BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022929
MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATSRP
ASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGG
TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYV
SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEW
FQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQVTIV

High Scoring Gene Products

Symbol, full name Information P value
APG1
AT3G63410
protein from Arabidopsis thaliana 6.7e-120
NSE_0950
ubiquinone/menaquinone biosynthesis methlytransferase UbiE
protein from Neorickettsia sennetsu str. Miyayama 2.0e-05
COQ5
Uncharacterized protein
protein from Canis lupus familiaris 0.00014
COQ5
Uncharacterized protein
protein from Sus scrofa 0.00019
yafE
predicted S-adenosylmethionine-dependent methyltransferase
protein from Escherichia coli K-12 0.00028
Coq5
coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
gene from Rattus norvegicus 0.00029
DET_1591
methyltransferase, UbiE/COQ5 family
protein from Dehalococcoides ethenogenes 195 0.00035
SPO0620
Uncharacterized protein
protein from Ruegeria pomeroyi DSS-3 0.00037
SPO_0620
conserved hypothetical protein
protein from Ruegeria pomeroyi DSS-3 0.00037
COQ5
Uncharacterized protein
protein from Canis lupus familiaris 0.00037
BA_2106
Uncharacterized protein
protein from Bacillus anthracis 0.00037
BA_2106
conserved hypothetical protein
protein from Bacillus anthracis str. Ames 0.00037
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
protein from Bos taurus 0.00054
zgc:92445 gene_product from Danio rerio 0.00066
COQ5
cDNA FLJ55122, highly similar to Ubiquinone biosynthesis methyltransferaseCOQ5, mitochondrial (EC 2.1.1.-)
protein from Homo sapiens 0.00092
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
protein from Homo sapiens 0.00098

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022929
        (290 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2087393 - symbol:APG1 "ALBINO OR PALE GREEN MU...  1180  6.7e-120  1
TIGR_CMR|NSE_0950 - symbol:NSE_0950 "ubiquinone/menaquino...   117  2.0e-05   2
UNIPROTKB|E2RF28 - symbol:COQ5 "Uncharacterized protein" ...    95  0.00014   2
UNIPROTKB|F1RJK0 - symbol:COQ5 "Uncharacterized protein" ...    93  0.00019   2
UNIPROTKB|P30866 - symbol:yafE "predicted S-adenosylmethi...   111  0.00028   1
RGD|1310857 - symbol:Coq5 "coenzyme Q5 homolog, methyltra...    93  0.00029   2
TIGR_CMR|DET_1591 - symbol:DET_1591 "methyltransferase, U...   111  0.00035   1
UNIPROTKB|Q5LVS6 - symbol:SPO0620 "Uncharacterized protei...   110  0.00037   1
TIGR_CMR|SPO_0620 - symbol:SPO_0620 "conserved hypothetic...   110  0.00037   1
UNIPROTKB|J9P2R9 - symbol:COQ5 "Uncharacterized protein" ...    95  0.00037   2
UNIPROTKB|Q81RE2 - symbol:BA_2106 "Uncharacterized protei...   110  0.00037   1
TIGR_CMR|BA_2106 - symbol:BA_2106 "conserved hypothetical...   110  0.00037   1
UNIPROTKB|Q0P5A2 - symbol:COQ5 "2-methoxy-6-polyprenyl-1,...    89  0.00054   2
ZFIN|ZDB-GENE-040912-5 - symbol:zgc:92445 "zgc:92445" spe...    97  0.00066   2
ASPGD|ASPL0000048211 - symbol:AN1743 species:162425 "Emer...   100  0.00084   2
UNIPROTKB|B4DP72 - symbol:COQ5 "2-methoxy-6-polyprenyl-1,...    89  0.00092   2
UNIPROTKB|Q5HYK3 - symbol:COQ5 "2-methoxy-6-polyprenyl-1,...    92  0.00098   2


