BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022929
         (290 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|219842168|dbj|BAH10641.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Hevea brasiliensis]
          Length = 340

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/291 (86%), Positives = 273/291 (93%), Gaps = 5/291 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSI----KCSLSA 56
           MAS MLNGAE FTL+ G+TPKG  FL SDFHG H P+++LI+  R  ++     KC+LSA
Sbjct: 1   MASLMLNGAENFTLMSGITPKGLGFLGSDFHGNHFPRVNLISSSRISRTRTVMPKCNLSA 60

Query: 57  TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVD 116
            SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL+NRN+LVVD
Sbjct: 61  -SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNNRNLLVVD 119

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176
           VGGGTGFTTLGIVKHVDA+NVTILDQSPHQLAKAKQKEPLK+CKI+EGDAEDLPFPTDYA
Sbjct: 120 VGGGTGFTTLGIVKHVDAQNVTILDQSPHQLAKAKQKEPLKDCKIIEGDAEDLPFPTDYA 179

Query: 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEE 236
           DRYVSAGSIEYWPDPQRGI+EAYRVLKLGGKAC+IGPVYPTFWLSR+FADVWMLFPKEEE
Sbjct: 180 DRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPKEEE 239

Query: 237 YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           YIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL++
Sbjct: 240 YIEWFEKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKL 290


>gi|255559875|ref|XP_002520956.1| chloroplast inner envelope protein, putative [Ricinus communis]
 gi|223539793|gb|EEF41373.1| chloroplast inner envelope protein, putative [Ricinus communis]
          Length = 342

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/293 (87%), Positives = 271/293 (92%), Gaps = 7/293 (2%)

Query: 1   MASSMLNGAETFTLIR--GMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSI----KCSL 54
           MASSMLNGAE  TL+R      KG SF  SDF+GKH P+++L +  R +++     KCSL
Sbjct: 1   MASSMLNGAENLTLMRIKSTNHKGLSFSGSDFNGKHFPRVNLTSSSRILKTTTIAPKCSL 60

Query: 55  SATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
           SA SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+RNMLV
Sbjct: 61  SA-SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSDRNMLV 119

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPFPTD
Sbjct: 120 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTD 179

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FADVWMLFPKE
Sbjct: 180 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPKE 239

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 240 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 292


>gi|224062301|ref|XP_002300813.1| predicted protein [Populus trichocarpa]
 gi|222842539|gb|EEE80086.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/292 (87%), Positives = 269/292 (92%), Gaps = 7/292 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MASSMLNGAE  TLIRG+TPKG  F  SD  G+H  K++ +A     K RT+  + CSLS
Sbjct: 1   MASSMLNGAENLTLIRGITPKGLGFGGSDLQGRHFSKVNAVASTRISKARTLTPM-CSLS 59

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
           A SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADLSNRNMLVV
Sbjct: 60  A-SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLSNRNMLVV 118

Query: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175
           DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKI+EGDAEDLPF TDY
Sbjct: 119 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGDAEDLPFRTDY 178

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRYVSAGSIEYWPDPQRGI+EAYRVLKLGGKAC+IGPVYPTFWLSR+FAD WMLFPKEE
Sbjct: 179 ADRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEE 238

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 239 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 290


>gi|224085545|ref|XP_002307615.1| predicted protein [Populus trichocarpa]
 gi|222857064|gb|EEE94611.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/291 (85%), Positives = 266/291 (91%), Gaps = 5/291 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQ----SIKCSLSA 56
           M SS+ NGAE   LIRG+TPKG  FL SD  G+H  K+SLI+  R  +    + KCSLSA
Sbjct: 1   MTSSVFNGAENLALIRGITPKGLGFLGSDLQGRHFSKVSLISSTRISKARTLTPKCSLSA 60

Query: 57  TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVD 116
             RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADLS+RN +VVD
Sbjct: 61  -PRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLSDRNTIVVD 119

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176
           VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKIVEGDAEDLPFPTDYA
Sbjct: 120 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIVEGDAEDLPFPTDYA 179

Query: 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEE 236
           DRYVSAGSIEYWPDPQRGI+EAYRVLKL GKAC+IGPV+PTFWLSR+FADVWMLFPKEEE
Sbjct: 180 DRYVSAGSIEYWPDPQRGIKEAYRVLKLEGKACLIGPVHPTFWLSRFFADVWMLFPKEEE 239

Query: 237 YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 240 YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 290


>gi|356536451|ref|XP_003536751.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Glycine max]
          Length = 342

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/294 (83%), Positives = 263/294 (89%), Gaps = 9/294 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKP-------RTVQSIKCS 53
           MAS ML+G E  TL R +T  G  F  SD HGK+ P++S +A         R++   KCS
Sbjct: 1   MASVMLSGTEKLTL-RTLTGNGLGFTGSDLHGKNFPRVSFVATTSAKVPNFRSLVVPKCS 59

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +SA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL++RNM+
Sbjct: 60  VSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMI 118

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF T
Sbjct: 119 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFRT 178

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGI+EAYRVLKLG KAC+IGPVYPTFWLSR+FADVWMLFPK
Sbjct: 179 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKLGAKACLIGPVYPTFWLSRFFADVWMLFPK 238

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 239 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 292


>gi|388497534|gb|AFK36833.1| unknown [Lotus japonicus]
          Length = 344

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/295 (83%), Positives = 261/295 (88%), Gaps = 9/295 (3%)

Query: 1   MASSMLNGAETFTLIRGMTP--KGSSFLASDFHGKHIPKLSLIAKPR------TVQSIKC 52
           MAS ML G E   L+   TP   G  F  SD HGK  PKLS  A  R      T+   +C
Sbjct: 1   MASVMLCGTEKLALLSTRTPYANGFGFTGSDLHGKSFPKLSFTATARVPNSRRTMVVPRC 60

Query: 53  SLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 112
           S+SA SRP+SQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM
Sbjct: 61  SVSA-SRPSSQPRFIQHKEEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 119

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           +VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF 
Sbjct: 120 IVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFR 179

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           TDYADRYVSAGSIEYWPDPQRGI+EAYRVLK+GGKAC+IGPVYPTFWLSR+FADVWMLFP
Sbjct: 180 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGPVYPTFWLSRFFADVWMLFP 239

Query: 233 KEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           KEEEYIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 240 KEEEYIEWFEKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 294


>gi|358249098|ref|NP_001240248.1| uncharacterized protein LOC100783986 [Glycine max]
 gi|255641609|gb|ACU21077.1| unknown [Glycine max]
          Length = 342

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/294 (83%), Positives = 263/294 (89%), Gaps = 9/294 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKP-------RTVQSIKCS 53
           M S ML+G E  TL R +T  G  F  SD HGK+ P++S  A         R++   KCS
Sbjct: 1   MGSVMLSGTEKLTL-RTLTGNGLGFTGSDLHGKNFPRVSFAATTSAKVPNFRSIVVPKCS 59

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +SA SRP+SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL++RNM+
Sbjct: 60  VSA-SRPSSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMI 118

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF T
Sbjct: 119 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFRT 178

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGI+EAYRVLKLGGKAC+IGPVYPTFWLSR+FADVWMLFPK
Sbjct: 179 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPK 238

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 239 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 292


>gi|345114364|gb|AEN74936.1| 2-methyl-6-phytylbenzoquinone methyltranferase 1 [Arachis hypogaea]
 gi|345114372|gb|AEN74940.1| 2-methyl-6-phytylbenzoquinone methyltranferase 1 [Arachis hypogaea]
          Length = 351

 Score =  482 bits (1240), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/302 (82%), Positives = 263/302 (87%), Gaps = 16/302 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI------PKLSLIAKPRT-------V 47
           MASSM +G E+ TL    TP G  F AS+FH K I         +   K R        V
Sbjct: 1   MASSMFSGTESLTLFSSKTPNGLCFNASNFHSKRIGFNSSTTNFNFSNKARVRHNSNRIV 60

Query: 48  QSI--KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA 105
           ++I  KCSLSA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA
Sbjct: 61  RTIVPKCSLSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPA 119

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           DLS+RNM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKI+EGD
Sbjct: 120 DLSDRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGD 179

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AEDLPF TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FA
Sbjct: 180 AEDLPFRTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACVIGPVYPTFWLSRFFA 239

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
           DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL
Sbjct: 240 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 299

Query: 286 QV 287
           Q+
Sbjct: 300 QL 301


>gi|345114368|gb|AEN74938.1| 2-methyl-6-phytylbenzoquinone methyltranferase 3 [Arachis hypogaea]
 gi|345114376|gb|AEN74942.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Arachis duranensis]
          Length = 351

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/302 (82%), Positives = 263/302 (87%), Gaps = 16/302 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI------PKLSLIAKPRT-------V 47
           MASSM +G E+ TL    TP G  F AS+FH K I         +   K R        V
Sbjct: 1   MASSMFSGTESLTLFSSKTPNGLCFNASNFHSKRIGFNSSTTNFNFSNKARVRHNSNRIV 60

Query: 48  QSI--KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA 105
           ++I  KCSLSA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA
Sbjct: 61  RTIVPKCSLSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPA 119

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           DLS+RNM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKI+EGD
Sbjct: 120 DLSDRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGD 179

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AEDLPF TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FA
Sbjct: 180 AEDLPFRTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACVIGPVYPTFWLSRFFA 239

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
           DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL
Sbjct: 240 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 299

Query: 286 QV 287
           Q+
Sbjct: 300 QL 301


>gi|345114370|gb|AEN74939.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Arachis hypogaea]
          Length = 351

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/302 (82%), Positives = 262/302 (86%), Gaps = 16/302 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI------PKLSLIAKPRT-------V 47
           MASSM +G E+ TL    TP G  F AS FH K I         +   K R        V
Sbjct: 1   MASSMFSGTESLTLFSSKTPNGLCFNASTFHSKRIGFNSSTTNFNFSNKARVRHNSNRIV 60

Query: 48  QSI--KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA 105
           ++I  KCSLSA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA
Sbjct: 61  RTIVPKCSLSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPA 119

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           DLS+RNM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKI+EGD
Sbjct: 120 DLSDRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGD 179

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AEDLPF TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FA
Sbjct: 180 AEDLPFRTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACVIGPVYPTFWLSRFFA 239

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
           DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL
Sbjct: 240 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 299

Query: 286 QV 287
           Q+
Sbjct: 300 QL 301


>gi|345114366|gb|AEN74937.1| 2-methyl-6-phytylbenzoquinone methyltranferase 2 [Arachis hypogaea]
 gi|345114374|gb|AEN74941.1| 2-methyl-6-phytylbenzoquinone methyltranferase 2 [Arachis hypogaea]
 gi|345114378|gb|AEN74943.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Arachis ipaensis]
          Length = 351

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/302 (82%), Positives = 262/302 (86%), Gaps = 16/302 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI------PKLSLIAKPRT-------V 47
           MASSM +G E+ TL    TP G  F AS FH K I         +   K R        V
Sbjct: 1   MASSMFSGTESLTLFSSKTPNGLCFNASTFHSKRIGFNSSTTNFNFSNKARVRHNSNRIV 60

Query: 48  QSI--KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA 105
           ++I  KCSLSA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA
Sbjct: 61  RTIVPKCSLSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPA 119

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           DLS+RNM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK+CKI+EGD
Sbjct: 120 DLSDRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKDCKIIEGD 179

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AEDLPF TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FA
Sbjct: 180 AEDLPFRTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACVIGPVYPTFWLSRFFA 239

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
           DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL
Sbjct: 240 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 299

Query: 286 QV 287
           Q+
Sbjct: 300 QL 301


>gi|219842172|dbj|BAH10643.1| 2-methyl-6-geranylgeranylbenzoquinone methyltranferase [Hevea
           brasiliensis]
          Length = 341

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/293 (84%), Positives = 270/293 (92%), Gaps = 8/293 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPK--GSSFLASDFHGKHIPKLSL----IAKPRTVQSIKCSL 54
           MASSML+GAE  TL++G++PK  G  F  SDFHG H P +++    I + RT+   KCSL
Sbjct: 1   MASSMLSGAENLTLMKGISPKVKGLGFSRSDFHGNHFPGVTITCSRIFRTRTMMP-KCSL 59

Query: 55  SATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
           SA SRPASQP+FIQHKKEAFWFYRFLS+VYDH+INPGHWTEDMRDDALEPADLS+RNM+V
Sbjct: 60  SA-SRPASQPKFIQHKKEAFWFYRFLSVVYDHIINPGHWTEDMRDDALEPADLSDRNMVV 118

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPFPTD
Sbjct: 119 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTD 178

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGI+EAYRVLK GGKAC+IGPV+PTFWLSR+FADVWMLFPKE
Sbjct: 179 YADRYVSAGSIEYWPDPQRGIKEAYRVLKHGGKACLIGPVHPTFWLSRFFADVWMLFPKE 238

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF+KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPA GDSPLQ+
Sbjct: 239 EEYIEWFEKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPAYGDSPLQL 291


>gi|255647470|gb|ACU24199.1| unknown [Glycine max]
          Length = 342

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/294 (82%), Positives = 261/294 (88%), Gaps = 9/294 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKP-------RTVQSIKCS 53
           MAS  L+G E  TL R +T  G  F  SD HGK+ P++S +A         R++   KCS
Sbjct: 1   MASVTLSGTEKLTL-RTLTGNGLGFTGSDLHGKNFPRVSFVATTSAKVPNFRSLVVPKCS 59

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +SA SRP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL++RNM+
Sbjct: 60  VSA-SRPTSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNMI 118

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVKHVDAKN+TILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF T
Sbjct: 119 VVDVGGGTGFTTLGIVKHVDAKNITILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFRT 178

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGI+EAYRVLKLG KAC+IGPVYPTFWLSR+ ADVWMLFPK
Sbjct: 179 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKLGAKACLIGPVYPTFWLSRFLADVWMLFPK 238

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 239 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 292


>gi|225437172|ref|XP_002281313.1| PREDICTED: 37 kDa inner envelope membrane protein, chloroplastic
           [Vitis vinifera]
          Length = 340

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/290 (83%), Positives = 267/290 (92%), Gaps = 3/290 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRT--VQSIKCSLSAT- 57
           MASSML GAE   LIRG++P G  FL SD HGKH PKL L++  R   ++++K   +A+ 
Sbjct: 1   MASSMLTGAENLKLIRGISPNGLGFLGSDVHGKHFPKLGLVSWSRNYRLKTLKARCNASV 60

Query: 58  SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDV 117
           SRPASQ RFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRDDALEPADL++RN++VVDV
Sbjct: 61  SRPASQLRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLNDRNLVVVDV 120

Query: 118 GGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYAD 177
           GGGTGFTTLGIVKHVDAKNVT+LDQSPHQLAKAK+KEPLK+C+I+EGDAEDLPFPTDYAD
Sbjct: 121 GGGTGFTTLGIVKHVDAKNVTLLDQSPHQLAKAKKKEPLKDCRIIEGDAEDLPFPTDYAD 180

Query: 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237
           RYVSAGSIEYWP+PQRGI+EAYRVLK GGKAC+IGPVYPTFWLSR+FADVWMLFPKEEEY
Sbjct: 181 RYVSAGSIEYWPEPQRGIKEAYRVLKQGGKACMIGPVYPTFWLSRFFADVWMLFPKEEEY 240

Query: 238 IEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           IEWF+KAGF DVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 IEWFEKAGFTDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 290


>gi|147787283|emb|CAN75763.1| hypothetical protein VITISV_034441 [Vitis vinifera]
          Length = 340

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/290 (83%), Positives = 266/290 (91%), Gaps = 3/290 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRT--VQSIKCSLSAT- 57
           MASSML GAE   LIRG++P G  FL SD HGKH PKL L++  R   ++++K   +A+ 
Sbjct: 1   MASSMLTGAENLKLIRGISPNGLGFLGSDVHGKHFPKLGLVSWSRNYRLKTLKARCNASV 60

Query: 58  SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDV 117
           SRPASQ RFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRDDALEPADL++RN++VVDV
Sbjct: 61  SRPASQLRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLNDRNLVVVDV 120

Query: 118 GGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYAD 177
           GGGTGFTTLGIVKHVDAKNVT+LDQSPHQLAKAK+KEPLK+C+I+EGDAEDLPFPTDYAD
Sbjct: 121 GGGTGFTTLGIVKHVDAKNVTLLDQSPHQLAKAKEKEPLKDCRIIEGDAEDLPFPTDYAD 180

Query: 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237
           RYVSAGSIEYWP+PQRGI+EAYRVLK GGKAC IGPVYPTFWLSR+FADVWMLFPKEEEY
Sbjct: 181 RYVSAGSIEYWPEPQRGIKEAYRVLKQGGKACXIGPVYPTFWLSRFFADVWMLFPKEEEY 240

Query: 238 IEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           IEWF+KAGF DVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 IEWFEKAGFTDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 290


>gi|255552017|ref|XP_002517053.1| chloroplast inner envelope protein, putative [Ricinus communis]
 gi|223543688|gb|EEF45216.1| chloroplast inner envelope protein, putative [Ricinus communis]
          Length = 341

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/292 (81%), Positives = 260/292 (89%), Gaps = 6/292 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIK-----CSLS 55
           MA+ +LNGAE     RG+TP G  F+ S+FH    PK  L++  R  QS +     CS+S
Sbjct: 1   MAAPLLNGAENLKFRRGITPAGLGFVGSNFHVSCFPKKILVSYTRNSQSSRLLAPSCSIS 60

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
            +SRPASQPRFIQHK EAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL +RNM VV
Sbjct: 61  -SSRPASQPRFIQHKTEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYDRNMTVV 119

Query: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175
           DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK PLKECKI+EGDAEDLPFPTDY
Sbjct: 120 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKAPLKECKIIEGDAEDLPFPTDY 179

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRYVSAGSIEYWPDPQRGI+EAYRVLK+GGKAC+IGPVYPTFWLSR+FADVWMLFPKEE
Sbjct: 180 ADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGPVYPTFWLSRFFADVWMLFPKEE 239

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EYIEWF++AGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 240 EYIEWFKRAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLQL 291


>gi|124429|sp|P23525.1|IN37_SPIOL RecName: Full=37 kDa inner envelope membrane protein,
           chloroplastic; AltName: Full=E37; Flags: Precursor
 gi|21228|emb|CAA40283.1| 37 kD inner envelope membrane polypeptide [Spinacia oleracea]
          Length = 344

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/294 (81%), Positives = 262/294 (89%), Gaps = 7/294 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKH-IPKLSLIAKPRTVQS------IKCS 53
           MA SMLNG +   LI G TP    F  SDF G + +P+L+L    R +++       KC+
Sbjct: 1   MACSMLNGVDKLALISGKTPNRLRFSGSDFTGSYKLPRLNLPPNSRNLRAKTLTTVTKCT 60

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           LSA+ RPASQPRFIQ+K+EAFWFYRFLSIVYD++INPGHWTEDMRD ALEPADL+NRNML
Sbjct: 61  LSASERPASQPRFIQNKQEAFWFYRFLSIVYDNIINPGHWTEDMRDVALEPADLNNRNML 120

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGI+KHVD KNVTILDQSPHQLAKAK K+PLKEC+I+EGDAEDLPFPT
Sbjct: 121 VVDVGGGTGFTTLGIIKHVDPKNVTILDQSPHQLAKAKAKKPLKECRIIEGDAEDLPFPT 180

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FADVWMLFPK
Sbjct: 181 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPK 240

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 294


>gi|227955444|gb|ACP43457.1| MPBQ/MSBQ transferase [Lactuca sativa]
          Length = 337

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/292 (81%), Positives = 263/292 (90%), Gaps = 10/292 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAK-----PRTVQSIKCSLS 55
           MASSML G +  TL    TPKG  F  SD HGK++ K++L+ +      +T+   KCS+S
Sbjct: 1   MASSMLYGGQHLTL----TPKGLGFNGSDLHGKNLLKMNLVGRNCNFRSKTLVVPKCSVS 56

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
              RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL++R+ +VV
Sbjct: 57  -VPRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNSRDSIVV 115

Query: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175
           DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLKECKI+EGDAEDLPF TDY
Sbjct: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKECKIIEGDAEDLPFKTDY 175

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRYVSAGSIEYWPDPQRGI+EAYRVLK+GGKACIIGPVYPT+WLSR+FAD+WMLFPKEE
Sbjct: 176 ADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACIIGPVYPTYWLSRFFADMWMLFPKEE 235

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EYIEWF++AGFKDV++KRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 236 EYIEWFERAGFKDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 287


>gi|224102133|ref|XP_002312559.1| predicted protein [Populus trichocarpa]
 gi|222852379|gb|EEE89926.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/292 (80%), Positives = 257/292 (88%), Gaps = 6/292 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFH-----GKHIPKLSLIAKPRTVQSIKCSLS 55
           MAS +LNG +    I G+TP G  F+ S+ H      K+I       +   + + +CSLS
Sbjct: 1   MASLLLNGPQNVNFIGGITPSGLGFVGSNLHVSCFSSKNIVPCHNRNQNSRILAPRCSLS 60

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
            ++RPASQPRFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL +R M VV
Sbjct: 61  -SARPASQPRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYDRRMTVV 119

Query: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175
           DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK+PLKECKI+EGDAEDLPFPTDY
Sbjct: 120 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKKPLKECKIIEGDAEDLPFPTDY 179

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRYVSAGSIEYWPDPQRGI+EAYRVLK+GGKACIIGPVYPTFWLSR+FADVWMLFPKEE
Sbjct: 180 ADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACIIGPVYPTFWLSRFFADVWMLFPKEE 239

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EYIEWF+KAGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 240 EYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLQL 291


>gi|325516262|gb|ADZ24709.1| methyl-6-phytyl-1,4-benzoquinone methyltransferase 2 [Solanum
           pennellii]
          Length = 338

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/289 (79%), Positives = 259/289 (89%), Gaps = 3/289 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA--KPRTVQSIKCSLSATS 58
           MASS+L+G++   L+ G++P GSSFL S+ + K +P+   +     RT++  KCSLSA S
Sbjct: 1   MASSILSGSDNVKLLSGISPSGSSFLGSELNLKCLPQKRFVNLRATRTLRPTKCSLSA-S 59

Query: 59  RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVG 118
           RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA+L  RN+ VVDVG
Sbjct: 60  RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELHARNLQVVDVG 119

Query: 119 GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADR 178
           GGTGFTTLGIVKHVDAKNVTI+DQSPHQLAKA+QKEPLKECKI+EGDAEDLPFPTD  DR
Sbjct: 120 GGTGFTTLGIVKHVDAKNVTIIDQSPHQLAKARQKEPLKECKILEGDAEDLPFPTDTFDR 179

Query: 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYI 238
           Y+SAGSIEYWPDPQRGI+EAYRVL +GG AC+IGPVYPTFWLSR+FADVWMLFPKEEEYI
Sbjct: 180 YISAGSIEYWPDPQRGIKEAYRVLTIGGVACLIGPVYPTFWLSRFFADVWMLFPKEEEYI 239

Query: 239 EWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EWF+KAGF  V+LKRIGPKWYRGVRRHGLIMGCSVTGVKP +G+SPLQ+
Sbjct: 240 EWFKKAGFTQVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPYAGESPLQL 288


>gi|325516260|gb|ADZ24708.1| 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum
           pennellii]
          Length = 339

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/290 (78%), Positives = 259/290 (89%), Gaps = 4/290 (1%)

Query: 1   MASSM-LNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIK--CSLSAT 57
           MA+S+ ++G ++ ++   ++P G  F+ SDF+G   PKL L      ++++   CS+S T
Sbjct: 1   MANSIFISGTQSLSVCNRVSPNGLGFVGSDFNGNQFPKLGLSRTSYKIKTLAPICSIS-T 59

Query: 58  SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDV 117
           SRPASQPRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL++RN+ VVDV
Sbjct: 60  SRPASQPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNDRNLTVVDV 119

Query: 118 GGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYAD 177
           GGGTGFTTLGIV+HVDAKNVTILDQSPHQLAKAK+KEPLKECKI+EGDAEDLPF TDYAD
Sbjct: 120 GGGTGFTTLGIVEHVDAKNVTILDQSPHQLAKAKEKEPLKECKIIEGDAEDLPFSTDYAD 179

Query: 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237
           RYVSAGSIEYWPDPQRGIREAYRVLK GGKAC+IGPV+PTFWLSR+FADVWMLFPKEEEY
Sbjct: 180 RYVSAGSIEYWPDPQRGIREAYRVLKPGGKACLIGPVHPTFWLSRFFADVWMLFPKEEEY 239

Query: 238 IEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           IEWF+KAGF DVQLK+IGPKWYRGVRRHGLIMGCSVTGVK   GDSPLQ+
Sbjct: 240 IEWFEKAGFTDVQLKKIGPKWYRGVRRHGLIMGCSVTGVKSTPGDSPLQL 289


>gi|80971672|gb|ABB52807.1| MPBQ/MSBQ methyltransferase 2 [Helianthus annuus]
 gi|80971674|gb|ABB52808.1| MPBQ/MSBQ methyltransferase 2 [Helianthus annuus]
 gi|80971676|gb|ABB52809.1| MPBQ/MSBQ methyltransferase 2 [Helianthus annuus]
 gi|80971678|gb|ABB52810.1| MPBQ/MSBQ methyltransferase 2 [Helianthus annuus]
 gi|80971680|gb|ABB52811.1| MPBQ/MSBQ methyltransferase 2 [Helianthus annuus]
          Length = 343

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/294 (79%), Positives = 259/294 (88%), Gaps = 8/294 (2%)

Query: 1   MASSMLNGAETFTLIRG-MTPKGSSFLASDFHGKHIP-KLSL-----IAKPRTVQSIKCS 53
           M SSML GAE   +IRG +   G  F  S+ +G+  P K++L     I++ +T+   KCS
Sbjct: 1   MTSSMLYGAENLAIIRGRVAANGLGFNGSELNGRKFPLKVNLACGNSISRGKTLVVPKCS 60

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +S   RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL +RNML
Sbjct: 61  VS-LPRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLYSRNML 119

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK VDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF T
Sbjct: 120 VVDVGGGTGFTTLGIVKSVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFKT 179

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRY+SAGSIEYWP+PQRGI+EAYRVLK+GGKAC+IGPVYPT WLSR+FAD WMLFPK
Sbjct: 180 DYADRYISAGSIEYWPEPQRGIKEAYRVLKIGGKACVIGPVYPTHWLSRFFADAWMLFPK 239

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF KAGFKDV++KRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 240 EEEYIEWFTKAGFKDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 293


>gi|225432846|ref|XP_002283783.1| PREDICTED: 37 kDa inner envelope membrane protein, chloroplastic
           [Vitis vinifera]
          Length = 340

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/291 (79%), Positives = 256/291 (87%), Gaps = 5/291 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA---KPRT-VQSIKCSLSA 56
           MAS ML+GAE+   IR + P G     SDF  +   +  L+     PRT   + KCSLS 
Sbjct: 1   MASVMLSGAESLKPIRAIAPSGIGSAGSDFPKRFSSQKGLVCYTRNPRTRTIAPKCSLS- 59

Query: 57  TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVD 116
           +SRP SQPRFIQHK+EAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL +R M VVD
Sbjct: 60  SSRPVSQPRFIQHKQEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYDRKMTVVD 119

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176
           VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLKEC+I+EGDAEDLPFPTDYA
Sbjct: 120 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKECRIIEGDAEDLPFPTDYA 179

Query: 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEE 236
           DRY+SAGSIEYWPDPQRGIREAYRVLK+GGKACIIGPVYPTFWLSR+FAD+WMLFPKEEE
Sbjct: 180 DRYISAGSIEYWPDPQRGIREAYRVLKIGGKACIIGPVYPTFWLSRFFADLWMLFPKEEE 239

Query: 237 YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           YIEWF+KAGFK+VQ+KRIGPKWYRGVRRHGLIMGCSVTG KP +GDSPLQ+
Sbjct: 240 YIEWFRKAGFKNVQIKRIGPKWYRGVRRHGLIMGCSVTGEKPFTGDSPLQL 290


>gi|147815959|emb|CAN70417.1| hypothetical protein VITISV_013813 [Vitis vinifera]
          Length = 340

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/291 (79%), Positives = 255/291 (87%), Gaps = 5/291 (1%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA---KPRT-VQSIKCSLSA 56
           MAS ML+GAE+   IR + P G     SDF  +   +  L+     PRT   + KCSLS 
Sbjct: 1   MASVMLSGAESLKPIRAIAPSGIGSAGSDFPKRFSSQKGLVCYTRNPRTRTIAPKCSLS- 59

Query: 57  TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVD 116
           +SRP SQPRFIQHK+EAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL +R M VVD
Sbjct: 60  SSRPVSQPRFIQHKQEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYDRKMTVVD 119

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176
           VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLKEC+I+EGDAEDLPFPTDYA
Sbjct: 120 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKECRIIEGDAEDLPFPTDYA 179

Query: 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEE 236
           DRY+SAGSIEYWPDPQRGIREAYRVLK+GGKACIIGPVYPTFWLSR+FAD+WMLFPKEEE
Sbjct: 180 DRYISAGSIEYWPDPQRGIREAYRVLKIGGKACIIGPVYPTFWLSRFFADLWMLFPKEEE 239

Query: 237 YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           YIEWF+KAGFK+ Q+KRIGPKWYRGVRRHGLIMGCSVTG KP +GDSPLQ+
Sbjct: 240 YIEWFRKAGFKNXQIKRIGPKWYRGVRRHGLIMGCSVTGEKPFTGDSPLQL 290


>gi|449455256|ref|XP_004145369.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Cucumis sativus]
 gi|449473843|ref|XP_004153999.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Cucumis sativus]
 gi|449520769|ref|XP_004167405.1| PREDICTED: LOW QUALITY PROTEIN: 37 kDa inner envelope membrane
           protein, chloroplastic-like [Cucumis sativus]
          Length = 337

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/293 (82%), Positives = 262/293 (89%), Gaps = 12/293 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQ-SIKCSL 54
           MAS+MLNGAE   L RG+      F  S+ HG++ PK  L++     K  TV  + KCSL
Sbjct: 1   MASAMLNGAECLKLTRGL-----GFSGSNLHGRNFPKFGLVSSFGCSKAATVSMTPKCSL 55

Query: 55  SATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
           SA SRPASQPRFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL+NRNM+V
Sbjct: 56  SA-SRPASQPRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLNNRNMIV 114

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KE LK+CKI+EGDAEDLPF TD
Sbjct: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKKKEALKDCKIIEGDAEDLPFRTD 174

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGI+EAYRVLKLGGKACIIGPVYPTFWLSR+FADVWMLFPKE
Sbjct: 175 YADRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACIIGPVYPTFWLSRFFADVWMLFPKE 234

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYI+WF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 235 EEYIQWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPYSGDSPLQL 287


>gi|15005009|dbj|BAB62076.1| APG1 [Arabidopsis thaliana]
          Length = 338

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/294 (80%), Positives = 254/294 (86%), Gaps = 14/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS MLNGA TF       PKG     S+ H K IP+ +L++      PR   + KCS S
Sbjct: 1   MASLMLNGAITF-------PKGLGSPGSNLHAKSIPRPTLLSVTRTSTPRLSVATKCSSS 53

Query: 56  ATSRPA--SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           + S     +QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct: 54  SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 287


>gi|297821266|ref|XP_002878516.1| hypothetical protein ARALYDRAFT_907927 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324354|gb|EFH54775.1| hypothetical protein ARALYDRAFT_907927 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 337

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/293 (79%), Positives = 255/293 (87%), Gaps = 13/293 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MASS+LNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS  
Sbjct: 1   MASSLLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSVTRTTTPRLSVATRCSSV 53

Query: 56  ATSRPA-SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
           ++S    +QPRFIQHKKEA+WFYRFLSIVYDH+INPGHWTEDMRDDALEPADLS+ +M V
Sbjct: 54  SSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLSHPDMRV 113

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD
Sbjct: 114 VDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 173

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+FADVWMLFPKE
Sbjct: 174 YADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFADVWMLFPKE 233

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 286


>gi|227202840|dbj|BAH56893.1| AT3G63410 [Arabidopsis thaliana]
          Length = 303

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/294 (80%), Positives = 254/294 (86%), Gaps = 14/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS MLNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS S
Sbjct: 1   MASLMLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSS 53

Query: 56  ATSRPA--SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           + S     +QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct: 54  SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV
Sbjct: 234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287


>gi|377657559|gb|AFB74213.1| chloroplast MPBQ/MSBQ methyltransferase [Brassica napus]
          Length = 337

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/293 (80%), Positives = 255/293 (87%), Gaps = 13/293 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLI---AKPRTVQSIKCSLSAT 57
           MAS MLNGA TF       PKG  F AS+ H +  P LSL+   A  R   + +CS S++
Sbjct: 1   MASLMLNGAITF-------PKGLGFPASNLHARPSPPLSLVSNTATRRLSVATRCSSSSS 53

Query: 58  SRPA---SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
              +   +QPRFIQHKKEA+WFYRFLSIVYDH+INPGHWTEDMRDDALEPADLS+ +M V
Sbjct: 54  VSASRPSAQPRFIQHKKEAYWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLSHPDMRV 113

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD
Sbjct: 114 VDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 173

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPV+PTFWLSR+FADVWMLFPKE
Sbjct: 174 YADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVHPTFWLSRFFADVWMLFPKE 233

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 286


>gi|108385436|gb|ABF85788.1| At3g63410 [Arabidopsis thaliana]
          Length = 338

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/294 (79%), Positives = 254/294 (86%), Gaps = 14/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS MLNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS S
Sbjct: 1   MASLMLNGAITF-------PKGLGSPVSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSS 53

Query: 56  ATSRPA--SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           + S     +QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct: 54  SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 287


>gi|377657561|gb|AFB74214.1| chloroplast MPBQ/MSBQ methyltransferase [Brassica napus]
          Length = 339

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/295 (80%), Positives = 256/295 (86%), Gaps = 15/295 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLI---AKPRTVQSIKCSLSAT 57
           MAS MLNGA TF       PKG  F AS+ H +  P LSL+   A  R   + +CS S++
Sbjct: 1   MASLMLNGAITF-------PKGLGFPASNLHARPSPPLSLVSNTATRRLSVATRCSSSSS 53

Query: 58  SRPA-----SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 112
           S  +     +QPRFIQHKKEA+WFYRFLSIVYDH+INPGHWTEDMRDDALEPADLS+ +M
Sbjct: 54  SSVSASRPSAQPRFIQHKKEAYWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLSHPDM 113

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
            VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP
Sbjct: 114 RVVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 173

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           TDYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPV+PTFWLSR+FADVWMLFP
Sbjct: 174 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVHPTFWLSRFFADVWMLFP 233

Query: 233 KEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           KEEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 KEEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 288


>gi|15229430|ref|NP_191900.1| MPBQ/MSBQ methyltransferase [Arabidopsis thaliana]
 gi|7573324|emb|CAB87794.1| putative chloroplast inner envelope protein [Arabidopsis thaliana]
 gi|213876765|gb|ACJ54267.1| MPBQ [Binary vector pCAMBIA1300-VE3-2S]
 gi|213876778|gb|ACJ54277.1| MPBQ [Binary vector pCAMBIA1300-VE2-VE3]
 gi|222422825|dbj|BAH19400.1| AT3G63410 [Arabidopsis thaliana]
 gi|332646957|gb|AEE80478.1| MPBQ/MSBQ methyltransferase [Arabidopsis thaliana]
          Length = 338

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/294 (79%), Positives = 254/294 (86%), Gaps = 14/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS MLNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS S
Sbjct: 1   MASLMLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSS 53

Query: 56  ATSRPA--SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           + S     +QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct: 54  SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 287


>gi|187373137|gb|ACD03289.1| MPBQ methyltransferase [Brassica napus]
          Length = 337

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/293 (80%), Positives = 254/293 (86%), Gaps = 13/293 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLI---AKPRTVQSIKCSLSAT 57
           MAS MLNGA TF       PKG  F AS+ H +  P LSL+   A  R   + +CS S++
Sbjct: 1   MASLMLNGAITF-------PKGLGFPASNLHARPSPPLSLVSNTATRRLSVATRCSSSSS 53

Query: 58  SRPA---SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
              +   +QPRFIQHKKEA+WFYRFLSIVYDH+INPGHWTEDMRDDALEPADLS+ +M V
Sbjct: 54  VSASRPSAQPRFIQHKKEAYWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLSHPDMRV 113

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVK   AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD
Sbjct: 114 VDVGGGTGFTTLGIVKTEKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 173

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPV+PTFWLSR+FADVWMLFPKE
Sbjct: 174 YADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVHPTFWLSRFFADVWMLFPKE 233

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 234 EEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 286


>gi|356500677|ref|XP_003519158.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Glycine max]
          Length = 343

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/293 (79%), Positives = 254/293 (86%), Gaps = 6/293 (2%)

Query: 1   MASSMLNGA-ETFTLIRGMTPKGSSFLASDFHGK----HIPKLSLIAKPRTVQSIKCSLS 55
           MAS MLNGA +   LI G+ P G +F       K    H  KL ++ K  T +    + S
Sbjct: 1   MASLMLNGAHQNPNLISGIAPNGLNFHNKCLFQKGVLSHGNKLRVVRKNFTPKGSMSASS 60

Query: 56  ATS-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
           ++S RP SQPRFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRD+ALEPADL NRN+ V
Sbjct: 61  SSSSRPGSQPRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYNRNLRV 120

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD
Sbjct: 121 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 180

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGI EAYRVL++GG AC+IGPV+PTFWLSR+FADVWMLFPKE
Sbjct: 181 YADRYVSAGSIEYWPDPQRGITEAYRVLRIGGIACVIGPVHPTFWLSRFFADVWMLFPKE 240

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF+KAGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 241 EEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLQL 293


>gi|21553996|gb|AAM63077.1| putative chloroplast inner envelope protein [Arabidopsis thaliana]
          Length = 338

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/294 (79%), Positives = 253/294 (86%), Gaps = 14/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS MLNGA TF       PKG     S+ H + IP+ +L++      PR   + +CS S
Sbjct: 1   MASLMLNGAITF-------PKGLGSPGSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSS 53

Query: 56  ATSRPA--SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           + S     +QPRFIQHKKEA+WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+ +M 
Sbjct: 54  SVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMR 113

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVK V AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGIREAYRVLK+GGKAC+IGPVYPTFWLSR+F+DVWMLFPK
Sbjct: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPK 233

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+ AGFKDVQLKRIGPKWYRGVRRHGLIMG SVTGVKPASGDSPLQ+
Sbjct: 234 EEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGYSVTGVKPASGDSPLQL 287


>gi|1419090|emb|CAA64422.1| 37kDa chloroplast inner envelope membrane polypeptide precursor
           [Nicotiana tabacum]
          Length = 335

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/294 (76%), Positives = 257/294 (87%), Gaps = 16/294 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLI-------AKPRTVQSIKCS 53
           MASS+L+GAE F ++ G++P       S+ H K  P+  L+        K RT+++ KCS
Sbjct: 1   MASSILSGAENFKILSGISP-------SELHIKCFPQKGLVNYSRIPNTKSRTLRT-KCS 52

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +S +SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA+L++R + 
Sbjct: 53  VS-SSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELNSRQLQ 111

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIVKHVDAKNVTI+DQSPHQLAKA++KEPLKECKI+EGDAEDLPFPT
Sbjct: 112 VVDVGGGTGFTTLGIVKHVDAKNVTIIDQSPHQLAKAREKEPLKECKILEGDAEDLPFPT 171

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           D  DRYVSAGSIEYWPDPQRGI+EAYRVL +GG AC+IGPVYPTFWLSR+FAD+WMLFPK
Sbjct: 172 DTFDRYVSAGSIEYWPDPQRGIKEAYRVLTIGGVACLIGPVYPTFWLSRFFADMWMLFPK 231

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+KAGF  V+LKRIGPKWYRGVRRHGLIMGCSVTGVKP  G+SPLQ+
Sbjct: 232 EEEYIEWFKKAGFAQVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPYFGESPLQL 285


>gi|357440561|ref|XP_003590558.1| MPBQ/MSBQ methyltransferase [Medicago truncatula]
 gi|355479606|gb|AES60809.1| MPBQ/MSBQ methyltransferase [Medicago truncatula]
          Length = 347

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/297 (79%), Positives = 258/297 (86%), Gaps = 10/297 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSF--LASDFHGKHI--PKLSLIAK------PRTVQSI 50
           MAS ML+G    T +   T  G+ F    SDF+GK +  PK S+ AK       R +   
Sbjct: 1   MASLMLSGTGKLTFLNCKTQNGNGFGLSGSDFNGKSLISPKTSINAKIRVSNLKRNIVVR 60

Query: 51  KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
             S  ++SRP+SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA+L++R
Sbjct: 61  SSSSVSSSRPSSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELTDR 120

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           NM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLK+CKIVEGDAEDLP
Sbjct: 121 NMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKDCKIVEGDAEDLP 180

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F TDYADRYVSAGSIEYWPDPQRGI+EAYRVLK GGKAC+IGPVYPTFWLSR+FADVWML
Sbjct: 181 FRTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKFGGKACLIGPVYPTFWLSRFFADVWML 240

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FPKEEEYIEWF KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 FPKEEEYIEWFTKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 297


>gi|388518413|gb|AFK47268.1| unknown [Medicago truncatula]
          Length = 347

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/297 (79%), Positives = 257/297 (86%), Gaps = 10/297 (3%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSF--LASDFHGKHI--PKLSLIAK------PRTVQSI 50
           MAS ML+G    T +   T  G+ F    SDF+GK +  PK S+ AK       R +   
Sbjct: 1   MASLMLSGTGKLTFLNCKTQNGNGFGLSGSDFNGKSLISPKTSINAKIRVSNLKRNIVVR 60

Query: 51  KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
             S  ++SRP+SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA+L++R
Sbjct: 61  SSSSVSSSRPSSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELTDR 120

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           NM+VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLK+CKIVEGDAEDLP
Sbjct: 121 NMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKDCKIVEGDAEDLP 180

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F TDYADRYVSAGSIEYWPDPQRGI+EAYRVLK GGKAC+IGPVYPTFWLSR+FAD WML
Sbjct: 181 FRTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKFGGKACLIGPVYPTFWLSRFFADDWML 240

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FPKEEEYIEWF KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 FPKEEEYIEWFTKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 297


>gi|357440559|ref|XP_003590557.1| MPBQ/MSBQ methyltransferase [Medicago truncatula]
 gi|355479605|gb|AES60808.1| MPBQ/MSBQ methyltransferase [Medicago truncatula]
          Length = 343

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/293 (79%), Positives = 255/293 (87%), Gaps = 10/293 (3%)

Query: 5   MLNGAETFTLIRGMTPKGSSF--LASDFHGKHI--PKLSLIAK------PRTVQSIKCSL 54
           ML+G    T +   T  G+ F    SDF+GK +  PK S+ AK       R +     S 
Sbjct: 1   MLSGTGKLTFLNCKTQNGNGFGLSGSDFNGKSLISPKTSINAKIRVSNLKRNIVVRSSSS 60

Query: 55  SATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
            ++SRP+SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPA+L++RNM+V
Sbjct: 61  VSSSRPSSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELTDRNMIV 120

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPLK+CKIVEGDAEDLPF TD
Sbjct: 121 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPLKDCKIVEGDAEDLPFRTD 180

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
           YADRYVSAGSIEYWPDPQRGI+EAYRVLK GGKAC+IGPVYPTFWLSR+FADVWMLFPKE
Sbjct: 181 YADRYVSAGSIEYWPDPQRGIKEAYRVLKFGGKACLIGPVYPTFWLSRFFADVWMLFPKE 240

Query: 235 EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEYIEWF KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 241 EEYIEWFTKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 293


>gi|80971664|gb|ABB52804.1| MPBQ/MSBQ methyltransferase 1 [Helianthus annuus]
 gi|80971666|gb|ABB52805.1| MPBQ/MSBQ methyltransferase 1 [Helianthus annuus]
          Length = 339

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/294 (77%), Positives = 252/294 (85%), Gaps = 12/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI--PKLSLIAKPR-----TVQSIKCS 53
           MAS ML+G +         PKG  F   D   +    PK +LI K R     T+   +CS
Sbjct: 1   MASLMLSGPQNLAF----APKGLGFKNPDLKCRSFSFPKSNLIGKSRNLGAKTLMVPRCS 56

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +S  SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L NR+++
Sbjct: 57  VS-VSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELDNRDLV 115

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIV+HVDAKNVTILDQSPHQLAKAK+K  LKEC+I+EGDAEDLPF T
Sbjct: 116 VVDVGGGTGFTTLGIVEHVDAKNVTILDQSPHQLAKAKEKVALKECRIIEGDAEDLPFET 175

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGI+EAYRV+K GGKAC+IGPVYPTFWLSR+FAD+WMLFPK
Sbjct: 176 DYADRYVSAGSIEYWPDPQRGIKEAYRVIKKGGKACLIGPVYPTFWLSRFFADMWMLFPK 235

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+KAGFKDVQ+KRIGP+WYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 236 EEEYIEWFEKAGFKDVQIKRIGPQWYRGVRRHGLIMGCSVTGVKPTSGDSPLQL 289


>gi|80971668|gb|ABB52806.1| MPBQ/MSBQ methyltransferase 1 [Helianthus annuus]
          Length = 339

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/294 (77%), Positives = 252/294 (85%), Gaps = 12/294 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHI--PKLSLIAKPRTVQSI-----KCS 53
           MAS ML+G +         PKG  F   D   +    PK +LI K R + +      +CS
Sbjct: 1   MASLMLSGPQNLAF----APKGLGFKNPDLKCRSFSFPKSNLIGKSRNLGAKTPMVPRCS 56

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           +S  SRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L NR+++
Sbjct: 57  VS-VSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELDNRDLV 115

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVDVGGGTGFTTLGIV+HVDAKNVTILDQSPHQLAKAK+K  LKEC+I+EGDAEDLPF T
Sbjct: 116 VVDVGGGTGFTTLGIVEHVDAKNVTILDQSPHQLAKAKEKVALKECRIIEGDAEDLPFET 175

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           DYADRYVSAGSIEYWPDPQRGI+EAYRV+K GGKAC+IGPVYPTFWLSR+FAD+WMLFPK
Sbjct: 176 DYADRYVSAGSIEYWPDPQRGIKEAYRVIKKGGKACLIGPVYPTFWLSRFFADMWMLFPK 235

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF+KAGFKDVQ+KRIGP+WYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 236 EEEYIEWFEKAGFKDVQIKRIGPQWYRGVRRHGLIMGCSVTGVKPTSGDSPLQL 289


>gi|356576555|ref|XP_003556396.1| PREDICTED: LOW QUALITY PROTEIN: 37 kDa inner envelope membrane
           protein, chloroplastic-like [Glycine max]
          Length = 337

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/292 (72%), Positives = 242/292 (82%), Gaps = 10/292 (3%)

Query: 1   MASSMLNGAETFTLIRG--MTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATS 58
           MA  ML+GAE+  L  G  + P G   +  +FH +   K S+++        +CS+S+ S
Sbjct: 1   MAYLMLSGAESTKLTSGSGLAPSGLGSIGLNFHKRCFFKKSVVSYGIKCVVPRCSISSLS 60

Query: 59  RPASQPRFIQHKKEAFWFYRFL-SIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDV 117
            PASQP F    KE FWFYRFL +IVYDHVINP HWTEDMRD+ALEP D+ +R M VVDV
Sbjct: 61  -PASQPGF----KEGFWFYRFLATIVYDHVINPCHWTEDMRDEALEPVDIYDRKMRVVDV 115

Query: 118 GGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKECKIVEGDAEDLPFPTDY 175
            GGT FTTLGIVKHVDAKNVTI+DQSPHQLAKA   +KEPLKECKI+EGDAEDLPFPTD 
Sbjct: 116 EGGTAFTTLGIVKHVDAKNVTIIDQSPHQLAKATKNKKEPLKECKIIEGDAEDLPFPTDC 175

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRY+SAGSIEYWPDPQRGI+EAYRVLK+GGKACIIGPVYPTFWLSR+FAD+WM+FPKEE
Sbjct: 176 ADRYISAGSIEYWPDPQRGIKEAYRVLKIGGKACIIGPVYPTFWLSRFFADMWMVFPKEE 235

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EYIEWF+KAGFKD++LKRIGPKWYRGV RHGLIMGCSVTG+KP SGDSPL++
Sbjct: 236 EYIEWFKKAGFKDIKLKRIGPKWYRGVTRHGLIMGCSVTGIKPLSGDSPLKL 287


>gi|148909277|gb|ABR17738.1| unknown [Picea sitchensis]
          Length = 361

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/225 (92%), Positives = 221/225 (98%)

Query: 63  QPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTG 122
           QPRFIQHK+EAFWFYRFLSI+YDHVINPGHWTEDMR+DALEPADL +R+++VVDVGGGTG
Sbjct: 87  QPRFIQHKQEAFWFYRFLSIIYDHVINPGHWTEDMREDALEPADLYSRDLIVVDVGGGTG 146

Query: 123 FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA 182
           FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF TDYADRYVSA
Sbjct: 147 FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFRTDYADRYVSA 206

Query: 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242
           GSIEYWPDPQRGI+EAYRVLKLGGKAC+IGPVYPTFWLSR+FAD WMLFPKEEEYIEWF 
Sbjct: 207 GSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEEYIEWFT 266

Query: 243 KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           KAGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL++
Sbjct: 267 KAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLKL 311


>gi|356535323|ref|XP_003536196.1| PREDICTED: LOW QUALITY PROTEIN: 37 kDa inner envelope membrane
           protein, chloroplastic-like [Glycine max]
          Length = 336

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/290 (69%), Positives = 237/290 (81%), Gaps = 7/290 (2%)

Query: 1   MASSMLNGAETFTLIRG--MTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATS 58
           MA  ML+GAE+  LI G  + P G   +  +FH +   K ++++      + +CS+S+ S
Sbjct: 1   MAYLMLSGAESTKLISGSGIAPSGFGSVGLNFHKRDFLKRNVVSYGNKYMTPRCSISSLS 60

Query: 59  RPASQPRFIQHKKEAFWFYRFL-SIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDV 117
            PASQP F    KEAFWFY+FL + VYDHVINP HWTEDMRD+ALE AD+ +R + +VDV
Sbjct: 61  -PASQPGF---NKEAFWFYKFLATTVYDHVINPWHWTEDMRDNALEHADVYDRKVRMVDV 116

Query: 118 GGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYAD 177
            GG  FTTLGIVKHVDAKNVTILDQSPH LAK KQKEPLKECKI+EGDAE+LPFPTDYAD
Sbjct: 117 EGGAAFTTLGIVKHVDAKNVTILDQSPHHLAKTKQKEPLKECKIIEGDAENLPFPTDYAD 176

Query: 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237
            Y+SAGSIEYWPDPQRGI+EAYRVLK+ GKACIIGPVYPTFWLSR+FAD+WM FPKEEEY
Sbjct: 177 XYISAGSIEYWPDPQRGIKEAYRVLKIRGKACIIGPVYPTFWLSRFFADMWMNFPKEEEY 236

Query: 238 IEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           +EWF KA F++++LKRIGPKWYRGV RHGL MGCSVTG+KP SGDSPL++
Sbjct: 237 LEWFXKADFRNIKLKRIGPKWYRGVTRHGLNMGCSVTGIKPLSGDSPLKL 286


>gi|302815703|ref|XP_002989532.1| hypothetical protein SELMODRAFT_130062 [Selaginella moellendorffii]
 gi|300142710|gb|EFJ09408.1| hypothetical protein SELMODRAFT_130062 [Selaginella moellendorffii]
          Length = 299

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/229 (89%), Positives = 223/229 (97%)

Query: 59  RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVG 118
           RPA QPRFIQHK+EAFWFYRFLSI+YDH+INPGHWTEDMRDDALEPADLS+RN++VVDVG
Sbjct: 21  RPAMQPRFIQHKQEAFWFYRFLSIIYDHIINPGHWTEDMRDDALEPADLSDRNLVVVDVG 80

Query: 119 GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADR 178
           GGTGFTTLGIVKHVDA+NVTILDQSPHQLAKAK+KEPLKECKI+EGDAEDLPF TDYADR
Sbjct: 81  GGTGFTTLGIVKHVDARNVTILDQSPHQLAKAKEKEPLKECKIIEGDAEDLPFGTDYADR 140

Query: 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYI 238
           YVSAGSIEYWPDPQRGI+EAYRVLK GGKAC+IGPV+PTFWLSR+FAD+WMLFPKEEEYI
Sbjct: 141 YVSAGSIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPTFWLSRFFADMWMLFPKEEEYI 200

Query: 239 EWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           +WF KAGF+DVQLKRIGPKWYRGVRRHGLIMGCSVTGVKP +GDSPL +
Sbjct: 201 DWFTKAGFQDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPEAGDSPLDL 249


>gi|302761710|ref|XP_002964277.1| hypothetical protein SELMODRAFT_230434 [Selaginella moellendorffii]
 gi|300168006|gb|EFJ34610.1| hypothetical protein SELMODRAFT_230434 [Selaginella moellendorffii]
          Length = 276

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/225 (89%), Positives = 220/225 (97%)

Query: 63  QPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTG 122
           QPRFIQHK+EAFWFYRFLSI+YDH+INPGHWTEDMRDDALEPADLS+RN++VVDVGGGTG
Sbjct: 2   QPRFIQHKQEAFWFYRFLSIIYDHIINPGHWTEDMRDDALEPADLSDRNLVVVDVGGGTG 61

Query: 123 FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA 182
           FTTLGIVKHVDA+NVTILDQSPHQLAKAK+KEPLKECKI+EGDAEDLPF TDYADRYVSA
Sbjct: 62  FTTLGIVKHVDARNVTILDQSPHQLAKAKEKEPLKECKIIEGDAEDLPFETDYADRYVSA 121

Query: 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242
           GSIEYWPDPQRGI+EAYRVLK GGKAC+IGPV+PTFWLSR+FAD+WMLFPKEEEYI+WF 
Sbjct: 122 GSIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPTFWLSRFFADMWMLFPKEEEYIDWFT 181

Query: 243 KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           KAGF+DVQLKRIGPKWYRGVRRHGLIMGCSVTGVKP +GDSPL +
Sbjct: 182 KAGFQDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPEAGDSPLDL 226


>gi|358440847|gb|AEU11048.1| 2-methyl-6-phytylbenzoquinone methyltranferase [Linum
           usitatissimum]
          Length = 250

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/216 (93%), Positives = 209/216 (96%)

Query: 72  EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH 131
           E FWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLS+R MLVVDVGGGTGFTTLGIVKH
Sbjct: 1   EGFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSDRRMLVVDVGGGTGFTTLGIVKH 60

Query: 132 VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
           VDAKNVTILDQSPHQLAKAK+KEPLK+CK V GDAEDLPF TDYADRYVSAGSIEYWPDP
Sbjct: 61  VDAKNVTILDQSPHQLAKAKEKEPLKDCKFVLGDAEDLPFKTDYADRYVSAGSIEYWPDP 120

Query: 192 QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           QRGIREAYRVLKLGGKAC+IGPVYPTFWLSR+FAD WMLFPKEEEYIEWF KAGFKDVQL
Sbjct: 121 QRGIREAYRVLKLGGKACLIGPVYPTFWLSRFFADAWMLFPKEEEYIEWFTKAGFKDVQL 180

Query: 252 KRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           KRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL++
Sbjct: 181 KRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLEL 216


>gi|218199184|gb|EEC81611.1| hypothetical protein OsI_25114 [Oryza sativa Indica Group]
          Length = 524

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/237 (83%), Positives = 220/237 (92%), Gaps = 1/237 (0%)

Query: 51  KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
           KC++S ++RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L + 
Sbjct: 239 KCAVS-SARPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELYHH 297

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
            + VVDVGGGTGFTTLGIVKHVD +NVT+LDQSPHQL KA+QK  L    I+EGDAEDLP
Sbjct: 298 GLKVVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKAALNGVNIIEGDAEDLP 357

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           +PTD  DRYVSAGSIEYWPDPQRGIREAYRVLKLGG AC+IGPV+PTFWLSR+FAD+WML
Sbjct: 358 YPTDTFDRYVSAGSIEYWPDPQRGIREAYRVLKLGGVACLIGPVHPTFWLSRFFADMWML 417

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FPKEEEYIEWFQKAGF+DV++KRIGPKWYRGVRRHGLIMGCSVTGVK +SGDSPLQ+
Sbjct: 418 FPKEEEYIEWFQKAGFQDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKRSSGDSPLQL 474


>gi|222636543|gb|EEE66675.1| hypothetical protein OsJ_23317 [Oryza sativa Japonica Group]
          Length = 537

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/237 (83%), Positives = 220/237 (92%), Gaps = 1/237 (0%)

Query: 51  KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
           KC++S ++RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L + 
Sbjct: 252 KCAVS-SARPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELYHH 310

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
            + VVDVGGGTGFTTLGIVKHVD +NVT+LDQSPHQL KA+QK  L    I+EGDAEDLP
Sbjct: 311 GLKVVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLP 370

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           +PTD  DRYVSAGSIEYWPDPQRGIREAYRVLKLGG AC+IGPV+PTFWLSR+FAD+WML
Sbjct: 371 YPTDTFDRYVSAGSIEYWPDPQRGIREAYRVLKLGGVACLIGPVHPTFWLSRFFADMWML 430

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FPKEEEYIEWFQKAGF+DV++KRIGPKWYRGVRRHGLIMGCSVTGVK +SGDSPLQ+
Sbjct: 431 FPKEEEYIEWFQKAGFQDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKRSSGDSPLQL 487


>gi|34393472|dbj|BAC83032.1| putative 37kDa chloroplast inner envelope membrane polypeptide
           precursor [Oryza sativa Japonica Group]
 gi|50509184|dbj|BAD30335.1| putative 37kDa chloroplast inner envelope membrane polypeptide
           precursor [Oryza sativa Japonica Group]
 gi|98991035|gb|ABF60542.1| As(III) methyltransferase [Oryza sativa Japonica Group]
          Length = 330

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/237 (83%), Positives = 220/237 (92%), Gaps = 1/237 (0%)

Query: 51  KCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
           KC++S ++RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L + 
Sbjct: 45  KCAVS-SARPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELYHH 103

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
            + VVDVGGGTGFTTLGIVKHVD +NVT+LDQSPHQL KA+QK  L    I+EGDAEDLP
Sbjct: 104 GLKVVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLP 163

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           +PTD  DRYVSAGSIEYWPDPQRGIREAYRVLKLGG AC+IGPV+PTFWLSR+FAD+WML
Sbjct: 164 YPTDTFDRYVSAGSIEYWPDPQRGIREAYRVLKLGGVACLIGPVHPTFWLSRFFADMWML 223

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FPKEEEYIEWFQKAGF+DV++KRIGPKWYRGVRRHGLIMGCSVTGVK +SGDSPLQ+
Sbjct: 224 FPKEEEYIEWFQKAGFQDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKRSSGDSPLQL 280


>gi|168017215|ref|XP_001761143.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687483|gb|EDQ73865.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 324

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/243 (80%), Positives = 221/243 (90%)

Query: 45  RTVQSIKCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEP 104
           R+V     S  + SRPA +PRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMR+DALEP
Sbjct: 32  RSVAVRASSNQSISRPADKPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMREDALEP 91

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG 164
           ADL++ N+ VVDVGGGTGFTTLGIVK VDAKNVTILDQSPHQL+KAK+K PLK+CKI+EG
Sbjct: 92  ADLNDPNLTVVDVGGGTGFTTLGIVKTVDAKNVTILDQSPHQLSKAKEKAPLKDCKIIEG 151

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           DAEDLPF TDYADRY+SAGSIEYWPDPQRGI EAYRVLK GGKAC+IGPV+P+FWLS++F
Sbjct: 152 DAEDLPFKTDYADRYISAGSIEYWPDPQRGITEAYRVLKKGGKACLIGPVHPSFWLSKFF 211

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSP 284
           ADVWMLFP E+EY+EWF KAGF DV++KRIGP WYRGVRRHGLIMGCSVTGVK  +G+SP
Sbjct: 212 ADVWMLFPTEDEYMEWFTKAGFTDVKIKRIGPSWYRGVRRHGLIMGCSVTGVKAEAGESP 271

Query: 285 LQV 287
           L++
Sbjct: 272 LKL 274


>gi|108862965|gb|ABA99848.2| 37 kDa inner envelope membrane protein, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
          Length = 351

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/245 (82%), Positives = 222/245 (90%), Gaps = 3/245 (1%)

Query: 46  TVQSIKCSLSATS---RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL 102
           +V  ++C+ S++S   RP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL
Sbjct: 54  SVARLRCAASSSSAAARPMSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL 113

Query: 103 EPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV 162
           EPADL +R + VVDVGGGTGFTTLGIVK VD +NVT+LDQSPHQL KA++KE LK   I+
Sbjct: 114 EPADLYSRKLRVVDVGGGTGFTTLGIVKRVDPENVTLLDQSPHQLEKAREKEALKGVTIM 173

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR 222
           EGDAEDLPFPTD  DRYVSAGSIEYWPDPQRGI+EAYRVL+LGG AC+IGPV+PTFWLSR
Sbjct: 174 EGDAEDLPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMIGPVHPTFWLSR 233

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGD 282
           +FAD+WMLFPKEEEYIEWF+KAGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVK   GD
Sbjct: 234 FFADMWMLFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKREHGD 293

Query: 283 SPLQV 287
           SPLQV
Sbjct: 294 SPLQV 298


>gi|326522965|dbj|BAJ88528.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 346

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/297 (71%), Positives = 235/297 (79%), Gaps = 13/297 (4%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQS---IKCSLSAT 57
           MAS+          IR   P G  +L     G   P L  +A  R       ++C+ +A+
Sbjct: 3   MASAHAPSGAGSLAIRPRGPAGLGYLGL---GPSRPALRPVALARRAAPSPLLRCAAAAS 59

Query: 58  S-------RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNR 110
           S       RPAS PRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL + 
Sbjct: 60  SPPAAGGARPASAPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLYSP 119

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
            + VVDVGGGTGFTTLGIV+HVD  NVT+LDQSPHQL KA+QKE LK   I+EGDAEDLP
Sbjct: 120 KLKVVDVGGGTGFTTLGIVRHVDPANVTLLDQSPHQLDKARQKEALKGVHIMEGDAEDLP 179

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           FPTD  DRYVSAGSIEYWPDPQRGI+EAYRVL+LGGKAC+IGPV+PTFWLSR+FAD+WML
Sbjct: 180 FPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGKACLIGPVHPTFWLSRFFADMWML 239

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FP EEEYI+WF KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVK  SGDSPLQ+
Sbjct: 240 FPTEEEYIDWFTKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKKESGDSPLQL 296


>gi|168003325|ref|XP_001754363.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694465|gb|EDQ80813.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 282

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/232 (84%), Positives = 220/232 (94%)

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
           + SRPA +PRFIQHK+EAFWFYRFLSIVYDHVINPGHWTEDMR+DALEPADL++ N++VV
Sbjct: 1   SLSRPADKPRFIQHKQEAFWFYRFLSIVYDHVINPGHWTEDMREDALEPADLNDPNLVVV 60

Query: 116 DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175
           DVGGGTGFTTLG+VK VDAKNVTILDQSPHQLAKAK+KEPLK+CKI+EGDAEDLPF TDY
Sbjct: 61  DVGGGTGFTTLGVVKTVDAKNVTILDQSPHQLAKAKEKEPLKDCKIIEGDAEDLPFETDY 120

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
           ADRYVSAGSIEYWPDPQRGI EAYRVLK GGKAC+IGPV+PTFWLSR+FADVWMLFP E+
Sbjct: 121 ADRYVSAGSIEYWPDPQRGITEAYRVLKKGGKACLIGPVHPTFWLSRFFADVWMLFPTED 180

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EY+EWF KAGF DV++KRIGP WYRGVRRHGLIMGCSVTG+KP SG+SPL++
Sbjct: 181 EYMEWFTKAGFTDVKIKRIGPSWYRGVRRHGLIMGCSVTGIKPESGESPLKL 232


>gi|115489574|ref|NP_001067274.1| Os12g0615400 [Oryza sativa Japonica Group]
 gi|108862964|gb|ABA99849.2| 37 kDa inner envelope membrane protein, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
 gi|113649781|dbj|BAF30293.1| Os12g0615400 [Oryza sativa Japonica Group]
 gi|125537405|gb|EAY83893.1| hypothetical protein OsI_39115 [Oryza sativa Indica Group]
 gi|125580075|gb|EAZ21221.1| hypothetical protein OsJ_36874 [Oryza sativa Japonica Group]
 gi|215706383|dbj|BAG93239.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737449|dbj|BAG96579.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740713|dbj|BAG97369.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 348

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/245 (81%), Positives = 222/245 (90%), Gaps = 3/245 (1%)

Query: 46  TVQSIKCSLSATS---RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL 102
           +V  ++C+ S++S   RP SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL
Sbjct: 54  SVARLRCAASSSSAAARPMSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL 113

Query: 103 EPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV 162
           EPADL +R + VVDVGGGTGFTTLGIVK VD +NVT+LDQSPHQL KA++KE LK   I+
Sbjct: 114 EPADLYSRKLRVVDVGGGTGFTTLGIVKRVDPENVTLLDQSPHQLEKAREKEALKGVTIM 173

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR 222
           EGDAEDLPFPTD  DRYVSAGSIEYWPDPQRGI+EAYRVL+LGG AC+IGPV+PTFWLSR
Sbjct: 174 EGDAEDLPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMIGPVHPTFWLSR 233

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGD 282
           +FAD+WMLFPKEEEYIEWF+KAGFKDV+LKRIGPKWYRGVRRHGLIMGCSVTGVK   GD
Sbjct: 234 FFADMWMLFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKREHGD 293

Query: 283 SPLQV 287
           SPLQ+
Sbjct: 294 SPLQL 298


>gi|373938267|dbj|BAL46505.1| MPBQ methyltransferase [Diospyros kaki]
          Length = 340

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/298 (71%), Positives = 231/298 (77%), Gaps = 19/298 (6%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATSR- 59
           MASS+L+GA+   L       G  FLA        P       P    S+   +  ++R 
Sbjct: 1   MASSVLSGAKVSNLQLPFPQPGHLFLA--------PMSMASPFPVGFHSLTIGVRISNRW 52

Query: 60  ----------PASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSN 109
                     P   P     +K       FLSIVYDHVINPGHWTEDMRD+ALEPADL +
Sbjct: 53  HPNAVYLPRGPLLSPGSSSTRKRRSGSTGFLSIVYDHVINPGHWTEDMRDEALEPADLFD 112

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL 169
           RN+ VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE LKEC I+EGDAEDL
Sbjct: 113 RNLRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEALKECTIMEGDAEDL 172

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           PFPTDYADRY+SAGSIEYWPDPQRGI+EAYRVLK+GGKAC+IGPVYPTFWLSR+FADVWM
Sbjct: 173 PFPTDYADRYISAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGPVYPTFWLSRFFADVWM 232

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           LFPKEEEYIEWFQKAGFKDVQLKRIGP+WYRGVRRHGLIMGCSVTGVKP SGDSPLQ+
Sbjct: 233 LFPKEEEYIEWFQKAGFKDVQLKRIGPQWYRGVRRHGLIMGCSVTGVKPLSGDSPLQL 290


>gi|231274771|emb|CAX36917.1| MPBQ methyltransferase [Triticum aestivum]
          Length = 274

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/224 (87%), Positives = 209/224 (93%)

Query: 64  PRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGF 123
           PRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL +R + VVDVGGGTGF
Sbjct: 1   PRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLYSRKLKVVDVGGGTGF 60

Query: 124 TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
           TTLGIV+HVD  NVT+LDQSPHQL KA+QKE LK   I+EGDAEDLPFPTD  DRYVSAG
Sbjct: 61  TTLGIVRHVDPANVTLLDQSPHQLEKARQKEALKGVDIMEGDAEDLPFPTDTFDRYVSAG 120

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWPDPQRGI+EAYRVL+LGGKAC+IGPV+PTFWLSR+FAD+WMLFP EEEYIEWF+K
Sbjct: 121 SIEYWPDPQRGIKEAYRVLRLGGKACLIGPVHPTFWLSRFFADMWMLFPTEEEYIEWFKK 180

Query: 244 AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVK  SGDSPLQ+
Sbjct: 181 AGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKRESGDSPLQL 224


>gi|242086276|ref|XP_002443563.1| hypothetical protein SORBIDRAFT_08g021610 [Sorghum bicolor]
 gi|241944256|gb|EES17401.1| hypothetical protein SORBIDRAFT_08g021610 [Sorghum bicolor]
          Length = 349

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/279 (72%), Positives = 229/279 (82%), Gaps = 8/279 (2%)

Query: 15  IRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATSRPASQP------RFIQ 68
           +RG  P G  FL+    G     L+L  +      ++C+ S++S  A         RFIQ
Sbjct: 23  VRG--PAGLGFLSPSKVGGLPRPLALAKRSPVAARLRCAASSSSPAAPAARPVTAPRFIQ 80

Query: 69  HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGI 128
           HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA+L +R++ VVDVGGGTGFTTLGI
Sbjct: 81  HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELYSRHLKVVDVGGGTGFTTLGI 140

Query: 129 VKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188
           VKHV+ + VT+LDQSPHQL KA+QKE LK   I+EGDAEDLPFPTD  DRY+SAGSIEYW
Sbjct: 141 VKHVNPEKVTLLDQSPHQLEKARQKEALKGVTIMEGDAEDLPFPTDSFDRYISAGSIEYW 200

Query: 189 PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKD 248
           PDPQRGI+EAYRVL+ GG AC+IGPVYPTFWLSR+FAD+WMLFPKEEEYIEWF KAGFKD
Sbjct: 201 PDPQRGIKEAYRVLRFGGLACVIGPVYPTFWLSRFFADMWMLFPKEEEYIEWFTKAGFKD 260

Query: 249 VQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           V+LKRIGPKWYRGVRRHGLIMGCSVTGVK  SGDSPL++
Sbjct: 261 VKLKRIGPKWYRGVRRHGLIMGCSVTGVKRQSGDSPLEL 299


>gi|226497048|ref|NP_001151298.1| LOC100284931 [Zea mays]
 gi|195645634|gb|ACG42285.1| inner envelope membrane protein [Zea mays]
          Length = 352

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/222 (84%), Positives = 207/222 (93%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL +R++ VVDVGGGTGFTT
Sbjct: 81  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLFSRHLTVVDVGGGTGFTT 140

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           LGIVKHV+ +NVT+LDQSPHQL KA+QKE LK   I+EGDAEDLPFPTD  DRY+SAGSI
Sbjct: 141 LGIVKHVNPENVTLLDQSPHQLDKARQKEALKGVTIMEGDAEDLPFPTDSFDRYISAGSI 200

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDPQRGI+EAYRVL+ GG AC+IGPVYPTFWLSR+FAD+WMLFPKEEEYIEWF+KAG
Sbjct: 201 EYWPDPQRGIKEAYRVLRFGGLACVIGPVYPTFWLSRFFADMWMLFPKEEEYIEWFKKAG 260

Query: 246 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           F+DV+LKRIGPKWYRGVRRHGLIMGCSVTGVK   GDSPL++
Sbjct: 261 FRDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKRERGDSPLEL 302


>gi|223949889|gb|ACN29028.1| unknown [Zea mays]
 gi|414868957|tpg|DAA47514.1| TPA: inner envelope membrane protein [Zea mays]
          Length = 350

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/222 (84%), Positives = 207/222 (93%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL +R++ VVDVGGGTGFTT
Sbjct: 79  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLFSRHLTVVDVGGGTGFTT 138

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           LGIVKHV+ +NVT+LDQSPHQL KA+QKE LK   I+EGDAEDLPFPTD  DRY+SAGSI
Sbjct: 139 LGIVKHVNPENVTLLDQSPHQLDKARQKEALKGVTIMEGDAEDLPFPTDSFDRYISAGSI 198

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDPQRGI+EAYRVL+ GG AC+IGPVYPTFWLSR+FAD+WMLFPKEEEYIEWF+KAG
Sbjct: 199 EYWPDPQRGIKEAYRVLRFGGLACVIGPVYPTFWLSRFFADMWMLFPKEEEYIEWFKKAG 258

Query: 246 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           F+DV+LKRIGPKWYRGVRRHGLIMGCSVTGVK   GDSPL++
Sbjct: 259 FRDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKRERGDSPLEL 300


>gi|357156174|ref|XP_003577366.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Brachypodium distachyon]
          Length = 350

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/222 (83%), Positives = 205/222 (92%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDAL+PADL +R + VVDVGGGTGFTT
Sbjct: 79  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALQPADLHSRKLKVVDVGGGTGFTT 138

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           LGIVKHV+ +NVT+LDQSPHQL KA+QKE L    I+EGDAEDLPFPTD  DRYVSAGSI
Sbjct: 139 LGIVKHVEPENVTLLDQSPHQLEKARQKEALNGVTIIEGDAEDLPFPTDTFDRYVSAGSI 198

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDPQRGI+EAYRVL+LGG AC+IGPV+PTFWLSR+FAD+WMLFP EEEYI+WF+KAG
Sbjct: 199 EYWPDPQRGIKEAYRVLRLGGVACLIGPVHPTFWLSRFFADMWMLFPTEEEYIDWFKKAG 258

Query: 246 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           F+DV+LKRIGPKWYRGVRRHGLIMGCSVTGVK   GDSPLQ+
Sbjct: 259 FEDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKRERGDSPLQL 300


>gi|159469113|ref|XP_001692712.1| MPBQ/MSBQ methyltransferase [Chlamydomonas reinhardtii]
 gi|37265798|gb|AAQ90413.1| MPBQ/MSBQ methyltransferase [Chlamydomonas reinhardtii]
 gi|158277965|gb|EDP03731.1| MPBQ/MSBQ methyltransferase [Chlamydomonas reinhardtii]
 gi|170716952|gb|ACB32178.1| plant-type MPBQ/MSBQ methyltransferase [Chlamydomonas reinhardtii]
          Length = 337

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 175/233 (75%), Positives = 195/233 (83%)

Query: 53  SLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 112
           S    SRP S PR +QHK EA+WFY  LS VYDH++NPGHWTEDMRDDAL PA L + N+
Sbjct: 52  STDTYSRPISAPRLVQHKSEAYWFYAGLSQVYDHIVNPGHWTEDMRDDALAPAKLDDPNL 111

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
            VVDVGGGTGF TLG+VK V  +NVT++DQSPHQLAKAK K  LK   I+EGDAEDLPFP
Sbjct: 112 KVVDVGGGTGFCTLGVVKTVKPENVTLMDQSPHQLAKAKAKPALKGVTILEGDAEDLPFP 171

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           TD  DRYVSAGSIEYWP+PQRGIREAYRV+K GG AC+IGPV+PT  +SR+FAD WMLFP
Sbjct: 172 TDTFDRYVSAGSIEYWPEPQRGIREAYRVVKEGGLACMIGPVHPTHPVSRFFADAWMLFP 231

Query: 233 KEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
            EEEYIEWF KAGF DV++ RIGPKWYRGVRRHGLIMGCSVTGVKP +GDSPL
Sbjct: 232 TEEEYIEWFTKAGFTDVKMTRIGPKWYRGVRRHGLIMGCSVTGVKPKAGDSPL 284


>gi|118488595|gb|ABK96110.1| unknown [Populus trichocarpa]
          Length = 241

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/191 (94%), Positives = 189/191 (98%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
           MRD+ALEPADLS+RN +VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL
Sbjct: 1   MRDEALEPADLSDRNTIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 60

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           K+CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGI+EAYRVLKL GKAC+IGPV+P
Sbjct: 61  KDCKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKLEGKACLIGPVHP 120

Query: 217 TFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 276
           TFWLSR+FADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV
Sbjct: 121 TFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 180

Query: 277 KPASGDSPLQV 287
           KPASGDSPLQ+
Sbjct: 181 KPASGDSPLQL 191


>gi|384252920|gb|EIE26395.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
           subellipsoidea C-169]
          Length = 334

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 173/249 (69%), Positives = 207/249 (83%), Gaps = 2/249 (0%)

Query: 41  IAKPRTVQ-SIKCSLSATSRPASQP-RFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMR 98
           + +P  ++ + KC+ SA +   S+P RFIQHKKEA +FY FLS VYD+++NPGHWT DMR
Sbjct: 35  VQRPHRIRINTKCAASAQAAAGSRPLRFIQHKKEALFFYAFLSQVYDYIVNPGHWTVDMR 94

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE 158
            +ALEPA L N  + VVDVGGGTGF T GIVK +   NV ++DQSP QLAKAK+K+ L+ 
Sbjct: 95  TEALEPAKLDNPKLKVVDVGGGTGFCTQGIVKTISPINVVLMDQSPQQLAKAKKKKDLQG 154

Query: 159 CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF 218
             IVEGDAEDLPFPTD  DRYVSAGSIEYWP+PQRGI+EAYRV+K GG AC+IGPV+PTF
Sbjct: 155 VTIVEGDAEDLPFPTDSFDRYVSAGSIEYWPEPQRGIKEAYRVIKEGGLACMIGPVHPTF 214

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKP 278
           WLSR+FAD+WMLFP E+EY EWF KAGF DV++KRIGPKWYRGVRRHGLIMGCSVTG+KP
Sbjct: 215 WLSRFFADMWMLFPTEDEYREWFTKAGFTDVKIKRIGPKWYRGVRRHGLIMGCSVTGIKP 274

Query: 279 ASGDSPLQV 287
            +GDSPL++
Sbjct: 275 KAGDSPLEM 283


>gi|297737132|emb|CBI26333.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/191 (90%), Positives = 186/191 (97%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
           MRD+ALEPADL +R M VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK+KEPL
Sbjct: 1   MRDEALEPADLYDRKMTVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKEKEPL 60

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           KEC+I+EGDAEDLPFPTDYADRY+SAGSIEYWPDPQRGIREAYRVLK+GGKACIIGPVYP
Sbjct: 61  KECRIIEGDAEDLPFPTDYADRYISAGSIEYWPDPQRGIREAYRVLKIGGKACIIGPVYP 120

Query: 217 TFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 276
           TFWLSR+FAD+WMLFPKEEEYIEWF+KAGFK+VQ+KRIGPKWYRGVRRHGLIMGCSVTG 
Sbjct: 121 TFWLSRFFADLWMLFPKEEEYIEWFRKAGFKNVQIKRIGPKWYRGVRRHGLIMGCSVTGE 180

Query: 277 KPASGDSPLQV 287
           KP +GDSPLQ+
Sbjct: 181 KPFTGDSPLQL 191


>gi|428182603|gb|EKX51463.1| hypothetical protein GUITHDRAFT_65997 [Guillardia theta CCMP2712]
          Length = 298

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 165/234 (70%), Positives = 191/234 (81%), Gaps = 1/234 (0%)

Query: 55  SATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLV 114
            A SRP  + R IQHK EAFWFYR+LSIVYD ++NPGHWTEDMR+DAL+PA L++ ++ V
Sbjct: 3   GAASRPLGKLRLIQHKAEAFWFYRYLSIVYDKIVNPGHWTEDMREDALKPAQLTSPDLDV 62

Query: 115 VDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VDVGGGTGF TLGIVK  V  + + ++DQSPHQL KA+ K+ L+   I+EGDAEDLPF T
Sbjct: 63  VDVGGGTGFCTLGIVKAGVRPEKIVLMDQSPHQLEKARAKKGLEGVTIMEGDAEDLPFET 122

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           D  DRYVSAGSIEYWPDPQRGI EAYRV+K GG AC IGPV+PTF LSR FAD+WMLFP 
Sbjct: 123 DSKDRYVSAGSIEYWPDPQRGICEAYRVVKPGGIACCIGPVHPTFPLSRIFADLWMLFPT 182

Query: 234 EEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           EEEYIEWF KAGF+DV++ RIGP WY GVRRHGLIMGCSVTG KP +G   LQ+
Sbjct: 183 EEEYIEWFTKAGFEDVKITRIGPWWYHGVRRHGLIMGCSVTGRKPEAGLPKLQL 236


>gi|296084498|emb|CBI25057.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/191 (91%), Positives = 189/191 (98%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
           MRDDALEPADL++RN++VVDVGGGTGFTTLGIVKHVDAKNVT+LDQSPHQLAKAK+KEPL
Sbjct: 1   MRDDALEPADLNDRNLVVVDVGGGTGFTTLGIVKHVDAKNVTLLDQSPHQLAKAKKKEPL 60

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           K+C+I+EGDAEDLPFPTDYADRYVSAGSIEYWP+PQRGI+EAYRVLK GGKAC+IGPVYP
Sbjct: 61  KDCRIIEGDAEDLPFPTDYADRYVSAGSIEYWPEPQRGIKEAYRVLKQGGKACMIGPVYP 120

Query: 217 TFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 276
           TFWLSR+FADVWMLFPKEEEYIEWF+KAGF DVQLKRIGPKWYRGVRRHGLIMGCSVTGV
Sbjct: 121 TFWLSRFFADVWMLFPKEEEYIEWFEKAGFTDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 180

Query: 277 KPASGDSPLQV 287
           KPASGDSPLQ+
Sbjct: 181 KPASGDSPLQL 191


>gi|302841729|ref|XP_002952409.1| hypothetical protein VOLCADRAFT_81811 [Volvox carteri f.
           nagariensis]
 gi|300262345|gb|EFJ46552.1| hypothetical protein VOLCADRAFT_81811 [Volvox carteri f.
           nagariensis]
          Length = 334

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 179/253 (70%), Positives = 207/253 (81%), Gaps = 5/253 (1%)

Query: 33  KHIPKLSLIAKPRTVQSIKCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGH 92
           +H+P   LI+K   V  ++ +    SR  + PR IQHK EA+WFY  LS VYDH++NPGH
Sbjct: 34  RHVP---LISKRSLV--LRSASETYSRDVTAPRLIQHKNEAYWFYAGLSQVYDHIVNPGH 88

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152
           WTEDMR+ AL PA L N ++ VVDVGGGTGFTTLGIVK +   NVT++DQSPHQLAKAK 
Sbjct: 89  WTEDMREAALVPAMLDNPDLKVVDVGGGTGFTTLGIVKAIKPGNVTLIDQSPHQLAKAKA 148

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           K  LK   I+EGDAEDLPF TD  DRYVSAGSIEYWP+PQRGI+EAYRV+K GG AC+IG
Sbjct: 149 KPALKGVTILEGDAEDLPFRTDSFDRYVSAGSIEYWPEPQRGIKEAYRVIKEGGVACVIG 208

Query: 213 PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCS 272
           PV+P+FWLSR+FADVWMLFPKEEEYIEWF KAGF DV++ RIGPKWYRGVRRHGLIMGCS
Sbjct: 209 PVHPSFWLSRFFADVWMLFPKEEEYIEWFTKAGFVDVKITRIGPKWYRGVRRHGLIMGCS 268

Query: 273 VTGVKPASGDSPL 285
           VTGVKP +G+SPL
Sbjct: 269 VTGVKPKAGESPL 281


>gi|307110474|gb|EFN58710.1| hypothetical protein CHLNCDRAFT_140353 [Chlorella variabilis]
          Length = 325

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 156/225 (69%), Positives = 183/225 (81%), Gaps = 1/225 (0%)

Query: 64  PRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGF 123
           PR IQHK EA  FY FLS VYD+V+NPGHWT +MR+DAL+PA L + ++ VVDVGGGTGF
Sbjct: 46  PRLIQHKNEAKAFYAFLSQVYDYVVNPGHWTTEMREDALQPAQLDSADLKVVDVGGGTGF 105

Query: 124 TTLGIVKH-VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA 182
            T G+VK  +   N+T++DQSP QLAKA+ K  LK   I+EGDAEDLPF TD  DRYVSA
Sbjct: 106 CTQGVVKAGIPPANITLIDQSPQQLAKARAKADLKGATILEGDAEDLPFETDTFDRYVSA 165

Query: 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242
           GSIEYWP+PQRGI EAYRVL+ GG AC+IGPV+PT  +SR  AD+WMLFP EEEY++WF+
Sbjct: 166 GSIEYWPEPQRGICEAYRVLRPGGVACMIGPVHPTHPISRTMADLWMLFPTEEEYLQWFK 225

Query: 243 KAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
            AGF DVQLKRIGP WYRGVRRHGLIMGCSVT  KPA+G SPL++
Sbjct: 226 AAGFADVQLKRIGPSWYRGVRRHGLIMGCSVTATKPAAGPSPLEL 270


>gi|388514971|gb|AFK45547.1| unknown [Lotus japonicus]
          Length = 200

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/162 (95%), Positives = 161/162 (99%)

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF TDYADRYVSAGSI
Sbjct: 11  LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFRTDYADRYVSAGSI 70

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDPQRGI+EAYRVLK+GGKAC+IGPVYPTFWLSR+FADVWMLFPKEEEYIEWF+KAG
Sbjct: 71  EYWPDPQRGIKEAYRVLKIGGKACLIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFEKAG 130

Query: 246 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQ+
Sbjct: 131 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQL 172


>gi|357150185|ref|XP_003575371.1| PREDICTED: 37 kDa inner envelope membrane protein,
           chloroplastic-like [Brachypodium distachyon]
          Length = 277

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 163/223 (73%), Positives = 190/223 (85%)

Query: 65  RFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFT 124
           R IQHKKEA WFY  +SI YD V NPG +T+DMRD +L  ADL +R++ VVDVGGGTGFT
Sbjct: 5   RLIQHKKEALWFYSLISIGYDEVFNPGQYTDDMRDVSLVHADLHSRSLKVVDVGGGTGFT 64

Query: 125 TLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           T+GIV++VD +NVTILDQSP QL KA++K+ L    I+EGDAEDLPFP D  DRYVSAGS
Sbjct: 65  TVGIVRYVDPENVTILDQSPDQLKKARRKKALNGVTIMEGDAEDLPFPADTFDRYVSAGS 124

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWPDPQRGI+EAYRVL +GG AC+IGPV PTFWLSR+FAD+WMLFP EEEYIEWF++A
Sbjct: 125 IEYWPDPQRGIKEAYRVLNVGGVACMIGPVRPTFWLSRFFADMWMLFPTEEEYIEWFERA 184

Query: 245 GFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           GFKDV+L RIGPKWYRG RRHGL++GC VTGVK  SGDSPL++
Sbjct: 185 GFKDVKLNRIGPKWYRGARRHGLVIGCCVTGVKRESGDSPLKL 227


>gi|242086274|ref|XP_002443562.1| hypothetical protein SORBIDRAFT_08g021580 [Sorghum bicolor]
 gi|241944255|gb|EES17400.1| hypothetical protein SORBIDRAFT_08g021580 [Sorghum bicolor]
          Length = 242

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 160/192 (83%), Positives = 177/192 (92%), Gaps = 1/192 (0%)

Query: 97  MRDDALEPADL-SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155
           MRDDALEPA L  +R++ VVDVGGGTGFTTLGIVKHVD +N+T+LDQSP QL KA+QKE 
Sbjct: 1   MRDDALEPAGLLYSRHLKVVDVGGGTGFTTLGIVKHVDPENITLLDQSPDQLQKARQKEA 60

