities=20% Similarity=0.527 Sum_probs=11.0
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2yts_A 10 EKPYICNECGKSFIQ 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCEECCCCChhhCC
Confidence 566788888887654
No 299
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.86 E-value=32 Score=19.12 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=9.6
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2eom_A 10 ERGHRCSDCGKFFL 23 (46)
T ss_dssp CSSCCCSSSCCCCS
T ss_pred CCCcCCCCCCCeeC
Confidence 45677888877653
No 300
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.80 E-value=31 Score=18.86 Aligned_cols=14 Identities=21% Similarity=0.638 Sum_probs=9.6
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (44)
T 2eou_A 10 KTTSECQECGKIFR 23 (44)
T ss_dssp SCCCCCTTTCCCCS
T ss_pred CcCeECCCCCcccC
Confidence 45677888887653
No 301
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.76 E-value=37 Score=18.74 Aligned_cols=15 Identities=20% Similarity=0.561 Sum_probs=11.0
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2enc_A 10 EKPFKCEECGKGFYT 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCcCCCCCCCcCCC
Confidence 466788888887654
No 302
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.69 E-value=36 Score=18.51 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=10.6
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.+.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (44)
T 2emb_A 10 RKRYECSKCQATFNL 24 (44)
T ss_dssp CSSEECTTTCCEESC
T ss_pred CCCeECCCCCCccCC
Confidence 456778888887643
No 303
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.57 E-value=37 Score=18.46 Aligned_cols=15 Identities=20% Similarity=0.490 Sum_probs=11.0
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQ 24 (44)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCCeECCCCCchhCC
Confidence 466788888887754
No 304
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=20.48 E-value=27 Score=23.87 Aligned_cols=46 Identities=11% Similarity=0.207 Sum_probs=30.3
Q ss_pred ccccccCCCCCccccccccccccceecCCCCCCcccccCCCCCCcccccccchhhhc
Q 022927 6 LQNLRLISHIRSNLLQHHCRCCGRTLCHEHSSDQMTLPQFGIHTNVRVCADCFNSSS 62 (290)
Q Consensus 6 ~~~~~c~~~f~~~~rrhhCr~cg~v~C~~c~~~~~~~~~~~~~~~~rvC~~C~~~~~ 62 (290)
..|-.|...|. .....-.||.+||..|...+.. ....|..|...+.
T Consensus 23 ~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~--------~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 23 LRCGICFEYFN---IAMIIPQCSHNYCSLCIRKFLS--------YKTQCPTCCVTVT 68 (99)
T ss_dssp TBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHT--------TCCBCTTTCCBCC
T ss_pred CCcccCChhhC---CcCEECCCCCHhhHHHHHHHHH--------CCCCCCCCCCcCC
Confidence 45677766664 2223347999999999876643 1247888876654
No 305
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.47 E-value=34 Score=18.29 Aligned_cols=15 Identities=20% Similarity=0.596 Sum_probs=10.2
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.+.+.|..||+.|-.
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQ 23 (42)
T ss_dssp CCSBCCTTTTCCBSS
T ss_pred CCCeeCCCccchhCC
Confidence 456778888876543
No 306
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.46 E-value=37 Score=18.68 Aligned_cols=14 Identities=21% Similarity=0.598 Sum_probs=10.2
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2eor_A 10 EKPYNCEECGKAFI 23 (46)
T ss_dssp CCSEECTTTCCEES
T ss_pred CcCccCCCCCCCcC
Confidence 46677888887764
No 307
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.43 E-value=33 Score=18.97 Aligned_cols=16 Identities=19% Similarity=0.546 Sum_probs=10.9
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQ 24 (46)
T ss_dssp SSCSSSCCSSCCCCSS
T ss_pred CCCCeECCCCCcccCC
Confidence 3566788888876543
No 308
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.32 E-value=38 Score=18.70 Aligned_cols=15 Identities=20% Similarity=0.459 Sum_probs=10.5
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+-|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2em4_A 10 QRPYECIECGKAFKT 24 (46)
T ss_dssp SSSEECSSSCCEESS
T ss_pred CcCcCCCCCCCccCC
Confidence 466778888877643
No 309
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.27 E-value=35 Score=18.89 Aligned_cols=14 Identities=21% Similarity=0.491 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q 022927 19 LLQHHCRCCGRTLC 32 (290)
Q Consensus 19 ~rrhhCr~cg~v~C 32 (290)
.|.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2en9_A 10 KKLFKCNECKKTFT 23 (46)
T ss_dssp SCCCBCTTTCCBCS
T ss_pred CCCEECCccCcccC
Confidence 46677888887654
No 310
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=20.24 E-value=33 Score=18.41 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=12.3
Q ss_pred CCCccccccccccccc
Q 022927 14 HIRSNLLQHHCRCCGR 29 (290)
Q Consensus 14 ~f~~~~rrhhCr~cg~ 29 (290)
.+.=|.||..|..||.