>TAIR|locus:2087393 [details] [associations]
            symbol:APG1 "ALBINO OR PALE GREEN MUTANT 1" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0008168 "methyltransferase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009706 "chloroplast inner membrane" evidence=ISS] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0008757
            "S-adenosylmethionine-dependent methyltransferase activity"
            evidence=ISS] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP] [GO:0051741 "2-methyl-6-phytyl-1,4-benzoquinone
            methyltransferase activity" evidence=IDA] [GO:0006655
            "phosphatidylglycerol biosynthetic process" evidence=RCA]
            [GO:0019288 "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA] [GO:0009536
            "plastid" evidence=IDA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002686 EMBL:AL163818 GO:GO:0009706 GO:GO:0010189
            GO:GO:0019031 GO:GO:0010236 EMBL:AK316671 IPI:IPI00538321
            PIR:T49182 RefSeq:NP_191900.1 UniGene:At.48806 UniGene:At.69648
            ProteinModelPortal:Q9LY74 SMR:Q9LY74 STRING:Q9LY74 PRIDE:Q9LY74
            EnsemblPlants:AT3G63410.1 GeneID:825516 KEGG:ath:AT3G63410
            TAIR:At3g63410 InParanoid:Q9LY74 KO:K12502 OMA:QIVPKGM
            PhylomeDB:Q9LY74 ProtClustDB:PLN02490 Genevestigator:Q9LY74
            GO:GO:0051741 Uniprot:Q9LY74
        Length = 338

 Score = 1180 (420.4 bits), Expect = 6.7e-120, P = 6.7e-120
 Identities = 227/294 (77%), Positives = 248/294 (84%)

Query:     1 MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
             MAS MLNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS S
Sbjct:     1 MASLMLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSS 53

Query:    56 A--TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
             +  +SRP++QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct:    54 SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query:   114 VVDVXXXXXXXXXXIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
             VVDV          IVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct:   114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query:   174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
             DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct:   174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query:   234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
             EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct:   234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 287


>TIGR_CMR|NSE_0950 [details] [associations]
            symbol:NSE_0950 "ubiquinone/menaquinone biosynthesis
            methlytransferase UbiE" species:222891 "Neorickettsia sennetsu str.
            Miyayama" [GO:0006744 "ubiquinone biosynthetic process"
            evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
            [GO:0008168 "methyltransferase activity" evidence=ISS] [GO:0009234
            "menaquinone biosynthetic process" evidence=ISS] InterPro:IPR004033
            InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184
            UniPathway:UPA00079 UniPathway:UPA00232 GO:GO:0006744 GO:GO:0009060
            EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008425
            eggNOG:COG2226 HOGENOM:HOG000249463 OMA:PYQYLVE InterPro:IPR025765
            PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934 GO:GO:0009234 KO:K03183
            HAMAP:MF_01813 PROSITE:PS51608 RefSeq:YP_506814.1
            ProteinModelPortal:Q2GCI2 STRING:Q2GCI2 GeneID:3931388
            KEGG:nse:NSE_0950 PATRIC:22681877 ProtClustDB:CLSK2527959
            BioCyc:NSEN222891:GHFU-952-MONOMER Uniprot:Q2GCI2
        Length = 230

 Score = 117 (46.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 32/105 (30%), Positives = 52/105 (49%)

Query:   111 NMLVVDVXXXXXXXXXXIVK-HVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDA 166
             N  V+D+          ++K H+  + + + D++   L  AK +   E     K+V  DA
Sbjct:    45 NQRVLDMAAGTGDITLRLLKTHIPVE-IILCDKNHEMLEIAKDRLLDEGYVNLKVVSADA 103

Query:   167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
               LPF     D YV A  +  + + +R + EAYRVLK GG+ +C+
Sbjct:   104 AQLPFEDCSFDHYVVAFGVRNFSNIERSLTEAYRVLKPGGRFSCL 148

 Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query:   231 FPKEEEYIEWFQKAGFKDVQLKR 253
             FP  E + E  + AGF   + +R
Sbjct:   194 FPDAETFCEIIRSAGFGRTKYRR 216