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           LKE  I+EGDAEDLPFPTD  DRYVSAGSIEYWPDPQRGI+EAYRVL+ GG AC+IGPVY
Sbjct: 61  LKEVTIMEGDAEDLPFPTDSFDRYVSAGSIEYWPDPQRGIKEAYRVLRSGGVACVIGPVY 120

Query: 216 PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTG 275
           PTFWLSR+FAD+WMLFPKEEEYIEWFQKAGFKDV+LKRIGPKWYRGVRRHGLI+GCSVTG
Sbjct: 121 PTFWLSRFFADMWMLFPKEEEYIEWFQKAGFKDVELKRIGPKWYRGVRRHGLIIGCSVTG 180

Query: 276 VKPASGDSPLQV 287
           VK ASGDSPL++
Sbjct: 181 VKRASGDSPLKL 192


>gi|452820499|gb|EME27540.1| MPBQ/MSBQ methyltransferase [Galdieria sulphuraria]
          Length = 344

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/255 (58%), Positives = 193/255 (75%), Gaps = 10/255 (3%)

Query: 39  SLIAKPRTVQSI----KCSLSATSRPAS------QPRFIQHKKEAFWFYRFLSIVYDHVI 88
           SL++K R+   I    +C+++ T    S      +   IQHKKEAFWFYRFLSIVYD ++
Sbjct: 24  SLLSKKRSTFFILKLNRCTMNLTDASLSNMTERAKKGLIQHKKEAFWFYRFLSIVYDTIV 83

Query: 89  NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA 148
           NP HWT +MRD +L+ A+L +R++ V+D GGGTGFTT GIV++VDA N+T+LDQSPHQ+A
Sbjct: 84  NPFHWTVEMRDTSLKQAELVSRDLKVLDAGGGTGFTTEGIVQYVDAHNITLLDQSPHQMA 143

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           KAK+K  L     VEGDAE+LPFP++  DRY+SAGSIEYWP+PQRGI EAYRVL+ GG A
Sbjct: 144 KAKKKPKLSSVNFVEGDAENLPFPSNSFDRYISAGSIEYWPEPQRGISEAYRVLRCGGVA 203

Query: 209 CIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLI 268
            +IGPV  T W SR++ D+WMLFP EEEY  WFQKAGF+D+++  IGP  Y+G+R HGLI
Sbjct: 204 TVIGPVRATHWFSRFWCDLWMLFPTEEEYRYWFQKAGFEDIRVSYIGPAAYKGIREHGLI 263

Query: 269 MGCSVTGVKPASGDS 283
           MG +++G KP +G S
Sbjct: 264 MGLTISGKKPVNGPS 278


>gi|217069880|gb|ACJ83300.1| unknown [Medicago truncatula]
          Length = 206

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/207 (73%), Positives = 174/207 (84%), Gaps = 5/207 (2%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSI----KCSLSA 56
           MAS ML+GAE   LI  + P G   ++ +FH K   + ++++      +     +CS+S 
Sbjct: 1   MASLMLSGAENTKLINSIVPSGLGSVSLNFHKKCFFRNNVVSYGNKYGARNLTPRCSIS- 59

Query: 57  TSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVD 116
           ++RP+SQPRFIQHKKEAFWFYRFLSIVYDH+INPGHWTEDMRDDALEPADL +R M VVD
Sbjct: 60  SARPSSQPRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDDALEPADLYDRRMRVVD 119

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176
           VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA+AK+KE LKECKI+EGDAEDLPFPTDYA
Sbjct: 120 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLARAKKKEALKECKIIEGDAEDLPFPTDYA 179

Query: 177 DRYVSAGSIEYWPDPQRGIREAYRVLK 203
           DRYVSAGSIEYWPDPQRGI+EAYRVLK
Sbjct: 180 DRYVSAGSIEYWPDPQRGIKEAYRVLK 206


>gi|449015705|dbj|BAM79107.1| probable MPBQ/MSBQ methyltransferase [Cyanidioschyzon merolae
           strain 10D]
          Length = 356

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/246 (58%), Positives = 180/246 (73%), Gaps = 6/246 (2%)

Query: 46  TVQSIKCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPA 105
           TV+S + ++S T+ P  Q   IQHK+EAFWFYRFLS+VYD V+NP HWT +MRD +L  A
Sbjct: 52  TVRS-EGTVSVTA-PRRQQGLIQHKREAFWFYRFLSLVYDTVVNPFHWTTEMRDASLRQA 109

Query: 106 DLSNR----NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
            L       +  V+DVGGGTGF T GIV++V    VT+LDQSPHQ+  AK+K  L+    
Sbjct: 110 GLEEGRGRPDFKVLDVGGGTGFCTEGIVQYVSPSQVTLLDQSPHQMQVAKRKPSLQGVTF 169

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           V+GDAE L FPTD  DR VSAGSIEYWP+PQRGI EAYRVLK GG A IIGPV  T  +S
Sbjct: 170 VQGDAEALAFPTDSFDRVVSAGSIEYWPEPQRGIAEAYRVLKPGGLATIIGPVRATNPVS 229

Query: 222 RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASG 281
           R+F D+WMLFP EEEY  WF +AGF D+++  IGP  Y+G+R+HGLIMG ++TG KPA G
Sbjct: 230 RFFCDLWMLFPMEEEYRVWFTRAGFTDLKVSYIGPPAYKGIRQHGLIMGLTITGRKPAPG 289

Query: 282 DSPLQV 287
           ++ +Q+
Sbjct: 290 EAKIQL 295


>gi|6635349|gb|AAF19792.1|AF162209_1 37 kDa chloroplast inner envelope membrane protein [Lactuca sativa]
          Length = 194

 Score =  266 bits (680), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 148/195 (75%), Positives = 161/195 (82%), Gaps = 10/195 (5%)

Query: 1   MASSMLNGAETFTLIRGMT-PKGSSFLASDFHGKH-IPKLSLIAKPRTVQSI-------K 51
           MASSML GAE   +IRG   P G  F ASD HGK    KL+L +    ++ I       K
Sbjct: 1   MASSMLYGAENLAIIRGRAYPNGLGFNASDLHGKKSFLKLNLASGNSNLRGISKRLIVPK 60

Query: 52  CSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRN 111
           CS+S   RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL +R+
Sbjct: 61  CSVS-VPRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLYSRD 119

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           M+VVDVGGGTGFTTLGIVKHV+AKNVTILDQSPHQLAKAKQKEPLKECKI+EGDAEDLPF
Sbjct: 120 MIVVDVGGGTGFTTLGIVKHVNAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPF 179

Query: 172 PTDYADRYVSAGSIE 186
            TDYADRY+SAGSIE
Sbjct: 180 KTDYADRYISAGSIE 194


>gi|388511265|gb|AFK43694.1| unknown [Lotus japonicus]
          Length = 173

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/171 (76%), Positives = 137/171 (80%), Gaps = 9/171 (5%)

Query: 1   MASSMLNGAETFTLIRGMTP--KGSSFLASDFHGKHIPKLSLIAKPRTVQSIK------C 52
           MAS ML G E   L+   TP   G  F  SD HGK  PKLS  A  R   S +      C
Sbjct: 1   MASVMLCGTEKLALLSTRTPYANGFGFTGSDLHGKSFPKLSFTATARVPNSRRTMVVPRC 60

Query: 53  SLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 112
           S+SA SRP+SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM
Sbjct: 61  SVSA-SRPSSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM 119

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE 163
           +VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI+E
Sbjct: 120 IVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE 170


>gi|326509177|dbj|BAJ86981.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 198

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/108 (84%), Positives = 100/108 (92%)

Query: 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIE 239
           V   SIEYWPDPQRGI+EAYRV+K GG AC+IGPV+PTFWLSR+FAD+WMLFP EEEYIE
Sbjct: 41  VLFSSIEYWPDPQRGIKEAYRVVKPGGLACLIGPVHPTFWLSRFFADMWMLFPTEEEYIE 100

Query: 240 WFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQV 287
           WF KAGF+DV+LKRIGPKWYRGVRRHGLIMGCSVTGVK ASGDSPLQ+
Sbjct: 101 WFTKAGFEDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKRASGDSPLQL 148


>gi|326494036|dbj|BAJ85480.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 174

 Score =  196 bits (499), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 105/132 (79%), Positives = 115/132 (87%), Gaps = 1/132 (0%)

Query: 52  CSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRN 111
           C++S+ S P SQPRFIQHKKEAFWFYRFLS+VYDHVINPGHWTEDMRDDALEPA+L N  
Sbjct: 43  CAVSSAS-PVSQPRFIQHKKEAFWFYRFLSVVYDHVINPGHWTEDMRDDALEPAELYNNE 101

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
             VVDVGGGTGFTTLGIVKHVD  +VT+LDQSPHQ+ KA+QKE LK   I+EGDAEDLPF
Sbjct: 102 FKVVDVGGGTGFTTLGIVKHVDNDHVTLLDQSPHQIEKARQKEALKGVSIMEGDAEDLPF 161

Query: 172 PTDYADRYVSAG 183
           PTD  DRYVSAG
Sbjct: 162 PTDTFDRYVSAG 173


>gi|414868956|tpg|DAA47513.1| TPA: hypothetical protein ZEAMMB73_614002, partial [Zea mays]
          Length = 224

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/133 (77%), Positives = 112/133 (84%), Gaps = 9/133 (6%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADL +R++ VVDVGGGTGFTT
Sbjct: 79  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLFSRHLTVVDVGGGTGFTT 138

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAG-- 183
           LGIVKHV+ +NVT+LDQSPHQL KA+QKE LK   I+EGDAEDLPFPTD  DRY+SAG  
Sbjct: 139 LGIVKHVNPENVTLLDQSPHQLDKARQKEALKGVTIMEGDAEDLPFPTDSFDRYISAGRS 198

Query: 184 -------SIEYWP 189
                  SI Y P
Sbjct: 199 LLVLPCRSIRYCP 211


>gi|448398909|ref|ZP_21570254.1| Methyltransferase type 11 [Haloterrigena limicola JCM 13563]
 gi|445669981|gb|ELZ22586.1| Methyltransferase type 11 [Haloterrigena limicola JCM 13563]
          Length = 207

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 121/195 (62%), Gaps = 6/195 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD V NP  WTE+MRDDAL   D+    M V+DVG GTGF T
Sbjct: 3   LLENKARARLFYKYLSRVYDQV-NPFIWTEEMRDDALSLLDIEEE-MTVLDVGCGTGFAT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
            G+++HVD   V  LDQS HQL +A +K  +         GDAE LPF TD  D   S+G
Sbjct: 61  EGLLEHVD--EVYALDQSEHQLEQAYEKFGKHAPPVHFHRGDAERLPFATDTFDVVWSSG 118

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E  + F+ 
Sbjct: 119 SIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADQMFKT 178

Query: 244 AGFKDVQLKRIGPKW 258
           AGF+DV+   +GP +
Sbjct: 179 AGFEDVKHAFMGPSY 193


>gi|336253225|ref|YP_004596332.1| type 11 methyltransferase [Halopiger xanaduensis SH-6]
 gi|335337214|gb|AEH36453.1| Methyltransferase type 11 [Halopiger xanaduensis SH-6]
          Length = 207

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/194 (48%), Positives = 121/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  WTE+MR DAL   DL + +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWTEEMRADALGLLDLED-DMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEQAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   L++Y AD  MLF  E E    F+ A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVLAQYLADSIMLFYDEYEADAMFKTA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|289581053|ref|YP_003479519.1| type 11 methyltransferase [Natrialba magadii ATCC 43099]
 gi|448284722|ref|ZP_21475978.1| type 11 methyltransferase [Natrialba magadii ATCC 43099]
 gi|289530606|gb|ADD04957.1| Methyltransferase type 11 [Natrialba magadii ATCC 43099]
 gi|445569432|gb|ELY24005.1| type 11 methyltransferase [Natrialba magadii ATCC 43099]
          Length = 207

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 121/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W EDMR DAL   DL   +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEDMRADALSLLDLE-EDMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HV+   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVE--EVYALDQSEHQLEQAYAKFGKHAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   ++++ AD  MLF  E E  E F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVAQHLADSIMLFYDEYEADEMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   IGP +
Sbjct: 180 GFEDVKHAFIGPSY 193


>gi|448357603|ref|ZP_21546300.1| type 11 methyltransferase [Natrialba chahannaoensis JCM 10990]
 gi|445648496|gb|ELZ01450.1| type 11 methyltransferase [Natrialba chahannaoensis JCM 10990]
          Length = 207

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/194 (47%), Positives = 121/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W EDMR DAL   DL   +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEDMRADALSLLDLE-EDMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HV+   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVE--EVYALDQSEHQLEQAYAKFGKHAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   ++++ AD  MLF  E E  E F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVIAQHLADSIMLFYDEYEADEMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|327400369|ref|YP_004341208.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6]
 gi|327315877|gb|AEA46493.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6]
          Length = 205

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 122/193 (63%), Gaps = 4/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ KK A  FY++ S +YD V NP  ++++MR   ++ A++ + +  V++VG GTGFTT 
Sbjct: 4   LEDKKRARIFYKYFSKIYDRV-NPFFYSDEMRKTVVDMAEVHSGDT-VLEVGCGTGFTTA 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
            IV+ V  +NV  +D +P Q+ KA  + P      + GDAE+LPF     D  +SAGSIE
Sbjct: 62  EIVRRVGEENVVAVDLTPEQMEKAVARFP--SATFLRGDAENLPFRDGCFDAAISAGSIE 119

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
           YWP+PQ+GI E  RV K GG+  I+ P  P  +L+R FA+  MLFP  ++ + WF KAG 
Sbjct: 120 YWPNPQKGIEEMARVTKSGGRIVILAPRKPDSFLARKFAESIMLFPSTQQCVAWFNKAGL 179

Query: 247 KDVQLKRIGPKWY 259
           +D++   +GP ++
Sbjct: 180 EDIRYVEMGPYFF 192


>gi|448353693|ref|ZP_21542467.1| type 11 methyltransferase [Natrialba hulunbeirensis JCM 10989]
 gi|445639730|gb|ELY92829.1| type 11 methyltransferase [Natrialba hulunbeirensis JCM 10989]
          Length = 207

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W EDMR DAL   D    +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEDMRADALSLLDFE-EDMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HV+   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVE--EVYALDQSEHQLEQAYAKFGKHAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   ++++ AD  MLF  E E  E F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVAQHLADSIMLFYDEYEADEMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|11498123|ref|NP_069348.1| chloroplast inner envelope membrane protein [Archaeoglobus fulgidus
           DSM 4304]
 gi|2650105|gb|AAB90718.1| chloroplast inner envelope membrane protein [Archaeoglobus fulgidus
           DSM 4304]
          Length = 205

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 4/190 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ KK A  FYR+ S +YD+ INP  +++ MR   ++ AD+   + LV++VG GTGFTT 
Sbjct: 4   LEDKKRARIFYRYFSKIYDY-INPIFYSDKMRKTVVDMADIDAES-LVLEVGCGTGFTTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
            IV+ +  + V  +D +P Q+ KA+ K  +       GDAE+LPF  +  D  +SAGSIE
Sbjct: 62  EIVRRIGEERVVAVDITPEQMMKARAK--MGGVNYFLGDAENLPFKDNSFDAAISAGSIE 119

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
           YWP+PQRGI E  RV K GGK  I+ P  P  +  R FA+  MLFP  ++ + WF KAG 
Sbjct: 120 YWPNPQRGIEEMARVTKSGGKVVILAPRKPDNFAVRKFAESIMLFPSTQQCVYWFMKAGL 179

Query: 247 KDVQLKRIGP 256
           +D++    GP
Sbjct: 180 EDIRFVETGP 189


>gi|448390215|ref|ZP_21565995.1| methyltransferase type 11 [Haloterrigena salina JCM 13891]
 gi|445667543|gb|ELZ20185.1| methyltransferase type 11 [Haloterrigena salina JCM 13891]
          Length = 207

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 121/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR +AL+  DL +  M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRTEALDLLDLES-EMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEQAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP  +L++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDAFLAQKLADSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|448308219|ref|ZP_21498098.1| methyltransferase type 11 [Natronorubrum bangense JCM 10635]
 gi|445594329|gb|ELY48491.1| methyltransferase type 11 [Natronorubrum bangense JCM 10635]
          Length = 207

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E+MR +ALE  DL N +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQ-INPFIWNEEMRTEALELLDLEN-DMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   +  LDQS HQL KA  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EIYALDQSEHQLEKAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVIAQKLADSIMLFYDEYEADRMFKEA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+    GP +
Sbjct: 180 GFEDVKHMFQGPSY 193


>gi|397774537|ref|YP_006542083.1| Methyltransferase type 11 [Natrinema sp. J7-2]
 gi|448341922|ref|ZP_21530876.1| Methyltransferase type 11 [Natrinema gari JCM 14663]
 gi|397683630|gb|AFO58007.1| Methyltransferase type 11 [Natrinema sp. J7-2]
 gi|445626632|gb|ELY79974.1| Methyltransferase type 11 [Natrinema gari JCM 14663]
          Length = 207

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 122/195 (62%), Gaps = 6/195 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD V NP  WTE+MR +AL   ++ + +M V+DVG GTGF T
Sbjct: 3   LLENKARARLFYKYLSRVYDQV-NPFIWTEEMRTEALSLLEIED-DMTVLDVGSGTGFAT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
            G+++HVD   V  LDQS HQL +A +K  +     +   GDAE LPF TD  D   S+G
Sbjct: 61  EGLLEHVD--EVYALDQSEHQLEQAYEKFGKRAPPVQFHRGDAERLPFATDTFDIVWSSG 118

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F+ 
Sbjct: 119 SIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADRMFKA 178

Query: 244 AGFKDVQLKRIGPKW 258
           AGF+DV+   +GP +
Sbjct: 179 AGFEDVKHAFMGPSY 193


>gi|383621007|ref|ZP_09947413.1| type 11 methyltransferase [Halobiforma lacisalsi AJ5]
 gi|448692492|ref|ZP_21696331.1| type 11 methyltransferase [Halobiforma lacisalsi AJ5]
 gi|445787504|gb|EMA38245.1| type 11 methyltransferase [Halobiforma lacisalsi AJ5]
          Length = 207

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR DALE  +  + +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRADALELLEFED-DMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A +K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYGLDQSRHQLEQAYEKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP  +L++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDSFLAQRLADSIMLFYDEYEADAMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|448299792|ref|ZP_21489799.1| type 11 methyltransferase [Natronorubrum tibetense GA33]
 gi|445586946|gb|ELY41214.1| type 11 methyltransferase [Natronorubrum tibetense GA33]
          Length = 207

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W EDMR DALE  +L +  M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEDMRADALELLNL-DEGMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEQAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP  ++++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDSFVAQKLADSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+    GP +
Sbjct: 180 GFEDVKHLFQGPSY 193


>gi|448720312|ref|ZP_21703292.1| type 11 methyltransferase [Halobiforma nitratireducens JCM 10879]
 gi|445782363|gb|EMA33209.1| type 11 methyltransferase [Halobiforma nitratireducens JCM 10879]
          Length = 207

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR +ALE  +  + +M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDQV-NPFIWNEEMRAEALELLEFED-DMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A +K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYGLDQSRHQLEQAYEKFGKHAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP  +L++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDSFLAQRLADSIMLFYDEYEADAMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|448347556|ref|ZP_21536427.1| Methyltransferase type 11 [Natrinema altunense JCM 12890]
 gi|445630258|gb|ELY83524.1| Methyltransferase type 11 [Natrinema altunense JCM 12890]
          Length = 207

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 121/195 (62%), Gaps = 6/195 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD V NP  WTE+MR +AL   ++ + +M V+DVG GTGF T
Sbjct: 3   LLENKARARLFYKYLSRVYDQV-NPFIWTEEMRTEALSLLEIED-DMTVLDVGSGTGFAT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
            G+++HVD   V  LDQS HQL +A +K  +         GDAE LPF TD  D   S+G
Sbjct: 61  EGLLEHVD--EVYALDQSEHQLEQAYEKFGKRAPPVHFHRGDAERLPFATDTFDIVWSSG 118

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F+ 
Sbjct: 119 SIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADRMFKT 178

Query: 244 AGFKDVQLKRIGPKW 258
           AGF+DV+   +GP +
Sbjct: 179 AGFEDVKHAFMGPSY 193


>gi|448336272|ref|ZP_21525376.1| Methyltransferase type 11 [Natrinema pallidum DSM 3751]
 gi|445629470|gb|ELY82751.1| Methyltransferase type 11 [Natrinema pallidum DSM 3751]
          Length = 207

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 6/195 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD V NP  WTE MR +AL   ++ + +M V+DVG GTGF T
Sbjct: 3   LLENKARARLFYKYLSRVYDQV-NPFIWTEAMRTEALSLLEIED-DMTVLDVGSGTGFAT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
            G+++HVD   V  LDQS HQL +A +K  +         GDAE LPF TD  D   S+G
Sbjct: 61  EGLLEHVD--EVYALDQSEHQLEQAYEKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSG 118

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F+ 
Sbjct: 119 SIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADHMFKT 178

Query: 244 AGFKDVQLKRIGPKW 258
           AGF+DV+   +GP +
Sbjct: 179 AGFEDVKHAFMGPSY 193


>gi|284166604|ref|YP_003404883.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
 gi|284016259|gb|ADB62210.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
          Length = 207

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR  AL+  DL +  M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRTAALDLLDLESE-MTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K   +        GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEQAYAKFGKRSPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHAFMGPSY 193


>gi|433589720|ref|YP_007279216.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Natrinema pellirubrum DSM 15624]
 gi|448332686|ref|ZP_21521915.1| Methyltransferase type 11 [Natrinema pellirubrum DSM 15624]
 gi|448379017|ref|ZP_21560981.1| Methyltransferase type 11 [Haloterrigena thermotolerans DSM 11522]
 gi|433304500|gb|AGB30312.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Natrinema pellirubrum DSM 15624]
 gi|445625661|gb|ELY79016.1| Methyltransferase type 11 [Natrinema pellirubrum DSM 15624]
 gi|445665579|gb|ELZ18255.1| Methyltransferase type 11 [Haloterrigena thermotolerans DSM 11522]
          Length = 207

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/195 (46%), Positives = 120/195 (61%), Gaps = 6/195 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD V NP  WTE+MR +AL   +L   +M V+DVG GTGF T
Sbjct: 3   LLENKARARLFYKYLSRVYDQV-NPFVWTEEMRTEALSLLELEA-DMTVLDVGCGTGFAT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAG 183
            G+++HVD   V  LDQS HQL +A +K   +        GDAE LPF TD  D   S+G
Sbjct: 61  EGLLEHVD--EVYALDQSEHQLEQAYEKFGKRGPPVHFHRGDAERLPFATDTFDVVWSSG 118

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F+ 
Sbjct: 119 SIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADRMFKA 178

Query: 244 AGFKDVQLKRIGPKW 258
           AGF+DV+   +GP +
Sbjct: 179 AGFEDVKHAFMGPSY 193


>gi|288931001|ref|YP_003435061.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
 gi|288893249|gb|ADC64786.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
          Length = 205

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 123/193 (63%), Gaps = 4/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K+ A +FY++ S +YD+V NP  ++ +MR   ++ A++   + LV++VG GTGFTT 
Sbjct: 4   LEDKRRARFFYKYFSKIYDYV-NPIFYSLEMRKKVVDLAEIGQGD-LVLEVGCGTGFTTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
            IV  V  +NV  +D +P Q+ KA ++   K+   V GDAE+LPF  +  D  +SAGSIE
Sbjct: 62  EIVARVGEENVVAVDITPEQMRKAVER--FKKTFFVRGDAENLPFKDNSFDASISAGSIE 119

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
           YWP+P +GI+E  RV K GG+  I+ P  P   + R FA+  MLFP  ++ + WF+KAG 
Sbjct: 120 YWPNPVKGIKEMARVTKPGGRVVILAPRKPDNPIVRKFAESIMLFPSTQQLVLWFEKAGL 179

Query: 247 KDVQLKRIGPKWY 259
            D+++   GP ++
Sbjct: 180 NDLRVVETGPYFF 192


>gi|435847760|ref|YP_007310010.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Natronococcus occultus SP4]
 gi|433674028|gb|AGB38220.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Natronococcus occultus SP4]
          Length = 207

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MR DALE  DL   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDR-INPFIWNEQMRTDALELLDLEPEST-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HV+   V  LDQS HQL +A  K   +        GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVE--EVYALDQSEHQLEQAYAKFGKRSPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDSPIAQRLADAMMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP++
Sbjct: 180 GFEDVRHAFMGPEY 193


>gi|448328828|ref|ZP_21518134.1| Methyltransferase type 11 [Natrinema versiforme JCM 10478]
 gi|445615132|gb|ELY68791.1| Methyltransferase type 11 [Natrinema versiforme JCM 10478]
          Length = 207

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/197 (46%), Positives = 120/197 (60%), Gaps = 12/197 (6%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  WTEDMR +AL   D  + +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSRVYDQV-NPFIWTEDMRTEALSLLDFED-DTTVLDVGCGTGFATD 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKA-----KQKEPLKECKIVEGDAEDLPFPTDYADRYVS 181
           G+++ VD   V  LDQS HQL +A     KQ  P+   +   GDAE LPF TD  D   S
Sbjct: 62  GLLERVD--EVYALDQSEHQLEQAYDKFGKQAPPVHFHR---GDAERLPFATDTFDVVWS 116

Query: 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWF 241
           +GSIEYWP+P   +RE  RVLK GG+  ++GP YP   +S+  AD  MLF  E E    F
Sbjct: 117 SGSIEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVVSQLLADSIMLFYDEYEADRMF 176

Query: 242 QKAGFKDVQLKRIGPKW 258
           + AGF+DV+   +GP +
Sbjct: 177 KTAGFEDVKHAFMGPSY 193


>gi|448304490|ref|ZP_21494428.1| methyltransferase type 11 [Natronorubrum sulfidifaciens JCM 14089]
 gi|445590923|gb|ELY45135.1| methyltransferase type 11 [Natronorubrum sulfidifaciens JCM 14089]
          Length = 207

 Score =  151 bits (381), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 118/194 (60%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E+MR +ALE  +  +  M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQ-INPFIWNEEMRTEALELLEFEDE-MTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL KA  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEKAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVIAQKLADSIMLFYDEYEADRMFKEA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+    GP +
Sbjct: 180 GFEDVKHMFQGPAY 193


>gi|433639538|ref|YP_007285298.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halovivax ruber XH-70]
 gi|433291342|gb|AGB17165.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halovivax ruber XH-70]
          Length = 206

 Score =  150 bits (379), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 5/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A +FY++LS VYD V NP  W E+MR +AL+  D      LV+DVG GTGF T 
Sbjct: 4   LENKARARFFYKYLSRVYDQV-NPFIWNEEMRTEALDLLDFDGEP-LVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL +A  K   +       GDAE LPF ++  D   S+GSI
Sbjct: 62  GLLEHVD--RVVALDQSPHQLQQAYGKFGKRGPVDFHLGDAERLPFASNTFDIVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP P R +RE  RVL  GG+  ++GP YP   +++  AD  MLF  E +    F KAG
Sbjct: 120 EYWPQPVRTLREIRRVLVPGGQVLVVGPNYPDHTITQKLADAIMLFYDEADADRMFTKAG 179

Query: 246 FKDVQLKRIGPKW 258
           F+DV+   +GP +
Sbjct: 180 FEDVEHVLMGPSY 192


>gi|284161988|ref|YP_003400611.1| methyltransferase type 11 [Archaeoglobus profundus DSM 5631]
 gi|284011985|gb|ADB57938.1| Methyltransferase type 11 [Archaeoglobus profundus DSM 5631]
          Length = 205

 Score =  150 bits (378), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +  KK A  FY++ S +YD ++NP  ++E+MR   ++ A++   + LV++VG GTGFTT
Sbjct: 3   LLDDKKRARTFYKYFSKIYD-LVNPFFYSEEMRKTVVDMAEIDEGD-LVLEVGCGTGFTT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
             IV+ V  +NV  +D +P Q+ KA  + P  +   + GDAE+LPF  +  D  +SAGSI
Sbjct: 61  YEIVRRVGEENVIAVDLTPEQMVKAIARFP--KANFLRGDAENLPFKDNTFDASISAGSI 118

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP P  GI+E  RV K GG+  I+ P  P   + R FA+  MLFP  ++ + WF KAG
Sbjct: 119 EYWPHPVLGIQEMARVTKPGGRVVILAPRKPDNPIFRKFAESIMLFPSTQQCVAWFLKAG 178

Query: 246 FKDVQLKRIGP 256
            +D++   +GP
Sbjct: 179 LEDIRYVEMGP 189


>gi|448361268|ref|ZP_21549889.1| type 11 methyltransferase [Natrialba asiatica DSM 12278]
 gi|445651078|gb|ELZ03988.1| type 11 methyltransferase [Natrialba asiatica DSM 12278]
          Length = 207

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/194 (44%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR+DAL   +  +  M V+D+G GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDRV-NPFIWNEEMREDALSLLEF-DSEMTVLDLGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV--EGDAEDLPFPTDYADRYVSAGS 184
           G++ HV+   V  LDQS HQL +A  K   +   I    GDAE LPF +D  D   S+GS
Sbjct: 62  GLLDHVE--EVYALDQSSHQLEQAYAKFGKRAPPIHFHRGDAERLPFASDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   L++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREIRRVLKPGGQVLVVGPNYPDNVLAQRLADSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF++V+   +GP +
Sbjct: 180 GFEEVKHAFLGPSY 193


>gi|448368414|ref|ZP_21555366.1| type 11 methyltransferase [Natrialba aegyptia DSM 13077]
 gi|445652244|gb|ELZ05144.1| type 11 methyltransferase [Natrialba aegyptia DSM 13077]
          Length = 207

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/194 (44%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR+DAL   +  +  M V+D+G GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDQV-NPFIWNEEMREDALSLLEFDSE-MTVLDLGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV--EGDAEDLPFPTDYADRYVSAGS 184
           G++ HV+   V  LDQS HQL +A  K   +   I    GDAE LPF +D  D   S+GS
Sbjct: 62  GLLDHVE--EVYALDQSNHQLEQAYAKFGKRAPPIHFHRGDAERLPFASDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   L++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREIRRVLKPGGQVLVVGPNYPDNVLAQRLADSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF++V+   +GP +
Sbjct: 180 GFENVKHAFLGPSY 193


>gi|448376892|ref|ZP_21559892.1| methyltransferase type 11 [Halovivax asiaticus JCM 14624]
 gi|445656628|gb|ELZ09462.1| methyltransferase type 11 [Halovivax asiaticus JCM 14624]
          Length = 206

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 5/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A +FY++LS VYD V NP  W E+MR +AL+  D  +    V+DVG GTGF T 
Sbjct: 4   LENKARARFFYKYLSRVYDRV-NPFIWNEEMRTEALDLLDFDDEPR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL +A  K   +       GDAE LPF ++  D   S+GSI
Sbjct: 62  GLLEHVD--RVVALDQSPHQLQQAYGKFGKRGPVDFHLGDAERLPFASNTFDIVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP P R +RE  RVL  GG+  ++GP YP   +++  AD  MLF  E +    F KAG
Sbjct: 120 EYWPQPVRTLREIRRVLVPGGQVLVVGPNYPDHTITQKLADAIMLFYDEADADRMFTKAG 179

Query: 246 FKDVQLKRIGPKW 258
           F+DV+   +GP +
Sbjct: 180 FEDVEHVLMGPSY 192


>gi|448319636|ref|ZP_21509132.1| methyltransferase type 11 [Natronococcus amylolyticus DSM 10524]
 gi|445607629|gb|ELY61509.1| methyltransferase type 11 [Natronococcus amylolyticus DSM 10524]
          Length = 207

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MR +ALE  +       V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDR-INPFIWNEQMRSEALELLEFEP-GATVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVDA  V  +DQS HQL +A  K  +         GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVDA--VYAVDQSEHQLEQAYAKFGKRAPPVHFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +++  AD  MLF  E E    F+ A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPENPIAQRLADAMMLFYDEYEADRMFKAA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP++
Sbjct: 180 GFEDVRHAFMGPEY 193


>gi|448349205|ref|ZP_21538048.1| type 11 methyltransferase [Natrialba taiwanensis DSM 12281]
 gi|445640991|gb|ELY94075.1| type 11 methyltransferase [Natrialba taiwanensis DSM 12281]
          Length = 207

 Score =  147 bits (371), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/194 (44%), Positives = 117/194 (60%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MR+DAL   +  +  M V+D+G GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDQV-NPFIWNEEMREDALSLLEFDSE-MTVLDLGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV--EGDAEDLPFPTDYADRYVSAGS 184
           G++ HV+   V  LDQS HQL +A  K   +   I    GDAE LPF +D  D   S+GS
Sbjct: 62  GLLDHVE--EVYALDQSNHQLEQAYAKFGKRAPPIHFHRGDAERLPFASDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   L++   D  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREIRRVLKPGGQVLVVGPNYPDNVLAQRLVDSIMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF +V+   +GP +
Sbjct: 180 GFDNVKHAFLGPSY 193


>gi|429191937|ref|YP_007177615.1| methylase [Natronobacterium gregoryi SP2]
 gi|448324822|ref|ZP_21514233.1| type 11 methyltransferase [Natronobacterium gregoryi SP2]
 gi|429136155|gb|AFZ73166.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Natronobacterium gregoryi SP2]
 gi|445617511|gb|ELY71108.1| type 11 methyltransferase [Natronobacterium gregoryi SP2]
          Length = 207

 Score =  147 bits (370), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E+MR +ALE        M V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQ-INPFIWNEEMRTEALE-LLDLEEEMTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K  +         GDAE LPF T+  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLGQAYDKFGKRAPPVHFHRGDAERLPFATETFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE +RVLK GG+  ++GP YP  +L++  AD  MLF  E E  E F+ A
Sbjct: 120 IEYWPNPILALREFHRVLKPGGQVLVVGPNYPDNFLAQRLADSIMLFYDEYEADEMFKTA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP +
Sbjct: 180 GFEDVKHALMGPSY 193


>gi|448313009|ref|ZP_21502738.1| methyltransferase type 11 [Natronolimnobius innermongolicus JCM
           12255]
 gi|445599582|gb|ELY53613.1| methyltransferase type 11 [Natronolimnobius innermongolicus JCM
           12255]
          Length = 207

 Score =  146 bits (369), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 115/194 (59%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E MR +AL   DL      V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEQMRSEALSLLDLEAETT-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A +K   +        GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVHALDQSEHQLEQAYEKFGKRGPPVHFHRGDAERLPFGTDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   L+   AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNVLAGKLADSIMLFYDEYEADRMFKEA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+    GP +
Sbjct: 180 GFEDVKHLFQGPSY 193


>gi|448689675|ref|ZP_21695259.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           japonica DSM 6131]
 gi|445777946|gb|EMA28906.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           japonica DSM 6131]
          Length = 206

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DLS  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLSPDDK-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL+KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDDSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F +AG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTEAG 179

Query: 246 FKDVQ 250
           F++ +
Sbjct: 180 FEEFE 184


>gi|55379714|ref|YP_137564.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           marismortui ATCC 43049]
 gi|55232439|gb|AAV47858.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           marismortui ATCC 43049]
          Length = 206

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DLS  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLSPDDK-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL+KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDDSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F KAG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTKAG 179

Query: 246 FKDVQ 250
           +++ +
Sbjct: 180 YEEFE 184


>gi|322367983|ref|ZP_08042552.1| Methyltransferase type 11 [Haladaptatus paucihalophilus DX253]
 gi|320551999|gb|EFW93644.1| Methyltransferase type 11 [Haladaptatus paucihalophilus DX253]
          Length = 207

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 117/194 (60%), Gaps = 5/194 (2%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            ++ K+ A  FY++LS VYD V NP  W E+MRD+AL   D+   +  V+DVG GTGF T
Sbjct: 3   ILEDKRRARIFYKYLSKVYDQV-NPFIWDEEMRDEALSMLDIDEDDT-VLDVGCGTGFGT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
            G+++H   +NV  LDQS HQL KA +K           GDAE LPF  D  D   S+GS
Sbjct: 61  EGLLQH--TENVHGLDQSVHQLEKAWEKLGKYDPVSFYRGDAERLPFTDDSFDIVWSSGS 118

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +R+  RV K GG+  ++GP YP   + +  AD  MLF   EE    F++A
Sbjct: 119 IEYWPEPVETLRDIRRVTKPGGEVLVVGPNYPGTSIMQKVADTIMLFYDREEADRMFREA 178

Query: 245 GFKDVQLKRIGPKW 258
           G++D++ + +GP +
Sbjct: 179 GYEDIRHREMGPTY 192


>gi|344210711|ref|YP_004795031.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           hispanica ATCC 33960]
 gi|448668304|ref|ZP_21686435.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           amylolytica JCM 13557]
 gi|343782066|gb|AEM56043.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           hispanica ATCC 33960]
 gi|445768386|gb|EMA19471.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           amylolytica JCM 13557]
          Length = 206

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DLS  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLSPDDK-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL+KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDDSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F +AG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTEAG 179

Query: 246 FKDVQ 250
           F++ +
Sbjct: 180 FEEFE 184


>gi|448641465|ref|ZP_21678075.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           sinaiiensis ATCC 33800]
 gi|448654728|ref|ZP_21681654.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           californiae ATCC 33799]
 gi|445760879|gb|EMA12135.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           sinaiiensis ATCC 33800]
 gi|445766576|gb|EMA17703.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           californiae ATCC 33799]
          Length = 206

 Score =  144 bits (362), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DLS  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLSPDDK-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL+KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDDSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F +AG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTEAG 179

Query: 246 FKDVQ 250
           +++ +
Sbjct: 180 YEEFE 184


>gi|448407156|ref|ZP_21573583.1| type 11 methyltransferase [Halosimplex carlsbadense 2-9-1]
 gi|445676369|gb|ELZ28892.1| type 11 methyltransferase [Halosimplex carlsbadense 2-9-1]
          Length = 205

 Score =  144 bits (362), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/193 (44%), Positives = 117/193 (60%), Gaps = 5/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +Q K  A  FY++LS VYD V NP  W E+MR +AL+  D+++ +  V+DVG GTGF T 
Sbjct: 3   VQDKTRARIFYKYLSKVYDQV-NPFIWNEEMRTEALDLLDIASDDR-VLDVGCGTGFATE 60

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           GI++  D  NV  LDQS HQ+ KA QK    +      GDAE LPF  D  D   S+GSI
Sbjct: 61  GILERTD--NVHGLDQSVHQMEKAWQKLGKHDPVSFYRGDAERLPFKDDTFDVVWSSGSI 118

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   + E  R+ K GG+  I+GP YP+  + +  AD +MLF  E+E    F++AG
Sbjct: 119 EYWPDPVAALAECRRIAKPGGQVLIVGPNYPSNTVFQKLADAFMLFYGEDEADRMFREAG 178

Query: 246 FKDVQLKRIGPKW 258
           ++  +   +GP +
Sbjct: 179 YEQFRHVTMGPSY 191


>gi|300709747|ref|YP_003735561.1| type 11 methyltransferase [Halalkalicoccus jeotgali B3]
 gi|448297483|ref|ZP_21487529.1| type 11 methyltransferase [Halalkalicoccus jeotgali B3]
 gi|299123430|gb|ADJ13769.1| Methyltransferase type 11 [Halalkalicoccus jeotgali B3]
 gi|445579792|gb|ELY34185.1| type 11 methyltransferase [Halalkalicoccus jeotgali B3]
          Length = 206

 Score =  143 bits (361), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 113/193 (58%), Gaps = 5/193 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD V NP  W E MR  AL   D+   +  V+DVG GTGF T 
Sbjct: 4   LEDKARARLFYKYLSKVYDRV-NPFIWNEQMRGQALSMLDIDPDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H  A++V  LDQSPHQL KA  K    +      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEH--AEDVHGLDQSPHQLEKAWAKLGKHDPVSFYLGDAERLPFADDSFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   +RE  R+   GG+  ++GP YP   L +  AD  MLF   EE    F +AG
Sbjct: 120 EYWPDPVAALREIKRITAPGGEVLVVGPNYPKSGLMQKVADSIMLFYDAEEADRMFAEAG 179

Query: 246 FKDVQLKRIGPKW 258
           F+DV+ + +GP +
Sbjct: 180 FEDVEHRLMGPSY 192


>gi|388502870|gb|AFK39501.1| unknown [Lotus japonicus]
          Length = 133

 Score =  143 bits (361), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/120 (62%), Positives = 88/120 (73%), Gaps = 7/120 (5%)

Query: 1   MASSMLNGAETFTLIRGMTPKGSSFLASDFHGKHIPKLSLIA-----KPRTVQSIKCSLS 55
           MAS ML+GAE   LI G+ P G   +   FH     K S+++     + RT+   +CS+S
Sbjct: 1   MASLMLSGAENTKLISGIAPSGLGSVGLSFHKSCFFKKSVVSYGNKYRARTLTP-RCSVS 59

Query: 56  ATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVV 115
           +  RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRD+ALEPADL +RNM VV
Sbjct: 60  SF-RPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVV 118


>gi|448634318|ref|ZP_21674716.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           vallismortis ATCC 29715]
 gi|445749291|gb|EMA00736.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           vallismortis ATCC 29715]
          Length = 206

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/185 (45%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DL+  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLAPDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++HVD   V  LDQSPHQL+KA +K     + +   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLEHVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDNSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F +AG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTEAG 179

Query: 246 FKDVQ 250
           F++ +
Sbjct: 180 FEEFE 184


>gi|399575972|ref|ZP_10769729.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogranum salarium B-1]
 gi|399238683|gb|EJN59610.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogranum salarium B-1]
          Length = 207

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+D+G GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALELLDIQQDDR-VLDIGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLQYSD--DVHGLDQSIHQMEKAWEKFGKNDQVRFYRGDAERLPFRDDSFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  I+GP YP   L +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVDALEEIRRVVKPGNKVLIVGPDYPKSGLFQKMADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|448315540|ref|ZP_21505188.1| methyltransferase type 11 [Natronococcus jeotgali DSM 18795]
 gi|445611713|gb|ELY65460.1| methyltransferase type 11 [Natronococcus jeotgali DSM 18795]
          Length = 207

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 6/194 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MR++ALE       +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSTVYDR-INPFIWNERMREEALE-LLELEPDSTVLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGS 184
           G+++HVD   V  LDQS HQL +A  K  +     +   GDAE LPF TD  D   S+GS
Sbjct: 62  GLLEHVD--EVYALDQSEHQLEQAYAKFGKRAPPVQFHRGDAERLPFATDTFDVVWSSGS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWP+P   +RE  RVLK GG+  ++GP YP   +++  AD  MLF  E E    F++A
Sbjct: 120 IEYWPNPILALREFRRVLKPGGQVLVVGPNYPDNPIAQRLADAMMLFYDEYEADRMFKRA 179

Query: 245 GFKDVQLKRIGPKW 258
           GF+DV+   +GP++
Sbjct: 180 GFEDVRHAFMGPEY 193


>gi|448679288|ref|ZP_21690125.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           argentinensis DSM 12282]
 gi|445771386|gb|EMA22443.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloarcula
           argentinensis DSM 12282]
          Length = 206

 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/185 (45%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+A+   DLS  +  V+DVG GTGF T 
Sbjct: 4   LENKARARTFYKYLSKVYDQ-INPFIWDERMRDEAIAMLDLSPDDK-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++ VD   V  LDQSPHQL+KA +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEQVD--TVYGLDQSPHQLSKAFEKFGKFGDVRYHLGDAERLPFKDDSFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GGK  I+GP YP   + +  AD  MLF  EEE    F +AG
Sbjct: 120 EYWPNPVDALAECRRLTKPGGKVLIVGPDYPNSTVFQKMADAIMLFYDEEEADRMFTEAG 179

Query: 246 FKDVQ 250
           +++ +
Sbjct: 180 YEEFE 184


>gi|448417478|ref|ZP_21579414.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halosarcina pallida JCM 14848]
 gi|445677966|gb|ELZ30462.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halosarcina pallida JCM 14848]
          Length = 223

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKSRARLFYKYLSKVYDR-INPFVWNEEMRDEALELLDIQPDDR-VLDVGSGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA  K    +  +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHALDQSIHQMEKAFAKFGRNDRVRFYRGDAERLPFKDDSFDVLWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV++ G +  ++GP YP     +Y AD  MLF  E E    F++AG
Sbjct: 120 EYWPNPVDALEEFRRVVEPGNRVLVVGPDYPETGPFQYLADAIMLFYDEHEAQRMFEEAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|433420228|ref|ZP_20405465.1| membrane protein [Haloferax sp. BAB2207]
 gi|432199225|gb|ELK55421.1| membrane protein [Haloferax sp. BAB2207]
          Length = 257

 Score =  140 bits (353), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/203 (43%), Positives = 120/203 (59%), Gaps = 10/203 (4%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKHDEVRFYRGDAERLPFAEDSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGSKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ---LKRI--GPKWYRGVR 263
           F D++   L+R    P+ YR  R
Sbjct: 180 FVDIEHHILQRQPGSPRAYRHHR 202


>gi|389845782|ref|YP_006348021.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           mediterranei ATCC 33500]
 gi|388243088|gb|AFK18034.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           mediterranei ATCC 33500]
          Length = 239

 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 5/198 (2%)

Query: 54  LSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNML 113
           LS+ S        +++K  A  FY++LS VYD V NP  W E+MRD+ALE   +   +  
Sbjct: 22  LSSVSPNPGAMGVLENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALEMLGIEQGDR- 79

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA-KQKEPLKECKIVEGDAEDLPFP 172
           V+DVG GTGF T G++++ D  NV  LDQS HQ+ KA K+     + +   GDAE LPF 
Sbjct: 80  VLDVGCGTGFGTEGLLRYTD--NVHGLDQSIHQMQKAWKKFGKNDQVRFYRGDAERLPFA 137

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
            +  D   S+GSIEYWP+P   + E  RV+K G K  ++GP YP   + +  AD  MLF 
Sbjct: 138 DNSFDIIWSSGSIEYWPNPVTALEEFRRVVKPGNKVLVVGPDYPKSGVFQKLADAIMLFY 197

Query: 233 KEEEYIEWFQKAGFKDVQ 250
            EEE    F+ AGF D++
Sbjct: 198 DEEEADRMFEAAGFVDIE 215


>gi|448543697|ref|ZP_21625251.1| membrane protein [Haloferax sp. ATCC BAA-646]
 gi|448550864|ref|ZP_21629093.1| membrane protein [Haloferax sp. ATCC BAA-645]
 gi|448558819|ref|ZP_21633232.1| membrane protein [Haloferax sp. ATCC BAA-644]
 gi|445706420|gb|ELZ58303.1| membrane protein [Haloferax sp. ATCC BAA-646]
 gi|445710809|gb|ELZ62605.1| membrane protein [Haloferax sp. ATCC BAA-645]
 gi|445712052|gb|ELZ63837.1| membrane protein [Haloferax sp. ATCC BAA-644]
          Length = 207

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K   + E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKRDEVRFYRGDAERLPFAEDSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGSKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|257052506|ref|YP_003130339.1| Methyltransferase type 11 [Halorhabdus utahensis DSM 12940]
 gi|256691269|gb|ACV11606.1| Methyltransferase type 11 [Halorhabdus utahensis DSM 12940]
          Length = 205

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/192 (44%), Positives = 112/192 (58%), Gaps = 4/192 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD V NP  W E MR +AL+     + +  V+DVG GTGF T 
Sbjct: 4   LEDKSRARLFYKYLSRVYDRV-NPFIWNERMRTEALDLL-DIDADDRVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
           GI++H D  +V  LDQSPHQL KA  K      +   GDAE LPF  D  D   S+GSIE
Sbjct: 62  GILEHTD--DVYGLDQSPHQLEKATTKLGDDPVQFCFGDAERLPFADDSFDVVWSSGSIE 119

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
           YWP+P   +RE  RV + GG+  ++GP YP   + +  AD  MLF   E+    F +AGF
Sbjct: 120 YWPNPVSALRECRRVARPGGQVLVVGPNYPRSSIFQKLADAIMLFYDAEDADRMFAEAGF 179

Query: 247 KDVQLKRIGPKW 258
            DV+   +GP +
Sbjct: 180 DDVEHVTMGPGY 191


>gi|15790980|ref|NP_280804.1| Hmp [Halobacterium sp. NRC-1]
 gi|10581563|gb|AAG20284.1| membrane protein [Halobacterium sp. NRC-1]
          Length = 218

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD V N   WTE+MR +AL   D+   +  V+DVG GTGF T 
Sbjct: 13  LEDKARARTFYKYLSKVYDRV-NTFIWTEEMRAEALSMLDIDAEDR-VLDVGCGTGFGTE 70

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSI 185
           G++KH +  +V  LDQSPHQL KA +K    +      GDAE LPF  D  D   S+GSI
Sbjct: 71  GLLKHTE--HVYGLDQSPHQLTKAWEKFGKHDPVAFHFGDAERLPFKPDSFDVVWSSGSI 128

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP P +G+RE  RV K G +  ++GP YP   + R  AD  MLF  E+E    F++AG
Sbjct: 129 EYWPHPVQGLRELRRVAKPGSQVLVVGPDYPASTVFRKLADAIMLFYDEDEADRMFREAG 188

Query: 246 FKDVQ 250
           ++++Q
Sbjct: 189 YEEIQ 193


>gi|448573354|ref|ZP_21640938.1| membrane protein [Haloferax lucentense DSM 14919]
 gi|445719119|gb|ELZ70802.1| membrane protein [Haloferax lucentense DSM 14919]
          Length = 207

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQDDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKHDEVRFYRGDAERLPFAEDSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGSKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|452206046|ref|YP_007486168.1| S-adenosylmethionine-dependent methyltransferase [Natronomonas
           moolapensis 8.8.11]
 gi|452082146|emb|CCQ35398.1| S-adenosylmethionine-dependent methyltransferase [Natronomonas
           moolapensis 8.8.11]
          Length = 220

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 107/182 (58%), Gaps = 5/182 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  INP  W E+MRD+ALE   +   +  V+DVG GTGF T 
Sbjct: 4   LEDKARARLFYKYLSRVYD-TINPFIWNEEMRDEALEWFGIEAGDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQL KA  K   ++      GDAE LPF  D  D Y S+GSI
Sbjct: 62  GLLEHTD--DVWGLDQSAHQLEKAFGKFGKRDRVNFHRGDAERLPFADDSFDAYWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   +REA RV K GG   ++GP YP        AD  MLF  E E    F +AG
Sbjct: 120 EYWPDPVAALREARRVTKPGGPVLVVGPDYPKSTAFARLADAIMLFYDEAEADRMFAEAG 179

Query: 246 FK 247
           F+
Sbjct: 180 FQ 181


>gi|448616598|ref|ZP_21665308.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           mediterranei ATCC 33500]
 gi|445751253|gb|EMA02690.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           mediterranei ATCC 33500]
          Length = 208

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE   +   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALEMLGIEQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKA-KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  NV  LDQS HQ+ KA K+     + +   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRYTD--NVHGLDQSIHQMQKAWKKFGKNDQVRFYRGDAERLPFADNSFDIIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP YP   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGNKVLVVGPDYPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|448560672|ref|ZP_21634120.1| membrane protein [Haloferax prahovense DSM 18310]
 gi|448582626|ref|ZP_21646130.1| membrane protein [Haloferax gibbonsii ATCC 33959]
 gi|445722322|gb|ELZ73985.1| membrane protein [Haloferax prahovense DSM 18310]
 gi|445732274|gb|ELZ83857.1| membrane protein [Haloferax gibbonsii ATCC 33959]
          Length = 207

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKNDEVRFYRGDAERLPFADDSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGSKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|292654489|ref|YP_003534386.1| membrane protein [Haloferax volcanii DS2]
 gi|448293508|ref|ZP_21483614.1| membrane protein [Haloferax volcanii DS2]
 gi|448597608|ref|ZP_21654533.1| membrane protein [Haloferax alexandrinus JCM 10717]
 gi|291371304|gb|ADE03531.1| membrane protein [Haloferax volcanii DS2]
 gi|445570562|gb|ELY25122.1| membrane protein [Haloferax volcanii DS2]
 gi|445739069|gb|ELZ90578.1| membrane protein [Haloferax alexandrinus JCM 10717]
          Length = 207

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKHDEVRFYRGDAERLPFAEDSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGSKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|448622496|ref|ZP_21669190.1| membrane protein [Haloferax denitrificans ATCC 35960]
 gi|445754578|gb|EMA05983.1| membrane protein [Haloferax denitrificans ATCC 35960]
          Length = 207

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWEKFGKNDEVRFYRGDAERLPFADDAFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGNKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|385804732|ref|YP_005841132.1| S-adenosylmethionine-dependent methyltransferase [Haloquadratum
           walsbyi C23]
 gi|339730224|emb|CCC41545.1| S-adenosylmethionine-dependent methyltransferase [Haloquadratum
           walsbyi C23]
          Length = 229

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 125/223 (56%), Gaps = 7/223 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K+ A  FY++LS VYD  INP  W  +MRD+AL+  D+   +  V+DVG GTGF T 
Sbjct: 4   LEDKENARLFYKYLSKVYDR-INPFIWNAEMRDEALKELDIDPTDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++  ++++  LDQS HQ+ KA  K     + K   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRY--SQDIHGLDQSIHQMEKAFSKFGRADDVKFYRGDAERLPFADNSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G +  ++GP YP  W+ +  AD  MLF  E E  E F+ AG
Sbjct: 120 EYWPNPVDALCEFRRVVKPGNRVLVVGPDYPDSWIFQQLADAIMLFYDETEAQEMFETAG 179

Query: 246 FKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQVT 288
           F D++      + Y G  +    + C+ T        S  QV+
Sbjct: 180 FVDIEHHV--QQAYPGTPQAITTIACAPTADDTVDTPSQQQVS 220


>gi|76803145|ref|YP_331240.1| S-adenosylmethionine-dependent methyltransferase 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559010|emb|CAI50608.1| S-adenosylmethionine-dependent methyltransferase [Natronomonas
           pharaonis DSM 2160]
          Length = 208

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 108/182 (59%), Gaps = 5/182 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS  YD  INP  W E+MRD+AL   D+ + +  V+DVG GTGF T 
Sbjct: 4   LEDKARARLFYKYLSKAYD-TINPFIWNEEMRDEALTWFDIDDGDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQLAKA  K   +       GDAE LPF  +  D Y S+GSI
Sbjct: 62  GLLEHTD--DVWGLDQSAHQLAKAYAKFGKRGTVNFHRGDAERLPFDDNSFDAYWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + EA RV K GG   ++GP YP   L +  AD  MLF  E+E    F  AG
Sbjct: 120 EYWPNPVDALAEARRVTKPGGTVLVVGPDYPNSTLFQKLADAIMLFYDEDEADRMFAAAG 179

Query: 246 FK 247
           F+
Sbjct: 180 FE 181


>gi|110669132|ref|YP_658943.1| menaquinone biosynthesis methyltransferase-like protein
           [Haloquadratum walsbyi DSM 16790]
 gi|109626879|emb|CAJ53348.1| S-adenosylmethionine-dependent methyltransferase [Haloquadratum
           walsbyi DSM 16790]
          Length = 229

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K+ A  FY++LS VYD  INP  W  +MRD+AL+  D+   +  V+DVG GTGF T 
Sbjct: 4   LEDKENARLFYKYLSKVYDR-INPFIWNAEMRDEALKELDIDPTDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++  ++++  LDQS HQ+ KA  K     + K   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRY--SQDIHGLDQSIHQMEKAFSKFGRTDDVKFYRGDAERLPFADNSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G +  ++GP YP  W+ +  AD  MLF  E E  E F+ AG
Sbjct: 120 EYWPNPVDALCEFRRVVKPGNRVLVVGPDYPDSWIFQQLADAIMLFYDETEAQEMFETAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|335438534|ref|ZP_08561277.1| Methyltransferase type 11 [Halorhabdus tiamatea SARL4B]
 gi|334891579|gb|EGM29826.1| Methyltransferase type 11 [Halorhabdus tiamatea SARL4B]
          Length = 205

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/192 (44%), Positives = 113/192 (58%), Gaps = 4/192 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD V NP  W E MR DAL+     + +  V+DVG GTGF T 
Sbjct: 4   LEDKSRARLFYKYLSRVYDRV-NPFIWNERMRTDALDLL-DIDADDRVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
           GI++H D   V  LDQSPHQL KA++K      +   GDAE LPF +D  D   S+GSIE
Sbjct: 62  GILEHTD--EVYGLDQSPHQLGKAREKLGDDPVQFCLGDAERLPFESDSFDVVWSSGSIE 119

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
           YWP+P   + E  RV + GG   ++GP YP   + +  AD  MLF  E++    F  AGF
Sbjct: 120 YWPNPVDALEECXRVARPGGHVLVVGPNYPRSSIFQKLADAIMLFYDEDDADRMFAAAGF 179

Query: 247 KDVQLKRIGPKW 258
           +DV+   +GP +
Sbjct: 180 EDVEHVTMGPGY 191


>gi|169236727|ref|YP_001689927.1| S-adenosylmethionine-dependent methyltransferase [Halobacterium
           salinarum R1]
 gi|167727793|emb|CAP14581.1| S-adenosylmethionine-dependent methyltransferase [Halobacterium
           salinarum R1]
          Length = 209

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD V N   WTE+MR +AL   D+   +  V+DVG GTGF T 
Sbjct: 4   LEDKARARTFYKYLSKVYDRV-NTFIWTEEMRAEALSMLDIDAEDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSI 185
           G++KH +  +V  LDQSPHQL KA +K    +      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLKHTE--HVYGLDQSPHQLTKAWEKFGKHDPVAFHFGDAERLPFKPDSFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP P +G+RE  RV K G +  ++GP YP   + R  AD  MLF  E+E    F++AG
Sbjct: 120 EYWPHPVQGLRELRRVAKPGSQVLVVGPDYPASTVFRKLADAIMLFYDEDEADRMFREAG 179

Query: 246 FKDVQ 250
           ++++Q
Sbjct: 180 YEEIQ 184


>gi|448605773|ref|ZP_21658399.1| membrane protein, partial [Haloferax sulfurifontis ATCC BAA-897]
 gi|445741799|gb|ELZ93298.1| membrane protein, partial [Haloferax sulfurifontis ATCC BAA-897]
          Length = 205

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 111/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDRV-NPFIWNEEMRDEALEMLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++ + D  +V  LDQS HQ+ KA +K     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLHYTD--DVHGLDQSIHQMQKAWEKFGKNDEVRFYRGDAERLPFADDAFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGNKVLVVGPDDPKSGVFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|448589455|ref|ZP_21649614.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           elongans ATCC BAA-1513]
 gi|445735883|gb|ELZ87431.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           elongans ATCC BAA-1513]
          Length = 207

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALELLDIQQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKA-KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA K+     + +   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWKKFGKNDQVRFYRGDAERLPFADNSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   L +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGNKVLVVGPDDPKNSLFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|313127579|ref|YP_004037849.1| methylase [Halogeometricum borinquense DSM 11551]
 gi|448285349|ref|ZP_21476593.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
 gi|312293944|gb|ADQ68404.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
 gi|445576919|gb|ELY31366.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
          Length = 220

 Score =  137 bits (344), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E+MRDDALE   +   +  V+DVG GTGF T 
Sbjct: 4   LENKSRARLFYKYLSKVYDQ-INPYIWNEEMRDDALELLGIQPDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA  K     E +   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRYSD--DVHALDQSIHQMQKAFGKFGKNDEVRFYRGDAERLPFADNSFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G +  ++GP YP   L +  AD  MLF  E E    F++AG
Sbjct: 120 EYWPNPVDALEEFRRVVKPGRRVLVVGPDYPESGLFQRVADAIMLFYDEHEAQRMFEEAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|448611052|ref|ZP_21661686.1| membrane protein [Haloferax mucosum ATCC BAA-1512]
 gi|445743484|gb|ELZ94965.1| membrane protein [Haloferax mucosum ATCC BAA-1512]
          Length = 207

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE  D+   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALEMLDIEQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKA-KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA K+     E +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWKKFGKNDEVRFYRGDAERLPFADDTFDVIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPVVALEEFRRVVKPGHKVLVVGPDDPKSGVFQKLADAIMLFYDEDEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|409721029|ref|ZP_11269251.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           hamelinensis 100A6]
 gi|448722704|ref|ZP_21705235.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           hamelinensis 100A6]
 gi|445788841|gb|EMA39542.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           hamelinensis 100A6]
          Length = 206

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 108/182 (59%), Gaps = 5/182 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD  INP  W E MRD+AL+  D+S  +  V+DVG GTGF T 
Sbjct: 4   LENKARARVFYKYLSRVYDE-INPFVWNEAMRDEALDWFDVSQDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQSPHQL +A  K     + K   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHTD--DVHGLDQSPHQLERAFAKFGKNDQVKFYRGDAERLPFDDDAFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   +RE  RV K GG   ++GP  P   +    AD  MLF  E+E    F  AG
Sbjct: 120 EYWPDPVETLREFRRVAKPGGPVLVVGPDAPHTSVFGALADSIMLFYDEDEADRMFDAAG 179

Query: 246 FK 247
           ++
Sbjct: 180 YE 181


>gi|354610062|ref|ZP_09028018.1| Methyltransferase type 11 [Halobacterium sp. DL1]
 gi|353194882|gb|EHB60384.1| Methyltransferase type 11 [Halobacterium sp. DL1]
          Length = 212

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 114/192 (59%), Gaps = 5/192 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E MRD+AL   D+   +  V+DVG GTGF T 
Sbjct: 4   LENKSRARTFYKYLSKVYDRV-NPFVWNEAMRDEALSMVDIGADDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSI 185
           G+++H +  +V  LDQS HQL +A +K    +      GDAE LPF     D   S+GSI
Sbjct: 62  GLLEHTE--HVYGLDQSRHQLQQAWKKLGKHDPVAFHFGDAERLPFKDGSFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV+K GG+  ++GP YP   + +  AD  MLF  E E    F +AG
Sbjct: 120 EYWPNPVAGLRELRRVVKPGGQVLVVGPDYPNSAVLQRVADAIMLFYDEAEANRMFAEAG 179

Query: 246 FKDVQLKRIGPK 257
           F DV+ + +  K
Sbjct: 180 FVDVEHRVLQAK 191


>gi|448579141|ref|ZP_21644418.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           larsenii JCM 13917]
 gi|445723820|gb|ELZ75456.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haloferax
           larsenii JCM 13917]
          Length = 207

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+ALE   +   +  V+DVG GTGF T 
Sbjct: 4   LENKARARLFYKYLSKVYDQV-NPFIWNEEMRDEALELLGIQEGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKA-KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G++++ D  +V  LDQS HQ+ KA K+     + +   GDAE LPF  +  D   S+GSI
Sbjct: 62  GLLRYTD--DVHGLDQSIHQMQKAWKKFGKNDQVRFYRGDAERLPFADNSFDIIWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  RV+K G K  ++GP  P   L +  AD  MLF  EEE    F+ AG
Sbjct: 120 EYWPNPVTALEEFRRVVKPGNKVLVVGPDDPKNSLFQKLADAIMLFYDEEEADRMFEAAG 179

Query: 246 FKDVQ 250
           F D++
Sbjct: 180 FVDIE 184


>gi|222478827|ref|YP_002565064.1| methyltransferase type 11 [Halorubrum lacusprofundi ATCC 49239]
 gi|222451729|gb|ACM55994.1| Methyltransferase type 11 [Halorubrum lacusprofundi ATCC 49239]
          Length = 207

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 7/199 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V N   WTE+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LENKSNARLFYKYLSKVYDQV-NRFTWTEEMRTEALSWLEFGD-DPKVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           GI++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GILEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDTFDIVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPIEGLRELRRVAKPGGQVLVVGPDYPHNPVLQRVADAIMLFYDEDEADRMFEAAG 179

Query: 246 FK--DVQLKRIGPKWYRGV 262
           ++  +  ++R  P+  R +
Sbjct: 180 YEAYEHHIQRASPQSPRAI 198


>gi|448732957|ref|ZP_21715216.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           salifodinae DSM 8989]
 gi|445803728|gb|EMA54007.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           salifodinae DSM 8989]
          Length = 212

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 110/187 (58%), Gaps = 9/187 (4%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD VINP  W E+MR DAL   D+   +  V+DVG GTGF+  
Sbjct: 4   LEDKSRARLFYKYLSRVYD-VINPFFWEEEMRSDALSMVDIEQDDR-VLDVGCGTGFSIE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDLPFPTDYADRYVSAG 183
           G+V++ D  ++  +DQS HQL K+  K    E   VE   GDAE LPF  D  D   S+G
Sbjct: 62  GLVQYSD--DIHGIDQSRHQLEKSIGK--FGENGSVELHRGDAERLPFRDDTFDIVWSSG 117

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243
           SIEYWP+P   + E  RV K G +  ++GP  P   + R  +D  MLF  E+E    F +
Sbjct: 118 SIEYWPNPVEALHEFRRVTKPGNRVLVVGPDEPQNAILRRISDRIMLFYGEKEADRMFSE 177

Query: 244 AGFKDVQ 250
           AGF+D++
Sbjct: 178 AGFRDIE 184


>gi|257387329|ref|YP_003177102.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
 gi|257169636|gb|ACV47395.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
          Length = 206

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V NP  W E+MRD+A+   D+   +  V+DVG GTGF T 
Sbjct: 4   LENKSRARTFYKYLSKVYDRV-NPFIWNEEMRDEAIAKLDIEPDDH-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++    ++V  LDQS HQL KA  K   +       GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEAT--EHVYGLDQSAHQLEKAYAKFGKRGPVAFHRGDAERLPFQDDTFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + E  R+ K GG+  I+GP YP+  + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPVDALEECRRITKPGGRVLIVGPDYPSQSVFQKLADAIMLFYDEDEADRMFEDAG 179

Query: 246 FKDVQ 250
           F D +
Sbjct: 180 FTDFE 184


>gi|448731518|ref|ZP_21713817.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           saccharolyticus DSM 5350]
 gi|445791846|gb|EMA42465.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           saccharolyticus DSM 5350]
          Length = 206

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 108/185 (58%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  INP  W E MR DA++  D +  +  V+DVG GTGF T 
Sbjct: 4   LEDKARARVFYKYLSRVYDE-INPFIWNESMRADAIDWLDPAPDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++  D  NV  LDQS HQL +A +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLERTD--NVHGLDQSSHQLERAWEKFGKTDQVRFYRGDAERLPFADDAFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   +RE  RV+K GG   ++GP  PT  +    AD  MLF  E+E    F  AG
Sbjct: 120 EYWPDPVATLREFCRVVKPGGSVLVVGPDAPTSSVFGRVADAIMLFYDEDEADRMFDAAG 179

Query: 246 FKDVQ 250
           F++ +
Sbjct: 180 FEEFE 184


>gi|345006165|ref|YP_004809018.1| type 11 methyltransferase [halophilic archaeon DL31]
 gi|344321791|gb|AEN06645.1| Methyltransferase type 11 [halophilic archaeon DL31]
          Length = 207

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  INP  W E+MRD+AL+   +   +  V+DVG GTGF T 
Sbjct: 4   LEDKGRARLFYKYLSKVYDR-INPFVWNEEMRDEALDRTGIEQGDR-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H +  +V  LDQS HQL KA  K           GDAE LPF  D  D Y S+GSI
Sbjct: 62  GLLQHTN--DVHGLDQSVHQLEKAWAKFGKTDRVNFYRGDAERLPFADDSFDHYWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P   + EA RV + GG   ++GP  PT  L    AD  MLF   +E    F +AG
Sbjct: 120 EYWPNPVDALEEARRVTEPGGTVLMVGPDAPTNTLFGKLADAIMLFYDADEADRMFTEAG 179

Query: 246 FKDVQ 250
           + + +
Sbjct: 180 YTEFE 184


>gi|448472078|ref|ZP_21601033.1| methyltransferase type 11 [Halorubrum aidingense JCM 13560]
 gi|445820271|gb|EMA70098.1| methyltransferase type 11 [Halorubrum aidingense JCM 13560]
          Length = 207

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 7/199 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           +++K  A  FY++LS VYD V N  +W ++MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LENKSNARLFYKYLSKVYDQV-NRFNWNDEMRSEALSWLEFGD-DPKVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K   ++      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKRDRVNFYRGDAERLPFRDDTFDIVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+ E  RV K GG+  ++GP YP   + +  AD  MLF  E E    F  AG
Sbjct: 120 EYWPNPVEGLSEIRRVAKPGGQVLVVGPDYPHNRVLQRIADAIMLFYDEAEADRMFSAAG 179

Query: 246 FKDVQ--LKRIGPKWYRGV 262
           F++ +  ++R  P+  R +
Sbjct: 180 FEEFEHHIQRATPQSPRAI 198


>gi|448424747|ref|ZP_21582603.1| methyltransferase type 11 [Halorubrum terrestre JCM 10247]
 gi|445681957|gb|ELZ34382.1| methyltransferase type 11 [Halorubrum terrestre JCM 10247]
          Length = 229

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 125/221 (56%), Gaps = 8/221 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDR-INSFNWNEEMRAEALSWLEFGD-DPRVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPILQRVADAIMLFYDADEADRMFEAAG 179

Query: 246 FKDVQ--LKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSP 284
           +++ +  +++  P+  R +     + G S  GV  ++  +P
Sbjct: 180 YEEFEHHIQQATPQSPRAITTVARVPG-SDEGVDESASSAP 219


>gi|448450543|ref|ZP_21592362.1| methyltransferase type 11 [Halorubrum litoreum JCM 13561]
 gi|448509965|ref|ZP_21615846.1| methyltransferase type 11 [Halorubrum distributum JCM 9100]
 gi|448522057|ref|ZP_21618322.1| methyltransferase type 11 [Halorubrum distributum JCM 10118]
 gi|445696306|gb|ELZ48397.1| methyltransferase type 11 [Halorubrum distributum JCM 9100]
 gi|445702331|gb|ELZ54285.1| methyltransferase type 11 [Halorubrum distributum JCM 10118]
 gi|445811657|gb|EMA61660.1| methyltransferase type 11 [Halorubrum litoreum JCM 13561]
          Length = 229

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 116/199 (58%), Gaps = 7/199 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDR-INRFNWNEEMRAEALSWLEFGD-DPTVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPILQRVADAIMLFYDADEADRMFEAAG 179

Query: 246 FKDVQ--LKRIGPKWYRGV 262
           +++ +  ++R  P+  R +
Sbjct: 180 YEEFEHHIQRATPQSPRAI 198


>gi|448481837|ref|ZP_21605152.1| methyltransferase type 11 [Halorubrum arcis JCM 13916]
 gi|445821536|gb|EMA71325.1| methyltransferase type 11 [Halorubrum arcis JCM 13916]
          Length = 229

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDR-INRFNWNEEMRAEALSWLEFGD-DPTVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPILQRVADAIMLFYDADEADRMFEAAG 179

Query: 246 FKDVQ--LKRIGPKWYRGV 262
           ++  +  ++R  P+  R +
Sbjct: 180 YEKFEHHIQRATPQSPRAI 198


>gi|448732111|ref|ZP_21714393.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           salifodinae DSM 8989]
 gi|445805023|gb|EMA55250.1| ubiquinone/menaquinone biosynthesis methyltransferase [Halococcus
           salifodinae DSM 8989]
          Length = 206

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 107/185 (57%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  INP  W E MR +A++  D +  +  V+DVG GTGF T 
Sbjct: 4   LEDKARARVFYKYLSRVYDE-INPFIWNETMRAEAIDWLDPAPDDR-VLDVGCGTGFATE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++  D  NV  LDQS HQL +A +K     + +   GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLERTD--NVHGLDQSSHQLERAWEKFGKTDQVRFYRGDAERLPFADDTFDAVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWPDP   + E  RV++ GG   ++GP  PT  +    AD  MLF  E+E    F  AG
Sbjct: 120 EYWPDPVAALAEFRRVVEPGGGVLVVGPDAPTSSMFGRLADAIMLFYDEDEADRMFDAAG 179

Query: 246 FKDVQ 250
           F+D +
Sbjct: 180 FEDFE 184


>gi|448498606|ref|ZP_21610892.1| methyltransferase type 11 [Halorubrum coriense DSM 10284]
 gi|445698355|gb|ELZ50400.1| methyltransferase type 11 [Halorubrum coriense DSM 10284]
          Length = 229

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 7/211 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W ++MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDQ-INSFNWNDEMRAEALSWLEFGD-DPTVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPILQRVADAIMLFYDADEADRMFESAG 179

Query: 246 FKDVQ--LKRIGPKWYRGVRRHGLIMGCSVT 274
           +++ +  +++  P+  R +     + G   T
Sbjct: 180 YEEFEHHIQQATPQSPRAITTVARVPGGEET 210


>gi|448531300|ref|ZP_21620987.1| methyltransferase type 11 [Halorubrum hochstenium ATCC 700873]
 gi|445707257|gb|ELZ59115.1| methyltransferase type 11 [Halorubrum hochstenium ATCC 700873]
          Length = 227

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDQ-INSFNWNEEMRAEALSWLEFGD-DPKVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K    +      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSIHQMEKAFEKFGRHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E  + F +AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPVLQRVADAIMLFYDADEADQMFAEAG 179

Query: 246 FKDVQ 250
           +++ +
Sbjct: 180 YEEFE 184


>gi|448445142|ref|ZP_21590197.1| methyltransferase type 11 [Halorubrum saccharovorum DSM 1137]
 gi|445685448|gb|ELZ37802.1| methyltransferase type 11 [Halorubrum saccharovorum DSM 1137]
          Length = 207

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +    +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARVFYKYLSKVYDK-INWFNWNEEMRSEALSWLEFGE-DPKVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKHDRVNFYRGDAERLPFRDDTFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPIEGLRELRRVAKPGGQVLVVGPDYPHNRILQRVADAIMLFYDEDEADRMFEAAG 179

Query: 246 FK--DVQLKRIGPKWYRGV 262
           ++  +  ++R  P+  R +
Sbjct: 180 YEAYEHHIQRSTPRSPRAI 198


>gi|448467539|ref|ZP_21599551.1| methyltransferase type 11 [Halorubrum kocurii JCM 14978]
 gi|445812415|gb|EMA62409.1| methyltransferase type 11 [Halorubrum kocurii JCM 14978]
          Length = 207

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 5/182 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARVFYKYLSKVYDK-INWFNWNEEMRAEALSWLEFGD-DPKVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K   ++      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSVHQMEKAFEKFGKRDRVNFYRGDAERLPFRDDTFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPIEGLRELRRVAKPGGQVLVVGPDYPHNRVFQRVADAIMLFYDEDEADRMFEAAG 179

Query: 246 FK 247
           ++
Sbjct: 180 YE 181


>gi|448434842|ref|ZP_21586540.1| methyltransferase type 11 [Halorubrum tebenquichense DSM 14210]
 gi|445684465|gb|ELZ36841.1| methyltransferase type 11 [Halorubrum tebenquichense DSM 14210]
          Length = 233

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 5/185 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDR-INSFNWNEEMRAEALSWLEFGD-DPRVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K    +      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSIHQMEKAFEKFGRHDRVNFYRGDAERLPFRDDAFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF   +E    F +AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNPVLQRVADAIMLFYDADEADRMFAEAG 179

Query: 246 FKDVQ 250
           +++ +
Sbjct: 180 YEEFE 184


>gi|448456879|ref|ZP_21595535.1| methyltransferase type 11 [Halorubrum lipolyticum DSM 21995]
 gi|445811476|gb|EMA61483.1| methyltransferase type 11 [Halorubrum lipolyticum DSM 21995]
          Length = 207

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 5/182 (2%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  +    V+DVG GTGF T 
Sbjct: 4   LEDKSNARVFYKYLSKVYDK-INWFNWNEEMRAEALSWLEFGDEPT-VLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  ++  LDQS HQ+ KA +K    +      GDAE LPF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DIHGLDQSVHQMEKAFEKFGKHDLVNFYRGDAERLPFRDDTFDIVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K GG+  ++GP YP   + +  AD  MLF  E+E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGGQVLVVGPDYPHNRVLQRVADAIMLFYDEDEADRMFEAAG 179

Query: 246 FK 247
           ++
Sbjct: 180 YE 181


>gi|448492236|ref|ZP_21608830.1| methyltransferase type 11 [Halorubrum californiensis DSM 19288]
 gi|445691695|gb|ELZ43879.1| methyltransferase type 11 [Halorubrum californiensis DSM 19288]
          Length = 229

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 7/211 (3%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           ++ K  A  FY++LS VYD  IN  +W E+MR +AL   +  + +  V+DVG GTGF T 
Sbjct: 4   LEDKSNARLFYKYLSKVYDQ-INSFNWNEEMRAEALSWLEFGD-DPTVLDVGCGTGFGTE 61

Query: 127 GIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           G+++H D  +V  LDQS HQ+ KA +K           GDAE +PF  D  D   S+GSI
Sbjct: 62  GLLEHAD--DVHGLDQSIHQMEKAFEKFGKHDRVNFYRGDAERIPFRDDTFDVVWSSGSI 119

Query: 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245
           EYWP+P  G+RE  RV K G +  ++GP YP   + +  AD  MLF   +E    F+ AG
Sbjct: 120 EYWPNPVEGLRELRRVAKPGAQVLVVGPDYPHNPILQRVADAIMLFYDADEADRMFEAAG 179

Query: 246 FKDVQ--LKRIGPKWYRGVRRHGLIMGCSVT 274
           +++ +  +++  P+  R +     + G   T
Sbjct: 180 YEEFEHHIQQATPQSPRAITTVARVPGGEET 210


>gi|448737633|ref|ZP_21719671.1| methyltransferase type 11 [Halococcus thailandensis JCM 13552]
 gi|445803590|gb|EMA53880.1| methyltransferase type 11 [Halococcus thailandensis JCM 13552]
          Length = 206

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 104/190 (54%), Gaps = 6/190 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD  INP  W  +MR +AL+  D+   +  V+DVG GTGF T
Sbjct: 3   ILENKARAQVFYKYLSNVYDE-INPFVWNAEMRAEALDLFDVDEDDR-VLDVGCGTGFGT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGS 184
            G+++H   + V  LDQS HQL +A  K       K   GDAE LPF  D  D   S+GS
Sbjct: 61  EGLLEHT--ERVHGLDQSAHQLKRAYGKFGRDGPVKFYRGDAERLPFEDDTFDALWSSGS 118

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWPDP   +RE  RV + GG   ++GP  P   +    AD  MLF  EEE    F  A
Sbjct: 119 IEYWPDPVAALRECRRVTEPGGNVLVVGPDAPKTSVIGRLADAIMLFYDEEEADRMFAAA 178

Query: 245 GFKDVQLKRI 254
              DV   RI
Sbjct: 179 DL-DVVEHRI 187


>gi|448725460|ref|ZP_21707915.1| S-adenosylmethionine-dependent methyltransferase 1 [Halococcus
           morrhuae DSM 1307]
 gi|445798307|gb|EMA48722.1| S-adenosylmethionine-dependent methyltransferase 1 [Halococcus
           morrhuae DSM 1307]
          Length = 206

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 104/190 (54%), Gaps = 6/190 (3%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
            +++K  A  FY++LS VYD  INP  W  +MR +ALE  D+   +  V+D+G GTGF T
Sbjct: 3   ILENKARAQVFYKYLSNVYDE-INPFVWNAEMRAEALELFDVDEDDR-VLDIGCGTGFGT 60

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGS 184
            G+++H   + V  LDQS HQL +A  K       K   GDAE LPF  +  D   S+GS
Sbjct: 61  EGLLEHT--ERVHGLDQSAHQLKRAYGKFGRDGPVKFYRGDAERLPFEDNTFDALWSSGS 118

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244
           IEYWPDP   +RE  RV + GG   ++GP  P   +    AD  MLF  E+E    F  A
Sbjct: 119 IEYWPDPVAALRECRRVTEPGGNVLVVGPDAPKTSVVGRLADAIMLFYDEDEADRMFAAA 178

Query: 245 GFKDVQLKRI 254
              DV   RI
Sbjct: 179 DL-DVVEHRI 187


>gi|182624810|ref|ZP_02952590.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens D str.
           JGS1721]
 gi|177910020|gb|EDT72422.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens D str.
           JGS1721]
          Length = 207

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 11/173 (6%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL 147
           I   ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K   A  V  LD S + L
Sbjct: 17  IRVDYFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKK--ANIVFSLDSSKNML 72

Query: 148 ----AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK 203
               + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK
Sbjct: 73  KELYSSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLK 131

Query: 204 LGGKACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             GK  I   + +   W+     D+W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 132 PNGKVVITDVLEHKGEWVREEMFDIWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|110799969|ref|YP_694632.1| UbiE/COQ5 family methlytransferase [Clostridium perfringens ATCC
           13124]
 gi|110674616|gb|ABG83603.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens ATCC
           13124]
          Length = 207

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K  +   V  LD S + L    
Sbjct: 21  YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKKANI--VFSLDSSKNMLKELY 76

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 77  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKSNGK 135

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 136 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|448307037|ref|ZP_21496938.1| type 11 methyltransferase [Natronorubrum bangense JCM 10635]
 gi|445596584|gb|ELY50669.1| type 11 methyltransferase [Natronorubrum bangense JCM 10635]
          Length = 214

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 94/198 (47%), Gaps = 11/198 (5%)

Query: 68  QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLG 127
            H     WF   L+  YD V+    W E ++  AL+  DL + +  V+DVG GTG T   
Sbjct: 6   NHDATRHWF-DLLAPGYDAVVPSLFWPESLQQAALDRIDLESVDR-VLDVGCGTGETIDQ 63

Query: 128 IVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187
           +   V A +   LD S  QL  A  K  L++ + + GDA  LP+  +  D  VS GSI Y
Sbjct: 64  LRSDVSATHG--LDLSQPQLETAADKSELEDVRFIRGDARTLPYADETFDCVVSVGSILY 121

Query: 188 WPDPQRGIREAYRVLKLGGKACIIG--PVYPTFW-----LSRYFADVWMLFPKEEEYIEW 240
           W  P   +REA+RV K GG+  ++G      ++W     +    A+        EE  E 
Sbjct: 122 WSAPVEALREAHRVTKQGGEILVLGFNRRSLSWWNPVQNVQDGVAETLFFRYNREEGTEL 181

Query: 241 FQKAGFKDVQLKRIGPKW 258
           F +AG+ D   +  GP W
Sbjct: 182 FLEAGWTDPTHEVTGPIW 199


>gi|110802464|ref|YP_697501.1| UbiE/COQ5 family methlytransferase [Clostridium perfringens SM101]
 gi|110682965|gb|ABG86335.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens SM101]
          Length = 207

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K  +   V  LD S + L    
Sbjct: 21  YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKKANL--VFSLDSSKNMLKELY 76

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 77  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKPNGK 135

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 136 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|18309157|ref|NP_561091.1| UbiE/COQ5 family methyltransferase [Clostridium perfringens str.
           13]
 gi|18143832|dbj|BAB79881.1| hypothetical protein [Clostridium perfringens str. 13]
          Length = 191

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K   A  V  LD S + L    
Sbjct: 5   YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKK--ANIVFSLDSSKNMLKELY 60

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 61  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKPNGK 119

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 120 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 167


>gi|168213308|ref|ZP_02638933.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens CPE
           str. F4969]
 gi|170715160|gb|EDT27342.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens CPE
           str. F4969]
          Length = 207

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K  +   V  LD S + L    
Sbjct: 21  YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKKANL--VFSLDSSKNMLKELY 76

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 77  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKPNGK 135

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 136 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|168210215|ref|ZP_02635840.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens B str.
           ATCC 3626]
 gi|168217277|ref|ZP_02642902.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens NCTC
           8239]
 gi|169344291|ref|ZP_02865271.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens C str.
           JGS1495]
 gi|422347764|ref|ZP_16428674.1| hypothetical protein HMPREF9476_02747 [Clostridium perfringens
           WAL-14572]
 gi|422872763|ref|ZP_16919248.1| UbiE/COQ5 family methyltransferase [Clostridium perfringens F262]
 gi|169297549|gb|EDS79651.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens C str.
           JGS1495]
 gi|170711708|gb|EDT23890.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens B str.
           ATCC 3626]
 gi|182380669|gb|EDT78148.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens NCTC
           8239]
 gi|373223462|gb|EHP45811.1| hypothetical protein HMPREF9476_02747 [Clostridium perfringens
           WAL-14572]
 gi|380306343|gb|EIA18613.1| UbiE/COQ5 family methyltransferase [Clostridium perfringens F262]
          Length = 207

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI K  +   V  LD S + L    
Sbjct: 21  YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIAKKANI--VFSLDSSKNMLKELY 76

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 77  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKPNGK 135

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 136 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|168205663|ref|ZP_02631668.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens E str.
           JGS1987]
 gi|170662844|gb|EDT15527.1| methyltransferase, UbiE/COQ5 family [Clostridium perfringens E str.
           JGS1987]
          Length = 207

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---- 147
           ++ +++R+ A++  D+SN+  ++ D+G GTGF +LGI +  +   V  LD S + L    
Sbjct: 21  YFKDELREMAIKSVDISNK--VIADLGAGTGFISLGIARKANI--VFSLDSSKNMLKELY 76

Query: 148 AKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           + AK+ E +     ++G+ E+LP   D  D      ++ +  +P + I+E  RVLK  GK
Sbjct: 77  SSAKENE-INNIYPIKGELENLPLFDDSIDLIFMNMALHHVANPDKAIKEMNRVLKPNGK 135

Query: 208 ACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             I   + +   W      D W+ F   ++ I WF+KAGFK++ +K  G
Sbjct: 136 VVITDVLEHKGEWAREEMFDTWLGF-NYDQLINWFEKAGFKNISIKNTG 183


>gi|448303836|ref|ZP_21493782.1| type 11 methyltransferase [Natronorubrum sulfidifaciens JCM 14089]
 gi|445592463|gb|ELY46650.1| type 11 methyltransferase [Natronorubrum sulfidifaciens JCM 14089]
          Length = 214

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 90/197 (45%), Gaps = 11/197 (5%)

Query: 69  HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGI 128
           H     WF   L+  YD V+    W E ++  AL+  DL   +  V+D+G GTG T   +
Sbjct: 7   HDATRRWF-DLLAPGYDAVVPSLFWPESLQQAALDRIDLEPTDR-VLDIGCGTGETIDQL 64

Query: 129 VKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188
              V A  V  LD S  QL  A  K  L++   + GDA  LP+  +  D  VS GSI YW
Sbjct: 65  RSDVSA--VHGLDLSQPQLETAADKAELEDACFIRGDARTLPYADETFDCVVSVGSILYW 122

Query: 189 PDPQRGIREAYRVLKLGGKACIIGPV-------YPTFWLSRYFADVWMLFPKEEEYIEWF 241
             P   +REA+RV K GG+  ++G          P   +    A+        EE  E F
Sbjct: 123 SAPAETLREAHRVTKQGGEILVLGFNRRSLSWWNPVQNVQDGVAETLFFRYDREEGTELF 182