T Consensus 12 ~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 12 CLNNFRKRLKCFRCGA 27 (32)
T ss_dssp CCEEETTCCBCTTTCC
T ss_pred cCCcChhcceecCCCC
Confidence 4456788899998874
No 311
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.23 E-value=38 Score=18.66 Aligned_cols=16 Identities=13% Similarity=0.351 Sum_probs=11.6
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~~~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRY 24 (46)
T ss_dssp TCCSEECSSSCCEESS
T ss_pred CCCCeeCcccCcccCC
Confidence 3567888888887754
No 312
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=20.18 E-value=38 Score=21.35 Aligned_cols=9 Identities=0% Similarity=-0.319 Sum_probs=6.1
Q ss_pred ccccCCCCC
Q 022927 8 NLRLISHIR 16 (290)
Q Consensus 8 ~~~c~~~f~ 16 (290)
|-.|+..|.
T Consensus 4 C~~C~~~f~ 12 (82)
T 2kmk_A 4 CKICGKSFK 12 (82)
T ss_dssp CSSSCCEES
T ss_pred CCCCccccc
Confidence 566777775
No 313
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.18 E-value=36 Score=18.28 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=10.2
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+-|..||+.|-.
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 9 EKPYPCEICGTRFRH 23 (42)
T ss_dssp SCCBCCSSSCCCBSS
T ss_pred CCCEECCCCCCccCC
Confidence 456778888876543
No 314
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.16 E-value=39 Score=18.68 Aligned_cols=15 Identities=20% Similarity=0.421 Sum_probs=11.1
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSC 24 (46)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CCCEECcCCCCcCCC
Confidence 466788888887754
No 315
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.15 E-value=38 Score=18.13 Aligned_cols=15 Identities=20% Similarity=0.561 Sum_probs=10.4
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+-|..||+.|-.
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2en2_A 9 EKPYKCETCGARFVQ 23 (42)
T ss_dssp SCSEECTTTCCEESS
T ss_pred CCCEeCCCcChhhCC
Confidence 456778888877643
No 316
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.13 E-value=56 Score=22.50 Aligned_cols=9 Identities=0% Similarity=-0.459 Sum_probs=4.4
Q ss_pred ccccCCCCC
Q 022927 8 NLRLISHIR 16 (290)
Q Consensus 8 ~~~c~~~f~ 16 (290)
|-.|+..|.
T Consensus 38 C~~C~~~f~ 46 (124)
T 2dlq_A 38 CPKCGKCYF 46 (124)
T ss_dssp CTTTCCBCS
T ss_pred CCCCCchhc
Confidence 444555553
No 317
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.13 E-value=38 Score=18.64 Aligned_cols=16 Identities=19% Similarity=0.457 Sum_probs=11.6
Q ss_pred cccccccccccceecC
Q 022927 18 NLLQHHCRCCGRTLCH 33 (290)
Q Consensus 18 ~~rrhhCr~cg~v~C~ 33 (290)
-.|.+.|..||+.|-.
T Consensus 9 ~~k~~~C~~C~k~f~~ 24 (46)
T 2em7_A 9 GEKPYKCEECGKGFIC 24 (46)
T ss_dssp CCCSEECSSSCCEESC
T ss_pred CCcCccCCCccchhCC
Confidence 3567888888887754
No 318
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.13 E-value=38 Score=18.67 Aligned_cols=15 Identities=20% Similarity=0.525 Sum_probs=11.4
Q ss_pred ccccccccccceecC
Q 022927 19 LLQHHCRCCGRTLCH 33 (290)
Q Consensus 19 ~rrhhCr~cg~v~C~ 33 (290)
.|.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2eq0_A 10 EKPYKCHECGKVFRR 24 (46)
T ss_dssp CCCEECTTTCCEESS
T ss_pred CCCeECCCCCchhCC
Confidence 567888888887754
Done!