>UNIPROTKB|E2RF28 [details] [associations]
            symbol:COQ5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0008168 "methyltransferase activity" evidence=IEA]
            InterPro:IPR004033 InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183
            PROSITE:PS01184 GO:GO:0005739 GO:GO:0008168 GO:GO:0032259 KO:K06127
            OMA:PYQYLVE InterPro:IPR025765 PANTHER:PTHR10108:SF24
            TIGRFAMs:TIGR01934 CTD:84274 GeneTree:ENSGT00390000001654
            HAMAP:MF_01813 PROSITE:PS51608 EMBL:AAEX03014735 RefSeq:XP_854268.1
            ProteinModelPortal:E2RF28 Ensembl:ENSCAFT00000016453 GeneID:611501
            KEGG:cfa:611501 NextBio:20897037 Uniprot:E2RF28
        Length = 327

 Score = 95 (38.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 29/79 (36%), Positives = 39/79 (49%)

Query:   137 VTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
             V + D +   L   KQK   +  K     V GDAE+LPF  D  D Y  A  I       
Sbjct:   167 VVVCDINKEMLKIGKQKARAQGYKAGLAWVLGDAEELPFDDDKFDVYTIAFGIRNVTHID 226

Query:   193 RGIREAYRVLKLGGK-ACI 210
             + ++EA+RVLK GG+  C+
Sbjct:   227 QALQEAHRVLKPGGRFLCL 245

 Score = 63 (27.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             ++G V    W S +Y  +    FP +EE+ E  + AGF+ V
Sbjct:   269 VLGEVIAGDWKSYQYLVESIRQFPSQEEFREMIEDAGFEKV 309


>UNIPROTKB|F1RJK0 [details] [associations]
            symbol:COQ5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR004033
            InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184
            GO:GO:0005739 GO:GO:0008168 GO:GO:0032259 OMA:PYQYLVE
            InterPro:IPR025765 PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934
            GeneTree:ENSGT00390000001654 HAMAP:MF_01813 PROSITE:PS51608
            EMBL:CU468509 Ensembl:ENSSSCT00000010853 Uniprot:F1RJK0
        Length = 329

 Score = 93 (37.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 23/50 (46%), Positives = 29/50 (58%)

Query:   162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
             V GDAE+LPF  D  D Y  A  I       R ++EA+RVLK GG+  C+
Sbjct:   198 VLGDAEELPFDDDKFDVYTIAFGIRNVTHIDRALQEAHRVLKPGGRFLCL 247

 Score = 64 (27.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 14/46 (30%), Positives = 24/46 (52%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             ++G V    W S +Y  +    FP +EE+ E  + AGF+ V  + +
Sbjct:   271 VLGEVIAGDWKSYQYLVESIRQFPSQEEFKEMIEDAGFQKVTYENL 316


>UNIPROTKB|P30866 [details] [associations]
            symbol:yafE "predicted S-adenosylmethionine-dependent
            methyltransferase" species:83333 "Escherichia coli K-12"
            [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0032259
            "methylation" evidence=IEA] InterPro:IPR013216 Pfam:PF08241
            EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR EMBL:U70214 GO:GO:0008168 GO:GO:0032259
            eggNOG:COG0500 EMBL:D12650 EMBL:X60739 PIR:JS0718
            RefSeq:NP_414746.1 RefSeq:YP_488507.1 ProteinModelPortal:P30866
            SMR:P30866 EnsemblBacteria:EBESCT00000000249
            EnsemblBacteria:EBESCT00000016926 GeneID:12934477 GeneID:946197
            KEGG:ecj:Y75_p0201 KEGG:eco:b0210 PATRIC:32115533 EchoBASE:EB1604
            EcoGene:EG11651 HOGENOM:HOG000263425 OMA:GHASFTA
            ProtClustDB:CLSK514838 BioCyc:EcoCyc:EG11651-MONOMER
            BioCyc:ECOL316407:JW0200-MONOMER Genevestigator:P30866
            Uniprot:P30866
        Length = 207

 Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
 Identities = 32/102 (31%), Positives = 49/102 (48%)

Query:   134 AKNVTIL---DQSPHQL---AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187
             A+NV+ +   D S H L   A+A +   LK     +G AE LPF  +  D  +S  S  +
Sbjct:    14 AQNVSAVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHH 73

Query:   188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
             W D    +RE  R+LK GG+  ++  + P         D+W+
Sbjct:    74 WHDVGAALREVNRILKPGGRLIVMDVMSP----GHPVRDIWL 111