Query: 242 QKAGFKDVQLKRIGPKW 258
            KAG+ D   +  GP W
Sbjct: 183 LKAGWTDPTHEVTGPVW 199


>gi|410727599|ref|ZP_11365814.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Clostridium sp. Maddingley MBC34-26]
 gi|410598506|gb|EKQ53077.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Clostridium sp. Maddingley MBC34-26]
          Length = 210

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 10/169 (5%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLAKA 150
           +++D+R  A + A++  +  +  D+G GTG+ + G+++    KN+ +L  DQS   L   
Sbjct: 23  FSDDVRLAAYKAANIE-KGKIAADMGAGTGYISEGLIQ----KNIKVLAVDQSEEMLNLL 77

Query: 151 KQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC 209
           K+K    KE K ++G  E++P   DY D   +   + +  +P   I+E YR+LK GGK  
Sbjct: 78  KEKFSYYKELKCIQGVGENIPIEDDYVDYVFANMFLHHVENPSLVIKEMYRILKSGGKLV 137

Query: 210 IIGPVYPTF-WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
           I       F +L     DVWM F + ++ IEWF+ AG ++V +  +G  
Sbjct: 138 ITDLDQHNFEFLKTEQYDVWMGFDR-KKIIEWFKDAGLQNVTINCVGSN 185


>gi|359411647|ref|ZP_09204112.1| Methyltransferase type 11 [Clostridium sp. DL-VIII]
 gi|357170531|gb|EHI98705.1| Methyltransferase type 11 [Clostridium sp. DL-VIII]
          Length = 209

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 11/191 (5%)

Query: 71  KEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVK 130
           KE+  ++  +S  +D++ N   +++++R  A + AD+  R  +  D+G GTGF T G++ 
Sbjct: 2   KESKEYFDEVSSNWDNMRND-FFSDEVRLVAYKTADVQERK-VAADIGAGTGFITEGLIN 59

Query: 131 HVDAKNVTIL--DQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187
               KNV ++  DQS   L   K K    K+ K ++G  E LP   +  D   +   + +
Sbjct: 60  ----KNVKVIAVDQSEEMLNLLKNKFSNYKDLKCIQGVGEKLPIEDNSVDYVFANMFLHH 115

Query: 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWMLFPKEEEYIEWFQKAGF 246
             +P   I+E  R+LK GGK  I       F +L     DVWM F +    IEWF+ AG 
Sbjct: 116 VENPSLVIKEMQRILKSGGKLVITDLDKHNFEFLKTEQYDVWMGFDR-NNIIEWFEDAGL 174

Query: 247 KDVQLKRIGPK 257
           K+V +  +G  
Sbjct: 175 KNVTVNCVGSN 185


>gi|320161487|ref|YP_004174711.1| hypothetical protein ANT_20850 [Anaerolinea thermophila UNI-1]
 gi|319995340|dbj|BAJ64111.1| hypothetical protein ANT_20850 [Anaerolinea thermophila UNI-1]
          Length = 470

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 5/140 (3%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLP 170
           M+V D+GGGTGF TLG+   V+   V +++ S   L  AK+           +   E+LP
Sbjct: 44  MVVADIGGGTGFVTLGLATRVN--QVHLVEPSSAMLEIAKKNLSAFTNIIYHQTGVENLP 101

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           FP +  D   +   + + PDP++GI+E  RVL+ GG+  +      ++ W     ADVW+
Sbjct: 102 FPEESLDAMFANMVLHHLPDPEQGIKEMVRVLRPGGRLILTDLDNHSYTWFKEEMADVWL 161

Query: 230 LFPKEEEYIEWFQKAGFKDV 249
            F + +E  +WF++ G  +V
Sbjct: 162 GFDR-QEIRKWFEQTGLVNV 180



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 23/182 (12%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQ---KEPLKECKIVEGDAE 167
           M V+D+G G G       + V  +   I +D SP  L KA+Q   K  L   +  +G+AE
Sbjct: 297 MTVLDIGSGRGLDVFLAAQKVGKEGRIIGIDPSPEMLKKAQQIAEKYQLANVEFRQGEAE 356

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF--------- 218
           ++P P +  D  +S   +    D  +  +EA+RVLK GG+  I   V  T          
Sbjct: 357 EIPLPDETVDVILSNCVVNLSEDKSKAFQEAFRVLKSGGRLNISDIVLSTSLPMEIQLDE 416

Query: 219 --WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 276
             W+S     +      E+EY++  Q+AGF ++ +++  P    G      I   ++T  
Sbjct: 417 TGWVSCISGSL-----PEQEYLDLLQQAGFSEIAIEKKVPA---GQIAGTEIFSLTLTAT 468

Query: 277 KP 278
           KP
Sbjct: 469 KP 470


>gi|162453899|ref|YP_001616266.1| SAM-dependent methyltransferase [Sorangium cellulosum So ce56]
 gi|161164481|emb|CAN95786.1| SAM-dependent methyltransferase [Sorangium cellulosum So ce56]
          Length = 215

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 6/166 (3%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL 147
           I  G++TE MRD A+  A L   + +V D+G GTGF   G+   V  + V   D S   L
Sbjct: 26  IRSGYFTEGMRDAAIAQAGLPP-DAVVADIGTGTGFVAAGLAPKV--RKVYGFDSSAEML 82

Query: 148 AKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           + AK+         +   + E +P P    D   +   + + PDP   IRE  R+LK GG
Sbjct: 83  SVAKKNLARFDNVALQVAEGESIPLPDQSLDAVFANMYLHHAPDPAATIREMTRLLKPGG 142

Query: 207 KACIIG-PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
             CI     +   W     ADVW+ F +  +  +W+  AG + V++
Sbjct: 143 VLCITDLDTHTNTWFREKMADVWLGFDR-TDVKKWYADAGLQKVEV 187


>gi|319935290|ref|ZP_08009728.1| hypothetical protein HMPREF9488_00559 [Coprobacillus sp. 29_1]
 gi|319809698|gb|EFW06099.1| hypothetical protein HMPREF9488_00559 [Coprobacillus sp. 29_1]
          Length = 209

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DVG G G  T  +        +T +D S  QL  +     +K      G  E LP  +
Sbjct: 54  ILDVGCGNGAFTQAVSAKFPLSTITAIDTSISQLVSSANITFMK------GSVEQLPLVS 107

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML--- 230
           +  D  ++  S+ +W +  +GI E YRVLK GG+  I  P+    W+S Y   V M    
Sbjct: 108 ESFDLVIAVLSLHHWKEKNKGINEIYRVLKKGGRLIIGDPLLED-WMSHYILGVLMQVLD 166

Query: 231 ---FPKEEEYIEWFQKAGFKDVQLKRI 254
              F  ++   E+   AGF+D+ ++ I
Sbjct: 167 GGSFTDKKRVSEYLNMAGFEDISIRLI 193


>gi|433655216|ref|YP_007298924.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Thermoanaerobacterium thermosaccharolyticum M0795]
 gi|433293405|gb|AGB19227.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Thermoanaerobacterium thermosaccharolyticum M0795]
          Length = 211

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 10/174 (5%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVV-DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ 146
           I   ++ +D+R+ A+E +++ NR  L+V D+G G+GF  L + K+  A+ V  +D S   
Sbjct: 17  IRKKYFDDDIRNIAIERSNIKNRGGLIVADIGTGSGFMALELSKY--AREVVGIDVSDEM 74

Query: 147 LAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK 203
           L  AKQ      +     ++G  E +P   D  D   S   + +  +P +GI E +R+LK
Sbjct: 75  LKYAKQTAENAGINNIIFLKGSMEQIPIIDDSIDVVFSNMVLHHVENPFKGIMEIHRILK 134

Query: 204 LGGKACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIE-WFQKAGFKDVQLKRIG 255
            GG   I   + + + W      D W+ F  E+  IE W   + FK++ +K  G
Sbjct: 135 PGGMLIITDVMKHSSEWARFEMYDRWLGFNLED--IEKWLIHSNFKEILVKETG 186


>gi|304316215|ref|YP_003851360.1| type 11 methyltransferase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777717|gb|ADL68276.1| Methyltransferase type 11 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 211

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 10/174 (5%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVV-DVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ 146
           I   ++ +D+R+ A+E +++ N+  L+V D+G G+GF  L + K+  A+ V  +D S   
Sbjct: 17  IRKKYFDDDIRNIAIERSNIKNKGGLIVADIGTGSGFMALELSKY--AREVVGIDVSDEM 74

Query: 147 LAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK 203
           L  AKQ      +     ++G  E +P   D  D   S   + +  +P +GI E +R+LK
Sbjct: 75  LKYAKQTAENAGINNIIFLKGSMEQIPIIDDSIDVVFSNMVLHHVENPFKGIMEIHRILK 134

Query: 204 LGGKACIIGPV-YPTFWLSRYFADVWMLFPKEEEYIE-WFQKAGFKDVQLKRIG 255
            GG   I   + + + W      D W+ F  E+  IE W   + FK++ +K  G
Sbjct: 135 PGGMLIITDVMKHSSEWARFEMYDRWLGFNLED--IEKWLIHSNFKEILVKETG 186


>gi|167574603|ref|ZP_02367477.1| SAM-dependent methyltransferase [Burkholderia oklahomensis C6786]
          Length = 212

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 15/172 (8%)

Query: 93  WTEDMRDDALEPADLSNRNML--VVDVGGGTGFTTLGIVKHVDAKNVTILDQSP-HQLAK 149
           +++++R  A   A++S  ++L    DVG GTGF T G+VK      + ++   P  ++  
Sbjct: 22  FSDEVRRAAFRAAEISTDSILKTAADVGAGTGFMTEGLVK----AGLEVIAVDPVQEMLD 77

Query: 150 AKQKEPLK----ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLG 205
              ++P      EC++  G+AE LP      D   +  S+ +   P+R + E YRVLK G
Sbjct: 78  ILARKPFSAYGVECRL--GEAESLPIDDKGVDYVFANMSLHHVERPERAVAEMYRVLKPG 135

Query: 206 GKACIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256
           G+  I      +F  L +   D WM F + +    WF+ AGF+   +  +G 
Sbjct: 136 GRLIITDMDTHSFEDLRKAHNDRWMGFDR-QTVAGWFESAGFESSHIDSVGS 186


>gi|304310902|ref|YP_003810500.1| UbiE/COQ5 methyltransferase [gamma proteobacterium HdN1]
 gi|301796635|emb|CBL44847.1| UbiE/COQ5 methyltransferase [gamma proteobacterium HdN1]
          Length = 244

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 5/134 (3%)

Query: 81  SIVYDHVINPGHWTEDMRDDALEP-ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
           S  YD +I P      M + AL+  +D+   +  ++D+G G G     + K   +  ++ 
Sbjct: 18  SFSYDKIIAPA--VVQMLEGALQDWSDVLASSKELLDLGCGGGQVLALLAKRYPSLQLSG 75

Query: 140 LDQSPHQLAKAKQKEPL--KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
           +D S  Q+A+A+++        ++ +G A ++P+P  + D  +S  SI++WPDPQRG++E
Sbjct: 76  VDLSYEQVARARKRLDAFSGRAEVKQGSALEIPYPDAHFDTVISIASIKHWPDPQRGLQE 135

Query: 198 AYRVLKLGGKACII 211
             RVLK GG   ++
Sbjct: 136 CVRVLKPGGTLLVV 149


>gi|402571071|ref|YP_006620414.1| methylase [Desulfosporosinus meridiei DSM 13257]
 gi|402252268|gb|AFQ42543.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus meridiei DSM 13257]
          Length = 198

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+D+G GTG     +++ V  A NV  LD +P  LA+A++K      + +EG AE++P  
Sbjct: 42  VLDLGTGTGVLVPLLIEAVGSAGNVVGLDFAPQMLAEARKKYQYPNLEFIEGAAEEIPLT 101

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP----VYPTFWLSRYFADVW 228
               D  V   +  ++ D +R  +E  RVL+ GG+  ++ P          +S   A   
Sbjct: 102 DQAVDEVVCNSAFPHFDDLRRSAQEMARVLRPGGRVTVMHPHSREYINNLHVSLGGAVQN 161

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259
            L P+E+E    F +AGF ++ L+   P+ Y
Sbjct: 162 CLLPEEKEMKSIFAEAGFAEITLED-APQGY 191


>gi|170583757|ref|XP_001896724.1| Ubiquinone biosynthesis methyltransferase ZK652.9 [Brugia malayi]
 gi|158596000|gb|EDP34425.1| Ubiquinone biosynthesis methyltransferase ZK652.9, putative [Brugia
           malayi]
          Length = 283

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 48/206 (23%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK-----EPLK-ECK 160
           N  ++DV GGTG      V+ + +K    +VT+ D + + L   +Q+       LK   K
Sbjct: 88  NTAMIDVAGGTGDIAFRAVRDIQSKKGKGSVTVCDINENMLKVGQQRAIDDPSVLKARLK 147

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI----IGPVY 215
            V GDAE LPF  +  D Y  A  I    +  + +REAYRVL+ GGK AC+    I P+ 
Sbjct: 148 WVRGDAEALPFDENSFDVYTIAFGIRNCTNIDKVLREAYRVLRPGGKFACLEFSHINPLL 207

Query: 216 PTFW--------------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             F+                      RY  +    FP ++EY    ++ GFK+   + + 
Sbjct: 208 KQFYDFYSFQIIPIMGQIIAGDFHSYRYLVESIRRFPDQDEYKRMIEEVGFKNANYRNLS 267

Query: 256 PKWYRGVRRHGLIMGCSV-TGVKPAS 280
                G+        C++ TGVK AS
Sbjct: 268 C----GI--------CAIHTGVKRAS 281


>gi|194335634|ref|YP_002017428.1| ubiquinone/menaquinone biosynthesis methyltransferase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308111|gb|ACF42811.1| ubiquinone/menaquinone biosynthesis methyltransferase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 249

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 31/171 (18%)

Query: 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAE 167
           +NR   ++DV  GTG     + K ++   V+ LD SP  L  A++K P  +   +EG AE
Sbjct: 68  TNRAPRILDVATGTGDLANSMSK-IEGAKVSALDLSPEMLVLARKKYP--QISFIEGYAE 124

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---- 222
            LPF     D  VSAG  +  + +   G+RE YRVLK GG A II P+ P   L +    
Sbjct: 125 KLPFDNASFD-VVSAGFGVRNFENLNEGMREFYRVLKPGGHALIIEPMIPRNALMKKLYL 183

Query: 223 -YFADVW---------------------MLFPKEEEYIEWFQKAGFKDVQL 251
            YF  V                        FP+ E +    +K+GFK    
Sbjct: 184 VYFKKVLPKIAGLFSKSTFAYDYLPHSVEKFPQAEAFTAILKKSGFKQANF 234


>gi|374633969|ref|ZP_09706334.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Metallosphaera yellowstonensis MK1]
 gi|373523757|gb|EHP68677.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Metallosphaera yellowstonensis MK1]
          Length = 229

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +D+G GTG     I  +V   +   LD S   L   K K    + +++ GDA  LPFP++
Sbjct: 85  LDIGTGTG----KIFDYVPCSDCVGLDLSLRFLEILKSKR--SKVRVIRGDATSLPFPSE 138

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE 234
                 S   +    +P  GI E  RVL  GG+ C +G +    +LS + +  W L P+ 
Sbjct: 139 SFQGVNSMLVLHMLNEPAVGISEISRVLVKGGR-CSVGVLVEGGFLSSFLSSWWKLRPRT 197

Query: 235 EEYIE-WFQKAGFKDVQLKRIGP 256
           +EY E   +  G K V ++RIGP
Sbjct: 198 QEYYEKALEGHGLKVVHMERIGP 220


>gi|402593392|gb|EJW87319.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Wuchereria bancrofti]
          Length = 283

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 48/206 (23%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK-----EPLK-ECK 160
           N  ++DV GGTG      V+ + +K    +VT+ D + + L   +Q+       LK   K
Sbjct: 88  NTAMIDVAGGTGDIAFRAVRDIQSKKGKGSVTVCDINENMLKVGQQRAIADPSVLKARLK 147

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI----IGPVY 215
            V GDAE LPF  +  D Y  A  I    +  + +REAYRVL+ GGK AC+    I P+ 
Sbjct: 148 WVRGDAEALPFDENSFDVYTIAFGIRNCTNIDKVLREAYRVLRPGGKFACLEFSHINPLL 207

Query: 216 PTFW--------------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             F+                      RY  +    FP ++EY    ++ GFK+   + + 
Sbjct: 208 KQFYDFYSFQIIPIMGQIIAGDFHSYRYLVESIRRFPDQDEYKRMIEEVGFKNANYRNLS 267

Query: 256 PKWYRGVRRHGLIMGCSV-TGVKPAS 280
                G+        C++ TGVK AS
Sbjct: 268 C----GI--------CAIHTGVKRAS 281


>gi|406913739|gb|EKD53077.1| arsenite S-adenosylmethyltransferase [uncultured bacterium]
          Length = 244

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 113 LVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAED 168
           +V+D+G G GF +    K V D+  V  +D +   L KA++   K  +   +  +GD ED
Sbjct: 75  VVLDLGSGAGFDSFLAAKKVGDSGKVFGVDMTDEMLEKARENAKKGGITNVEFRKGDIED 134

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LP   +  D  +S   I   PD +R  +EAYRVLK GG+  +   V           D  
Sbjct: 135 LPVEDNSIDVIISNCVINLAPDKERVFKEAYRVLKTGGRLMVSDVVLVKPLPEELLNDKE 194

Query: 229 MLFP------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
           +L         +E+Y+   ++AGF D+ + +  P +
Sbjct: 195 LLIGCVSGAILKEDYLSLLEQAGFTDITIHKEIPAF 230


>gi|21674573|ref|NP_662638.1| UbiE/COQ5 family methlytransferase [Chlorobium tepidum TLS]
 gi|21647770|gb|AAM72980.1| methyltransferase, UbiE/COQ5 family [Chlorobium tepidum TLS]
          Length = 275

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 12/197 (6%)

Query: 27  ASDFHGKHIPKLSLIAKPRT-VQSIKCSLSATSRPASQPRFIQHKKEAFWFYRFLSIV-- 83
           A DF     PKL      R  VQ  K S ++    A QP  +   +     Y+ +S    
Sbjct: 11  ADDFGKVSFPKLPCPECFRDGVQGTKKSWASAQNLARQPSRVVVVRAITKRYKTMSYTMN 70

Query: 84  ---YDHVINPGHWTEDMRDDALEPADLSN-RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
              ++  I  GH+ +     A +  + +  R+   VD+GGG G   + + K + +  VT+
Sbjct: 71  AAEFNEKIMKGHFRKIYPVIAAQIVERTGVRSGRCVDLGGGPGMLGVCLAK-ITSLTVTV 129

Query: 140 LDQSPH--QLAKAKQKEP--LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGI 195
           +D  P   +LA+    E    +   +V+G AE LPF     D  VS GSI +W D Q+G+
Sbjct: 130 VDLMPECVELARENSAEAGVAERVDVVQGVAEALPFDDASIDLVVSRGSIFFWEDQQKGL 189

Query: 196 REAYRVLKLGGKACIIG 212
            E YRVL+ GG A I G
Sbjct: 190 AEVYRVLRPGGWAWIGG 206


>gi|348026536|ref|YP_004766341.1| SAM-dependent methyltransferase [Megasphaera elsdenii DSM 20460]
 gi|341822590|emb|CCC73514.1| SAM-dependent methyltransferase [Megasphaera elsdenii DSM 20460]
          Length = 216

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDL 169
           V+D+G G G     +  HV   ++T +D S   +  ++Q         + +I EG  E L
Sbjct: 54  VLDIGCGGGANLRRMSAHVTTGHLTGIDYSATSVQTSRQTNAAAIAAGKMEIYEGSVEAL 113

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---RYFAD 226
           PF  +  D+  +  S  +WP+PQ  ++E  RVLK GG   +I  +Y    LS   R    
Sbjct: 114 PFADNTFDKITTVESFYFWPNPQENLKEVRRVLKPGGTFLLIAEIYGHDGLSAEVRENIK 173

Query: 227 VWMLF-PKEEEYIEWFQKAGFKDVQL 251
            + L+ P  E +   F+ AGF  VQ+
Sbjct: 174 RYHLYNPTPETFETIFRDAGFPSVQV 199


>gi|406902946|gb|EKD45173.1| hypothetical protein ACD_70C00036G0004 [uncultured bacterium]
          Length = 252

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 31/175 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECKIVEGD 165
           N  V+D+ GGTG  TL I K ++A    IL      +    +K  L     K   +V  +
Sbjct: 65  NHCVLDLAGGTGDLTLAIHKKLNASGKIILSDINETMLSTGKKRLLDQGVFKNVSLVLAN 124

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY 215
           AE LPF  +Y DR +    +    D    ++  +RVLK GG A I          + P+Y
Sbjct: 125 AETLPFENNYFDRVIIGFGLRNVTDKDAALKSMHRVLKPGGLALILEFSKPILPGLKPIY 184

Query: 216 PTF------WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             +      WL           RY A+   + P +       + AGF+DV +  +
Sbjct: 185 DAYSFSILPWLGKTLLNDEKSYRYLAESIRMHPDQAALKNMMENAGFEDVNMHNL 239


>gi|227824214|ref|YP_002828187.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium fredii NGR234]
 gi|254789958|sp|C3MCY6.1|UBIE_RHISN RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|227343216|gb|ACP27434.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Sinorhizobium fredii NGR234]
          Length = 258

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGD 165
           N  V+DV GGTG     IV+    K + T+LD +   LA    +A++K  L   + VE +
Sbjct: 71  NYRVLDVAGGTGDIAFRIVEASGRKAHATVLDINGSMLAVGAERARKKGLLGNLEFVEAN 130

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AEDLPF  +  D Y  A  I   P  +  ++EAYRVLK GG+  ++        L   F 
Sbjct: 131 AEDLPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRFY 190

Query: 226 DVW 228
           D W
Sbjct: 191 DAW 193


>gi|150403509|ref|YP_001330803.1| type 11 methyltransferase [Methanococcus maripaludis C7]
 gi|150034539|gb|ABR66652.1| Methyltransferase type 11 [Methanococcus maripaludis C7]
          Length = 218

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ---LAKAKQKEPLKE-CKIVEGDA 166
           N   VD+G G G  ++ + K  D  ++  LD S H     +K  +   L +  +IV+GD 
Sbjct: 43  NGTCVDIGSGPGALSIALAKQTDL-SIIALDFSKHMNEIASKNIEDANLNDRIQIVQGDV 101

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            ++P   DYAD  VS GS+ +W D     RE YR+LK GGK  I G
Sbjct: 102 HNIPIDNDYADLIVSRGSVFFWNDIATSFREIYRILKPGGKTYIGG 147


>gi|312065032|ref|XP_003135592.1| ubiquinone biosynthesis methyltransferase [Loa loa]
 gi|307769225|gb|EFO28459.1| ubiquinone biosynthesis methyltransferase [Loa loa]
          Length = 283

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 48/206 (23%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK-----EPLK-ECK 160
           N  +VDV GGTG      V+ + ++    +VT+ D + + L   +Q+       LK   K
Sbjct: 88  NTSLVDVAGGTGDIAFRAVREIQSRKGTGSVTVCDINENMLRVGQQRAIDDPSVLKARLK 147

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI----IGPVY 215
            V GDAE LPF  +  D Y  A  I       + +REAYRVL+ GGK AC+    I P+ 
Sbjct: 148 WVCGDAEALPFDENSFDIYTIAFGIRNCTSIDKVLREAYRVLRPGGKFACLEFSHINPLL 207

Query: 216 PTFW--------------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
             F+                      RY  +    FP +++Y    ++AGFKD +   + 
Sbjct: 208 KQFYDFYSFQIIPIMGQVIAGDFHSYRYLVESIRKFPDQDKYKRMIEEAGFKDAKYSNLS 267

Query: 256 PKWYRGVRRHGLIMGCSV-TGVKPAS 280
                G+        C++ TGVK AS
Sbjct: 268 C----GI--------CAIHTGVKAAS 281


>gi|452204082|ref|YP_007484215.1| SAM-dependent methyltransferase [Dehalococcoides mccartyi DCMB5]
 gi|452111141|gb|AGG06873.1| SAM-dependent methyltransferase [Dehalococcoides mccartyi DCMB5]
          Length = 206

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLA 148
           G +++ +R+ ALE AD+   N +  D+G GTG+ T G+++    KN  ++  DQS   L 
Sbjct: 20  GFFSDRIREAALEAADVK-PNSIAADIGAGTGYLTTGLLQ----KNCRVIAVDQSAAMLE 74

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           K K K  ++    ++ D   LP      D   +   + +  DP   I E  R+L  GG+ 
Sbjct: 75  KIKSKFGVRNVSCLQADGNALPLKNQSVDYSFANMFLHHAEDPAGVINEMSRILLPGGRL 134

Query: 209 CIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            I      T   + +   D W  F + ++   WF++AG ++++++ +  K
Sbjct: 135 VITDLCLHTHTNMQKEHHDRWPGF-ELKDVKGWFEQAGLQNIRVETLNQK 183


>gi|452205581|ref|YP_007485710.1| SAM-dependent methyltransferase [Dehalococcoides mccartyi BTF08]
 gi|452112637|gb|AGG08368.1| SAM-dependent methyltransferase [Dehalococcoides mccartyi BTF08]
          Length = 206

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLA 148
           G +++ +R+ ALE AD+   N +  D+G GTG+ T G+++    KN  ++  DQS   L 
Sbjct: 20  GFFSDRIREAALEAADVK-PNSIAADIGAGTGYLTTGLLQ----KNCRVIAVDQSAAMLE 74

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           K K K  ++    ++ D   LP      D   +   + +  DP   I E  R+L  GG+ 
Sbjct: 75  KIKSKFGVRNVSCLQADGNALPLKNQSVDYSFANMFLHHAKDPAGVINEMSRILLPGGRL 134

Query: 209 CIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            I      T   + +   D W  F + ++   WF++AG ++++++ +  K
Sbjct: 135 VITDLCLHTHTNMQKEHHDRWPGF-ELKDVKGWFEQAGLQNIRVETLNQK 183


>gi|300855615|ref|YP_003780599.1| methyltransferase [Clostridium ljungdahlii DSM 13528]
 gi|300435730|gb|ADK15497.1| predicted methyltransferase [Clostridium ljungdahlii DSM 13528]
          Length = 210

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%)

Query: 95  EDMRDDALEPADLSN---RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH---QLA 148
           ED  +D L+   LS    +N +  D+G GTGF +L + +  DAK V  LD S +   QL 
Sbjct: 19  EDYFEDKLKYIALSQFNIKNKICADLGCGTGFISLALAQ--DAKLVFSLDNSRNMLKQLH 76

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
                + +K    ++G   DLP   +  D      ++ +  D ++ I E YRVLK  G  
Sbjct: 77  SEALDKSIKNIYPIKGSMSDLPLFDESIDVVFVNMALHHVVDAKKAINEIYRVLKKDGTF 136

Query: 209 CIIG-PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            I     +   W      D W+ F   +   +W + AGFKD+Q++  G K
Sbjct: 137 VICDVEEHDGEWARIEMHDEWLGFS-HKMISDWVKNAGFKDIQVESTGLK 185


>gi|145221333|ref|YP_001132011.1| type 11 methyltransferase [Mycobacterium gilvum PYR-GCK]
 gi|145213819|gb|ABP43223.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
          Length = 236

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 26/215 (12%)

Query: 59  RPASQPRFIQHKKEAFWFYRFLSIVYDH-------VINPGHWTEDMRDDALEPADLSNRN 111
           RPA     IQ    A W  R  S+ YD+       V+   H          EP +  N  
Sbjct: 33  RPAGDAGAIQ----ALWASRLGSLFYDNAQTVMRRVLTAWH----------EPTEWLNLP 78

Query: 112 M--LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           +  + +DVG G G  T  + + V    + + +D S   LA+A   E       +  DA+D
Sbjct: 79  VGGVALDVGSGPGNVTAALGRAVGPGGLALGVDVSEPMLARAVAAEAGPNVGFLRADAQD 138

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADV 227
           LP   +  D  VS   ++  P+P R + E  RVL+ G +  ++ P   P     RY    
Sbjct: 139 LPLSDESVDGVVSIAMLQLIPEPARAVAEMVRVLRSGRRVAVMVPTAGPAAAALRYLPHA 198

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
                 ++E  + F+  G   V+   +G  +W RG
Sbjct: 199 GAHSFGDDELADVFEGLGLTSVRANTVGTIQWVRG 233


>gi|167755585|ref|ZP_02427712.1| hypothetical protein CLORAM_01099 [Clostridium ramosum DSM 1402]
 gi|237734335|ref|ZP_04564816.1| S-adenosylmethionine-dependent methyltransferase [Mollicutes
           bacterium D7]
 gi|365831205|ref|ZP_09372758.1| hypothetical protein HMPREF1021_01522 [Coprobacillus sp. 3_3_56FAA]
 gi|374624880|ref|ZP_09697297.1| hypothetical protein HMPREF0978_00617 [Coprobacillus sp.
           8_2_54BFAA]
 gi|167704524|gb|EDS19103.1| methyltransferase domain protein [Clostridium ramosum DSM 1402]
 gi|229382565|gb|EEO32656.1| S-adenosylmethionine-dependent methyltransferase [Coprobacillus sp.
           D7]
 gi|365262196|gb|EHM92093.1| hypothetical protein HMPREF1021_01522 [Coprobacillus sp. 3_3_56FAA]
 gi|373916163|gb|EHQ47911.1| hypothetical protein HMPREF0978_00617 [Coprobacillus sp.
           8_2_54BFAA]
          Length = 201

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G GTG     ++     +++T +D S   + KAK +   K   +V GD+E+LPF  
Sbjct: 46  VLDLGCGTGALMKQVISEDSHRHLTGIDLSSQMIEKAKHQLKNKATLVV-GDSENLPFFD 104

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADVWMLFP 232
              D      S  ++P+PQ+ I E YRVLK+GG   IIG  Y P   ++R   + ++ F 
Sbjct: 105 QTFDIVYCNDSFHHYPNPQKAIAEIYRVLKIGG-TLIIGDTYLPV--IARQVMNYFIRFN 161

Query: 233 KE 234
           K+
Sbjct: 162 KD 163


>gi|169335379|ref|ZP_02862572.1| hypothetical protein ANASTE_01791 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258117|gb|EDS72083.1| methyltransferase domain protein [Anaerofustis stercorihominis DSM
           17244]
          Length = 212

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query: 62  SQPRFIQ--HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGG 119
           SQ RFI   +K+++   +   +  YD      H  +  +D   E  ++S  +ML  DVG 
Sbjct: 4   SQWRFIMNIYKEKSRHAFNDYAERYDDTNCCNHAKKLYKDIIKEVENISFNSML--DVGC 61

Query: 120 GTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADR 178
           GTG   + I+K+ + K     LD S + +  A  K    E  ++  D+E+LP+  +  D 
Sbjct: 62  GTG-EIINIIKNKNDKAEYYGLDLSENMIKAAGNKLG-NEVDLIVSDSENLPYENNKFDL 119

Query: 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE---- 234
            +   S  ++P+P + + E +RVLK  G   +IG  Y    +SR   +V+M F ++    
Sbjct: 120 ILCNDSFHHYPNPLKVLGEMHRVLKDSG-YLLIGECYQPI-ISREIMNVFMKFGRDGDVK 177

Query: 235 ----EEYIEWFQKAGFKDVQLKRIG 255
               +E+I+   + GFKD+  K++ 
Sbjct: 178 IYSKKEFIKMLNEVGFKDIDYKKVN 202


>gi|359414261|ref|ZP_09206726.1| Methyltransferase type 11 [Clostridium sp. DL-VIII]
 gi|357173145|gb|EHJ01320.1| Methyltransferase type 11 [Clostridium sp. DL-VIII]
          Length = 208

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151
           ++ +++++  ++  D+  RN ++ D+G GTGF +LG+ +  +   V  +DQS + L + K
Sbjct: 21  YFKDEVKEKIIQKLDV--RNKVIGDLGCGTGFISLGLAEQ-NPSIVFAIDQSLNMLRELK 77

Query: 152 Q---KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           +   K+       ++   ++L    +  D      ++ +  +P + I+E +RVLK GGK 
Sbjct: 78  KEITKQNFNNVYPIKSTLDELVLFDESLDAITINMALHHIINPNKSIKEMHRVLKKGGK- 136

Query: 209 CIIGPVYPTF--WLSRYFADVWMLFPKEEEYIEWFQKAGFK-----DVQLKRIGPKWYRG 261
            +I  VY     W      D W+ F  E E  EW + A FK     D +LK IG      
Sbjct: 137 IVISDVYKHNGEWAKEEMHDEWLGFS-ENEIKEWLKDANFKEIEIEDTELKAIGISSEGD 195

Query: 262 VRRHGLIMGCSV 273
             + G+ +  ++
Sbjct: 196 YTKTGIFLATAI 207


>gi|417748604|ref|ZP_12397041.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium avium subsp. paratuberculosis S397]
 gi|336459977|gb|EGO38889.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium avium subsp. paratuberculosis S397]
          Length = 248

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           R  + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ 
Sbjct: 91  RGGVALDVGSGPGNVTASLARAAGPDGLALGVDISEPMLARAVRNEAGPQVGFIKADAQR 150

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LP   +  D  VS   ++  P+PQ  + E  RVL+ GG+  ++ P      L+RY    W
Sbjct: 151 LPLRDNTVDAAVSTAVLQLVPNPQAALVEIARVLRPGGRLAVMVPTAGR--LARY----W 204

Query: 229 MLFPK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
            L P        ++E  +  ++ GF  V++K  G  +W RG
Sbjct: 205 RLLPNVGAHAFDDDEIGDILEENGFASVRVKNFGTFQWVRG 245


>gi|255525181|ref|ZP_05392124.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
 gi|296187434|ref|ZP_06855829.1| methyltransferase domain protein [Clostridium carboxidivorans P7]
 gi|255511140|gb|EET87437.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
 gi|296047956|gb|EFG87395.1| methyltransferase domain protein [Clostridium carboxidivorans P7]
          Length = 209

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           +VI   ++ E ++  AL   D+ ++  +  D+G GTGF +L +++   AK V  +D S +
Sbjct: 15  NVIREEYFEEKLKYTALSQFDIKDK--ICADLGCGTGFISLALLEK--AKIVFSIDNSKN 70

Query: 146 ---QLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
              +L     K+ LK+   + G  E+LP      DR     ++ +  D ++ I E +RVL
Sbjct: 71  MLKELHSTASKKGLKDIYPISGSMENLPLFDKSIDRVFINMALHHIFDAKKAIEEMFRVL 130

Query: 203 KLGGKACIIGPV--YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           K  G A +I  V  +   W      D W+ F   E+   W ++AGF  VQ+
Sbjct: 131 KKDG-AVVITDVEEHNGEWARTEMHDEWLGFS-HEQIKSWLKEAGFSQVQV 179


>gi|427412405|ref|ZP_18902597.1| ubiquinone/menaquinone biosynthesis methyltransferase [Veillonella
           ratti ACS-216-V-Col6b]
 gi|425716212|gb|EKU79196.1| ubiquinone/menaquinone biosynthesis methyltransferase [Veillonella
           ratti ACS-216-V-Col6b]
          Length = 248

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 33/171 (19%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEG 164
           N NM ++DV  GTG  T   ++ + + ++  LD SP  LA+ + +      L +  +VEG
Sbjct: 59  NENMNILDVACGTGMLTKEALRQMPSLHIEALDFSPEMLAQGEVRLAEAGLLDKVNLVEG 118

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT------- 217
           DA +LP+  +  D  +SA ++   PD  + + E  RV+K GG+   +    PT       
Sbjct: 119 DAMNLPYEANTFDCAMSAFALRNVPDIIKTLSEMKRVVKPGGRVVTLELAKPTVIGFKQL 178

Query: 218 FWLSRYFADV---------------WM-----LFPKEEEYIEWFQKAGFKD 248
           ++L  YF  +               W+      +P + + +E+F++ G+KD
Sbjct: 179 YYL--YFEKILPVLGKLSKDQSSYAWLPESLRRYPHQSKVLEYFKQVGYKD 227


>gi|405374440|ref|ZP_11028904.1| methyltransferase, UbiE/COQ5 family [Chondromyces apiculatus DSM
           436]
 gi|397086945|gb|EJJ18023.1| methyltransferase, UbiE/COQ5 family [Myxococcus sp. (contaminant ex
           DSM 436)]
          Length = 269

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 4/103 (3%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA--KAKQKEPLKECKIVEGDAE 167
           + M VVDV  G G  TL ++   +   VT LD +P  ++  +A+  E     +++EGD  
Sbjct: 43  QGMRVVDVAAGPG--TLALLAARNGAQVTALDFAPEMISALRARAAEAQPPVEVLEGDGM 100

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            LPF     D   S   + ++PD +RG RE +RVLK GG+A I
Sbjct: 101 ALPFEEHSFDAAFSMFGLMFFPDRERGFRELHRVLKPGGRAVI 143


>gi|443321751|ref|ZP_21050793.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Gloeocapsa sp. PCC 73106]
 gi|442788521|gb|ELR98212.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Gloeocapsa sp. PCC 73106]
          Length = 206

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 13/158 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           ++D+G GTG T L  + H+  +   + LD S   +  AK+K P    K++ G A+ LPF 
Sbjct: 43  ILDLGCGTG-TLLQSLSHLFPEAQLVGLDFSQEMINIAKKKLP-DSVKLLVGSADHLPFA 100

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM-LF 231
            +  D  +S  +  Y+P+P+  I+EA RVLK  G + +I      +W  R   D W+ LF
Sbjct: 101 DNCFDLVISTSAFHYFPNPRLAIQEANRVLKPKG-SLVISDWCSDYWTCRLL-DFWLRLF 158

Query: 232 PKE-------EEYIEWFQKAGFKDVQLKRIGPKWYRGV 262
            +        +E  + F+  G  ++++ R    W+ G+
Sbjct: 159 NRAHFHTYGVKELQQLFESQGLTEIKIDRYKINWFWGM 196


>gi|410728275|ref|ZP_11366454.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Clostridium sp. Maddingley MBC34-26]
 gi|410596984|gb|EKQ51622.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Clostridium sp. Maddingley MBC34-26]
          Length = 208

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 17/183 (9%)

Query: 79  FLSIVYD-HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           F SI  D + +   ++ +++R+  L+  +++N+  ++ D+G GTGF +LG+V    +KN 
Sbjct: 7   FDSIAIDWNKMRSEYFKDEVRERILQKLEVNNK--VIGDLGCGTGFISLGLV----SKNP 60

Query: 138 TI---LDQSPHQLAKAKQ---KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
            I   +DQS + L + K+   K        ++   ++L    +  D      ++ +   P
Sbjct: 61  NIIFSIDQSINMLKELKKECIKRNYNNIYPIKSTLDELVLYDESLDAITINMALHHIVRP 120

Query: 192 QRGIREAYRVLKLGGKACIIGPVYPTF--WLSRYFADVWMLFPKEEEYIEWFQKAGFKDV 249
            + I+E YRVLK  GK  +I  VY     W      D W+ F  EEE I W + A FK++
Sbjct: 121 DKSIKEMYRVLKSRGKV-VISDVYKHNGKWAKEEMHDEWLGFS-EEEIITWLKGASFKNI 178

Query: 250 QLK 252
           +++
Sbjct: 179 KIE 181


>gi|311748000|ref|ZP_07721785.1| methyltransferase [Algoriphagus sp. PR1]
 gi|126574980|gb|EAZ79338.1| methyltransferase [Algoriphagus sp. PR1]
          Length = 272

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 25/194 (12%)

Query: 78  RFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-N 136
            F    ++  + P H      D  LE A +  +   ++D+  GTG  T  + + V +K N
Sbjct: 19  EFYEKSWEQQLKPAH------DLLLESAQV-KKGESILDIAAGTGLITFKMAEKVGSKGN 71

Query: 137 VTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDLPFPTDYADRYVSAGSIEYWPDPQR 193
           +   D S   +         K    VE    DAE+L   +   D    A  I Y+PDP +
Sbjct: 72  ILATDLSDEMVKIGNNLTSSKSLSNVEFRRMDAENLSIDSGIFDLVTCALGIMYFPDPDK 131

Query: 194 GIREAYRVLKLGG----------KACIIGPVYPTFWLSRYFADVWMLFPK--EEEYIEW- 240
            + E YRVLK GG          K C    ++P    +R  +DV  +F    E++ I+  
Sbjct: 132 ALSEMYRVLKPGGRCAVAIWGSRKKCGWAEIFPIV-DARVSSDVCPMFFNLGEKDVIKLP 190

Query: 241 FQKAGFKDVQLKRI 254
           FQKAGFKDV +++I
Sbjct: 191 FQKAGFKDVSIQKI 204


>gi|73749101|ref|YP_308340.1| SAM-dependent methyltransferase [Dehalococcoides sp. CBDB1]
 gi|289433077|ref|YP_003462950.1| methyltransferase type 11 [Dehalococcoides sp. GT]
 gi|73660817|emb|CAI83424.1| SAM-dependent methyltransferase [Dehalococcoides sp. CBDB1]
 gi|288946797|gb|ADC74494.1| Methyltransferase type 11 [Dehalococcoides sp. GT]
          Length = 206

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLA 148
           G +++ +R+ ALE  D+   N +  D+G GTG+ T G+++    KN  ++  DQS   L 
Sbjct: 20  GFFSDRIREAALEATDVK-PNSIAADIGAGTGYLTTGLLQ----KNCRVIAVDQSAAMLE 74

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           K K K  ++    ++ D   LP      D   +   + +  DP   I E  R+L  GG+ 
Sbjct: 75  KIKSKFGVRNVSCLQADGNTLPLKNQSVDYSFANMFLHHAEDPAGVINEMSRILLPGGRL 134

Query: 209 CIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            I      T   + +   D W  F + ++   WF++AG ++++++ +  K
Sbjct: 135 VITDLCLHTHTNMQKEHHDRWPGF-ELKDVKGWFEQAGLQNIRVETLNQK 183


>gi|408418388|ref|YP_006759802.1| type 11 methyltransferase [Desulfobacula toluolica Tol2]
 gi|405105601|emb|CCK79098.1| predicted methyltransferase, type 11 [Desulfobacula toluolica Tol2]
          Length = 217

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 9/144 (6%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKE-CKIVEGDAEDLP 170
           +D+G G    ++ + +  D  N+  LDQS H  A A    +++ L E    V G+ ED+P
Sbjct: 51  IDLGSGPAALSIALARITDL-NLYALDQSVHSYAIATANIEEQGLAERITPVRGNVEDMP 109

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F  +YAD  VS GS+ +W D +    E YRVLK GGK  I G     F  +     ++M 
Sbjct: 110 FDDNYADLIVSRGSVFFWEDLKAAFNEIYRVLKPGGKTHIGG----GFGSAELKKSIFME 165

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRI 254
             K++       K       +KRI
Sbjct: 166 MAKKDGEFAQKSKGRMNPENMKRI 189


>gi|315925322|ref|ZP_07921533.1| phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621223|gb|EFV01193.1| phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 215

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DVG GT      +V+    ++ T +D +P  +A A QK+ L   + V GD+EDLPF T
Sbjct: 51  LLDVGCGTAPMIERLVEAYPDRHYTGIDLTPRMIAVA-QKKALPNTQFVVGDSEDLPFET 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPVYPTFWL 220
              D  + A S  ++P+PQR     YRVL+ GG+  +       P  WL
Sbjct: 110 ASFDAVICANSFHHYPNPQRFFDGVYRVLRGGGRLILRDYTAARPLLWL 158


>gi|398356009|ref|YP_006401473.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Sinorhizobium fredii USDA 257]
 gi|390131335|gb|AFL54716.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Sinorhizobium fredii USDA 257]
          Length = 258

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  D + + T+LD +   LA    +A++K  L   + VE +AED
Sbjct: 74  VLDVAGGTGDVAFRIVEASDRRAHATVLDINGSMLAVGAERARKKGLLANLEFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF  +  D Y  A  I   P  +  + EA+RVLK GG+  ++        L   F D W
Sbjct: 134 LPFAANSFDAYTIAFGIRNVPRIEVALAEAHRVLKRGGRLLVLEFSDVEMPLLDRFYDAW 193


>gi|284164314|ref|YP_003402593.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
 gi|284013969|gb|ADB59920.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
          Length = 273

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 5/114 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLPF 171
           V+DV  G+G  T  ++      +VT LD  P  + +AK +     +E     GDA+D+PF
Sbjct: 52  VLDVACGSG--TAALIAERRYCDVTGLDYVPGLIERAKTRARANGQEIDFQVGDAQDMPF 109

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           P D  D  +S   +++ PD +R  RE  RV K GGK  + GP+ P  W   +FA
Sbjct: 110 PDDSFDAVLSVYGVQFAPDQERAARELLRVCKPGGKIGLAGPI-PDGWSGDWFA 162


>gi|153933431|ref|YP_001383142.1| UbiE/COQ5 family methlytransferase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936712|ref|YP_001386690.1| UbiE/COQ5 family methlytransferase [Clostridium botulinum A str.
           Hall]
 gi|152929475|gb|ABS34975.1| methyltransferase family protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932626|gb|ABS38125.1| methyltransferase, UbiE/COQ5 family, selenocysteine-containing
           [Clostridium botulinum A str. Hall]
          Length = 268

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 18/181 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V +K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 89  VIDLGSGGGFDCFLASKKVGSKGYIIGVDMTPEMISKSRIMSRKYRYRNVDFRLGEIENL 148

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   + AD  +S   I   P+ QR   EAYRVLK GG+   I  +     L++       
Sbjct: 149 PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRVA-ISDIVLIRELTKEMKQDEK 207

Query: 230 LF-------PKEEEYIEWFQKAGFKDVQL------KRIGPKWYRGVRRHGLIMGCSVTGV 276
           L+          EE   + +KAGF D+++      K    KW   ++    IM  S+  +
Sbjct: 208 LYCGUVTGASSVEELKLYLEKAGFSDIRIDTQEVSKEYAEKWGHNLKVGEYIMSASIKAI 267

Query: 277 K 277
           K
Sbjct: 268 K 268


>gi|289450244|ref|YP_003475399.1| methyltransferase domain-containing protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184791|gb|ADC91216.1| methyltransferase domain protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 204

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 14/155 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKE--CKIVEGDAEDL 169
           V+D+G G G      +K     ++T LD SP  +A +++  ++ + E  C+IVEGD   L
Sbjct: 45  VLDIGCGGGSNVASWIKRCPKGHITGLDHSPVSVAASQKYNQKAISENRCQIVEGDVSRL 104

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
            F  +  D   +  ++ +WP  +   +E +RVLK GG   I+  V  T        D WM
Sbjct: 105 TFAENTFDAVSAFETVYFWPGLENCFQEVFRVLKKGGTFLIVNEVDGT----NPKQDKWM 160

Query: 230 LFP------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
                    KE +  +  QKAGF +++       W
Sbjct: 161 NIVEGLKIYKESDLTKRLQKAGFSNIRAFHTDKHW 195


>gi|254820547|ref|ZP_05225548.1| methyltransferase type 11 [Mycobacterium intracellulare ATCC 13950]
          Length = 248

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ LP 
Sbjct: 94  IALDVGSGPGNVTASLARAAGPDGLALGVDISEPMLARAVRNEAGPQVGFIKADAQRLPL 153

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             +  D  VS   ++  PDP+  + E  RVL+ GG+  I+ P      L+RY    W L 
Sbjct: 154 RDNTFDAAVSTAVLQLVPDPKAALAEIARVLRPGGRVAIMVPTAGR--LARY----WQLL 207

Query: 232 PK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
           P        ++E  +  +  GF  V++K +G  +W R
Sbjct: 208 PNVGAHAFDDDEIGDTLEDNGFSSVRVKNVGTFQWVR 244


>gi|379749770|ref|YP_005340591.1| type 11 methyltransferase [Mycobacterium intracellulare ATCC 13950]
 gi|379757069|ref|YP_005345741.1| type 11 methyltransferase [Mycobacterium intracellulare MOTT-02]
 gi|379764592|ref|YP_005350989.1| type 11 methyltransferase [Mycobacterium intracellulare MOTT-64]
 gi|387878438|ref|YP_006308742.1| type 11 methyltransferase [Mycobacterium sp. MOTT36Y]
 gi|406033339|ref|YP_006732231.1| methyl transferase type 11 [Mycobacterium indicus pranii MTCC 9506]
 gi|443308224|ref|ZP_21038010.1| type 11 methyltransferase [Mycobacterium sp. H4Y]
 gi|378802134|gb|AFC46270.1| methyltransferase type 11 [Mycobacterium intracellulare ATCC 13950]
 gi|378807285|gb|AFC51420.1| methyltransferase type 11 [Mycobacterium intracellulare MOTT-02]
 gi|378812534|gb|AFC56668.1| methyltransferase type 11 [Mycobacterium intracellulare MOTT-64]
 gi|386791896|gb|AFJ38015.1| type 11 methyltransferase [Mycobacterium sp. MOTT36Y]
 gi|405131884|gb|AFS17139.1| methyl transferase type 11 [Mycobacterium indicus pranii MTCC 9506]
 gi|442763340|gb|ELR81339.1| type 11 methyltransferase [Mycobacterium sp. H4Y]
          Length = 248

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ LP 
Sbjct: 94  IALDVGSGPGNVTASLARAAGPDGLALGVDISEPMLARAVRNEAGPQVGFIKADAQRLPL 153

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             +  D  VS   ++  PDP+  + E  RVL+ GG+  I+ P      L+RY    W L 
Sbjct: 154 RDNTFDAAVSTAVLQLVPDPKAALAEIARVLRPGGRVAIMVPTAGR--LARY----WQLL 207

Query: 232 PK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
           P        ++E  +  +  GF  V++K +G  +W R
Sbjct: 208 PNVGAHAFDDDEIGDTLEDNGFSSVRVKNVGTFQWVR 244


>gi|328545944|ref|YP_004306053.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Polymorphum gilvum SL003B-26A1]
 gi|326415684|gb|ADZ72747.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Polymorphum gilvum SL003B-26A1]
          Length = 306

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 31/179 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPL 156
           L P   + R  +V+DV GGTG     IV+         +LD +   LA    +A +    
Sbjct: 110 LAPPRSAVRPWIVLDVAGGTGDIATRIVERSGGTAKAVVLDINGSMLAVGRDRAAKAGHA 169

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI----- 210
              +  +G+AE LPFP    D Y  A  I   PD  R +REA+RVLK GG+  C+     
Sbjct: 170 DAIRFTQGNAETLPFPDRSFDAYTIAFGIRNVPDIPRALREAHRVLKRGGRFLCLEFSEV 229

Query: 211 ----IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
               +  VY  F  +                RY  +    FP +  + E  ++AGF+ V
Sbjct: 230 DVPMLDRVYDAFSFNAIPAIGQAVTGDGEPYRYLVESIRKFPNQARFAEMIREAGFERV 288


>gi|78187551|ref|YP_375594.1| ubiquinone/menaquinone biosynthesis methyltransferase [Chlorobium
           luteolum DSM 273]
 gi|78167453|gb|ABB24551.1| demethylmenaquinone methyltransferase [Chlorobium luteolum DSM 273]
          Length = 249

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     ++K  +AK V+ LD SP  L  A++K P    +  +G AE+LPF  
Sbjct: 74  ILDVATGTGDLAAAMMKITNAK-VSALDLSPEMLTIARKKYP--SIEFTQGCAEELPF-K 129

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           D +   VSAG  +  + D ++G++E +RVLK GG A II P+ P
Sbjct: 130 DASFDIVSAGFGVRNFEDLKKGMQEFHRVLKPGGHALIIEPMIP 173


>gi|357038392|ref|ZP_09100190.1| Methyltransferase type 11 [Desulfotomaculum gibsoniae DSM 7213]
 gi|355359967|gb|EHG07727.1| Methyltransferase type 11 [Desulfotomaculum gibsoniae DSM 7213]
          Length = 230

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 5/117 (4%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDL 169
           M V+D+G GTG  TL + +      VT LD SP  LA+A+ K      + ++++GDA  L
Sbjct: 42  MSVLDIGCGTGNYTLLLSRQ--GLRVTGLDISPGMLARARAKAEEAHLDVELLQGDATAL 99

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226
           PF  +  D  +S  ++E+ P P + +REAYRVLK GG+  ++G +       RY+AD
Sbjct: 100 PFGDNSFDAVLSVSALEFMPHPDKVLREAYRVLKPGGR-LVVGVLGQDSAWGRYYAD 155


>gi|374294018|ref|YP_005041041.1| putative Phosphatidylethanolamine N-methyltransferase [Azospirillum
           lipoferum 4B]
 gi|357427421|emb|CBS90365.1| putative Phosphatidylethanolamine N-methyltransferase [Azospirillum
           lipoferum 4B]
          Length = 616

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 18/182 (9%)

Query: 85  DHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP 144
           DH   P +   D +  A+         M ++DVGGG G  T    +  D   VT++D S 
Sbjct: 405 DHPTTPFYRIYDEKRRAVAAELERAPRMRILDVGGGYGRITGPFAERHD---VTLVDISH 461

Query: 145 HQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKL 204
             LA+AK++ P     + + DA  LPFP D  D  ++   + + PD + G+RE  RV+K 
Sbjct: 462 EMLAEAKERFP--ALAVQQADARKLPFPDDSFDLVIAMDLLCHLPDLEAGVRELQRVVKP 519

Query: 205 GGK-ACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVR 263
           GG+ AC      P  W+  Y             Y  W        ++   + P+W   VR
Sbjct: 520 GGRIACDTTNANP-LWVVAY-----------PSYYRWRPDRLLATMRCHGVLPEWKALVR 567

Query: 264 RH 265
            H
Sbjct: 568 HH 569


>gi|307352813|ref|YP_003893864.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307156046|gb|ADN35426.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
          Length = 218

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKE-CKIVEGDAED 168
           + +D G G+G   + + K +    V ++D  P     A++   +E L + C+ V+GD  D
Sbjct: 45  ICIDAGAGSGMLGISLAK-ITGLEVVLMDLLPENRKYAEENTRQEKLDDRCRFVQGDITD 103

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +PF  +YAD  +S GSI +W D +    E  RVLK GGK  I G
Sbjct: 104 MPFEDEYADLVISRGSIFFWDDLKSAFTEILRVLKPGGKTFIGG 147


>gi|118472123|ref|YP_884514.1| methyltransferase [Mycobacterium smegmatis str. MC2 155]
 gi|399984524|ref|YP_006564872.1| type 11 methyltransferase [Mycobacterium smegmatis str. MC2 155]
 gi|441201756|ref|ZP_20970905.1| methyltransferase [Mycobacterium smegmatis MKD8]
 gi|118173410|gb|ABK74306.1| methyltransferase [Mycobacterium smegmatis str. MC2 155]
 gi|399229084|gb|AFP36577.1| Methyltransferase type 11 [Mycobacterium smegmatis str. MC2 155]
 gi|440630446|gb|ELQ92217.1| methyltransferase [Mycobacterium smegmatis MKD8]
          Length = 237

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+D+G G G  T  + +      + + +D S   LA+A   E  ++   V  DA+ LPF 
Sbjct: 85  VLDIGCGPGNITAQLARAAGLDGLALGVDISEPMLARAVAAEAGRQVGFVRADAQQLPFR 144

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----GPVYPTFWLSRYFADVW 228
            +  D   S    +  PDP   + E  RVLK GG+  I+    G V P  +L+R  A ++
Sbjct: 145 DEVFDAATSLAVFQLIPDPVAAVSEIVRVLKPGGRVAIMVPTAGAVKPVTFLARGGARIF 204

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKRIG-PKWYRGVR 263
                ++E  + F+  G   V++K  G  +W RG +
Sbjct: 205 ----GDDELGDIFENVGLVGVRVKTHGFIQWVRGTK 236


>gi|28211797|ref|NP_782741.1| methyltransferase, 3-demethylubiquinone-9 3-methyltransferase
           [Clostridium tetani E88]
 gi|28204239|gb|AAO36678.1| methyltransferase, putative 3-demethylubiquinone-9
           3-methyltransferase [Clostridium tetani E88]
          Length = 207

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 13/155 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFP 172
           ++DVG GTG     ++   +      LD S   L  AK+K  LK+  I+  GD+E++P+ 
Sbjct: 51  ILDVGCGTGSILFLLLYEKENIKAYGLDISEEMLNVAKEK--LKDKAILTLGDSENMPYK 108

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
            ++ D  +   S  ++P+P   ++E +R LK  G   I    Y T++  R F ++++ F 
Sbjct: 109 DEFFDVVICTDSFHHYPNPLNVLKEIHRTLKERGVLIICD--YWTYFPKRQFMNLFIPFS 166

Query: 233 K--------EEEYIEWFQKAGFKDVQLKRIGPKWY 259
           K        ++E     Q+A FKD+    I  + Y
Sbjct: 167 KDGDVRIYSQKEICNLLQRANFKDINWNMINKRTY 201


>gi|332707792|ref|ZP_08427819.1| methylase involved in ubiquinone/menaquinone biosynthesis [Moorea
           producens 3L]
 gi|332353495|gb|EGJ33008.1| methylase involved in ubiquinone/menaquinone biosynthesis [Moorea
           producens 3L]
          Length = 282

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           ++D+  GTG   +   K V A    + +D S   L  A+QK   E L   K +E DAE +
Sbjct: 49  ILDIATGTGLVAILAAKVVGASGAVVGVDISSGMLNLAQQKVKAEGLNNIKFIEADAETI 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK---ACIIGPVYPTFWLSRY-FA 225
            FP +  DR + + +I Y  D    +R+ YR +K GG    +C     +PT  L R   A
Sbjct: 109 NFPDNSFDRILCSSAIVYLTDIPAALRQWYRFVKPGGLVGFSCFAANAFPTGGLFREKAA 168

Query: 226 DVWMLFPK-------EEEYIEWFQKAGFKDVQLK 252
           D  ++ P         E+  +   +AGF+D+ +K
Sbjct: 169 DYGIVIPNPNGPLGSPEKCHQLLTEAGFQDINVK 202


>gi|154484032|ref|ZP_02026480.1| hypothetical protein EUBVEN_01740 [Eubacterium ventriosum ATCC
           27560]
 gi|149735074|gb|EDM50960.1| methyltransferase domain protein [Eubacterium ventriosum ATCC
           27560]
          Length = 204

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 12/150 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+G GTG     I +   +K++T +D S   +  A +K+ +     V GD EDLPF  
Sbjct: 49  ILDLGCGTGELLYQIQQIYHSKDLTGIDISDKMIDIANRKK-INNAHFVMGDTEDLPFKN 107

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADVWMLFP 232
              D  V   S  ++P P++ + EAYRVLK  G   IIG  + P F  +R   +++M + 
Sbjct: 108 STFDIVVCNDSFHHYPAPEKVLDEAYRVLKDSG-IIIIGDCWQPLF--ARQLMNLYMKYS 164

Query: 233 KEEEYIEWFQKA-------GFKDVQLKRIG 255
           KE +   + +K         F +V  +RIG
Sbjct: 165 KEGDVKIYSKKEMINLLLNKFHNVNWERIG 194


>gi|420242350|ref|ZP_14746408.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF080]
 gi|398067879|gb|EJL59351.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF080]
          Length = 258

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 31/166 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+  D K +VT+LD +   LA    +A++K   +    VE +AE L
Sbjct: 75  LDVAGGTGDVAFRIVEASDRKAHVTVLDINGSMLAVGAERAEKKHLSENLSFVEANAESL 134

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG------PVYPTFWLS-- 221
           PF  +  D Y  A  I   P     ++EAYRVLK GG+  ++       P+   F+    
Sbjct: 135 PFEANSFDAYTIAFGIRNVPHIDVALQEAYRVLKRGGRLLVLEFSEVEMPLLERFYEEWS 194

Query: 222 ------------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                             +Y  +    FP +E +    + AGF  V
Sbjct: 195 FKAIPRFGKMITGDAEPYQYLVESIRKFPNQENFAAMIRNAGFSRV 240


>gi|304315861|ref|YP_003851006.1| type 11 methyltransferase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777363|gb|ADL67922.1| Methyltransferase type 11 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 209

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 28/181 (15%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKA---KQKEPLKECKIVEGDAEDL 169
           V+D+G G G   L   K +  K + + LD +   + KA   ++K  +K  + + GD E++
Sbjct: 39  VLDLGCGRGNDILNAAKTIGEKGIAVGLDLTKRMIEKAEKNREKLNIKNVEFIVGDVENI 98

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-----------PTF 218
           P      D  +S   I +  D ++  RE YRVLK GG+  +   V            P  
Sbjct: 99  PLQDGKFDVVISDCVINHAKDKEKVYREIYRVLKDGGRFVVSDVVSIDRLPEEIVNDPDA 158

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ-LKRIGPKWYRGVRRHG-LIMGCSVTGV 276
           W     AD +     EE+YI+  + AGFKDVQ LKR      R  +++G L+   ++ G 
Sbjct: 159 W-----ADCFGGAILEEDYIKAIKNAGFKDVQYLKR------REYKKNGYLVASITIKGF 207

Query: 277 K 277
           K
Sbjct: 208 K 208


>gi|45358742|ref|NP_988299.1| methyltransferase [Methanococcus maripaludis S2]
 gi|45047608|emb|CAF30735.1| SAM (and some other nucleotide) binding motif:Generic
           methyltransferase [Methanococcus maripaludis S2]
          Length = 218

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ----LAKAKQKEPLKECKIVEGDAEDLP 170
           +D+G G G  ++ + K  D   +  LD S H     L      +     +IV+GD  ++P
Sbjct: 47  IDIGSGPGALSIALAKQSDFS-IRALDFSKHMNEIALKNIADADLNDRIQIVQGDVHNIP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
              +YAD  VS GS+ +W D     RE YR+LK GGK  I G
Sbjct: 106 IEDNYADLIVSRGSVFFWEDVTTAFREIYRILKSGGKTYIGG 147


>gi|116624352|ref|YP_826508.1| transcriptional regulator [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227514|gb|ABJ86223.1| transcriptional regulator [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 304

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAED 168
           M++ D+G G G  T+  +    AK V  +D S   +   A+  +K  +   +   GD ED
Sbjct: 143 MVIADLGAGEG--TISQLMAQRAKRVIAIDNSEKMVEFGAELARKHGIANLEYRLGDLED 200

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADV 227
           +P  T   D    + ++ +   P+R I EA R+LK GG+  I+      F  +R  +AD+
Sbjct: 201 VPIRTGTVDLAFLSQALHHAVHPERAIAEASRILKKGGRIAILDLSRHHFEEAREMYADL 260

Query: 228 WMLFPKEEEYIEWFQK-AGFKDVQ 250
           W+ F + E  IE F K AGFK+V+
Sbjct: 261 WLGFTELE--IERFLKGAGFKNVE 282


>gi|227827734|ref|YP_002829514.1| type 11 methyltransferase [Sulfolobus islandicus M.14.25]
 gi|229585005|ref|YP_002843507.1| type 11 methyltransferase [Sulfolobus islandicus M.16.27]
 gi|238619906|ref|YP_002914732.1| type 11 methyltransferase [Sulfolobus islandicus M.16.4]
 gi|385773409|ref|YP_005645975.1| type 11 methyltransferase [Sulfolobus islandicus HVE10/4]
 gi|385776054|ref|YP_005648622.1| type 11 methyltransferase [Sulfolobus islandicus REY15A]
 gi|227459530|gb|ACP38216.1| Methyltransferase type 11 [Sulfolobus islandicus M.14.25]
 gi|228020055|gb|ACP55462.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.27]
 gi|238380976|gb|ACR42064.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.4]
 gi|323474802|gb|ADX85408.1| Methyltransferase type 11 [Sulfolobus islandicus REY15A]
 gi|323477523|gb|ADX82761.1| Methyltransferase type 11 [Sulfolobus islandicus HVE10/4]
          Length = 232

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           LVVDVG GTG     I   ++ K    +D S   L   K+K P  +   V  DA +LP  
Sbjct: 84  LVVDVGTGTG----KIFDFLNCKTCIGIDVSLRFLTYMKRKRP--KVIAVRADANNLPLK 137

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           +  AD   S   +    +P   IRE YRVLK  GK  I         +++  +  W ++ 
Sbjct: 138 SGIADGISSTLVLHMLSNPSFAIREMYRVLKSNGKCSIAVLANVNSLIAKILSRWWKVYL 197

Query: 233 KE-EEYIEWFQKAGFKDVQLKRIGP 256
           +  + YI   Q+   K V+ K +GP
Sbjct: 198 RHYDYYINLLQENSLKVVERKELGP 222


>gi|260433199|ref|ZP_05787170.1| menaquinone biosynthesis methyltransferase UbiE [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417027|gb|EEX10286.1| menaquinone biosynthesis methyltransferase UbiE [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 265

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 14/134 (10%)

Query: 91  GHWTEDMRDDALEPADLSNRNML------------VVDVGGGTGFTTLGIVKHVDAK-NV 137
           G  T  + D A + AD+S R               ++D+G GTG  T  + + V  +  V
Sbjct: 5   GKSTAQLLDMAYQGADVSRRRRANFDAIAPAPGEAILDLGCGTGLLTAELARAVGPQGQV 64

Query: 138 TILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIR 196
           T LD SP  LA A+ +        +VEG A D+P P    D+ VS    EY+ DP   + 
Sbjct: 65  TGLDTSPDMLAAAQGRCNEFDHVDLVEGSAFDMPVPDRQFDKAVSVQVFEYFADPSPALT 124

Query: 197 EAYRVLKLGGKACI 210
           E +RVL+ GG+  I
Sbjct: 125 ELHRVLRPGGRLVI 138


>gi|119356315|ref|YP_910959.1| demethylmenaquinone methyltransferase [Chlorobium phaeobacteroides
           DSM 266]
 gi|119353664|gb|ABL64535.1| demethylmenaquinone methyltransferase [Chlorobium phaeobacteroides
           DSM 266]
          Length = 252

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 29/162 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     I K   AK VT LD SP  L  A++K P      +EG AE LPF T
Sbjct: 77  ILDVATGTGDLAASIAKLPGAK-VTGLDLSPEMLELARKKYP--AITFLEGYAEKLPFDT 133

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFADVW 228
              D   +   +  + + Q+G+ E +RVLK GG   II P+ P   L +     YF  V 
Sbjct: 134 ASFDAVSAGFGVRNFENLQQGMSEFHRVLKPGGYTFIIEPMIPRNPLMKKLYLIYFKKVL 193

Query: 229 ---------------------MLFPKEEEYIEWFQKAGFKDV 249
                                  FP+ E + E  +KAGF+ V
Sbjct: 194 PKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAV 235


>gi|326789431|ref|YP_004307252.1| methyltransferase type 11 [Clostridium lentocellum DSM 5427]
 gi|326540195|gb|ADZ82054.1| Methyltransferase type 11 [Clostridium lentocellum DSM 5427]
          Length = 205

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 17/152 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DVG GTG     I+          +D S   L  A+ K P K  ++++GDAE +PF  
Sbjct: 47  VLDVGCGTGSLLYEILDRKPQVKAVGVDFSEEMLKVARDKLP-KRVELIQGDAEAIPFEN 105

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP- 232
              D  V +  + Y  +PQ  IRE YRVLK+GGK      V   F  +     V  LF  
Sbjct: 106 KRFDVVVGSDILRYTTNPQLMIREMYRVLKVGGKI-----VLCDFCTASSLRAVKNLFNP 160

Query: 233 ----------KEEEYIEWFQKAGFKDVQLKRI 254
                      E+E  E+  K+GF  V   ++
Sbjct: 161 LSKDGGLRIYAEDEVKEFLSKSGFDFVNYTKV 192


>gi|196230059|ref|ZP_03128922.1| transcriptional regulator, TrmB [Chthoniobacter flavus Ellin428]
 gi|196225656|gb|EDY20163.1| transcriptional regulator, TrmB [Chthoniobacter flavus Ellin428]
          Length = 307

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 7/146 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAE 167
           +M++ D+G G G  +  + K   AK V  +D S   +   +   +K   K  +   G+ E
Sbjct: 145 SMVIADLGAGEGTLSQLLAKR--AKKVIAVDNSEKMVEFGSGLAKKHGFKNLEYRLGEME 202

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFAD 226
           + P P +  D  + + ++ + P+PQR I  A+ +LK GG+  ++  +   F  +R  +AD
Sbjct: 203 EPPIPANSVDLALLSQALHHAPNPQRAITAAHHILKKGGRIAVLDLLAHQFEEARELYAD 262

Query: 227 VWMLFPKEEEYIEWFQKAGFKDVQLK 252
            W+ F  E +  ++ ++AGF +++++
Sbjct: 263 RWLGFS-EADLQQFLEEAGFHEIEVQ 287


>gi|118462307|ref|YP_884344.1| methyltransferase type 11 [Mycobacterium avium 104]
 gi|118163594|gb|ABK64491.1| methyltransferase type 11 [Mycobacterium avium 104]
          Length = 248

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 15/160 (9%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           R  + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ 
Sbjct: 91  RGGVALDVGSGPGNVTASLARAAGPDGLALGIDISEPMLARAVRNEAGPQVGFIKADAQR 150

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LP   +  D  VS   ++  P+PQ  + E  RVL+ GG+  ++ P      L+RY    W
Sbjct: 151 LPLRDNTVDAAVSTAVLQLVPNPQAALVEIARVLRPGGRLAVMVPTAGR--LARY----W 204

Query: 229 MLFPK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
            L P        ++E  +  ++ GF  V++K  G  +W R
Sbjct: 205 RLLPNVGAHAFDDDEIGDILEENGFASVRVKNFGTFQWVR 244


>gi|169827853|ref|YP_001698011.1| methyltransferase [Lysinibacillus sphaericus C3-41]
 gi|168992341|gb|ACA39881.1| methyltransferase [Lysinibacillus sphaericus C3-41]
          Length = 239

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 15/159 (9%)

Query: 107 LSNRNML----VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKECK 160
           L N ++L    ++DVG GTG T   +  +    NVT +D +P  + KA+   K+      
Sbjct: 37  LKNESILPTSHILDVGCGTGQTAAFLASYY-TTNVTGIDINPIMIEKARHRMKKARLPVN 95

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL 220
           I++G  E+   P    D +V A S+  +   QR ++E +R+LK GG+   I    PT   
Sbjct: 96  IIQGSIEETSLPNGAFD-FVLAESVLSFVHKQRALQEIFRLLKQGGRLIAIEFTIPTLLS 154

Query: 221 SRYFADVWM------LFPKEEEYIEWFQKAGFKDVQLKR 253
           S+   D+        LF K ++++  FQ+ GF+D+++++
Sbjct: 155 SQLADDIQQFYGFDALFTK-KDWVALFQEIGFQDIRIQK 192


>gi|315441783|ref|YP_004074662.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium gilvum Spyr1]
 gi|315260086|gb|ADT96827.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium gilvum Spyr1]
          Length = 236

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 26/215 (12%)

Query: 59  RPASQPRFIQHKKEAFWFYRFLSIVYDH-------VINPGHWTEDMRDDALEPADLSNRN 111
           RPA     IQ    A W  R  S+ YD+       V+   H          EP +  N  
Sbjct: 33  RPAGDAGAIQ----ALWASRLGSLFYDNAQTVMRRVLTAWH----------EPTEWLNLP 78

Query: 112 M--LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           +  + +DVG G G  T  + + V    + + +D S   LA+A   E       +  DA+D
Sbjct: 79  VGGVALDVGSGPGNVTAALGRAVGPGGLALGVDVSEPMLARAVAAEAGPNVGFLRADAQD 138

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADV 227
           LP   +  D  VS   ++  P+P + + E  RVL+ G +  ++ P   P     RY    
Sbjct: 139 LPLSDESVDGVVSIAMLQLIPEPAQAVAEMVRVLRPGRRVAVMVPTAGPAAAALRYLPHA 198

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
                 ++E  + F+  G   V+   +G  +W RG
Sbjct: 199 GAHSFGDDELADVFEGLGLTSVRANTVGTIQWVRG 233


>gi|150398755|ref|YP_001329222.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium medicae WSM419]
 gi|166234751|sp|A6UFF7.1|UBIE_SINMW RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|150030270|gb|ABR62387.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium medicae WSM419]
          Length = 258

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    K   T+LD +   L+    +A++K      + VE +AED
Sbjct: 74  VLDVAGGTGDIAFRIVERSGRKAQATVLDINGSMLSVGAERARKKGIEANLEFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF  +  D Y  A  I   P  +  +REAYRVLK GG+  ++        L   F D W
Sbjct: 134 LPFAANSFDAYTIAFGIRNVPRIEVALREAYRVLKRGGRLLVLEFSEVEMPLLDRFYDAW 193


>gi|110597865|ref|ZP_01386148.1| ubiquinone/menaquinone biosynthesis methyltransferases [Chlorobium
           ferrooxidans DSM 13031]
 gi|110340590|gb|EAT59073.1| ubiquinone/menaquinone biosynthesis methyltransferases [Chlorobium
           ferrooxidans DSM 13031]
          Length = 249

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K   AK VT LD SP  L  A++K P  +   +EG AE LPF  
Sbjct: 74  ILDVATGTGDLAASMAKIAGAK-VTALDLSPEMLVLARKKYP--DITFLEGYAEKLPF-N 129

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           D +   VSAG  +  + D ++G++E +RVLK GG   II P+ P
Sbjct: 130 DASFDIVSAGFGVRNFEDLEKGMQEFHRVLKPGGHTLIIEPMIP 173


>gi|323487440|ref|ZP_08092735.1| hypothetical protein HMPREF9474_04486 [Clostridium symbiosum
           WAL-14163]
 gi|323399209|gb|EGA91612.1| hypothetical protein HMPREF9474_04486 [Clostridium symbiosum
           WAL-14163]
          Length = 212

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ----KEPLKECKIVEGDAED 168
           ++ D G G G  T  ++K   A  VT LD S     K KQ    +     C +V+GD   
Sbjct: 51  MIADFGCGGGRNTAALLKRFPAATVTALDYSKVACDKTKQFNRHEVQSGRCNVVQGDVSR 110

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV- 227
           LPF     D   +  ++ +WP P    +E +RVLK GG   I+     T      + D+ 
Sbjct: 111 LPFEAATFDVITAFETVYFWPGPVESFQEVWRVLKPGGTFMIVNESDGTKQADEKWTDII 170

Query: 228 -WMLFPKEEEYIEWFQKAGFKDV 249
             M    +E+  ++ + AGF  +
Sbjct: 171 DGMRIFTQEQLTQYLKDAGFSQI 193


>gi|452990486|emb|CCQ98334.1| Methyltransferase type 11 [Clostridium ultunense Esp]
          Length = 231

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
           G + + +    +E      R    +D+G GTG  +L +       +VT LD +   LA A
Sbjct: 20  GRFVDRIEKGMIESLAQPQRGEEALDLGAGTGNYSLWLADQ--GVHVTGLDPAREMLAIA 77

Query: 151 KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           ++K+  ++ + VEGDA DLPF        +S  ++E+  +PQ+ +REA RVLK GG+  +
Sbjct: 78  REKDGDQKVRWVEGDAHDLPFMDSSFHLVISVTALEFMMEPQKVLREAMRVLKPGGRIVL 137


>gi|425451484|ref|ZP_18831305.1| putative methyltransferase [Microcystis aeruginosa PCC 7941]
 gi|389767166|emb|CCI07337.1| putative methyltransferase [Microcystis aeruginosa PCC 7941]
          Length = 262

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 20/190 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ +REA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLREAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVR 263
             + W+R  R
Sbjct: 203 TEECWFRHFR 212


>gi|256827588|ref|YP_003151547.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Cryptobacterium curtum DSM 15641]
 gi|256583731|gb|ACU94865.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Cryptobacterium curtum DSM 15641]
          Length = 262

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 43/208 (20%)

Query: 84  YDHVINPGH---WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           ++H  + G    W E + D  L P + ++R   V+DV GGTG  T  + +     ++ + 
Sbjct: 51  FNHASSFGQDRKWLERLAD--LAPINSTSR---VLDVAGGTGEVTFTLCRRYHPASILLT 105

Query: 141 DQSPHQLAKAKQKEPLKE-------CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQR 193
           D +P  L  AK++    +       C++V  DA+D+PF     D    A  I   PD  R
Sbjct: 106 DYTPGMLEVAKKRITAGDARSVDVSCQVV--DAQDMPFADASFDVVTMAYGIRNMPDRLR 163

Query: 194 GIREAYRVLKLGGKACIIGPVYPTFWLSR--------------------------YFADV 227
            +RE +RVL  GG   I+    PT  + R                          Y A  
Sbjct: 164 ALREIHRVLVPGGTVVILEFSQPTRPIERAFYRAYLKWGIPAWGQHFTGKRDDFVYLAQS 223

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
              FP  E + +    AGF  V  +R+ 
Sbjct: 224 IKAFPDCETFADMLHGAGFSQVTYERVA 251


>gi|312115340|ref|YP_004012936.1| type 11 methyltransferase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220469|gb|ADP71837.1| Methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100]
          Length = 275

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DV  G G +T  + +  + +NVT ++ S  QLA A+ + P   C  ++ DA  L FP 
Sbjct: 64  VLDVACGPGASTQRLCRSYEPRNVTAINISEAQLASARDRAP--GCTFIKMDAAHLDFPA 121

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
           +  D  +   +  ++   Q  +REA RVLK GG   +   ++  F   +   +   + P 
Sbjct: 122 ESFDAVMCVEAAFHFDTRQSFLREAARVLKPGGTLVMTDMLFRGFM--KPIGNFGQVPPA 179

Query: 234 E-----EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRH 265
                 +EY     KAGF D+ ++        G RRH
Sbjct: 180 NFMRDLDEYRARMAKAGFVDIDVRDATHACLDGFRRH 216


>gi|425443970|ref|ZP_18824033.1| putative methyltransferase [Microcystis aeruginosa PCC 9443]
 gi|389732677|emb|CCI03445.1| putative methyltransferase [Microcystis aeruginosa PCC 9443]
          Length = 262

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 20/190 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ +REA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLREAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVR 263
             + W+R  R
Sbjct: 203 TEECWFRHFR 212


>gi|425434218|ref|ZP_18814689.1| putative methyltransferase [Microcystis aeruginosa PCC 9432]
 gi|389676686|emb|CCH94324.1| putative methyltransferase [Microcystis aeruginosa PCC 9432]
          Length = 262

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 20/190 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ +REA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLREAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVR 263
             + W+R  R
Sbjct: 203 TEECWFRHFR 212


>gi|268592336|ref|ZP_06126557.1| methyltransferase, UbiE/COQ5 family [Providencia rettgeri DSM 1131]
 gi|291312121|gb|EFE52574.1| methyltransferase, UbiE/COQ5 family [Providencia rettgeri DSM 1131]
          Length = 253

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G   F    +VK V A +++  D   + +AK  Q+  L      +G AE LP
Sbjct: 46  VLDLGCGAGHASFHAAPLVKSVTAYDLS--DSMLNVVAKNAQERELNNITTCKGTAESLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  DR +S  S  +W D ++ +RE  RVLK GGK   I  V P
Sbjct: 104 FDDNCFDRVISRYSAHHWHDVEQALREVRRVLKAGGKGIFIDVVSP 149


>gi|440635723|gb|ELR05642.1| hypothetical protein GMDG_01832 [Geomyces destructans 20631-21]
          Length = 318

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 38/171 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE---PLKECKIVE- 163
           ++D+ GGTG     ++ H    N      VT+ D +P  LA+ +++    P    K ++ 
Sbjct: 121 ILDIAGGTGDIAFRMLDHAHNVNHSPHTRVTVSDINPDMLAEGRKRSLETPYANSKNLDF 180

Query: 164 --GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-----IIGPVY 215
              +AE+LP P +  D Y  A  I  + D ++ +REAYRVLK GG  AC     +  P++
Sbjct: 181 LVANAEELPIPDNSVDLYTVAFGIRNFTDKEKALREAYRVLKPGGVFACLEFSGVTNPLF 240

Query: 216 PTFWLSRYFADVWML--------------------FPKEEEYIEWFQKAGF 246
              +    F  + ++                    FP+++E+    Q AGF
Sbjct: 241 EAVYKRWSFGAIPLIGQLVAGDRASYQYLVESIEKFPRQDEWKNMIQAAGF 291


>gi|75907797|ref|YP_322093.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413]
 gi|75701522|gb|ABA21198.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413]
          Length = 207

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED 168
            +N  V+DV  G+G  T  +VK+  ++NVT LD SP  L +A+Q  P  E   VE  AE 
Sbjct: 44  EKNTSVLDVCCGSGQATQLLVKY--SQNVTGLDASPLSLRRARQNVP--EANYVEAFAEK 99

Query: 169 LPFPTDYAD-RYVSAGSIEYWPDPQRG-IREAYRVLKLGGKACII---GPVYPTFW 219
           +PFP    D  + SA   E  P   R  I+E YRVLK GG   ++    P  P FW
Sbjct: 100 MPFPDKQFDVVHTSAALHEMEPQQLREIIQEVYRVLKPGGIFTLVDFHTPTNPIFW 155


>gi|378828549|ref|YP_005191281.1| ubiquinone/menaquinone biosynthesis [Sinorhizobium fredii HH103]
 gi|365181601|emb|CCE98456.1| ubiquinone/menaquinone biosynthesis [Sinorhizobium fredii HH103]
          Length = 258

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV     + + T+LD +   LA    +A++K  L   + VE +AED
Sbjct: 74  VLDVAGGTGDIAFRIVDASGRRAHATVLDINGSMLAVGAERARKKGLLGNLEFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF  +  D Y  A  I   P  +  ++EAYRVLK GG+  ++
Sbjct: 134 LPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVL 176


>gi|336324537|ref|YP_004604504.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Flexistipes sinusarabici DSM 4947]
 gi|336108118|gb|AEI15936.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Flexistipes sinusarabici DSM 4947]
          Length = 226

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)

Query: 98  RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK 157
           R  A+E  ++   N  ++D+  GTG     + +     ++   D S + L KAK+K+P  
Sbjct: 35  RKKAIELLEVKE-NHKILDLACGTGDMIGELKRQTKNSDIIGADFSKNMLFKAKRKQP-- 91

Query: 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           +  ++ GDA  LPF  D  DR + A       D  +G+ E +RV+K GG+ CI+    P 
Sbjct: 92  DIMLLAGDAHSLPFKPDSFDRVMIAFGFRNVTDKNKGLEELFRVVKPGGRLCILEFSQPE 151

Query: 218 -FWLSR-------------------------YFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
            F  SR                         Y  D    FP + EY +   ++GF+ VQ 
Sbjct: 152 GFVFSRLYRLYFTKILPFLGGLISGDRRAYEYLPDSVYKFPPKNEYKKMIIESGFERVQF 211


>gi|314933653|ref|ZP_07841018.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           caprae C87]
 gi|313653803|gb|EFS17560.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           caprae C87]
          Length = 241

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + K VD K +VT LD S + L   K+K   L   K+V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSKAVDNKGHVTGLDFSENMLEVGKEKTSSLNNVKLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L +     YF  
Sbjct: 114 DNTFD-YVTVGFGLRNVPDYLVALQEMHRVLKPGGMVVCLETSQPTLPLFKQVYRLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK--DVQ-LKRI 254
           V      +F K +E  EW Q++ F   D Q LKR+
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFNFPDKQTLKRL 207


>gi|258646843|ref|ZP_05734312.1| methyltransferase type 11 [Dialister invisus DSM 15470]
 gi|260404280|gb|EEW97827.1| methyltransferase type 11 [Dialister invisus DSM 15470]
          Length = 251

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 6/147 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKE--CKIVEGDA 166
           N  ++D+G G G      +K V   +VT +D SP  +  +  + ++ + E  C + EG A
Sbjct: 45  NEKILDIGCGGGINLSRFLKKVPRGHVTGIDLSPDCVNYSFMRNRDAIAEGRCSVYEGSA 104

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226
           E LPF  ++ D   +  +I +WP+    ++E  RVLK GG   I+       +L   +  
Sbjct: 105 ELLPFGANHFDVITAFETIYFWPNLPNTLKEIKRVLKPGGTFLIVNEADGYGFLDNLYPK 164

Query: 227 VW--MLFPKEEEYIEWFQKAGFKDVQL 251
           +   M   K EE      KAGF ++++
Sbjct: 165 IIKGMTLYKTEELSAILTKAGFTNIEI 191


>gi|402573422|ref|YP_006622765.1| methylase [Desulfosporosinus meridiei DSM 13257]
 gi|402254619|gb|AFQ44894.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus meridiei DSM 13257]
          Length = 223

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 6/171 (3%)

Query: 87  VINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ 146
            ++ G +++  R  A   A +     L  D+G GTG+   G++   +   V  +D S   
Sbjct: 16  TMSQGFFSDTARQKAYSLAAVE-EGKLAADIGTGTGYLAEGLIH--NGLRVIAVDSSEAM 72

Query: 147 LAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLG 205
           L + KQK   +      +G+AE LP   D  D  ++   + +  DP   I+E  R+LK  
Sbjct: 73  LNQMKQKFADINTIDYRQGEAEKLPIDNDTVDYAMANMYLHHVEDPFIAIKEMVRILKPE 132

Query: 206 GKACIIGPVYPTF-WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
           GK  +       F +L +   D WM F + E+  +W  KAG K+V ++  G
Sbjct: 133 GKLVLTDLDQHNFEFLRKEHHDRWMGFTR-EDVKQWLLKAGLKNVSIECAG 182


>gi|126650768|ref|ZP_01722984.1| Methyltransferase [Bacillus sp. B14905]
 gi|126592433|gb|EAZ86451.1| Methyltransferase [Bacillus sp. B14905]
          Length = 235

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 95  EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ-- 152
           E M+++ + PA        ++DVG GTG T   +  H  A +VT +D +P  + KA+   
Sbjct: 31  EIMKNERILPASH------ILDVGCGTGQTAAFLASHY-AAHVTGIDINPIMIEKARHRM 83

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           K+      +++G  E+   P +  D +V A S+  + + QR ++E +R+LK GG+   I 
Sbjct: 84  KKGHLSVNVIQGSIEETTLPNEAFD-FVLAESVLAFVNKQRALQEIFRLLKEGGRLIAIE 142

Query: 213 PVYPTFWLSRYFADVWMLFP-----KEEEYIEWFQKAGFKDVQLKR 253
              P    +    D+   +       +++++  FQ+ GF+D+++++
Sbjct: 143 FTVPMLLSTLQADDIQQFYGFDALLTKKDWVALFQETGFQDIRIQK 188


>gi|451947078|ref|YP_007467673.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfocapsa sulfexigens DSM 10523]
 gi|451906426|gb|AGF78020.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfocapsa sulfexigens DSM 10523]
          Length = 265

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 16/181 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDL 169
           V+D+G G GF +   VK V ++  V  +D +P  ++KA+Q   +   + V+   G+ E+L
Sbjct: 85  VLDLGSGGGFDSFLAVKEVGESGQVIGVDMTPEMVSKARQNSDISGYENVDFRLGELENL 144

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P      D  +S   I   P  +R  REA+RVLK GG+  I   V           D+ M
Sbjct: 145 PIADGIIDVIISNCVINLSPKKERVFREAFRVLKQGGRLAISDIVATAEMPGDVKEDMAM 204

Query: 230 LF------PKEEEYIEWFQKAGFKDVQLKRIGP------KWYRGVRRHGLIMGCSVTGVK 277
                      +E     Q+AGF+++Q+++          W  G +    ++  ++  VK
Sbjct: 205 YTGCIAGASYVQELESMLQQAGFENIQIRQKDESKTFIRNWAPGSKVEDYVVSATIEAVK 264

Query: 278 P 278
           P
Sbjct: 265 P 265


>gi|225164443|ref|ZP_03726701.1| transcriptional regulator, ArsR family [Diplosphaera colitermitum
           TAV2]
 gi|224800941|gb|EEG19279.1| transcriptional regulator, ArsR family [Diplosphaera colitermitum
           TAV2]
          Length = 310

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDLP 170
           + D+G G G  +  + +   A+ V  +D SP  +    +   K  L       GD E +P
Sbjct: 150 IADLGAGEGLISQLLARR--ARQVWCIDNSPRMVEVGTELAAKNGLANLTYKLGDIERVP 207

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADVWM 229
            P    D  + + ++ +   PQR + EA+R+LK GG+  ++     +F  +R  +ADVW+
Sbjct: 208 LPDASVDLAILSQALHHAQHPQRAVAEAWRILKPGGQLHVLDLKEHSFEKARELYADVWL 267

Query: 230 LFPKEEEYIEWFQKAGFKDV 249
            F KE    ++ +KAGF+ V
Sbjct: 268 GF-KETALHDYLRKAGFQQV 286


>gi|17231242|ref|NP_487790.1| methyltransferase [Nostoc sp. PCC 7120]
 gi|17132884|dbj|BAB75449.1| methyltransferase [Nostoc sp. PCC 7120]
          Length = 207

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           N  V+DV  G+G  T  +VK   ++NVT LD SP  L +A+Q  P  E   VE  AE +P
Sbjct: 46  NTSVLDVCCGSGQATQLLVK--SSQNVTGLDASPLSLQRARQNVP--EANYVEAFAEKMP 101

Query: 171 FPTDYAD-RYVSAGSIEYWPDPQRG-IREAYRVLKLGGKACII---GPVYPTFW 219
           FP +  D  + SA   E  P   R  I+E YRVLK GG   ++    P  P FW
Sbjct: 102 FPDNQFDIVHTSAALHEMEPQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFW 155


>gi|298245425|ref|ZP_06969231.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
 gi|297552906|gb|EFH86771.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
          Length = 258

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDL 169
           +VVDV  GTG T L +  H  A+ V  +D +   L    K  Q+  +   + +EGDA  L
Sbjct: 46  VVVDVATGTGHTALALAPH--AREVVAIDFTAPMLEAGRKLAQERHIANVRFIEGDAHAL 103

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           P P  YAD      S  ++ D  + +RE  R+LK GG+  +I  + P
Sbjct: 104 PLPDTYADAVACRHSAHHFVDLPQAVREWARLLKPGGRLVLIDAIVP 150


>gi|120401137|ref|YP_950966.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119953955|gb|ABM10960.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
          Length = 236

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 8/195 (4%)

Query: 72  EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM--LVVDVGGGTGFTTLGIV 129
           +A W  R  S+ YD   N       +     +P +  N  +    +DVG G G  T  + 
Sbjct: 42  QALWASRLGSMFYD---NAQTLARRLMTAWQQPTEWLNVPVGGTALDVGSGPGNVTGALG 98

Query: 130 KHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188
           + V    + + +D S   LA+A + E       +  DA+ LPF  +  D  VS   ++  
Sbjct: 99  RAVGPGGLALGVDISEPMLARAVRAEAGPNVGFIRADAQHLPFRDESFDAVVSIAMLQLI 158

Query: 189 PDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK 247
           PDP   + E  RVL+ G +  ++ P   P   L RY  +       ++E  + F+  G  
Sbjct: 159 PDPAVALAEMVRVLRPGRRMAVMVPTAGPAAGLLRYLPNAGAHAFGDDELGDTFESLGLA 218

Query: 248 DVQLKRIGP-KWYRG 261
            V++  +G  +W RG
Sbjct: 219 GVRINTVGTIQWVRG 233


>gi|374582577|ref|ZP_09655671.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus youngiae DSM 17734]
 gi|374418659|gb|EHQ91094.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus youngiae DSM 17734]
          Length = 197

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 8/152 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN-VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+D+G GTG     ++  V +   V  +D +P  LA+A++K      + +EG AE +P  
Sbjct: 41  VLDLGTGTGVLIPMLMDAVGSSGAVVAIDFAPQMLAEARKKYQWTNLEFLEGAAEAIPLA 100

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW---- 228
               D  V   +  ++ D +R  +E  RVL+ GG+  ++ P +   +++   A +     
Sbjct: 101 DQVVDEVVCNSAFPHFDDLRRAAQEMARVLRRGGRVTVMHP-HSREYINELHASLGGAVE 159

Query: 229 -MLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259
             L P+EE     F +AGF+ + L+ + P+ Y
Sbjct: 160 NCLLPEEEVMQTIFTEAGFESITLEDV-PQRY 190


>gi|428225247|ref|YP_007109344.1| type 11 methyltransferase [Geitlerinema sp. PCC 7407]
 gi|427985148|gb|AFY66292.1| Methyltransferase type 11 [Geitlerinema sp. PCC 7407]
          Length = 227

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 27/167 (16%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQL--AKAK 151
           D   D  EP +       + D G GT   +L + + + A N  I+  D SP  L  A+AK
Sbjct: 57  DYLQDGFEPKN-------ICDCGIGTAAFSLALAQTI-APNTQIIGVDLSPEMLKTAQAK 108

Query: 152 QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG----- 206
             +   + ++  GD   LPF     D  +SA  +E+ PDP+ G++E +RVL+ G      
Sbjct: 109 LAKAHIQHQVCRGDVRTLPFENSVFDAVISAHMLEHLPDPREGLKEMFRVLRPGAPLILV 168

Query: 207 --KACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
             ++ I+G +    W +R F+          E +    +AGF ++++
Sbjct: 169 VTRSGILGSLIQWHWGNRCFS--------PNELVALMDEAGFSNLKV 207


>gi|217979647|ref|YP_002363794.1| ArsR family transcriptional regulator [Methylocella silvestris BL2]
 gi|217505023|gb|ACK52432.1| transcriptional regulator, ArsR family [Methylocella silvestris
           BL2]
          Length = 335

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAEDLP 170
           ++D+G GTG   L ++  + A+ V + DQSP  LA A+   ++  L+  ++ +GD   LP
Sbjct: 159 LLDLGAGTG-RMLELLAPLAARAVGV-DQSPQMLAVARARLERAGLRNTQLRQGDIYALP 216

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII--GPVYPTFWLSRYFADVW 228
              D+ D  V    + Y  DP R IREA R L+ GG+  I+   P +    L    A   
Sbjct: 217 VEPDHYDLVVMHQVLHYLDDPLRAIREATRALRPGGRLLIVDFAPHHEEH-LRAAHAHRR 275

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKR-IGPKWYRG 261
           + F  EE  I  F +A   DV L+R + P    G
Sbjct: 276 LGFAAEE--IAGFMQASGLDVALRRDLAPNLSEG 307


>gi|118578487|ref|YP_899737.1| ArsR family transcriptional regulator [Pelobacter propionicus DSM
           2379]
 gi|118501197|gb|ABK97679.1| transcriptional regulator, ArsR family [Pelobacter propionicus DSM
           2379]
          Length = 309

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V++VG GTG   L +     A+ V  +D SP  L +A+++     L++ ++  G+   LP
Sbjct: 147 VLEVGVGTGSLLLELA--TGARQVIGVDHSPAMLEEARRRVEAAGLEKVELRLGEMTHLP 204

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-YPTFWLSRYFADVWM 229
            P +     V    + + PDP   +RE  RVL   G   +     +   W+    AD W+
Sbjct: 205 LPNESVGCVVVNMVLHHAPDPPAVLREIRRVLAPDGLLLVADLTRHEREWVREQLADQWL 264

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR 260
            F +E+E   W Q AGF    ++RI P   R
Sbjct: 265 GF-EEDELRVWLQSAGFAATTMERIAPAAGR 294


>gi|345857266|ref|ZP_08809711.1| ubiE/COQ5 methyltransferase family protein [Desulfosporosinus sp.
           OT]
 gi|344329644|gb|EGW40977.1| ubiE/COQ5 methyltransferase family protein [Desulfosporosinus sp.
           OT]
          Length = 199

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+D+G GTG     +++ V  +  +  +D +P  LA+A++K      + +EG+AED+P  
Sbjct: 41  VLDLGTGTGVLIPMLIEAVGLSGGIVAIDFAPQMLAEAQKKYQWPNLEFMEGNAEDIPLA 100

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW---- 228
               D  V   +  ++ D ++  +E +RVLK GG+  ++ P +   +++   A +     
Sbjct: 101 DQAVDEVVCNSAFPHFDDLRKAAQEMFRVLKNGGRVSVLHP-HSREYINDLHASLGGAVK 159

Query: 229 -MLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258
             + P  +     F +AGF+++ ++ +  ++
Sbjct: 160 NCMIPHADVMQAIFSEAGFENITIENVTQRY 190


>gi|312136582|ref|YP_004003919.1| type 11 methyltransferase [Methanothermus fervidus DSM 2088]
 gi|311224301|gb|ADP77157.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088]
          Length = 182

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 101 ALEPADLSNRNM-LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL----AKAKQKEP 155
           AL+  ++S  N  + +DVG G GF  + + KH + K V  +D SP  +        +K+ 
Sbjct: 12  ALDILEISKINEGICIDVGTGNGFLAIELAKHSNLK-VFAIDISPKMIDIAKKHVAKKKL 70

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           LK+  +   D   +PFPT++AD  VS GS+ +W +  +   E YRVLK GG A I G
Sbjct: 71  LKKVIVKHADVHRMPFPTNFADLVVSRGSMFFWENRTKAFNEIYRVLKPGGFAYIGG 127


>gi|197305105|pdb|3DLC|A Chain A, Crystal Structure Of A Putative
           S-Adenosyl-L-Methionine-Dependent Methyltransferase
           (Mmp1179) From Methanococcus Maripaludis At 1.15 A
           Resolution
          Length = 219

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 5/102 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQ----LAKAKQKEPLKECKIVEGDAEDLP 170
           +D+G G G  ++ + K  D   +  LD S H     L            +IV+GD  ++P
Sbjct: 48  IDIGSGPGALSIALAKQSDFS-IRALDFSKHXNEIALKNIADANLNDRIQIVQGDVHNIP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
              +YAD  VS GS+ +W D     RE YR+LK GGK  I G
Sbjct: 107 IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148


>gi|254777574|ref|ZP_05219090.1| methyltransferase type 11 [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 248

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           R  + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ 
Sbjct: 91  RGGVALDVGSGPGNVTASLARAAGPDGLALGIDISEPMLARAVRNEAGPQVGFIKADAQR 150

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LP   +  D  VS   ++  P PQ  + E  RVL+ GG+  ++ P      L+RY    W
Sbjct: 151 LPLRDNTVDAAVSTAVLQLVPKPQAALVEIARVLRPGGRLAVMVPTAGR--LARY----W 204

Query: 229 MLFPK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
            L P        ++E  +  ++ GF  V++K  G  +W R
Sbjct: 205 RLLPNVGAHAFDDDEIGDILEENGFASVRVKNFGTFQWVR 244


>gi|189347495|ref|YP_001944024.1| ubiquinone/menaquinone biosynthesis methyltransferase [Chlorobium
           limicola DSM 245]
 gi|189341642|gb|ACD91045.1| ubiquinone/menaquinone biosynthesis methyltransferase [Chlorobium
           limicola DSM 245]
          Length = 241

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K +    VT LD SP  L  A++K P  +    EG AE LPF T
Sbjct: 66  ILDVATGTGDLAASMAK-IPGAEVTALDLSPEMLVIARKKYP--DITFYEGYAEKLPFDT 122

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
              D  VSAG  +  + + ++G+RE +RVLK GG A II P+ P
Sbjct: 123 ASFD-VVSAGFGVRNFENLEQGMREFHRVLKPGGHAFIIEPMIP 165


>gi|333397319|ref|ZP_08479132.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           gelidum KCTC 3527]
 gi|406600751|ref|YP_006746097.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           gelidum JB7]
 gi|406372286|gb|AFS41211.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           gelidum JB7]
          Length = 247

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    + + +  DA  +VT LD S   LA  ++K  + +      +++GDA  
Sbjct: 63  IIDLATGTADWAIALAEKSDATTDVTGLDFSEEMLAIGQKKVDVSDFSNKITLIQGDAMA 122

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF  D  D       +   PDP RG++E YRVLK GG+  I+       P+   FW   
Sbjct: 123 LPFEDDTFDIVTIGFGLRNLPDPVRGLQEMYRVLKSGGQLVILETSQPDNPLVKPFW-QL 181

Query: 223 YFADVWMLFPK 233
           YF  V  +F K
Sbjct: 182 YFGKVMPIFGK 192


>gi|148265045|ref|YP_001231751.1| type 11 methyltransferase [Geobacter uraniireducens Rf4]
 gi|146398545|gb|ABQ27178.1| transcriptional regulator, ArsR family [Geobacter uraniireducens
           Rf4]
          Length = 305

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLAKAKQKEPLKECKIVE---GDAED 168
           VV++G GTG    G++  + AK   ++  D SP  L +A+++  L     ++   GD   
Sbjct: 149 VVEIGLGTG----GLLPALAAKASRVIGVDHSPAMLEEARRRLALAGLAGIDLRLGDMTH 204

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-YPTFWLSRYFADV 227
           LP P   AD  V    + +  DP   +RE  RVL  GG   +     +   W+    AD 
Sbjct: 205 LPLPDKAADCAVLNMVLHHAADPAAVLREIRRVLTAGGVLVLADLARHEREWVRERLADQ 264

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           W+ F  E+E   W   AGF DV+ +R+
Sbjct: 265 WLGF-DEDELTSWLAAAGFFDVRCERL 290


>gi|300174180|ref|YP_003773346.1| menaquinone biosynthesis methyltransferase [Leuconostoc
           gasicomitatum LMG 18811]
 gi|333447793|ref|ZP_08482735.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           inhae KCTC 3774]
 gi|299888559|emb|CBL92527.1| menaquinone biosynthesis methyltransferase [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 236

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 15/141 (10%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    + + +  D   +VT LD S   LA  ++K  + +      +++GDA  
Sbjct: 52  IIDLATGTADWAIALAEKSDTTADVTGLDFSEEMLAIGQKKVDVSDFSNKITLIQGDAMA 111

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF  D  D       +   PDP RG++E YRVLK GG+  I+       P+   FW   
Sbjct: 112 LPFEDDTFDIVTIGFGLRNLPDPVRGLQEMYRVLKSGGQLVILETSQPDNPLVKPFW-QL 170

Query: 223 YFADVWMLFPK---EEEYIEW 240
           YF  V  +F K   + +YIE+
Sbjct: 171 YFGKVMPIFGKVFAKGKYIEY 191


>gi|383481927|ref|YP_005390842.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rhipicephali str. 3-7-female6-CWPP]
 gi|378934266|gb|AFC72769.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rhipicephali str. 3-7-female6-CWPP]
          Length = 248

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA+RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEAFRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIVGNKEAYEYLVESIELFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|296132753|ref|YP_003640000.1| type 11 methyltransferase [Thermincola potens JR]
 gi|296031331|gb|ADG82099.1| Methyltransferase type 11 [Thermincola potens JR]
          Length = 252

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVE-GDAEDLPF 171
           ++DVG GTGF  L + +     N T LD S   L +AK+K   LK   + + GDAE LP 
Sbjct: 53  ILDVGTGTGFLALLLAEM--GHNCTGLDISDKMLEQAKKKGTNLKNRPVFDFGDAEALPL 110

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL----SRYFADV 227
           P +  D   +   +   PDPQ+ + E  RVLK GGK  +I  V+ +  L     R   ++
Sbjct: 111 PDNCMDVVANRHLLWTLPDPQKALTEWLRVLKPGGKLVVINGVWGSIGLPAKARRLIGNI 170

Query: 228 WMLFPKE------------------------EEYIEWFQKAGFKDVQL 251
            ++  +                         EE I   ++AG +DVQ+
Sbjct: 171 MIMLAEHRNPWKDGYSNEVKEQLPLYGDVPPEEIIRLMREAGVEDVQM 218


>gi|433654015|ref|YP_007297723.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Thermoanaerobacterium thermosaccharolyticum M0795]
 gi|433292204|gb|AGB18026.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Thermoanaerobacterium thermosaccharolyticum M0795]
          Length = 209

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 28/181 (15%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKA---KQKEPLKECKIVEGDAEDL 169
           V+D+G G G   L   K +  K + + LD +   + +A   ++K  +K  + + GD E++
Sbjct: 39  VLDLGCGRGNDILNAAKTIGEKGIAVGLDLTKRMIEEAEKNREKLNIKNVEFIVGDVENI 98

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-----------PTF 218
           P      D  +S   I +  D ++  RE YRVLK GG+  +   V            P  
Sbjct: 99  PLQDGKFDVVISDCVINHAKDKEKVYREIYRVLKDGGRFVVSDVVSIDRLPEEIVNDPDA 158

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ-LKRIGPKWYRGVRRHG-LIMGCSVTGV 276
           W     AD +     EE+YI+  + AGFKDVQ LKR      R  +++G L+   ++ G 
Sbjct: 159 W-----ADCFGGAILEEDYIKAIKNAGFKDVQYLKR------REYKKNGYLVASITIKGF 207

Query: 277 K 277
           K
Sbjct: 208 K 208


>gi|298674701|ref|YP_003726451.1| type 11 methyltransferase [Methanohalobium evestigatum Z-7303]
 gi|298287689|gb|ADI73655.1| Methyltransferase type 11 [Methanohalobium evestigatum Z-7303]
          Length = 264

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVE---GDAED 168
           +V+D+G G GF        VD   + I +D +P  + KAK          VE   G+ E+
Sbjct: 78  VVLDLGSGAGFDCFLAADKVDEDGLVIGVDMTPDMVEKAKNNAVKDNYTNVEFRLGEIEN 137

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV----YPTFWLSRYF 224
           LP   +  D  +S   I   PD ++   + YRVLK  G+  +   V     P    +   
Sbjct: 138 LPLDDNSVDVVISNCVINLSPDKEKVFNDVYRVLKPDGRLVVSDIVLLQDLPESIRNSIE 197

Query: 225 ADVWMLFP--KEEEYIEWFQKAGFKDVQL 251
           A V  +    K+E+Y++  +KAGFKD+Q+
Sbjct: 198 AYVGCISGALKKEDYLDLIEKAGFKDIQI 226


>gi|242373778|ref|ZP_04819352.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis M23864:W1]
 gi|242348515|gb|EES40117.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis M23864:W1]
          Length = 262

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 85/178 (47%), Gaps = 25/178 (14%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKA 150
           H  +DMR +    A         +DV  GT   T+ + K V D+  VT LD S + L   
Sbjct: 61  HVMKDMRVEEGSKA---------LDVCCGTADWTIALSKAVGDSGQVTGLDFSENMLEVG 111

Query: 151 KQKEP-LKECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKA 208
           K+K   L   ++V GDA +LPF  +  D YV+ G  +   PD    ++E +RVLK GGK 
Sbjct: 112 KEKTASLNNVELVHGDAMNLPFEDNTFD-YVTVGFGLRNVPDYLGALKEMHRVLKPGGKV 170

Query: 209 CII---GPVYPTF--WLSRYFADVW----MLFPKEEEYIEWFQKAGFK--DVQ-LKRI 254
             +    P  P F    S YF  V      +F K +E  EW Q++ F   D Q LKR+
Sbjct: 171 VCLETSQPTLPVFKQVYSLYFKFVMPIFGKMFAKSKEEYEWLQQSTFNFPDKQTLKRL 228


>gi|227876917|ref|ZP_03995013.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256843742|ref|ZP_05549230.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus 125-2-CHN]
 gi|256850190|ref|ZP_05555620.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus MV-1A-US]
 gi|262047812|ref|ZP_06020762.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus MV-3A-US]
 gi|293379831|ref|ZP_06625953.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus 214-1]
 gi|312978108|ref|ZP_07789853.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           crispatus CTV-05]
 gi|423318958|ref|ZP_17296834.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus FB049-03]
 gi|423320616|ref|ZP_17298488.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus FB077-07]
 gi|227863474|gb|EEJ70897.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256615162|gb|EEU20363.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus 125-2-CHN]
 gi|256713162|gb|EEU28153.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus MV-1A-US]
 gi|260571869|gb|EEX28440.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus MV-3A-US]
 gi|290923603|gb|EFE00484.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus 214-1]
 gi|310895083|gb|EFQ44152.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           crispatus CTV-05]
 gi|405591621|gb|EKB65099.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus FB049-03]
 gi|405602406|gb|EKB75539.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus crispatus FB077-07]
          Length = 233

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)

Query: 98  RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQK 153
           R   L   DL N+N + +D+  G+  +T+ + K   AK VT LD +   L     K +QK
Sbjct: 38  RKKFLRQLDL-NKNSICLDLCCGSADSTIDLTKK--AKLVTGLDFNQEMLKIAQKKIRQK 94

Query: 154 EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
           +   + K++ GDA +LPF  +  D       +   PD  + I+E+YRVLK GG+  ++  
Sbjct: 95  QLQSKIKLIAGDAMNLPFAANSFDCVTICFGLRNVPDAVKTIQESYRVLKPGGQFAVLEM 154

Query: 214 VYPTFWLSR-----------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             PT  L +           YFA +     K+ +Y+    K      QLK++
Sbjct: 155 SQPTNALVKLGWQAYFKIFPYFAKLTHGNIKDYQYLSKTSKEFLSAEQLKKL 206


>gi|108763479|ref|YP_631242.1| UbiE/COQ5 family methlytransferase [Myxococcus xanthus DK 1622]
 gi|108467359|gb|ABF92544.1| methyltransferase, UbiE/COQ5 family [Myxococcus xanthus DK 1622]
          Length = 269

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA--KAKQKEPLKECKIVEGDAEDLPF 171
           VVDV  G G  TL ++   D   VT +D SP  +A  + +  E   +  I+EGD   LPF
Sbjct: 47  VVDVATGPG--TLALLAARDGARVTAVDFSPEMIAALRGRTAEAKLDVDILEGDGMALPF 104

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
             +  D   S   + ++PD  RG +E +RVLK GG+A +
Sbjct: 105 EANAFDAAFSMFGLMFFPDRARGFQELHRVLKPGGRAVV 143


>gi|53802801|ref|YP_115452.1| phosphatidylethanolamine N-methyltransferase [Methylococcus
           capsulatus str. Bath]
 gi|53756562|gb|AAU90853.1| phosphatidylethanolamine N-methyltransferase [Methylococcus
           capsulatus str. Bath]
          Length = 216

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 83  VYDHVINPGHWTEDMRDDALEPADLSNRNM-LVVDVGGGTGFTTLGIVKHVDAKNVTILD 141
           VYDH      W  + R  +L  A L+NR    +++VG GTG +     K      V  +D
Sbjct: 16  VYDHTFG---WLLNFRGRSLA-AHLTNRRPGRILEVGVGTGISLPFYRK---EHQVHGID 68

Query: 142 QSPHQLAKAKQKEPLKE----CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
            SPH L +A+++   K      ++   DA ++ FP DY D  V+A  +   P+PQR +RE
Sbjct: 69  ISPHMLERARRRVHSKNLDHVVRLEIMDAREMAFPDDYFDAVVAAYVMSVVPEPQRVLRE 128

Query: 198 AYRVLKLGGKACIIG 212
             RV K GG   I+ 
Sbjct: 129 IERVCKAGGDVIIVN 143


>gi|295693498|ref|YP_003602108.1| ubiquinone/menaquinone biosynthesis methyltransferase ubie
           [Lactobacillus crispatus ST1]
 gi|295031604|emb|CBL51083.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Lactobacillus crispatus ST1]
          Length = 233

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)

Query: 98  RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQK 153
           R   L   DL N+N + +D+  G+  +T+ + K   AK VT LD +   L     K +QK
Sbjct: 38  RKKFLRQLDL-NKNSICLDLCCGSADSTIDLAKK--AKLVTGLDFNQEMLKIAQKKIRQK 94

Query: 154 EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
           +   + K++ GDA +LPF  +  D       +   PD  + I+E+YRVLK GG+  ++  
Sbjct: 95  QLQSKIKLIAGDAMNLPFAANSFDCVTICFGLRNVPDAVKTIQESYRVLKPGGQFAVLEM 154

Query: 214 VYPTFWLSR-----------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             PT  L +           YFA +     K+ +Y+    K      QLK++
Sbjct: 155 SQPTNALVKLGWQAYFKIFPYFAKLTHGNIKDYQYLSKTSKEFLSAEQLKKL 206


>gi|15964117|ref|NP_384470.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti 1021]
 gi|334318393|ref|YP_004551012.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti AK83]
 gi|384531519|ref|YP_005715607.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti BL225C]
 gi|384538245|ref|YP_005722330.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti SM11]
 gi|407722705|ref|YP_006842367.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti Rm41]
 gi|433612150|ref|YP_007188948.1| bifunctional ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti GR4]
 gi|15073293|emb|CAC41801.1| Probable ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti 1021]
 gi|333813695|gb|AEG06364.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti BL225C]
 gi|334097387|gb|AEG55398.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti AK83]
 gi|336035137|gb|AEH81069.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti SM11]
 gi|407320937|emb|CCM69541.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sinorhizobium meliloti Rm41]
 gi|429550340|gb|AGA05349.1| bifunctional ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti GR4]
          Length = 270

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    K + T+LD +   L+    +A++K        VE +AED
Sbjct: 86  VLDVAGGTGDIAFRIVERSGRKAHATVLDINGSMLSVGAERARKKGIEANLDFVEANAED 145

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF  +  D Y  A  I   P  +  ++EAYRVLK GG+  ++        L   F D W
Sbjct: 146 LPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRFYDAW 205


>gi|383763523|ref|YP_005442505.1| hypothetical protein CLDAP_25680 [Caldilinea aerophila DSM 14535 =
           NBRC 104270]
 gi|381383791|dbj|BAM00608.1| hypothetical protein CLDAP_25680 [Caldilinea aerophila DSM 14535 =
           NBRC 104270]
          Length = 271

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           +V+D G G G T L +     A +V  +D S   LA+ K   Q   L      + D E L
Sbjct: 63  IVLDAGCGAGHTALALAPF--AHHVIAVDLSEAMLAQGKILAQARGLANLTFAQEDVEAL 120

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P+P+   D  VS  S  +WP P++ +RE YRVL+ GG+  +
Sbjct: 121 PYPSATFDLAVSRYSAHHWPHPRQALRELYRVLRPGGRLLL 161


>gi|425459693|ref|ZP_18839179.1| putative methyltransferase [Microcystis aeruginosa PCC 9808]
 gi|389827837|emb|CCI20785.1| putative methyltransferase [Microcystis aeruginosa PCC 9808]
          Length = 262

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ ++EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVRR 264
             + W+R  R 
Sbjct: 203 TEECWFRHFRH 213


>gi|271500610|ref|YP_003333635.1| type 11 methyltransferase [Dickeya dadantii Ech586]
 gi|270344165|gb|ACZ76930.1| Methyltransferase type 11 [Dickeya dadantii Ech586]
          Length = 256

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 19/171 (11%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGD 165
           N +  V+D+G G G  +  I   V+  NV   D SP  L   A A Q++ L   +  +  
Sbjct: 44  NHHTCVLDLGCGAGHVSFTIASLVE--NVVACDLSPRMLDVVASAAQEKGLANIRTEQAV 101

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSR 222
           AE LPF     D  VS  S  +W D  + +RE  RVLK GG+A    +I P +P   L  
Sbjct: 102 AESLPFADGSFDVVVSRYSAHHWQDVGQALREVRRVLKPGGEAIFMDVISPGHPV--LDV 159

Query: 223 YFADVWMLFPKEE-------EYIEWFQKAGF--KDVQLKRIGPKWYRGVRR 264
           Y     ML            E++    +AG   + +Q  R+  ++   V R
Sbjct: 160 YLQTAEMLRDTSHVRDYTSGEWLTLLSEAGLTVRSLQTSRLHLEFQSWVTR 210


>gi|289768443|ref|ZP_06527821.1| hypothetical protein SSPG_01711 [Streptomyces lividans TK24]
 gi|145244283|gb|ABP49094.1| hypothetcal protein [Streptomyces lividans]
 gi|289698642|gb|EFD66071.1| hypothetical protein SSPG_01711 [Streptomyces lividans TK24]
          Length = 317

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGD 165
           +R  +V+D+G G G ++L I + +  + V  LD +P  LA+A+++    P    + VEGD
Sbjct: 90  DRLGVVLDIGCGRGTSSLVIAEQLRPRRVVGLDAAPSLLAQARERAKDLPDSTVEFVEGD 149

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
             DLP P   +D  V+A  + + P PQ  + +  RVL  GG A ++
Sbjct: 150 FHDLPLPDGSSDVVVAAFCLYHSPRPQDVVGQIARVLAPGGLAVLV 195


>gi|229579255|ref|YP_002837653.1| type 11 methyltransferase [Sulfolobus islandicus Y.G.57.14]
 gi|229581984|ref|YP_002840383.1| type 11 methyltransferase [Sulfolobus islandicus Y.N.15.51]
 gi|284997937|ref|YP_003419704.1| type 11 methyltransferase [Sulfolobus islandicus L.D.8.5]
 gi|228009969|gb|ACP45731.1| Methyltransferase type 11 [Sulfolobus islandicus Y.G.57.14]
 gi|228012700|gb|ACP48461.1| Methyltransferase type 11 [Sulfolobus islandicus Y.N.15.51]
 gi|284445832|gb|ADB87334.1| Methyltransferase type 11 [Sulfolobus islandicus L.D.8.5]
          Length = 232

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 7/145 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           LVVDVG GTG     I   ++ K    +D S   L   K+K P  +   V  DA +LP  
Sbjct: 84  LVVDVGTGTG----KIFDFLNCKTCIGIDVSLRFLTYMKRKRP--KVIAVRADANNLPLK 137

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           +  AD   S   +    +P   IRE YRVLK  GK  I         +++  +  W +  
Sbjct: 138 SGIADGISSTLVLHMLSNPSFAIREMYRVLKSNGKCSIAVLANVNSLIAKILSRWWKVNL 197

Query: 233 KE-EEYIEWFQKAGFKDVQLKRIGP 256
           +  + YI   Q+   K V+ K +GP
Sbjct: 198 RHYDYYINLLQENSLKVVERKELGP 222


>gi|147669863|ref|YP_001214681.1| methyltransferase type 11 [Dehalococcoides sp. BAV1]
 gi|146270811|gb|ABQ17803.1| Methyltransferase type 11 [Dehalococcoides sp. BAV1]
          Length = 206

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL--DQSPHQLA 148
           G +++ +R+ ALE AD+   N +  ++G GTG+ T G+++    KN  ++  DQS   L 
Sbjct: 20  GFFSDRIREAALEAADVK-PNSIAANIGAGTGYLTAGLLQ----KNCRVIAVDQSAAMLE 74

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
           K K K  ++    ++ D   LP      D   +   + +  DP   I E  R+L   G+ 
Sbjct: 75  KIKSKFGVRNVSCLQADGNALPLKNQSVDYSFANMFLHHAEDPAGVINEMSRILLPDGRL 134

Query: 209 CIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            I      T   + +   D W  F + ++   WF++AG ++++++ +  K
Sbjct: 135 VITDLCLHTHTNMQKEHHDRWPGF-ELKDVKGWFEQAGLQNIRVETLNQK 183


>gi|418400311|ref|ZP_12973853.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti CCNWSX0020]
 gi|48474592|sp|Q92SK7.2|UBIE_RHIME RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|359505780|gb|EHK78300.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Sinorhizobium meliloti CCNWSX0020]
          Length = 258

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    K + T+LD +   L+    +A++K        VE +AED
Sbjct: 74  VLDVAGGTGDIAFRIVERSGRKAHATVLDINGSMLSVGAERARKKGIEANLDFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF  +  D Y  A  I   P  +  ++EAYRVLK GG+  ++        L   F D W
Sbjct: 134 LPFAANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRFYDAW 193


>gi|379728844|ref|YP_005321040.1| type 11 methyltransferase [Saprospira grandis str. Lewin]
 gi|378574455|gb|AFC23456.1| methyltransferase type 11 [Saprospira grandis str. Lewin]
          Length = 224

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G G G   L +V++  AK +  LD S   +A+AK+  P  + ++  G  E LP+  
Sbjct: 48  VLDLGCGNG-RALSLVQNWGAKALAGLDVSDKMIAEAKKNVPTADLQV--GSIEALPWAD 104

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW----- 228
           D     +S  ++ Y  DP +G+ E  RVLK  G+  I+      F+     + VW     
Sbjct: 105 DSFSHVLSVEALYYLEDPHQGLAEIRRVLKAEGRLAIM----IEFFAENEASHVWAKNLP 160

Query: 229 --MLFPKEEEYIEWFQKAGFKDVQLKRI 254
             M+   E E++   +KAGF + +  RI
Sbjct: 161 TAMVIWSEAEWLAALKKAGFPNAKASRI 188


>gi|375148738|ref|YP_005011179.1| demethylmenaquinone methyltransferase [Niastella koreensis GR20-10]
 gi|361062784|gb|AEW01776.1| demethylmenaquinone methyltransferase [Niastella koreensis GR20-10]
          Length = 250

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPL---KECKIVEGDAEDL 169
           V+DV  GT    +   ++++ + +  +D S   L   +QK + L   K+ ++++GD+E +
Sbjct: 65  VLDVATGTADVAIMTARYLNPEKIIGIDISEGMLNLGRQKVDKLLLSKQIELLKGDSEAI 124

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----------GPVYPTF- 218
            FP    D    A  +  + + ++G+ E YRVLK GGKA I+            +Y  + 
Sbjct: 125 NFPNGTFDAITVAFGVRNFENLEKGLAEMYRVLKPGGKAVILEFSKPRRKGFKGLYNLYM 184

Query: 219 ---------WLSR------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                    W+S+      Y       FP+ E ++   Q+ GFK+  LKR+
Sbjct: 185 NIIAPRAGQWVSKNKDAYQYLNQSVKAFPEGETFLHILQQVGFKNTTLKRL 235


>gi|359793027|ref|ZP_09295813.1| methyltransferase type 11 [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359250853|gb|EHK54284.1| methyltransferase type 11 [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 270

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLK 157
           DD    ADL      V+DV  GTG  T    + V A  +VT LD +P  LA A+   P  
Sbjct: 33  DDLTAIADLQPGER-VLDVACGTGVVTRLAAERVGATGSVTGLDINPGMLAVARSATPPN 91

Query: 158 -ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII--GPV 214
              K  E +AE LPFP +  +  +    +++ P     +RE  RVL+ GG+A I   GP 
Sbjct: 92  ISIKWQEANAESLPFPDNAFNVVLCQMGLQFVPGKLAALREMRRVLETGGRALISVPGPK 151

Query: 215 YPTF-----WLSRY-------FADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR 260
            P F      L+R+       F D+       +E  E  + AGF++V ++   PK  R
Sbjct: 152 PPLFAIMTDALARHLSPEAASFGDLVFSMHDVDELKELMRSAGFRNVDVE-AKPKTLR 208


>gi|319942108|ref|ZP_08016426.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sutterella wadsworthensis 3_1_45B]
 gi|319804318|gb|EFW01202.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sutterella wadsworthensis 3_1_45B]
          Length = 254

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 42/198 (21%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLK-ECKIVEGDAE 167
           R M ++D+  GT    +      +A+N+T  D +   L+  +Q+ E L   C++++ DAE
Sbjct: 70  RGMKLLDIASGTCDLAIAFAHRTNAENITATDINYEMLSYGRQRLEQLGLNCQVIQADAE 129

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK---------ACIIGPVYPTF 218
            LPF  +  DR   +  I       R + E  RVLK GGK         A ++ P Y  +
Sbjct: 130 HLPFEDNAFDRVTVSFGIRNMTHKDRALAEMLRVLKPGGKLLVLEFSKCAPLLKPFYDFY 189

Query: 219 ------WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGV 262
                 WL           RY A+   + P +  +    +  GF  V       KW    
Sbjct: 190 SFHFMPWLGGKIAGDADSYRYLAESIRMHPDQPTFANLMRSVGFSRV-------KW---- 238

Query: 263 RRHGLIMG-CSV-TGVKP 278
             H L  G C++  G+KP
Sbjct: 239 --HNLTFGVCALHIGIKP 254


>gi|425454799|ref|ZP_18834525.1| putative methyltransferase [Microcystis aeruginosa PCC 9807]
 gi|389804439|emb|CCI16564.1| putative methyltransferase [Microcystis aeruginosa PCC 9807]
          Length = 262

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ ++EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVRR 264
             + W+R  R 
Sbjct: 203 TEECWFRHFRH 213


>gi|309776762|ref|ZP_07671736.1| methyltransferase, UbiE/COQ5 family [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915510|gb|EFP61276.1| methyltransferase, UbiE/COQ5 family [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 193

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DVG G G  T  +        +T +D S  +L  +           ++G+ E LPF +
Sbjct: 25  ILDVGFGNGSFTQAVSARFPCSKITAIDISIPKLFSSGN------ITFIKGNVEQLPFDS 78

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML--- 230
              D   S  S+ +W +  +GI E YRVLK  G+  I  P+    W+S     + M    
Sbjct: 79  QSFDLVFSVLSLHHWKEKNKGINEIYRVLKKNGRLIIGDPLLED-WMSNRILGLLMQVLD 137

Query: 231 ---FPKEEEYIEWFQKAGFKDVQLKRI 254
              F  ++   E+   AGF+D+ +  I
Sbjct: 138 GGSFTDKKRVSEYLSMAGFEDISISLI 164


>gi|347733254|ref|ZP_08866317.1| ubiE/COQ5 methyltransferase family protein [Desulfovibrio sp. A2]
 gi|347517974|gb|EGY25156.1| ubiE/COQ5 methyltransferase family protein [Desulfovibrio sp. A2]
          Length = 212

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 17/188 (9%)

Query: 79  FLSIVYDH--VINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH----- 131
           +   V D+   +  G ++E +R+ A   A L+       DVG GTGF T  +V       
Sbjct: 6   YFDAVADNWDTLRAGFFSEAVREAACARAPLAP-GQTAADVGAGTGFVTEALVARGVGVI 64

Query: 132 ---VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188
               +A  + +L + P   A   Q  P  +C++ EG+A  LP      D   +   + + 
Sbjct: 65  AMDANAAMLDVLRRKP--FAAGGQNLPPVDCRVCEGNA--LPLADGGVDHAFANMYLHHA 120

Query: 189 PDPQRGIREAYRVLKLGGKACIIG-PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK 247
            DP   +RE  R+++ GG+  +    ++   +L R   D W  F + ++   W  +AG +
Sbjct: 121 DDPGAALREMARIVRPGGRVVLTDLDLHDNAFLLREHHDRWPGF-RRDDVARWLGEAGLR 179

Query: 248 DVQLKRIG 255
           DV+++  G
Sbjct: 180 DVRVEDAG 187


>gi|297618327|ref|YP_003703486.1| type 11 methyltransferase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146164|gb|ADI02921.1| Methyltransferase type 11 [Syntrophothermus lipocalidus DSM 12680]
          Length = 269

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 14/152 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKA---KQKEPLKECKIVEGDAED 168
           +V+D+G G G   L   K+V  +  V  LD +   L  A   K++  +   + ++G  ED
Sbjct: 78  VVLDLGSGGGLDVLAASKYVGPSGTVYGLDMTDEMLDLANRNKEQMGVTNVEFLKGFIED 137

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPVYPTFWLSRYFAD 226
           +P P +  D  +S   I    D ++ + EAYRVLK  G+ CI  I  V P    +R  A 
Sbjct: 138 IPLPDESCDVVMSNCVINLSHDKEKALAEAYRVLKPQGRLCIADIVSVKPVPESARELAS 197

Query: 227 VWM------LFPKEEEYIEWFQKAGFKDVQLK 252
           +W+      L  KE E I    K GFKD++++
Sbjct: 198 LWVSCIAGALDVKEYENI--LGKVGFKDIEVQ 227


>gi|425471209|ref|ZP_18850069.1| putative methyltransferase [Microcystis aeruginosa PCC 9701]
 gi|389882998|emb|CCI36632.1| putative methyltransferase [Microcystis aeruginosa PCC 9701]
          Length = 262

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 22/192 (11%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ ++EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE------EYIEWFQKAGFKDVQLKR 253
           RVLK GG   +    + T   +    D W + P+        EY   +Q+AGFKDVQ   
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTV-PQANTVKDIAEYQNLYQQAGFKDVQFVE 201

Query: 254 IGPK-WYRGVRR 264
           +  + W+R  R 
Sbjct: 202 VTEECWFRHFRH 213


>gi|336425577|ref|ZP_08605598.1| hypothetical protein HMPREF0994_01604 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
 gi|336012152|gb|EGN42078.1| hypothetical protein HMPREF0994_01604 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
          Length = 212

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ----KEPLKECKIVEGDAED 168
           +V D G G G  T  ++K   A  VT LD S     K KQ    +  +  C +V+GD   
Sbjct: 51  MVADFGCGGGRNTAALLKRFPAATVTALDYSKVACDKTKQFNRHEVQIGRCNVVQGDVSR 110

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF     D   +  ++ +WP P    +E +RVLK GG   I+
Sbjct: 111 LPFEAATFDVITAFETVYFWPGPVESFQEVWRVLKPGGTFMIV 153


>gi|312116225|ref|YP_004013821.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221354|gb|ADP72722.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 243

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 43/227 (18%)

Query: 69  HKKEAFWFYRFLSIVYDHVINPGHWTEDM---------RDDA---LEPADLSNRNMLVVD 116
           HK +   F  F++ V+D V        D+         +D A   L P+  S    L++D
Sbjct: 6   HKIQNLGFQGFVNTVFDRVATRYDLMNDLMSGGVHRIWKDAAINWLAPSKSSAS--LLID 63

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLPFPT 173
           V GGTG  T   +K     + +I+    H +    + K  E     + V+ +AE LP+  
Sbjct: 64  VAGGTGDITKRFLKAAGRGSRSIITDINHSMMDEGRDKHPEFAGHVEFVQANAESLPYRD 123

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFWLS-- 221
           + +D Y  +  I    + Q  + EA+RVLK GG+  C         +   VY  +  +  
Sbjct: 124 NTSDFYTISFGIRNVDNKQNALNEAFRVLKPGGRFLCLEFSRVQVPLFDKVYEVYSDNVV 183

Query: 222 --------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                         RY  D    FP ++++    +KAGF  VQ + +
Sbjct: 184 PPLGRVVAGDAEPYRYLVDSIRAFPDQKKFAGMIEKAGFSRVQYRNL 230


>gi|288930622|ref|YP_003434682.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
 gi|288892870|gb|ADC64407.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
          Length = 246

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 21/153 (13%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGH------WTEDMRDDALEPADLSNRNMLVVDVGGG 120
           I+ +   +W YR      D+ ++PGH      W E +       A++    M ++DVG G
Sbjct: 4   IKEEIRRYWDYR----SRDYDLSPGHSGLPEVWKEVL-------AEIFEDKMRILDVGTG 52

Query: 121 TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPFPTDYADR 178
           TGF  L ++       V  +D S   L  A++K   K  +I    GDAE+LPF  +  D 
Sbjct: 53  TGF--LAVILAELGHEVVGIDISEEMLKVARRKAVDKGVRIDFRVGDAENLPFDDEEFDA 110

Query: 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
            V    +   P+P+R I E  RV+K GGK  II
Sbjct: 111 AVCRHVLWTLPNPERAISEWKRVVKKGGKVVII 143


>gi|427705559|ref|YP_007047936.1| type 11 methyltransferase [Nostoc sp. PCC 7107]
 gi|427358064|gb|AFY40786.1| Methyltransferase type 11 [Nostoc sp. PCC 7107]
          Length = 207

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+  G+G +T  +VK   ++NVT LD SP  L +AKQ  P  E   +E  AE++PF  
Sbjct: 49  VLDLCCGSGQSTQFLVK--SSQNVTGLDASPKSLQRAKQNVP--EASYIEAFAENMPFAN 104

Query: 174 DYAD-RYVSAGSIEYWPDPQRGI-REAYRVLKLGGKACII---GPVYPTFW 219
           +  D  + SA   E  P+  R I +E YR+LK GG   ++    P  P FW
Sbjct: 105 NSFDVVHTSAALHEMEPEQLRQILQEVYRILKPGGVFTLVDFHAPNNPIFW 155


>gi|225718990|gb|ACO15341.1| Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial
           precursor [Caligus clemensi]
          Length = 279

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 38/179 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN-------VTILDQSPHQLAKAKQKEPLK-----ECKI 161
           ++DV GGTG     I+ H+ A N       +T+ D +   L   + +         + + 
Sbjct: 86  ILDVAGGTGDIAFRILDHLKATNKDSNGGKITVCDINGSMLDVGRSRASAGGYLAPQIEF 145

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------II 211
           VEGDA+ L FP +  D Y  A  I      +  I EAYRVLK GG+  C         +I
Sbjct: 146 VEGDAQALQFPDNSFDAYTIAFGIRNVVRIEEAISEAYRVLKPGGRFMCLEFAPVDTPVI 205

Query: 212 GPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           G +Y  +  +                +Y  +    FP ++++ +  Q AGF+ V  K +
Sbjct: 206 GDLYNAYLFNVIPPLGEVVSGDWNSYQYLVESIQNFPPQDDFKQIIQDAGFRFVTYKNL 264


>gi|407705970|ref|YP_006829555.1| Resolvase [Bacillus thuringiensis MC28]
 gi|407383655|gb|AFU14156.1| Methyltransferase type 11 [Bacillus thuringiensis MC28]
          Length = 239

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++G GTG T   + K  D K VT ++++   + KAK +   E L   ++++GDAE LP
Sbjct: 41  VLEIGCGTGKTAAYMTKEFDYK-VTAIEKNEIMIQKAKDRWLFERLN-VQLIQGDAERLP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
              D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L
Sbjct: 99  CLND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKISQL 157

Query: 231 FP-----KEEEYIEWFQKAGFKDVQL 251
           +       E E+++ FQKA FK + +
Sbjct: 158 YGMKELLTENEWVQLFQKANFKRITI 183


>gi|391863984|gb|EIT73283.1| ubiquinone biosynthesis methyltransferase COQ5 [Aspergillus oryzae
           3.042]
          Length = 316

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + +   ++D+ GGTG     ++ H    N      VTI D +P  LA+ K++      
Sbjct: 110 DTTGKGWNILDIAGGTGDIAFRMLDHATNINHDHDTRVTIADINPDMLAEGKKRSIQTPY 169

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   ++G+A+D+P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 170 YNTDRLSFMQGNAQDMPNIPDNSVDLYTVVFGIRNFTDKQAALHEAFRVLKPGGVFACME 229

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 230 FSKVENSVFNAVYKQWSFSAIPMIGQLVAGDRDSYQYLVESIEQFPSQEEFRGMIQKAGF 289


>gi|193215584|ref|YP_001996783.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Chloroherpeton thalassium ATCC 35110]
 gi|193089061|gb|ACF14336.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Chloroherpeton thalassium ATCC 35110]
          Length = 242

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 10/138 (7%)

Query: 83  VYDHVINPG---HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
           + +HV++ G   +W    R  A   + L++    V+DV  GTG   L + K +   +VT 
Sbjct: 35  LLNHVLSMGTDFYWRWRARQKA--KSLLNHIEPKVLDVATGTGDLALEMTK-LRGASVTG 91

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPDPQRGIREA 198
           LD SP  L  AK+K P  + +  +G AE LPF  D     V+AG  +  + +  +G++E 
Sbjct: 92  LDLSPEMLVIAKKKCP--DLEFRQGKAESLPF-DDQTFNLVTAGFGVRNFENLSKGMQEF 148

Query: 199 YRVLKLGGKACIIGPVYP 216
           YRVLK GG A I+ P+ P
Sbjct: 149 YRVLKPGGAAIILEPMVP 166


>gi|319953772|ref|YP_004165039.1| demethylmenaquinone methyltransferase [Cellulophaga algicola DSM
           14237]
 gi|319422432|gb|ADV49541.1| demethylmenaquinone methyltransferase [Cellulophaga algicola DSM
           14237]
          Length = 242

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 14/145 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           ++D+  GTG   + ++    A  +  LD SP  LA    K  QK+  K  +++ GD+E+L
Sbjct: 61  ILDIATGTGDLAINLI-ETGASKIVGLDISPGMLAVGKKKVTQKQLDKTIEMIVGDSENL 119

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWL 220
           PF  +  D    A  +  + + + G+ E YRVLK GG   I+    PT         F+ 
Sbjct: 120 PFDENTFDAVTVAFGVRNFENLELGLSEIYRVLKKGGTLAILETSVPTKTPFKQGYKFYT 179

Query: 221 SRYFADVWMLFPKEEEYIEWFQKAG 245
            +    +  LF K+    E+  ++ 
Sbjct: 180 KQIMPKIGKLFSKDNSAYEYLSESA 204


>gi|332879529|ref|ZP_08447224.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|357047189|ref|ZP_09108796.1| methyltransferase domain protein [Paraprevotella clara YIT 11840]
 gi|332682495|gb|EGJ55397.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|355529790|gb|EHG99215.1| methyltransferase domain protein [Paraprevotella clara YIT 11840]
          Length = 215

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---KECKIVEGDAEDLP 170
           V+D+G G G     ++K      V  +D SP  +A A+QK      + C I++G A DLP
Sbjct: 51  VLDIGCGGGANIAHMLKRCPQGQVYGVDISPESVAFARQKNKAFLDERCFILQGTASDLP 110

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG---KACIIGPVYPTFWLSRYFADV 227
           F  D  D   +  ++ +W DP +   E  R+LK GG    AC     + T W  R     
Sbjct: 111 FKGDTFDVATAFETLYFWEDPDKAFCEILRILKPGGIFLIACEASNPHNTTWTDRIEG-- 168

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            M     EE     +  GF  V+  ++
Sbjct: 169 -MSVYTAEEIKHKLENCGFVHVRTDKM 194


>gi|169769200|ref|XP_001819070.1| ubiquinone biosynthesis methyltransferase coq5 [Aspergillus oryzae
           RIB40]
 gi|238501644|ref|XP_002382056.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Aspergillus flavus NRRL3357]
 gi|83766928|dbj|BAE57068.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220692293|gb|EED48640.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Aspergillus flavus NRRL3357]
          Length = 316

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + +   ++D+ GGTG     ++ H    N      VTI D +P  LA+ K++      
Sbjct: 110 DTTGKGWNILDIAGGTGDIAFRMLDHATNINYDHDTRVTIADINPDMLAEGKKRSIQTPY 169

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   ++G+A+D+P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 170 YNTDRLSFMQGNAQDMPNIPDNSVDLYTVVFGIRNFTDKQAALHEAFRVLKPGGVFACME 229

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 230 FSKVENSVFNAVYKQWSFSAIPMIGQLVAGDRDSYQYLVESIEQFPSQEEFRGMIQKAGF 289


>gi|218887335|ref|YP_002436656.1| methyltransferase type 11 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758289|gb|ACL09188.1| Methyltransferase type 11 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 212

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 15/177 (8%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH--------VDAKNVTI 139
           +  G ++E +RD A   A L+   M   DVG GTGF T  ++           +A  + +
Sbjct: 17  LRAGFFSEAVRDAACARAPLAPGQM-AADVGAGTGFVTEALLARGVAVMALDANAAMLDV 75

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           L + P   A      P   C++ EG+A  LP P    D   +   + +  DP   +RE  
Sbjct: 76  LRRKP--FAAGGPGLPPVVCRVCEGNA--LPLPDGAVDHAFANMYLHHAEDPGAALREMA 131

Query: 200 RVLKLGGKACIIG-PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
           R+++ GG+  +    ++   +L R   D W  F + ++   W  +AG  DV+++  G
Sbjct: 132 RIVRPGGRVVLTDLDLHDNAFLLREHHDRWPGF-RRDDVARWLGEAGLCDVRVEDAG 187


>gi|354604237|ref|ZP_09022228.1| hypothetical protein HMPREF9450_01143 [Alistipes indistinctus YIT
           12060]
 gi|353348004|gb|EHB92278.1| hypothetical protein HMPREF9450_01143 [Alistipes indistinctus YIT
           12060]
          Length = 269

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           VVD+G G G       + V      I +D +P+ L KA+   Q+      + +EGD E++
Sbjct: 80  VVDLGAGAGNDCFIAREEVGTTGRVIGVDFAPNMLLKARENAQRRGFTNVEFLEGDIENM 139

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P P   AD  VS   +   P   R  +E YRVLK G + CI   V    +  + F D   
Sbjct: 140 PLPDAMADVIVSNCVLNLLPRKDRIFKEIYRVLKPGARFCISDVVLDGLF-PQEFTDNAA 198

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKR 253
           ++        + E+Y+    +AG  D+ + R
Sbjct: 199 MYAGCIASAIQREDYLREIARAGLVDIAVVR 229


>gi|223043223|ref|ZP_03613270.1| menaquinone biosynthesis methyltransferase UbiE [Staphylococcus
           capitis SK14]
 gi|417907751|ref|ZP_12551518.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus capitis VCU116]
 gi|222443434|gb|EEE49532.1| menaquinone biosynthesis methyltransferase UbiE [Staphylococcus
           capitis SK14]
 gi|341594838|gb|EGS37516.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus capitis VCU116]
          Length = 241

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + K V  K +VT LD S + L   K+K   L   K+V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSKAVGNKGHVTGLDFSENMLEVGKEKTSSLNNVKLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNTFD-YVTVGFGLRNVPDYLVALQEMHRVLKPGGMVVCLETSQPTLPLFKQVYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK--DVQ-LKRI 254
           V      +F K +E  EW Q++ F   D Q LKR+
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFNFPDKQTLKRL 207


>gi|409435766|ref|ZP_11262974.1| bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and
           S-adenosylmethionine:2-DMK methyltransferase [Rhizobium
           mesoamericanum STM3625]
 gi|408752524|emb|CCM74121.1| bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and
           S-adenosylmethionine:2-DMK methyltransferase [Rhizobium
           mesoamericanum STM3625]
          Length = 258

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 31/169 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     I++  + + + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIIEASNRQAHATVLDINGSMLAVGAERAAKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG------PVYPTFWLS- 221
           LPF  +  D Y  A  I   P     + EAYRVLK GG+  ++       P+    + S 
Sbjct: 134 LPFEPNSFDAYTIAFGIRNVPRIDVALSEAYRVLKRGGRLLVLEFSEVDMPLLDRIYDSW 193

Query: 222 -------------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
                              +Y  +    FP +E + E  +KAGF  V  
Sbjct: 194 SFNAIPKFGRAITGESEPYQYLVESIRKFPNQENFAEMIRKAGFSRVSF 242


>gi|325264122|ref|ZP_08130854.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
 gi|324030606|gb|EGB91889.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
          Length = 195

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ----KEPLKECKIVEGDAED 168
           +V D G G G  T  ++K   A  VT LD S     K KQ    +  +  C +V+GD   
Sbjct: 34  MVADFGCGGGRNTAALLKRFPAATVTALDYSKVACDKTKQFNRHEVQIGRCNVVQGDVSR 93

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF     D   +  ++ +WP P    +E +RVLK GG   I+
Sbjct: 94  LPFEAATFDVITAFETVYFWPGPVESFQEVWRVLKPGGTFMIV 136


>gi|424843157|ref|ZP_18267782.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Saprospira grandis DSM 2844]
 gi|395321355|gb|EJF54276.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Saprospira grandis DSM 2844]
          Length = 224

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 14/148 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G G G   L +V+H  AK +  LD S   +A+AK+  P  + ++  G  E LP+  
Sbjct: 48  VLDLGCGNG-RALSLVQHWGAKALAGLDVSDKMIAEAKKNVPTADLQV--GSIEALPWAD 104

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW----- 228
           +     +S  ++ Y  DP +G+ E  RVLK  G+  I+      F+     + VW     
Sbjct: 105 NCFSHVLSVEALYYLEDPHQGLAEIRRVLKAEGRLAIM----IEFFAENEASHVWAKNLP 160

Query: 229 --MLFPKEEEYIEWFQKAGFKDVQLKRI 254
             M+   E E++   +K GF + +  RI
Sbjct: 161 TAMVIWSEAEWLAALKKVGFPNAKASRI 188


>gi|298346112|ref|YP_003718799.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mobiluncus
           curtisii ATCC 43063]
 gi|298236173|gb|ADI67305.1| ubiquinone/menaquinone biosynthesis methyltransferase [Mobiluncus
           curtisii ATCC 43063]
          Length = 230

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 30/167 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DV  GTG +++  V+      V  +D S   +A+ +++ P  E    +GDA +L FP 
Sbjct: 54  VLDVAAGTGASSIEFVR--AGAKVVAVDFSEGMIAEGRRRHP--EIDFQQGDAMNLDFPD 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWLSR-- 222
           +  D    +  +    DP R +RE YRV++ GG   +     PT         F+L R  
Sbjct: 110 NTFDCVTISFGLRNVSDPDRALREFYRVVRPGGHVVVCEFSRPTFAPFRAVYRFFLHRVM 169

Query: 223 ---------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          Y A+  + +P + ++    + AGF+ +QLK +
Sbjct: 170 PPIARLFSTDAVAYDYLAESILAWPSQYQFAAHLRAAGFERLQLKNL 216


>gi|11497757|ref|NP_068979.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Archaeoglobus fulgidus DSM 4304]
 gi|2650497|gb|AAB91083.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Archaeoglobus fulgidus DSM 4304]
          Length = 261

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 19/149 (12%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKECKIVEGDAEDLP 170
           LV+++G GTG      + H  + NV  LD S   L +A  + KE  K+   +  DAE+LP
Sbjct: 63  LVLEIGAGTGKN----IPHYPS-NVVALDISEKMLERAVRRAKESGKKVDFLLADAENLP 117

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F ++  D   +        DP RG+REA+RVLK GG+A  +  + P    SR+   ++ L
Sbjct: 118 FRSNSFDVVFTTFVFCSVDDPVRGLREAFRVLKKGGRAYFLEHMLPK---SRFLHPLFNL 174

Query: 231 F--------PK-EEEYIEWFQKAGFKDVQ 250
                    P+      E  Q+AGF+ V+
Sbjct: 175 LNPIFRAFGPEINRRTDENIQRAGFQIVK 203


>gi|391233171|ref|ZP_10269377.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Opitutaceae bacterium TAV1]
 gi|391222832|gb|EIQ01253.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Opitutaceae bacterium TAV1]
          Length = 313

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDLP 170
           + D+G G G  +  + +   A+ V  +D SP  +    +   K          GD E +P
Sbjct: 150 IADLGAGEGLISQLLARR--ARQVWCIDNSPRMVEVGTELAAKNGFANLTYKLGDIEQVP 207

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADVWM 229
            P    D  + + ++ +   PQR + EA R+LK GG+  ++     TF  +R  +ADVW+
Sbjct: 208 LPDASVDLAILSQALHHARHPQRAVSEAARILKPGGQLLLLDLKEHTFEKARELYADVWL 267

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASG 281
            F +E     + +KAGF+ + +  +  +      +         +G KPA G
Sbjct: 268 GF-RETTLHGFLEKAGFRQIDITTVARE-----PQEPFFQTLLASGSKPAKG 313


>gi|225575447|ref|ZP_03784057.1| hypothetical protein RUMHYD_03537 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037392|gb|EEG47638.1| methyltransferase domain protein [Blautia hydrogenotrophica DSM
           10507]
          Length = 125

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)

Query: 147 LAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           + K  +++ +   K+  GDAE LPF     D  +   S  ++P+PQR I E YRVL+  G
Sbjct: 1   MLKQAEEKRMANVKLYLGDAEHLPFENAEFDVLICTDSFHHYPEPQRAIEEFYRVLQKDG 60

Query: 207 KACIIGPVYPTFWLSRYFADVWMLFPKE--------EEYIEWFQKAGFKDVQLKRIGPKW 258
              +   V P  +  R   ++++ F  E         E I + ++ GF+D+Q ++I    
Sbjct: 61  YLLLADFVKP--FPVRQLMNIFLPFSSEGDVKIYSRREIISFLRQNGFRDIQYQKINKSS 118

Query: 259 YRGV 262
           Y  V
Sbjct: 119 YLTV 122


>gi|171910773|ref|ZP_02926243.1| transcriptional regulator, ArsR family protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 313

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAED 168
           +++ D+G G G  +  + +H  A+ V  +D S   +A      Q+          GD ED
Sbjct: 151 LVIADLGAGEGVVSQMLAQH--ARQVIAVDNSEKMVAYGSSLAQEHGFANLDYRLGDIED 208

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADV 227
            P      D  + + ++ +   P+  +  A+R+LK GG+  ++  +  +F  +R  +ADV
Sbjct: 209 PPITDGSVDVALFSQALHHAGRPELALAAAHRILKPGGRVIVLDLLRHSFEKARLLYADV 268

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           W+ F  E E  E  ++AGF++++++ +
Sbjct: 269 WLGF-SEVELHEMLERAGFQNIEIRLV 294


>gi|306842360|ref|ZP_07475017.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           BO2]
 gi|306287499|gb|EFM58964.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           BO2]
          Length = 269

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYP--T 217
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  VY   +
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS 205

Query: 218 FWL--------------SRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           FW                 Y  +    FPK++++    +KAGF+ V  +  
Sbjct: 206 FWAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYRNF 256


>gi|195996925|ref|XP_002108331.1| hypothetical protein TRIADDRAFT_20328 [Trichoplax adhaerens]
 gi|190589107|gb|EDV29129.1| hypothetical protein TRIADDRAFT_20328 [Trichoplax adhaerens]
          Length = 296

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 38/179 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVD----------AKNVTILDQSPHQLAKAKQKEPLKECKI-- 161
           +VDVGGGTG     +   +D          A +V  ++QS   + K + KE   +  I  
Sbjct: 105 IVDVGGGTGKVNQRVKNSMDKNTQENIPNCAISVIDINQSMLDVGKTRGKELGYQGDIKW 164

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---------- 211
           ++GDAE+LP     AD   +A +I    + ++ I EAYR+L  GG+  ++          
Sbjct: 165 IKGDAENLPVKDSSADLVTAAFAIRNVTNIRKAISEAYRILTPGGRFSVLEFSHVTNPYL 224

Query: 212 ---------------GPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          G +    W S +Y  +    FP + E+ + F++AGF+ V+ + +
Sbjct: 225 KSLYDTYSFEMIPVMGEIIAEDWKSYQYLVESIRQFPTQSEFADMFKQAGFRFVRFQNL 283


>gi|400533405|ref|ZP_10796944.1| methyltransferase type 11 [Mycobacterium colombiense CECT 3035]
 gi|400333749|gb|EJO91243.1| methyltransferase type 11 [Mycobacterium colombiense CECT 3035]
          Length = 248

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 15/157 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           + +DVG G G  T  + +      + + +D S   LA+A + E   +   ++ DA+ LP 
Sbjct: 94  VALDVGSGPGNVTASLARAAGPDGLGLGVDISEPMLARAVRNEAGPQVGFIKADAQRLPL 153

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
                D  VS   ++  PDP   + E  RVL+ GGK  ++ P      L+RY    W L 
Sbjct: 154 RDKTIDVAVSTAVLQLVPDPAAALAEIARVLRPGGKLAVMVPT--AGRLARY----WRLL 207

Query: 232 PK-------EEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
           P        ++E  +  +  GF  V++K +G  +W R
Sbjct: 208 PNVGAHAFDDDEIGDVLEDNGFASVRVKNLGTFQWVR 244


>gi|229162413|ref|ZP_04290376.1| Methyltransferase type 11 [Bacillus cereus R309803]
 gi|228621097|gb|EEK77960.1| Methyltransferase type 11 [Bacillus cereus R309803]
          Length = 239

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 9/145 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPF 171
           V+++G GTG T   + K    K VT ++++   + KAK +   +    ++++GDAE LP 
Sbjct: 41  VLEIGCGTGKTAAYMTKRFGYK-VTAVEKNEIMIQKAKDRWMFEGLNIQLIQGDAEQLPC 99

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T    +    +  L+
Sbjct: 100 LND-SFEFVLGESILAFTDKERVISECYRVLQKSGKLVVIEMIIDTHIEKKEEEKITQLY 158

Query: 232 PKEE-----EYIEWFQKAGFKDVQL 251
             +E     E+++ FQKA FK V +
Sbjct: 159 GMKELLTEREWVQLFQKANFKRVNI 183


>gi|240103283|ref|YP_002959592.1| Methyltransferase, ubiE/COQ5 family [Thermococcus gammatolerans
           EJ3]
 gi|239910837|gb|ACS33728.1| Methyltransferase, ubiE/COQ5 family [Thermococcus gammatolerans
           EJ3]
          Length = 234

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 78  RFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           R +S+  D +     W     ++ L+  ++  R + ++DV  GTG   L + + ++ +N+
Sbjct: 23  RLISLGLDKL-----WRRKACEEVLKFIEVQERPLKILDVACGTGDMILCMRRSLEKRNL 77

Query: 138 TI----LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQR 193
           +     LD S   L  A++K P    K+  G AE++P+P +  D    A  I  + D +R
Sbjct: 78  SGEFYGLDCSEEMLRIARRKVPF--AKLSVGTAEEMPYPDEGFDVVSIAFGIRNFSDRER 135

Query: 194 GIREAYRVLKLGGKACII 211
            I+E +RVLK GGK  I+
Sbjct: 136 AIKELHRVLKPGGKLLIL 153


>gi|55379105|ref|YP_136955.1| 24-sterol C-methyltransferase [Haloarcula marismortui ATCC 43049]
 gi|55231830|gb|AAV47249.1| 24-sterol C-methyltransferase [Haloarcula marismortui ATCC 43049]
          Length = 259

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 9/148 (6%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 68  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDDGIGF 121

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y     S
Sbjct: 122 LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEIARVLRPGGTANIAVNYYEENVHS 181

Query: 222 ---RYFADVWMLFPKEEEYIEWFQKAGF 246
              + F D+ M     +EY E F++AG 
Sbjct: 182 HEWQEFIDIEMTRWSADEYREAFREAGL 209


>gi|116622279|ref|YP_824435.1| type 11 methyltransferase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225441|gb|ABJ84150.1| Methyltransferase type 11 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 215

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 10/149 (6%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA----KQKEPLKECKIVEGDAED 168
           +++DVG G G T   +        V  +D S   +A A    KQ   L   +I E     
Sbjct: 48  IILDVGCGGGRTVSKLAAIATQGKVCGIDHSTESVAMAVRTNKQWIDLARVEIREASVSR 107

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY------PTFWLSR 222
           LPFP    D   +  +  +WP     +RE  RVLK GG+  II  VY       +    +
Sbjct: 108 LPFPDGVFDVATAVETHFWWPALATDMREVLRVLKPGGRLIIIAEVYKGAESFTSKAAEK 167

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           Y     M     EE+ E F  AG+ DVQ+
Sbjct: 168 YSQKTGMALLSIEEHRELFTDAGYSDVQV 196


>gi|418411888|ref|ZP_12985154.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           epidermidis BVS058A4]
 gi|410891471|gb|EKS39268.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           epidermidis BVS058A4]
          Length = 241

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L+  ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLENIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|293366562|ref|ZP_06613239.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319331|gb|EFE59700.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 243

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L+  ++V GDA +LPF 
Sbjct: 56  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLENIQLVHGDAMNLPFD 115

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 116 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 174

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 175 VMPIFGKMFAKSKEEYEWLQQSTFN 199


>gi|302392775|ref|YP_003828595.1| methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
 gi|302204852|gb|ADL13530.1| Methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
          Length = 266

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 29/216 (13%)

Query: 91  GHWTEDMRDDALE---------PADLSNRN--MLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
           G+ +ED+  D +E         P  ++N      V+D+G G GF      + V  +   I
Sbjct: 51  GYTSEDLETDFIEANQGLGCGNPQAITNLQPGQTVLDLGCGAGFDVFLAAREVGIEGKVI 110

Query: 140 -LDQSPHQLAKAKQKEPLKECKIVE---GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGI 195
            +D +   + KA++       + VE   G+ E LP   +  D  +S   I    D +   
Sbjct: 111 GVDMTSEMITKARKTAEENNFENVEFRLGEIEALPAADNSVDVVISNCVINLSVDKEAVF 170

Query: 196 REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK-------EEEYIEWFQKAGFKD 248
           +E YRVLK GG+   I  V     LS    D    + +        EE  E  +K GF+D
Sbjct: 171 QEIYRVLKSGGRIA-ISDVVKNNELSEEIKDNLENYSRCITGAIPAEELEEIMEKNGFED 229

Query: 249 VQLKR------IGPKWYRGVRRHGLIMGCSVTGVKP 278
           V++KR      I   W   ++    I    +TG KP
Sbjct: 230 VEIKRKENSEEIVQDWSTEIQPEDFIYSAYITGKKP 265


>gi|399042127|ref|ZP_10736982.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF122]
 gi|398059509|gb|EJL51361.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF122]
          Length = 258

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 31/169 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  + + + T+LD +   LA    +A +K+       VE +AED
Sbjct: 74  VLDVAGGTGDIAFRIVEASNRQAHATVLDINGSMLAVGAERAAKKKLSDNLTFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     + EAYRVLK GG+  +          +  VY ++
Sbjct: 134 LPFDPNSFDAYTIAFGIRNVPRIDVALSEAYRVLKRGGRLLVLEFSEVDMPFLDRVYDSW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
             +                +Y  +    FP +E + +  + AGF  V  
Sbjct: 194 SFNAIPKFGKAITGEAEPYQYLVESIRKFPNQENFADMIRNAGFSRVNF 242


>gi|227830443|ref|YP_002832223.1| type 11 methyltransferase [Sulfolobus islandicus L.S.2.15]
 gi|227456891|gb|ACP35578.1| Methyltransferase type 11 [Sulfolobus islandicus L.S.2.15]
          Length = 232

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 7/145 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           LVVD+G GTG     I   ++ K    +D S   L   K+K P  +   V  DA +LP  
Sbjct: 84  LVVDMGTGTG----KIFDFLNCKTCIGIDVSLRFLTYMKRKRP--KVIAVRADANNLPLK 137

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP 232
           +  AD   S   +    +P   IRE YRVLK  GK  I         +++  +  W +  
Sbjct: 138 SGIADGISSTLVLHMLSNPSFAIREMYRVLKSNGKCSIAVLANVNSLIAKILSRWWKVNL 197

Query: 233 KE-EEYIEWFQKAGFKDVQLKRIGP 256
           +  + YI   Q+   K V+ K +GP
Sbjct: 198 RHYDYYINLLQENSLKVVERKELGP 222


>gi|305664504|ref|YP_003860791.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter
           sp. HTCC2170]
 gi|88708521|gb|EAR00757.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter
           sp. HTCC2170]
          Length = 242

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 31/166 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           ++D+  GTG   + +VK   A N+  LD SP  L     K  QK   +  ++VEGD+E+L
Sbjct: 61  ILDIATGTGDLAINLVK-TGATNIVGLDISPGMLEVGKKKVAQKNLGQTIEMVEGDSENL 119

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWL 220
           PFP +  D    A  +  +   ++G+ E  RVLK  G   ++    PT         F+ 
Sbjct: 120 PFPDNSFDAVTVAFGVRNFETLEKGLSEIRRVLKPSGTFVVLETSVPTKTPFKQGYHFYT 179

Query: 221 SR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDV 249
                              Y ++   +FP  E++    +K GF DV
Sbjct: 180 KNVLPRIGKIFSKDNSAYAYLSESASVFPHGEKFNNILRKIGFIDV 225


>gi|431806535|ref|YP_007233436.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Liberibacter crescens BT-1]
 gi|430800510|gb|AGA65181.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Liberibacter crescens BT-1]
          Length = 258

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 33/180 (18%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVT-ILDQSPHQLA----KAKQKEP 155
           AL P   +N ++L  DV GGTG     I++  + +  T ++D +   L+    +A++K  
Sbjct: 63  ALNPPKSANYHVL--DVAGGTGDIAFRIMEASEKEAQTFVVDINDSMLSLGKKRARKKGF 120

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
                 +E +AE LPF ++  D Y  A  I   P+    ++EAYRVLK GG+  ++    
Sbjct: 121 FNNIHFIEANAEVLPFKSNSFDAYTIAFGIRNMPNINLVLQEAYRVLKYGGRLLVLEFSE 180

Query: 216 PTFWLSRYFADVWML--------------------------FPKEEEYIEWFQKAGFKDV 249
               +     D+W                            FPK+E++ E   KA F DV
Sbjct: 181 VDVPILDRLYDLWSFKAIPRLGKLVAGDDQPYQYLVESIRNFPKQEDFAEMISKAKFSDV 240


>gi|27468076|ref|NP_764713.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis ATCC 12228]
 gi|57866984|ref|YP_188616.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis RP62A]
 gi|282876097|ref|ZP_06284964.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis SK135]
 gi|417647103|ref|ZP_12296952.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU144]
 gi|417655961|ref|ZP_12305652.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU028]
 gi|417659746|ref|ZP_12309346.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU045]
 gi|417908557|ref|ZP_12552314.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU037]
 gi|417912196|ref|ZP_12555891.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU105]
 gi|417913734|ref|ZP_12557397.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU109]
 gi|418325563|ref|ZP_12936769.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU071]
 gi|418605760|ref|ZP_13169067.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU041]
 gi|418606607|ref|ZP_13169877.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU057]
 gi|418609631|ref|ZP_13172767.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU065]
 gi|418613290|ref|ZP_13176304.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU117]
 gi|418616380|ref|ZP_13179305.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU120]
 gi|418621774|ref|ZP_13184539.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU123]
 gi|418625092|ref|ZP_13187750.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU125]
 gi|418627786|ref|ZP_13190356.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU126]
 gi|418629234|ref|ZP_13191748.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU127]
 gi|418664583|ref|ZP_13226051.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU081]
 gi|419769472|ref|ZP_14295566.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-250]
 gi|419771714|ref|ZP_14297760.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-K]
 gi|420163151|ref|ZP_14669898.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM095]
 gi|420165474|ref|ZP_14672165.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM088]
 gi|420167873|ref|ZP_14674525.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM087]
 gi|420170190|ref|ZP_14676751.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM070]
 gi|420172529|ref|ZP_14679028.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM067]
 gi|420183140|ref|ZP_14689273.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM049]
 gi|420187320|ref|ZP_14693341.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM039]
 gi|420194775|ref|ZP_14700572.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM021]
 gi|420197357|ref|ZP_14703081.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM020]
 gi|420201606|ref|ZP_14707216.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM018]
 gi|420206205|ref|ZP_14711715.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM008]
 gi|420208982|ref|ZP_14714420.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM003]
 gi|420211141|ref|ZP_14716515.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM001]
 gi|420213937|ref|ZP_14719217.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05005]
 gi|420215934|ref|ZP_14721159.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05001]
 gi|420220827|ref|ZP_14725784.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH04008]
 gi|420221739|ref|ZP_14726665.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH08001]
 gi|420225673|ref|ZP_14730500.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH06004]
 gi|420227261|ref|ZP_14732033.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05003]
 gi|420229580|ref|ZP_14734286.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH04003]
 gi|420231995|ref|ZP_14736637.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH051668]
 gi|420234639|ref|ZP_14739199.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH051475]
 gi|421607030|ref|ZP_16048280.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis AU12-03]
 gi|48474442|sp|Q8CSH9.1|UBIE_STAES RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|81674537|sp|Q5HP74.1|UBIE_STAEQ RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|27315621|gb|AAO04755.1|AE016747_252 menaquinone biosynthesis methyltransferase [Staphylococcus
           epidermidis ATCC 12228]
 gi|57637642|gb|AAW54430.1| methlytransferase, UbiE/COQ5 family [Staphylococcus epidermidis
           RP62A]
 gi|281295122|gb|EFA87649.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis SK135]
 gi|329725452|gb|EGG61935.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU144]
 gi|329735383|gb|EGG71675.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU045]
 gi|329737211|gb|EGG73465.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU028]
 gi|341651207|gb|EGS75012.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU105]
 gi|341654756|gb|EGS78494.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU109]
 gi|341655918|gb|EGS79641.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU037]
 gi|365228165|gb|EHM69350.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU071]
 gi|374401463|gb|EHQ72536.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU041]
 gi|374406570|gb|EHQ77462.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU065]
 gi|374407383|gb|EHQ78245.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU057]
 gi|374410393|gb|EHQ81151.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU081]
 gi|374816225|gb|EHR80432.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU117]
 gi|374821206|gb|EHR85273.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU120]
 gi|374825980|gb|EHR89896.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU125]
 gi|374828202|gb|EHR92041.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU123]
 gi|374828933|gb|EHR92756.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU126]
 gi|374834665|gb|EHR98304.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU127]
 gi|383358091|gb|EID35552.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-250]
 gi|383360533|gb|EID37928.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-K]
 gi|394234840|gb|EJD80414.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM095]
 gi|394235275|gb|EJD80847.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM088]
 gi|394237901|gb|EJD83387.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM087]
 gi|394240528|gb|EJD85951.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM070]
 gi|394241690|gb|EJD87099.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM067]
 gi|394249603|gb|EJD94816.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM049]
 gi|394256299|gb|EJE01232.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM039]
 gi|394263835|gb|EJE08556.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM021]
 gi|394266164|gb|EJE10810.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM020]
 gi|394271874|gb|EJE16353.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM018]
 gi|394278044|gb|EJE22361.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM008]
 gi|394279210|gb|EJE23518.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM003]
 gi|394281594|gb|EJE25820.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM001]
 gi|394283859|gb|EJE28020.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05005]
 gi|394285715|gb|EJE29788.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH04008]
 gi|394290150|gb|EJE34017.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH08001]
 gi|394292930|gb|EJE36663.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05001]
 gi|394293107|gb|EJE36830.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH06004]
 gi|394297351|gb|EJE40952.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH05003]
 gi|394299346|gb|EJE42897.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH04003]
 gi|394301717|gb|EJE45171.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH051668]
 gi|394303882|gb|EJE47292.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIH051475]
 gi|406657323|gb|EKC83712.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis AU12-03]
          Length = 241

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L+  ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLENIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|302389182|ref|YP_003825003.1| arsenite methyltransferase [Thermosediminibacter oceani DSM 16646]
 gi|302199810|gb|ADL07380.1| Arsenite methyltransferase [Thermosediminibacter oceani DSM 16646]
          Length = 272

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 20/153 (13%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDL 169
           V+D+G G G   L   K+V D   V  LD +   LA   K K+K  +   + ++G  ED+
Sbjct: 79  VLDLGSGGGIDVLIASKYVGDTGKVYGLDMTDEMLALANKNKEKMGVTNVEFIKGYIEDI 138

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-----------YPTF 218
           P   +  D  +S   I    D ++ ++EAYRVLK GG+  I   V               
Sbjct: 139 PLGDETVDVIISNCVINLCEDKEKALKEAYRVLKKGGRLAIADIVALKDVPEDIKKQVEL 198

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           W       +     K EEY E  QK GFK++++
Sbjct: 199 WAGCIAGTI-----KIEEYREILQKVGFKNIEI 226


>gi|91205063|ref|YP_537418.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           bellii RML369-C]
 gi|122425987|sp|Q1RJY5.1|UBIE_RICBR RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|91068607|gb|ABE04329.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Rickettsia bellii RML369-C]
          Length = 248

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K    +    ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSNILDVASGSGDIALKLAKKAKDRGSNISLTLSDINEEMLRQAKKKSIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG----------KACI 210
                AE+LPFP +  D Y  A  I   PD  + ++EAYRVLK  G          K  +
Sbjct: 116 FTVASAEELPFPDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESL 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++E+    ++AGF+++  K +
Sbjct: 176 LQDFYKFYSFNVIPKIGQIITGNKEAYDYLVESIDLFPSQDEFRIMIKEAGFEEINYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|163867344|ref|YP_001608538.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           tribocorum CIP 105476]
 gi|189037014|sp|A9ILA7.1|UBIE_BART1 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|161016985|emb|CAK00543.1| ubiquinone/menaquinone biosynthesis [Bartonella tribocorum CIP
           105476]
          Length = 260

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 37/175 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE------PLKECKIVEGDA 166
           V+DV GGTG     I+K    K + T+LD +   L+  KQ+       PL     VE +A
Sbjct: 76  VLDVAGGTGDIAFRILKASRQKAHATVLDINGSMLSVGKQRAQKNGLAPL--IDFVEANA 133

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVYPTFWLSRYFA 225
           E LPF     D Y  A  I   P   + +REA+RVLK GG+  C+        WL + + 
Sbjct: 134 EHLPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNVEMPWLDKIY- 192

Query: 226 DVWML--------------------------FPKEEEYIEWFQKAGFKDVQLKRI 254
           D+W                            FPK+ ++    ++AGF  V  + +
Sbjct: 193 DLWSFHAIPKLGQFIANDGDAYRYLVESIRKFPKQNDFAHMIKQAGFSRVSYRNL 247


>gi|313895880|ref|ZP_07829434.1| methyltransferase domain protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|402302572|ref|ZP_10821683.1| methionine biosynthesis protein MetW-like protein [Selenomonas sp.
           FOBRC9]
 gi|312975305|gb|EFR40766.1| methyltransferase domain protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|400380390|gb|EJP33209.1| methionine biosynthesis protein MetW-like protein [Selenomonas sp.
           FOBRC9]
          Length = 216

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 8/148 (5%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDA 166
           N  V+DVG G G T   + + V A ++  +D S   +  ++            +I+ G  
Sbjct: 53  NDTVLDVGCGGGNTLARMAERVTAGHLVGIDYSETSVEASRAFNSALVASGRMEILSGSV 112

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---RY 223
           E LPFP  + D+ V+  S  +WP+P   ++E  RV+K GG   ++  +Y    L    R 
Sbjct: 113 ESLPFPDAHFDKVVTVESFYFWPNPAESLKEVARVVKPGGMFLLLAEIYERPDLPAGIRE 172

Query: 224 FADVWMLF-PKEEEYIEWFQKAGFKDVQ 250
             + + L  P   E+   F+ AGF +V+
Sbjct: 173 KVEAYELTNPTPAEFERLFRAAGFPEVE 200


>gi|448638084|ref|ZP_21676135.1| 24-sterol C-methyltransferase [Haloarcula sinaiiensis ATCC 33800]
 gi|448655094|ref|ZP_21681946.1| 24-sterol C-methyltransferase [Haloarcula californiae ATCC 33799]
 gi|445763970|gb|EMA15144.1| 24-sterol C-methyltransferase [Haloarcula sinaiiensis ATCC 33800]
 gi|445765543|gb|EMA16681.1| 24-sterol C-methyltransferase [Haloarcula californiae ATCC 33799]
          Length = 227

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 9/148 (6%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDDGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y     S
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEIARVLRPGGTANIAVNYYEENVHS 149

Query: 222 ---RYFADVWMLFPKEEEYIEWFQKAGF 246
              + F D+ M     +EY E F++AG 
Sbjct: 150 HEWQEFIDIEMTRWSADEYREAFREAGL 177


>gi|157827635|ref|YP_001496699.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           bellii OSU 85-389]
 gi|166234741|sp|A8GXR2.1|UBIE_RICB8 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|157802939|gb|ABV79662.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Rickettsia bellii OSU 85-389]
          Length = 248

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K    +    ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSNILDVASGSGDIALKLAKKAKDRGSNISLTLSDINEEMLRQAKKKSIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG----------KACI 210
                AE+LPFP +  D Y  A  I   PD  + ++EAYRVLK  G          K  +
Sbjct: 116 FTVASAEELPFPDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESL 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++E+    ++AGF+++  K +
Sbjct: 176 LQDFYKFYSFNVIPKIGKIITGNKEAYDYLVESIDLFPSQDEFRIMIKEAGFEEINYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|153939231|ref|YP_001390112.1| UbiE/COQ5 family methlytransferase [Clostridium botulinum F str.
           Langeland]
 gi|152935127|gb|ABS40625.1| methyltransferase, UbiE/COQ5 family, selenocysteine-containing
           [Clostridium botulinum F str. Langeland]
          Length = 268

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 18/181 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 89  VIDLGSGGGFDCFLASKKVGVKGYIIGVDMTPEMISKSRIMSRKYRYRNVDFRLGEIENL 148

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   +  D  +S   I   P+ QR   EAYRVLK GG+   I  +     L++       
Sbjct: 149 PVADNTGDVIISNCVINLSPNKQRVYNEAYRVLKKGGRVA-ISDIVLIRELTKEMKQDEK 207

Query: 230 LF-------PKEEEYIEWFQKAGFKDVQL------KRIGPKWYRGVRRHGLIMGCSVTGV 276
           L+          EE   + + AGF D+++      K    KW   ++    IM  S+  +
Sbjct: 208 LYCGUVTGASSVEELKLYLENAGFSDIRIDTQEVSKEYAEKWGHNLKVGEYIMSASIKAI 267

Query: 277 K 277
           K
Sbjct: 268 K 268


>gi|428306464|ref|YP_007143289.1| type 11 methyltransferase [Crinalium epipsammum PCC 9333]
 gi|428247999|gb|AFZ13779.1| Methyltransferase type 11 [Crinalium epipsammum PCC 9333]
          Length = 217

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 6/109 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+  G+G  T  +V++ D  NVT LD SP  L +A+   P  + K VE  AE++PFP 
Sbjct: 49  ILDLCCGSGQATKFLVQYSD--NVTGLDASPLSLKRAQNNVP--QAKYVEAFAEEMPFPD 104

Query: 174 DYADR-YVSAGSIEYWPDP-QRGIREAYRVLKLGGKACIIGPVYPTFWL 220
           +  D  + S    E  P+  Q+ ++E YRVLK GG   ++    PT WL
Sbjct: 105 NQFDLVHTSVAMHEMQPEQLQQILKEVYRVLKPGGVLAVVDFHAPTNWL 153


>gi|334128753|ref|ZP_08502634.1| UbiE/COQ5 family methyltransferase [Centipeda periodontii DSM 2778]
 gi|333386490|gb|EGK57704.1| UbiE/COQ5 family methyltransferase [Centipeda periodontii DSM 2778]
          Length = 216

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 9/171 (5%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILD--QSPHQLAKAKQKEPLK- 157
            L   DLS  +  V+D+G G G T   + + V   ++  +D  ++  + ++A   E ++ 
Sbjct: 44  GLSHIDLSTDDT-VLDIGCGGGNTLARMAERVTKGHLVGIDYAEASVEASRAFNAELIEA 102

Query: 158 -ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
              +I+ G  E LPF   + D  V+  S  +WP P+  ++E  RV++ GG   ++  +Y 
Sbjct: 103 GRMEILHGSVEHLPFADGHFDAVVTVESFYFWPSPEESLKEVARVIRRGGTFLLLAEIYG 162