>RGD|1310857 [details] [associations]
            symbol:Coq5 "coenzyme Q5 homolog, methyltransferase (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005739
            "mitochondrion" evidence=IEA;ISO] [GO:0006744 "ubiquinone
            biosynthetic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR004033 InterPro:IPR023576
            Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184 UniPathway:UPA00232
            RGD:1310857 GO:GO:0005739 GO:GO:0006744 GO:GO:0008168
            eggNOG:COG2226 HOGENOM:HOG000249463 KO:K06127 OMA:PYQYLVE
            InterPro:IPR025765 PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934
            CTD:84274 GeneTree:ENSGT00390000001654 HOVERGEN:HBG081303
            OrthoDB:EOG4VQ9PR EMBL:BC098719 IPI:IPI00190886
            RefSeq:NP_001034111.1 UniGene:Rn.143996 ProteinModelPortal:Q4G064
            STRING:Q4G064 PhosphoSite:Q4G064 PRIDE:Q4G064
            Ensembl:ENSRNOT00000001546 GeneID:304542 KEGG:rno:304542
            UCSC:RGD:1310857 InParanoid:Q4G064 NextBio:653217
            Genevestigator:Q4G064 GermOnline:ENSRNOG00000001171 Uniprot:Q4G064
        Length = 327

 Score = 93 (37.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
 Identities = 23/50 (46%), Positives = 29/50 (58%)

Query:   162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
             V GDAE+LPF  D  D Y  A  I       R ++EA+RVLK GG+  C+
Sbjct:   196 VLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQEAHRVLKPGGRFLCL 245

 Score = 62 (26.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +IG V    W S +Y  +    FP +EE+ +  + AGF+ V
Sbjct:   269 VIGEVIAGDWKSYQYLVESIRKFPNQEEFKDMIEDAGFQKV 309


>TIGR_CMR|DET_1591 [details] [associations]
            symbol:DET_1591 "methyltransferase, UbiE/COQ5 family"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0008152
            "metabolic process" evidence=ISS] [GO:0008168 "methyltransferase
            activity" evidence=ISS] InterPro:IPR004033 Pfam:PF01209
            EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008168
            eggNOG:COG0500 KO:K00599 RefSeq:YP_182287.1
            ProteinModelPortal:Q3Z662 STRING:Q3Z662 GeneID:3229110
            KEGG:det:DET1591 PATRIC:21610194 HOGENOM:HOG000233961 OMA:MMARAKE
            ProtClustDB:CLSK836818 BioCyc:DETH243164:GJNF-1592-MONOMER
            Uniprot:Q3Z662
        Length = 221

 Score = 111 (44.1 bits), Expect = 0.00035, P = 0.00035
 Identities = 41/143 (28%), Positives = 66/143 (46%)

Query:    71 KEAFWFYRFLSIVYDHV----INPGHWTEDMRDDALEPADLSNRNMLVVDVXXXXXXXXX 126
             K  +W  R+ S VYD +      P    E  R   ++ A++  R+  ++D+         
Sbjct:    13 KTDYW-KRY-SKVYDFLTRLLFTPFGGEERFRRKFVDEANIQPRDN-IIDMCCGTGATTR 69

Query:   127 XIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADR-YVSAGSI 185
              +   +    VT +D SP  +A+AK+K         +   ++LPFP    D+ +VS G  
Sbjct:    70 LVAGKLKDGQVTGVDLSPDMMARAKEKVTGLPAVFQQASGDNLPFPEGTFDKAFVSYGLH 129

Query:   186 EYWPDPQR--GIREAYRVLKLGG 206
             E  P P R   I++ Y+VLK GG
Sbjct:   130 EM-PTPIRHEAIKQIYKVLKPGG 151


>UNIPROTKB|Q5LVS6 [details] [associations]
            symbol:SPO0620 "Uncharacterized protein" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR013216
            Pfam:PF08241 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008168
            GO:GO:0032259 RefSeq:YP_165879.1 ProteinModelPortal:Q5LVS6
            GeneID:3195691 KEGG:sil:SPO0620 PATRIC:23374507 OMA:IAGYIMA
            Uniprot:Q5LVS6
        Length = 208

 Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
 Identities = 47/191 (24%), Positives = 78/191 (40%)

Query:    62 SQPRFI--QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVXX 119
             S+P FI  Q +K   W    ++ V      P +      D AL   DL++ + L+ D+  
Sbjct:     2 SKPEFIARQGRKPTGWLGHIVARVMARETRPEN------DRALSFLDLADGDSLI-DIGC 54

Query:   120 XXXXXXXXIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECKIVE--GDAEDLPFPTDY 175
                       + V       +D S   L  A+A+ ++ + + ++     D   LPFP   
Sbjct:    55 GHGETLFQADRIVRLSGSVGVDFSEVMLKRARARNRDAVWDTRMAFHCADTAALPFPDKR 114

Query:   176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
               + +S  +I +WP+P   + EA+RVL+ GG+                F D    FP  +
Sbjct:   115 FGKALSVHTIYFWPNPAAHLAEAFRVLRRGGRFLFCYRSTADRRAVEEFPDTVYRFPSVQ 174

Query:   236 EYIEWFQKAGF 246
             E  E  +  GF
Sbjct:   175 EVEEKLKLVGF 185


>TIGR_CMR|SPO_0620 [details] [associations]
            symbol:SPO_0620 "conserved hypothetical protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR013216 Pfam:PF08241 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0008168 GO:GO:0032259
            RefSeq:YP_165879.1 ProteinModelPortal:Q5LVS6 GeneID:3195691
            KEGG:sil:SPO0620 PATRIC:23374507 OMA:IAGYIMA Uniprot:Q5LVS6
        Length = 208

 Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
 Identities = 47/191 (24%), Positives = 78/191 (40%)

Query:    62 SQPRFI--QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVXX 119
             S+P FI  Q +K   W    ++ V      P +      D AL   DL++ + L+ D+  
Sbjct:     2 SKPEFIARQGRKPTGWLGHIVARVMARETRPEN------DRALSFLDLADGDSLI-DIGC 54

Query:   120 XXXXXXXXIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECKIVE--GDAEDLPFPTDY 175
                       + V       +D S   L  A+A+ ++ + + ++     D   LPFP   
Sbjct:    55 GHGETLFQADRIVRLSGSVGVDFSEVMLKRARARNRDAVWDTRMAFHCADTAALPFPDKR 114

Query:   176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
               + +S  +I +WP+P   + EA+RVL+ GG+                F D    FP  +
Sbjct:   115 FGKALSVHTIYFWPNPAAHLAEAFRVLRRGGRFLFCYRSTADRRAVEEFPDTVYRFPSVQ 174

Query:   236 EYIEWFQKAGF 246
             E  E  +  GF
Sbjct:   175 EVEEKLKLVGF 185


>UNIPROTKB|J9P2R9 [details] [associations]
            symbol:COQ5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008168 "methyltransferase activity"
            evidence=IEA] InterPro:IPR004033 InterPro:IPR023576 Pfam:PF01209
            PROSITE:PS01183 PROSITE:PS01184 GO:GO:0008168 GO:GO:0032259
            InterPro:IPR025765 PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934
            GeneTree:ENSGT00390000001654 HAMAP:MF_01813 PROSITE:PS51608
            EMBL:AAEX03014735 Ensembl:ENSCAFT00000047435 Uniprot:J9P2R9
        Length = 461

 Score = 95 (38.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
 Identities = 29/79 (36%), Positives = 39/79 (49%)

Query:   137 VTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
             V + D +   L   KQK   +  K     V GDAE+LPF  D  D Y  A  I       
Sbjct:   301 VVVCDINKEMLKIGKQKARAQGYKAGLAWVLGDAEELPFDDDKFDVYTIAFGIRNVTHID 360

Query:   193 RGIREAYRVLKLGGK-ACI 210
             + ++EA+RVLK GG+  C+
Sbjct:   361 QALQEAHRVLKPGGRFLCL 379

 Score = 63 (27.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             ++G V    W S +Y  +    FP +EE+ E  + AGF+ V
Sbjct:   403 VLGEVIAGDWKSYQYLVESIRQFPSQEEFREMIEDAGFEKV 443


>UNIPROTKB|Q81RE2 [details] [associations]
            symbol:BA_2106 "Uncharacterized protein" species:1392
            "Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR013216 Pfam:PF08241
            EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
            GenomeReviews:AE017334_GR GO:GO:0008168 GO:GO:0032259
            RefSeq:NP_844505.1 RefSeq:YP_018747.1 ProteinModelPortal:Q81RE2
            DNASU:1085797 EnsemblBacteria:EBBACT00000013077
            EnsemblBacteria:EBBACT00000014566 GeneID:1085797 GeneID:2818724
            KEGG:ban:BA_2106 KEGG:bar:GBAA_2106 PATRIC:18781808
            HOGENOM:HOG000088788 OMA:ISEVMIQ ProtClustDB:CLSK916503
            BioCyc:BANT261594:GJ7F-2104-MONOMER Uniprot:Q81RE2
        Length = 209

 Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query:   140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
             +D S   + K K++    +   ++GD   LPF  +  +  ++  S+E+  +P R + E  
Sbjct:    48 VDLSEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIK 107

Query:   200 RVLKLGGKACI--IGP 213
             RVLK  G ACI  +GP
Sbjct:   108 RVLKSDGYACIAILGP 123


>TIGR_CMR|BA_2106 [details] [associations]
            symbol:BA_2106 "conserved hypothetical protein"
            species:198094 "Bacillus anthracis str. Ames" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR013216 Pfam:PF08241 EMBL:AE016879 EMBL:AE017334
            GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0008168
            GO:GO:0032259 RefSeq:NP_844505.1 RefSeq:YP_018747.1
            ProteinModelPortal:Q81RE2 DNASU:1085797
            EnsemblBacteria:EBBACT00000013077 EnsemblBacteria:EBBACT00000014566
            GeneID:1085797 GeneID:2818724 KEGG:ban:BA_2106 KEGG:bar:GBAA_2106
            PATRIC:18781808 HOGENOM:HOG000088788 OMA:ISEVMIQ
            ProtClustDB:CLSK916503 BioCyc:BANT261594:GJ7F-2104-MONOMER
            Uniprot:Q81RE2
        Length = 209

 Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query:   140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
             +D S   + K K++    +   ++GD   LPF  +  +  ++  S+E+  +P R + E  
Sbjct:    48 VDLSEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIK 107

Query:   200 RVLKLGGKACI--IGP 213
             RVLK  G ACI  +GP
Sbjct:   108 RVLKSDGYACIAILGP 123


>UNIPROTKB|Q0P5A2 [details] [associations]
            symbol:COQ5 "2-methoxy-6-polyprenyl-1,4-benzoquinol
            methylase, mitochondrial" species:9913 "Bos taurus" [GO:0006744
            "ubiquinone biosynthetic process" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR004033 InterPro:IPR023576
            Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184 UniPathway:UPA00232
            GO:GO:0005739 GO:GO:0006744 GO:GO:0008168 eggNOG:COG2226
            HOGENOM:HOG000249463 KO:K06127 OMA:PYQYLVE InterPro:IPR025765
            PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934 EMBL:BC120308
            IPI:IPI00695952 RefSeq:NP_001069452.1 UniGene:Bt.5676
            ProteinModelPortal:Q0P5A2 STRING:Q0P5A2 Ensembl:ENSBTAT00000020929
            GeneID:533208 KEGG:bta:533208 CTD:84274
            GeneTree:ENSGT00390000001654 HOVERGEN:HBG081303 InParanoid:Q0P5A2
            OrthoDB:EOG4VQ9PR NextBio:20875958 ArrayExpress:Q0P5A2
            Uniprot:Q0P5A2
        Length = 330

 Score = 89 (36.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
 Identities = 27/80 (33%), Positives = 40/80 (50%)

Query:   136 NVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
             +V + D +   L   KQK   +  K     + GDAE+LPF  +  D Y  A  I      
Sbjct:   166 HVMVCDINKEMLKIGKQKARAQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHI 225