Query: 217 T----FWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVR 263
                  +    AD  +  P  EE+   F  AGF+ V L     +++  VR
Sbjct: 163 RDDLPAGIRTKIADYDLTNPTPEEFRRLFHAAGFRVVALDFKEGEYWIAVR 213


>gi|420184452|ref|ZP_14690561.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM040]
 gi|394257103|gb|EJE02025.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM040]
          Length = 241

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L+  ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLENIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEIHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|157964828|ref|YP_001499652.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           massiliae MTU5]
 gi|167011610|sp|A8F2G9.1|UBIE_RICM5 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|157844604|gb|ABV85105.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Rickettsia massiliae MTU5]
          Length = 248

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIVGNKEAYEYLVESIELFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|223717793|dbj|BAH22767.1| putative methyltransferase [Microcystis aeruginosa K-139]
          Length = 262

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ +REA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLREAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVRR 264
             + W+   R 
Sbjct: 203 TEECWFIHFRH 213


>gi|88608508|ref|YP_506814.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Neorickettsia sennetsu str. Miyayama]
 gi|88600677|gb|ABD46145.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Neorickettsia sennetsu str. Miyayama]
          Length = 230

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 29/172 (16%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAE 167
           N  V+D+  GTG  TL ++K      + + D++   L  AK +   E     K+V  DA 
Sbjct: 45  NQRVLDMAAGTGDITLRLLKTHIPVEIILCDKNHEMLEIAKDRLLDEGYVNLKVVSADAA 104

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPT 217
            LPF     D YV A  +  + + +R + EAYRVLK GG+ +C+         +  +Y  
Sbjct: 105 QLPFEDCSFDHYVVAFGVRNFSNIERSLTEAYRVLKPGGRFSCLEFSKVKNKCMNSLYNL 164

Query: 218 F------WLSR----------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           +      W+            Y  +    FP  E + E  + AGF   + +R
Sbjct: 165 YSHTFIPWVGEKITKNRQAYTYLIESIQDFPDAETFCEIIRSAGFGRTKYRR 216


>gi|114320786|ref|YP_742469.1| type 11 methyltransferase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227180|gb|ABI56979.1| Methyltransferase type 11 [Alkalilimnicola ehrlichii MLHE-1]
          Length = 409

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 30/173 (17%)

Query: 98  RDDALEPADLSNRNMLVVDVGGGTGFTTL---GIVKHVDAKNVTILDQSPHQLAK---AK 151
           R +A+ P D       V+D+G G G  +L   G+V    A  V  LD +P   A    A 
Sbjct: 69  RAEAVRPGDT------VLDIGAGAGNDSLIAAGLVG--SAGRVIALDLTPAMTATLYHAA 120

Query: 152 QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK---- 207
           Q        +V+G AE LP      D   S G++   PD +R + E +RVL+ GG+    
Sbjct: 121 QAGGCDNVAVVQGSAERLPLSDGSVDVVTSNGALNLVPDKRRAVAEMFRVLRPGGRLQMA 180

Query: 208 -ACIIGPVY------PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
              I  PV       P  W+     +  +    +EE +  F++AGF+ V++ R
Sbjct: 181 DVVIRRPVTVDCGEDPRLWV-----ECVVGATVDEELLHLFREAGFEAVEVLR 228


>gi|86141312|ref|ZP_01059858.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Leeuwenhoekiella blandensis MED217]
 gi|85831871|gb|EAQ50326.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Leeuwenhoekiella blandensis MED217]
          Length = 242

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC----KIVEGDAEDL 169
           ++DV  GTG   + + K  DA+ +  LD S   L+  K+K   K      K+V+GD+E+L
Sbjct: 61  ILDVATGTGDLAINLAK-TDAEEIIGLDISAGMLSVGKEKVAAKNLDDRIKMVQGDSENL 119

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           PF  DY D    A  I  +   ++G+ E  RVLK GG   I+    PT
Sbjct: 120 PFEDDYFDAITVAFGIRNFETLEKGLAEILRVLKPGGIFVILETSVPT 167


>gi|373850740|ref|ZP_09593541.1| transcriptional regulator, ArsR family [Opitutaceae bacterium TAV5]
 gi|372476905|gb|EHP36914.1| transcriptional regulator, ArsR family [Opitutaceae bacterium TAV5]
          Length = 313

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDLP 170
           + D+G G G  +  + +   A+ V  +D SP  +    +   +          GD E +P
Sbjct: 150 IADLGAGEGLISQLLARR--ARQVWCIDNSPRMVEVGTELAARNGFANLTYKLGDIEQVP 207

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADVWM 229
            P    D  + + ++ +   PQR + EA R+LK GG+  ++     TF  +R  +ADVW+
Sbjct: 208 LPDASVDLAILSQALHHARHPQRAVSEAARILKPGGQLLLLDLKEHTFEKARELYADVWL 267

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASG 281
            F +E     + +KAGF+ + +  +  +      +         +G KPA G
Sbjct: 268 GF-RETTLHGFLEKAGFRQIDITTVARE-----PQEPFFQTLLASGSKPAKG 313


>gi|379712778|ref|YP_005301117.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           philipii str. 364D]
 gi|376329423|gb|AFB26660.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           philipii str. 364D]
          Length = 248

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMLKDAGFEEVGYKNL 235


>gi|383501375|ref|YP_005414734.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           australis str. Cutlack]
 gi|378932386|gb|AFC70891.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           australis str. Cutlack]
          Length = 248

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKN---VTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K   D  N   +T+ D +   L  AK+K       +  K
Sbjct: 56  NLNSYILDVASGSGDIALKLAKKARDRGNNIALTLSDINEEMLKHAKKKSIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKACI--------- 210
                AE+LPFP +  D Y  A  I   PD  + ++EAYRVLK +G   C+         
Sbjct: 116 FTVASAEELPFPDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFLCLEFSKVKESH 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
               Y  +  S                 Y  +   LFP ++E+    ++AGF++V  K +
Sbjct: 176 FKDFYKFYSFSIIPTIGQVITGNKEAYEYLVESIELFPSQDEFRIMIKEAGFEEVGYKNL 235


>gi|16081040|ref|NP_391868.1| S-adenosylmethionine-dependent methyltransferase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221311961|ref|ZP_03593808.1| hypothetical protein Bsubs1_21511 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316285|ref|ZP_03598090.1| hypothetical protein BsubsN3_21422 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321198|ref|ZP_03602492.1| hypothetical protein BsubsJ_21365 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325481|ref|ZP_03606775.1| hypothetical protein BsubsS_21521 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|402778154|ref|YP_006632098.1| S-adenosylmethionine-dependentmethyltransferase [Bacillus subtilis
           QB928]
 gi|452913090|ref|ZP_21961718.1| methyltransferase domain protein [Bacillus subtilis MB73/2]
 gi|1176975|sp|P46326.1|YXBB_BACSU RecName: Full=Uncharacterized protein YxbB
 gi|904194|dbj|BAA21596.1| yxbB [Bacillus subtilis]
 gi|2636535|emb|CAB16025.1| putative S-adenosylmethionine-dependent methyltransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|402483333|gb|AFQ59842.1| Putative S-adenosylmethionine-dependentmethyltransferase [Bacillus
           subtilis QB928]
 gi|407962836|dbj|BAM56076.1| S-adenosylmethionine-dependentmethyltransferase [Bacillus subtilis
           BEST7613]
 gi|407966848|dbj|BAM60087.1| S-adenosylmethionine-dependentmethyltransferase [Bacillus subtilis
           BEST7003]
 gi|452118118|gb|EME08512.1| methyltransferase domain protein [Bacillus subtilis MB73/2]
          Length = 244

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 7/114 (6%)

Query: 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP--HQLAKAKQKEPLKECKIVEGD 165
           S +N +++D+G G G+ ++ + K  +A +V  +D +P  H++A+ + K+      ++  D
Sbjct: 34  SPKNKVIIDMGTGPGYLSIQLAKRTNA-HVHAVDINPAMHEIAQEEAKKS-GVSSLISFD 91

Query: 166 AED---LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
            ED   L +   YAD  VS   + +W D  +G++E YRVL  GGK  I+    P
Sbjct: 92  LEDVHHLSYADQYADFIVSYSCLHHWEDVVKGLKECYRVLAPGGKIVILDTFNP 145


>gi|333977622|ref|YP_004515567.1| type 11 methyltransferase [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333821103|gb|AEG13766.1| Methyltransferase type 11 [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 306

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query: 83  VYD--HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           +YD  H IN     +  ++  L   D+  ++ +++D G GTGF    I+  +  K +  L
Sbjct: 18  LYDKIHYINK----DKFKNTLLNYLDVE-KDCIILDFGTGTGFLA-SILAELGYKRIIGL 71

Query: 141 DQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYR 200
           D + + L +AKQK       +V GD  +LP   +  D  VS   +   PDP+R I+E  R
Sbjct: 72  DINEYMLLRAKQKLSGFPVMLVRGDGLNLPLKDNSVDAVVSRWVLWVMPDPERAIKEMIR 131

Query: 201 VLKLGGKA 208
           V K GGK 
Sbjct: 132 VTKPGGKV 139


>gi|332639037|ref|ZP_08417900.1| ubiquinone/menaquinone biosynthesis methyltransferase [Weissella
           cibaria KACC 11862]
          Length = 233

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 16/131 (12%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKI------V 162
           +N  ++DV  GTG  T+ + K + D  +VT  D S   LA A++K  ++E  +       
Sbjct: 46  KNGQILDVAAGTGDWTIALAKELGDKGHVTGFDLSSEMLAVAREK--VREAGVSFWVTLT 103

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYP 216
           +G+A +LP+  D  D       +   PD ++G++E YRVLK GG+  ++       PV  
Sbjct: 104 QGNAMELPYEDDTFDLVTIGFGLRNLPDAEKGMQELYRVLKPGGQLVVLETSQPDNPVIK 163

Query: 217 TFWLSRYFADV 227
            FW   YF  V
Sbjct: 164 PFW-KMYFKGV 173


>gi|260893457|ref|YP_003239554.1| type 11 methyltransferase [Ammonifex degensii KC4]
 gi|260865598|gb|ACX52704.1| Methyltransferase type 11 [Ammonifex degensii KC4]
          Length = 225

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D G GTG  +  +        VT +D SP  LA A++K        +EGD   LPFP 
Sbjct: 43  VLDAGCGTGVVSRALA--AAGAEVTGIDISPAMLAVAREKGAGGNIVYLEGDMSSLPFPD 100

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
              D  V   ++E+  +P+R + E +RVLK GG+  +
Sbjct: 101 ASFDAVVCFTALEFVAEPERALEEMWRVLKPGGRLLV 137


>gi|402774663|ref|YP_006628607.1| methyltransferase [Bacillus subtilis QB928]
 gi|418034485|ref|ZP_12672957.1| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
           SC-8]
 gi|452916526|ref|ZP_21965149.1| methyltransferase domain protein [Bacillus subtilis MB73/2]
 gi|351468738|gb|EHA28947.1| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
           SC-8]
 gi|402479848|gb|AFQ56357.1| Putative methyltransferase [Bacillus subtilis QB928]
 gi|407956113|dbj|BAM49353.1| methyltransferase [Bacillus subtilis BEST7613]
 gi|407963384|dbj|BAM56623.1| methyltransferase [Bacillus subtilis BEST7003]
 gi|452114666|gb|EME05065.1| methyltransferase domain protein [Bacillus subtilis MB73/2]
          Length = 198

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   K  ++++G  E  P P 
Sbjct: 47  ILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAARRVKPKGVRLIQGSIETFPLPA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +GI++ YR LK GGKA I      T       A        
Sbjct: 107 SFYDKVISVNNYTIWNDQTKGIKQIYRALKPGGKAAI------TMQPREADASPEKTKSF 160

Query: 234 EEEYIEWFQKAGFK--DVQLKRIGPK 257
             + I  F+ AGF+  D+Q K I P+
Sbjct: 161 GRQMIADFKAAGFEDIDIQFKNIKPE 186


>gi|427407083|ref|ZP_18897288.1| hypothetical protein HMPREF9161_01648 [Selenomonas sp. F0473]
 gi|425707558|gb|EKU70602.1| hypothetical protein HMPREF9161_01648 [Selenomonas sp. F0473]
          Length = 216

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 8/148 (5%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDA 166
           N  V+D+G G G T   + + V A ++  +D S   +  ++            +I+ G  
Sbjct: 53  NDTVLDIGCGGGNTLARMAERVTAGHLVGIDYSETSVEASRAFNSALVASGRMEILSGSV 112

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---RY 223
           E LPFP  + D+ V+  S  +WP+P   ++E  RV+K GG   ++  +Y    L    R 
Sbjct: 113 ESLPFPDAHFDKVVTVESFYFWPNPAESLKEVARVVKPGGMFLLLAEIYERPDLPAGIRE 172

Query: 224 FADVWMLF-PKEEEYIEWFQKAGFKDVQ 250
             + + L  P   E+   F+ AGF +V+
Sbjct: 173 KVEAYELTNPTPAEFERLFRAAGFPEVE 200


>gi|423279287|ref|ZP_17258200.1| hypothetical protein HMPREF1203_02417 [Bacteroides fragilis HMW
           610]
 gi|404585456|gb|EKA90072.1| hypothetical protein HMPREF1203_02417 [Bacteroides fragilis HMW
           610]
          Length = 276

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           VVD+G G G         V ++  V  +D SP  + KA+    K      + +EGD E++
Sbjct: 85  VVDLGSGAGNDCFIARAEVGESGKVIGIDFSPQMITKARNNALKRGYANVEFLEGDIENM 144

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   + AD  VS   +   P+     +E YRVLK GG  C I  V       + F D   
Sbjct: 145 PLLDNTADVVVSNCVLNLLPEKNIIFKEIYRVLKPGGHFC-ISDVVLNGTFPKKFTDNAA 203

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKR 253
           ++        ++E+Y++  +KA F D+++ R
Sbjct: 204 MYAGCIASAIQKEDYLQEIEKADFVDIRIAR 234


>gi|383319063|ref|YP_005379904.1| ubiquinone/menaquinone biosynthesis methylase [Methanocella
           conradii HZ254]
 gi|379320433|gb|AFC99385.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Methanocella conradii HZ254]
          Length = 177

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 5/125 (4%)

Query: 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC 159
           D L    L  +   +++VG GTG     I+ +        +D S   L +AK++ P   C
Sbjct: 36  DMLGLEVLDGKKCRLLEVGTGTGIHARYIMDNFKNVEYVGVDISRGMLLEAKKRLP--GC 93

Query: 160 K-IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP--VYP 216
           + ++ GD E+LPF     D    +GS+ ++ DP++G+ E  RV+K GG   I+ P  ++P
Sbjct: 94  RTLLAGDGENLPFKAGSFDSVYISGSLHHFGDPKKGLYELVRVVKQGGNLLIMEPYWLFP 153

Query: 217 TFWLS 221
           T +L+
Sbjct: 154 TNFLA 158


>gi|443649893|ref|ZP_21130358.1| methyltransferase small domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334790|gb|ELS49282.1| methyltransferase small domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 266

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 33  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 92

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ ++EA+
Sbjct: 93  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLQEAW 150

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDV+   +
Sbjct: 151 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVKFVEV 206

Query: 255 GPK-WYRGVRR 264
             + W+R  R 
Sbjct: 207 TEECWFRHFRH 217


>gi|323694931|ref|ZP_08109081.1| hypothetical protein HMPREF9475_03945 [Clostridium symbiosum
           WAL-14673]
 gi|323501021|gb|EGB16933.1| hypothetical protein HMPREF9475_03945 [Clostridium symbiosum
           WAL-14673]
          Length = 222

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK--QKEPLK--ECKIVEGDAEDL 169
           + ++G G G     +++   A  VT LD S   + KAK   ++ L+   C+I++GD   L
Sbjct: 49  IAELGCGGGRNIRALLRKYPAATVTALDYSEISVEKAKSVNRKGLQASRCRIIQGDVSCL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-----YPTFWLSRYF 224
           PF     D   +  ++ +WP P    RE YR L+ GG   I+        + + WLS   
Sbjct: 109 PFEDGVFDLVTAFETVYFWPGPTESFREVYRTLRPGGIFLIVNESDGEDPHASKWLS--V 166

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            D   +F   ++   +  +AGF ++ + R   K
Sbjct: 167 IDGMRIFDG-DQLARFLTEAGFSEIIVNRNAKK 198


>gi|420204394|ref|ZP_14709952.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM015]
 gi|394273404|gb|EJE17835.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM015]
          Length = 241

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L   ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLDNIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|154254089|ref|YP_001414913.1| ubiquinone/menaquinone biosynthesis methyltransferase [Parvibaculum
           lavamentivorans DS-1]
 gi|154158039|gb|ABS65256.1| ubiquinone/menaquinone biosynthesis methyltransferase [Parvibaculum
           lavamentivorans DS-1]
          Length = 262

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 31/176 (17%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEG 164
           R   ++DV GGTG      ++    A  VT+ D + H L     +A+ K      +   G
Sbjct: 74  RPFHLIDVAGGTGDIAFRFLERAGVASQVTVCDINEHMLGVGQGRAEAKAFEGRIEFACG 133

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPV 214
           DAE LPFP +  D Y  A  I       + +REAYRVLK GG+  C+         I  +
Sbjct: 134 DAEHLPFPDNSFDAYTIAFGIRNVTHVDQALREAYRVLKPGGRFLCLEFSRVAVPGIDDI 193

Query: 215 YPTF----------WLS------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           Y  +          W++      +Y  +    FP +E +     +AGF +V  + +
Sbjct: 194 YEAYSFAAIPRMGKWVTGDDAPYQYLVESIRRFPDQETFKRMIGEAGFGNVSYRNV 249


>gi|242242750|ref|ZP_04797195.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis W23144]
 gi|242233886|gb|EES36198.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis W23144]
          Length = 243

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L   ++V GDA +LPF 
Sbjct: 56  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLDNIQLVHGDAMNLPFD 115

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 116 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 174

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 175 VMPIFGKMFAKSKEEYEWLQQSTFN 199


>gi|416125223|ref|ZP_11595821.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           epidermidis FRI909]
 gi|418327900|ref|ZP_12939032.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis 14.1.R1.SE]
 gi|418614692|ref|ZP_13177654.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU118]
 gi|418630432|ref|ZP_13192913.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU128]
 gi|418633072|ref|ZP_13195489.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU129]
 gi|420174759|ref|ZP_14681207.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM061]
 gi|420178176|ref|ZP_14684509.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM057]
 gi|420179838|ref|ZP_14686115.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM053]
 gi|420190093|ref|ZP_14696037.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM037]
 gi|420199413|ref|ZP_14705091.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM031]
 gi|319400820|gb|EFV89039.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           epidermidis FRI909]
 gi|365232459|gb|EHM73455.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis 14.1.R1.SE]
 gi|374819228|gb|EHR83356.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU118]
 gi|374837622|gb|EHS01185.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU128]
 gi|374839891|gb|EHS03398.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis VCU129]
 gi|394244663|gb|EJD89998.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM061]
 gi|394246802|gb|EJD92054.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM057]
 gi|394252433|gb|EJD97468.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM053]
 gi|394258984|gb|EJE03854.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM037]
 gi|394272195|gb|EJE16664.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM031]
          Length = 241

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L   ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLDNIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E +RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEMHRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|383312986|ref|YP_005365787.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Rickettsia amblyommii str. GAT-30V]
 gi|378931646|gb|AFC70155.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Rickettsia amblyommii str. GAT-30V]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNVIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|383482548|ref|YP_005391462.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           montanensis str. OSU 85-930]
 gi|378934902|gb|AFC73403.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           montanensis str. OSU 85-930]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|145220286|ref|YP_001130995.1| demethylmenaquinone methyltransferase [Chlorobium phaeovibrioides
           DSM 265]
 gi|145206450|gb|ABP37493.1| demethylmenaquinone methyltransferase [Chlorobium phaeovibrioides
           DSM 265]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K +    VT LD SP  LA A++K P       EG AE LPF  
Sbjct: 73  ILDVATGTGDLAAAMGK-IPGATVTALDLSPQMLAIARKKYP--GITFHEGYAEALPF-K 128

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           D +   VSAG  +  + D ++G++E +RVLK GG A II P+ P
Sbjct: 129 DASFDIVSAGFGVRNFEDLEKGMQEFHRVLKPGGSALIIEPMIP 172


>gi|379019511|ref|YP_005295745.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hlp#2]
 gi|376332091|gb|AFB29325.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hlp#2]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|220909242|ref|YP_002484553.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219865853|gb|ACL46192.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 268

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 93  WTEDMRDDALEPADL-----------SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILD 141
           W E++R    E  D            +N+ +L  +VG G G   L   +H        + 
Sbjct: 33  WFEEVRRSRYEVTDTWMKETIDFSIAANKKLL--EVGHGIGSDLLTFCEHGAEVYGIDIT 90

Query: 142 QSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRV 201
           +  HQLAK   +   K C++   DA ++ FP++Y D   S G + + PD  R I E YRV
Sbjct: 91  EKHHQLAKKNFELHGKTCQLKLCDAANIDFPSEYFDVVYSHGVLHHTPDTIRCIGEIYRV 150

Query: 202 LKLGGKACIIGPVYPTF 218
           LK GGK   I  +Y T+
Sbjct: 151 LKPGGK--FILSLYHTY 165


>gi|157828890|ref|YP_001495132.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933616|ref|YP_001650405.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Iowa]
 gi|374319633|ref|YP_005066132.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia slovaca 13-B]
 gi|378721711|ref|YP_005286598.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Colombia]
 gi|378723059|ref|YP_005287945.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Arizona]
 gi|378724413|ref|YP_005289297.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hauke]
 gi|379016042|ref|YP_005292277.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Brazil]
 gi|379018198|ref|YP_005294433.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hino]
 gi|383751678|ref|YP_005426779.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           slovaca str. D-CWPP]
 gi|166234743|sp|A8GT99.1|UBIE_RICRS RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|189037604|sp|B0BUT9.1|UBIE_RICRO RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|157801371|gb|ABV76624.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908703|gb|ABY72999.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Iowa]
 gi|360042182|gb|AEV92564.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia slovaca 13-B]
 gi|376324566|gb|AFB21806.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Brazil]
 gi|376326735|gb|AFB23974.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Colombia]
 gi|376328083|gb|AFB25321.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Arizona]
 gi|376330764|gb|AFB28000.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hino]
 gi|376333428|gb|AFB30661.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           rickettsii str. Hauke]
 gi|379774692|gb|AFD20048.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           slovaca str. D-CWPP]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|294054907|ref|YP_003548565.1| ArsR family transcriptional regulator [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614240|gb|ADE54395.1| transcriptional regulator, ArsR family [Coraliomargarita
           akajimensis DSM 45221]
          Length = 310

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 7/148 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           + D+G G G  +  + +   A+ V  +D SP  +    +  +K          GD E++P
Sbjct: 150 IADLGAGEGLISQLLARR--AEKVICVDNSPKMVEVGTELAKKNGFTNLTYKLGDIEEVP 207

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADVWM 229
                 D  + + ++ + P P+  +REA+R+L+ GG+  I+  +   F  +   +ADVW+
Sbjct: 208 LADASVDLALLSQALHHAPKPELAVREAHRILRPGGQLIILDLLEHQFEKAHDLYADVWL 267

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            F + + Y ++ + AGF+ +++  +  +
Sbjct: 268 GFSENKLY-QFLKSAGFRQIEVSVVAKE 294


>gi|414077056|ref|YP_006996374.1| methyltransferase ApdE [Anabaena sp. 90]
 gi|9715737|emb|CAC01607.1| putative methyltransferase [Anabaena circinalis 90]
 gi|413970472|gb|AFW94561.1| putative methyltransferase ApdE [Anabaena sp. 90]
          Length = 263

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 22/178 (12%)

Query: 89  NPGHWTEDMRDDALEPADLSNRNML--------VVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           N G+W  D ++      +L  + +         ++DVG G G TT  ++ +    +V  +
Sbjct: 30  NVGYWHSDTQNQHEACFNLMEKLLEFIPRKQGNILDVGCGLGATTSHLLNYYSPADVVGI 89

Query: 141 DQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYR 200
           + S  Q+ ++    P   CK +  DA  + F  D+ D  +   +  Y+   ++ ++EA R
Sbjct: 90  NISRKQIERSIVNAP--GCKFICMDAVQMEFEDDFFDNIICVEAAFYFNTREKFLKEAMR 147

Query: 201 VLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKE-------EEYIEWFQKAGFKDVQL 251
           VLK GG   +   ++ T   ++YF D  ++ P+        E+Y   +Q+AGF+ ++ 
Sbjct: 148 VLKPGGNLILADLIFDT---TKYFGD--LIVPENIVKDKDIEDYKRLYQQAGFQPIEF 200


>gi|15892960|ref|NP_360674.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           conorii str. Malish 7]
 gi|21542286|sp|Q92GT5.1|UBIE_RICCN RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|15620155|gb|AAL03575.1| ubiquinone/menaquinone biosynthesis methlytransferase ubiE
           [Rickettsia conorii str. Malish 7]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|159026016|emb|CAO86270.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 262

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   Q+ ++EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRQQFLQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDV+   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVKFVEV 202

Query: 255 GPK-WYRGVRR 264
             + W+R  R 
Sbjct: 203 TEECWFRHFRH 213


>gi|398830984|ref|ZP_10589164.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Phyllobacterium sp. YR531]
 gi|398212996|gb|EJM99594.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Phyllobacterium sp. YR531]
          Length = 258

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 31/173 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGD 165
           N  V+DV GGTG     IV+  +   + T+LD +   L     +A +K   +  + VE +
Sbjct: 71  NWKVLDVAGGTGDVAFKIVEASNRNAHATVLDINGSMLGVGRDRAAKKGLTENTEFVEAN 130

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVY 215
           AE+LPF ++  D Y  A  I   P   R + EAYRVLK GG+  C         ++  +Y
Sbjct: 131 AEELPFESNRFDAYTIAFGIRNVPHIDRALAEAYRVLKPGGRFLCLEFSEVELPVLDKLY 190

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             +  +                +Y  +    FP++ ++ +  + AGF+ V  +
Sbjct: 191 DAWSFNAIPKIGKAVTGDADSYQYLVESIRKFPRQSDFADMIRNAGFERVSWR 243


>gi|34581345|ref|ZP_00142825.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Rickettsia sibirica 246]
 gi|229587036|ref|YP_002845537.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           africae ESF-5]
 gi|383484364|ref|YP_005393277.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           parkeri str. Portsmouth]
 gi|259550985|sp|C3PLF4.1|UBIE_RICAE RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|28262730|gb|EAA26234.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Rickettsia sibirica 246]
 gi|228022086|gb|ACP53794.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Rickettsia africae ESF-5]
 gi|378936718|gb|AFC75218.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           parkeri str. Portsmouth]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|166368737|ref|YP_001661010.1| putative methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166091110|dbj|BAG05818.1| putative methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 262

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 20/190 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   ++ ++EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRRQFLQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVR 263
             + W+R  R
Sbjct: 203 TEECWFRHFR 212


>gi|322834105|ref|YP_004214132.1| type 11 methyltransferase [Rahnella sp. Y9602]
 gi|321169306|gb|ADW75005.1| Methyltransferase type 11 [Rahnella sp. Y9602]
          Length = 256

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 6/121 (4%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G   F   G+VK+V A +++   Q    +A+A + + L    + +G AE LP
Sbjct: 49  VIDLGCGAGHASFVAAGVVKNVIAYDLS--SQMLDVVAQAARDKQLTNITVQQGVAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + +RE  RVLK GGK  ++  V P    L+ Y   V +
Sbjct: 107 FDDRSADVIISRYSAHHWHDVGQALREVARVLKPGGKFIMMDVVSPGHPLLNIYLQTVEV 166

Query: 230 L 230
           L
Sbjct: 167 L 167


>gi|291280020|ref|YP_003496855.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Deferribacter desulfuricans SSM1]
 gi|290754722|dbj|BAI81099.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Deferribacter desulfuricans SSM1]
          Length = 226

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 28/169 (16%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           N    ++D+  GTG   L + K     NV   D S + L  AK+K  L +  +   DA  
Sbjct: 45  NEGSRILDLACGTGDMLLELKKMKVKCNVIGGDFSFNMLMIAKKK--LNDLPLTCADAHF 102

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FW 219
           LPF  +  D    A       D ++G++E YRVLK GGKACI+    P          F+
Sbjct: 103 LPFKDESFDYITIAFGFRNVTDKEKGLKEMYRVLKKGGKACILEFSQPDNKFFSKVYRFY 162

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
            ++                 Y  D    FPK+++Y +    AGFK V+ 
Sbjct: 163 FTKVLPFIGGLISGNRSAYEYLPDSVYKFPKKDKYEKMILSAGFKKVEF 211


>gi|51473860|ref|YP_067617.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           typhi str. Wilmington]
 gi|383752634|ref|YP_005427734.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           typhi str. TH1527]
 gi|383843470|ref|YP_005423973.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           typhi str. B9991CWPP]
 gi|56749693|sp|Q68W57.1|UBIE_RICTY RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|51460172|gb|AAU04135.1| ubiquinone/menaquinone biosynthesis methlytransferase [Rickettsia
           typhi str. Wilmington]
 gi|380759277|gb|AFE54512.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           typhi str. TH1527]
 gi|380760117|gb|AFE55351.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           typhi str. B9991CWPP]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK--NVTIL--DQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K   A+  N++++  D +   L  AK+K       +  K
Sbjct: 56  NLNSNILDVASGSGDIALQLAKKAKARGNNISLILSDINEEMLNNAKKKSIDLNLFQNMK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKAC---------I 210
            +  +AE+LPF  +  D Y  A  I   PD  + ++EAYRVLK +G   C         I
Sbjct: 116 FIVANAEELPFLDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKEGI 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++++    + +GF++V  K +
Sbjct: 176 LKDFYKFYSFTIIPSIGQIIARNKEAYEYLVESIALFPSQDDFRIMIKASGFEEVHYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|395785455|ref|ZP_10465187.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella tamiae Th239]
 gi|423717646|ref|ZP_17691836.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella tamiae Th307]
 gi|395425002|gb|EJF91173.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella tamiae Th239]
 gi|395427046|gb|EJF93162.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella tamiae Th307]
          Length = 260

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 33/185 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPL 156
           L P+   N N+L  DV GGTG     IV+  + + + T+LD +   L     +A++K   
Sbjct: 66  LSPSKTKNWNVL--DVAGGTGDIAFRIVEASNRQAHATVLDINSSMLEVGTERAQKKGLS 123

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                +E +AE+LPF  D  D Y  A  I   P   + + EA+RVLK GG+  C      
Sbjct: 124 SFIDFIEANAENLPFDEDSFDAYTIAFGIRNVPHIDQALSEAFRVLKPGGRFMCLEFSEV 183

Query: 210 ---IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              I+  +Y  +                   +Y  +    FPK+ ++     KAGF  V 
Sbjct: 184 EMPILDKIYDLWSFHGIPRVGQMIAGDADSYKYLVESIRKFPKQTDFAAMISKAGFSHVS 243

Query: 251 LKRIG 255
            + + 
Sbjct: 244 YRNLN 248


>gi|384259282|ref|YP_005403216.1| type 11 methyltransferase [Rahnella aquatilis HX2]
 gi|380755258|gb|AFE59649.1| methyltransferase type 11 [Rahnella aquatilis HX2]
          Length = 256

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 6/121 (4%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G   F   G+VK+V A +++   Q    +A+A + + L    + +G AE LP
Sbjct: 49  VIDLGCGAGHASFVAAGVVKNVIAYDLS--SQMLDVVAQAARDKQLTNITVQQGVAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + +RE  RVLK GGK  ++  V P    L+ Y   V +
Sbjct: 107 FDDRSADVIISRYSAHHWHDVGQALREVARVLKPGGKFIMMDVVSPGHPLLNIYLQTVEV 166

Query: 230 L 230
           L
Sbjct: 167 L 167


>gi|167771786|ref|ZP_02443839.1| hypothetical protein ANACOL_03158 [Anaerotruncus colihominis DSM
           17241]
 gi|167666426|gb|EDS10556.1| methyltransferase domain protein [Anaerotruncus colihominis DSM
           17241]
          Length = 206

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEP-- 155
           DD L  A +  R+ +++DVG G+G   L +++    K   I ++Q+  +L +A  +E   
Sbjct: 27  DDIL--ARIPRRDGVLIDVGCGSGHLGLALLERTRYKGCLIDINQTALELGRAHARERGL 84

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
                 +  D   + FP  YAD  +S GS  +W D ++ + E YRVL  GG   I G
Sbjct: 85  ADRAVFMRQDVHSMDFPDGYADLIISRGSYHFWADLEKALTEIYRVLAPGGNTYIGG 141


>gi|296167245|ref|ZP_06849650.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897421|gb|EFG77022.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           + +DVG G G  T  + +    + + + +D S   L +A + E   +   ++ DA+ LP 
Sbjct: 94  VALDVGSGPGNVTASLARAAGPEGLALGIDISEPMLERAVRNEAGPQVGFIKADAQRLPL 153

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP-VYPTFWLSRYFADVWML 230
             D  D  +S   ++  PDP   + E  RVL+ GG+  ++ P V P   L +   +V   
Sbjct: 154 RDDTVDAVISTAVLQLVPDPAAALGEMARVLRPGGRLAVMVPTVGPAARLFQKLPNVGAH 213

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGP-KWYR 260
              ++E  +  +  GF  V++K  G  +W R
Sbjct: 214 VFGDDEIGDILEGHGFVSVRVKNYGTVQWVR 244


>gi|237747317|ref|ZP_04577797.1| ubiquinone/menaquinone biosynthesis methyltransferase [Oxalobacter
           formigenes HOxBLS]
 gi|229378668|gb|EEO28759.1| ubiquinone/menaquinone biosynthesis methyltransferase [Oxalobacter
           formigenes HOxBLS]
          Length = 244

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 13/106 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK--------NVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           V+DV GGTG  T    K V A+        N T+L Q   +L       P+  C     D
Sbjct: 63  VLDVAGGTGDLTRSFSKQVGAEGEVWLTDINETMLQQGRDRLLNKGIVVPVMVC-----D 117

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           AEDLPFP DY DR + +  +      ++ + E  RVLK GGK  ++
Sbjct: 118 AEDLPFPDDYFDRVIVSFGLRNMTHKEKALSEMNRVLKSGGKLLVL 163


>gi|374994975|ref|YP_004970474.1| methylase [Desulfosporosinus orientis DSM 765]
 gi|357213341|gb|AET67959.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus orientis DSM 765]
          Length = 205

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           +M V++V  GTG   LGI K V  + V   D SP  +  AK+K      K    DA  L 
Sbjct: 41  DMRVLEVATGTGLIALGIAKFV--RQVEATDFSPKMIETAKKKIAPGNVKFSIEDATALS 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF----AD 226
           F  D+ D  + + ++   PDP+  +    RVLK GG   +I P +    L   F    A 
Sbjct: 99  FANDWFDAVIISNALHIMPDPEAALASIRRVLKPGG--LLIAPTFSHGHLKNSFWNLNAK 156

Query: 227 VWMLFPKE-------EEYIEWFQKAGF 246
           +  L   E       EEY  + +K GF
Sbjct: 157 ILKLIGFETYSKWTPEEYTGFIEKNGF 183


>gi|390629323|ref|ZP_10257319.1| Demethylmenaquinone methyltransferase [Weissella confusa LBAE
           C39-2]
 gi|390485525|emb|CCF29667.1| Demethylmenaquinone methyltransferase [Weissella confusa LBAE
           C39-2]
          Length = 233

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 12/135 (8%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECK----IVEG 164
           +N  ++DV  GTG  T+ + K +  K +VT  D SP  LA A++K           + +G
Sbjct: 46  KNGQILDVAAGTGDWTIALAKELGEKGHVTGFDLSPEMLAVAREKVVEAGVSYWVTLTQG 105

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTF 218
           +A +LP+  D  D       +   PD  +G++E YRVLK GG+  ++       PV   F
Sbjct: 106 NAMELPYEDDTFDLVTIGFGLRNLPDTAKGMQELYRVLKPGGELVVLETSQPDNPVIKPF 165

Query: 219 WLSRYFADVWMLFPK 233
           W   YF  V  +  K
Sbjct: 166 W-KMYFKGVMPMMGK 179


>gi|261863836|gb|ACY01395.1| O-methyl transferase [Streptomyces platensis subsp. rosaceus]
          Length = 281

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 27/234 (11%)

Query: 53  SLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHV----INPGHWTEDMRDDAL-EPADL 107
           S ++T+ P S P      +E    Y  L+ +        ++ G+W  D  D  L E AD 
Sbjct: 2   SSTSTTAPVSVPVSAPVPEEVGHLYDRLTALDTEAAGGSLHLGYWDVDDNDTPLVEAADR 61

Query: 108 SNRNML----------VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ-KEPL 156
               M           V+DVG G G   + I +   A +VT +  S  Q+A+A    E  
Sbjct: 62  LTDTMTDRLRIDQGQRVLDVGCGVGQPAMRIARRTGA-HVTGIAISKDQIARATALAEGA 120

Query: 157 KECKIVE---GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII-- 211
                VE    DA +LPFP D  D  ++  SI + PD  R + E  RVL+ GG+  +   
Sbjct: 121 GLSDRVEFRHADAMELPFPDDSFDAAIAIESIFHMPDRGRVLAEIRRVLRPGGRLVLTDF 180

Query: 212 ---GPVYPTFW--LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR 260
              GPV       + R   D  M   + E+Y+   + AG + V+L  I  +  R
Sbjct: 181 FERGPVPAEKQPAVDRLLRDFIMTLARPEDYVPMLRDAGLRFVELLDITEQSVR 234


>gi|239947087|ref|ZP_04698840.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia endosymbiont of Ixodes scapularis]
 gi|241068599|ref|XP_002408481.1| ubiquinone biosynthesis methyltransferase COQ5, putative [Ixodes
           scapularis]
 gi|215492469|gb|EEC02110.1| ubiquinone biosynthesis methyltransferase COQ5, putative [Ixodes
           scapularis]
 gi|239921363|gb|EER21387.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 248

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKN---VTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K   D  N   +T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRGNNIALTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP +  D Y  A  I   PD  + ++EAYR+LK  GK  C+         
Sbjct: 116 FTVASAEELPFPDNSFDYYTIAFGIRNVPDINKALKEAYRILKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    ++AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKEAGFEEVGYKNL 235


>gi|432330745|ref|YP_007248888.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Methanoregula formicicum SMSP]
 gi|432137454|gb|AGB02381.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Methanoregula formicicum SMSP]
          Length = 243

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 24/185 (12%)

Query: 84  YDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQ 142
           YDH+   G    +   D L  A   N ++L  D+G GT    L + K++ +    T LD 
Sbjct: 24  YDHLTR-GRPYHNHLSDHLIKALPQNGDLL--DIGCGTA---LFVEKYLRNGGTATGLDI 77

Query: 143 SPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
           S   L+KA+++ P   C  V G+ E LPF     D   S     Y   P+  + EAYRVL
Sbjct: 78  SGKMLSKARERCP--GCTFVAGNGEALPFQDQSFDAISSLLVFSYVKSPETMLAEAYRVL 135

Query: 203 KLGGK--ACIIG--------PVYPTFWLSRYFADVWM-----LFPKEEEYIEWFQKAGFK 247
           + GG    C +G        P    F     F  V M      +  EEE    F +AGF 
Sbjct: 136 RPGGSIAVCTLGKKLITRGIPALYHFSEKVKFQHVVMKNFGERYYNEEEMTRLFSEAGFD 195

Query: 248 DVQLK 252
           D+ +K
Sbjct: 196 DISVK 200


>gi|341584223|ref|YP_004764714.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           heilongjiangensis 054]
 gi|340808448|gb|AEK75036.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           heilongjiangensis 054]
          Length = 248

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  +
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLQ 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIALFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|254444222|ref|ZP_05057698.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235]
 gi|198258530|gb|EDY82838.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235]
          Length = 311

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH------QLAKAKQKEPLKECKIVEGDAE 167
           +VD+G G G  +  + +   A++V  +D S        +LAK  +   L   + + GD E
Sbjct: 150 IVDLGAGEGLISQLLARR--AEHVYCVDSSTRMVEVGTELAKTNK---LDNLEYILGDIE 204

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFAD 226
             P   +     + + ++ +   P+R I EA+R+LK GG+  II     TF  +R  +AD
Sbjct: 205 KTPLQNESVHLALLSQALHHALHPERAIAEAFRLLKPGGRLVIIDLKEHTFEKARELYAD 264

Query: 227 VWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            W+ F  E +   W + AGF+ V++  +  +
Sbjct: 265 HWLGFA-ENKLHSWMKDAGFESVEVTAVAKE 294


>gi|350273807|ref|YP_004885120.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           japonica YH]
 gi|348593020|dbj|BAK96981.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           japonica YH]
          Length = 248

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  +
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLQ 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNVIPSIGQMIAGNKEAYEYLVESIALFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|319898231|ref|YP_004158324.1| ubiquinone/menaquinone biosynthesis [Bartonella clarridgeiae 73]
 gi|319402195|emb|CBI75726.1| ubiquinone/menaquinone biosynthesis [Bartonella clarridgeiae 73]
          Length = 260

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 31/175 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAK---QKEPLKEC-KIVEGD 165
           N  V+DV GGTG     I+     K +VTILD +   L+  K   QK  L      +E +
Sbjct: 73  NWKVLDVAGGTGDIAFRILNASHRKAHVTILDINSSMLSVGKKRAQKNNLASLIDFIEAN 132

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVY 215
           AE LPF     + Y  A  I   P   + +REA+RVLK GG+  C         ++  +Y
Sbjct: 133 AEHLPFKDQSFNAYTIAFGIRNIPHIDKALREAFRVLKPGGRFLCLEFSNVEMPLLDKIY 192

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             +  +                RY  +    FPK+ ++    + AGF  V  + +
Sbjct: 193 DLWSFNAIPKLGQFITGNHDAYRYLVESIRKFPKQNDFAHMIRNAGFSSVSYRNL 247


>gi|242025186|ref|XP_002433007.1| ubiquinone biosynthesis methyltransferase COQ5, putative [Pediculus
           humanus corporis]
 gi|212518516|gb|EEB20269.1| ubiquinone biosynthesis methyltransferase COQ5, putative [Pediculus
           humanus corporis]
          Length = 288

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN----VTILDQSPHQLAKAKQKE-PLKECKI----VEG 164
           ++DV GGTG  +   +++V  K+    V++ D +P  L   K K   L  CK     VE 
Sbjct: 104 LLDVAGGTGDISFRFLRYVQKKSPESFVSVCDINPKMLEIGKSKSMKLDYCKNRMEWVEA 163

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI------------- 210
           +AE+LPF     D Y  A  I    D  + + EAYRVLK GG+  C+             
Sbjct: 164 NAEELPFKDKTYDAYTVAFGIRNVTDINKVLDEAYRVLKPGGRFLCLEFSEVNNEYLKWL 223

Query: 211 -----------IGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                      +G +    W + +Y  +    FP +E + E  + AGF+ V  + +
Sbjct: 224 YDQYSFQVIPALGELIAGEWKAYQYLVESIRNFPNQESFKELIENAGFRMVTYENL 279


>gi|255658337|ref|ZP_05403746.1| SAM-dependent methyltransferase [Mitsuokella multacida DSM 20544]
 gi|260849660|gb|EEX69667.1| SAM-dependent methyltransferase [Mitsuokella multacida DSM 20544]
          Length = 216

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDL 169
           V+D+G G G     +  H+   ++T +D +   +  ++Q         +  + EG  E L
Sbjct: 56  VLDIGCGGGANLRRMSAHIKNGHLTGVDYAKTSVDTSRQTNAADIAAGKMTVCEGSVEAL 115

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS----RYFA 225
           PF  D  D+  +  S  +WP P   ++E  RVLK GG   +I  +Y    LS        
Sbjct: 116 PFADDAFDKITTVESFYFWPTPPENLKEVRRVLKKGGTFLLIAEIYDHPGLSEEVQENIK 175

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQL 251
           +  +  P  E +   F+ AGF  V +
Sbjct: 176 NYRLYNPTPETFETIFRAAGFSAVTI 201


>gi|225018505|ref|ZP_03707697.1| hypothetical protein CLOSTMETH_02452 [Clostridium methylpentosum
           DSM 5476]
 gi|224948706|gb|EEG29915.1| hypothetical protein CLOSTMETH_02452 [Clostridium methylpentosum
           DSM 5476]
          Length = 206

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 26/202 (12%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           H +N GH    M D AL    L  +    +D+G G G     ++K + +  VT +D S  
Sbjct: 22  HKMNRGH--AAMTDWALSLLPLWQQGR-ALDIGCGGGKAVRRLLKGMGS--VTGVDYSEL 76

Query: 146 QLAKA--KQKEPLKE--CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRV 201
            + +A  + +  ++E   +I + DA +LPF  +  D   +  +I +WP+P+ G+REA RV
Sbjct: 77  SVQRASRENRRAIQEGRAEIFQADAANLPFAENTFDLATAIETIYFWPNPEAGLREALRV 136

Query: 202 LKLGGKACIIGPVYPTFWLSRYFADVWMLF----PKEEEYIEWFQKAGFKDVQLKRIGPK 257
           L+ G    +I  +       + + +V  L     P +    E   +AGF  V        
Sbjct: 137 LRPGATLAVICEMVAEEGKPQQYTEVIELLKLHIPTQNGLEELLSRAGFDKV-------- 188

Query: 258 WYRGVRRHGLIMGCSVTGVKPA 279
             R  R+ G +    VTG KPA
Sbjct: 189 --RSHRKDGWL---CVTGEKPA 205


>gi|225389732|ref|ZP_03759456.1| hypothetical protein CLOSTASPAR_03480 [Clostridium asparagiforme
           DSM 15981]
 gi|225044201|gb|EEG54447.1| hypothetical protein CLOSTASPAR_03480 [Clostridium asparagiforme
           DSM 15981]
          Length = 236

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 12/150 (8%)

Query: 94  TEDMRDDALE--PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151
           T+D    AL   P   S R   +++V  GTG  T+ + + +    +T LD SP  L +AK
Sbjct: 53  TQDYLCAALSGIPEGFSGR---LLEVPVGTGILTMPLYREMPEAEITCLDYSPEMLERAK 109

Query: 152 QK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC- 209
            + E L   +  +GD   LPF     D  +S      +PD +   RE +RVL+ GG  C 
Sbjct: 110 SRGEGLAHVRFQQGDVGALPFGNSSFDIVLSLNGFHAFPDKEAAWREIFRVLRPGGTFCG 169

Query: 210 ---IIGPVYPTFWLSR--YFADVWMLFPKE 234
              + G    T WL R  Y    W   P E
Sbjct: 170 CFYVRGQNRRTDWLIRRLYVPKGWFTPPFE 199


>gi|16077485|ref|NP_388299.1| methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308237|ref|ZP_03590084.1| hypothetical protein Bsubs1_02378 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312559|ref|ZP_03594364.1| hypothetical protein BsubsN3_02354 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317495|ref|ZP_03598789.1| hypothetical protein BsubsJ_02378 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321759|ref|ZP_03603053.1| hypothetical protein BsubsS_02389 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81818356|sp|P96576.1|YDAC_BACSU RecName: Full=Uncharacterized methyltransferase YdaC
 gi|1881229|dbj|BAA19256.1| ydaC [Bacillus subtilis]
 gi|2632718|emb|CAB12225.1| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 181

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   K  ++++G  E  P P 
Sbjct: 30  ILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAARRVKPKGVRLIQGSIETFPLPA 89

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +GI++ YR LK GGKA I         +    AD      K
Sbjct: 90  SFYDKVISVNNYTIWNDQTKGIKQIYRALKPGGKAAIT--------MQPREADASPEKTK 141

Query: 234 E--EEYIEWFQKAGFK--DVQLKRIGPK 257
               + I  F+ AGF+  D+Q K I P+
Sbjct: 142 SFGRQMIADFKAAGFEDIDIQFKNIKPE 169


>gi|313146137|ref|ZP_07808330.1| arsenite S-adenosylmethyltransferase [Bacteroides fragilis 3_1_12]
 gi|313134904|gb|EFR52264.1| arsenite S-adenosylmethyltransferase [Bacteroides fragilis 3_1_12]
          Length = 283

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           VVD+G G G         V ++  V  +D SP  + KA+    K      + +EGD E++
Sbjct: 92  VVDLGSGAGNDCFIARAEVGESGKVIGIDFSPQMITKARNNALKRGYVNVEFLEGDIENM 151

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   + AD  VS   +   P+     +E YRVLK GG  C I  V       + F D   
Sbjct: 152 PLLDNTADVVVSNCVLNLLPEKNIIFKEIYRVLKPGGHFC-ISDVVLNGTFPKKFTDNAA 210

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKR 253
           ++        ++E+Y++  +KA F D+++ R
Sbjct: 211 MYAGCIASAIQKEDYLQEIEKADFVDIRIAR 241


>gi|386757016|ref|YP_006230232.1| putative methyltransferase [Bacillus sp. JS]
 gi|384930298|gb|AFI26976.1| putative methyltransferase [Bacillus sp. JS]
          Length = 198

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    I+K     ++  +D S   L  A ++   K  +++EG  E  P   
Sbjct: 47  ILEVGFGPGYCMQQILKREKDVHLHGIDASEAMLKLAARRVKSKGVRLIEGSVETFPLSA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +G+++ YR LK GGKA I         +    AD      K
Sbjct: 107 SFYDKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAIT--------MQPREADASPEKTK 158

Query: 234 E--EEYIEWFQKAGFK--DVQLKRIGPK 257
              ++ I  F+ AGF+  D+Q K I P+
Sbjct: 159 SFGKQMIADFKAAGFEDIDIQFKNIRPE 186


>gi|424662640|ref|ZP_18099677.1| hypothetical protein HMPREF1205_03026 [Bacteroides fragilis HMW
           616]
 gi|404576330|gb|EKA81068.1| hypothetical protein HMPREF1205_03026 [Bacteroides fragilis HMW
           616]
          Length = 276

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           VVD+G G G         V ++  V  +D SP  + KA+    K      + +EGD E++
Sbjct: 85  VVDLGSGAGNDCFIARAEVGESGKVIGIDFSPQMITKARNNALKRGYVNVEFLEGDIENM 144

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   + AD  VS   +   P+     +E YRVLK GG  C I  V       + F D   
Sbjct: 145 PLLDNTADVVVSNCVLNLLPEKNIIFKEIYRVLKPGGHFC-ISDVVLNGTFPKKFTDNAA 203

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKR 253
           ++        ++E+Y++  +KA F D+++ R
Sbjct: 204 MYAGCIASAIQKEDYLQEIEKADFVDIRIAR 234


>gi|78188538|ref|YP_378876.1| ubiquinone/menaquinone biosynthesis methyltransferase [Chlorobium
           chlorochromatii CaD3]
 gi|78170737|gb|ABB27833.1| demethylmenaquinone methyltransferase [Chlorobium chlorochromatii
           CaD3]
          Length = 245

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K +    VT LD SP  L  A++K P       EG AE LPF  
Sbjct: 70  ILDVATGTGDLAASMAK-LSGATVTALDLSPEMLVIARKKYP--HITFHEGFAEQLPF-A 125

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           D +   VSAG  +  + +   G+RE  RVLK GG A II P+ P
Sbjct: 126 DGSFNIVSAGFGVRNFENLDAGMREFNRVLKTGGHALIIEPMIP 169


>gi|57640639|ref|YP_183117.1| SAM-dependent methyltransferase [Thermococcus kodakarensis KOD1]
 gi|57158963|dbj|BAD84893.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
           kodakarensis KOD1]
          Length = 209

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)

Query: 159 CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF 218
            +++EG AE+LPF  D  D  +   +I +  DP++ ++EAYRVLK GG A IIG V    
Sbjct: 77  IEVIEGTAENLPFEEDSMDYLLMVTTICFVDDPEKALKEAYRVLKPGG-ALIIGFVDRNS 135

Query: 219 WLSRYFAD--VWMLFPKE------EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMG 270
            + R++ +     +F KE      EE +E  +K GF++ ++ +           H L   
Sbjct: 136 PIGRFYEEHKNESVFYKEARFFSTEELLELLKKVGFREFEIVQ--------TLFHRLNEI 187

Query: 271 CSVTGVKPASGDSPLQV 287
            SV  VKP  G+    V
Sbjct: 188 KSVEPVKPGYGEGSFVV 204


>gi|444920389|ref|ZP_21240232.1| Malonyl-CoA O-methyltransferase BioC [Wohlfahrtiimonas
           chitiniclastica SH04]
 gi|444508708|gb|ELV08877.1| Malonyl-CoA O-methyltransferase BioC [Wohlfahrtiimonas
           chitiniclastica SH04]
          Length = 255

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 11/174 (6%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG 164
           A +S     V+D G GTG+ +  + K+  A +VT LD S   L +A  K    +   V+G
Sbjct: 40  AQVSLDQACVLDAGCGTGYISHAL-KNRGAAHVTALDLSDAMLTQAMLKASAHD--YVQG 96

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           D E LP P+D  D  +S+ ++++  D  R + E  RVLK GG+  +     PT       
Sbjct: 97  DIESLPLPSDAFDAVISSLAVQWCHDLPRALSELVRVLKPGGRLYVATLADPTL---HEL 153

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKP 278
              W      +  +++   A  +            R VR H      + +G+ P
Sbjct: 154 KKAWQAVDDAQHVVDFLPVANIESA-----AEGLGRTVRCHHYCEVLTFSGIFP 202


>gi|402828256|ref|ZP_10877147.1| methyltransferase domain protein [Slackia sp. CM382]
 gi|402286857|gb|EJU35319.1| methyltransferase domain protein [Slackia sp. CM382]
          Length = 208

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDL 169
            +D+G G G     +V+     +VT +D +P  + K++           C+IVEGD   L
Sbjct: 49  AIDIGCGGGANVARLVERCPRGSVTGVDYAPTSVDKSRSFNARAIAQGSCRIVEGDVMAL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW- 228
           PF     D   +  ++ +WPD +R + E  RVL+ GG   I   V  T    R  A  + 
Sbjct: 109 PFADASFDVATAFETVYFWPDIRRSLSEVARVLRRGGTFMISNEVDGTAESDREMAASFS 168

Query: 229 -MLFPKEEEYIEWFQKAGFKDVQLK 252
            M     ++     ++AGF  ++++
Sbjct: 169 GMSMYTGDDLAALLEEAGFDRIEVR 193


>gi|311103756|ref|YP_003976609.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310758445|gb|ADP13894.1| ubiE/COQ5 methyltransferase family protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 256

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           ++D+G G G  +  +  HV  K+VT  D S   L   A    K  L      +G AE LP
Sbjct: 48  LLDLGCGGGHVSFHVAPHV--KHVTAYDLSQQMLDVVAGEAAKRGLANLATCQGKAEYLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  RG+REA+RVLK GG A     V P
Sbjct: 106 FDDGEFDLVMSRYSTHHWQDAGRGLREAFRVLKPGGIAVFADVVSP 151


>gi|363421988|ref|ZP_09310069.1| type 11 methyltransferase [Rhodococcus pyridinivorans AK37]
 gi|359733549|gb|EHK82541.1| type 11 methyltransferase [Rhodococcus pyridinivorans AK37]
          Length = 263

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V DVG G G  T  +V  V A NV  +D +P   A  +Q  P  + ++  G AE+LP+P 
Sbjct: 37  VCDVGCGPGGLTRELVGRVGAANVAAIDPAPQFAAACRQIAPEIDVRV--GVAENLPWPD 94

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG--KACIIGPVYPTFWLSRYF-ADVWML 230
              D  +++  + +  DP+ G+RE  RV + GG   AC+         + R F A V  +
Sbjct: 95  GTFDVTLASLVLGFMNDPEVGVREMVRVTRPGGTVAACMWDTTAGGMTMLRIFWAAVGTV 154

Query: 231 FP-----------KEEEYIEWFQKAGFKDV 249
            P            E +  E F++AG  DV
Sbjct: 155 EPGSPGETRLAGTTEGDIAERFRRAGLDDV 184


>gi|392407726|ref|YP_006444334.1| methylase [Anaerobaculum mobile DSM 13181]
 gi|390620862|gb|AFM22009.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Anaerobaculum mobile DSM 13181]
          Length = 239

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE---CKIVEGDAED 168
           M ++D+G GTG  +L + +      VT +D S   LA A+QK  L+E    K  + D  D
Sbjct: 43  MEILDIGCGTGNLSLELARL--GARVTGVDISEPMLAIARQK-ALREKLDVKFYKADVHD 99

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           LPF  +  D  VS  ++E+  D    ++EAYRVLK GG+  +IG +      SRY+
Sbjct: 100 LPFDDETFDAVVSLSALEFVSDLIEALKEAYRVLKPGGR-LVIGIIGGNSVWSRYY 154


>gi|268326447|emb|CBH40035.1| conserved hypothetical protein, SAM-dependent methyltransferase
           type 11 family [uncultured archaeon]
          Length = 263

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 11/153 (7%)

Query: 84  YDHVINPGHWTEDMRDDA--LEPADLSNRNML-VVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           YD V  PGH +++    A  +E  ++   N   V+DVG GTGF +L +        VT +
Sbjct: 26  YDSV--PGHGSKEKEKRAWLMEFKNVFGENRKNVLDVGTGTGFLSLLLADF--GHEVTGI 81

Query: 141 DQSPHQLAKAKQKEPLKECKI--VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREA 198
           D S   L+ AK+K      KI    GDAE+LPF     D  V    +   P+P++ I E 
Sbjct: 82  DMSEGMLSVAKEKAHDMGLKIHFERGDAENLPFDGQTFDCVVCRHLLWTLPNPEKAISEW 141

Query: 199 YRVLKLGGKACIIGPVYPTFWLSRYFADV-WML 230
            RV K GGK  +I  V+    + RY + V W+L
Sbjct: 142 IRVTKQGGKIAVIDGVWDRG-IGRYLSRVGWIL 173


>gi|425442008|ref|ZP_18822268.1| putative methyltransferase [Microcystis aeruginosa PCC 9717]
 gi|389717105|emb|CCH98739.1| putative methyltransferase [Microcystis aeruginosa PCC 9717]
          Length = 262

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 20/190 (10%)

Query: 88  INPGHWTEDMRDDALEPADLS--------NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI 139
            N G+W    +D     + L         N+   ++DVG G G TT  ++K+     +  
Sbjct: 29  FNVGYWLSHTQDQQEASSTLMEKLLEFIPNKQGTILDVGCGLGATTHYLLKYYPLTAIVG 88

Query: 140 LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           ++ SP Q+A++    P  E K +  DA ++ F     ++ +   +  Y+   ++  +EA+
Sbjct: 89  INISPTQIARSLLNFP--EGKFLLMDAVEMDFADHSFEQIICVEAAFYFNTRRQFFQEAW 146

Query: 200 RVLKLGGKACIIGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLKRI 254
           RVLK GG   +    + T   +    D W +          EY   +Q+AGFKDVQ   +
Sbjct: 147 RVLKPGGTLILSDLSFAT---TELLGD-WTVPQANTVKDRAEYQNLYQQAGFKDVQFVEV 202

Query: 255 GPK-WYRGVR 263
             + W+R  R
Sbjct: 203 TEECWFRHFR 212


>gi|428307361|ref|YP_007144186.1| demethylmenaquinone methyltransferase [Crinalium epipsammum PCC
           9333]
 gi|428248896|gb|AFZ14676.1| demethylmenaquinone methyltransferase [Crinalium epipsammum PCC
           9333]
          Length = 234

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VD+  G+G  T  + K V  +  V  +D SP Q+A  K+K PL + + +E D  DLPFP 
Sbjct: 55  VDLCCGSGDLTKLLAKEVGGQGKVYGVDFSPQQMAIGKEKFPLPQIEWIEADVLDLPFPD 114

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           +  D       +    D  R ++E YRVLK G KA I+
Sbjct: 115 NNFDAATMGYGLRNVVDISRSLQEIYRVLKPGAKAAIL 152


>gi|17988577|ref|NP_541210.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis bv. 1 str. 16M]
 gi|62317892|ref|YP_223745.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269869|ref|YP_419160.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis biovar Abortus 2308]
 gi|189023142|ref|YP_001932883.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus S19]
 gi|225629513|ref|ZP_03787546.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           ceti str. Cudo]
 gi|225686818|ref|YP_002734790.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis ATCC 23457]
 gi|237817434|ref|ZP_04596426.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus str. 2308 A]
 gi|256015829|ref|YP_003105838.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           microti CCM 4915]
 gi|256262046|ref|ZP_05464578.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260545126|ref|ZP_05820947.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus NCTC 8038]
 gi|260565107|ref|ZP_05835592.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 1 str. 16M]
 gi|260756194|ref|ZP_05868542.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 6 str. 870]
 gi|260760437|ref|ZP_05872785.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 4 str. 292]
 gi|260763678|ref|ZP_05876010.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882018|ref|ZP_05893632.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 9 str. C68]
 gi|261216504|ref|ZP_05930785.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 3 str. Tulya]
 gi|261217649|ref|ZP_05931930.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti M13/05/1]
 gi|261220872|ref|ZP_05935153.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti B1/94]
 gi|261312884|ref|ZP_05952081.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis M163/99/10]
 gi|261318280|ref|ZP_05957477.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis B2/94]
 gi|261322715|ref|ZP_05961912.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella neotomae 5K33]
 gi|261757250|ref|ZP_06000959.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella sp. F5/99]
 gi|265986078|ref|ZP_06098635.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis M292/94/1]
 gi|265990351|ref|ZP_06102908.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265992538|ref|ZP_06105095.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 3 str. Ether]
 gi|265995772|ref|ZP_06108329.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti M490/95/1]
 gi|294854015|ref|ZP_06794687.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           NVSL 07-0026]
 gi|297249175|ref|ZP_06932876.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus bv. 5 str. B3196]
 gi|306846054|ref|ZP_07478620.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           inopinata BO1]
 gi|340792827|ref|YP_004758291.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           pinnipedialis B2/94]
 gi|376271563|ref|YP_005114608.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus A13334]
 gi|384213578|ref|YP_005602661.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis M5-90]
 gi|384410681|ref|YP_005599301.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis M28]
 gi|384447180|ref|YP_005661398.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis NI]
 gi|423168206|ref|ZP_17154908.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI435a]
 gi|423172359|ref|ZP_17159033.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI474]
 gi|423173910|ref|ZP_17160580.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI486]
 gi|423175786|ref|ZP_17162452.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI488]
 gi|423181788|ref|ZP_17168428.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI010]
 gi|423184921|ref|ZP_17171557.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI016]
 gi|423188074|ref|ZP_17174687.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI021]
 gi|423190492|ref|ZP_17177101.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI259]
 gi|48474570|sp|Q8YDE4.1|UBIE_BRUME RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|75495335|sp|Q576Q0.1|UBIE_BRUAB RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|123545661|sp|Q2YJM4.1|UBIE_BRUA2 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|254789903|sp|B2SC50.1|UBIE_BRUA1 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|254789904|sp|C0RMK3.1|UBIE_BRUMB RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|17984376|gb|AAL53474.1| ubiquinone/menaquinone biosynthesis methyltransferase ubie
           [Brucella melitensis bv. 1 str. 16M]
 gi|62198085|gb|AAX76384.1| UbiE [Brucella abortus bv. 1 str. 9-941]
 gi|82940143|emb|CAJ13192.1| SAM (and some other nucleotide) binding motif:Generic
           methyltransferase:UbiE/COQ5
           methyltransferase:Ubiquinone/menaquinone bi [Brucella
           melitensis biovar Abortus 2308]
 gi|189021716|gb|ACD74437.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus S19]
 gi|225616009|gb|EEH13058.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           ceti str. Cudo]
 gi|225642923|gb|ACO02836.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis ATCC 23457]
 gi|237788247|gb|EEP62463.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus str. 2308 A]
 gi|255998489|gb|ACU50176.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           microti CCM 4915]
 gi|260098397|gb|EEW82271.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus NCTC 8038]
 gi|260152750|gb|EEW87843.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 1 str. 16M]
 gi|260670755|gb|EEX57695.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 4 str. 292]
 gi|260674099|gb|EEX60920.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676302|gb|EEX63123.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 6 str. 870]
 gi|260871546|gb|EEX78615.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 9 str. C68]
 gi|260918111|gb|EEX84972.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 3 str. Tulya]
 gi|260919456|gb|EEX86109.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti B1/94]
 gi|260922738|gb|EEX89306.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti M13/05/1]
 gi|261297503|gb|EEY01000.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis B2/94]
 gi|261298695|gb|EEY02192.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella neotomae 5K33]
 gi|261301910|gb|EEY05407.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis M163/99/10]
 gi|261737234|gb|EEY25230.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella sp. F5/99]
 gi|262550069|gb|EEZ06230.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella ceti M490/95/1]
 gi|262763408|gb|EEZ09440.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 3 str. Ether]
 gi|263001020|gb|EEZ13710.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263091737|gb|EEZ16068.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella melitensis bv. 2 str. 63/9]
 gi|264658275|gb|EEZ28536.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella pinnipedialis M292/94/1]
 gi|294819670|gb|EFG36670.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           NVSL 07-0026]
 gi|297173044|gb|EFH32408.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus bv. 5 str. B3196]
 gi|306273543|gb|EFM55394.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           inopinata BO1]
 gi|326411228|gb|ADZ68292.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis M28]
 gi|326554518|gb|ADZ89157.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis M5-90]
 gi|340561286|gb|AEK56523.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           pinnipedialis B2/94]
 gi|349745177|gb|AEQ10719.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           melitensis NI]
 gi|363402735|gb|AEW19704.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           abortus A13334]
 gi|374536781|gb|EHR08301.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI474]
 gi|374538699|gb|EHR10206.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI435a]
 gi|374539911|gb|EHR11413.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI486]
 gi|374546378|gb|EHR17838.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI010]
 gi|374547221|gb|EHR18680.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI016]
 gi|374554254|gb|EHR25667.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI021]
 gi|374556532|gb|EHR27937.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI259]
 gi|374556586|gb|EHR27990.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella abortus bv. 1 str. NI488]
          Length = 269

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  VY   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|392426411|ref|YP_006467405.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfosporosinus acidiphilus SJ4]
 gi|391356374|gb|AFM42073.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfosporosinus acidiphilus SJ4]
          Length = 241

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 31/171 (18%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKN-VTILDQSPHQLAKAKQKEP----LKECKIVEGD 165
            M ++DV  GTG  ++ + K V +K  VT LD S   L  A+Q       +   + ++GD
Sbjct: 51  GMSILDVCCGTGQFSMELGKTVGSKGKVTGLDFSQKMLDVARQTLAETPDMHWIEFMQGD 110

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF------- 218
           A +LPFP +  D       +   PD ++GIRE  RV+K GGK   +    P+F       
Sbjct: 111 AMELPFPDNSFDGVTVGWGLRNLPDLRKGIREMARVVKPGGKVVSLDMAKPSFPGFKQVY 170

Query: 219 WL-------------------SRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           WL                    +Y  D  + FP ++E ++ F + G ++ +
Sbjct: 171 WLYFEKLIPLMGQIWAKKASAYQYLHDSALEFPAQQELVKIFAECGLENTK 221


>gi|292670326|ref|ZP_06603752.1| UbiE/COQ5 family methyltransferase [Selenomonas noxia ATCC 43541]
 gi|422344529|ref|ZP_16425454.1| hypothetical protein HMPREF9432_01514 [Selenomonas noxia F0398]
 gi|292648057|gb|EFF66029.1| UbiE/COQ5 family methyltransferase [Selenomonas noxia ATCC 43541]
 gi|355376598|gb|EHG23840.1| hypothetical protein HMPREF9432_01514 [Selenomonas noxia F0398]
          Length = 216

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ-KEPLKEC---KIVEGDAED 168
           +V+D+G G G T   + + V   ++  +D +   +  ++    PL E    +I+    E 
Sbjct: 55  IVLDIGCGGGNTLARMAECVTQGHLVGIDYAETSVEASRAFNAPLIEAGRMEILHASVEA 114

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY----F 224
           LPF   + D  V+  S  +WP+P   ++E  RVLK GG   ++  VY    L +      
Sbjct: 115 LPFDDVHFDEIVTVESFYFWPNPAESLKEVARVLKPGGTFLLLAEVYGRDDLPQSIREKI 174

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           A   +  P  EE+   F+ AGF++V +
Sbjct: 175 AGYQLTNPTPEEFERLFRAAGFQEVHM 201


>gi|332299300|ref|YP_004441221.1| type 11 methyltransferase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176363|gb|AEE12053.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707]
          Length = 231

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 86  HVINPGHWTEDMRDDALE-----PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           H+   G W  D    A E     P D   R   ++DV  GT   T    K +    +T L
Sbjct: 38  HLFMNGLWQVDQLQMAAEVLAMIPDDFVGR---LLDVPVGTAVFTCDKYKQLAKAQITAL 94

Query: 141 DQSPHQLAKAKQK---EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
           D S   L  A  +   E +    +V+GD   +PF     D  ++   ++ +PD +R +RE
Sbjct: 95  DYSEKMLEIAAHRFEAEGVTNVSLVQGDVGTMPFADGEFDYLLTMSGLQAFPDKERALRE 154

Query: 198 AYRVLKLGGKAC 209
            +RVLK GG+ C
Sbjct: 155 MHRVLKPGGRLC 166


>gi|315657387|ref|ZP_07910269.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315491859|gb|EFU81468.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 230

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 30/167 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DV  GTG +++  V+      V  +D S   +A+ +++ P  E    +GDA +L FP 
Sbjct: 54  VLDVAAGTGASSIEFVR--AGAKVVAVDFSEGMIAEGRRRHP--EIDFQQGDAMNLDFPD 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWLSR-- 222
           +  D    +  +    DP + +RE YRV++ GG   +     PT         F+L R  
Sbjct: 110 NTFDCVTISFGLRNVSDPDQALREFYRVVRPGGHVVVCEFSRPTFGPFRAIYRFFLHRVM 169

Query: 223 ---------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          Y A+  + +P + ++    + AGF+ +QLK +
Sbjct: 170 PPIARLFSTDAVAYDYLAESILAWPSQYQFAAHLRAAGFERLQLKNL 216


>gi|315654693|ref|ZP_07907599.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii ATCC 51333]
 gi|315491157|gb|EFU80776.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii ATCC 51333]
          Length = 230

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 30/167 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DV  GTG +++  V+      V  +D S   +A+ +++ P  E    +GDA +L FP 
Sbjct: 54  VLDVAAGTGASSIEFVR--AGAKVVAVDFSEGMIAEGRRRHP--EIDFQQGDAMNLDFPD 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWLSR-- 222
           +  D    +  +    DP + +RE YRV++ GG   +     PT         F+L R  
Sbjct: 110 NTFDCVTISFGLRNVSDPDQALREFYRVVRPGGHVVVCEFSRPTFAPFRAIYRFFLHRVM 169

Query: 223 ---------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          Y A+  + +P + ++    + AGF+ +QLK +
Sbjct: 170 PPIARLFSTDAVAYDYLAESILAWPSQYQFAAHLRAAGFERLQLKNL 216


>gi|121534279|ref|ZP_01666103.1| Methyltransferase type 11 [Thermosinus carboxydivorans Nor1]
 gi|121307049|gb|EAX47967.1| Methyltransferase type 11 [Thermosinus carboxydivorans Nor1]
          Length = 229

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDA 166
            ++M V DVG GTG  T           V  +D SP  LA A +K          V  DA
Sbjct: 38  QQDMYVADVGCGTGIYTNEFC--AAGARVVGIDISPEMLAIAAEKNKTWGNRVSFVTADA 95

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
             LPFP +  D  VS  ++E++ +P+R + E +R+L+ GG+  +
Sbjct: 96  AALPFPDNAFDMVVSITAMEFFEEPRRCLHEMHRILRPGGRMIV 139


>gi|51892023|ref|YP_074714.1| methyl transferase [Symbiobacterium thermophilum IAM 14863]
 gi|51855712|dbj|BAD39870.1| putative methyl transferase [Symbiobacterium thermophilum IAM
           14863]
          Length = 279

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 16/134 (11%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTG-----FTTLGIVKHVDAKNVTILDQSPH 145
           GH T +     L P ++  R   V+D+G G G     + TLG+      K +  +D  PH
Sbjct: 40  GHLTLEHYRPFLSPEEIM-RGKTVLDIGSGAGGKTLYYATLGV------KKIYGVDVVPH 92

Query: 146 ----QLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRV 201
                 A A +K      + +  DA  LPFP D+ D  ++   +E+   P+  +REAYRV
Sbjct: 93  YEHEARALAAEKNLSDRAEFLTADATALPFPDDHFDVIIANDVMEHVAQPEAVLREAYRV 152

Query: 202 LKLGGKACIIGPVY 215
           LK GG+     P Y
Sbjct: 153 LKPGGRFFTNFPPY 166


>gi|405377494|ref|ZP_11031435.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF142]
 gi|397325931|gb|EJJ30255.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CF142]
          Length = 258

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     I++  + + + T+LD +   L     +A++K+       VE +AED
Sbjct: 74  VLDVAGGTGDIAFRIIEASNRQAHATVLDINGSMLGVGAERAEKKKLSDNLTFVEANAED 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF  +  D Y  A  I   P  +  + EAYRVLK GG+  +          +  VY   
Sbjct: 134 LPFEANSFDAYTIAFGIRNVPRIEVALSEAYRVLKRGGRLLVLEFSEVELPLLDKVYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    + AGF  V
Sbjct: 194 SFNAIPKFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRTAGFSRV 240


>gi|294494844|ref|YP_003541337.1| methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
 gi|292665843|gb|ADE35692.1| Methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
          Length = 217

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKI-VEGDAEDLP 170
           +DVG G     + + + VD K V  +D S   LA AK+K     L E  I + GD  D+P
Sbjct: 50  IDVGSGPASLAIALGEIVDGK-VYAMDFSEKMLAIAKRKIESFDLNENVIPIFGDVHDMP 108

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           F   +AD  VS GS+ +W +     RE YRVLK GG A I G
Sbjct: 109 FEDCFADLIVSRGSLFFWQNVPEAFREIYRVLKSGGMAYIGG 150


>gi|324520518|gb|ADY47654.1| Ubiquinone biosynthesis methyltransferase coq-5 [Ascaris suum]
          Length = 289

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 50/208 (24%)

Query: 110 RNMLVVDVGGGTGFTTLGIV----KHVDAKNVTILDQSPHQL----AKAKQKEPLKECKI 161
           RN  ++DV GGTG      V    K + + +VTI D + + L     +A +   + + ++
Sbjct: 93  RNTTLLDVAGGTGDIAFRAVRKIQKGISSGSVTICDINQNMLDVGQMRADKDRSIDKSRL 152

Query: 162 --VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC--------- 209
             + GDAE LPF  +  D Y  A  I       + ++EAYRVL+ GGK AC         
Sbjct: 153 KWICGDAESLPFKENSFDLYTIAFGIRNCTHVDKVLQEAYRVLRPGGKFACLEFSEIASP 212

Query: 210 --------------IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                         ++G V    + S RY  +    FPK+ E+ +  + A F +      
Sbjct: 213 LRRFYDFYSFQIIPVMGQVIAGDYNSYRYLVESIRKFPKQVEFSKMIEDAKFTE------ 266

Query: 255 GPKWYRGVRRHGLIMG-CSV-TGVKPAS 280
                  VR   L  G C++ TG+KP S
Sbjct: 267 -------VRYENLSFGICAIHTGIKPIS 287


>gi|357058968|ref|ZP_09119814.1| hypothetical protein HMPREF9334_01531 [Selenomonas infelix ATCC
           43532]
 gi|355373314|gb|EHG20635.1| hypothetical protein HMPREF9334_01531 [Selenomonas infelix ATCC
           43532]
          Length = 208

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECKIVEGDA 166
           N  V+D G G G      ++ VD  +VT LD S   +AKA++          C+IV+G+ 
Sbjct: 46  NEQVLDCGCGGGANVAVFLRMVDEGHVTGLDYSTVSVAKAREVNRAAIDAGRCEIVQGNV 105

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            +LPF     D   +  ++ +WP+  R   E YRVLK GG
Sbjct: 106 LELPFDDGRFDVVTAFETVYFWPEIARCFTEVYRVLKAGG 145


>gi|410463508|ref|ZP_11317019.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfovibrio magneticus str. Maddingley MBC34]
 gi|409983362|gb|EKO39740.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfovibrio magneticus str. Maddingley MBC34]
          Length = 310

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 102 LEPADL-----SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
           L+PA L       R     D+G G G     + +H  A  V  +D SP  LA A+++   
Sbjct: 136 LDPAALVREVMPERMAAAADLGCGPGDLLPVLAEHASA--VIGVDSSPSMLALAERRTAG 193

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-PVY 215
               +  G+ E LP     A   V   ++ + PDP   + EA RVL   G+  +I    +
Sbjct: 194 LPVSVRMGELEHLPMADGEAAFAVICLTLHHLPDPAAALAEARRVLAPDGRLVVIDFAPH 253

Query: 216 PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
               + R F D W+ F + E+ +EW  +AGF   Q
Sbjct: 254 EDEAMRRRFGDRWLGFSR-EKLVEWLHRAGFDLAQ 287


>gi|410457588|ref|ZP_11311382.1| methyltransferase [Bacillus azotoformans LMG 9581]
 gi|409934201|gb|EKN71116.1| methyltransferase [Bacillus azotoformans LMG 9581]
          Length = 224

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 13/152 (8%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK--QKEPLKECKIVEGDA 166
           N N  ++DVG GTG T   +  H  AK VT +D +P  + KAK   K+     ++++G  
Sbjct: 24  NSNSHILDVGCGTGQTAAYLAAHYGAK-VTAMDINPIMIEKAKSRMKQYQLPVEVIQGSI 82

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-----ACIIGPVYPTF--W 219
           ED P   +  D  +S   + +   P R ++E +R+LK GG+       I  P+ P+    
Sbjct: 83  EDFPLKDNTFDFILSESVLSFVNKP-RALKEIFRLLKNGGRFIANELTINKPLNPSNEKE 141

Query: 220 LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           + +++    +L   E +++  F++ GFK++++
Sbjct: 142 IKQFYGLDSLL--GETDWVALFEQTGFKNIKV 171


>gi|350631396|gb|EHA19767.1| hypothetical protein ASPNIDRAFT_52996 [Aspergillus niger ATCC 1015]
          Length = 315

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + R   ++D+ GGTG     ++ H    N      VTI D +P  LA+ +++      
Sbjct: 109 DTAGRGWNILDIAGGTGDIAFRMLDHATNINNDHETRVTIADINPDMLAEGQKRSVQTPY 168

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   ++G+A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 169 YNTNRLSFMQGNAQSMPSIPDNSVDLYTVVFGIRNFTDKQAALNEAFRVLKPGGVFACME 228

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 229 FSKVDNALFNAVYKQWSFSAIPMIGQLVAGDRDSYQYLVESIEQFPSQEEFRGMIQKAGF 288


>gi|390934036|ref|YP_006391541.1| type 11 methyltransferase [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
 gi|389569537|gb|AFK85942.1| Methyltransferase type 11 [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
          Length = 209

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 20/152 (13%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKA---KQKEPLKECKIVEGDAEDL 169
           V+D+G G G   L   K +  K + + LD +   + +A   ++K  +K  + V GD E++
Sbjct: 39  VLDLGCGRGNDVLNAAKIIGEKAIAVGLDLTERMIEEAEKNRKKLNVKNAEFVVGDVENI 98

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-----------PTF 218
           P  ++  D  +S   I +  D ++  +E YRVLK GG+  +   V            P  
Sbjct: 99  PLQSEKFDVVISDCVINHAKDKEKVYKEIYRVLKTGGRFVVSDVVSKDRLPDEIVNDPEA 158

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           W     AD +     EEEYI+    AGFK+++
Sbjct: 159 W-----ADCFGGAIPEEEYIKAINNAGFKEIE 185


>gi|321314091|ref|YP_004206378.1| putative methyltransferase [Bacillus subtilis BSn5]
 gi|320020365|gb|ADV95351.1| putative methyltransferase [Bacillus subtilis BSn5]
          Length = 198

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 16/169 (9%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
             WT D  D          R   +++VG G G+    ++K     ++  +D S   L  A
Sbjct: 32  NQWTIDQLD--------ITRGDSILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLA 83

Query: 151 KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            ++   K  ++++G  E  P P  + D+ +S  +   W D  +G+++ YR LK GGKA I
Sbjct: 84  ARRVKPKGVRLIQGSIETFPLPASFYDKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAI 143

Query: 211 IGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK--DVQLKRIGPK 257
                 T       A          + I  F+ AGF+  D+Q K I P+
Sbjct: 144 ------TMQPREADASPEKTKSFGRQMIADFKAAGFEDIDIQFKNIKPE 186


>gi|428277869|ref|YP_005559604.1| hypothetical protein BSNT_00731 [Bacillus subtilis subsp. natto
           BEST195]
 gi|291482826|dbj|BAI83901.1| hypothetical protein BSNT_00731 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 198

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   K  ++++G  E  P P 
Sbjct: 47  ILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAARRVKPKGVRLIQGSIETFPLPA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +G+++ YR LK GGKA I      T       A        
Sbjct: 107 SFYDKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAI------TMQPREADASPEKTKSF 160

Query: 234 EEEYIEWFQKAGFK--DVQLKRIGPK 257
             + I  F+ AGF+  D+Q K I P+
Sbjct: 161 GRQMIADFKAAGFEDIDIQFKNIKPE 186


>gi|223940890|ref|ZP_03632714.1| Methyltransferase type 11 [bacterium Ellin514]
 gi|223890442|gb|EEF56979.1| Methyltransferase type 11 [bacterium Ellin514]
          Length = 291

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAED 168
           + V D+G G G   L  +  + AK V  +D S   +   A   +K  LK  +   GD E+
Sbjct: 129 LTVADLGSGEGL--LSELLALKAKKVIAVDNSERIIEFGANKAKKNGLKNLEFRLGDLEN 186

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS-RYFADV 227
            P      D  + + ++ +  +P + I+ AY++LK GG   I+  +   F  +   + D 
Sbjct: 187 PPIDPHSVDLVILSQALHHAAEPAKAIQSAYKILKPGGHIWILDLLKHNFEKAHELYGDR 246

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQL 251
           W+ FP E +   W + AGFK +++
Sbjct: 247 WLGFP-ESDMHHWLEAAGFKKIEI 269


>gi|145244361|ref|XP_001394637.1| ubiquinone biosynthesis methyltransferase coq5 [Aspergillus niger
           CBS 513.88]
 gi|134079327|emb|CAK96956.1| unnamed protein product [Aspergillus niger]
          Length = 315

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + R   ++D+ GGTG     ++ H    N      VTI D +P  LA+ +++      
Sbjct: 109 DTAGRGWNILDIAGGTGDIAFRMLDHATNINNDHETRVTIADINPDMLAEGQKRSVQTPY 168

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   ++G+A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 169 YNTNRLSFMQGNAQSMPSIPDNSVDLYTVVFGIRNFTDKQAALNEAFRVLKPGGVFACME 228

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 229 FSKVDNALFNAVYKQWSFSAIPMIGQLVAGDRDSYQYLVESIEQFPSQEEFRGMIQKAGF 288


>gi|374855625|dbj|BAL58480.1| methyltransferase type 11 [uncultured candidate division OP1
           bacterium]
          Length = 256

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 16/143 (11%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA 134
           WF R LS          H    M D  ++ A++  ++  V+DV  GTG  +  +  H  A
Sbjct: 19  WFRRELS---------AH-ERAMLDQIVQLAEIRPKDR-VLDVACGTGLVSFALAPH--A 65

Query: 135 KNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
           + V  +D SP  LAKA++   +  ++      G AE LPF     D  V   +I ++  P
Sbjct: 66  REVVGIDISPGMLAKAREIRHRRAVRHVHFTLGKAEHLPFQDGEFDAVVCRLAIHHFAQP 125

Query: 192 QRGIREAYRVLKLGGKACIIGPV 214
           +R I E  RVLK GG+  I   V
Sbjct: 126 EREIGEMARVLKAGGRLVISDTV 148


>gi|226289507|gb|EEH45011.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Paracoccidioides brasiliensis Pb18]
          Length = 324

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  LA+ K++              
Sbjct: 118 ILDVAGGTGDIAFRMLDHATNINNDHNTRVTIADINPDMLAEGKKRSLETPYYNTDRLAF 177

Query: 162 VEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           ++G+AE +P  P +  D Y  A  I  + D Q  + EA+RVLK GG  AC         +
Sbjct: 178 MQGNAESMPTIPDNSIDMYTVAFGIRNFTDKQAALNEAFRVLKPGGVFACLEFSKVTNGL 237

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
           +   Y  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 238 VDEGYKLWSFSAIPLIGQLVAGDRASYQYLVESIEKFPSQEEFRRMIQKAGF 289


>gi|383772392|ref|YP_005451458.1| type 11 methyltransferase [Bradyrhizobium sp. S23321]
 gi|381360516|dbj|BAL77346.1| methyltransferase type 11 [Bradyrhizobium sp. S23321]
          Length = 262

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 115 VDVGGGTG-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VDVG G G FT L + K   A +V  +D S  Q+  A+QK P  + ++  GDA  LP+  
Sbjct: 43  VDVGAGNGAFTELILAKSAPA-SVCAIDPSDAQIETARQKLPANQVELSIGDAMALPYEP 101

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           +  D  V A  + + PDP++G+ E  RV K GG
Sbjct: 102 NRFDVAVMALVLFFVPDPRKGVSEMLRVTKPGG 134


>gi|313887339|ref|ZP_07821030.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923258|gb|EFR34076.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 231

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 86  HVINPGHWTEDMRDDALE-----PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           H+   G W  D    A E     P D   R   ++DV  GT   T    K +    +T L
Sbjct: 38  HLFMNGLWQVDQLQMAAEVLAMIPDDFVGR---LLDVPVGTAVFTCDKYKQLAKAQITAL 94

Query: 141 DQSPHQLAKAKQK---EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
           D S   L  A  +   E +    +V+GD   +PF     D  ++   ++ +PD +R +RE
Sbjct: 95  DYSEKMLEIAAHRFEAEGVTNVSLVQGDVGAMPFADGEFDYLLTMSGLQAFPDKERALRE 154

Query: 198 AYRVLKLGGKAC 209
            +RVLK GG+ C
Sbjct: 155 MHRVLKPGGRLC 166


>gi|422006664|ref|ZP_16353653.1| hypothetical protein OOC_00850 [Providencia rettgeri Dmel1]
 gi|414098880|gb|EKT60525.1| hypothetical protein OOC_00850 [Providencia rettgeri Dmel1]
          Length = 253

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G   F    +VK V A +++  D   + +A   Q+  L      +G AE LP
Sbjct: 46  VLDLGCGAGHVSFHAAPLVKSVTAYDLS--DSMLNVVANNAQERELNNITTCKGTAESLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     DR +S  S  +W D ++ +RE  RVLK GGK   I  V P
Sbjct: 104 FGDHCFDRVISRYSAHHWHDVEQALREVRRVLKPGGKGIFIDVVSP 149


>gi|148557874|ref|YP_001257973.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           ovis ATCC 25840]
 gi|148369159|gb|ABQ62031.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Brucella ovis ATCC 25840]
          Length = 247

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 64  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 123

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  VY   W
Sbjct: 124 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDE-W 182

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 183 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 232


>gi|327348598|gb|EGE77455.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 315

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  LA+ K++              
Sbjct: 116 ILDVAGGTGDIAFRMLDHATNINNDHKTRVTIADINPDMLAEGKKRSLETPYYNTDRLSF 175

Query: 162 VEGDAEDLPF-PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
           ++G+AE +P  P +  D Y  A  I  + D Q  + EA+RVLK GG  AC+         
Sbjct: 176 MQGNAESIPMIPDNSIDLYTVAFGIRNFTDKQAALNEAFRVLKPGGVFACLEFSKVTNGM 235

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 236 FDQVYKQWSFSAIPLIGHLVAGDRSSYQYLVESIEKFPSQEEFRGMIQKAGF 287


>gi|119716274|ref|YP_923239.1| type 11 methyltransferase [Nocardioides sp. JS614]
 gi|119536935|gb|ABL81552.1| Methyltransferase type 11 [Nocardioides sp. JS614]
          Length = 249

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
           G ++E + D  +E A +  R    VDVG G G  T  +V+ + A+ V  +D SP  +A A
Sbjct: 15  GRYSEPLADQLVELAGV-RRGQRAVDVGCGPGVLTSRLVERLGAEQVRAVDPSPPFVAAA 73

Query: 151 KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK--- 207
           + + P  + +   G AE LPF  D AD  ++   + +  DP  G+RE  RV  L G    
Sbjct: 74  RARCPGVDVR--PGTAEQLPFADDSADVVLANLVVHFMSDPVGGLREMGRVGGLVGATVW 131

Query: 208 --ACIIGPVYPTFW 219
             A   GP+  TFW
Sbjct: 132 NHATTAGPLS-TFW 144


>gi|427731310|ref|YP_007077547.1| methylase [Nostoc sp. PCC 7524]
 gi|427367229|gb|AFY49950.1| methylase involved in ubiquinone/menaquinone biosynthesis [Nostoc
           sp. PCC 7524]
          Length = 281

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKI--VEGDAEDLP 170
           V+D G G G T   +        +T L+  P QLA+A+++ +P    +I  ++GDA  LP
Sbjct: 75  VLDCGCGFGGTIASLSDRFSNMQLTGLNIDPRQLARAREQVQPRNHNQIEFIQGDACQLP 134

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           F  +  D  ++   I ++P  QR  +EA+RVLK GGK  I
Sbjct: 135 FADNSFDLVLAVECIFHFPSRQRFFQEAWRVLKPGGKLAI 174


>gi|315924588|ref|ZP_07920807.1| UbiE/COQ5 family methyltransferase [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622118|gb|EFV02080.1| UbiE/COQ5 family methyltransferase [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 211

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA----KQKEPLKECKIVEGDAEDL 169
           V+DVG G G     + + V   ++T +D S   +AKA    ++        IV G    L
Sbjct: 51  VLDVGCGGGACLHRMAEQVTGGHLTGVDYSDVSVAKATAYNQEAVDAGRMDIVAGSVSAL 110

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR----YFA 225
           PF  D+ D+ V+  S  +WP  +  +RE  RVLK GG   ++  +Y    L +      A
Sbjct: 111 PFEDDHFDKIVTIESYYFWPALETDVREVRRVLKPGGHFLLVAEIYDHPGLPQPVLDNIA 170

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQL 251
           +  M     + +++ F+ AGF D+ +
Sbjct: 171 EYQMRNLSLDGFVDLFKIAGFADLSI 196


>gi|265984893|ref|ZP_06097628.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella sp. 83/13]
 gi|306837580|ref|ZP_07470452.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           NF 2653]
 gi|264663485|gb|EEZ33746.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella sp. 83/13]
 gi|306407364|gb|EFM63571.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella sp.
           NF 2653]
          Length = 269

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  +Y   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKIYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|404442676|ref|ZP_11007853.1| type 11 methyltransferase [Mycobacterium vaccae ATCC 25954]
 gi|403656703|gb|EJZ11504.1| type 11 methyltransferase [Mycobacterium vaccae ATCC 25954]
          Length = 236

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 3/150 (2%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +DVG G G  T  + + V    + + +D S   LA+A   E       +  DA+ LPF  
Sbjct: 84  LDVGSGPGNVTAALGRAVGPGGLALGVDISEPMLARAVSAEAGPNVGFLRADAQHLPFRD 143

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-PTFWLSRYFADVWMLFP 232
           +  D  VS   ++  PDP   + E  RVL+ G +  ++ P   P   L RY         
Sbjct: 144 ESFDAVVSIAMLQLIPDPATALAEMVRVLRSGRRMAVMVPTAGPAANLLRYLPTAGAHSF 203

Query: 233 KEEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
            ++E  +  +  G   V+ K IG  +W RG
Sbjct: 204 GDDELGDTLEGLGLVSVRTKSIGTVQWVRG 233


>gi|333383238|ref|ZP_08474900.1| hypothetical protein HMPREF9455_03066 [Dysgonomonas gadei ATCC
           BAA-286]
 gi|332828070|gb|EGK00792.1| hypothetical protein HMPREF9455_03066 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 269

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           V+D+G G G         V +   V  +D S   + KA++   K      + +EGD E++
Sbjct: 81  VLDLGSGAGNDCFIARAEVGETGRVIGIDFSLQMIEKARKNATKRGYTNVEFIEGDIENM 140

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----IGPVYPTFWL--SRY 223
           P P    D  VS   +   P+  +  +E YRVLK GG  CI    +  V+P  +   +  
Sbjct: 141 PLPDSSIDVVVSNCVLNLLPEKNKIFKEIYRVLKEGGHFCISDVVLNGVFPKEFTDNASM 200

Query: 224 FADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           +A       + E+Y+   +KA F D++++R
Sbjct: 201 YAGCIASAIQREDYLGEIEKADFSDIKIER 230


>gi|114327271|ref|YP_744428.1| SAM-dependent methyltransferase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315445|gb|ABI61505.1| SAM-dependent methyltransferase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 261

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 15/118 (12%)

Query: 100 DALEPADLSNRNMLVVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP- 155
           D LEP     R  +++D+G G G   FT   +++HV A      D SP  L  A  +   
Sbjct: 41  DVLEP----YRGGVMLDLGCGGGHVSFTAAPLMQHVVA-----CDLSPRMLEAAGAEAAR 91

Query: 156 --LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
             L   + V G AE LPF   + D   S  S  +WPD + G+R+AYRVLK GG A  +
Sbjct: 92  RGLHHIETVSGTAEALPFADHHFDVVASRYSAHHWPDFEAGLRQAYRVLKPGGLAVFM 149


>gi|15604523|ref|NP_221041.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Madrid E]
 gi|3861217|emb|CAA15117.1| UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE)
           [Rickettsia prowazekii str. Madrid E]
          Length = 265

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK--NVTIL--DQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K    +  N++++  D +   L  AK+K       +  K
Sbjct: 73  NLNSNILDVASGSGDIALKLAKKAKDRGNNISLILSDINEEMLNNAKKKSIDLNLFQNIK 132

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKAC---------I 210
            +  +AE+LPF  +  D Y  A  I   PD  + ++EAYRVLK +G   C         I
Sbjct: 133 FIVANAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFVCLEFSKVKEGI 192

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++++    +++GF++V  K +
Sbjct: 193 LKDFYKFYSFNIIPSIGQIIAGNKEAYEYLVESIALFPSQDDFRIMIKESGFEEVHYKNL 252

Query: 255 G 255
            
Sbjct: 253 S 253


>gi|398309520|ref|ZP_10512994.1| methyltransferase [Bacillus mojavensis RO-H-1]
          Length = 198

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K   + ++  LD S   L  A  +      ++++G  E  P P 
Sbjct: 47  ILEVGFGPGYCMKQMLKREKSVHIHGLDVSEAMLKLAAHRLKTDRVRLIQGSIETFPLPA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            Y D+ +S  +   W + Q GI++ Y+ LK GGKA I
Sbjct: 107 AYYDKVISVNNYTIWNNQQEGIKQIYQALKPGGKAAI 143


>gi|383486668|ref|YP_005404348.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. GvV257]
 gi|383500739|ref|YP_005414099.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. RpGvF24]
 gi|380757033|gb|AFE52270.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. GvV257]
 gi|380758436|gb|AFE53672.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. RpGvF24]
          Length = 248

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK--NVTIL--DQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K    +  N++++  D +   L  AK+K       +  K
Sbjct: 56  NLNSNILDVASGSGDIALKLAKKAKDRGNNISLILSDINEEMLNNAKKKSIDLNLFQNIK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKAC---------I 210
            +  +AE+LPF  +  D Y  A  I   PD  + ++EAYRVLK +G   C         I
Sbjct: 116 FIVANAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFVCLEFSKVKEGI 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++++    +++GF++V  K +
Sbjct: 176 LKDFYKFYSFNIIPSIGQIIAGNKEAYEYLVESIALFPSQDDFRIMIKESGFEEVHYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|417858702|ref|ZP_12503759.1| menaquinone biosynthesis methyltransferase ubiE [Agrobacterium
           tumefaciens F2]
 gi|338824706|gb|EGP58673.1| menaquinone biosynthesis methyltransferase ubiE [Agrobacterium
           tumefaciens F2]
          Length = 247

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 63  VLDVAGGTGDIAFRIVEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 122

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  +          +  VY  +
Sbjct: 123 LPFEANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRVYDAW 182

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 183 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFAAMIRTAGFSRV 229


>gi|345023570|ref|ZP_08787183.1| hypothetical protein OTW25_20049 [Ornithinibacillus scapharcae
           TW25]
          Length = 201

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 103 EPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECK 160
           E  DL  +  +++++G G G T   IVK VD  + T +D S   L +A+ K  LK  E  
Sbjct: 38  EVMDLKGK-AVILEIGIGNGATLHEIVKTVDIGSATGIDISNEMLKQAR-KRNLKYIEQG 95

Query: 161 IVE---GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           ++E   GD  DLPF     D+  S  +I +W D  R   E +RVLK GGK  I
Sbjct: 96  LMELRYGDVMDLPFEDIIFDKVFSIHTIYFWIDLNRSFSEIHRVLKPGGKVYI 148


>gi|257070154|ref|YP_003156409.1| ubiquinone/menaquinone biosynthesis methylase [Brachybacterium
           faecium DSM 4810]
 gi|256560972|gb|ACU86819.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Brachybacterium faecium DSM 4810]
          Length = 272

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 17/157 (10%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAE 167
            M ++DVG G G  T G+ + V   +VT L+ S    A  +    ++ L E ++V GDA 
Sbjct: 42  GMELLDVGSGAGTITAGLARLVGPAHVTALEVSEEAAALTRAELGRQGLGEVEVVVGDAH 101

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF--WLSRYFA 225
            LPF     D   +   +++ P P R + E  RV + GG   +    Y  F  W  R   
Sbjct: 102 HLPFADGSVDVVHAHQVLQHVPGPVRALAEFRRVTRPGGTVAVRDSDYEGFRWWPERPGI 161

Query: 226 DVWMLF------------PKEEEYIEWFQKAGFKDVQ 250
           + W+                    + W  +AGF DV+
Sbjct: 162 ERWLALYLRAARANGGTPDAGRRLLAWAHEAGFTDVE 198


>gi|167760210|ref|ZP_02432337.1| hypothetical protein CLOSCI_02583 [Clostridium scindens ATCC 35704]
 gi|167662093|gb|EDS06223.1| methyltransferase domain protein [Clostridium scindens ATCC 35704]
          Length = 202

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +D+G GTG     I++    K +  +D S   L  AK K P ++ K++ GD+E LPFP +
Sbjct: 48  LDLGCGTGEMLKLILQEDIGKELYGIDLSEQMLHVAKSKLP-EQVKLLLGDSEALPFPDN 106

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK----AC---IIGPVYPTFWLSRYFADV 227
             D      S  ++P+P   +RE +RVLK GG      C   ++G +   F++ R+  + 
Sbjct: 107 TFDVVYCNDSFHHYPEPMNVLREVHRVLKPGGTFLMGDCWQPLVGRIIMNFYM-RHSKEG 165

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
            +    E E +    +  F++V  ++IG
Sbjct: 166 DVKIYSEAEIVSMLSEY-FRNVSWEQIG 192


>gi|49473720|ref|YP_031762.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           quintana str. Toulouse]
 gi|61217248|sp|Q6G1I2.1|UBIE_BARQU RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|49239223|emb|CAF25543.1| Ubiquinone/menaquinone biosynthesis [Bartonella quintana str.
           Toulouse]
          Length = 260

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 37/186 (19%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE------ 154
           L P  LSN    V+DV GGTG     I+     K + T+LD +   L+  K++       
Sbjct: 66  LSPPALSNWK--VLDVAGGTGDIAFRILNASRKKAHATVLDINSSMLSVGKKRAQKNGLA 123

Query: 155 PLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---- 209
           PL +   VE +AE LPF     D Y  A  I   P   + +REA+RVLK GG+  C    
Sbjct: 124 PLTD--FVEANAEHLPFEDQSFDAYTIAFGIRNVPHINQALREAFRVLKPGGRFLCLEFS 181

Query: 210 -----IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKD 248
                ++  +Y  +                   RY  +    FPK++++      AGF  
Sbjct: 182 NVEMPLLNKIYDLWSFHVIPKLGQFIADNGDAYRYLVESIRKFPKQDDFSHMLNHAGFSR 241

Query: 249 VQLKRI 254
           V  + +
Sbjct: 242 VSYRNL 247


>gi|344213118|ref|YP_004797438.1| 24-sterol C-methyltransferase [Haloarcula hispanica ATCC 33960]
 gi|343784473|gb|AEM58450.1| 24-sterol C-methyltransferase [Haloarcula hispanica ATCC 33960]
          Length = 227

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDNGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y     S
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEIARVLRPGGTAHIAVNYYEENVHS 149

Query: 222 ---RYFADVWMLFPKEEEYIEWFQKAGF 246
              + F D+ M      EY E F++AG 
Sbjct: 150 HEWQEFIDIEMTRWSGPEYREAFREAGL 177


>gi|167585803|ref|ZP_02378191.1| Methyltransferase type 11 [Burkholderia ubonensis Bu]
          Length = 250

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 21/171 (12%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLK 157
           AL  A  +     V+D+G G G  +  +  H  A+ V   D +P  LA    A ++    
Sbjct: 32  ALADAVRATPGAAVLDLGCGAGHASFAVAPH--AREVVAYDLAPQMLATVDAAARERGFA 89

Query: 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPV 214
             +   G AE LPF     D  VS  S  +W D    + EA RVLK GG+  +I   GP 
Sbjct: 90  NIRTCHGPAERLPFDAATFDWVVSRMSAHHWHDVPAALAEARRVLKPGGRVLMIDIAGPD 149

Query: 215 YPTFWLSRYFADVWMLFP-------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
           +P   L  Y   + +L         + +E++  F+ AGF D Q   +  +W
Sbjct: 150 HPL--LDTYLQALEVLRDASHVRNYRADEWLAMFRGAGF-DAQ---VASRW 194


>gi|333986525|ref|YP_004519132.1| type 11 methyltransferase [Methanobacterium sp. SWAN-1]
 gi|333824669|gb|AEG17331.1| Methyltransferase type 11 [Methanobacterium sp. SWAN-1]
          Length = 206

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 29/172 (16%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI--LDQSPHQLAKAKQK 153
           D+  D L   D S+    ++DVG GTG     ++  +  + V    LD SP  L+ A+  
Sbjct: 38  DLMIDKLNSLDYSS----LLDVGFGTG----EVLSRISCEGVRFSGLDISPQMLSIAR-- 87

Query: 154 EPLKE-CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           E L E   +  GD+E+LP+  +  D  +   S  ++P+P++ + E  RVLK GGK  +  
Sbjct: 88  ENLGESVDLRLGDSEELPWDDESFDVVMCLNSFHHYPNPEKVLNEMGRVLKTGGKIVMAD 147

Query: 213 PVYPTFWLSRYFADVWMLFP-----------KEEEYIEWFQKAGFKDVQLKR 253
           P     W S  F  +  LF             E E  +   ++GFK+++ +R
Sbjct: 148 P-----WQSTPFRQIMNLFICFNGGGDVKIYSESEICDLLSRSGFKNIEWER 194


>gi|218782700|ref|YP_002434018.1| type 11 methyltransferase [Desulfatibacillum alkenivorans AK-01]
 gi|218764084|gb|ACL06550.1| Methyltransferase type 11 [Desulfatibacillum alkenivorans AK-01]
          Length = 220

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EP-LKECKIVEGDAEDLPF 171
           ++DVG G G     + +      +  +D S  Q+ +A ++  P +   +I +G A +LP+
Sbjct: 46  LLDVGCGGGHILERLAEKFPQLTLAGVDLSEEQVNRANERLRPYVSRTQIRQGSALNLPY 105

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           P D  D  +S GSI++WPD   G+ E  RVLK GG+  I+
Sbjct: 106 PPDKFDVILSTGSIKHWPDKVLGLSECLRVLKPGGRLLIM 145


>gi|448293586|ref|ZP_21483691.1| methyl transferase-like protein [Haloferax volcanii DS2]
 gi|445570447|gb|ELY25010.1| methyl transferase-like protein [Haloferax volcanii DS2]
          Length = 213

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPA-DLSNRNM-LVVDVGGGTGFTTLGIVKHV 132
           +F RF + VYD V+ P          ALE A D ++R++  VVD+GGG+G  TL +    
Sbjct: 29  FFDRF-APVYDLVMPPADPG------ALETALDRADRDVERVVDIGGGSGRATLAL---- 77

Query: 133 DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
           D     +LD+S   L +A+ +    +C  V GDA  LPF  D  D      +  + P+ Q
Sbjct: 78  DVPERIVLDRSAGMLRRARGRG--LDC--VRGDARKLPFADDSLDAVTVVDAFHHMPN-Q 132

Query: 193 RGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKAG 245
           RG+  E +RVL  GG    +    P   L R       +      F   +E + + ++ G
Sbjct: 133 RGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFATPDELVRFLERVG 191

Query: 246 FKDVQLKR 253
           F+   ++R
Sbjct: 192 FEAAVVER 199


>gi|319404950|emb|CBI78552.1| ubiquinone/menaquinone biosynthesis [Bartonella sp. AR 15-3]
          Length = 260

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 76/184 (41%), Gaps = 33/184 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA---KAKQKEPLK 157
           L P  +SN   L  DV GGTG     I+     K +VTILD +   L+   K  QK  L 
Sbjct: 66  LSPPAISNWKAL--DVAGGTGDIAFRILNASRKKAHVTILDINGSMLSIGKKRAQKNNLA 123

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                +E +AE LPF     D Y  A  I   P   + +REA+RVLK GG   C      
Sbjct: 124 SLIDFIEANAELLPFEDQSFDAYTIAFGIRNIPHIDKALREAFRVLKPGGHFLCLEFSNV 183

Query: 210 ---IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              ++  +Y  +                   RY  +    FPK+ ++    +KAGF  V 
Sbjct: 184 EMPLLDKIYDLWSFHAIPKLGQFITGDRDAYRYLVESIRKFPKQNDFAHMIRKAGFSSVS 243

Query: 251 LKRI 254
            + +
Sbjct: 244 YRNL 247


>gi|381337405|ref|YP_005175180.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides J18]
 gi|356645371|gb|AET31214.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides J18]
          Length = 236

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 39/196 (19%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK 151
           W + + D  + P     R   ++D+  GT    + + ++ D+ +  I LD S   LA  +
Sbjct: 36  WRQKVMDKMVFP-----RKAKIIDLATGTADWAIALAENSDSDSEIIGLDFSESMLAVGQ 90

Query: 152 QKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
            K  +    ++  + +GD  DL FP +  D       +   PDP++GI+E YR+LK GG+
Sbjct: 91  TKVDISDYSEKITLEQGDVMDLEFPDNSFDIVTIGFGLRNLPDPKQGIKEMYRILKPGGQ 150

Query: 208 ACII------GPVYPTFWLSRYFADVWMLFPK----------------EEEYIEWFQ--- 242
             I+       P+   FW   YF  V  LF +                 E ++++     
Sbjct: 151 LVILETSQPDSPLVKPFW-QLYFGHVMPLFGRVFAKGKYQEYKYLDETTEHFMDYMTLGQ 209

Query: 243 ---KAGFKDVQLKRIG 255
              K+GFK V++ R  
Sbjct: 210 LLLKSGFKKVRISRFN 225


>gi|448602385|ref|ZP_21656441.1| methyl transferase-like protein [Haloferax sulfurifontis ATCC
           BAA-897]
 gi|445747900|gb|ELZ99354.1| methyl transferase-like protein [Haloferax sulfurifontis ATCC
           BAA-897]
          Length = 197

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 27/188 (14%)

Query: 69  HKKEAFWFYRFLSIVYDHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           H      F+   + VYD V+   +PG        DAL  AD       VVD+GGG+G  T
Sbjct: 6   HGAGDVRFFDRFAPVYDLVMPPADPGALA-----DALGRADRPVER--VVDIGGGSGRAT 58

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           L +    D     +LD+S   L +A+Q+    +C  V GDA +LPF  D  D      + 
Sbjct: 59  LAL----DVPERIVLDRSAGMLRRARQRG--LDC--VRGDARELPFADDSLDAVTVVDAF 110

Query: 186 EYWPDPQRGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYI 238
            + P+ QRG+  E +RVL  GG    +    P   L R       +      F   +E +
Sbjct: 111 HHMPN-QRGVAEEVFRVLAPGG-VFAVNEFDPDTLLGRGLVAAERVVGFGSAFATPDELV 168

Query: 239 EWFQKAGF 246
            + ++ GF
Sbjct: 169 RFLERVGF 176


>gi|395782199|ref|ZP_10462603.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella rattimassiliensis 15908]
 gi|395419138|gb|EJF85439.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella rattimassiliensis 15908]
          Length = 260

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP----LKECKIVEGDAED 168
           V+DV GGTG     I+     K + T+LD +   L   KQ+            VE +AE 
Sbjct: 76  VLDVAGGTGDIAFRILNASRQKAHATVLDINESMLNVGKQRAQKNGLASLIDFVEANAEY 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTF 218
           LPF     D Y  A  I   P   + ++EA+RVLKLGG+  C         ++  +Y  +
Sbjct: 136 LPFEDQSFDAYTIAFGIRNVPHIDQALKEAFRVLKLGGRFLCLEFSNVEMPLLDKIYDLW 195

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                              RY  +    FPK++++    +KAGF  V  + +
Sbjct: 196 SFHAIPKIGQFIANDGDAYRYLVESIRKFPKQDDFAHMIKKAGFSRVSYRNL 247


>gi|193212126|ref|YP_001998079.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Chlorobaculum parvum NCIB 8327]
 gi|254789913|sp|B3QLI9.1|UBIE_CHLP8 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|193085603|gb|ACF10879.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Chlorobaculum parvum NCIB 8327]
          Length = 241

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 31/165 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K   AK VT  D SP  LA A++K P    +  EG AE +PF  
Sbjct: 66  ILDVATGTGDLAASMAKIPGAK-VTGYDLSPEMLAIARKKYP--NIEFHEGFAEKMPF-A 121

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFADV 227
           D +   VSAG  +  + D  +G++E +RVLK GG A II P+ P   + +     YF +V
Sbjct: 122 DQSFHVVSAGFGVRNFEDLAQGMKEFHRVLKPGGCAYIIEPMIPRNPVMKKLYLIYFKNV 181

Query: 228 W---------------------MLFPKEEEYIEWFQKAGFKDVQL 251
                                   FP+ E + +  ++AGFK  + 
Sbjct: 182 LPKIAGMFSKSTFAYDYLPNSVEQFPQAEAFTKILKQAGFKKAEF 226


>gi|94968143|ref|YP_590191.1| UbiE/COQ5 methyltransferase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550193|gb|ABF40117.1| UbiE/COQ5 methyltransferase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 223

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 68  QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLG 127
           Q +K + W  R ++      +N  H    M D  L+   ++ R+  ++DVG G G T   
Sbjct: 22  QFRKPSGWLGRGIA----RSMNVSH--GQMTDWGLQQVAVA-RDAAILDVGCGGGETVRK 74

Query: 128 IVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDLPFPTDYADRYVSAG 183
           + +   A +V  +D S   +A A++    +      +I EG    LPF     D   +  
Sbjct: 75  LAEMAPAGSVVGVDLSAASVAVARKTNAAQVAAGRVRIEEGSVAALPFVDASFDVVTAVE 134

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP----KEEEYIE 239
           +  YWPD    +RE  RVLK GG   +I   Y    L   +A V  L       ++E+ +
Sbjct: 135 THYYWPDLPANVREIRRVLKPGGSFALIAEAYRGGPLGLLYAVVMPLLGGKLLSDKEHRD 194

Query: 240 WFQKAGFKDV 249
              +AGF DV
Sbjct: 195 LLVQAGFVDV 204


>gi|307131018|ref|YP_003883034.1| S-adenosyl-L-methionine-dependent methyltransferase [Dickeya
           dadantii 3937]
 gi|306528547|gb|ADM98477.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Dickeya dadantii 3937]
          Length = 256

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 10/123 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +  +   V   NV   D SP  L   A A Q++ L   +  +  AE LP
Sbjct: 49  VLDLGCGAGHVSFTVASLV--GNVVACDLSPRMLDVVASAAQEKGLTNIRTQQAMAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSRYFADV 227
           F  D  D  +S  S  +W D  + +RE  RVLK  G+A    +I P +P   L  Y   V
Sbjct: 107 FADDSFDVVISRYSAHHWQDVGQALREVKRVLKPEGEAILMDVISPGHPV--LDVYLQTV 164

Query: 228 WML 230
            ML
Sbjct: 165 EML 167


>gi|379713519|ref|YP_005301857.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           massiliae str. AZT80]
 gi|376334165|gb|AFB31397.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           massiliae str. AZT80]
          Length = 248

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +A++K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAQKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI--------- 210
                AE+LPFP D  D Y  A  I   PD  + ++EA RVLK  GK  C+         
Sbjct: 116 FTIASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           I   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 IKDFYKFYSFNIIPSIGQMIVGNKEAYEYLVESIELFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|418565348|ref|ZP_13129755.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21264]
 gi|371974017|gb|EHO91359.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21264]
          Length = 241

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAE 167
           + M  +DV  GTG  T+ + K V +   VT +D S + L   K+K   ++  K+V GDA 
Sbjct: 49  KGMKALDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLS 221
           +LPF  +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    +
Sbjct: 109 ELPFEDNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYA 167

Query: 222 RYFADVW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
            YF  V      LF K +E  EW Q++ F      +LKR+
Sbjct: 168 LYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|23500788|ref|NP_700228.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis 1330]
 gi|376279011|ref|YP_005109044.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis VBI22]
 gi|384223571|ref|YP_005614736.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis 1330]
 gi|48474468|sp|Q8FUZ3.1|UBIE_BRUSU RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|23464445|gb|AAN34233.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Brucella suis 1330]
 gi|343385019|gb|AEM20510.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis 1330]
 gi|358260449|gb|AEU08182.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis VBI22]
          Length = 269

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEVSGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  VY   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|395778931|ref|ZP_10459442.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella elizabethae Re6043vi]
 gi|423714779|ref|ZP_17689003.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella elizabethae F9251]
 gi|395417106|gb|EJF83458.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella elizabethae Re6043vi]
 gi|395430998|gb|EJF97026.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella elizabethae F9251]
          Length = 260

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 37/175 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE------PLKECKIVEGDA 166
           V+DV GGTG     I+     K + T+LD +   L   KQ+       PL     VE +A
Sbjct: 76  VLDVAGGTGDIAFRILNASRQKAHATVLDINGSMLNVGKQRAQKNGLAPL--IDFVEANA 133

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVYPTFWLSRYFA 225
           E LPF     D Y  A  I   P   + +REA+RVLK GG+  C+        WL + + 
Sbjct: 134 EHLPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNVEMPWLDKIY- 192

Query: 226 DVWML--------------------------FPKEEEYIEWFQKAGFKDVQLKRI 254
           D+W                            FPK++++    ++AGF  V  + +
Sbjct: 193 DLWSFHAIPKLGQCIANDGDAYRYLVESIRKFPKQDDFAHMIKQAGFSRVSYRNL 247


>gi|323136852|ref|ZP_08071933.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Methylocystis sp. ATCC 49242]
 gi|322398169|gb|EFY00690.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Methylocystis sp. ATCC 49242]
          Length = 256

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     I ++  A   + +LD +   L     +A+++    +   V+ +AE L
Sbjct: 73  LDVAGGTGDVAFRIARNSAADAEIVVLDINGDMLEVGRDRARERGIEGKLDFVQANAESL 132

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
           PFP  + D Y  A  I   P  Q  + EAYRVLK GG+  C+         +  +Y  + 
Sbjct: 133 PFPDAHFDAYTIAFGIRNVPRIQVALEEAYRVLKPGGRFLCLEFSQVNVPGLDKIYEAYS 192

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                RY  +    FP  EE+    + AGF+    +R+
Sbjct: 193 FNVIPTVGKLVAGDAEPYRYLVESIRKFPPAEEFERMIRAAGFRRTGFERL 243


>gi|161621114|ref|YP_001595000.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           canis ATCC 23365]
 gi|260567692|ref|ZP_05838161.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 4 str. 40]
 gi|261754007|ref|ZP_05997716.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 3 str. 686]
 gi|376277428|ref|YP_005153489.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella canis HSK A52141]
 gi|189037015|sp|A9MCZ2.1|UBIE_BRUC2 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|161337925|gb|ABX64229.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           canis ATCC 23365]
 gi|260154357|gb|EEW89438.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 4 str. 40]
 gi|261743760|gb|EEY31686.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 3 str. 686]
 gi|363405802|gb|AEW16096.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella canis HSK A52141]
          Length = 269

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEVSGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  VY   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|383488077|ref|YP_005405756.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Chernikova]
 gi|383488922|ref|YP_005406600.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Katsinyian]
 gi|383489762|ref|YP_005407439.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Dachau]
 gi|383499902|ref|YP_005413263.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. BuV67-CWPP]
 gi|386082546|ref|YP_005999124.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia prowazekii str. Rp22]
 gi|21542473|sp|Q9ZCP3.2|UBIE_RICPR RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|292572311|gb|ADE30226.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Rickettsia prowazekii str. Rp22]
 gi|380760956|gb|AFE49478.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Chernikova]
 gi|380761801|gb|AFE50322.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Katsinyian]
 gi|380762648|gb|AFE51168.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. BuV67-CWPP]
 gi|380763485|gb|AFE52004.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           prowazekii str. Dachau]
          Length = 248

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK--NVTIL--DQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K    +  N++++  D +   L  AK+K       +  K
Sbjct: 56  NLNSNILDVASGSGDIALKLAKKAKDRGNNISLILSDINEEMLNNAKKKSIDLNLFQNIK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKAC---------I 210
            +  +AE+LPF  +  D Y  A  I   PD  + ++EAYRVLK +G   C         I
Sbjct: 116 FIVANAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFVCLEFSKVKEGI 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++++    +++GF++V  K +
Sbjct: 176 LKDFYKFYSFNIIPSIGQIIAGNKEAYEYLVESIALFPSQDDFRIMIKESGFEEVHYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|154274592|ref|XP_001538147.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           capsulatus NAm1]
 gi|150414587|gb|EDN09949.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           capsulatus NAm1]
          Length = 319

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  L++ K++              
Sbjct: 120 ILDVAGGTGDIAFRMLDHATNINNDHNTRVTIADINPDMLSEGKKRSLETPYYNTDRLSF 179

Query: 162 VEGDAEDLPFPTDYA-DRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           ++G+AE LP   D + D Y  A  I  + D Q  I EA+R+LK GG  AC         +
Sbjct: 180 MQGNAESLPTVADNSIDLYTVAFGIRNFTDKQAAINEAFRILKPGGVFACLEFSKVTNGL 239

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    Q+AGF
Sbjct: 240 FDQVYKRWSFSAIPLIGHLVAGDRSSYQYLVESIEKFPSQEEFCRMIQQAGF 291


>gi|154252842|ref|YP_001413666.1| type 11 methyltransferase [Parvibaculum lavamentivorans DS-1]
 gi|154156792|gb|ABS64009.1| Methyltransferase type 11 [Parvibaculum lavamentivorans DS-1]
          Length = 330

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 13/152 (8%)

Query: 113 LVVDVGGGTG--FTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAE 167
           L+ D+G GTG      G      AK+   +D SP  LA A+ +    PL+ C I +GD  
Sbjct: 151 LIADLGTGTGRMLELFG----PKAKSGVGIDLSPEMLALARTQLAQAPLQNCSIRQGDLY 206

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPVYPTFWLSRYFA 225
           DLP   + AD       + Y  DP   I EA R+LK GG+  I    P +   +L    A
Sbjct: 207 DLPMQDETADLVTLHMVLHYLDDPAASIAEAVRILKPGGRLLIADFAP-HELDYLRETHA 265

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
              + F  E+E  EW   AG +  + + + P+
Sbjct: 266 HRRLGF-GEDEVKEWLADAGLQIRETRHLPPE 296


>gi|15607083|ref|NP_214465.1| hypothetical protein aq_2139 [Aquifex aeolicus VF5]
 gi|2984338|gb|AAC07859.1| putative protein [Aquifex aeolicus VF5]
          Length = 217

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 17/160 (10%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152
           W    R  A    +    + LV+D+G GTGF +    + V+   V  LD S   +AKA +
Sbjct: 19  WAVPQRKSAKILVEFVKPSGLVLDLGCGTGFVS----EFVNDCEVVGLDIS-EGMAKAYR 73

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +   K  K+V G+AE+LPF     D  +S  S+ +W D ++ IREA RV K      I  
Sbjct: 74  E---KFRKVVIGNAENLPFKDRSFDFVLSNFSL-HWSDWRKSIREALRVCKNFVGVAI-- 127

Query: 213 PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
           PVY +   S +       FPK EE +E F+   FK + L+
Sbjct: 128 PVYGSVSFSEF------PFPKAEEILEEFKPQEFKIINLE 161


>gi|333379489|ref|ZP_08471211.1| hypothetical protein HMPREF9456_02806 [Dysgonomonas mossii DSM
           22836]
 gi|332885055|gb|EGK05307.1| hypothetical protein HMPREF9456_02806 [Dysgonomonas mossii DSM
           22836]
          Length = 272

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           V+D+G G G         V +   V  +D SP  + KA++   K      + +EGD E++
Sbjct: 81  VLDLGSGAGNDCFIARSEVGETGKVIGIDFSPQMIEKARKNATKRGYTNVEFIEGDIENM 140

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----IGPVYPTFWLSRYFA 225
           P P    D  VS   +   P+  +  +E YRVLK  G  CI    +  V+P     + F 
Sbjct: 141 PLPDSSIDVVVSNCVLNLLPEKDKIFKEIYRVLKKEGHFCISDVVLNGVFP-----KEFT 195

Query: 226 DVWMLFP-------KEEEYIEWFQKAGFKDVQLKR 253
           D   L+        ++++Y+   +KA F D++++R
Sbjct: 196 DNASLYAGCIASAIQKDDYLGEIKKANFTDIKIER 230


>gi|289522449|ref|ZP_06439303.1| UbiE/COQ5 methyltransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504285|gb|EFD25449.1| UbiE/COQ5 methyltransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 233

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDL 169
           M ++D+G GTG  +L + K      VT +D S   L KA++K   +   I     DA DL
Sbjct: 43  MEILDIGCGTGNLSLELAKL--GARVTGIDISEAMLVKAREKAARENLCINFCCADANDL 100

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           PF  +  D  VS  ++E+  D ++ + E YRVLK GG+  +IG +      SRY+
Sbjct: 101 PFEDETFDAAVSLSALEFSSDLKKTLSEIYRVLKPGGRM-VIGLIGGGSAWSRYY 154


>gi|420192227|ref|ZP_14698087.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM023]
 gi|394261438|gb|EJE06235.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus epidermidis NIHLM023]
          Length = 241

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + + V +K  VT LD S + L   KQK   L   ++V GDA +LPF 
Sbjct: 54  LDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLEVGKQKTASLDNIQLVHGDAMNLPFD 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-----SRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    PT  L     S YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLSALKEMQRVLKPGGMVVCLETSQPTLPLFKQIYSLYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK 247
           V      +F K +E  EW Q++ F 
Sbjct: 173 VMPIFGKMFAKSKEEYEWLQQSTFN 197


>gi|115372286|ref|ZP_01459596.1| methyltransferase, UbiE/COQ5 family [Stigmatella aurantiaca
           DW4/3-1]
 gi|310817304|ref|YP_003949662.1| type 11 methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|115370751|gb|EAU69676.1| methyltransferase, UbiE/COQ5 family [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390376|gb|ADO67835.1| Methyltransferase type 11 [Stigmatella aurantiaca DW4/3-1]
          Length = 281

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 17/147 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAE 167
            M V+D G G G TT  +       ++T L+    QL +A+++    P      VEGDA 
Sbjct: 70  GMSVLDAGCGFGGTTAALDARFQGVSLTGLNIDARQLERAREQVRPSPGNTVAFVEGDAC 129

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227
            +PFP    D  ++   I ++PD QR   EA RVL+ GG+      V   F   R FA V
Sbjct: 130 AMPFPDASFDAVLAVECIFHFPDRQRFFEEARRVLRPGGRL-----VVSDFVPRRAFAPV 184

Query: 228 W----MLFPKEEEYIEWFQKAGFKDVQ 250
                +LF   +  I     +GF D++
Sbjct: 185 LGAQDLLFGAYQRRI-----SGFVDIR 206


>gi|49483658|ref|YP_040882.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|282904052|ref|ZP_06311940.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905817|ref|ZP_06313672.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908787|ref|ZP_06316605.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|283958234|ref|ZP_06375685.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|295427979|ref|ZP_06820611.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297591051|ref|ZP_06949689.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MN8]
 gi|415682267|ref|ZP_11447583.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS00]
 gi|418582335|ref|ZP_13146413.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|418595997|ref|ZP_13159580.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21342]
 gi|418603313|ref|ZP_13166700.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21345]
 gi|418892137|ref|ZP_13446250.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|418898041|ref|ZP_13452111.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC341D]
 gi|418900909|ref|ZP_13454966.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|418909217|ref|ZP_13463216.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|418917301|ref|ZP_13471260.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|418923084|ref|ZP_13477000.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|418982413|ref|ZP_13530121.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|418986080|ref|ZP_13533766.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|56749739|sp|Q6GGU0.1|UBIE_STAAR RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|49241787|emb|CAG40478.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|282327051|gb|EFB57346.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331109|gb|EFB60623.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595670|gb|EFC00634.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790383|gb|EFC29200.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|295128337|gb|EFG57971.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297575937|gb|EFH94653.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MN8]
 gi|315195367|gb|EFU25754.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS00]
 gi|374393128|gb|EHQ64443.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21345]
 gi|374399252|gb|EHQ70394.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21342]
 gi|377703377|gb|EHT27693.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|377704694|gb|EHT29003.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|377705898|gb|EHT30202.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|377710745|gb|EHT34983.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|377730431|gb|EHT54498.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|377735043|gb|EHT59079.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|377750475|gb|EHT74413.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|377752623|gb|EHT76542.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|377761076|gb|EHT84952.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC341D]
          Length = 241

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAE 167
           + M  +DV  GTG  T+ + K V +   VT +D S + L   K+K   ++  K+V GDA 
Sbjct: 49  KGMKALDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLS 221
           +LPF  +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    +
Sbjct: 109 ELPFEDNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYA 167

Query: 222 RYFADVW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
            YF  V      LF K +E  EW Q++ F      +LKR+
Sbjct: 168 LYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|379009987|ref|YP_005267799.1| type 11 methyltransferase [Acetobacterium woodii DSM 1030]
 gi|375300776|gb|AFA46910.1| methyltransferase type 11 [Acetobacterium woodii DSM 1030]
          Length = 200

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVE-GD 165
           R    +DVG G G+  L I +    + V + D +   L  AKQ      L+E   VE G+
Sbjct: 31  RQGCCLDVGSGPGYLGLAIARQTQMQ-VCLFDINEEALEIAKQNIRAAALEERVYVEQGN 89

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
            E LP+P +  +   S GS+ +W D  +GI E +RVLK GG A
Sbjct: 90  VEALPYPDNAFNLVTSRGSLFFWTDQVKGINEIFRVLKPGGMA 132


>gi|384174089|ref|YP_005555474.1| methyltransferase domain family [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
 gi|349593313|gb|AEP89500.1| methyltransferase domain family [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
          Length = 198

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 20/171 (11%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
             WT D  D          R   +++VG G G+    ++K      +  +D S   L  A
Sbjct: 32  NQWTIDQLD--------ITRGDSILEVGFGPGYCMQQMLKREKDVQLHGIDVSEAMLKLA 83

Query: 151 KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            ++   K  ++++G  E  P P    D+ +S  +   W D  +G+++ YR LK GGKA I
Sbjct: 84  ARRVKSKSVRLIQGSIETFPLPASLYDKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAI 143

Query: 211 IGPVYPTFWLSRYFADVWMLFPKE--EEYIEWFQKAGFK--DVQLKRIGPK 257
                    +    AD      K    + I  F+ AGF+  D+Q K I P+
Sbjct: 144 T--------MQPREADASPEKTKSFGRQMIADFKAAGFEDIDIQFKNIKPE 186


>gi|257092889|ref|YP_003166530.1| type 11 methyltransferase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045413|gb|ACV34601.1| Methyltransferase type 11 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 258

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 15/143 (10%)

Query: 81  SIVYDHV-----INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK 135
           ++ YD +     +  G W    R  AL  A L+   M VVDVG GTG      V+ V A 
Sbjct: 44  AVDYDRIERLMALGSGSW---YRRQALLRAGLAP-GMRVVDVGVGTGLVACEAVRVVGAG 99

Query: 136 NVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPDPQR 193
           ++ I +D SP  L+ A+    +  C   EG AE LP P   AD +VS G ++ +  D   
Sbjct: 100 SLVIGVDPSPGMLSSARVPAGVTLC---EGRAEALPLPDACAD-FVSMGYALRHVGDLSA 155

Query: 194 GIREAYRVLKLGGKACIIGPVYP 216
              E  RVL+ GG AC++   YP
Sbjct: 156 AFSEFRRVLRPGGIACVLEITYP 178


>gi|67458635|ref|YP_246259.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           felis URRWXCal2]
 gi|75536899|sp|Q4UMW4.1|UBIE_RICFE RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|67004168|gb|AAY61094.1| Ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Rickettsia felis URRWXCal2]
          Length = 248

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 34/181 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKN---VTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K   D  N   +T+ D +   L  AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRGNNIALTLSDINEEMLKNAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKACI--------- 210
                AE+LPF  +  D Y  A  I   PD  + ++EAYRVLK +G   C+         
Sbjct: 116 FTVASAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
               Y  +  S                 Y  +   LFP ++E+    ++AGF++V  K +
Sbjct: 176 FKDFYKFYSFSIIPTIGQAITGNKEAYEYLVESIELFPSQDEFRIMLKEAGFEEVSYKNL 235

Query: 255 G 255
            
Sbjct: 236 S 236


>gi|410456366|ref|ZP_11310228.1| methyltransferase [Bacillus bataviensis LMG 21833]
 gi|409928190|gb|EKN65310.1| methyltransferase [Bacillus bataviensis LMG 21833]
          Length = 236

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 15/163 (9%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC--KIVEGDA 166
           + N LV+D G GTG T   + +   AK V  L+ +P  + KAK +   ++   +++ G  
Sbjct: 36  SENSLVLDAGCGTGQTAAYLYQQYKAK-VIGLEINPIMVEKAKDRFQTQQLPIQLIHGSI 94

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--------IGPVYPTF 218
           E++PF  D++  ++ + S+  + D  + + E +RVLK GG+             P     
Sbjct: 95  EEIPF-DDHSFDFILSESVLAFVDKPKALSEFHRVLKKGGRLIANEMTINKRFNPQEEAE 153

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRG 261
            ++ Y  D  +L   EE++    Q+ GFK+++LK   P    G
Sbjct: 154 IMNFYAVDSLLL---EEDWHRLLQEVGFKNIELKAQNPALSHG 193


>gi|227432854|ref|ZP_03914809.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227351381|gb|EEJ41652.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 236

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 34/179 (18%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPL----KECKIVEG 164
           R   ++D+  GT    + + ++ D+ +  I LD S   LA  + K  +    ++  + +G
Sbjct: 48  RKAQIIDLATGTADWAIALAENSDSDSEIIGLDFSESMLAVGQTKVDISDYSEKITLEQG 107

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTF 218
           D  DL FP +  D       +   PDP++GI+E YR+LK GG+  I+       P+   F
Sbjct: 108 DVMDLEFPDNSFDIVTIGFGLRNLPDPKQGIKEMYRILKPGGQLVILETSQPDSPLVKPF 167

Query: 219 WLSRYFADVWMLFPK----------------EEEYIEWFQ------KAGFKDVQLKRIG 255
           W   YF  V  LF +                 E ++++        K+GFK V++ R  
Sbjct: 168 W-QLYFGHVMPLFGRVFAKGKYQEYKYLDETTEHFMDYMTLGQLLLKSGFKKVRISRFN 225


>gi|357015591|ref|ZP_09080590.1| phosphatidylethanolamine N-methyltransferase [Paenibacillus elgii
           B69]
          Length = 205

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 77  YRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN 136
           YR  + +YD   N G +T   R    +   L  +  +++ +G GTG   L  +   D + 
Sbjct: 10  YRIWAPIYDIFFNSGVFTA-ARKKVFQNIQLEPKQKILL-IGIGTG-ADLPFIMGRDVE- 65

Query: 137 VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIR 196
           +T +D SP  L KAK+K    +   +E DA++L FP +  D  ++   +   PDP +  R
Sbjct: 66  ITGIDLSPDMLQKAKRKYGSPQISFLEMDAQELTFPQESFDLVIANLILSVVPDPDQCFR 125

Query: 197 EAYRVLKLGGKACI 210
           E  RV + GG+  I
Sbjct: 126 EMIRVTRTGGRIVI 139


>gi|440684160|ref|YP_007158955.1| Methyltransferase type 11 [Anabaena cylindrica PCC 7122]
 gi|428681279|gb|AFZ60045.1| Methyltransferase type 11 [Anabaena cylindrica PCC 7122]
          Length = 209

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 12/135 (8%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
            R  AL+   L N +  V+D+  G+G TT  +VK   ++NVT LD SP  L +A++  P 
Sbjct: 33  FRQLALQGLTL-NSDTQVLDLCCGSGQTTEFLVKL--SQNVTGLDASPLSLQRARRNVP- 88

Query: 157 KECKIVEGDAEDLPFPTDYADR-YVSAGSIEYWPDPQRGI-REAYRVLKLGGKACII--- 211
                +E  AE++PF     D  + SA   E  P+  R I +E YRVLK GG   ++   
Sbjct: 89  -NATYIEAFAENMPFADHLFDVIHTSAALHEMQPEQLRKIIQEVYRVLKPGGVFTLVDFH 147

Query: 212 GPVYPTFW--LSRYF 224
            P  P FW  LS +F
Sbjct: 148 SPTNPIFWPGLSVFF 162


>gi|296448045|ref|ZP_06889949.1| ubiquinone/menaquinone biosynthesis methyltransferase [Methylosinus
           trichosporium OB3b]
 gi|296254445|gb|EFH01568.1| ubiquinone/menaquinone biosynthesis methyltransferase [Methylosinus
           trichosporium OB3b]
          Length = 252

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     I K   A  ++ +LD +   L     +A ++    + + V+ +AE L
Sbjct: 69  LDVAGGTGDIAFRIAKASPADASIVVLDINGDMLDVGRDRANERGLADKLEFVQANAESL 128

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
           PFP  + D Y  A  I   P  +  + EA+RVLK GG+  C+         +  +Y  + 
Sbjct: 129 PFPDAHFDAYTIAFGIRNVPRIEVALAEAFRVLKPGGRFLCLEFSQVAVPGLDKIYEAYS 188

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                RY  +    FP+ EE+    ++AGF+    +R+
Sbjct: 189 FNVIPAIGKLVAGDSEPYRYLVESIRRFPRAEEFERMIRRAGFRRTGFERL 239


>gi|340794909|ref|YP_004760372.1| hypothetical protein CVAR_1946 [Corynebacterium variabile DSM
           44702]
 gi|340534819|gb|AEK37299.1| hypothetical protein CVAR_1946 [Corynebacterium variabile DSM
           44702]
          Length = 244

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 38/189 (20%)

Query: 103 EPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV 162
           +P +L+ R   VV+VG G+      + +H  A+ V   D S H L +A Q + L    ++
Sbjct: 41  DPTELAGRT--VVEVGCGSAPCAAWLARHSSAR-VVGFDISMHMLRRAPQVDGLH---LL 94

Query: 163 EGDAEDLPFPTDYAD-RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + DA  LPFP D AD  + S G   +  D    + E  RVL+ GG+ C++   +PT W+ 
Sbjct: 95  QADAASLPFPEDAADVVFSSFGGYPFLSDLGSAMAEVARVLRPGGR-CVLAVNHPTAWIF 153

Query: 222 -----------RYFADVWMLFPKEE-----------------EYIEWFQKAGFKDVQLKR 253
                       YF D ++ + +++                 +++  F  AG + V L  
Sbjct: 154 PDDPEELTAAIPYFQDAYLEWERDDPTDPGALRYAEFHHTMGDWVRAFATAGLRLVDL-- 211

Query: 254 IGPKWYRGV 262
           + P+W  G 
Sbjct: 212 VEPEWREGT 220


>gi|402572361|ref|YP_006621704.1| methylase [Desulfosporosinus meridiei DSM 13257]
 gi|402253558|gb|AFQ43833.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfosporosinus meridiei DSM 13257]
          Length = 205

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 15/147 (10%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           +M V++V  GTG   LGI + V  + V   D SP  +  AK+K      K    DA  L 
Sbjct: 41  DMRVLEVATGTGLIALGIARFV--RQVEATDFSPKMIETAKKKIAPSNVKFSIEDATALS 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF----AD 226
           F  D  D  + + ++   PDP+  +    RVLK GG   +I P +    L   F    A 
Sbjct: 99  FANDSFDAVIISNALHIMPDPEAALVSIRRVLKPGG--LLIAPTFAHGHLKNSFWNLNAK 156

Query: 227 VWMLFPKE-------EEYIEWFQKAGF 246
           +  L   E       EEY  + +K GF
Sbjct: 157 ILKLIGFETYSKWTPEEYTGFIEKNGF 183


>gi|254797269|ref|YP_003082111.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Neorickettsia risticii str. Illinois]
 gi|254590510|gb|ACT69872.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Neorickettsia risticii str. Illinois]
          Length = 230

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 29/172 (16%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAE 167
           N  V+D+  GTG  TL ++K   +  + + D++   L  AK +   E     ++V  DA 
Sbjct: 45  NQRVLDMAAGTGDITLRLLKTHISVEIVLCDKNHEMLEIAKDRLLDEGYVNLEVVSADAA 104

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPT 217
            LPF     D YV A  +  + + ++ + EAYRVLK GGK +C+         +  +Y  
Sbjct: 105 QLPFEDCSFDHYVVAFGVRNFSNIEKSLTEAYRVLKPGGKFSCLEFSKVENKCMNSLYSL 164

Query: 218 F------WLSR----------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           +      W+            Y  +    FP  E + E  + AGF  ++ K+
Sbjct: 165 YSRAFIPWIGEKVTKNKEAYTYLIESIKDFPDAETFREIIRGAGFGRIKYKK 216


>gi|225557337|gb|EEH05623.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           capsulatus G186AR]
          Length = 310

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  L++ K++              
Sbjct: 111 ILDVAGGTGDIAFRMLDHATNINNDHHTRVTIADINPDMLSEGKKRSLETPYYNTDRLSF 170

Query: 162 VEGDAEDLPFPTDYA-DRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           ++G+AE LP   D + D Y  A  I  + D Q  I EA+R+LK GG  AC         +
Sbjct: 171 MQGNAESLPTIADNSIDLYTVAFGIRNFTDKQAAINEAFRILKPGGVFACLEFSKVTNGL 230

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    Q+AGF
Sbjct: 231 FDQVYKRWSFSAIPLIGQLVAGDRSSYQYLVESIEKFPSQEEFCRMIQQAGF 282


>gi|17557039|ref|NP_498704.1| Protein COQ-5 [Caenorhabditis elegans]
 gi|21431890|sp|P34666.2|COQ5_CAEEL RecName: Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
           mitochondrial; AltName: Full=Ubiquinone biosynthesis
           methyltransferase COQ5; Flags: Precursor
 gi|351020579|emb|CCD62554.1| Protein COQ-5 [Caenorhabditis elegans]
          Length = 285

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 33/176 (18%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI-------VE 163
           N   +D+ GGTG     I++H     VT+ D +   L   K++   KE  I       V 
Sbjct: 96  NAKCLDMAGGTGDIAFRILRHSPTAKVTVSDINQPMLDVGKKRAE-KERDIQPSRAEWVC 154

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPV 214
            +AE +PF ++  D +  +  I     P++ +REA+RVLK GG+  I         + P+
Sbjct: 155 ANAEQMPFESNTYDLFTMSFGIRNCTHPEKVVREAFRVLKPGGQLAILEFSEVNSALKPI 214

Query: 215 YPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           Y  +  +                +Y  +    FP ++E+    ++ GF +V+ + +
Sbjct: 215 YDAYSFNVIPVLGEILASDRASYQYLVESIRKFPNQDEFARIIREEGFSNVRYENL 270


>gi|406938611|gb|EKD71806.1| methyltransferase type 11 [uncultured bacterium]
          Length = 234

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 114 VVDVGGGTG-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LPF 171
           ++D G GTG F  L   K ++   V  LD S   L +AK+K           D  D LPF
Sbjct: 48  ILDAGCGTGNFEKLLQNKGLNNVKVEALDFSQAMLKRAKRKNGNHSFNFQHFDINDRLPF 107

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           P ++ DR VS  ++    +P   ++E YRVL+ GGK  I  P Y    L  +F
Sbjct: 108 PDNHFDRVVSVNAVYALKEPFSTLQEFYRVLRPGGKILITNPKYCAKILPIFF 160


>gi|229075478|ref|ZP_04208467.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
 gi|229098027|ref|ZP_04228977.1| Methyltransferase type 11 [Bacillus cereus Rock3-29]
 gi|229117045|ref|ZP_04246427.1| Methyltransferase type 11 [Bacillus cereus Rock1-3]
 gi|423378657|ref|ZP_17355941.1| hypothetical protein IC9_02010 [Bacillus cereus BAG1O-2]
 gi|423441711|ref|ZP_17418617.1| hypothetical protein IEA_02041 [Bacillus cereus BAG4X2-1]
 gi|423448064|ref|ZP_17424943.1| hypothetical protein IEC_02672 [Bacillus cereus BAG5O-1]
 gi|423464784|ref|ZP_17441552.1| hypothetical protein IEK_01971 [Bacillus cereus BAG6O-1]
 gi|423534126|ref|ZP_17510544.1| hypothetical protein IGI_01958 [Bacillus cereus HuB2-9]
 gi|423540607|ref|ZP_17516998.1| hypothetical protein IGK_02699 [Bacillus cereus HuB4-10]
 gi|423546840|ref|ZP_17523198.1| hypothetical protein IGO_03275 [Bacillus cereus HuB5-5]
 gi|423623370|ref|ZP_17599148.1| hypothetical protein IK3_01968 [Bacillus cereus VD148]
 gi|228666449|gb|EEL21909.1| Methyltransferase type 11 [Bacillus cereus Rock1-3]
 gi|228685464|gb|EEL39392.1| Methyltransferase type 11 [Bacillus cereus Rock3-29]
 gi|228707727|gb|EEL59911.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
 gi|401130475|gb|EJQ38144.1| hypothetical protein IEC_02672 [Bacillus cereus BAG5O-1]
 gi|401174142|gb|EJQ81354.1| hypothetical protein IGK_02699 [Bacillus cereus HuB4-10]
 gi|401180344|gb|EJQ87506.1| hypothetical protein IGO_03275 [Bacillus cereus HuB5-5]
 gi|401258539|gb|EJR64724.1| hypothetical protein IK3_01968 [Bacillus cereus VD148]
 gi|401634304|gb|EJS52071.1| hypothetical protein IC9_02010 [Bacillus cereus BAG1O-2]
 gi|402416543|gb|EJV48859.1| hypothetical protein IEA_02041 [Bacillus cereus BAG4X2-1]
 gi|402419221|gb|EJV51501.1| hypothetical protein IEK_01971 [Bacillus cereus BAG6O-1]
 gi|402463096|gb|EJV94798.1| hypothetical protein IGI_01958 [Bacillus cereus HuB2-9]
          Length = 239

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++G GTG T   + K    K VT ++++   + KAK +   E L   ++++GDAE LP
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAIEKNEIMIQKAKDRWLFERLN-VQLIQGDAERLP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
              D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L
Sbjct: 99  CLND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQL 157

Query: 231 FP-----KEEEYIEWFQKAGFKDVQL 251
           +       E E+++ FQKA FK + +
Sbjct: 158 YGMKELLTENEWVQLFQKANFKRITI 183


>gi|116621590|ref|YP_823746.1| type 11 methyltransferase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224752|gb|ABJ83461.1| Methyltransferase type 11 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 217

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 17/195 (8%)

Query: 93  WTEDMRDDALEPADLSN----RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA 148
           W  ++   AL    L++    RN  ++DVG G G T   +        V  +D +   +A
Sbjct: 33  WMMNLSHSALTDWGLTHITIGRNFTILDVGCGGGRTIGKLSAQAIEGMVHGVDYANGSVA 92

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
            ++         I +     LPFP +  D   +  +  YWPD  R ++E  RVLK GG  
Sbjct: 93  ASRAAMKSGRVAITQASVSQLPFPDNTFDLVTAVETQYYWPDLVRDMQEILRVLKPGGTL 152

Query: 209 CIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLI 268
            +I   Y        F +   L  +E+   E F  +G++ +Q+           R+ G +
Sbjct: 153 LVIAESYAKGKHGTKFLNFARLSVEEQR--ERFSTSGYQRIQIFE--------ERKQGWL 202

Query: 269 MGCSVTGVKPASGDS 283
             C+ TG+K   G S
Sbjct: 203 --CA-TGIKAGGGRS 214


>gi|374635297|ref|ZP_09706899.1| Methyltransferase type 11 [Methanotorris formicicus Mc-S-70]
 gi|373562885|gb|EHP89090.1| Methyltransferase type 11 [Methanotorris formicicus Mc-S-70]
          Length = 205

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKECKIVE--GDAED 168
           + +D+G GTG    GI K  + K V  LD S   L   ++  KE   + KI+   GD  +
Sbjct: 37  ICIDLGTGTGALARGIAKITNLK-VYALDISEDMLKLTEKYTKEEKLDGKIIPILGDVHN 95

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227
           +PF  ++AD  +S GS+ +W D  +  +E YRVLK  G A I G         + FA++
Sbjct: 96  MPFKDNFADLIISRGSMFFWEDKVKAFKEIYRVLKPEGMAHIGGGFGNKELKEKIFAEM 154


>gi|359394010|ref|ZP_09187063.1| Phosphatidylethanolamine N-methyltransferase [Halomonas boliviensis
           LC1]
 gi|357971257|gb|EHJ93702.1| Phosphatidylethanolamine N-methyltransferase [Halomonas boliviensis
           LC1]
          Length = 210

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 9/109 (8%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK-AKQKEPLK---ECKIVEGDAE 167
           M V+ VG GTG   L  + H    + T  D +P  + + AK+ E L+   EC ++  DAE
Sbjct: 44  MRVLLVGAGTGLD-LPFLPHDIELHAT--DIAPAMVKRTAKRAEALRRDVECVVM--DAE 98

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
            L +P ++ D  V    I   PDPQ+G+ EAYRVLK GG+ C++    P
Sbjct: 99  ALSYPDEHFDAVVMHLIIAVMPDPQQGLAEAYRVLKPGGQLCVMDKFQP 147


>gi|240277979|gb|EER41486.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           capsulatus H143]
 gi|325096040|gb|EGC49350.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           capsulatus H88]
          Length = 317

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  L++ K++              
Sbjct: 118 ILDVAGGTGDIAFRMLDHATNINNDHNTRVTIADINPDMLSEGKKRSLETPYYNTDRLSF 177

Query: 162 VEGDAEDLPFPTDYA-DRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           ++G+AE LP   D + D Y  A  I  + D Q  I EA+R+LK GG  AC         +
Sbjct: 178 MQGNAESLPTIADNSIDLYTVAFGIRNFTDKQAAINEAFRILKPGGVFACLEFSKVTNGL 237

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    Q+AGF
Sbjct: 238 FDQVYKRWSFSAIPLIGQLVAGDRSSYQYLVESIEKFPSQEEFCRMIQQAGF 289


>gi|296332783|ref|ZP_06875243.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673128|ref|YP_003864800.1| methyltransferase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150063|gb|EFG90952.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411372|gb|ADM36491.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 198

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 12/148 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   KE ++++G  E  P   
Sbjct: 47  ILEVGFGPGYCMQQMLKRERDIHLHGIDVSEAMLKLAARRVKSKEVRLIQGSVESFPLTA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D ++G+++ Y+ LK GGKA I         +    AD      K
Sbjct: 107 SFYDKVISVNNYTIWNDQKKGMKQIYQALKPGGKAAIT--------MQPREADASPEKTK 158

Query: 234 E--EEYIEWFQKAGFKDVQL--KRIGPK 257
              ++ I  F+ AGF+D++L  K I P+
Sbjct: 159 SFGKQMIADFKAAGFEDIELQFKNIKPE 186


>gi|386819921|ref|ZP_10107137.1| ubiquinone/menaquinone biosynthesis methyltransferase [Joostella
           marina DSM 19592]
 gi|386425027|gb|EIJ38857.1| ubiquinone/menaquinone biosynthesis methyltransferase [Joostella
           marina DSM 19592]
          Length = 243

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK----IVEGDAEDL 169
           ++D+  GTG   + +     A+ +T LD SP  L   KQK   K+      +V GD+E L
Sbjct: 61  ILDIATGTGDLAINMALKTAAEKITGLDISPGMLEVGKQKIANKKLSNKIDMVIGDSESL 120

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           PF  +  D    A  +  + D ++G+ E YRVLK GG   ++    PT
Sbjct: 121 PFDDNSFDAITVAFGVRNFEDLEKGLSEIYRVLKKGGIFVVLETSNPT 168


>gi|261750752|ref|ZP_05994461.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 5 str. 513]
 gi|261740505|gb|EEY28431.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brucella suis bv. 5 str. 513]
          Length = 269

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P     + EAYRVLK GG+  C         ++  VY   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDEALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|293603173|ref|ZP_06685606.1| UbiE/COQ5 family methyltransferase [Achromobacter piechaudii ATCC
           43553]
 gi|292818404|gb|EFF77452.1| UbiE/COQ5 family methyltransferase [Achromobacter piechaudii ATCC
           43553]
          Length = 256

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  T  +   V  K+VT  D S   L   A    K  L      +G AE LP
Sbjct: 48  VLDLGCGGGHVTFHVAPEV--KDVTAYDLSQQMLDVVAGEAAKRGLANVATRQGKAEYLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  RG+REA+RVLK GG A     V P
Sbjct: 106 FADAEFDVVMSRYSTHHWQDAGRGLREAFRVLKPGGVAVFADVVSP 151


>gi|229104114|ref|ZP_04234788.1| Methyltransferase type 11 [Bacillus cereus Rock3-28]
 gi|228679321|gb|EEL33524.1| Methyltransferase type 11 [Bacillus cereus Rock3-28]
          Length = 239

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++G GTG T   + K    K VT ++++   + KAK +   E L   ++++GDAE LP
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAIEKNEIMIQKAKDRWLFERLN-VQLIQGDAEQLP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
              D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L
Sbjct: 99  CLND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIGKSEEEKIAQL 157

Query: 231 FP-----KEEEYIEWFQKAGFKDVQL 251
           +       E E+++ FQKA FK + +
Sbjct: 158 YGMKELLTENEWVQLFQKANFKRITI 183


>gi|99082868|ref|YP_615022.1| demethylmenaquinone methyltransferase /
           2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
           [Ruegeria sp. TM1040]
 gi|123077368|sp|Q1GC56.1|UBIE_SILST RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|99039148|gb|ABF65760.1| demethylmenaquinone methyltransferase /
           2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
           [Ruegeria sp. TM1040]
          Length = 250

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKEC-KIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   E + EC   V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLKRAGHGHSTVLDLTTPMLEEGRKRAEAEQMAECLDWVTGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTFW 219
           PF  +  D Y  +  I     PQ  + EAYRVLK GG+  +          +  +Y  + 
Sbjct: 127 PFKDNTFDVYTISFGIRNVTRPQEALNEAYRVLKPGGRLMVLEFSQLPNDGLQKLYDLYS 186

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +E ++   + AGF++ + + +
Sbjct: 187 FNVIPRMGQMIAGDYDSYQYLVESIRNFPDQETFLGMVKSAGFENAKHRNL 237


>gi|448748133|ref|ZP_21729778.1| Methyltransferase type 11 [Halomonas titanicae BH1]
 gi|445564254|gb|ELY20378.1| Methyltransferase type 11 [Halomonas titanicae BH1]
          Length = 210

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 9/109 (8%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK-AKQKEPLK---ECKIVEGDAE 167
           M V+ VG GTG   L  + H    + T  D +P  + + AK+ E L+   EC ++  DAE
Sbjct: 44  MRVLLVGAGTGLD-LPFLPHDIELHAT--DIAPAMVKRTAKRAEELRHDVECSVM--DAE 98

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
            L +P ++ +  +    I   PDPQRG+ EAYRVLK GG+ C++    P
Sbjct: 99  ALNYPDEHFEAVIMHLIIAVMPDPQRGLAEAYRVLKPGGQLCVMDKFQP 147


>gi|428168859|gb|EKX37799.1| hypothetical protein GUITHDRAFT_116106 [Guillardia theta CCMP2712]
          Length = 365

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 46/175 (26%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHV-------DAKNVTILDQSPHQLAKAKQKEPLKEC--- 159
           RN  VVD+  G+G     + K         +   V  +D S + L +  Q++  + C   
Sbjct: 190 RNKTVVDLSCGSGLMVRRLAKSRAYSKAMGERLQVIAVDYSENMLGEVIQRKKEENCPDF 249

Query: 160 KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW 219
            I+  D   LPF     D   S  ++  WP  Q G++E +RVLK GG             
Sbjct: 250 DIIRADVASLPFVDGSLDAIHSGAALHCWPYVQDGLKEVHRVLKPGG------------- 296

Query: 220 LSRYFADVWM-------------LFPKEEEY-------IEWFQK-AGFKDVQLKR 253
             R+FA  ++             L P++ +Y       +EW  + AGFKDV ++R
Sbjct: 297 --RFFASTFLWGVPDEVISLQANLGPRQRQYRFFSVEELEWLMRGAGFKDVNVER 349


>gi|23014693|ref|ZP_00054497.1| COG0500: SAM-dependent methyltransferases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 286

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH--QLAKAKQKEPLKECKIVEGDAEDLPF 171
           V+D+G G G+ T+   +      V  +D +P   +LA+A      +   + EG+AE+LPF
Sbjct: 69  VLDIGCGPGWLTVQYAR--GGAQVDSVDLTPRAVELAQAHLALHGQSATVREGNAEELPF 126

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P D  D   ++G + + PD Q   REA+RV K GG+  I
Sbjct: 127 PDDQFDLVAASGVLHHTPDTQATFREAFRVTKPGGQGKI 165


>gi|269217063|ref|ZP_06160917.1| methlytransferase, UbiE/COQ5 family [Slackia exigua ATCC 700122]
 gi|269129200|gb|EEZ60285.1| methlytransferase, UbiE/COQ5 family [Slackia exigua ATCC 700122]
          Length = 211

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDL 169
            +D+G G G     +++     +VT +D +P  + K++           C+IVEGD   L
Sbjct: 52  AIDIGCGGGANVARLLERCPRGSVTGVDYAPTSVDKSRSFNARAIAQGSCRIVEGDVMAL 111

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW- 228
           PF     D   +  ++ +WPD +R + E  RVL+ GG   I   V  T    R  A  + 
Sbjct: 112 PFADASFDVATAFETVYFWPDIRRSLSEVARVLRRGGTFMISNEVDGTAESDREMAASFS 171

Query: 229 -MLFPKEEEYIEWFQKAGFKDVQLK 252
            M     ++     ++AGF  ++++
Sbjct: 172 GMSMYTGDDLAALLEEAGFDRIEVR 196


>gi|448664656|ref|ZP_21684294.1| 24-sterol C-methyltransferase [Haloarcula amylolytica JCM 13557]
 gi|445774243|gb|EMA25264.1| 24-sterol C-methyltransferase [Haloarcula amylolytica JCM 13557]
          Length = 227

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDDGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y     S
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEIARVLRPGGTAHIAVNYYEENVHS 149

Query: 222 ---RYFADVWMLFPKEEEYIEWFQKAGF 246
              + F D+ M      EY E F++AG 
Sbjct: 150 HEWQEFIDIEMTRWSGPEYREAFREAGL 177


>gi|157826093|ref|YP_001493813.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           akari str. Hartford]
 gi|166234740|sp|A8GPI0.1|UBIE_RICAH RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|157800051|gb|ABV75305.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           akari str. Hartford]
          Length = 248

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKN---VTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K   D  N   +T+ D +   L  AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRGNNIALTLSDINEEMLKNAKKKTIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKACI--------- 210
                AE+LP+P +  D Y  A  I   PD  + ++EAYRVLK +G   C+         
Sbjct: 116 FTVASAEELPYPDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
               Y  +  S                 Y  +   LFP ++E+    ++AGF++V  K +
Sbjct: 176 FKDFYKFYSFSIIPTIGQVITGNKEAYEYLVESIELFPSQDEFRIMIKEAGFEEVGYKNL 235


>gi|67522573|ref|XP_659347.1| hypothetical protein AN1743.2 [Aspergillus nidulans FGSC A4]
 gi|40744873|gb|EAA64029.1| hypothetical protein AN1743.2 [Aspergillus nidulans FGSC A4]
 gi|259487088|tpe|CBF85480.1| TPA: ubiquinone biosynthesis methlytransferase Coq5, putative
           (AFU_orthologue; AFUA_6G08850) [Aspergillus nidulans
           FGSC A4]
          Length = 314

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 48/204 (23%)

Query: 85  DHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN----- 136
           DH +   NPG       +D+ E      +   ++D+ GGTG     ++ H    N     
Sbjct: 90  DHFVRSLNPGSALPSRDNDSAE------KGWNILDIAGGTGDIAFRMLDHATNINHDYHT 143

Query: 137 -VTILDQSPHQLAKAKQKE------PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYW 188
            V I D +P  LA+ K++         +    ++G+AE +P  P +  D Y     I  +
Sbjct: 144 RVKIADINPDMLAEGKKRSIQTPYYNSERLSFMQGNAEHMPSIPDNSVDLYTVVFGIRNF 203

Query: 189 PDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFWLS----------------R 222
            D Q  + EAYRVLK GG  AC         +   VY  +  S                +
Sbjct: 204 TDKQAALVEAYRVLKPGGVFACMEFSKVDNPLFNAVYKQWSFSAIPLIGQLVAGDRESYQ 263

Query: 223 YFADVWMLFPKEEEYIEWFQKAGF 246
           Y  +    FP +EE+    QKAGF
Sbjct: 264 YLVESIEKFPSQEEFRGMIQKAGF 287


>gi|325291754|ref|YP_004277618.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium sp. H13-3]
 gi|418407847|ref|ZP_12981164.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium tumefaciens 5A]
 gi|325059607|gb|ADY63298.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium sp. H13-3]
 gi|358005833|gb|EHJ98158.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium tumefaciens 5A]
          Length = 258

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  +   + T+LD +   LA    +A +++       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASNRLAHATVLDINGSMLAVGEERAAKRKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  +          +  VY  +
Sbjct: 134 LPFEANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRVYDAW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 194 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRSAGFSRV 240


>gi|395789078|ref|ZP_10468608.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella taylorii 8TBB]
 gi|395431212|gb|EJF97239.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella taylorii 8TBB]
          Length = 262

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 33/184 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA---KAKQKEPLK 157
           L P  +SN    V+DV GGTG     I+     K +VT+LD +   L+   K  QK  L 
Sbjct: 68  LSPPAISNWK--VLDVAGGTGDIAFRILNGSRQKAHVTVLDINSSMLSIGKKRAQKNGLT 125

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                VE +AE LPF     D Y  A  I   P   + +REA+RVLK  G+  C      
Sbjct: 126 SLIDFVEANAEHLPFEDQSFDAYTIAFGIRNVPHIDKALREAFRVLKPSGRFLCLEFSNV 185

Query: 210 ---IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              ++  +Y  +                   RY  +    FPK++++     +AGF  V 
Sbjct: 186 EMPLVDKIYDLWSFHAIPKLGQFIANDGDAYRYLVESIRKFPKQDDFAHMINRAGFSRVS 245

Query: 251 LKRI 254
            + +
Sbjct: 246 YRNL 249


>gi|383191303|ref|YP_005201431.1| methylase involved in ubiquinone/menaquinone biosynthesis [Rahnella
           aquatilis CIP 78.65 = ATCC 33071]
 gi|371589561|gb|AEX53291.1| methylase involved in ubiquinone/menaquinone biosynthesis [Rahnella
           aquatilis CIP 78.65 = ATCC 33071]
          Length = 256

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 6/121 (4%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G   F   G+VK+V A +++   Q    + +A + + L    + +G AE LP
Sbjct: 49  VIDLGCGAGHASFVAAGVVKNVIAYDLSA--QMLDVVTQAARDKQLTNITVQQGVAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + +RE  RVLK GGK  ++  V P    L+ Y   V +
Sbjct: 107 FDDHSADVIISRYSAHHWHDVGQALREVARVLKPGGKFIMMDVVSPGHPLLNIYLQTVEV 166

Query: 230 L 230
           L
Sbjct: 167 L 167


>gi|403529967|ref|YP_006664496.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           quintana RM-11]
 gi|403232039|gb|AFR25782.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           quintana RM-11]
          Length = 260

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 33/184 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAK---QKEPLK 157
           L P  LSN    V+DV GGTG     I+     K + T+LD +   L+  K   QK  L 
Sbjct: 66  LSPPALSNWK--VLDVAGGTGDIAFRILNASRQKAHATVLDINSSMLSVGKKRAQKNGLA 123

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                VE +AE LPF     D Y  A  I   P   + +REA+RVLK GG+  C      
Sbjct: 124 PLIDFVEANAEHLPFEDQSFDAYTIAFGIRNVPHINQALREAFRVLKPGGRFLCLEFSNV 183

Query: 210 ---IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              ++  +Y  +                   RY  +    FPK++++      AGF  V 
Sbjct: 184 EMPLLNKIYDLWSFHVIPKLGQFIADNGDAYRYLVESIRKFPKQDDFSHMLNHAGFSRVS 243

Query: 251 LKRI 254
            + +
Sbjct: 244 YRNL 247


>gi|338708215|ref|YP_004662416.1| type 11 methyltransferase [Zymomonas mobilis subsp. pomaceae ATCC
           29192]
 gi|336295019|gb|AEI38126.1| Methyltransferase type 11 [Zymomonas mobilis subsp. pomaceae ATCC
           29192]
          Length = 254

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 17/207 (8%)

Query: 67  IQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTL 126
           + ++ + F  Y +     D+V++  H +E    D +E +        V+D+G G G  + 
Sbjct: 1   MTNRNDDFTAYHYTPRATDYVLSSVH-SEGADLDEVEQSIKGKGYRRVLDLGCGGGHVSY 59

Query: 127 GIVKHVDAKNVTILDQSPHQL-AKAKQ--KEPLKECKIVEGDAEDLPFPTDYADRYVSAG 183
            I  +VD   V   D +   L A A Q  +  L    + +  AE LPF + + D  V   
Sbjct: 60  RIAPYVD--QVVACDITASMLNAVASQAIERKLPNIMVKQASAEKLPFDSAFFDAIVCRF 117

Query: 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-SRYFADVWMLFPKEE------- 235
           S  +W + + G+REA RVL L G A  I  V P++ L + Y   + +L            
Sbjct: 118 SAHHWGNMEAGLREARRVLHLEGIALFIDSVAPSYPLYNTYLQAIELLRDVSHVRNYTLP 177

Query: 236 EYIEWFQKAGFKDVQLKRIGPKWYRGV 262
           E+I    +AGF    ++++ P+  R V
Sbjct: 178 EWIAALSRAGFS---VQKLTPRRLRMV 201


>gi|225706066|gb|ACO08879.1| methyltransferase Mb3374 [Osmerus mordax]
          Length = 263

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           +ML VD+G GTG  +  +  H   K V  +D S  QL +A+           +G AE+LP
Sbjct: 34  HMLAVDLGCGTGQNSRLLAPHF--KEVVGIDVSESQLEEARAVSGYPNITYRKGTAEELP 91

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           FP    D  ++A S  +W D  R + EA RVLK GG   ++G
Sbjct: 92  FPDSSVD-LLTAASAAHWFDQARFLVEAARVLKPGGCMALLG 132


>gi|448512103|ref|XP_003866677.1| Coq5 methyltransferase [Candida orthopsilosis Co 90-125]
 gi|380351015|emb|CCG21238.1| Coq5 methyltransferase [Candida orthopsilosis Co 90-125]
          Length = 320

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 45/190 (23%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQLAK--- 149
           D  + P+  S+  +  +DV GGTG    G+++H + +       +T+ D +P  L +   
Sbjct: 111 DAGMRPS--SSEPLQFLDVAGGTGDIAFGLLEHAEKRFGDVESKITVADINPDMLKEGEL 168

Query: 150 -------AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
                  AK+ +   E  +  G+  D   P +  D Y  A  I  + D Q+G+  AYRVL
Sbjct: 169 RYVKSKWAKESKNRVEFLVQNGETMD-AIPDNSKDVYTIAFGIRNFTDIQKGLNTAYRVL 227

Query: 203 KLGGK-AC---------IIGPVYPTFWLS----------------RYFADVWMLFPKEEE 236
           K GG  AC         +I   Y  +  S                +Y  +    FPK+EE
Sbjct: 228 KPGGIFACLEFSQVENPVIDYAYQAYSFSLLPLMGQLIANDRDSYQYLVESIQKFPKQEE 287

Query: 237 YIEWFQKAGF 246
           +    +KAGF
Sbjct: 288 FKSMIEKAGF 297


>gi|48474890|sp|Q8UIH5.1|UBIE_AGRT5 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
          Length = 259

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           ++DV GGTG     I++  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 75  ILDVAGGTGDVAFRIIEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 134

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  +          +  VY  +
Sbjct: 135 LPFEANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDMPLLDRVYDAW 194

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 195 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRTAGFSRV 241


>gi|395791638|ref|ZP_10471094.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella alsatica IBS 382]
 gi|395407941|gb|EJF74561.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella alsatica IBS 382]
          Length = 260

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 37/178 (20%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE------PLKECKIVE 163
           N  V+DV GGTG     I+     K + T+LD +   L+  K++       PL     VE
Sbjct: 73  NWKVLDVAGGTGDIAFRILNASRQKVHATVLDINSSMLSAGKKRAQKNGLAPL--IDFVE 130

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGP 213
            +AE LPF     D Y  A  I   P   + +REA+RVLK GG+  C         ++  
Sbjct: 131 ANAEHLPFEDQSFDAYTIAFGIRNVPHIDKALREAFRVLKPGGRFLCLEFSNVEMPLLDK 190

Query: 214 VYPTFW-----------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +Y  FW                   RY  +    FPK++++      AGF  V  + +
Sbjct: 191 LY-DFWSFHTIPKLGQIIANDENAYRYLVESIRKFPKQDDFAHMINHAGFSRVSYRNL 247


>gi|289435280|ref|YP_003465152.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289171524|emb|CBH28068.1| 2-heptaprenyl-1, 4-naphthoquinonemethyltransferase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 237

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 36/170 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKEC-----KIVEGDAE 167
           V+DV  GT   ++ + + +  K +VT LD S + LA  ++K  LKE      ++V G+A 
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPKGHVTGLDFSDNMLAVGREK--LKEADVHNVELVHGNAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI--------------- 210
            LPFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI               
Sbjct: 109 SLPFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFN 167

Query: 211 -----IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
                + PV+  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 168 AYFRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|422416452|ref|ZP_16493409.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua FSL J1-023]
 gi|313623141|gb|EFR93407.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua FSL J1-023]
          Length = 237

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + L   ++K     L   +++ G+A +L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNIELIHGNAMEL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + PV+  F+   Y    W+      FP  E   E FQ+AGF  V+
Sbjct: 170 FRYVMPVFGKFFAKSYKEYSWLQESTREFPGMERLAEMFQEAGFSYVR 217


>gi|423616182|ref|ZP_17592016.1| hypothetical protein IIO_01508 [Bacillus cereus VD115]
 gi|401259147|gb|EJR65324.1| hypothetical protein IIO_01508 [Bacillus cereus VD115]
          Length = 239

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           V+++G GTG T   + K    K VT ++++   + KAK +   +   I  ++GDAE LP 
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAVEKNEIMIQKAKDRWLFERLNIQLIQGDAERLPC 99

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L+
Sbjct: 100 LND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQLY 158

Query: 232 P-----KEEEYIEWFQKAGFKDVQL 251
                  E E+++ FQKA FK + +
Sbjct: 159 GMKELLTENEWVQLFQKANFKRITI 183


>gi|443324767|ref|ZP_21053496.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
 gi|442795617|gb|ELS04975.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
          Length = 230

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKEC--KIVEGDAE 167
           N+ + D G GT   +L   + +D K  +T +D SP  L  A QK        +I + D  
Sbjct: 68  NLKICDCGIGTAAFSLAFAQTIDPKTQITGVDISPQMLKIAHQKLSQTNISHQIYQRDVR 127

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF 218
            LPF  +  D  +SA  +E+ P+P++G++E  RVL+  G   II    P F
Sbjct: 128 SLPFADECFDGVISAHVLEHLPNPEQGLKEIVRVLR-PGAPLIIAVTQPKF 177


>gi|240849718|ref|YP_002971106.1| ubiquinone/menaquinone biosynthesis [Bartonella grahamii as4aup]
 gi|240266841|gb|ACS50429.1| ubiquinone/menaquinone biosynthesis [Bartonella grahamii as4aup]
          Length = 260

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 33/173 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAK---QKEPLKEC-KIVEGDAED 168
           V+DV GGTG     I+     K + T+LD +   L+  K   QK  L      VE +AE+
Sbjct: 76  VLDVAGGTGDIAFRILNASRQKAHATVLDINGSMLSVGKKRAQKNGLAPLIDFVEANAEN 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVYPTFWLSRYFADV 227
           LPF     D Y  A  I   P   + +REA+RVLK GG+  C+        WL + + D+
Sbjct: 136 LPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNVEMPWLDKIY-DL 194

Query: 228 WML--------------------------FPKEEEYIEWFQKAGFKDVQLKRI 254
           W                            FPK++++    + AGF  V  + +
Sbjct: 195 WSFHAIPKLGQFIANDGDAYRYLVESIRKFPKQDDFAHMIKHAGFSRVSYRNL 247


>gi|295658626|ref|XP_002789873.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282834|gb|EEH38400.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 280

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  LA+ K++              
Sbjct: 74  ILDVAGGTGDIAFRMLDHAMNINNDHNTRVTIADINPDMLAEGKKRSLETPYYNTDRLAF 133

Query: 162 VEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           ++G+AE +P  P +  D Y  A  I  + D Q  + EA+RVLK GG  AC         +
Sbjct: 134 MQGNAESMPTIPDNSIDMYTVAFGIRNFTDKQAALNEAFRVLKPGGVFACLEFSKVTNGL 193

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
           +   Y  +  S                +Y  +    FP +EE+ +  QKAGF
Sbjct: 194 VDEWYKLWSFSAIPLIGQLVAGDRASYQYLVESIEKFPSQEEFRKMIQKAGF 245


>gi|81300217|ref|YP_400425.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
 gi|81169098|gb|ABB57438.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
          Length = 213

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G GTG     +        ++ LD S   LA A+QK P    K+  G+A +LPFP 
Sbjct: 48  VLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKLP-DSVKLQTGEANELPFPE 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D  +S     Y+ +P++ ++E  RVLK  G  C+I     T W   Y     ++   
Sbjct: 107 HHFDLVISTSVFHYFQNPEKVLQEITRVLKPQG--CLI----LTDWCRNY-----LMINL 155

Query: 234 EEEYIEWFQKAGFK 247
            + ++ W  KA  +
Sbjct: 156 LDRWLHWVDKAHVR 169


>gi|333911283|ref|YP_004485016.1| type 11 methyltransferase [Methanotorris igneus Kol 5]
 gi|333751872|gb|AEF96951.1| Methyltransferase type 11 [Methanotorris igneus Kol 5]
          Length = 211

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 84  YDHVINPGHWTEDMRDDALEPADLSN---RNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           YD +  P H     +D  +    L     R M ++DVG GTGF +L + +      V  +
Sbjct: 18  YDKI--PAHGVNSEKDKKVVKNALKEILKRKMKILDVGCGTGFLSLILAEL--GHEVVGI 73

Query: 141 DQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREA 198
           D S   L KA++K      + + + GDAE+LPF  +  D  V    +   P+P++ I+E 
Sbjct: 74  DLSEGMLNKAREKAKNLGLDIEFMVGDAENLPFEDNTFDAIVERHILWTLPNPKKAIKEW 133

Query: 199 YRVLKLGGKACII 211
            RVLK GGK  +I
Sbjct: 134 MRVLKDGGKIILI 146


>gi|163757772|ref|ZP_02164861.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Hoeflea phototrophica DFL-43]
 gi|162285274|gb|EDQ35556.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Hoeflea phototrophica DFL-43]
          Length = 265

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 31/167 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV   D +   T+LD +   L     +A +K      + VE +AE+L
Sbjct: 82  LDVAGGTGDIAFRIVAASDNQAQGTVLDINGSMLGVGAERAVKKGYAGNLEFVEANAEEL 141

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   PD  + +REAYRVL+ GG+  C         ++  +Y  + 
Sbjct: 142 PFEDNSFDAYTIAFGIRNVPDIDKALREAYRVLRRGGRFLCLEFSEVEMPLLDRIYDAWS 201

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
            +                +Y  +    FP+++++     +AGF  V 
Sbjct: 202 FNGIPAMGKAIAGDAEPYQYLVESIRKFPRQDDFAAMITRAGFSRVH 248