Query:   192 QRGIREAYRVLKLGGK-ACI 210
              + ++EA+RVLK GG+  C+
Sbjct:   226 DQALQEAHRVLKPGGRFLCL 245

 Score = 64 (27.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
 Identities = 14/46 (30%), Positives = 24/46 (52%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             ++G V    W S +Y  +    FP +EE+ E  + AGF+ V  + +
Sbjct:   269 VLGEVIAGDWKSYQYLVESIRQFPSQEEFKEMIEDAGFQKVTYENL 314


>ZFIN|ZDB-GENE-040912-5 [details] [associations]
            symbol:zgc:92445 "zgc:92445" species:7955 "Danio
            rerio" [GO:0008168 "methyltransferase activity" evidence=IEA]
            [GO:0032259 "methylation" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
            InterPro:IPR004033 InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183
            PROSITE:PS01184 UniPathway:UPA00232 ZFIN:ZDB-GENE-040912-5
            GO:GO:0005739 GO:GO:0006744 GO:GO:0008168 eggNOG:COG2226
            HOGENOM:HOG000249463 KO:K06127 InterPro:IPR025765
            PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934 HOVERGEN:HBG081303
            OrthoDB:EOG4VQ9PR EMBL:BC078433 IPI:IPI00499950
            RefSeq:NP_001004541.1 UniGene:Dr.82529 ProteinModelPortal:Q66L51
            STRING:Q66L51 PRIDE:Q66L51 GeneID:447802 KEGG:dre:447802
            InParanoid:Q66L51 NextBio:20832325 Uniprot:Q66L51
        Length = 327

 Score = 97 (39.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query:   162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
             V GDAE+LPF  D  D Y  A  I      ++ ++EA+RVLK GG+  C+
Sbjct:   196 VAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCL 245

 Score = 54 (24.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
             ++G V    W S +Y  +    FP +E + E  + AGF  VQ
Sbjct:   269 VLGEVIAGDWKSYQYLVESIRKFPDQEIFKEMIEDAGFFRVQ 310


>ASPGD|ASPL0000048211 [details] [associations]
            symbol:AN1743 species:162425 "Emericella nidulans"
            [GO:0006547 "histidine metabolic process" evidence=RCA] [GO:0008168
            "methyltransferase activity" evidence=RCA] [GO:0071585
            "detoxification of cadmium ion" evidence=IEA] [GO:0006744
            "ubiquinone biosynthetic process" evidence=IEA] [GO:0071276
            "cellular response to cadmium ion" evidence=IEA] [GO:0009060
            "aerobic respiration" evidence=IEA] [GO:0005759 "mitochondrial
            matrix" evidence=IEA] [GO:0043334
            "2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase
            activity" evidence=IEA] InterPro:IPR004033 InterPro:IPR023576
            Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184 GO:GO:0005759
            EMBL:AACD01000027 EMBL:BN001307 GO:GO:0006744 GO:GO:0008168
            GO:GO:0032259 eggNOG:COG2226 HOGENOM:HOG000249463 KO:K06127
            OMA:PYQYLVE InterPro:IPR025765 PANTHER:PTHR10108:SF24
            TIGRFAMs:TIGR01934 OrthoDB:EOG4N605V HAMAP:MF_01813 PROSITE:PS51608
            RefSeq:XP_659347.1 ProteinModelPortal:Q5BCI7 STRING:Q5BCI7
            EnsemblFungi:CADANIAT00008390 GeneID:2875111 KEGG:ani:AN1743.2
            Uniprot:Q5BCI7
        Length = 314

 Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 30/90 (33%), Positives = 44/90 (48%)

Query:   129 VKHVDAKNVTILDQSPHQLAKAKQKE---PL---KECKIVEGDAEDLP-FPTDYADRYVS 181
             + H     V I D +P  LA+ K++    P    +    ++G+AE +P  P +  D Y  
Sbjct:   137 INHDYHTRVKIADINPDMLAEGKKRSIQTPYYNSERLSFMQGNAEHMPSIPDNSVDLYTV 196

Query:   182 AGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
                I  + D Q  + EAYRVLK GG  AC+
Sbjct:   197 VFGIRNFTDKQAALVEAYRVLKPGGVFACM 226

 Score = 49 (22.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query:   222 RYFADVWMLFPKEEEYIEWFQKAGF 246
             +Y  +    FP +EE+    QKAGF
Sbjct:   263 QYLVESIEKFPSQEEFRGMIQKAGF 287