>gi|296823444|ref|XP_002850446.1| ubiquinone biosynthesis methyltransferase coq5 [Arthroderma otae
           CBS 113480]
 gi|238838000|gb|EEQ27662.1| ubiquinone biosynthesis methyltransferase coq5 [Arthroderma otae
           CBS 113480]
          Length = 318

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 43/200 (21%)

Query: 88  INPGHWTEDMRDDALEP--ADLSNRNMLVVDVGGGTGFTTLGI------VKHVDAKNVTI 139
           +NPG   +  R+  +E   +D +++   ++DV GGTG     +      +KH     VT+
Sbjct: 96  LNPGR--QYARESPVESGSSDAAHQGWNILDVAGGTGDIAFRMLDHATNIKHDQYTRVTV 153

Query: 140 LDQSPHQLAKAKQKE------PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQ 192
            D +P  LA+ K++              ++G+AE +P  P++  D Y  A  I  + + Q
Sbjct: 154 ADINPDMLAEGKKRSLDTPYYRTDRLSFMQGNAESMPSIPSNSVDLYTVAFGIRNFTNKQ 213

Query: 193 RGIREAYRVLKLGGK-AC---------IIGPVYPTFWLS----------------RYFAD 226
             + EAYR+LK GG  AC         ++  VY  +                   +Y  +
Sbjct: 214 AALEEAYRILKPGGVFACLEFSKVTVGVVDEVYKRWSFGAIPLIGQLVAGDRASYQYLVE 273

Query: 227 VWMLFPKEEEYIEWFQKAGF 246
               FP +E++    +KAGF
Sbjct: 274 SIERFPSQEQFRGMIRKAGF 293


>gi|220934885|ref|YP_002513784.1| type 11 methyltransferase [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219996195|gb|ACL72797.1| Methyltransferase type 11 [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 411

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSP---HQLAKAKQKEPLKECKIVEGDAEDL 169
           V+D+G G G  T+   +   ++ +V  LD +P    +L  A  +  +    +++G AE L
Sbjct: 79  VLDIGAGAGNDTVIASRIAGSEGHVIALDLTPAMTRKLKAACDQTAVANVSVLQGSAERL 138

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-----------PTF 218
           P      D   S G++   PD +R I E +RVL+ GG+  +   V            P  
Sbjct: 139 PLADGSVDSITSNGALNLVPDKRRAIGEMFRVLRPGGRVQLADVVIRRPVTVDCHEDPRL 198

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           W+             +E+ +  F+ AGF+DV++ R
Sbjct: 199 WVECVVGAT-----VDEDLLTMFRDAGFEDVEVVR 228


>gi|159184255|ref|NP_353351.2| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium fabrum str. C58]
 gi|335033053|ref|ZP_08526425.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Agrobacterium sp. ATCC 31749]
 gi|159139582|gb|AAK86136.2| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium fabrum str. C58]
 gi|333795729|gb|EGL67054.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Agrobacterium sp. ATCC 31749]
          Length = 258

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           ++DV GGTG     I++  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 74  ILDVAGGTGDVAFRIIEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  +          +  VY  +
Sbjct: 134 LPFEANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDMPLLDRVYDAW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 194 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRTAGFSRV 240


>gi|448628721|ref|ZP_21672402.1| 24-sterol C-methyltransferase [Haloarcula vallismortis ATCC 29715]
 gi|445757900|gb|EMA09230.1| 24-sterol C-methyltransferase [Haloarcula vallismortis ATCC 29715]
          Length = 227

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 26/174 (14%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDDGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y      
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEIARVLRPGGTAHIAVNYY------ 143

Query: 222 RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR-GVRRHGLIMGCSVT 274
                        EE +   +  GF D+++ R     YR   R  GL +    T
Sbjct: 144 -------------EENVHSHEWQGFIDIEMTRWSADEYRTAFREAGLAVASQDT 184


>gi|423562023|ref|ZP_17538299.1| hypothetical protein II5_01427 [Bacillus cereus MSX-A1]
 gi|401200910|gb|EJR07788.1| hypothetical protein II5_01427 [Bacillus cereus MSX-A1]
          Length = 239

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++G GTG T   + K    K VT ++++   + KAK +   E L   ++++GDAE LP
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAVEKNEIMIQKAKDRWLFERLN-VQLIQGDAERLP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
              D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L
Sbjct: 99  CLND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQL 157

Query: 231 FP-----KEEEYIEWFQKAGFKDVQL 251
           +       E E+++ FQKA FK + +
Sbjct: 158 YGMKELLTENEWVQLFQKANFKRITI 183


>gi|46201570|ref|ZP_00054798.2| COG0500: SAM-dependent methyltransferases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 218

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 13/155 (8%)

Query: 113 LVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAED 168
           +VVD+G G GF     V+ V ++  V  +D +   LAKA+    K  L   +   G+ E 
Sbjct: 35  VVVDLGSGAGFDAFLAVRQVGESGRVIGVDMTHEMLAKARANAAKLGLANVEFRLGEIEH 94

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI-----IGPVYPTF-WLSR 222
           LP   + AD  +S   I   PD    + +A+RVLK GG+  I     + P+ P    +  
Sbjct: 95  LPIADNTADVVISNCVINLSPDKPAVLNDAFRVLKPGGRVAISDVVMLRPLPPELAAMKE 154

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
                        E   W ++AGF D+   RI PK
Sbjct: 155 LLTGCAAGAATVAELSNWLEQAGFTDI---RIEPK 186


>gi|433461856|ref|ZP_20419455.1| methyltransferase [Halobacillus sp. BAB-2008]
 gi|432189569|gb|ELK46662.1| methyltransferase [Halobacillus sp. BAB-2008]
          Length = 225

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V D+G G G+ +  + +  +   VT +D S   + KA  +   +    V+GD   LPF  
Sbjct: 50  VADLGCGDGYGSFRLWQ--EGYEVTGVDLSKDMIDKANARVREQGLTFVQGDLTALPFED 107

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPV 214
           D  D  ++  S+E+   P +G+ E  R+LKLGG+ CI  +GP 
Sbjct: 108 DSFDSAMAVNSLEWTEIPSQGLNEMKRILKLGGRLCIALLGPT 150


>gi|292656988|ref|YP_003536885.1| methyl transferase-like protein [Haloferax volcanii DS2]
 gi|291370809|gb|ADE03036.1| methyl transferase-like protein [Haloferax volcanii DS2]
          Length = 193

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPA-DLSNRNM-LVVDVGGGTGFTTLGIVKHV 132
           +F RF + VYD V+ P          ALE A D ++R++  VVD+GGG+G  TL +    
Sbjct: 9   FFDRF-APVYDLVMPPADPG------ALETALDRADRDVERVVDIGGGSGRATLAL---- 57

Query: 133 DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
           D     +LD+S   L +A+ +    +C  V GDA  LPF  D  D      +  + P+ Q
Sbjct: 58  DVPERIVLDRSAGMLRRARGRG--LDC--VRGDARKLPFADDSLDAVTVVDAFHHMPN-Q 112

Query: 193 RGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKAG 245
           RG+  E +RVL  GG    +    P   L R       +      F   +E + + ++ G
Sbjct: 113 RGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFATPDELVRFLERVG 171

Query: 246 FKDVQLKR 253
           F+   ++R
Sbjct: 172 FEAAVVER 179


>gi|218898675|ref|YP_002447086.1| hypothetical protein BCG9842_B1625 [Bacillus cereus G9842]
 gi|228902080|ref|ZP_04066244.1| Methyltransferase type 11 [Bacillus thuringiensis IBL 4222]
 gi|434376639|ref|YP_006611283.1| hypothetical protein BTF1_15960 [Bacillus thuringiensis HD-789]
 gi|218540859|gb|ACK93253.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|228857506|gb|EEN02002.1| Methyltransferase type 11 [Bacillus thuringiensis IBL 4222]
 gi|401875196|gb|AFQ27363.1| hypothetical protein BTF1_15960 [Bacillus thuringiensis HD-789]
          Length = 239

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++G GTG T   + K    K VT ++++   + KAK +   E L   ++++GDAE LP
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAVEKNEIMIQKAKDRWLFERLN-VQLIQGDAERLP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
              D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L
Sbjct: 99  CLND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQL 157

Query: 231 FP-----KEEEYIEWFQKAGFKDVQL 251
           +       E E+++ FQKA FK + +
Sbjct: 158 YGMKELLTENEWVQLFQKANFKRITI 183


>gi|336324274|ref|YP_004604241.1| type 11 methyltransferase [Flexistipes sinusarabici DSM 4947]
 gi|336107855|gb|AEI15673.1| Methyltransferase type 11 [Flexistipes sinusarabici DSM 4947]
          Length = 253

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVE---GDAED 168
           ++VD+G G G       +    +   I +D +   L KA++       K VE   GD E+
Sbjct: 70  IIVDLGSGAGNDLFIARRFTGEEGYCIGIDMTEEMLKKAEENNNKLGYKNVEFRLGDIEN 129

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           +P   + AD  +S   I   PD  +  +E YR+LK GGK CI   V          + V 
Sbjct: 130 IPVDENMADIVISNCVINLVPDKNKAFQEIYRILKPGGKFCISDIVIEGEMPDEIRSSVE 189

Query: 229 MLFP------KEEEYIEWFQKAGFKD---VQLKRIGPK 257
           M          ++EY++  + AGF D   V+LK++  K
Sbjct: 190 MYVGCVAGAISKKEYLDIIKSAGFSDVEIVELKKLNSK 227


>gi|448568149|ref|ZP_21637726.1| methyl transferase-like protein [Haloferax lucentense DSM 14919]
 gi|445727099|gb|ELZ78713.1| methyl transferase-like protein [Haloferax lucentense DSM 14919]
          Length = 193

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPA-DLSNRNM-LVVDVGGGTGFTTLGIVKHV 132
           +F RF + VYD V+ P          ALE A D ++R++  VVD+GGG+G  TL +    
Sbjct: 9   FFDRF-APVYDLVMPPADPG------ALETALDRADRDVERVVDIGGGSGRATLAL---- 57

Query: 133 DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
           D     +LD+S   L +A+ +    +C  V GDA  LPF  D  D      +  + P+ Q
Sbjct: 58  DVPERIVLDRSAGMLRRARGRG--LDC--VRGDARGLPFADDALDAVTVVDAFHHMPN-Q 112

Query: 193 RGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKAG 245
           RG+  E +RVL  GG    +    P   L R       +      F   +E + + ++ G
Sbjct: 113 RGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFAAPDELVRFLERVG 171

Query: 246 FKDVQLKR 253
           F+   ++R
Sbjct: 172 FEAAVVER 179


>gi|182679818|ref|YP_001833964.1| ubiquinone/menaquinone biosynthesis methyltransferase [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182635701|gb|ACB96475.1| ubiquinone/menaquinone biosynthesis methyltransferase [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 259

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKN-VTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     + +    K  VT+LD +   L     +AK++        VE +AEDL
Sbjct: 76  LDVAGGTGDIAFRVARAGTPKTEVTVLDINGDMLEVGRERAKKRGLADRLTFVEANAEDL 135

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
           PFP++  D Y  A  I   P   + + EA+RVLK GG   C+         +  +Y T+ 
Sbjct: 136 PFPSNTFDAYTIAFGIRNVPRIPQALSEAFRVLKRGGHFLCLEFSHVDIPGLDRLYETYS 195

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                             RY  +    FP  E + +   +AGF      R+
Sbjct: 196 FRAIPLIGQFVTGDAESYRYLVESIRRFPDAELFADMIAEAGFARPSFTRL 246


>gi|324513254|gb|ADY45451.1| Ubiquinone biosynthesis methyltransferase coq-5 [Ascaris suum]
          Length = 289

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 35/180 (19%)

Query: 110 RNMLVVDVGGGTGFTTLGIV----KHVDAKNVTILDQSPHQL----AKAKQKEPLKECKI 161
           RN  ++DV GGTG      V    K + + +VTI D + + L     +A +   + + ++
Sbjct: 93  RNTTLLDVAGGTGDIAFRAVRKIQKGISSGSVTICDINQNMLDVGQMRADKDRSIDKSRL 152

Query: 162 --VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC--------- 209
             + GDAE LPF  +  D Y  A  I       + ++EAYRVL+ GGK AC         
Sbjct: 153 KWICGDAESLPFKENSFDLYTIAFGIRNCTHVDKVLQEAYRVLRPGGKFACLEFSEIASP 212

Query: 210 --------------IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                         ++G V    + S RY  +    FPK+ E+ +  + A F +V+ + +
Sbjct: 213 LRRFYDFYSFQIIPVMGQVIAGDYNSYRYLVESIRKFPKQVEFSKMIEDAKFTEVRYENL 272


>gi|300864508|ref|ZP_07109372.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
 gi|300337466|emb|CBN54520.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
          Length = 223

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 9/111 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+  G+G TT  ++++  +++VT LD SP  L +AK+  P    + VE  AE++PFP 
Sbjct: 49  ILDLCCGSGQTTQFLIQY--SQDVTGLDASPLSLKRAKKNVP--SAQYVEAFAEEMPFPD 104

Query: 174 DYADR-YVSAGSIEYWP-DPQRGIREAYRVLKLGGKACIIG---PVYPTFW 219
           +Y D  + SA   E  P   Q+ ++E YRVLK  G   ++    P  P FW
Sbjct: 105 NYFDLVHTSAAMHEMQPMQLQQILQEVYRVLKPEGIFTLVDFHRPTNPIFW 155


>gi|270157389|ref|ZP_06186046.1| biotin synthesis protein BioC [Legionella longbeachae D-4968]
 gi|269989414|gb|EEZ95668.1| biotin synthesis protein BioC [Legionella longbeachae D-4968]
          Length = 265

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           ++DVG GTG T +   +      V+ LD SP  L KA+    L +  I   EGD E LP+
Sbjct: 45  ILDVGCGTGVTAVTAARM--GARVSALDLSPALLEKAELNAQLAQVIIDFKEGDVEQLPY 102

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT-FWLSRYFADVWML 230
           P    D  +S     + P+ Q+ I E  RVLK GG   I    +PT  ++ + FA +   
Sbjct: 103 PDASFDTVLSQFGHMFAPNAQKAIDEMLRVLKPGG--VIAFTTWPTEHFIGQLFALISKY 160

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLI 268
            P    +I+  +K G  D    R+G +   G   +G++
Sbjct: 161 NPL-PHHIDLPEKWGEPDYIKYRLGNRITNGCFDYGIM 197


>gi|220908408|ref|YP_002483719.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219865019|gb|ACL45358.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 263

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKECKIVEGDAEDLPF 171
           ++D+G GTG  TL + + V    VT LD SP+ L++A  K +    E + V+G+AE   F
Sbjct: 102 ILDLGCGTGTATLMLKQAVPRAEVTGLDLSPYMLSRAIHKTRAAGLEVEFVQGNAECTHF 161

Query: 172 PTDYADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACII-GPVYPTFWLSRY---FA 225
            T+  D  V++  +   P    Q  +RE +R+L +GG+  I+ G  +    L+R+   F 
Sbjct: 162 ATESFDLVVASFLLHETPALVSQAILRECHRLLSVGGRLVILDGHQHNLRGLTRWDHLFG 221

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGL 267
           + ++          W + AG   V+ +   P W+     HGL
Sbjct: 222 EPYLQDYSWNSTNAWMEAAGLTGVKTE---PIWWLYQLSHGL 260


>gi|83719907|ref|YP_441426.1| UbiE/COQ5 family methlytransferase [Burkholderia thailandensis
           E264]
 gi|167618300|ref|ZP_02386931.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
           thailandensis Bt4]
 gi|257139899|ref|ZP_05588161.1| UbiE/COQ5 family methlytransferase [Burkholderia thailandensis
           E264]
 gi|83653732|gb|ABC37795.1| methlytransferase, UbiE/COQ5 family [Burkholderia thailandensis
           E264]
          Length = 251

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +   A  V   D +P  LA    A ++  L   +I +G AE LP
Sbjct: 45  VLDLGCGAGHASFAAARG-GATEVIAYDLAPQMLATVEAAARERGLASVRIEQGAAERLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSRYFADV 227
           F     D  VS  S  +W D  R + EA RVLK GG+A    I G  +P   +  +   V
Sbjct: 104 FADASFDWIVSRMSAHHWRDVPRALAEARRVLKPGGRALFVDIAGADHPL--VDTHLQTV 161

Query: 228 WMLFP-------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
            +L         + +E++ +F +AGF    + R+  +W
Sbjct: 162 EVLRDASHVRDYRADEWLAFFARAGF----VARVRERW 195


>gi|56750156|ref|YP_170857.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
 gi|56685115|dbj|BAD78337.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
          Length = 211

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G GTG     +        ++ LD S   LA A+QK P    K+  G+A +LPFP 
Sbjct: 46  VLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKLP-DSVKLQTGEANELPFPE 104

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D  +S     Y+ +P++ ++E  RVLK  G  C+I     T W   Y     ++   
Sbjct: 105 HHFDLVISTSVFHYFQNPEKVLQEITRVLKPQG--CLI----LTDWCRNY-----LMINL 153

Query: 234 EEEYIEWFQKAGFK 247
            + ++ W  KA  +
Sbjct: 154 LDRWLHWVDKAHVR 167


>gi|422320742|ref|ZP_16401798.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Achromobacter xylosoxidans C54]
 gi|317404464|gb|EFV84876.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Achromobacter xylosoxidans C54]
          Length = 258

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 67/172 (38%), Gaps = 38/172 (22%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAK--------NVTILDQSPHQLAKAKQKEPLKECKIVE 163
           M V+D+ GGTG       K             N ++L     +LA A Q  P   C    
Sbjct: 74  MKVLDIAGGTGDLAKAFAKRAGPTGEVWLTDINDSMLRVGRDRLADAGQLVPTAVC---- 129

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPT 217
            DAE LPFPT Y DR   A  +       R + E  RVLK GGK  ++       P+ P 
Sbjct: 130 -DAERLPFPTGYFDRVSVAFGLRNMTHKDRALAEMTRVLKPGGKLLVLEFSRIAKPLAPA 188

Query: 218 F---------WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           +         WL           RY A+   + P +E   +  + AG + VQ
Sbjct: 189 YDWYSFNVLPWLGKTVAKDEASYRYLAESIRMHPDQETLADMLRTAGLERVQ 240


>gi|295132803|ref|YP_003583479.1| ubiquinone/menaquinone biosynthesis methyltransferase [Zunongwangia
           profunda SM-A87]
 gi|294980818|gb|ADF51283.1| ubiquinone/menaquinone biosynthesis methyltransferase [Zunongwangia
           profunda SM-A87]
          Length = 243

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 22/163 (13%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK----IVEGDAEDL 169
           V+D+  GTG   + I +  +AK +  LD S   L   ++K   K  +    +++GD+E L
Sbjct: 61  VLDIATGTGDLAIQIAEAANAKKIVGLDLSEGMLKVGRKKIMSKNLQTKIEMIQGDSEAL 120

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWL 220
           PF  +  D    A  +  +   + G+ E YRVLK GG   ++    PT         F+ 
Sbjct: 121 PFDDNSFDVITVAFGVRNFETLELGLSEIYRVLKKGGLFIVLETSVPTKFPFKQGYKFYS 180

Query: 221 SRYFADVWMLFPKEEEYIEWFQKAG--------FKDVQLKRIG 255
           S     +  LF K++E   +  K+         F ++ LK+IG
Sbjct: 181 SFILPTIGKLFSKDKEAYTYLSKSAAEFPYGEKFNNI-LKKIG 222


>gi|352106609|ref|ZP_08961552.1| phosphatidyl-N-methylethanolamine N-methyltransferase /
           phosphatidylethanolamine N-methyltransferase [Halomonas
           sp. HAL1]
 gi|350597652|gb|EHA13780.1| phosphatidyl-N-methylethanolamine N-methyltransferase /
           phosphatidylethanolamine N-methyltransferase [Halomonas
           sp. HAL1]
          Length = 210

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 9/109 (8%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK-AKQKEPLK---ECKIVEGDAE 167
           M V+ VG GTG     + + ++   +   D +P  + + AK+ E L+   EC+++  DAE
Sbjct: 44  MRVLLVGAGTGLDLPFLPQDIE---LHATDLAPAMVKRTAKRAETLRRDVECRVM--DAE 98

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
            L +P ++ D  +    I   P+PQRG+ EA+RVLK GG+ C++    P
Sbjct: 99  ALNYPDEHFDAVIMHLIIAVMPNPQRGLAEAHRVLKPGGQLCVMDKFQP 147


>gi|289164215|ref|YP_003454353.1| SAM dependent methyltransferase [Legionella longbeachae NSW150]
 gi|288857388|emb|CBJ11216.1| putative SAM dependent methyltransferase [Legionella longbeachae
           NSW150]
          Length = 326

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           ++DVG GTG T +   +      V+ LD SP  L KA+    L +  I   EGD E LP+
Sbjct: 106 ILDVGCGTGVTAVTAARM--GARVSALDLSPALLEKAELNAQLAQVIIDFKEGDVEQLPY 163

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT-FWLSRYFADVWML 230
           P    D  +S     + P+ Q+ I E  RVLK GG   I    +PT  ++ + FA +   
Sbjct: 164 PDASFDTVLSQFGHMFAPNAQKAIDEMLRVLKPGG--VIAFTTWPTEHFIGQLFALISKY 221

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLI 268
            P    +I+  +K G  D    R+G +   G   +G++
Sbjct: 222 NPL-PHHIDLPEKWGEPDYIKYRLGNRITNGCFDYGIM 258


>gi|448683936|ref|ZP_21692556.1| 24-sterol C-methyltransferase [Haloarcula japonica DSM 6131]
 gi|445783509|gb|EMA34338.1| 24-sterol C-methyltransferase [Haloarcula japonica DSM 6131]
          Length = 227

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A++         
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNAREYTDDDGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y     S
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYAGDPPHTLEEIARVLRPGGTAHIAVNYYEENVHS 149

Query: 222 ---RYFADVWMLFPKEEEYIEWFQKAGF 246
              + F D+ M      EY E F++AG 
Sbjct: 150 HEWQEFIDIEMTRWSGPEYREAFREAGL 177


>gi|440225311|ref|YP_007332402.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           tropici CIAT 899]
 gi|440036822|gb|AGB69856.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           tropici CIAT 899]
          Length = 258

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  +   + T+LD +   LA    +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASNRLAHATVLDINGSMLAVGAERAEKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  ++
Sbjct: 134 LPFEPNSFDAYTIAFGIRNVPRIDVALKEAYRVLKRGGRLLVL 176


>gi|310821604|ref|YP_003953962.1| ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394676|gb|ADO72135.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
           aurantiaca DW4/3-1]
          Length = 244

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLK-ECKIVEGDAEDL 169
           V+D+  GTG   L ++KH     V  LD S   +   ++K   E L  +C++  GDA+ L
Sbjct: 60  VLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAKCELKLGDAQSL 119

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII-------GPVYPTF---- 218
           PF     D    A  I   PD  R +RE  RV + GG+  I+       G + P      
Sbjct: 120 PFEDQSFDGICMAFGIRNVPDRPRALREMARVTRPGGRIAILELSEPRNGLLSPLLRFQI 179

Query: 219 -----WLS---------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                WL          RY  +    FP+ E + +  +++G + +Q+ R+
Sbjct: 180 RKVVPWLGAQLSGSGEYRYLQESIAAFPQPEAFADIMRESGLEVLQVHRL 229


>gi|432434757|ref|ZP_19677167.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE188]
 gi|432522351|ref|ZP_19759495.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE230]
 gi|433211127|ref|ZP_20394749.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE99]
 gi|430967984|gb|ELC85224.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE188]
 gi|431055514|gb|ELD65059.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE230]
 gi|431736421|gb|ELJ99748.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE99]
          Length = 256

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G  E LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYVESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LKLGGK  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKLGGKLIVMDVMSP 151


>gi|26246154|ref|NP_752193.1| hypothetical protein c0247 [Escherichia coli CFT073]
 gi|227884789|ref|ZP_04002594.1| methyltransferase YafE [Escherichia coli 83972]
 gi|331656200|ref|ZP_08357162.1| putative biotin synthesis protein [Escherichia coli TA206]
 gi|386627730|ref|YP_006147450.1| hypothetical protein i02_0229 [Escherichia coli str. 'clone D i2']
 gi|386632650|ref|YP_006152369.1| hypothetical protein i14_0229 [Escherichia coli str. 'clone D i14']
 gi|386637565|ref|YP_006104363.1| methyltransferase YafE [Escherichia coli ABU 83972]
 gi|417151530|ref|ZP_11991057.1| methyltransferase domain protein [Escherichia coli 1.2264]
 gi|419913234|ref|ZP_14431675.1| methyltransferase YafE [Escherichia coli KD1]
 gi|422365157|ref|ZP_16445660.1| methyltransferase domain protein [Escherichia coli MS 153-1]
 gi|432410210|ref|ZP_19652896.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE39]
 gi|432454986|ref|ZP_19697197.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE201]
 gi|432494035|ref|ZP_19735857.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE214]
 gi|432510440|ref|ZP_19749300.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE220]
 gi|432567082|ref|ZP_19803611.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE53]
 gi|432591211|ref|ZP_19827543.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE60]
 gi|432606073|ref|ZP_19842273.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE67]
 gi|432649577|ref|ZP_19885347.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE87]
 gi|432782096|ref|ZP_20016282.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE63]
 gi|432976912|ref|ZP_20165739.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE209]
 gi|432993965|ref|ZP_20182585.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE218]
 gi|432998384|ref|ZP_20186933.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE223]
 gi|433056536|ref|ZP_20243634.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE124]
 gi|433085860|ref|ZP_20272268.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE137]
 gi|433114145|ref|ZP_20299968.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE153]
 gi|433123807|ref|ZP_20309404.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE160]
 gi|433137877|ref|ZP_20323168.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE167]
 gi|433147627|ref|ZP_20332711.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE174]
 gi|442606044|ref|ZP_21020848.1| SAM-dependent methyltransferase YafE (UbiE paralog) [Escherichia
           coli Nissle 1917]
 gi|26106551|gb|AAN78737.1|AE016755_237 Hypothetical protein yafE [Escherichia coli CFT073]
 gi|227838230|gb|EEJ48696.1| methyltransferase YafE [Escherichia coli 83972]
 gi|307552057|gb|ADN44832.1| probable methyltransferase YafE [Escherichia coli ABU 83972]
 gi|315292136|gb|EFU51488.1| methyltransferase domain protein [Escherichia coli MS 153-1]
 gi|331054448|gb|EGI26457.1| putative biotin synthesis protein [Escherichia coli TA206]
 gi|355418629|gb|AER82826.1| hypothetical protein i02_0229 [Escherichia coli str. 'clone D i2']
 gi|355423549|gb|AER87745.1| hypothetical protein i14_0229 [Escherichia coli str. 'clone D i14']
 gi|386159721|gb|EIH21535.1| methyltransferase domain protein [Escherichia coli 1.2264]
 gi|388389938|gb|EIL51446.1| methyltransferase YafE [Escherichia coli KD1]
 gi|430938791|gb|ELC59021.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE39]
 gi|430986267|gb|ELD02839.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE201]
 gi|431029809|gb|ELD42840.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE214]
 gi|431032583|gb|ELD45293.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE220]
 gi|431103376|gb|ELE08028.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE53]
 gi|431133570|gb|ELE35550.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE60]
 gi|431142341|gb|ELE44091.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE67]
 gi|431194863|gb|ELE94078.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE87]
 gi|431331808|gb|ELG19051.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE63]
 gi|431483870|gb|ELH63559.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE209]
 gi|431510748|gb|ELH88990.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE218]
 gi|431515652|gb|ELH93469.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE223]
 gi|431575090|gb|ELI47838.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE124]
 gi|431610544|gb|ELI79833.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE137]
 gi|431637458|gb|ELJ05520.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE153]
 gi|431650743|gb|ELJ18056.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE160]
 gi|431665644|gb|ELJ32360.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE167]
 gi|431678883|gb|ELJ44802.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE174]
 gi|441712895|emb|CCQ06825.1| SAM-dependent methyltransferase YafE (UbiE paralog) [Escherichia
           coli Nissle 1917]
          Length = 256

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G  E LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYVESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LKLGGK  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKLGGKLIVMDVMSP 151


>gi|428299231|ref|YP_007137537.1| type 11 methyltransferase [Calothrix sp. PCC 6303]
 gi|428235775|gb|AFZ01565.1| Methyltransferase type 11 [Calothrix sp. PCC 6303]
          Length = 211

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+G GTG     ++K      +  LD S   L  A+QK P     +  G A  +PF +
Sbjct: 46  ILDLGCGTGTLIQNLLKVAPETEIVGLDPSAEMLNVARQKLP-AAIDLKVGSATSIPFSS 104

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV--YPTFWL----SRYFADV 227
           +  D  +S  +  Y+P+P   I+E  RVLK GG   I      Y T  +     R F   
Sbjct: 105 NSFDVLISTSAFHYFPNPDLAIQEMQRVLKPGGFLLITDWCHDYRTCQILDLALRMFNRA 164

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGV 262
                +  E     Q AG  +V ++R    W+ G+
Sbjct: 165 HFRTYRVSECQNMLQDAGLDEVVIERYKIDWFWGM 199


>gi|126730151|ref|ZP_01745963.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Sagittula stellata E-37]
 gi|126709531|gb|EBA08585.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Sagittula stellata E-37]
          Length = 250

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGD 165
           R   ++DV GGTG  +   +K     + T+LD +   L + +++       ++   V GD
Sbjct: 63  RGTKLLDVAGGTGDISFRYLKRAGGGHATVLDLTEPMLVEGRKRAEAASLGEQLDWVVGD 122

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           A  LPFP +  D Y  +  I     PQ  + EAYRVL+ GG+  ++
Sbjct: 123 AMKLPFPDNSFDVYTISFGIRNVTRPQEALNEAYRVLRPGGRLMVL 168


>gi|383825651|ref|ZP_09980796.1| methyltransferase type 11 [Mycobacterium xenopi RIVM700367]
 gi|383334108|gb|EID12550.1| methyltransferase type 11 [Mycobacterium xenopi RIVM700367]
          Length = 247

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 7/155 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+DVG G    T  +   V A+ + + +D S   L++A + +   +   +  DA+ LP  
Sbjct: 94  VLDVGCGPASITASLAHAVGAEGLVLGVDLSEAMLSRAARTQWGPQVGFLRADAQQLPLR 153

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV---YPTFWLSRYFADVWM 229
               D  VS   ++  P+P   + E  RVL+ GG+  ++ P        W  R   D+  
Sbjct: 154 DQTVDAVVSIAVLQLVPNPAAALAEMARVLRPGGRLAVMVPTAGRAARLW--RVLPDIGA 211

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRGVR 263
               E+E  +  +  GF  V+ K +G  +W R  R
Sbjct: 212 YVFGEDEIADILEDHGFVSVRTKVVGTFQWVRAKR 246


>gi|383761028|ref|YP_005440010.1| putative methyltransferase [Caldilinea aerophila DSM 14535 = NBRC
           104270]
 gi|381381296|dbj|BAL98112.1| putative methyltransferase [Caldilinea aerophila DSM 14535 = NBRC
           104270]
          Length = 260

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 11/145 (7%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED 168
            R +L V  G G G   LG++  V A+++   D S   LA A Q    K+  +   DA+ 
Sbjct: 36  GRRVLEVACGAGVG---LGLLIGV-ARSLAACDYSTSTLALAHQSVG-KQVMLTAADAQQ 90

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPVYPTFWLSRYFAD 226
           LP+ T   D  +S  +I Y P P   + E +R+L  GG+  +    P +P F        
Sbjct: 91  LPYATGAFDLILSFEAIYYLPQPAAFLSECHRLLSSGGRLLVSTSNPHWPFF----VPGA 146

Query: 227 VWMLFPKEEEYIEWFQKAGFKDVQL 251
           + + +P   E     QKAGF++V L
Sbjct: 147 LSVHYPSVPELAHLLQKAGFQNVAL 171


>gi|333896102|ref|YP_004469976.1| methyltransferase type 11 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|333111367|gb|AEF16304.1| Methyltransferase type 11 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 209

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKA---KQKEPLKECKIVEGDAEDL 169
           V+D+G G G   L   K +  + + + LD +   + +A   ++K  +K  + V GD E +
Sbjct: 39  VLDLGCGRGNDVLNAAKIIGERGIAVGLDLTEKMIEEAEKNRKKLNIKNAEFVVGDVESI 98

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY-----------PTF 218
           P  ++  D  +S   I +  D +R  +E YRVLK GG+  +   V            P  
Sbjct: 99  PLESEKFDVVISDCVINHAKDKERVYKEIYRVLKAGGRFIVSDVVSKDRLPDEIVNDPEA 158

Query: 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           W     AD +     EE+YI+    AGFK+++
Sbjct: 159 W-----ADCFGGAIPEEDYIKAINNAGFKEIE 185


>gi|448680449|ref|ZP_21690766.1| 24-sterol C-methyltransferase [Haloarcula argentinensis DSM 12282]
 gi|445768893|gb|EMA19970.1| 24-sterol C-methyltransferase [Haloarcula argentinensis DSM 12282]
          Length = 227

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 26/174 (14%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       V+D+G G+G+    +    DA     LD SP  L  A+          
Sbjct: 36  VEPGDT------VLDLGTGSGYALRALRDTNDAGPCYGLDGSPEMLRNARDYTDDDGIGF 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS 221
           + GD + LPF TD  D   S  +  Y  DP   + E  RVL+ GG A I    Y      
Sbjct: 90  LRGDFDALPFATDSIDHVFSMEAFYYASDPPHTLEEITRVLRPGGTAHIAVNYY------ 143

Query: 222 RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR-IGPKWYRGVRRHGLIMGCSVT 274
                        EE +   +   F D+++ R  GP++    R  GL +    T
Sbjct: 144 -------------EENVHSHEWQDFIDIEMTRWSGPEYREAFREAGLAVAAQDT 184


>gi|346226865|ref|ZP_08848007.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Anaerophaga thermohalophila DSM 12881]
          Length = 240

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 31/165 (18%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC----KIVEGDAED 168
           L++DV  GTG   + I K +D   V  LD S   LA A++K   +      ++  GD+E+
Sbjct: 57  LILDVATGTGDLAIQIAK-IDPIAVYALDLSEEMLAIAREKIEKRRLHTTIQLKHGDSEE 115

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FW 219
           LPF  ++ D    A  +  + + Q+G+ E +RVL+  G+  ++    P          F+
Sbjct: 116 LPFGNNFFDAATVAFGVRNFENLQKGLSEIHRVLRQDGRLVVLEFSRPKKFPLKQLYHFY 175

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFK 247
           ++R                 Y  +  + FP  +++ +  QKAGF+
Sbjct: 176 ITRILPWWGGIISHDKDAYSYLPESALQFPDGKDFTKELQKAGFE 220


>gi|311071085|ref|YP_003976008.1| methyltransferase [Bacillus atrophaeus 1942]
 gi|419822976|ref|ZP_14346541.1| putative methyltransferase [Bacillus atrophaeus C89]
 gi|310871602|gb|ADP35077.1| putative methyltransferase [Bacillus atrophaeus 1942]
 gi|388472943|gb|EIM09701.1| putative methyltransferase [Bacillus atrophaeus C89]
          Length = 250

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 24/158 (15%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL 169
           R+ +V++VG G G++   ++K      +  +D S     +A++K   +  ++++G  E +
Sbjct: 95  RHDVVLEVGYGPGYSLKQMLKREPTVKIDGIDASGVMKKQAERKVKQRSVRLMKGGIETV 154

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--------IGPVYPTFWLS 221
           P P+ Y D+ +S  +   W D Q+G+   Y+ LK GGK  I          P     +  
Sbjct: 155 PLPSAYYDKVLSVNNYTIWNDRQKGVNHIYQALKPGGKTAISMQPREADASPEKTKAFAK 214

Query: 222 RYFADVWMLFPKEEEYIEWFQKAGFKD--VQLKRIGPK 257
           + +AD++               AGF+D  +Q K I P+
Sbjct: 215 QIYADLYA--------------AGFEDIEIQFKYITPE 238


>gi|114321580|ref|YP_743263.1| biotin biosynthesis protein BioC [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227974|gb|ABI57773.1| biotin biosynthesis protein BioC [Alkalilimnicola ehrlichii MLHE-1]
          Length = 291

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPF 171
           ++VDVG GTGF T  +  H     V  LD +P  L   +++   L+  + + GDAE LP 
Sbjct: 49  IIVDVGCGTGFCTRALQDHYRKARVIGLDHAPSMLRATRRRGRWLRPIRTLCGDAERLPL 108

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
             +  D   S  ++++ PD  R   E  RVL+ GG
Sbjct: 109 AAESVDMVFSNLALQWMPDLHRVFAEFQRVLRPGG 143


>gi|116754726|ref|YP_843844.1| methyltransferase type 11 [Methanosaeta thermophila PT]
 gi|116666177|gb|ABK15204.1| Methyltransferase type 11 [Methanosaeta thermophila PT]
          Length = 262

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQ---KEPLKECKIVEGD 165
           R   V+D+G G GF      + V  + + I +D +   + +A++   K   +     +G+
Sbjct: 76  RGEYVLDMGSGAGFDCFLAARAVGPEGMVIGVDMTSEMVDRARENARKGGYRNVDFRQGE 135

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY----PTFWLS 221
            E+LP   +Y D  +S   I   PD +R  REA+RVLK GG+  I   V     P     
Sbjct: 136 LENLPVADNYVDVIMSNCVINLVPDKRRVFREAFRVLKPGGRLIISDIVLKREIPEAVRR 195

Query: 222 RYFADVWMLFPK--EEEYIEWFQKAGFKDVQL 251
              A V  L      EEYI+  + AGF+++ +
Sbjct: 196 SKEAYVGCLAGAVTVEEYIDAMRSAGFEEISI 227


>gi|254569176|ref|XP_002491698.1| 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase
           [Komagataella pastoris GS115]
 gi|238031495|emb|CAY69418.1| 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase
           [Komagataella pastoris GS115]
 gi|328351797|emb|CCA38196.1| ubiquinone biosynthesis methyltransferase COQ5 [Komagataella
           pastoris CBS 7435]
          Length = 294

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 42/188 (22%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQLAKAKQ 152
           D  + P   ++R +  +DV GGTG    G++ H   K       +T+ D +P  L + ++
Sbjct: 86  DAGMRPG--TDRPLAFLDVAGGTGDIAFGLLDHAKHKFQDIQSTMTVADINPDMLMEGER 143

Query: 153 KEPLK-------ECKIVEGDAEDLPFPTDYA-DRYVSAGSIEYWPDPQRGIREAYRVLKL 204
           +  ++         + +E + E L    D + D Y  A  I  + D Q G+  AYRVLK 
Sbjct: 144 RCVVQTSYGRSPRIQFLEQNGETLDKIEDNSKDVYTIAFGIRNFTDIQAGLNTAYRVLKP 203

Query: 205 GGK-AC---------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYI 238
           GG  AC         ++  VY T+  S                +Y  +    FPK+EE+ 
Sbjct: 204 GGVFACLEFSHVDNSLVDTVYQTYSFSLLPLMGQLVANDRDSYQYLVESIRKFPKQEEFA 263

Query: 239 EWFQKAGF 246
              +KAGF
Sbjct: 264 GMVRKAGF 271


>gi|428223508|ref|YP_007107605.1| type 11 methyltransferase [Geitlerinema sp. PCC 7407]
 gi|427983409|gb|AFY64553.1| Methyltransferase type 11 [Geitlerinema sp. PCC 7407]
          Length = 209

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+  G+G TT  +V+   +++VT LD SP  L +A++  P  +   V+  AE +PFP 
Sbjct: 49  VLDLCCGSGQTTQFLVQR--SRHVTGLDASPRSLQRAQRNVP--QAAYVQAFAEKMPFPE 104

Query: 174 DYADR-YVSAGSIEYWPDPQRGI-REAYRVLKLGGKACIIG---PVYPTFW 219
              D  + SA   E  PD  R I  E YRVLK GG   +I    P  P FW
Sbjct: 105 AQFDLVHTSAALHEMAPDQLRQIVAEVYRVLKPGGYFALIDLHQPTNPVFW 155


>gi|304390129|ref|ZP_07372083.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304326611|gb|EFL93855.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 230

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 30/167 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DV  GTG +++  V+      V  +D S   +A+ +++ P  E    +GDA +L FP 
Sbjct: 54  VLDVAAGTGASSIEFVR--AGAKVVAVDFSEGMIAEGRRRHP--EIDFQQGDAMNLDFPD 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---------FWLSR-- 222
           +  D    +  +    D  R +RE YRV++ GG   +     PT         F+L R  
Sbjct: 110 NTFDCVTISFGLRNVSDLDRALREFYRVVRPGGHVVVCEFSRPTFAPFRAVYRFFLHRVM 169

Query: 223 ---------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          Y A+  + +P + ++    + AGF+ +QLK +
Sbjct: 170 PPIARLFSTDAVAYDYLAESILAWPSQYQFAAHLRAAGFERLQLKNL 216


>gi|255527150|ref|ZP_05394036.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
 gi|296187808|ref|ZP_06856202.1| arsenite S-adenosylmethyltransferase [Clostridium carboxidivorans
           P7]
 gi|255509151|gb|EET85505.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
 gi|296047765|gb|EFG87205.1| arsenite S-adenosylmethyltransferase [Clostridium carboxidivorans
           P7]
          Length = 272

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 14/161 (8%)

Query: 104 PADLSN--RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLA---KAKQKEPLK 157
           P  L+N  +  +V+D+G G G       K+V D+  V  LD +   L    K K+K  +K
Sbjct: 67  PVVLANPQKGEVVLDLGSGGGIDVFISSKYVGDSGKVYGLDMTDEMLELANKNKEKMKVK 126

Query: 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
             + ++G  ED+P   +  D   S   I      +  ++EAYRVLK GG+  I   V   
Sbjct: 127 NVEFLKGYIEDIPLGNESIDVITSNCVINLCESKEAALKEAYRVLKNGGRLAIADVVVLK 186

Query: 218 FWLS--RYFADVWM-----LFPKEEEYIEWFQKAGFKDVQL 251
                 R+  ++W+       P  EEY E  Q+ GFK++++
Sbjct: 187 NVPDEIRHSVEMWVGCIAGALPV-EEYKEILQRVGFKNIEI 226


>gi|339451959|ref|ZP_08655329.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           lactis KCTC 3528]
          Length = 236

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQK----EPLKECKIVEGDAED 168
           ++D+  GT    L + +  D   +VT LD S   LA  ++K    +   +  +V+GDA  
Sbjct: 52  IIDLATGTADWALALAEKSDPTAHVTGLDFSEEMLAVGQKKVDVSDYFDKITLVQGDAMA 111

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF  +  D       +   PDP  G++E YRVLK GG+  I+       P+   FW   
Sbjct: 112 LPFADNTFDIVTIGFGLRNLPDPVLGLQEMYRVLKPGGQLVILETSQPDNPLVKPFW-QL 170

Query: 223 YFADVWMLFPK 233
           YF  V  +F K
Sbjct: 171 YFGQVMPMFGK 181


>gi|383781147|ref|YP_005465714.1| putative methyltransferase [Actinoplanes missouriensis 431]
 gi|381374380|dbj|BAL91198.1| putative methyltransferase [Actinoplanes missouriensis 431]
          Length = 201

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           ++DVG GTG      + H  A   VT +D SP  LA A+ +   +   + EGDA  LPFP
Sbjct: 45  ILDVGVGTGRN----LPHYRADATVTGIDLSPEMLAVAR-RSAQRPVDLREGDATRLPFP 99

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---IGPVYPTFWLSRYFADVWM 229
               D  V A S+   PDP+  I EA RVL  GG+  +   IG   P    +++  +   
Sbjct: 100 DGSFDTVVCALSLCAIPDPRAAIGEARRVLVPGGRLLLLDHIGSSRPPVRAAQWLLERVT 159

Query: 230 LFPKEEEY----IEWFQKAGFKDVQLKRI 254
           +    E +    +   + AGF+ V+++R+
Sbjct: 160 IRAAGEHFTRRQLPLVRAAGFEIVEVERL 188


>gi|303248878|ref|ZP_07335127.1| transcriptional regulator, ArsR family [Desulfovibrio
           fructosovorans JJ]
 gi|302489747|gb|EFL49680.1| transcriptional regulator, ArsR family [Desulfovibrio
           fructosovorans JJ]
          Length = 322

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 12/159 (7%)

Query: 97  MRDDALEPAD--------LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA 148
           +R + L P D        +  R  L  D+G G G     + +   A  V  +D SP  L+
Sbjct: 128 LRREVLGPVDPAALVREVMPGRVSLAADLGCGPGEMLPVLAER--AATVIGVDSSPSMLS 185

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
            A+++       +  G+ E LP     AD  V   ++ + PDP   + EA RVL   G+ 
Sbjct: 186 LAERRTAGLPVGMRMGELEHLPMADGEADFAVICLTLHHLPDPAAALAEARRVLAPKGRL 245

Query: 209 CIIGPV-YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246
            +I    +    + R F D W+ F + E++  WF +AGF
Sbjct: 246 AVIDFTPHGDEAMRRRFGDRWLGFSR-EKFAAWFARAGF 283


>gi|427712964|ref|YP_007061588.1| methylase [Synechococcus sp. PCC 6312]
 gi|427377093|gb|AFY61045.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Synechococcus sp. PCC 6312]
          Length = 212

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           V+D+  GTG     ++       +T +D SP  LA A  K +   E      + + LPFP
Sbjct: 49  VLDLACGTGEFAYRLLSQYPELRLTGIDLSPKMLAVAINKCQTFPEAHFQCANIQQLPFP 108

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML-- 230
               DR V++ +  Y+P+P   + E  RVL   GK  I+      +WL + +   W+L  
Sbjct: 109 DACFDRIVTSSAFHYFPEPVNALTEMKRVLDPAGKLIIVDWC-KDYWLCQIYD--WVLPW 165

Query: 231 -------FPKEEEYIEWFQKAGFKDVQLKRIGPKW 258
                       E  E  +KA  K   L+RI P W
Sbjct: 166 VDPAYRGCYTRAELRELIEKAQLKLHYLERIRPDW 200


>gi|420376718|ref|ZP_14876439.1| ubiE/COQ5 methyltransferase family protein [Shigella flexneri
           1235-66]
 gi|391301675|gb|EIQ59558.1| ubiE/COQ5 methyltransferase family protein [Shigella flexneri
           1235-66]
          Length = 256

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV  K V   D S   L   +KA +   L+     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHV--KQVVAYDLSSQMLEVVSKAAKDRGLENIATRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  D  D  +S  S  +W D  R +RE  RVLK GG   ++  + P
Sbjct: 106 FEDDVFDVVISRYSAHHWHDVGRALREVNRVLKPGGVLIVMDVMSP 151


>gi|154498172|ref|ZP_02036550.1| hypothetical protein BACCAP_02153 [Bacteroides capillosus ATCC
           29799]
 gi|150272719|gb|EDM99887.1| methyltransferase domain protein [Pseudoflavonifractor capillosus
           ATCC 29799]
          Length = 189

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 94  TEDMRDDALE--PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151
           T+D    AL   P   S R   +++V  GTG  T+ + + +    +T LD SP  L +AK
Sbjct: 6   TQDYLSTALSGIPEGFSGR---LLEVPVGTGILTMPLYREMPEAEITCLDYSPEMLERAK 62

Query: 152 QK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC- 209
            + E L      +GD   LPF     D  +S      +PD +   RE++RVL+ GG  C 
Sbjct: 63  SRGEGLAHVCFQQGDVGALPFGDGSFDIVLSLNGFHAFPDKEAAWRESFRVLRPGGIFCG 122

Query: 210 ---IIGPVYPTFWLSR 222
              + G    T WL R
Sbjct: 123 CFYVRGQNRRTDWLIR 138


>gi|374629907|ref|ZP_09702292.1| Methyltransferase type 11 [Methanoplanus limicola DSM 2279]
 gi|373908020|gb|EHQ36124.1| Methyltransferase type 11 [Methanoplanus limicola DSM 2279]
          Length = 219

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 9/145 (6%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVE--GDAED 168
           + +D+G G    ++ + +  D  +V   D S      A +   E   E +I    GD  D
Sbjct: 45  ICIDLGSGPASLSIAVAEKTDL-DVIAFDYSEDMQEAASKNIIEAGLEGRITLTCGDVHD 103

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           +PF  DYAD  +S GS+ +W D     +E YR+LK GGK  I G     F     F  V 
Sbjct: 104 MPFGDDYADLIISRGSMFFWDDIHTAFKEIYRILKPGGKTYIGG----GFGNKELFESVS 159

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKR 253
               ++    E F +    D  +KR
Sbjct: 160 AEMIRKNPEWEEFSRKNMSDENIKR 184


>gi|325955396|ref|YP_004239056.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Weeksella virosa DSM 16922]
 gi|323438014|gb|ADX68478.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Weeksella virosa DSM 16922]
          Length = 244

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 5/108 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK----IVEGDAEDL 169
           V+D+  GTG   + + KH +AK +T LD S   L   ++K  +++ +    ++ GD+E+L
Sbjct: 63  VLDIATGTGDLAIMMAKHTNAK-ITGLDLSAGMLEVGRKKVAMEKLQNRIELILGDSENL 121

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           PFP +  D    +  +  + + ++G+ E  RVLK GG   I+   YP+
Sbjct: 122 PFPDNSFDCVTVSFGVRNFENLKKGLAEIRRVLKPGGTFVILEFSYPS 169


>gi|261205312|ref|XP_002627393.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           dermatitidis SLH14081]
 gi|239592452|gb|EEQ75033.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           dermatitidis SLH14081]
          Length = 315

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  LA+ K++              
Sbjct: 116 ILDVAGGTGDIAFRMLDHATNINNDHKTRVTIADINPDMLAEGKKRSLETPYYNTDRLSF 175

Query: 162 VEGDAEDLPF-PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG----------KACI 210
           ++G+AE +P  P +  D Y  A  I  + D Q  + EA+RVLK GG             +
Sbjct: 176 MQGNAESIPMIPDNSIDLYTVAFGIRNFTDKQAALNEAFRVLKPGGVFASLEFSKVTNGM 235

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 236 FDQVYKQWSFSAIPLIGHLVAGDRSSYQYLVESIEKFPSQEEFRGMIQKAGF 287


>gi|239611392|gb|EEQ88379.1| ubiquinone biosynthesis methyltransferase coq5 [Ajellomyces
           dermatitidis ER-3]
          Length = 315

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE------PLKECKI 161
           ++DV GGTG     ++ H    N      VTI D +P  LA+ K++              
Sbjct: 116 ILDVAGGTGDIAFRMLDHATNINNDHKTRVTIADINPDMLAEGKKRSLETPYYNTDRLSF 175

Query: 162 VEGDAEDLPF-PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG----------KACI 210
           ++G+AE +P  P +  D Y  A  I  + D Q  + EA+RVLK GG             +
Sbjct: 176 MQGNAESIPMIPDNSIDLYTVAFGIRNFTDKQAALNEAFRVLKPGGVFASLEFSKVTNGM 235

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
              VY  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 236 FDQVYKQWSFSAIPLIGHLVAGDRSSYQYLVESIEKFPSQEEFRGMIQKAGF 287


>gi|436838568|ref|YP_007323784.1| Methyltransferase type 11 [Fibrella aestuarina BUZ 2]
 gi|384069981|emb|CCH03191.1| Methyltransferase type 11 [Fibrella aestuarina BUZ 2]
          Length = 295

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 113 LVVDVGGGTGFTT-LGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAED 168
           +VVD+G G G    +   +  +   V  LD +P  + +A+Q   K      + V GD ED
Sbjct: 80  VVVDLGSGAGNDCFVARAETGETGRVIGLDMTPAMIDRARQNTKKLGYTNVEFVYGDIED 139

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI-----IGPVYPTF-WLSR 222
           +P P + AD  VS   +   P+  +   E +R+LK GG   I      G + P     + 
Sbjct: 140 MPLPHNLADVVVSNCVMNLVPNKAQAFAETFRILKPGGHFSISDIVLAGTLPPAIRQAAE 199

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256
            +A       +E+ Y++   +AGF +VQ+++  P
Sbjct: 200 LYAGCVSGAIQEQAYLDTVTQAGFTNVQIQKRKP 233


>gi|354566756|ref|ZP_08985927.1| Methyltransferase type 11 [Fischerella sp. JSC-11]
 gi|353544415|gb|EHC13869.1| Methyltransferase type 11 [Fischerella sp. JSC-11]
          Length = 207

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 13/116 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+  G+G TT  +VK   ++NVT LD SP  L +AKQ  P  + + VE  AE++PF  
Sbjct: 49  VLDLCCGSGQTTQFLVKM--SQNVTGLDASPLSLLRAKQNVP--QAEYVEAFAEEMPFAD 104

Query: 174 DYADR-YVSAGSIEYWPDPQRG-IREAYRVLKLGGKACII------GPVY-PTFWL 220
              D  + S    E  P+  R  IRE YRVLK GG   ++       P++ P+ WL
Sbjct: 105 HEFDLVHTSVALHEMQPEQLREIIREVYRVLKPGGVFTVVDFHNPHNPLFLPSVWL 160


>gi|222151369|ref|YP_002560525.1| 2-hexaprenyl-1,4-naphthoquinone methyltransferase [Macrococcus
           caseolyticus JCSC5402]
 gi|222120494|dbj|BAH17829.1| 2-hexaprenyl-1,4-naphthoquinone methyltransferase [Macrococcus
           caseolyticus JCSC5402]
          Length = 240

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 17/147 (11%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + + V +  +VT LD S + L+ A +K + +    ++ G+A DLPF 
Sbjct: 57  LDVCCGTGDWTIQMSQAVGSHGHVTGLDFSDNMLSVAHKKTDHIANVNLIHGNAMDLPFE 116

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF------------WL 220
            +  D       +   PD ++G+ E YRVLK GG   ++   +PT             ++
Sbjct: 117 DNTFDYTTIGFGLRNLPDYKKGLEEMYRVLKPGGMIVVLETSHPTMPVFKQGYKLYFKYI 176

Query: 221 SRYFADVWMLFPKEEEYIEWFQKAGFK 247
             +F  V   F K  +   W Q++ F+
Sbjct: 177 MPFFGKV---FAKSMKEYSWLQQSAFE 200


>gi|159896643|ref|YP_001542890.1| type 11 methyltransferase [Herpetosiphon aurantiacus DSM 785]
 gi|159889682|gb|ABX02762.1| Methyltransferase type 11 [Herpetosiphon aurantiacus DSM 785]
          Length = 274

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 15/155 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKN-VTILDQSPHQLAKAKQ---KEPLKECKIVEGDAED 168
           +V+D+G G G   L   K V     V  +D +   L  A+Q   K  ++    ++GD E 
Sbjct: 76  VVLDLGSGGGLDVLLAAKQVGPSGFVYGVDMTDAMLDLARQNAHKAQIENVAFLKGDIEQ 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-------YPTFWLS 221
           LP   +  D  +S   I   PD    +REAYRVLK+GG   I   V       +P    S
Sbjct: 136 LPLENEQVDVIISNCVINLAPDKGMALREAYRVLKVGGYMAISDIVIDGSLADFPLPEAS 195

Query: 222 RYFADVWMLF----PKEEEYIEWFQKAGFKDVQLK 252
              A  W       P  E+Y ++  +AGF+ +  +
Sbjct: 196 LRAAMNWAGCVAGAPTREQYQQFLAQAGFQAISFE 230


>gi|253689655|ref|YP_003018845.1| type 11 methyltransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756233|gb|ACT14309.1| Methyltransferase type 11 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 257

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+DVG G G  +    + V    V   D S   L   ++A  ++ L   ++ +G AE LP
Sbjct: 50  VIDVGCGAGHASFVAAQAV--AEVIAYDLSSQMLEVVSQAAMQKGLNNIRVQQGVAESLP 107

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + +RE  RVLK GG+  ++  V P    L  Y   V  
Sbjct: 108 FKDSSADIIISRYSAHHWHDVGQALREMRRVLKPGGRVIMMDVVSPGHPLLDSYLQTVEK 167

Query: 230 LFPKEE-------EYIEWFQKAGF 246
           L            E++  F +AGF
Sbjct: 168 LRDTSHVRNYAPGEWLSLFTEAGF 191


>gi|403252493|ref|ZP_10918803.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           sp. EMP]
 gi|402812506|gb|EJX26985.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           sp. EMP]
          Length = 219

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 31/162 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+  GTG     + +      +T LD S   L  AK++  LK+ + + GDA DLPF  
Sbjct: 42  VLDLAAGTGDVARLLKRKAPHLEITGLDSSSKMLETAKKR--LKDGEFITGDAHDLPFDD 99

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII-----------GPVYPTFWLS- 221
           +  D    A     + D ++ +RE  RVLK GG+  I+           G +Y +F+L  
Sbjct: 100 ESFDAITVAFGFRNFSDRRKVLRECRRVLKKGGRLVILELLPPNTKRFTGKIY-SFYLKT 158

Query: 222 ----------------RYFADVWMLFPKEEEYIEWFQKAGFK 247
                           RY +   + F + ++ +E  ++ GFK
Sbjct: 159 WVPFVGGLLSGDFHAYRYLSTSVLNFLRPDQIVEMMKEEGFK 200


>gi|326474914|gb|EGD98923.1| ubiquinone biosynthesis methyltransferase coq5 [Trichophyton
           tonsurans CBS 112818]
          Length = 318

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 39/198 (19%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGI------VKHVDAKNVTILD 141
           +NPGH            +++ ++   ++DV GGTG     +      +KH     VT+ D
Sbjct: 96  LNPGHQYAREGPSKSGSSEIEHQGWNILDVAGGTGDIAFRMLDHATNIKHDQYTRVTVAD 155

Query: 142 QSPHQLAKAKQKE------PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRG 194
            +P  L + K++              ++G+AE +P  P++  D Y  A  I  + + Q  
Sbjct: 156 INPDMLTEGKKRSLDTPYYNSDRLSFMQGNAESMPSIPSNSVDLYTVAFGIRNFTNKQAA 215

Query: 195 IREAYRVLKLGGK-ACI---------IGPVYPTFWLS----------------RYFADVW 228
           + EAYRVLK GG  AC+            VY  +                   +Y  +  
Sbjct: 216 LEEAYRVLKPGGVFACLEFSKVTVGAFDEVYKRWSFGAIPLIGQLVAGDRASYQYLVESI 275

Query: 229 MLFPKEEEYIEWFQKAGF 246
             FP +EE+    +KAGF
Sbjct: 276 ERFPSQEEFRGTIRKAGF 293


>gi|423456316|ref|ZP_17433168.1| hypothetical protein IEE_05059 [Bacillus cereus BAG5X1-1]
 gi|401130620|gb|EJQ38287.1| hypothetical protein IEE_05059 [Bacillus cereus BAG5X1-1]
          Length = 277

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAED 168
           M++ ++G G GF T  I+       VT ++  P  +  A+   +K+    C++++G   D
Sbjct: 53  MVIAELGSGPGFVTEKILDQFPNTKVTAIEIEPLLVDYARNYLEKKYSNRCEVIQGSIMD 112

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
              P +  D  ++   +E+ P+P   +RE +R+LK GGKA  +
Sbjct: 113 TGLPDNSFDFAITRLVLEHLPNPVNAVREVFRILKPGGKAIFV 155


>gi|85706183|ref|ZP_01037278.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseovarius sp. 217]
 gi|85669347|gb|EAQ24213.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseovarius sp. 217]
          Length = 247

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKEC-KIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   E + E    V GDA  L
Sbjct: 64  LLDVAGGTGDISFRFLKRAGQAHATVLDLTEPMLIEGRKRAEAEQMAESLDWVVGDAMAL 123

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----------GPVYPTFW 219
           PF  +  D Y  +  I     PQ  + EA+RVLK GG+  ++            VY  + 
Sbjct: 124 PFENNSFDVYTISFGIRNVTRPQEALNEAFRVLKPGGRLMVLEFSQIPNELMQKVYDLYS 183

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +E +++  + AGF++ + + +
Sbjct: 184 FNIIPRLGQMIADDRDSYQYLVESIRQFPDQETFLQMVRAAGFENAKYRNL 234


>gi|116619092|ref|YP_819463.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097939|gb|ABJ63090.1| demethylmenaquinone methyltransferase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 236

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 39/196 (19%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK 151
           W + + D  + P     R   ++D+  GT    + + ++ D+ +  I LD S   L   +
Sbjct: 36  WRQKVMDKMVFP-----RKAQIIDLATGTADWAIALAENSDSDSEIIGLDFSESMLVVGQ 90

Query: 152 QKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
            K  +    ++  + +GD  DL FP +  D       +   PDP++GI+E YR+LK GG+
Sbjct: 91  TKVDISDYSEKITLEQGDVMDLEFPDNSFDIVTIGFGLRNLPDPKQGIKEMYRILKPGGQ 150

Query: 208 ACII------GPVYPTFWLSRYFADVWMLFPK----------------EEEYIEWFQ--- 242
             I+       P+   FW   YF  V  LF +                 E ++++     
Sbjct: 151 LVILETSQPDSPLVKPFW-QLYFGHVMPLFGRVFAKGKYQEYKYLDETTEHFMDYMTLGQ 209

Query: 243 ---KAGFKDVQLKRIG 255
              K+GFK V++ R  
Sbjct: 210 LLLKSGFKKVRISRFN 225


>gi|448600912|ref|ZP_21656291.1| methyl transferase-like protein [Haloferax alexandrinus JCM 10717]
 gi|445734925|gb|ELZ86481.1| methyl transferase-like protein [Haloferax alexandrinus JCM 10717]
          Length = 193

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPA-DLSNRNM-LVVDVGGGTGFTTLGIVKHV 132
           +F RF + VYD V+ P          ALE A D ++R++  VVD+GGG+G  TL +    
Sbjct: 9   FFDRF-APVYDLVMPPADPG------ALETALDRADRDVERVVDIGGGSGRATLAL---- 57

Query: 133 DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
           D     +LD+S   L +A+ +    +C  V GDA  LPF  D  D      +  + P+ Q
Sbjct: 58  DVPERIVLDRSVGMLRRARGRG--LDC--VRGDARGLPFADDALDAVTVVDAFHHMPN-Q 112

Query: 193 RGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKAG 245
           RG+  E +RVL  GG    +    P   L R       +      F   +E + + ++ G
Sbjct: 113 RGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFAAPDELVRFLERVG 171

Query: 246 FKDVQLKR 253
           F+   ++R
Sbjct: 172 FEAAVVER 179


>gi|365848115|ref|ZP_09388594.1| methyltransferase domain protein [Yokenella regensburgei ATCC
           43003]
 gi|364571316|gb|EHM48907.1| methyltransferase domain protein [Yokenella regensburgei ATCC
           43003]
          Length = 256

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 15/122 (12%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAE 167
           V+D+G G G   FT  G V      NVT  D SP  L   A A Q+  L+     +G AE
Sbjct: 48  VLDMGCGAGHASFTAAGAVA-----NVTAYDLSPQMLDVVADAAQERGLRNITTRQGYAE 102

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227
            LPF     D  +S  S  +W D  R +RE  RVLK GG   ++  + P   L     D+
Sbjct: 103 VLPFADASFDIVISRYSAHHWHDVGRALREVQRVLKPGGVLIMMDVMSPGHPLR----DI 158

Query: 228 WM 229
           W+
Sbjct: 159 WL 160


>gi|312144647|ref|YP_003996093.1| type 11 methyltransferase [Halanaerobium hydrogeniformans]
 gi|311905298|gb|ADQ15739.1| Methyltransferase type 11 [Halanaerobium hydrogeniformans]
          Length = 206

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 5/108 (4%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVE 163
           A+  N    ++D+GGGTG     + K++ DA  +TI D S   L KA+ K+  +   +V 
Sbjct: 42  AEAENELKKLLDLGGGTG----ELAKYLPDAVEITIADPSEAMLKKAENKDFAQNVDVVL 97

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
            D E+LPF  +  D    + ++ ++ + +  + EA RVLK GGK  I+
Sbjct: 98  ADGENLPFADNSFDYLTISDALHHFREVEVVLSEASRVLKTGGKIYIL 145


>gi|258515753|ref|YP_003191975.1| type 11 methyltransferase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779458|gb|ACV63352.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
          Length = 263

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 18/183 (9%)

Query: 113 LVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAED 168
           +V+D+G G GF      + V  + NV  +D +P  ++KA+          VE   G+ E 
Sbjct: 81  VVLDLGSGAGFDVFLAARKVGPSGNVIGVDMTPEMISKARHNAASMGFSNVEFRLGEIEH 140

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-------S 221
           LP      D  +S   I   PD Q    EA+RVLK GGK  +I  V     L       +
Sbjct: 141 LPVADSSVDVIISNCVINLSPDKQAVFNEAFRVLKPGGKI-VISDVVRVDELPEEIRNNN 199

Query: 222 RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR------IGPKWYRGVRRHGLIMGCSVTG 275
             +         + E +    KAGFK++ +K       I   W  G     +++   +  
Sbjct: 200 EAYCGCISGAILQNELVSILNKAGFKNILVKNKANSEEIINSWNFGQNIEKVVVSADIRA 259

Query: 276 VKP 278
           +KP
Sbjct: 260 IKP 262


>gi|194333273|ref|YP_002015133.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Prosthecochloris aestuarii DSM 271]
 gi|194311091|gb|ACF45486.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Prosthecochloris aestuarii DSM 271]
          Length = 249

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 5/104 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  GTG     + K   A+ VT +D SP  LA A++K P  + + V+G AE L F T
Sbjct: 74  ILDVATGTGDLAKEMSKLQGAR-VTGMDLSPEMLAIAEKKYP--QIRFVQGYAEKLNFDT 130

Query: 174 DYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
              D  VSAG     + D  +G++E +RVLK GG A II P+ P
Sbjct: 131 ASFD-IVSAGFGARNFEDLTKGLKEFHRVLKPGGHALIIEPMIP 173


>gi|339480770|ref|ZP_08656429.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           pseudomesenteroides KCTC 3652]
          Length = 236

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    + + +  D    +T LD S   L   + K  L +      +V+GDA  
Sbjct: 52  IIDLATGTADWAIALAEKSDPTAKITGLDFSREMLTVGQHKVDLSDYADKITLVQGDAMS 111

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF  ++ D       +   PDP +G+RE YRVLK GG+  ++       P+   FW   
Sbjct: 112 LPFEDNHFDIVTIGFGLRNLPDPIQGLREMYRVLKPGGQLVVLETSQPDNPIVKPFW-RL 170

Query: 223 YFADVWMLFPK 233
           YF  V  L  K
Sbjct: 171 YFGQVMPLLGK 181


>gi|387602744|ref|YP_005734265.1| menaquinone biosynthesis methyltransferase UbiE [Staphylococcus
           aureus subsp. aureus ST398]
 gi|404478818|ref|YP_006710248.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus 08BA02176]
 gi|283470682|emb|CAQ49893.1| menaquinone biosynthesis methyltransferase UbiE [Staphylococcus
           aureus subsp. aureus ST398]
 gi|404440307|gb|AFR73500.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus 08BA02176]
          Length = 241

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V+    VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVEPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|115380548|ref|ZP_01467510.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Stigmatella aurantiaca DW4/3-1]
 gi|115362449|gb|EAU61722.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Stigmatella aurantiaca DW4/3-1]
          Length = 260

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLK-ECKIVEGDAEDL 169
           V+D+  GTG   L ++KH     V  LD S   +   ++K   E L  +C++  GDA+ L
Sbjct: 76  VLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAKCELKLGDAQSL 135

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII-------GPVYPTF---- 218
           PF     D    A  I   PD  R +RE  RV + GG+  I+       G + P      
Sbjct: 136 PFEDQSFDGICMAFGIRNVPDRPRALREMARVTRPGGRIAILELSEPRNGLLSPLLRFQI 195

Query: 219 -----WLS---------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                WL          RY  +    FP+ E + +  +++G + +Q+ R+
Sbjct: 196 RKVVPWLGAQLSGSGEYRYLQESIAAFPQPEAFADIMRESGLEVLQVHRL 245


>gi|373108670|ref|ZP_09522952.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 10230]
 gi|423129659|ref|ZP_17117334.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 12901]
 gi|423133324|ref|ZP_17120971.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CIP 101113]
 gi|423328922|ref|ZP_17306729.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 3837]
 gi|371646787|gb|EHO12298.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 10230]
 gi|371648244|gb|EHO13735.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 12901]
 gi|371648824|gb|EHO14309.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CIP 101113]
 gi|404604056|gb|EKB03698.1| ubiquinone/menaquinone biosynthesis methyltransferase [Myroides
           odoratimimus CCUG 3837]
          Length = 242

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL 169
           ++D+  GTG   + ++   +A  +T LD S   L   KQK          ++V+GD+E+L
Sbjct: 61  ILDIATGTGDLAI-LLSKTEATKITGLDLSAGMLEVGKQKIKALNLDNRIEMVQGDSENL 119

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT--------FWLS 221
           PF  +  D       I  + D ++G+ E  RVLK GG   I+    PT        F+ +
Sbjct: 120 PFADNTFDAITVGFGIRNFEDLEKGLSEILRVLKPGGIFVILETSVPTKFPFKQGYFFYT 179

Query: 222 ------------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
                             +Y +D    FP  E      +K GFKDV+
Sbjct: 180 QNVMPFMGKLFSKDQKAYKYLSDSAKNFPFGEALNNILRKVGFKDVK 226


>gi|119718437|ref|YP_925402.1| type 11 methyltransferase [Nocardioides sp. JS614]
 gi|119539098|gb|ABL83715.1| Methyltransferase type 11 [Nocardioides sp. JS614]
          Length = 261

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 10/121 (8%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVE 163
           A L  R  +V ++G GTGF   G+ + VD     I +D     L +A+++ P   C+ V 
Sbjct: 33  ASLLARGRVVAEIGCGTGF---GLARVVDGAERAIGIDLDEANLREARRRAP--ACQFVC 87

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY 223
           GDA  LP      +  V+   I Y  D     REA RVL+LGGK  +  P  PT    RY
Sbjct: 88  GDATALPLQDQSIEVLVALEMIYYIEDQPLFFREAARVLRLGGKLLLTMP-NPT---RRY 143

Query: 224 F 224
           F
Sbjct: 144 F 144


>gi|389793099|ref|ZP_10196274.1| Methyltransferase [Rhodanobacter fulvus Jip2]
 gi|388435014|gb|EIL91935.1| Methyltransferase [Rhodanobacter fulvus Jip2]
          Length = 256

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP 170
           ++D+G G G  +  +  HV    V   D S   LA    A  +  L   +  +G AE LP
Sbjct: 46  ILDMGCGAGHASFAMAPHV--GEVVAYDLSRDMLAVVRDAAAQRGLPSVRTEQGPAEQLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  VS  S  +W DP   + EA RVLK GG  C I  V P
Sbjct: 104 FEAGAFDLVVSRYSAHHWSDPATALGEAARVLKPGGHLCFIDVVGP 149


>gi|228470992|ref|ZP_04055837.1| methlytransferase, UbiE/COQ5 family [Porphyromonas uenonis 60-3]
 gi|228307389|gb|EEK16403.1| methlytransferase, UbiE/COQ5 family [Porphyromonas uenonis 60-3]
          Length = 221

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 86  HVINPGHWTEDMRDDALE-----PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           H+   G W  +    A E     P D + R   ++DV  GT   T    K +    +T L
Sbjct: 28  HLFMNGLWQVNQLQMAAEVLAMIPDDFAGR---LLDVPVGTAVFTCDKYKQLAKAQITAL 84

Query: 141 DQSPHQLAKAKQK---EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
           D S   L  A  +   E +    +V+GD   +PF     D  ++   ++ +PD ++ +RE
Sbjct: 85  DYSEKMLKMAAHRFEVEGVTNVSLVQGDVGAMPFADGEFDYLLTMSGLQAFPDKEQALRE 144

Query: 198 AYRVLKLGGKAC 209
            +RVLK GG+ C
Sbjct: 145 MHRVLKPGGRLC 156


>gi|307942718|ref|ZP_07658063.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseibium sp. TrichSKD4]
 gi|307773514|gb|EFO32730.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseibium sp. TrichSKD4]
          Length = 266

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 37/172 (21%)

Query: 115 VDVGGGTGFTTLGIVKH--------VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA 166
           +DV GGTG     +V+         V   N ++L     + AKA   + ++     +G+A
Sbjct: 83  LDVAGGTGDIATRVVEKSGLSVSSVVCDINESMLGVGKDRAAKAGLSDHIE---FAQGNA 139

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYP 216
           EDLPFP    D Y  A  I   PD  + + EA RVLK GG+  C+         +  VY 
Sbjct: 140 EDLPFPDKSFDAYTIAFGIRNVPDIPKALAEARRVLKRGGRFMCLEFSEVDVPGLDKVYD 199

Query: 217 TFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
           +F  +                RY  +    FP +E++ +  ++AGF+ V  +
Sbjct: 200 SFSFNAIPAMGKMVTGDGEPYRYLVESIRKFPHQEQFAQMIREAGFERVSYR 251


>gi|260949395|ref|XP_002618994.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238846566|gb|EEQ36030.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 359

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 42/188 (22%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD------AKNVTILDQSPHQLA---- 148
           D  + P   S+R +  +DV GGTG    G++ H +         +TI D +P  LA    
Sbjct: 151 DAGMRPG--SSRPLDFLDVAGGTGDIAFGLLDHAEKHYHDTQSTMTIADINPDMLAEGKL 208

Query: 149 ---KAKQKEPLKECKIVEGDAEDL-PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKL 204
              K K  +     + +E + E +   P +  D Y  A  I  + + Q G+  AYRVL+ 
Sbjct: 209 RYAKTKWNDGKNRVQFLEQNGETMDAIPDNSKDVYTIAFGIRNFTNIQAGLNTAYRVLRP 268

Query: 205 GGK-AC---------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYI 238
           GG  AC         ++  +Y  +  S                +Y  +    FPK+EE+ 
Sbjct: 269 GGIFACLEFSHVDNPVVDYIYQAYSFSMLPLMGQLIADDRDSYQYLVESIQRFPKQEEFS 328

Query: 239 EWFQKAGF 246
              +KAGF
Sbjct: 329 AMIEKAGF 336


>gi|149204239|ref|ZP_01881206.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
           protein [Roseovarius sp. TM1035]
 gi|149142124|gb|EDM30171.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
           protein [Roseovarius sp. TM1035]
          Length = 229

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 8/112 (7%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG 164
           AD+  R+  V+D+G G G   L          VT +D +P  +A A+   P  E + V+G
Sbjct: 16  ADIGARD--VLDIGCGHG--ALARTLRRAGYTVTGIDPAPEAVAAARMAVP--EGRFVQG 69

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPV 214
            AE LPF T   D  +   S+ + P P  Q  +REA RVL+ GG+  I+ PV
Sbjct: 70  GAEALPFATASFDACIFLNSLHHVPVPLMQAALREALRVLRPGGELMIVEPV 121


>gi|415884991|ref|ZP_11546919.1| hypothetical protein MGA3_07135 [Bacillus methanolicus MGA3]
 gi|387590660|gb|EIJ82979.1| hypothetical protein MGA3_07135 [Bacillus methanolicus MGA3]
          Length = 249

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDA 166
           +R+  ++D G GTG T+  + K     NV  +D  P  + KA Q+  E     KI +G+ 
Sbjct: 35  HRHTKILDAGCGTGQTSSYLAKTFSC-NVYSIDNHPEMIKKATQRITEENLPVKIFKGNI 93

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226
           E LPF  D  D Y+ A S   + +  + ++E +RVLK  G    I             A+
Sbjct: 94  EKLPFSNDSFD-YILAESSTAFTNISKTLKEYFRVLKPSGLLLNIDMTAEQRLNRNEKAE 152

Query: 227 VWMLFP-----KEEEYIEWFQKAGFKDVQL 251
           +   +       EEE+I+  ++AGFK V++
Sbjct: 153 IMKFYEMKDILTEEEWIKAMKRAGFKKVEV 182


>gi|260428785|ref|ZP_05782762.1| ubiquinone biosynthesis methyltransferase COQ5, precursor
           [Citreicella sp. SE45]
 gi|260419408|gb|EEX12661.1| ubiquinone biosynthesis methyltransferase COQ5, precursor
           [Citreicella sp. SE45]
          Length = 250

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK----EPLKECKIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++        E   V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLKRAGHGHATVLDLTEPMLVEGRKRAEAASKADELDWVVGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PFP +  D Y  +  I     PQ  + EAYRVL+ GG+  ++
Sbjct: 127 PFPDNSFDVYTISFGIRNVTRPQEALNEAYRVLRPGGRLMVL 168


>gi|187923068|ref|YP_001894710.1| type 11 methyltransferase [Burkholderia phytofirmans PsJN]
 gi|187714262|gb|ACD15486.1| Methyltransferase type 11 [Burkholderia phytofirmans PsJN]
          Length = 250

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 79  FLSIVYDHVINPGHWT-EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           F S    ++ +P H T  D+R  AL  +  +  +  V+D+G G G  +  +  H  A+ V
Sbjct: 11  FGSTAAAYLTSPTHATGADLR--ALAESIAATPDATVLDMGCGAGHASFAVAPH--AREV 66

Query: 138 TILDQSPHQLAK---AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRG 194
              D +P  LA    A ++  L   +  +G AE LPF     D  +S  S  +W D    
Sbjct: 67  VAYDIAPQMLATVEGAAKERGLANIRTQQGAAEVLPFADHSFDWVISRMSAHHWHDMPLA 126

Query: 195 IREAYRVLKLGGKACII---GPVYPTFWLSRYFADVWMLFP-------KEEEYIEWFQKA 244
           + E  RVLK GGK   I   G  +P   L  +   + +L         + +E++  F  A
Sbjct: 127 LAEVRRVLKPGGKVLFIDIAGIDHPL--LDTHIQAIELLRDGSHIRDYRADEWLALFATA 184

Query: 245 GFK 247
           GFK
Sbjct: 185 GFK 187


>gi|358391128|gb|EHK40532.1| hypothetical protein TRIATDRAFT_146168 [Trichoderma atroviride IMI
           206040]
          Length = 307

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 77/199 (38%), Gaps = 44/199 (22%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPH 145
           H+   +   A  P  +  R   ++DV GGTG     +++H    N      VTI D +P 
Sbjct: 91  HFVSSLNPGATNPTGMPQR---ILDVAGGTGDIAFRMLQHAHVNNGNPNVHVTISDINPA 147

Query: 146 QLAKAKQKE------PLKECKIVEGDAEDLP--FPTDYADRYVSAGSIEYWPDPQRGIRE 197
            L+  KQ+              +E +AE LP     +  D Y  A  I  + +    +RE
Sbjct: 148 MLSVGKQRSLSLPASHQSSLSFLEANAEVLPSSLKDNSLDLYTVAFGIRNFSNMPAALRE 207

Query: 198 AYRVLKLGGK-AC----------IIGPVYPTFWLS----------------RYFADVWML 230
           AYRVLK GG  AC          I   +Y  +  S                +Y  +    
Sbjct: 208 AYRVLKPGGIFACMEFSKVDKYPIFNAIYKQWSFSAIPLIGQLVAGDRDSYQYLVESIER 267

Query: 231 FPKEEEYIEWFQKAGFKDV 249
           FP +EE+ +    AGF  V
Sbjct: 268 FPSQEEFRDMIAGAGFAIV 286


>gi|86605750|ref|YP_474513.1| UbiE/COQ5 family methlytransferase [Synechococcus sp. JA-3-3Ab]
 gi|86554292|gb|ABC99250.1| methyltransferase, UbiE/COQ5 family [Synechococcus sp. JA-3-3Ab]
          Length = 210

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 134 AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP-- 191
           ++NV  LD SP  LA A+Q+ P    + VE  A+DLPFPTD  D   ++ ++   P P  
Sbjct: 67  SQNVVGLDASPKALAAARQRLP--HVEFVEAFAQDLPFPTDSFDWVHTSLALHELPLPDL 124

Query: 192 QRGIREAYRVLKLGGKACII---GPVYPTFW 219
           ++ +RE +RVLK GG   I+    P  P  W
Sbjct: 125 EQVLREGWRVLKPGGGLLILDLHAPRQPLLW 155


>gi|257425535|ref|ZP_05601960.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428194|ref|ZP_05604592.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430824|ref|ZP_05607206.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433582|ref|ZP_05609940.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus E1410]
 gi|257436424|ref|ZP_05612471.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus M876]
 gi|282911048|ref|ZP_06318850.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282914260|ref|ZP_06322047.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus M899]
 gi|282919183|ref|ZP_06326918.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus C427]
 gi|282924367|ref|ZP_06332041.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus C101]
 gi|293501286|ref|ZP_06667137.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293510247|ref|ZP_06668955.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus M809]
 gi|293526842|ref|ZP_06671526.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus M1015]
 gi|384867621|ref|YP_005747817.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|417889197|ref|ZP_12533295.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21195]
 gi|257271992|gb|EEV04130.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275035|gb|EEV06522.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278952|gb|EEV09571.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281675|gb|EEV11812.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus E1410]
 gi|257284706|gb|EEV14826.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus M876]
 gi|282313754|gb|EFB44147.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus C101]
 gi|282316993|gb|EFB47367.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus C427]
 gi|282322328|gb|EFB52652.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus M899]
 gi|282324743|gb|EFB55053.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|290920400|gb|EFD97464.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291096291|gb|EFE26552.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467191|gb|EFF09709.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus M809]
 gi|312438126|gb|ADQ77197.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|341852654|gb|EGS93541.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21195]
          Length = 241

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V +   VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|296271360|ref|YP_003653992.1| type 11 methyltransferase [Thermobispora bispora DSM 43833]
 gi|296094147|gb|ADG90099.1| Methyltransferase type 11 [Thermobispora bispora DSM 43833]
          Length = 263

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 92  HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151
           H+ E +     E + +  +  LV+DVG GTG  T G++       V  LD+    LA  +
Sbjct: 25  HYPETLYQALEELSGVRLKGALVLDVGAGTGIATRGLLDR--GARVVALDRGERMLAVLR 82

Query: 152 QKEPLK-ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            +  L  +C+ V GD   LPF    AD  V A +  +W D +  I EA RVL+ GG
Sbjct: 83  GRTALDLQCRAVLGDGNALPFRDGVADLVVYAQAW-HWLDRRASIAEAVRVLRPGG 137


>gi|413963333|ref|ZP_11402560.1| Methyltransferase [Burkholderia sp. SJ98]
 gi|413929165|gb|EKS68453.1| Methyltransferase [Burkholderia sp. SJ98]
          Length = 254

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           N  V+D+G G G  +  I  HV  + V   D +P  LA    A ++  L   +  +G AE
Sbjct: 43  NARVLDMGCGAGHASFAIAPHV--REVVAYDIAPQMLATVEAAAKERGLTTIRTQQGAAE 100

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK------ACIIGPVYPTFWLS 221
            LPF     D  VS  S  +W D    + E +RVLK GG+      A I  P+Y T   +
Sbjct: 101 TLPFADASFDWAVSRMSAHHWRDVSSALAEVHRVLKPGGRLKFIDIAGIDDPLYDTHIQA 160

Query: 222 -RYFADVWMLFP-KEEEYIEWFQKAGFKDVQLKRIGPKW 258
                D   +   + +E+I     AGF D Q   I  +W
Sbjct: 161 IEILRDASHIRDYRADEWIAMLDAAGF-DAQ---IAERW 195


>gi|402490623|ref|ZP_10837412.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CCGE 510]
 gi|401810649|gb|EJT03022.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. CCGE 510]
          Length = 258

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF T   D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFETGSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGEAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|254780624|ref|YP_003065037.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040301|gb|ACT57097.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 265

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 31/169 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN-VTILDQSPHQLAKAKQ---KEPLKEC-KIVEGDAED 168
           V+DV GGTG     I +  D ++ + + D +   L+  +    KE L++C   +E +AE 
Sbjct: 74  VLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAET 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFW--- 219
           LPF  +  D    A  I   P     ++E YR+LK GG+  ++      GPV+   +   
Sbjct: 134 LPFEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLEFSEVQGPVFKKIYDMW 193

Query: 220 -------LSRYFA----------DVWMLFPKEEEYIEWFQKAGFKDVQL 251
                  L R+ A          +    FP ++++      AGF +V  
Sbjct: 194 SFKVIPQLGRFIAGDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSF 242


>gi|430757129|ref|YP_007210839.1| hypothetical protein A7A1_1637 [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|430021649|gb|AGA22255.1| Hypothetical protein YdaC [Bacillus subtilis subsp. subtilis str.
           BSP1]
          Length = 181

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   K  ++++G  E  P P 
Sbjct: 30  ILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAARRVKPKGVRLIQGSIETFPLPA 89

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +G+++ YR LK GGKA I         +    AD      K
Sbjct: 90  SFYDKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAIT--------MQPREADASPEKTK 141

Query: 234 E--EEYIEWFQKAGFK--DVQLKRIGPK 257
               + I  F+ AGF+  D++ K I P+
Sbjct: 142 SFGRQMIADFKAAGFEDIDIEFKNIKPE 169


>gi|341900755|gb|EGT56690.1| hypothetical protein CAEBREN_25779 [Caenorhabditis brenneri]
          Length = 252

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 31/175 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL----AKAKQKEPLKECKI--VEG 164
           N  ++D+ GGTG     +++H     VT+ D +   L     +A+++  ++  ++  V  
Sbjct: 63  NAKILDMAGGTGDIAFRLLRHSPTAKVTVSDINQPMLDVGKERAEKERDIQTSRLEWVCA 122

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPVY 215
           +AE +PF ++  D +  +  I     P++ +REA+RVLK GG+  I         + P+Y
Sbjct: 123 NAEQMPFESNTYDLFTMSFGIRNCTHPEKVVREAFRVLKPGGQLAILEFSEVNSALKPIY 182

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             +  +                +Y  +    FP ++E+    ++ GF  V+ + +
Sbjct: 183 DAYSFNVIPVLGEILASDRESYQYLVESIRKFPNQDEFARIIREEGFGHVRYENM 237


>gi|289550750|ref|YP_003471654.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus lugdunensis HKU09-01]
 gi|385784378|ref|YP_005760551.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus lugdunensis N920143]
 gi|418414052|ref|ZP_12987268.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           lugdunensis ACS-027-V-Sch2]
 gi|289180282|gb|ADC87527.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus lugdunensis HKU09-01]
 gi|339894634|emb|CCB53918.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus lugdunensis N920143]
 gi|410877690|gb|EKS25582.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           lugdunensis ACS-027-V-Sch2]
          Length = 241

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAE 167
           +N + +DV  GT   T+ + K V     VT LD S + L   K+K   +    +V GDA 
Sbjct: 49  KNSVALDVCCGTADWTIALSKAVGPNGEVTGLDFSENMLKVGKEKTSAMDNVHLVHGDAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---- 222
            LPF  D  D YV+ G  +   PD    ++E +RVLK GG    +    PT  + +    
Sbjct: 109 HLPFEDDSFD-YVTIGFGLRNVPDYLGALKEMHRVLKPGGMVVCLETSQPTMPVFKQVYK 167