>UNIPROTKB|B4DP72 [details] [associations]
            symbol:COQ5 "2-methoxy-6-polyprenyl-1,4-benzoquinol
            methylase, mitochondrial" species:9606 "Homo sapiens" [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR004033
            InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184
            GO:GO:0008168 HOGENOM:HOG000249463 InterPro:IPR025765
            PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934 HOVERGEN:HBG081303
            UniGene:Hs.17250 HGNC:HGNC:28722 ChiTaRS:COQ5 EMBL:AC063943
            HAMAP:MF_01813 PROSITE:PS51608 EMBL:AK298214 IPI:IPI00908347
            SMR:B4DP72 STRING:B4DP72 Ensembl:ENST00000445328 UCSC:uc010szj.2
            Uniprot:B4DP72
        Length = 253

 Score = 89 (36.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query:   162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI 210
             V GDAE+LPF  D  D Y  A  I       + ++EA+RVLK GG+  C+
Sbjct:   122 VLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCL 171

 Score = 58 (25.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             ++G V    W S +Y  +    FP +EE+ +  + AGF  V
Sbjct:   195 VLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAGFHKV 235


>UNIPROTKB|Q5HYK3 [details] [associations]
            symbol:COQ5 "2-methoxy-6-polyprenyl-1,4-benzoquinol
            methylase, mitochondrial" species:9606 "Homo sapiens" [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone biosynthetic
            process" evidence=IEA] InterPro:IPR004033 InterPro:IPR023576
            Pfam:PF01209 PROSITE:PS01183 PROSITE:PS01184 UniPathway:UPA00232
            GO:GO:0005739 EMBL:CH471054 GO:GO:0006744 GO:GO:0008168
            eggNOG:COG2226 HOGENOM:HOG000249463 KO:K06127 OMA:PYQYLVE
            InterPro:IPR025765 PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934
            CTD:84274 HOVERGEN:HBG081303 EMBL:AK057777 EMBL:AK222610
            EMBL:AK293656 EMBL:BX647562 EMBL:BC004916 EMBL:BC107874
            IPI:IPI00456965 IPI:IPI00742661 RefSeq:NP_115690.3 UniGene:Hs.17250
            ProteinModelPortal:Q5HYK3 SMR:Q5HYK3 STRING:Q5HYK3
            PhosphoSite:Q5HYK3 DMDM:90111987 PaxDb:Q5HYK3 PRIDE:Q5HYK3
            Ensembl:ENST00000288532 GeneID:84274 KEGG:hsa:84274 UCSC:uc001tyn.3
            GeneCards:GC12M120941 HGNC:HGNC:28722 HPA:HPA049487
            neXtProt:NX_Q5HYK3 PharmGKB:PA143485438 InParanoid:Q5HYK3
            ChiTaRS:COQ5 GenomeRNAi:84274 NextBio:73846 ArrayExpress:Q5HYK3
            Bgee:Q5HYK3 CleanEx:HS_COQ5 Genevestigator:Q5HYK3
            GermOnline:ENSG00000110871 Uniprot:Q5HYK3
        Length = 327

 Score = 92 (37.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
 Identities = 28/79 (35%), Positives = 39/79 (49%)

Query:   137 VTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
             V + D +   L   KQK   +  +     V GDAE+LPF  D  D Y  A  I       
Sbjct:   167 VVVCDINKEMLKVGKQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHID 226

Query:   193 RGIREAYRVLKLGGK-ACI 210
             + ++EA+RVLK GG+  C+
Sbjct:   227 QALQEAHRVLKPGGRFLCL 245

 Score = 58 (25.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query:   210 IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             ++G V    W S +Y  +    FP +EE+ +  + AGF  V
Sbjct:   269 VLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAGFHKV 309


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      290       280   0.00082  115 3  11 22  0.48    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  17
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  229 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.61u 0.08s 22.69t   Elapsed:  00:00:01
  Total cpu time:  22.61u 0.08s 22.69t   Elapsed:  00:00:01
  Start:  Sat May 11 02:43:46 2013   End:  Sat May 11 02:43:47 2013

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