Query: 223 -YFADVW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
            YF  V      LF K +E  EW Q++ F      +LKR+
Sbjct: 168 LYFRFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKEKLKRL 207


>gi|333979484|ref|YP_004517429.1| type 11 methyltransferase [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333822965|gb|AEG15628.1| Methyltransferase type 11 [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 229

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 4/102 (3%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAED 168
            M V+D+G GTG  +L + +      VT LD SP  LAKA+ K   +    + V GDA  
Sbjct: 41  GMSVLDIGCGTGNYSLELARR--GLRVTGLDISPGMLAKARAKAEAEGLPVEFVLGDAGQ 98

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           LPF  +  D  +S  ++E+ PDP   +REAYRVLK  G+  +
Sbjct: 99  LPFRDNSFDGVISVSALEFLPDPGAALREAYRVLKPCGRLVV 140


>gi|187934355|ref|YP_001887507.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722508|gb|ACD23729.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 208

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 11/173 (6%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           +VI   ++ E ++   L  A + N+  +  D+G GTGF +L + +   A  +  LDQS +
Sbjct: 15  NVIRSEYFEEKLKYKVLSKALIENK--IAADLGCGTGFISLALSEK--ANLIFSLDQSNN 70

Query: 146 QLAKAKQ---KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
            L + K+   K  +     ++ + E++    +  D      ++ +  + ++ I E YRVL
Sbjct: 71  MLKELKKEVSKRDITNIYPIKSNVENIVLFDESVDVVFINMALHHVANIEKAISEIYRVL 130

Query: 203 KLGGKACIIGPV--YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           K GG + +I  V  +   W      D W+ F   ++   W  K  FK+++++ 
Sbjct: 131 KKGG-SVVISDVTEHDGEWAKEEMYDEWLGFSN-DQITNWLNKYSFKNIEIEN 181


>gi|424902524|ref|ZP_18326040.1| methyltransferase, UbiE/COQ5 family protein [Burkholderia
           thailandensis MSMB43]
 gi|390932899|gb|EIP90299.1| methyltransferase, UbiE/COQ5 family protein [Burkholderia
           thailandensis MSMB43]
          Length = 257

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +   A+ V   D +P  LA    A ++  L + +I +G AE LP
Sbjct: 51  VLDLGCGAGHASFAAARG-GAQEVIAYDLAPQMLATVEAAARERGLADVRIEQGAAERLP 109

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSRYFADV 227
           F     D  VS  S  +W D  R + EA RVLK GG+     I G  +P   +  +   V
Sbjct: 110 FADASFDWIVSRMSAHHWHDVPRALGEARRVLKPGGRVLFVDIAGADHPL--VDTHLQTV 167

Query: 228 WMLFP-------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
            +L         + +E++ +F +AGF    + R+  +W
Sbjct: 168 ELLRDASHVRDYRADEWLAFFAQAGF----VARVRERW 201


>gi|241207317|ref|YP_002978413.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861207|gb|ACS58874.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 258

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF T   D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFETGSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|357059369|ref|ZP_09120211.1| hypothetical protein HMPREF9334_01928 [Selenomonas infelix ATCC
           43532]
 gi|355371446|gb|EHG18790.1| hypothetical protein HMPREF9334_01928 [Selenomonas infelix ATCC
           43532]
          Length = 216

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL 169
           V+D+G G G T   + + V   ++T +D +   +  ++            +I+ G  E L
Sbjct: 56  VLDIGCGGGNTLARMAERVTEGHLTGIDYAETSVEASRTFNAALVDAGRMEILHGSVEAL 115

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR----YFA 225
           PF   + D  V+  S  +WP P++ + E  RV+K GG   ++  +Y    L        A
Sbjct: 116 PFADAHFDAVVTVESFYFWPSPEKSLEEVARVVKKGGTFLLLAEIYGRDDLPEGIRAKVA 175

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLK-RIGPKW 258
              +  P  EE+   F+ AGF +V L  + G  W
Sbjct: 176 GYDLTNPTPEEFDRLFRAAGFSEVTLHFKDGEYW 209


>gi|395764906|ref|ZP_10445526.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella sp. DB5-6]
 gi|395413723|gb|EJF80185.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella sp. DB5-6]
          Length = 262

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 33/184 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA---KAKQKEPLK 157
           L P  LSN    V+DV GGTG     I+     K +VT+LD +   L+   K  QK  L 
Sbjct: 68  LSPPALSNWK--VLDVAGGTGDIAFRILNASRQKAHVTVLDINGSMLSIGKKRAQKNGLT 125

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                VE +AE LPF     D Y  A  I   P   + +REA+RVLK  G+  C      
Sbjct: 126 PLINFVESNAEHLPFEDQSFDAYTIAFGIRNVPYIDKALREAFRVLKPSGRFLCLEFSNV 185

Query: 210 ---IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              ++  +Y  +                   RY  +    FPK++++     +AGF  V 
Sbjct: 186 EMPLLDKIYDLWSFHAIPKLGQFIANDGDAYRYLVESIRKFPKQDDFAHMINRAGFSRVS 245

Query: 251 LKRI 254
            + +
Sbjct: 246 YRNL 249


>gi|268317880|ref|YP_003291599.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus
           marinus DSM 4252]
 gi|262335414|gb|ACY49211.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus
           marinus DSM 4252]
          Length = 245

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 30/169 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVE-GDAEDL 169
           V+DV  GT    + + + +  + V  +D +   L   +QK     L E  ++  GDAE L
Sbjct: 63  VLDVATGTADLAIEVARRLPVERVVGVDIAESMLQVGRQKVDRLGLSERVVLRRGDAEKL 122

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTF----- 218
           PF     D  + A  +  + + +RG+RE+YRVL+ GG   ++       PV  T      
Sbjct: 123 PFSDAQFDAVLVAFGVRNFENLERGLRESYRVLRPGGVLVVLEFSRPRTPVIRTLYRWYA 182

Query: 219 ---------WLS------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
                    WLS      RY       FP   +++   +K GF+D+Q K
Sbjct: 183 HHVLPRIGAWLSRDEGAYRYLPASVEAFPDGPDFLRRMEKVGFRDLQWK 231


>gi|167835843|ref|ZP_02462726.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
           thailandensis MSMB43]
          Length = 251

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +   A+ V   D +P  LA    A ++  L + +I +G AE LP
Sbjct: 45  VLDLGCGAGHASFAAARG-GAQEVIAYDLAPQMLATVEAAARERGLADVRIEQGAAERLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSRYFADV 227
           F     D  VS  S  +W D  R + EA RVLK GG+     I G  +P   +  +   V
Sbjct: 104 FADASFDWIVSRMSAHHWHDVPRALGEARRVLKPGGRVLFVDIAGADHPL--VDTHLQTV 161

Query: 228 WMLFP-------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
            +L         + +E++ +F +AGF    + R+  +W
Sbjct: 162 ELLRDASHVRDYRADEWLAFFAQAGF----VARVRERW 195


>gi|432432285|ref|ZP_19674716.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE187]
 gi|432842468|ref|ZP_20075895.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE141]
 gi|433206378|ref|ZP_20390085.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE97]
 gi|430953197|gb|ELC72105.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE187]
 gi|431397747|gb|ELG81181.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE141]
 gi|431733791|gb|ELJ97197.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE97]
          Length = 256

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G  E +P
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYVESMP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LKLGGK  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKLGGKLIVMDVMSP 151


>gi|350264668|ref|YP_004875975.1| methyltransferase domain-containing protein [Bacillus subtilis
           subsp. spizizenii TU-B-10]
 gi|349597555|gb|AEP85343.1| methyltransferase domain family [Bacillus subtilis subsp.
           spizizenii TU-B-10]
          Length = 198

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 10/141 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++       +  +D S   L  A ++   KE ++++G  E  P   
Sbjct: 47  ILEVGFGPGYCMQQMLNREKDIRLDGIDVSEAMLKLAARRVKTKEVRLIQGSVETFPLNA 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +G+++ +R LK GGKA I         +    AD      K
Sbjct: 107 SFYDKVISVNNYTIWNDQTKGMKQIFRALKPGGKAAIT--------MQPREADASPEKTK 158

Query: 234 E--EEYIEWFQKAGFKDVQLK 252
              ++ I  F+ AGF+D++L+
Sbjct: 159 SFGKQMIADFKAAGFQDIELQ 179


>gi|268323945|emb|CBH37533.1| conserved hypothetical protein, methyltransferase domain family
           [uncultured archaeon]
          Length = 213

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA----KQKEPLKECKIVEG 164
           N++  ++DVG G G T   + K      V  +D S   +A A    K+     + +I+  
Sbjct: 47  NKDYTILDVGCGGGKTVNTLAKMAAEGKVYGIDYSEDSVAVASKINKRYIDTGKVEILHA 106

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
             E LPFP D+ D   +  +  +WPD    + E  RVLK GG   +I  VY      +  
Sbjct: 107 SVESLPFPDDFFDLVTAVETYYFWPDLIDNLMELRRVLKEGGSVVLISEVYRHERFEKRN 166

Query: 225 ADVWML----FPKEEEYIEWFQKAGFKDVQLKRIGPK 257
           A+   L    +   EE+ E+   AG+  + +  +  K
Sbjct: 167 ANWARLGDFTYHLPEEFREFLGDAGYSSITVDVLEDK 203


>gi|30249133|ref|NP_841203.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Nitrosomonas europaea ATCC 19718]
 gi|48474814|sp|Q81ZZ8.1|UBIE_NITEU RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|30180452|emb|CAD85057.1| UbiE; ubiquinone/menaquinone biosynthesis methlytransferase
           [Nitrosomonas europaea ATCC 19718]
          Length = 244

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 28/165 (16%)

Query: 114 VVDVGGGTG-FTTLGIVKHVDAKNV--TILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+ GGT   T L + K      V  T ++ S   + + +     K   + + DAE LP
Sbjct: 63  VLDIAGGTADLTRLFLEKTGSTGEVWLTDINNSMLSIGRDRMLNDGKSVPVAQCDAEKLP 122

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPVYPTFWLS 221
           FP +Y DR   A  +         +RE +RVL  GG   +         + P+Y T+   
Sbjct: 123 FPDNYFDRVCVAFGLRNMTHKDAALREMWRVLSPGGSLIVLEFSKVWKPLQPLYDTYSFK 182

Query: 222 ----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
                           RY A+   + P +EE  +  Q+AGF+ V+
Sbjct: 183 ALPFMGKIVARDDTSYRYLAESIRMHPSQEELKQLMQQAGFERVE 227


>gi|114705025|ref|ZP_01437933.1| ubiquinone/menaquinone biosynthesis methyltransferase [Fulvimarina
           pelagi HTCC2506]
 gi|114539810|gb|EAU42930.1| ubiquinone/menaquinone biosynthesis methyltransferase [Fulvimarina
           pelagi HTCC2506]
          Length = 259

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    +   T+LD +   L     +A +K      + VE +AEDL
Sbjct: 76  LDVAGGTGDVAFRIVERTGRRVEGTVLDINASMLGVGAERAARKGISDNLRFVEANAEDL 135

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
             P    D Y  A  I   P   R + EAYRVLK GG+  C+         +  +Y T+ 
Sbjct: 136 GLPDSQFDAYTIAFGIRNVPRIDRALAEAYRVLKPGGRFLCLEFSEVDVPGLDALYETWS 195

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                              Y  +    FP +E +    +KAGF+ V  + +
Sbjct: 196 FKGIPAIGQRVANDRESYEYLVESIRRFPNQENFAGLIRKAGFERVTYRNL 246


>gi|110634437|ref|YP_674645.1| type 11 methyltransferase [Chelativorans sp. BNC1]
 gi|110285421|gb|ABG63480.1| Methyltransferase type 11 [Chelativorans sp. BNC1]
          Length = 258

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 11/115 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  T  I   V  + V   D SP  L    +  ++  L       G AE LP
Sbjct: 49  VLDLGCGGGHVTFHIAPLV--REVVAYDLSPEMLEVVGRTARERGLANIATARGVAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG------PVYPTFW 219
           F  D  D  +S  S  +W D   G+REA RVLK GG   I+       P+  TF+
Sbjct: 107 FEADSFDAVLSRFSAHHWRDLDAGLREAARVLKPGGSVIILDTVTAGVPIIDTFF 161


>gi|302556575|ref|ZP_07308917.1| methyltransferase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302474193|gb|EFL37286.1| methyltransferase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 283

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGD 165
           +R  +V+D+G G G ++  I + +  + +  LD +P  LA+A+++    P      VEGD
Sbjct: 56  DRLGVVLDIGCGRGTSSRVIAEQLRPERLVGLDAAPSLLAQARERAKDLPDSTVDFVEGD 115

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
             DLP P   +D  V+A  + + P PQ  + +  RVL  GG A ++
Sbjct: 116 FHDLPLPDGSSDIVVAAFCLYHSPRPQDVVGQIARVLAPGGVAVLV 161


>gi|448622797|ref|ZP_21669446.1| methyl transferase-like protein [Haloferax denitrificans ATCC
           35960]
 gi|445753305|gb|EMA04722.1| methyl transferase-like protein [Haloferax denitrificans ATCC
           35960]
          Length = 193

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 28/189 (14%)

Query: 75  WFYRFLSIVYDHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH 131
           +F RF + VYD V+   +PG         AL+ AD       VVD+GGG+G  TL +   
Sbjct: 9   FFDRF-APVYDLVMPPADPGALGT-----ALDRADRPVER--VVDIGGGSGRATLAL--- 57

Query: 132 VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
            D     +LD+S   L +A+Q+    +C  V GDA +LPF  D  D      +  + P+ 
Sbjct: 58  -DVPERIVLDRSAGMLRRARQRG--LDC--VRGDARELPFADDALDAVTVVDAFHHMPN- 111

Query: 192 QRGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKA 244
           QRG+  E +RVL  GG    +    P   L R       +      F   +E + + ++ 
Sbjct: 112 QRGVAEEVFRVLAPGG-VFAVNEFDPDTLLGRGLVAAERVVGFGSAFAAPDELVRFLERV 170

Query: 245 GFKDVQLKR 253
           GF    ++R
Sbjct: 171 GFDAEVVER 179


>gi|443633915|ref|ZP_21118091.1| putative methyltransferase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
 gi|443346111|gb|ELS60172.1| putative methyltransferase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
          Length = 198

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 29/174 (16%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K     ++  +D S   L  A ++   K  ++++G  E  P   
Sbjct: 47  ILEVGFGPGYCMQQVLKREKDVDLHGIDVSEVMLKLAARRVKSKPVRLIQGSVETFPLTD 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + ++ +S  +   W D  +G+++ YR LK GGKA I         +    AD     PK
Sbjct: 107 SFYNKVISVNNYTIWNDQTKGMKQIYRALKPGGKAAIT--------MQPREADAS---PK 155

Query: 234 E-----EEYIEWFQKAGFKDVQL--KRIGPKWYRGVRRHGLIMGCSVTGVKPAS 280
           +     ++ I  F+ AGF+D++L  K I P+           +   VT  KPA+
Sbjct: 156 KTKSFGKQMIADFKAAGFEDIELQFKNIKPE-----------LSVCVTAKKPAT 198


>gi|428204797|ref|YP_007100423.1| type 11 methyltransferase [Chroococcidiopsis thermalis PCC 7203]
 gi|428012916|gb|AFY91032.1| Methyltransferase type 11 [Chroococcidiopsis thermalis PCC 7203]
          Length = 228

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQ--KEPLKECKI 161
           A L +R+  V D G GT   +L + K V  K +VT +D S   LAKA Q   E   +C +
Sbjct: 60  AHLHDRST-VCDCGIGTADFSLALAKTVSPKLHVTGVDISLEMLAKANQLLVEAGIDCHV 118

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF--W 219
            + D + LPF  +  D  +SA  +E+  +P RG++E  RVL+      ++    P    W
Sbjct: 119 YQSDVDRLPFDDNTFDLVLSAHMLEHLANPTRGLKEMVRVLRPNAPL-VLTVTRPGLLGW 177

Query: 220 LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
             ++      + PKE  ++    +AG  D++
Sbjct: 178 CIQWHWGNGCISPKELTHL--MAEAGLSDIR 206


>gi|340371279|ref|XP_003384173.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
           mitochondrial-like [Amphimedon queenslandica]
          Length = 252

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-----------NVTILDQSPHQLAKAKQKEPLKE-CKI 161
           ++DV GGTG     IV++ D +            VT++D +   L + +++    E  K 
Sbjct: 60  IIDVAGGTGDIASRIVQYSDRRVGGAESSDEELQVTVVDINKEMLTEGEKRFKNNENIKW 119

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           V GDA  LPFP+++ D Y  A  I    + ++ + EAYRV+K GG+
Sbjct: 120 VHGDALSLPFPSNHFDAYTIAFGIRNVSNFEQALSEAYRVIKEGGR 165


>gi|255003420|ref|ZP_05278384.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Anaplasma marginale str. Puerto Rico]
          Length = 232

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 30/178 (16%)

Query: 107 LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVE 163
           +++++  ++DV GGTG   +  +      +VT+ D +P  L   + +           V 
Sbjct: 41  ITHKSGTLLDVAGGTGDVAMRALARRSGLHVTVCDINPDMLGVGRDRAINSGYANISWVC 100

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI-IGPV------- 214
             AEDLPF ++  D Y  A  I   P+ ++ ++EA+RVLKL G+  C+   P+       
Sbjct: 101 ASAEDLPFASNSFDYYTIAFGIRNIPNREKALQEAHRVLKLQGRFLCLEFSPIQKQGLFR 160

Query: 215 -----YPTFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                Y  + +               Y  D    FP  EE+ +    AGF +V  + I
Sbjct: 161 TLYDLYSAYVIPNMGRCVAGNAEAYTYLTDSIRAFPPPEEFAQAISGAGFFNVAHQNI 218


>gi|399517559|ref|ZP_10759108.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Leuconostoc pseudomesenteroides 4882]
 gi|398647550|emb|CCJ67135.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Leuconostoc pseudomesenteroides 4882]
          Length = 236

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    + + +  D    +T LD S   L   + K  L +      +V+GDA  
Sbjct: 52  IIDLATGTADWAIALAEKSDPTAKITGLDFSREMLTVGQHKVDLSDYADKITLVQGDAMA 111

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF  ++ D       +   PDP +G+RE YRVLK GG+  ++       P+   FW   
Sbjct: 112 LPFEDNHFDIVTIGFGLRNLPDPIQGLREMYRVLKPGGQLVVLETSQPDNPIVKPFW-RL 170

Query: 223 YFADVWMLFPK 233
           YF  V  L  K
Sbjct: 171 YFGQVMPLLGK 181


>gi|347549330|ref|YP_004855658.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Listeria ivanovii subsp. ivanovii PAM 55]
 gi|346982401|emb|CBW86397.1| Putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Listeria ivanovii subsp. ivanovii PAM 55]
          Length = 237

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + LA  ++K     L   +++ G+A  L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLAVGREKVQEADLHNVELIHGNAMSL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + P++  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 170 FRYVMPIFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|422419553|ref|ZP_16496508.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           seeligeri FSL N1-067]
 gi|422422648|ref|ZP_16499601.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           seeligeri FSL S4-171]
 gi|313632622|gb|EFR99607.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           seeligeri FSL N1-067]
 gi|313637158|gb|EFS02690.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           seeligeri FSL S4-171]
          Length = 237

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 36/170 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKEC-----KIVEGDAE 167
           V+DV  GT   ++ + + +  + +VT LD S + LA  ++K  LKE      ++V G+A 
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSDNMLAVGREK--LKEADVHNVELVHGNAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI--------------- 210
            LPFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI               
Sbjct: 109 SLPFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFN 167

Query: 211 -----IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
                + PV+  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 168 AYFRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|258513870|ref|YP_003190092.1| type 11 methyltransferase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777575|gb|ACV61469.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
          Length = 201

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL 169
           N +V+DVG GTG     + + V     +  +D +   L  A  K       I+  D  +L
Sbjct: 41  NSVVLDVGTGTGVLIPWLKEAVGLTGKIIAVDFAEEMLQFAIAKNFGSSVNILSADVHNL 100

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           PF  DY D  V   +  ++ +    ++E  RVLK GG+  I  P  P   L+ +  ++  
Sbjct: 101 PFENDYFDEVVCNSAFPHFHNKPLAMQEMTRVLKPGGRLSICHPA-PREELNSFHRNLGG 159

Query: 230 -----LFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259
                + P EEE +    ++G  ++++K  GP+ Y
Sbjct: 160 VVANDMLPAEEEMVSIANRSGLTNIEIKD-GPQTY 193


>gi|346994459|ref|ZP_08862531.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Ruegeria sp. TW15]
          Length = 250

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAEDL 169
           ++DV GGTG  +   ++     + T+LD +   L + +Q+    +       V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLRRAGHGHATVLDLTEPMLVEGRQRAEADQMSDSLNWVVGDAMSL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTFW 219
           PF  +  D Y  +  I     PQ  + EAYRVLK GG+  +          +  +Y  + 
Sbjct: 127 PFEDNTFDVYTISFGIRNVTRPQEALNEAYRVLKPGGRLMVLEFSQLPNDGLQKLYDLYS 186

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +E ++   + AGF++ + + +
Sbjct: 187 FNVIPRMGKLIANDYDSYQYLVESIRKFPDQETFLSIVRAAGFENAKYRNL 237


>gi|325289000|ref|YP_004265181.1| methyltransferase type 11 [Syntrophobotulus glycolicus DSM 8271]
 gi|324964401|gb|ADY55180.1| Methyltransferase type 11 [Syntrophobotulus glycolicus DSM 8271]
          Length = 208

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 21/150 (14%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           +M V++V  GTG   LGI K V  + V   D SP  +  AK+K      K    DA  L 
Sbjct: 41  DMRVLEVATGTGLIALGIAKFV--RQVEATDFSPKMIETAKKKIVPSNVKFSIEDATALS 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F  D  D  + + ++   PDP+  +    RVLK GG       + PTF         W L
Sbjct: 99  FAHDSFDAVIISNALHIMPDPEAALGSIRRVLKPGGLL-----IAPTFAHGHLKNSTWNL 153

Query: 231 FPK--------------EEEYIEWFQKAGF 246
             K               EEY  + +K GF
Sbjct: 154 NAKILKLIGFETYSKWTPEEYTRFIEKNGF 183


>gi|300988188|ref|ZP_07178589.1| methyltransferase domain protein [Escherichia coli MS 45-1]
 gi|301050545|ref|ZP_07197418.1| methyltransferase domain protein [Escherichia coli MS 185-1]
 gi|300297753|gb|EFJ54138.1| methyltransferase domain protein [Escherichia coli MS 185-1]
 gi|300407502|gb|EFJ91040.1| methyltransferase domain protein [Escherichia coli MS 45-1]
          Length = 256

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G  E LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNIPTRQGYVESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LKLGGK  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKLGGKLIVMDVMSP 151


>gi|448592405|ref|ZP_21651512.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax elongans
           ATCC BAA-1513]
 gi|445731410|gb|ELZ82994.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax elongans
           ATCC BAA-1513]
          Length = 193

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           VVD+GGG+G  TL +    D     + D S   LA+A+ +        V GDA  LPF  
Sbjct: 43  VVDIGGGSGRATLAL----DVPERVVFDLSEEMLARARSRG----LDCVRGDARSLPFAD 94

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           D  D      +  + PD Q  + E YRVL  GG
Sbjct: 95  DSVDAVTVVDAFHHMPDQQTVVEEVYRVLAPGG 127


>gi|389848287|ref|YP_006350526.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax
           mediterranei ATCC 33500]
 gi|448618492|ref|ZP_21666729.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax
           mediterranei ATCC 33500]
 gi|388245593|gb|AFK20539.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax
           mediterranei ATCC 33500]
 gi|445746863|gb|ELZ98321.1| menaquinone biosynthesis methyltransferase UbiE [Haloferax
           mediterranei ATCC 33500]
          Length = 193

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 20/179 (11%)

Query: 75  WFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA 134
           +F RF  + YD V+ P     D  +DAL  AD       VVD+GGG+G  TL +    D 
Sbjct: 9   FFDRFAPL-YDLVMPPAEA--DALEDALARADRPVER--VVDIGGGSGRATLAL----DV 59

Query: 135 KNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRG 194
               +LD+S   L++A+++        V GDA  LPF     D      +  + P  +  
Sbjct: 60  PERIVLDRSAGMLSRARERG----LDCVRGDARSLPFADGSVDAVTVVDAFHHMPSQRTV 115

Query: 195 IREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYIEWFQKAGFK 247
             E YRVL  GG    +    P   L R       +      F   +E   + ++ GF+
Sbjct: 116 AEEVYRVLAPGG-VFAVNEFDPETLLGRGLVVAERVVGFGSSFATPQELTRFLERVGFE 173


>gi|158335894|ref|YP_001517068.1| methyltransferase [Acaryochloris marina MBIC11017]
 gi|158306135|gb|ABW27752.1| methyltransferase, putative [Acaryochloris marina MBIC11017]
          Length = 284

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 19/190 (10%)

Query: 76  FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DA 134
           FY   S  YD     G W   + D  LE A +      V+D+G GTG+  +   + V D 
Sbjct: 16  FYDRRSRSYDQ----GQWHPQICDRLLEYARIGA-GQTVLDIGTGTGYLAIASAQRVGDQ 70

Query: 135 KNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
            +VT +D SP  L +A+   Q+  L    +   DAE L +P+ + D  + A +  +  D 
Sbjct: 71  GHVTGVDISPGMLQQAQRKIQRLGLSNVVVQRADAEALDYPSHHFDVILCAHTFPWMTDK 130

Query: 192 QRGIREAYRVLKLGGKACIIGPVYPTFW----LSRYFADVWM-LFPKE-----EEYIEWF 241
              +R  Y++LK  G+  +  P    +     L R  A+  + L P       E+  + F
Sbjct: 131 AATLRLWYQLLKPRGRIAVHTPADTAYIGAVVLRRVLAEYGLELEPSNRLGSIEQCRQLF 190

Query: 242 QKAGFKDVQL 251
           +KAGF+ V++
Sbjct: 191 EKAGFEAVEI 200


>gi|70991851|ref|XP_750774.1| ubiquinone biosynthesis methlytransferase Coq5 [Aspergillus
           fumigatus Af293]
 gi|66848407|gb|EAL88736.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Aspergillus fumigatus Af293]
 gi|159124336|gb|EDP49454.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Aspergillus fumigatus A1163]
          Length = 313

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + +   ++D+ GGTG     ++ H    N      VTI D +P  LA+ K++      
Sbjct: 108 DTTGKGWNILDIAGGTGDIAFRMLDHATNINNDHQTRVTIADINPDMLAEGKKRSISTPY 167

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   +E +A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 168 YNTPRLSFMEANAQHMPNIPDNSVDLYTVVFGIRNFTDKQAALEEAFRVLKPGGVFACME 227

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   +Y  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 228 FSKVDNSLFNAIYKQWSFSAIPLIGQIVAGDRDSYQYLVESIEKFPSQEEFRAMIQKAGF 287


>gi|269958524|ref|YP_003328311.1| ubiquinone/menaquinone biosynthesis methyltransferase [Anaplasma
           centrale str. Israel]
 gi|269848353|gb|ACZ48997.1| ubiquinone/menaquinone biosynthesis methyltransferase [Anaplasma
           centrale str. Israel]
          Length = 232

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 30/180 (16%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKI 161
           + +++R+  ++DV GGTG   +  +      +VT+ D +P  L   + +           
Sbjct: 39  SKITHRSGTLLDVAGGTGDVAMRALARRSGLHVTVCDINPDMLGVGRDRAINSGYANISW 98

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI-IGPV----- 214
           V   AE+LPF ++  D Y  A  I   P+ ++ ++EA+RVLKL G+  C+   P+     
Sbjct: 99  VCASAENLPFASNSFDYYTIAFGIRNIPNREKALQEAHRVLKLQGRFLCLEFSPIQKQGL 158

Query: 215 -------YPTFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                  Y  + +               Y  D    FP  EE+ +    AGF +V  + I
Sbjct: 159 FRTLYDLYSAYVIPNMGRCVAGNAEAYTYLTDSIRAFPPPEEFAQAISGAGFFNVAHQNI 218


>gi|144900119|emb|CAM76983.1| ubiE/COQ5 methyltransferase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 265

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 25/179 (13%)

Query: 99  DDALEPADLSNRNM---------------LVVDVGGGTGFTTLGIVKHV-DAKNVTILDQ 142
           DD LE A   N  +               +VVD+G G GF        V ++ +V  +D 
Sbjct: 55  DDDLEAAGAGNLGLGCGNPQAIAAMRPGEVVVDLGSGAGFDCFLAAAQVGESGHVIGIDM 114

Query: 143 SPHQLAKAKQ---KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAY 199
           +   LAKA+    K  L + +   G+ E LP   + AD  +S   I   PD    +REA+
Sbjct: 115 THEMLAKARDNAAKLGLTQVEFRLGEIEHLPIADNVADVVISNCVINLSPDKPGVLREAF 174

Query: 200 RVLKLGGKACIIGPV----YPTFWLSR--YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
           RVLK GG+  +   V     P    +R   FA         ++   W  +AGF D++++
Sbjct: 175 RVLKPGGRVAVSDVVMLKTLPPELATRTELFAGCVGGAASADDLRRWLGEAGFVDIKVE 233


>gi|116748631|ref|YP_845318.1| type 11 methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116697695|gb|ABK16883.1| Methyltransferase type 11 [Syntrophobacter fumaroxidans MPOB]
          Length = 209

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 114 VVDVGGGTGFTTL-GIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           ++D+G G G   +   V    A  V  LD +P  L +A++   +  LK    VEG AE+L
Sbjct: 87  ILDIGCGAGVDAIVAGVMTGPAGAVVGLDLTPEMLERARRNLSRTSLKNVSFVEGSAENL 146

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           PFP    D  +S G+    PD  + +RE  RVLK  G+
Sbjct: 147 PFPEASFDVVISNGAFNLVPDKLQALREVIRVLKPNGR 184


>gi|407798982|ref|ZP_11145884.1| hypothetical protein OCGS_0957 [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407058988|gb|EKE44922.1| hypothetical protein OCGS_0957 [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 243

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V++VG G G          + + VT +D S   +A+     P     +V+G AEDLPF  
Sbjct: 36  VLNVGAGAG------SYEPEGRAVTAIDPSARMIAQ----RPPSGTVVVQGHAEDLPFAD 85

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML--- 230
           D  D  ++  ++ +W D  RG+ E  RV +         P +  FWL  YF ++  L   
Sbjct: 86  DAFDGAMAVLTVHHWTDKARGVAEMRRVARGPVVILTYDPAFRDFWLFDYFPEIAALDEG 145

Query: 231 -FPKEEEYIEWF 241
             P  + + +WF
Sbjct: 146 QMPPMDAFGQWF 157


>gi|425469720|ref|ZP_18848633.1| putative enzyme [Microcystis aeruginosa PCC 9701]
 gi|389880410|emb|CCI38840.1| putative enzyme [Microcystis aeruginosa PCC 9701]
          Length = 207

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 19/168 (11%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
            R  ALE   +S +N  ++D+  G G TT  +V   D  + T LD SP  L +A    P 
Sbjct: 33  FRQLALEGLKIS-KNDPILDLCCGAGQTTRYLVPLSD--HCTGLDVSPRALERASLAVP- 88

Query: 157 KECKIVEGDAEDLPFPT-DYADRYVSAGSIEYWPDP-QRGIREAYRVLKLGGKACIIG-- 212
            +   VEG AE +PF   ++A  + SA   E  P+  Q  ++E YRVL+ GG   ++   
Sbjct: 89  -QAHYVEGLAEKMPFNAGEFAFVHTSAALHEMEPEQLQEILKEVYRVLRPGGIFALVDFH 147

Query: 213 -PVYPTFWLSRYFADVWMLFPK-------EEEYIEWFQKAGFKDVQLK 252
            P  P FW S   A    LF         + + I+  Q  GF+D Q K
Sbjct: 148 RPTNPLFWPS--LALFLQLFETHTAWQFIDRDLIQSLQAIGFRDCQQK 193


>gi|119470058|ref|XP_001258001.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Neosartorya fischeri NRRL 181]
 gi|119406153|gb|EAW16104.1| ubiquinone biosynthesis methlytransferase Coq5, putative
           [Neosartorya fischeri NRRL 181]
          Length = 313

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + +   ++D+ GGTG     ++ H    N      VTI D +P  LA+ K++      
Sbjct: 108 DTTGKGWNILDIAGGTGDIAFRMLDHATNINNDHQTRVTIADINPDMLAEGKKRSIDTPY 167

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   +E +A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 168 YNTPRLSFMEANAQHMPSIPDNSVDLYTVVFGIRNFTDKQAALEEAFRVLKPGGVFACME 227

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   +Y  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 228 FSKVDNSLFNAIYKQWSFSAIPLIGQIVAGDRDSYQYLVESIEKFPSQEEFRTMIQKAGF 287


>gi|451811936|ref|YP_007448390.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Kinetoplastibacterium galatii TCC219]
 gi|451777838|gb|AGF48786.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Kinetoplastibacterium galatii TCC219]
          Length = 256

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 38/176 (21%)

Query: 112 MLVVDVGGGTG-FTTLGIVKH-------VDAKNVTILDQSPHQLAKAKQKEPLKECKIVE 163
           M ++D+ GGTG    + I  H       +   NV +L+   ++L       P+  C    
Sbjct: 72  MKILDIAGGTGDLARMFIDTHRKNVEVWLTDINVNMLNVGCNRLINRGYVLPIVAC---- 127

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK------ACIIGPV--- 214
            DAE LPFP+ Y DR   +  +    D  R + E  RVLK GGK      + II P+   
Sbjct: 128 -DAEALPFPSSYFDRISVSFGLRNMTDKMRAMSEMRRVLKPGGKLLILEFSHIIEPLKAL 186

Query: 215 --YPTF----WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             Y +F    WL           RY  +   + PK+E   +    +GF+ V+   I
Sbjct: 187 YDYYSFKFLPWLGSKITGDGDSYRYLVESIRMHPKQEVLAQMMTDSGFRKVKFSNI 242


>gi|298250548|ref|ZP_06974352.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
 gi|297548552|gb|EFH82419.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
          Length = 213

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 15/156 (9%)

Query: 113 LVVDVGGGTGFTTLG----IVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           LV++VG G G          V+ V+A   T LD S    A+A+ +       + + + E 
Sbjct: 47  LVLEVGAGNGLNFACYDPEFVERVEA---TELDNSMLSYARARAQSAPVSVTLTQANVEQ 103

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF   Y D  V         DP RG++E  RVLK GG+  +I  V     +     D+ 
Sbjct: 104 LPFADAYFDCIVCTLVFCSVNDPLRGLQEMRRVLKPGGQLLMIEHVRAQKRMLALLQDLI 163

Query: 229 MLFPK--------EEEYIEWFQKAGFKDVQLKRIGP 256
               +            ++  Q+AGF+D++L+ + P
Sbjct: 164 TPLTRLLLGNCHWNRSTVQTVQEAGFQDIRLEHLTP 199


>gi|113477721|ref|YP_723782.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110168769|gb|ABG53309.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 212

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 19/177 (10%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
            R  ALE   +   N  ++D+  G+G  T  + K+  +++VT LD SP  + +AK+  P 
Sbjct: 33  FRQLALE-GLIIEENTQILDLCCGSGQGTNFLAKY--SQSVTGLDASPLSINRAKKNVP- 88

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIE--YWPDPQRGIREAYRVLKLGGKACII--- 211
              K VEG AED+PF ++  D   ++ ++    +   ++ I+E YRVLK  G    +   
Sbjct: 89  -SAKYVEGFAEDMPFSSNQFDLVHTSAALHEMNYEQLRQIIQEVYRVLKPSGIFTFVDFH 147

Query: 212 GPVYPTFWLSRYFADVWMLFPKEEEY-------IEWFQKAGFKDVQLKRIGPKWYRG 261
            P  P FW    FA    LF  E  +       +E     GF  V  K   P  Y G
Sbjct: 148 SPTNPLFWPG--FAMFLWLFETETSWKFINTNILELLTTIGFNLVDTKLPLPILYAG 202


>gi|402218578|gb|EJT98654.1| UbiE/COQ5 methyltransferase [Dacryopinax sp. DJM-731 SS1]
          Length = 249

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 43/195 (22%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQ 146
           W +D    +L+P      N  V+DV GGTG   L I+ H   K       VT++D +P  
Sbjct: 28  WKDDFVRHSLDPGRRGPLN--VLDVAGGTGDIALRILDHAREKYADRETTVTMVDLNPEM 85

Query: 147 LAKAKQK------EPLKECKIVEGDAEDLP---FPTDYADRYVSAGSIEYWPDPQRGIRE 197
           L + + +          +   V  +A++LP   FP+D AD Y  A  I         ++ 
Sbjct: 86  LQEGRTRFKKTMYHNTPQIDFVVANAQELPEDTFPSDSADLYTIAFGIRNCTSIPDVLKS 145

Query: 198 AYRVLKLGGK-ACI-----IGPVYPTFWLSRYFADVWML--------------------F 231
           AYRVLK GG  AC+     I P++   +    F+ + +L                    F
Sbjct: 146 AYRVLKPGGVFACLEFSIPINPLFRRVYDDYSFSIIPLLGTILAGDRESYQYLVESIRKF 205

Query: 232 PKEEEYIEWFQKAGF 246
           P + E+ +  + AGF
Sbjct: 206 PTQPEFAQMIRDAGF 220


>gi|374856572|dbj|BAL59425.1| methyltransferase type 11 [uncultured candidate division OP1
           bacterium]
          Length = 194

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 18/158 (11%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK--EPLKECKIVEGDAEDLPFP 172
           +++G G G TT  I+K     ++T LD  P Q+A+A+++         I +GDA  L FP
Sbjct: 42  LELGCGQGITTEEILKRFPRLHLTALDYDPDQVARAQERVTHFSDRISIHQGDATALSFP 101

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM-LF 231
            D+ D   +     +  + +R + EA RVLK  G+      +Y   +  R+F  +   LF
Sbjct: 102 DDHWDVIFACNLFHHMREYRRALAEAARVLKPTGR------LYVMDFDRRFFNPILRKLF 155

Query: 232 PKE-----EEYIEWFQKAGFKDVQLKR-IGPKWYRGVR 263
           P E     EE+I+   KAG   + ++R +G  W   VR
Sbjct: 156 PPEVLFTREEFIQDVHKAG---LHVERSVGGPWVFFVR 190


>gi|346307013|ref|ZP_08849161.1| hypothetical protein HMPREF9457_00870 [Dorea formicigenerans
           4_6_53AFAA]
 gi|345907377|gb|EGX77088.1| hypothetical protein HMPREF9457_00870 [Dorea formicigenerans
           4_6_53AFAA]
          Length = 203

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+G GTG     I      K ++ +D SP+ + +AK+K      K+  GDAE+LPF  
Sbjct: 48  LLDLGCGTGALLESIFNLHITKQLSGIDLSPNMIEEAKKKIG-DNAKLYIGDAENLPFED 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
              D  +   S  ++P P + ++E  RVLK GG
Sbjct: 107 SLFDTVICNDSFHHYPSPDKVVKEVSRVLKKGG 139


>gi|217978389|ref|YP_002362536.1| ubiquinone/menaquinone biosynthesis methyltransferase [Methylocella
           silvestris BL2]
 gi|217503765|gb|ACK51174.1| ubiquinone/menaquinone biosynthesis methyltransferase [Methylocella
           silvestris BL2]
          Length = 249

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQL----AKAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     I +    A  + +LD +   L    A+A ++      + V+ +AEDL
Sbjct: 66  LDVAGGTGDIAFRIAEAGTRATEIVVLDINADMLEVGRARAAKRRFEARLEFVQANAEDL 125

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG------PVYPTFWLS-- 221
           PF  +  D Y  A  I   P  +R + EA RVLK GG+   +       P++   + +  
Sbjct: 126 PFEDNSFDAYTIAFGIRNVPRIERALSEARRVLKRGGRFLCLEFSHVDLPLFDRLYKAYS 185

Query: 222 ------------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                             RY  +    FP+ E + +   +AGF      R+
Sbjct: 186 FAAIPRLGKLVTGDEESYRYLVESIERFPEAEAFRQMIARAGFDRADFTRL 236


>gi|300693421|ref|YP_003749394.1| o-methyl transferase RhiI [Ralstonia solanacearum PSI07]
 gi|299075458|emb|CBJ34752.1| RhiI O-methyl transferase, rhizoxin biosynthesis [Ralstonia
           solanacearum PSI07]
 gi|344169377|emb|CCA81719.1| RhiI O-methyl transferase, rhizoxin biosynthesis [blood disease
           bacterium R229]
          Length = 288

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 16/135 (11%)

Query: 88  INPGHWTEDMRDDALEPADLSNR---NML-------------VVDVGGGTGFTTLGIVKH 131
           +N G+  ED R D +  ADL  +   N++             V+++G G G     + ++
Sbjct: 31  LNYGYLAEDSRFDWIHEADLEQKCSANLIRTLLGDADLRGKKVLEIGSGRGGNCSYLARY 90

Query: 132 VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
             A +VT LD  P  +    +   L+    V GDA DLPF  +  D  V+  S   +PD 
Sbjct: 91  AGAASVTGLDFCPAHIEFCDRVHRLEGVSFVGGDAMDLPFDDETFDVVVNIESSHAYPDL 150

Query: 192 QRGIREAYRVLKLGG 206
            R   E  RVLK GG
Sbjct: 151 NRFGEEVRRVLKKGG 165


>gi|198245521|ref|YP_002214215.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207855771|ref|YP_002242422.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|375117692|ref|ZP_09762859.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|417339418|ref|ZP_12120985.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Baildon str. R6-199]
 gi|436725670|ref|ZP_20519062.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE30663]
 gi|436803141|ref|ZP_20525639.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS44]
 gi|437160759|ref|ZP_20694832.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE15-1]
 gi|437176669|ref|ZP_20703473.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_56-3991]
 gi|437328981|ref|ZP_20741071.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 17927]
 gi|437338690|ref|ZP_20743895.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS4]
 gi|437870406|ref|ZP_20848362.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 6.0562-1]
 gi|438105103|ref|ZP_20866169.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 62-1976]
 gi|445144005|ref|ZP_21386754.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Dublin str. SL1438]
 gi|445153379|ref|ZP_21391374.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Dublin str. HWS51]
 gi|445175259|ref|ZP_21397326.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE8a]
 gi|445215182|ref|ZP_21401828.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 20037]
 gi|445258920|ref|ZP_21409621.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 436]
 gi|445339263|ref|ZP_21416325.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 18569]
 gi|197940037|gb|ACH77370.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|206707574|emb|CAR31848.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326621959|gb|EGE28304.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|357960386|gb|EHJ84242.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Baildon str. R6-199]
 gi|434956815|gb|ELL50521.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS44]
 gi|434983688|gb|ELL75476.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE30663]
 gi|435146272|gb|ELN33065.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE15-1]
 gi|435155394|gb|ELN41938.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_56-3991]
 gi|435190512|gb|ELN75094.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 17927]
 gi|435196081|gb|ELN80437.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS4]
 gi|435321712|gb|ELO94103.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 62-1976]
 gi|435335108|gb|ELP05442.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 6.0562-1]
 gi|444847145|gb|ELX72295.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Dublin str. SL1438]
 gi|444852587|gb|ELX77664.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Dublin str. HWS51]
 gi|444858597|gb|ELX83580.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE8a]
 gi|444859336|gb|ELX84286.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 20037]
 gi|444872479|gb|ELX96818.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 18569]
 gi|444888816|gb|ELY12334.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 436]
          Length = 256

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYPTFWLSRYFADVWM 229
            + P   +S    D+W+
Sbjct: 148 VMSPGHPVS----DIWL 160


>gi|78067223|ref|YP_369992.1| UbiE/COQ5 methyltransferase [Burkholderia sp. 383]
 gi|77967968|gb|ABB09348.1| UbiE/COQ5 methyltransferase [Burkholderia sp. 383]
          Length = 250

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           +  V+D+G G G  +  +  HV  ++V   D +   LA    A ++  L   +  +G AE
Sbjct: 42  DAAVLDLGCGAGHASFAVAPHV--RDVVAYDLAAQMLATVDAAARERGLANIRTQQGPAE 99

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYF 224
            LPF T   D  VS  S  +W D +  + E  RVLK GG+  +I   G  +P   L  Y 
Sbjct: 100 QLPFETATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNEHPL--LDTYL 157

Query: 225 ADVWMLFP-------KEEEYIEWFQKAGF 246
               +L         + +E++  F+ AGF
Sbjct: 158 QAAEVLRDASHVRDYRADEWLAMFRDAGF 186


>gi|398787729|ref|ZP_10550034.1| type 11 methyltransferase [Streptomyces auratus AGR0001]
 gi|396992692|gb|EJJ03790.1| type 11 methyltransferase [Streptomyces auratus AGR0001]
          Length = 281

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 18/166 (10%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-------CKI 161
           +R   V+DVG G G   + I +   A +VT +  S  Q+A+A     L E        + 
Sbjct: 73  DRGQRVLDVGCGVGQPAMRIARRTGA-HVTGIAISKDQIARATA---LAEGAGLGDRVEF 128

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-------PV 214
              DA +LPFP +  D  ++  SI + PD  R + E  RVL+ GG+  +         P 
Sbjct: 129 RHADAMELPFPDNSFDAAIAIESIFHMPDRGRVLAEIRRVLRPGGRLVLTDFFERGPIPA 188

Query: 215 YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR 260
                + R   D  M   + E+Y+   + AG + V+L  I  +  R
Sbjct: 189 EKQPAVDRLLRDFIMTLARPEDYVPMLRDAGLRFVELLDITEQSVR 234


>gi|421451359|ref|ZP_15900725.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 58-6482]
 gi|396064114|gb|EJI72502.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 58-6482]
          Length = 256

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYPTFWLSRYFADVWM 229
            + P   +S    D+W+
Sbjct: 148 VMSPGHPVS----DIWL 160


>gi|434404159|ref|YP_007147044.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Cylindrospermum stagnale PCC 7417]
 gi|428258414|gb|AFZ24364.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Cylindrospermum stagnale PCC 7417]
          Length = 207

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 9/111 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++DV  G+G  T  +VK+  ++NVT LD SP  L +A+Q  P      VE  AED+P   
Sbjct: 49  ILDVCCGSGQATQVLVKY--SQNVTGLDASPLSLRRAQQNVP--SATYVEAFAEDMPMAD 104

Query: 174 DYADR-YVSAGSIEYWPDPQRGI-REAYRVLKLGGKACII---GPVYPTFW 219
           +  D  + SA   E  P   R I  E YRVLK GG   ++    P  P FW
Sbjct: 105 NLFDVVHTSAALHEMQPAQLRKIINEVYRVLKPGGVFTLVDFHAPTNPIFW 155


>gi|224368627|ref|YP_002602790.1| protein UbiE4 [Desulfobacterium autotrophicum HRM2]
 gi|223691343|gb|ACN14626.1| UbiE4 [Desulfobacterium autotrophicum HRM2]
          Length = 270

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 28/168 (16%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL-DQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           ++DV GGTG            K ++++ D +   + + KQK  +K    V+GDAE + FP
Sbjct: 92  ILDVCGGTGDIASLSASRTGKKGMSVVYDMNLKMIEQGKQK-SIKGVTFVQGDAESISFP 150

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML-- 230
            D  D       I      + G RE +RVLK GG  C +    P   + R+  D++    
Sbjct: 151 DDSFDAVSIGFGIRNVTHLETGFREIFRVLKKGGTMCCLEFSKPDNSVFRFLYDLYSFRI 210

Query: 231 ------------------------FPKEEEYIEWFQKAGFKDVQLKRI 254
                                   FP  EE     +  GFKD++++++
Sbjct: 211 MPLIGGLITGSQEAYTAFPESIRAFPLPEELRLILKDIGFKDIKIRKL 258


>gi|406830077|ref|ZP_11089671.1| type 11 methyltransferase [Schlesneria paludicola DSM 18645]
          Length = 264

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +DVG G G  T  +V+    ++V  +D S  QLA A+ +  L++ +   GDA  LPFP  
Sbjct: 42  LDVGCGNGAFTEMLVEKCAPRSVQGIDPSEEQLAFARIRPALQQAQFRIGDAMKLPFPDA 101

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
             D  V    I + PDP +G+ E  RV+  GG
Sbjct: 102 AFDAAVMPLVIFFVPDPAKGVAEMARVVSPGG 133


>gi|359799126|ref|ZP_09301694.1| methyltransferase [Achromobacter arsenitoxydans SY8]
 gi|359362991|gb|EHK64720.1| methyltransferase [Achromobacter arsenitoxydans SY8]
          Length = 256

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 99  DDALEPADLSNRN--MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQK 153
           +D L+ A ++ R+    V+D+G G G  +  +   V    VT  D S   L   A    K
Sbjct: 31  EDLLQMAGIAGRHPAARVLDLGCGGGHVSFHVAPLV--AQVTAYDLSQQMLDVVAGEAAK 88

Query: 154 EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
             L      +G AE LPF     D  +S  S  +W D  RG+REA+RVLK GG A     
Sbjct: 89  RGLANLGTCQGKAEYLPFGDGEFDLVMSRYSTHHWQDAGRGLREAFRVLKPGGTAVFADV 148

Query: 214 VYP 216
           V P
Sbjct: 149 VSP 151


>gi|56417067|ref|YP_154141.1| ubiquinone/menaquinone biosynthesis methyltransferase [Anaplasma
           marginale str. St. Maries]
 gi|222475433|ref|YP_002563850.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Anaplasma marginale str. Florida]
 gi|255004540|ref|ZP_05279341.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Anaplasma marginale str. Virginia]
 gi|56388299|gb|AAV86886.1| ubiquinone/menaquinone biosynthesis methyltransferase [Anaplasma
           marginale str. St. Maries]
 gi|222419571|gb|ACM49594.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Anaplasma marginale str. Florida]
          Length = 247

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 30/180 (16%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKI 161
           + +++++  ++DV GGTG   +  +      +VT+ D +P  L   + +           
Sbjct: 39  SKITHKSGTLLDVAGGTGDVAMRALARRSGLHVTVCDINPDMLGVGRDRAINSGYANISW 98

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI-IGPV----- 214
           V   AEDLPF ++  D Y  A  I   P+ ++ ++EA+RVLKL G+  C+   P+     
Sbjct: 99  VCASAEDLPFASNSFDYYTIAFGIRNIPNREKALQEAHRVLKLQGRLLCLEFSPIQKQGL 158

Query: 215 -------YPTFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                  Y  + +               Y  D    FP  EE+ +    AGF +V  + I
Sbjct: 159 FRTLYDLYSAYVIPNMGRCVAGNAEAYTYLTDSIRAFPPPEEFAQEIAGAGFFNVAHQNI 218


>gi|149203141|ref|ZP_01880112.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseovarius sp. TM1035]
 gi|149143687|gb|EDM31723.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseovarius sp. TM1035]
          Length = 247

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   +        V GDA  L
Sbjct: 64  LLDVAGGTGDISFRFLKRAGHGHATVLDLTEPMLVEGRKRAEAESMADSLDWVVGDAMAL 123

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----------GPVYPTFW 219
           PFP    D Y  +  I     PQ  + EA+RVLK GG+  ++            VY  + 
Sbjct: 124 PFPDASFDVYTISFGIRNVTRPQEALNEAFRVLKPGGRLMVLEFSQIPNELMQKVYDLYS 183

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +E ++   ++AGF++ + + +
Sbjct: 184 FNIIPRLGQMIANDRDSYQYLVESIRQFPDQETFLGMVRQAGFENAKYRNL 234


>gi|422016106|ref|ZP_16362696.1| type 11 methyltransferase [Providencia burhodogranariea DSM 19968]
 gi|414095553|gb|EKT57215.1| type 11 methyltransferase [Providencia burhodogranariea DSM 19968]
          Length = 253

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 5/119 (4%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK 160
           AL+ A   N    V+D+G G G  +      V +  VT  D S   LA        +E  
Sbjct: 33  ALQHALKGNLEAKVLDLGCGAGHASFMAASLVSS--VTAYDLSDSMLAVVASTAVERELN 90

Query: 161 IVE---GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
            +E   G AE LPF  +  D  +S  S  +W D  R +RE  RVLK GG+   I  V P
Sbjct: 91  NIETYKGAAESLPFENNSFDIVISRYSAHHWHDVGRALREVQRVLKPGGRGIFIDVVSP 149


>gi|167580194|ref|ZP_02373068.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
           thailandensis TXDOH]
          Length = 251

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +   A  V   D +P  LA    A ++  L   +I +G AE LP
Sbjct: 45  VLDLGCGAGHASFAAARG-GATEVIAYDLAPPMLATVEAAARERGLASVRIEQGAAERLP 103

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC---IIGPVYPTFWLSRYFADV 227
           F     D  VS  S  +W D  R + EA RVLK GG+A    I G  +P   +  +   V
Sbjct: 104 FADASFDWIVSRMSAHHWRDVPRALAEARRVLKPGGRALFVDIAGADHPL--VDTHLQTV 161

Query: 228 WMLFP-------KEEEYIEWFQKAGFKDVQLKRIGPKW 258
            +L         + +E++ +F +AGF    + R+  +W
Sbjct: 162 EVLRDASHVRDYRADEWLAFFARAGF----VARVRERW 195


>gi|392977709|ref|YP_006476297.1| type 11 methyltransferase [Enterobacter cloacae subsp. dissolvens
           SDM]
 gi|392323642|gb|AFM58595.1| methyltransferase type 11 [Enterobacter cloacae subsp. dissolvens
           SDM]
          Length = 257

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV    VT  D S   L   A+A + + L      +G AE LP
Sbjct: 49  VLDLGCGAGHASFTAAQHV--AQVTAYDLSSQMLEVVAEAAKAKGLNNVDTRQGYAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  + +RE  RVLK GG A I+  + P
Sbjct: 107 FEEASFDVVISRYSAHHWHDVGQALREVKRVLKPGGTAIIMDVMSP 152


>gi|222084646|ref|YP_002543175.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium radiobacter K84]
 gi|398382098|ref|ZP_10540196.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. AP16]
 gi|254789891|sp|B9J7S8.1|UBIE_AGRRK RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|221722094|gb|ACM25250.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Agrobacterium radiobacter K84]
 gi|397717966|gb|EJK78561.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. AP16]
          Length = 258

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  +   + T+LD +   L     +A +K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASNRLAHATVLDINGSMLGVGAERAAKKKLTDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF  +  D Y  A  I   P     ++EAYRVLK GG+  +          +  VY   
Sbjct: 134 LPFEPNSFDAYTIAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDLPLLDRVYEAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
                P F  +        +Y  +    FP ++++    ++AGF  V  
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQQDFATMIREAGFSRVNF 242


>gi|406922131|gb|EKD59746.1| Methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
           [uncultured bacterium]
          Length = 262

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +DVG G G  T  I        +  LD S  Q+A A+Q+          GDA++L FP  
Sbjct: 42  LDVGCGNGAFTEIIQARSAPARLAGLDASESQIAYARQRAGCNAAAFQVGDAQNLAFPDA 101

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----IGPVYPTFWLSRYFADVWML 230
             D  V A  I + PDP R + E  RV + GG        +    PTF L R  A +  +
Sbjct: 102 SFDVSVMALVIAFLPDPARAVAEMARVTRPGGTCASYMWDLPSGVPTFPLYRELAALGHV 161

Query: 231 FP--------KEEEYIEWFQKAGFKDVQLK 252
            P              + +Q AGF+ ++++
Sbjct: 162 APMPPNAKISSSAALQQLWQDAGFEAIEVQ 191


>gi|395792634|ref|ZP_10472058.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella vinsonii subsp. arupensis Pm136co]
 gi|423713296|ref|ZP_17687556.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella vinsonii subsp. arupensis OK-94-513]
 gi|395423337|gb|EJF89532.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella vinsonii subsp. arupensis OK-94-513]
 gi|395432191|gb|EJF98180.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella vinsonii subsp. arupensis Pm136co]
          Length = 260

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 76/185 (41%), Gaps = 35/185 (18%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAK---QKEPLK 157
           L P  +SN   L  DV GGTG     I+     K + TILD +   L+  K   QK  L 
Sbjct: 66  LSPPAISNWKFL--DVAGGTGDIAFRILNASRQKAHATILDINGSMLSVGKKRAQKNGLA 123

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------ 209
                VE +AE LPF     D Y  A  I   P   + +REA+RVLK GG+  C      
Sbjct: 124 PLIDFVEANAEYLPFEDQSFDAYTIAFGIRNVPHIDKALREAFRVLKPGGRFLCLEFSDV 183

Query: 210 ---IIGPVYPTFW-----------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDV 249
              ++  +Y  FW                   RY  +    FPK+ ++     +AGF  V
Sbjct: 184 EMPLLDKLY-DFWSFYAIPKIGQVIANDGDAYRYLVESIRKFPKQNDFAHMINQAGFSRV 242

Query: 250 QLKRI 254
             + +
Sbjct: 243 SYRNL 247


>gi|295106426|emb|CBL03969.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 153

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 23/147 (15%)

Query: 128 IVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187
           ++  +   ++T  D SP+ L  A+ +      ++V GDAE LPF     D      S  +
Sbjct: 10  VLGKIPGASLTCFDLSPNMLDAARARLG-GSAELVLGDAEGLPFQDCSFDAVWCNDSFHH 68

Query: 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK 247
           +PDP+R   +A+RVLK GG A ++G             DVW   P       W   +   
Sbjct: 69  YPDPERAAFQAWRVLKAGG-ALVVG-------------DVWQPAPARAVMNAWLPHSAEG 114

Query: 248 DV------QLKRIGPKWYRGV--RRHG 266
           DV      +++ I  KW+ GV  RR G
Sbjct: 115 DVRIYSEREMREILGKWFDGVSWRRVG 141


>gi|440784095|ref|ZP_20961516.1| sam-dependent methyltransferase UbiG [Clostridium pasteurianum DSM
           525]
 gi|440219131|gb|ELP58346.1| sam-dependent methyltransferase UbiG [Clostridium pasteurianum DSM
           525]
          Length = 208

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           +VI   ++ E ++   L  AD+ N+  +V D+G GTGF +L +    +AK V  +D S +
Sbjct: 15  NVIRSEYFEERLKYKVLSKADIKNK--IVADLGCGTGFISLELAN--EAKLVFSIDNSVN 70

Query: 146 QLAKAKQKEPLKECKIV---EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
            L + K+    K    V   +   ED+    +  D      ++ +  +  + I E  R+L
Sbjct: 71  MLKELKKSSINKNFNNVYPLKSSLEDITLFDESLDAIFINMALHHIRNADKAIGEMSRIL 130

Query: 203 KLGGKACIIGPV--YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253
           K GG   +I  V  +   W      D W+ F    +  EW  K+ FK++ ++ 
Sbjct: 131 KKGG-VIVISDVMEHNGEWAREEMFDEWLGFSN-SQISEWLIKSNFKNIHIEN 181


>gi|253574012|ref|ZP_04851354.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846489|gb|EES74495.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 255

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 10/153 (6%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAED 168
            M V++VG GTG T   + +      VT +DQS   L KA+ +   ++ +I  ++GD   
Sbjct: 35  GMRVLEVGCGTGRTACLLAQM--GAQVTAMDQSIVMLEKAEHRAQQQQLQIEWIQGDITA 92

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC--IIGPVYPTFWLSRYFAD 226
           +P  +D  D  ++     +  DP +  RE +RVL+ GG+A    +    P   L R   +
Sbjct: 93  IPLRSDTYDAVIAESVTVFAADPVKAFREYHRVLRKGGQAWDRELFRTQPHLALEREMRE 152

Query: 227 VWM--LFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
           ++     P    ++   + AGF+DV  ++ GP+
Sbjct: 153 LYGNPRLPDAAAWMRMLRDAGFQDV--RQWGPE 183


>gi|409096847|ref|ZP_11216871.1| SAM-dependent methyltransferase [Thermococcus zilligii AN1]
          Length = 209

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 159 CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF 218
            +++EG AE+LPF  +  D  +   +I +  DP++ +REAYRVLK GG A +IG V    
Sbjct: 77  IEVIEGVAENLPFSDESFDYLLMVTTICFVDDPEKALREAYRVLKPGG-ALVIGFVDGNS 135

Query: 219 WLSRYFAD-----VW---MLFPKEEEYIEWFQKAGFKDVQL 251
            + R++ +     V+     F   EE +E  +KAGFK+ ++
Sbjct: 136 PIGRHYEEHREESVFYRDARFFSTEELLELLKKAGFKEFEI 176


>gi|374328829|ref|YP_005079013.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Pseudovibrio sp. FO-BEG1]
 gi|359341617|gb|AEV34991.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Pseudovibrio sp. FO-BEG1]
          Length = 267

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 31/183 (16%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPL--- 156
           ++ P     R    +DV GGTG     +V+  +     T+ D +   L   K +      
Sbjct: 70  SMNPPKNGAREWRHLDVAGGTGDIATRVVERSNRTIKSTVCDINGSMLGVGKDRASAAGL 129

Query: 157 -KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---- 210
            +  + ++G+AE+LPFP  + D Y  A  I   P   + ++EA+RVLK GG+  C+    
Sbjct: 130 SENIEFIQGNAEELPFPDKHFDAYTIAFGIRNVPQIDKALKEAHRVLKRGGRFMCLEFSQ 189

Query: 211 -----IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                +  VY  F                    Y  +    FP +E + +  + AGF+ V
Sbjct: 190 VDVPALDKVYDLFSFHAIPKIGQAVTGDGDPYSYLVESIRKFPNQERFAQMIRDAGFERV 249

Query: 250 QLK 252
             +
Sbjct: 250 TYR 252


>gi|421588217|ref|ZP_16033530.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. Pop5]
 gi|403707107|gb|EJZ22203.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           sp. Pop5]
          Length = 258

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+  + + +  +LD +   LA    +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASNRQAHANVLDINGSMLAVGAERAEKKKLSSNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAASFDAYTIAFGIRNVPRIDVALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|455646777|gb|EMF25804.1| hypothetical protein H262_02490 [Citrobacter freundii GTC 09479]
          Length = 256

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV  K V   D S   L   AKA +   L      +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHV--KQVMAYDLSSQMLEVVAKAAKDRGLDNIATRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D  R +RE  RVLK GG   ++  + P
Sbjct: 106 FEDNVFDVVISRYSAHHWHDVGRALREVNRVLKPGGVLIVMDVMSP 151


>gi|255262593|ref|ZP_05341935.1| ubiquinone biosynthesis methyltransferase COQ5, precursor
           [Thalassiobium sp. R2A62]
 gi|255104928|gb|EET47602.1| ubiquinone biosynthesis methyltransferase COQ5, precursor
           [Thalassiobium sp. R2A62]
          Length = 250

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG  +   +    + + T+LD +   L + +++   ++       V GDA +L
Sbjct: 67  LLDVAGGTGDISFKFLGRAGSGHATVLDLTESMLVEGRKRAEAEQMSASLDWVTGDAMNL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PF  +  D Y  +  I     PQ  + EAYRVL+ GG+  ++
Sbjct: 127 PFEDNTFDVYTISFGIRNVTRPQEALSEAYRVLRPGGRLMVL 168


>gi|320529329|ref|ZP_08030418.1| methyltransferase domain protein, partial [Selenomonas artemidis
           F0399]
 gi|320138440|gb|EFW30333.1| methyltransferase domain protein [Selenomonas artemidis F0399]
          Length = 195

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 9/160 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL 169
           V+D+G G G T   + + V   ++  +D S   +  ++            +++ G  E L
Sbjct: 35  VLDIGCGGGNTLARMAERVTVGHLVGIDYSETSVEASRAFNSALAASGRMEVLLGSVEAL 94

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---RYFAD 226
           PF   + D+ V+  S  +WP+P   ++E  RV+K GG   ++  +Y    L    R   D
Sbjct: 95  PFSDAHFDKAVTVESFYFWPNPSESLKEVARVVKQGGTFLLLAEIYERPDLPDTIRAKVD 154

Query: 227 VWMLF-PKEEEYIEWFQKAGFKDVQLKRI-GPKWYRGVRR 264
            + L  P  EE+   F+ AGF  V+   + G  W   V R
Sbjct: 155 AYDLTNPTPEEFERLFRAAGFAQVETHFMDGEYWIAVVGR 194


>gi|298571344|gb|ADI87687.1| methyltransferase type 11 [uncultured Nitrospirae bacterium MY2-3C]
          Length = 215

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           VVDVG G GF +    + V     V  ++ +P  L KAK   ++  + + + ++G AE L
Sbjct: 93  VVDVGSGAGFDSFIAARLVGPTGKVVGVEMTPDMLNKAKSSAREAIMPQLEFIQGSAESL 152

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   ++AD  +S G +   PD     RE +RVL+ GG+  I
Sbjct: 153 PLADEWADVIISNGVVNLCPDKLAVFREMFRVLRPGGRLQI 193


>gi|227113589|ref|ZP_03827245.1| putative methyltransferase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 257

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    + V    V   D S   L   ++A  ++ L   ++ +G AE LP
Sbjct: 50  VIDLGCGAGHASFIAAQAV--AEVVSYDLSSQMLDVVSQAAAEKGLHNIRVQQGVAESLP 107

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + +RE  RVLK GG+A ++  V P    L  Y   V  
Sbjct: 108 FEDSSADIIISRYSAHHWHDVGQALREMRRVLKPGGRAIMMDVVSPGHPLLDSYLQTVEK 167

Query: 230 LFPKEE-------EYIEWFQKAGF 246
           L            E++  F  AGF
Sbjct: 168 LRDTSHVRNYAPGEWLSLFTDAGF 191


>gi|377820071|ref|YP_004976442.1| Methyltransferase [Burkholderia sp. YI23]
 gi|357934906|gb|AET88465.1| Methyltransferase [Burkholderia sp. YI23]
          Length = 254

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           N  V+D+G G G  +  +  HV  + V   D +P  LA    A +   L   +  +G AE
Sbjct: 43  NARVLDMGCGAGHASFAVAPHV--REVVAYDIAPPMLATVDAAAKDRGLATIRTQQGAAE 100

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK------ACIIGPVYPTFWLS 221
            LPF     D  VS  S  +W D    ++EA+RVLK GG+      A I  P+Y T   +
Sbjct: 101 KLPFDDASFDWAVSRMSAHHWRDVPAALKEAHRVLKPGGRLKFIDIAGIDDPLYDTHIQA 160

Query: 222 -RYFADVWMLFP-KEEEYIEWFQKAGFKDVQLKRIGPKW 258
                D   +   + +E+I     AGF      R+  +W
Sbjct: 161 IELLRDASHIRDYRADEWIAMLDAAGFD----ARVTERW 195


>gi|384086113|ref|ZP_09997288.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Acidithiobacillus thiooxidans ATCC 19377]
          Length = 261

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+D+ GGTG     I   +    ++ + D +P  LA    +   K  +   + VE +AE+
Sbjct: 76  VLDLAGGTGDLAAAIYPRIKPNGSIVVSDINPEMLAVGENRLADKGIIAGVEFVEANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           LPFP    D    A  I     P+R ++E +RVLK GG+A I+   +P
Sbjct: 136 LPFPDREFDLVTLAFGIRNMTHPERALKEIHRVLKTGGRALILEFSHP 183


>gi|357634331|ref|ZP_09132209.1| transcriptional regulator, ArsR family [Desulfovibrio sp. FW1012B]
 gi|357582885|gb|EHJ48218.1| transcriptional regulator, ArsR family [Desulfovibrio sp. FW1012B]
          Length = 307

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 4/141 (2%)

Query: 107 LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA 166
           +  R     D+G G G   L  V    A  V  +D SP  L+ A+++       +  G+ 
Sbjct: 146 MPERMARAADLGCGPG--DLLPVLCERAAAVIGVDSSPSMLSLAERRTAGLPVGVRMGEL 203

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-PVYPTFWLSRYFA 225
           E LP      D  V   ++ + PDP R + EA RVL   G+  +I    +    + R F 
Sbjct: 204 EHLPMADGEVDFAVICLTLHHLPDPARALAEARRVLAPSGRLVVIDFTAHENEAMRRRFG 263

Query: 226 DVWMLFPKEEEYIEWFQKAGF 246
           D W+ F + E+  EW  +AGF
Sbjct: 264 DRWLGFSR-EKLAEWLGRAGF 283


>gi|268609801|ref|ZP_06143528.1| putative methyltransferase type 11 [Ruminococcus flavefaciens FD-1]
          Length = 214

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D G GTG     + +    K+ T +D +P  +  AK+K+ LK  ++V GD E+LPF  
Sbjct: 51  LLDCGCGTGPMLTLLHQKYPEKHYTGIDLTPKMIEVAKRKK-LKGVELVVGDCENLPFAE 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           +  D  +   S  ++P+PQ      YRVL+ GG+
Sbjct: 110 NSFDVVICCESFHHYPNPQDFFGSVYRVLRPGGR 143


>gi|410096436|ref|ZP_11291423.1| hypothetical protein HMPREF1076_00601 [Parabacteroides goldsteinii
           CL02T12C30]
 gi|409226400|gb|EKN19309.1| hypothetical protein HMPREF1076_00601 [Parabacteroides goldsteinii
           CL02T12C30]
          Length = 269

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           V+D+G G G         V ++  V  +D +P  +AKA+    K      + +EGD E++
Sbjct: 80  VIDLGSGAGNDCFIARSEVGESGKVIGIDFAPQMIAKARANALKRGYTNIEFLEGDIENM 139

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P   + AD  VS   +   P      +E YRVLK GG  CI   V    +  + F D   
Sbjct: 140 PLRDNTADVIVSNCVLNLLPQKNIIFKEIYRVLKPGGHFCISDVVLNGIF-PKEFTDNAA 198

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKR 253
           ++        ++E+Y+   +K  F +++++R
Sbjct: 199 MYAGCIASAIQKEDYLAEIEKVNFTNIRVER 229


>gi|402703171|ref|ZP_10851150.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           helvetica C9P9]
          Length = 248

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 34/175 (19%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAK----NVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K V  +    ++T+ D +   L  AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKVRDRGNNISLTLSDINEEMLKNAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKACI--------- 210
                AE+LPF  +  D Y  A  I   PD  + ++EAYR+LK +G   C+         
Sbjct: 116 FTVASAEELPFSDNSFDYYTIAFGIRNVPDINKALKEAYRILKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
           +   Y  +  +                 Y  +   LFP ++E+    ++AGF++V
Sbjct: 176 LKDFYKFYSFNIIPSIGQMIVGNKEAYEYLVESIDLFPSQDEFRIMIKEAGFEEV 230


>gi|187479535|ref|YP_787560.1| methyltransferase [Bordetella avium 197N]
 gi|115424122|emb|CAJ50675.1| putative methyltransferase [Bordetella avium 197N]
          Length = 254

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 9/134 (6%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEP 155
           +D  E A  +  +  V+D+G G G  +  +     A  V   D S   L   A    +  
Sbjct: 31  EDLKEMASWARADARVLDLGCGGGHVSFHVAPR--AAEVVAYDLSQSMLDVVAAEAARRG 88

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           L   +  +G AE LPF     D  +S  S  +W DP +G+REA RVLK GG A     V 
Sbjct: 89  LNNLRTCQGKAERLPFADGEFDLVMSRFSTHHWEDPGQGLREACRVLKPGGIAVFADVVS 148

Query: 216 PTFWLSRYFADVWM 229
           P     +   D W+
Sbjct: 149 P----GQALLDTWI 158


>gi|47097727|ref|ZP_00235228.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254912489|ref|ZP_05262501.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes J2818]
 gi|254936816|ref|ZP_05268513.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes F6900]
 gi|386047583|ref|YP_005965915.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes J0161]
 gi|47013898|gb|EAL04930.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609411|gb|EEW22019.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes F6900]
 gi|293590471|gb|EFF98805.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes J2818]
 gi|345534574|gb|AEO04015.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes J0161]
          Length = 237

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + L   ++K     L   +++ G+A +L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKESDLHNVELIHGNAMEL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + PV+  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 170 FRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|110636413|ref|YP_676621.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Chelativorans sp. BNC1]
 gi|110287397|gb|ABG65456.1| demethylmenaquinone methyltransferase [Chelativorans sp. BNC1]
          Length = 277

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
            +DV GGTG     IV+    +  VT+LD +   LA    +A+++   +    VE +AE+
Sbjct: 93  ALDVAGGTGDIAFRIVEASGGQAQVTVLDINGSMLAVGRDRAEKRGLAQNLSFVEANAEE 152

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTF 218
           LPFP+   D Y  A  I   P   + + EA RVL+ GG+  C         ++  VY  +
Sbjct: 153 LPFPSSAFDAYTIAFGIRNVPQIDKALSEACRVLRPGGRFLCLEFSEVDVPLLDKVYEAW 212

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                RY  +    FP ++ +    ++AGF  V
Sbjct: 213 SFNAIPRIGQAVAGDGEPYRYLVESIRKFPNQDNFAVMIKRAGFDRV 259


>gi|418662119|ref|ZP_13223673.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-122]
 gi|375037064|gb|EHS30118.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-122]
          Length = 241

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|421845705|ref|ZP_16278858.1| hypothetical protein D186_11708 [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|411773240|gb|EKS56811.1| hypothetical protein D186_11708 [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
          Length = 256

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV  K V   D S   L   AKA +   L      +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHV--KQVMAYDLSSQMLEVVAKAAKDRGLDNIATRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D  R +RE  RVLK GG   ++  + P
Sbjct: 106 FEDNVFDVVISRYSAHHWHDVGRALREVNRVLKPGGVLIVMDVMSP 151


>gi|408788166|ref|ZP_11199887.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           lupini HPC(L)]
 gi|408485755|gb|EKJ94088.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           lupini HPC(L)]
          Length = 258

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     I++  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIIEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EA+RVLK GG+  +          +  VY  +
Sbjct: 134 LPFEANSFDAYTIAFGIRNVPRIDVALKEAHRVLKRGGRLLVLEFSEVEMPLLDRVYDAW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 194 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRTAGFSRV 240


>gi|402573134|ref|YP_006622477.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfosporosinus meridiei DSM 13257]
 gi|402254331|gb|AFQ44606.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfosporosinus meridiei DSM 13257]
          Length = 238

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 31/169 (18%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKA----KQKEPLKECKIVEGDA 166
           M ++DV  GTG  +  + + V +  NVT LD S   L  A    +Q       + ++G+A
Sbjct: 52  MNILDVCCGTGQLSFELGQAVGSDGNVTGLDFSQKMLEVAERSLQQTSNTAHIRFIQGNA 111

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT-------FW 219
            +LPFP +  D       +   PD ++G++E  R +K GGK   +    P+       +W
Sbjct: 112 MELPFPDNSFDGVTVGWGLRNLPDLRQGLKEMIRTVKPGGKVVSLDMAKPSLLGFKQAYW 171

Query: 220 L-------------------SRYFADVWMLFPKEEEYIEWFQKAGFKDV 249
           L                    +Y  D    FP +EE +  F + G KD 
Sbjct: 172 LYFEKLIPLMGKVWTRKASAYQYLHDSAREFPAQEELVRIFAECGLKDT 220


>gi|433650093|ref|YP_007295095.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium smegmatis JS623]
 gi|433299870|gb|AGB25690.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium smegmatis JS623]
          Length = 243

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 7/154 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           + +DVG G G  T  +     +  + + LD +   LA+A +         +  DA+ LP 
Sbjct: 88  VALDVGCGPGNVTASLADAAGSYGLALGLDIAEPMLARAVRAYSRPNVGFLRADAQRLPL 147

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY---FADVW 228
             D  D  +S   ++  PDP   + E  RVL+ GG+  ++ P+  +   SRY   F  V 
Sbjct: 148 RDDTVDAVLSIAVLQLVPDPASAVAEFGRVLRPGGRLALLVPI--SDHASRYSWLFPSVG 205

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
             F  ++E  +  +  GF  V  K +G  +W  G
Sbjct: 206 ARFFGDDELGDLLEDDGFLGVHTKTVGHLQWVHG 239


>gi|397779191|ref|YP_006543664.1| methyltransferase type 11 [Methanoculleus bourgensis MS2]
 gi|396937693|emb|CCJ34948.1| methyltransferase type 11 [Methanoculleus bourgensis MS2]
          Length = 212

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 5/102 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA----KQKEPLKECKIVEGDAEDLP 170
           +DVG G G   + + +  D   VT+LD SP  L  A    ++        ++ GD   +P
Sbjct: 46  LDVGSGPGSLGIALARASDLA-VTLLDSSPDMLETAEGNIREAGLSGRLSLLRGDVHAIP 104

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            P    D  VS GS+ +W D  R   E YRVL  GGK  + G
Sbjct: 105 LPAGSVDLVVSRGSVFFWEDLARAFSEIYRVLAPGGKTYVGG 146


>gi|335050031|ref|ZP_08543011.1| ubiquinone/menaquinone biosynthesis methyltransferase [Megasphaera
           sp. UPII 199-6]
 gi|333761663|gb|EGL39195.1| ubiquinone/menaquinone biosynthesis methyltransferase [Megasphaera
           sp. UPII 199-6]
          Length = 247

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           ++DV  GTG   +GI        V  LD SP  L +A++K   +K     +GDA  LPFP
Sbjct: 64  ILDVCCGTGDIAIGIADKRPQCRVWGLDFSPAMLQRAQEKSKGIKNVLWKKGDAVHLPFP 123

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-----WLSRYF 224
           T Y D  V +  +   PD  R ++E  RV+K GG    +    P       W S YF
Sbjct: 124 TAYFDSAVISFGLRNTPDYGRVLQEMSRVVKAGGTIWCLDSFLPESRWIRPWYSLYF 180


>gi|254995242|ref|ZP_05277432.1| ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
           [Anaplasma marginale str. Mississippi]
          Length = 247

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 30/180 (16%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKI 161
           + +++++  ++DV GGTG   +  +      +VT+ D +P  L   + +           
Sbjct: 39  SKIAHKSGTLLDVAGGTGDIAMRALARRSGLHVTVCDINPDMLGVGRDRAINSGYANISW 98

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI-IGPV----- 214
           V   AEDLPF ++  D Y  A  I   P+ ++ ++EA+RVLKL G+  C+   P+     
Sbjct: 99  VCASAEDLPFASNSFDYYTIAFGIRNIPNREKALQEAHRVLKLQGRFLCLEFSPIQKQGL 158

Query: 215 -------YPTFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                  Y  + +               Y  D    FP  EE+ +    AGF +V  + I
Sbjct: 159 FRTLYDLYSAYVIPNMGRCVAGNAEAYTYLTDSIRAFPPPEEFAQEIAGAGFFNVAHQNI 218


>gi|15924461|ref|NP_371995.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927052|ref|NP_374585.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus N315]
 gi|21283089|ref|NP_646177.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49486310|ref|YP_043531.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57650426|ref|YP_186355.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus COL]
 gi|148267955|ref|YP_001246898.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394019|ref|YP_001316694.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus JH1]
 gi|151221592|ref|YP_001332414.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156979790|ref|YP_001442049.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509638|ref|YP_001575297.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221140962|ref|ZP_03565455.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253315978|ref|ZP_04839191.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|253732113|ref|ZP_04866278.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253733282|ref|ZP_04867447.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006257|ref|ZP_05144858.2| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257795474|ref|ZP_05644453.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9781]
 gi|258413282|ref|ZP_05681558.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9763]
 gi|258420611|ref|ZP_05683553.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9719]
 gi|258426806|ref|ZP_05688026.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9299]
 gi|258444804|ref|ZP_05693133.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8115]
 gi|258447362|ref|ZP_05695506.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A6300]
 gi|258449753|ref|ZP_05697854.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A6224]
 gi|258451129|ref|ZP_05699164.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A5948]
 gi|258454577|ref|ZP_05702541.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A5937]
 gi|262048993|ref|ZP_06021872.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus D30]
 gi|262051640|ref|ZP_06023860.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus 930918-3]
 gi|269203096|ref|YP_003282365.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus ED98]
 gi|282892967|ref|ZP_06301202.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8117]
 gi|282921717|ref|ZP_06329434.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9765]
 gi|282927998|ref|ZP_06335607.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A10102]
 gi|284024469|ref|ZP_06378867.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 132]
 gi|294848434|ref|ZP_06789180.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9754]
 gi|295407220|ref|ZP_06817020.1| ubiE [Staphylococcus aureus A8819]
 gi|296275332|ref|ZP_06857839.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MR1]
 gi|297244644|ref|ZP_06928527.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8796]
 gi|300911955|ref|ZP_07129398.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380946|ref|ZP_07363605.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|379014680|ref|YP_005290916.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus VC40]
 gi|379021185|ref|YP_005297847.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus M013]
 gi|384547711|ref|YP_005736964.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus ED133]
 gi|384550232|ref|YP_005739484.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|384862072|ref|YP_005744792.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|384864694|ref|YP_005750053.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|384870012|ref|YP_005752726.1| Menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus T0131]
 gi|385781695|ref|YP_005757866.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|386729169|ref|YP_006195552.1| 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Staphylococcus
           aureus subsp. aureus 71193]
 gi|387143079|ref|YP_005731472.1| putative 2-heptaprenyl-1,4-naphthoquinonemethyltransferase
           [Staphylococcus aureus subsp. aureus TW20]
 gi|387150612|ref|YP_005742176.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus 04-02981]
 gi|387780570|ref|YP_005755368.1| putative 2-heptaprenyl-1, 4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus LGA251]
 gi|415687451|ref|ZP_11451326.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|415693536|ref|ZP_11455315.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|416841192|ref|ZP_11904254.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus O11]
 gi|416847523|ref|ZP_11907205.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus O46]
 gi|417650511|ref|ZP_12300281.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21189]
 gi|417651382|ref|ZP_12301145.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21172]
 gi|417654362|ref|ZP_12304085.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21193]
 gi|417797511|ref|ZP_12444707.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21305]
 gi|417800243|ref|ZP_12447367.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21310]
 gi|417800774|ref|ZP_12447882.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21318]
 gi|417893001|ref|ZP_12537038.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21201]
 gi|417897913|ref|ZP_12541839.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21259]
 gi|417901508|ref|ZP_12545384.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21266]
 gi|417905430|ref|ZP_12549241.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21269]
 gi|418277065|ref|ZP_12891746.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21178]
 gi|418284514|ref|ZP_12897234.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21209]
 gi|418310338|ref|ZP_12921883.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21331]
 gi|418311994|ref|ZP_12923507.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21334]
 gi|418316427|ref|ZP_12927865.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21340]
 gi|418318790|ref|ZP_12930183.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21232]
 gi|418321717|ref|ZP_12933056.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus VCU006]
 gi|418424617|ref|ZP_12997734.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS1]
 gi|418427612|ref|ZP_13000619.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS2]
 gi|418430446|ref|ZP_13003361.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS3a]
 gi|418433426|ref|ZP_13006188.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS4]
 gi|418437087|ref|ZP_13008886.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS5]
 gi|418439953|ref|ZP_13011658.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS6]
 gi|418443009|ref|ZP_13014609.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS7]
 gi|418446068|ref|ZP_13017544.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS8]
 gi|418449016|ref|ZP_13020404.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS9]
 gi|418451834|ref|ZP_13023168.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS10]
 gi|418454891|ref|ZP_13026151.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS11a]
 gi|418457765|ref|ZP_13028967.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS11b]
 gi|418562569|ref|ZP_13127026.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21262]
 gi|418568603|ref|ZP_13132948.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21272]
 gi|418572845|ref|ZP_13137047.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21333]
 gi|418579330|ref|ZP_13143425.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|418640407|ref|ZP_13202639.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-3]
 gi|418641973|ref|ZP_13204178.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-24]
 gi|418646887|ref|ZP_13208978.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-88]
 gi|418650586|ref|ZP_13212604.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-91]
 gi|418652942|ref|ZP_13214904.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-99]
 gi|418657632|ref|ZP_13219397.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-105]
 gi|418659739|ref|ZP_13221398.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-111]
 gi|418871266|ref|ZP_13425647.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-125]
 gi|418875410|ref|ZP_13429667.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|418878320|ref|ZP_13432555.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|418881151|ref|ZP_13435369.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|418884004|ref|ZP_13438197.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|418886734|ref|ZP_13440882.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|418895170|ref|ZP_13449265.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|418903711|ref|ZP_13457752.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|418906414|ref|ZP_13460440.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|418912081|ref|ZP_13466062.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|418914569|ref|ZP_13468541.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|418920551|ref|ZP_13474483.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|418925733|ref|ZP_13479635.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|418928755|ref|ZP_13482641.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|418931545|ref|ZP_13485386.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|418934378|ref|ZP_13488200.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|418947095|ref|ZP_13499485.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-157]
 gi|418949944|ref|ZP_13502161.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-160]
 gi|418955581|ref|ZP_13507518.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-189]
 gi|418978123|ref|ZP_13525924.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus DR10]
 gi|418988476|ref|ZP_13536148.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|418991333|ref|ZP_13538994.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|419786062|ref|ZP_14311803.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-M]
 gi|422743955|ref|ZP_16797933.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|422746307|ref|ZP_16800240.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|424773577|ref|ZP_18200634.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CM05]
 gi|424785307|ref|ZP_18212110.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus CN79]
 gi|440707355|ref|ZP_20888054.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21282]
 gi|440734921|ref|ZP_20914532.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus DSM 20231]
 gi|443637866|ref|ZP_21121932.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21236]
 gi|448741635|ref|ZP_21723596.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus KT/314250]
 gi|448742919|ref|ZP_21724833.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus KT/Y21]
 gi|54039802|sp|P67062.1|UBIE_STAAN RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|54039803|sp|P67063.1|UBIE_STAAW RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|54042287|sp|P67061.1|UBIE_STAAM RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|56749710|sp|Q6G992.1|UBIE_STAAS RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|81694470|sp|Q5HFV2.1|UBIE_STAAC RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|166234752|sp|A7X2H6.1|UBIE_STAA1 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|189037611|sp|A6U1T9.1|UBIE_STAA2 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|189037612|sp|A5ISZ9.1|UBIE_STAA9 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|189037613|sp|A8Z450.1|UBIE_STAAT RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|205829113|sp|A6QH20.1|UBIE_STAAE RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|13701270|dbj|BAB42564.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus N315]
 gi|14247242|dbj|BAB57633.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|21204529|dbj|BAB95225.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49244753|emb|CAG43189.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57284612|gb|AAW36706.1| methlytransferase, UbiE/COQ5 family [Staphylococcus aureus subsp.
           aureus COL]
 gi|147741024|gb|ABQ49322.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946471|gb|ABR52407.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus JH1]
 gi|150374392|dbj|BAF67652.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156721925|dbj|BAF78342.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|160368447|gb|ABX29418.1| possible 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253724160|gb|EES92889.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253728822|gb|EES97551.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789446|gb|EEV27786.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9781]
 gi|257839846|gb|EEV64314.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9763]
 gi|257843559|gb|EEV67966.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9719]
 gi|257849967|gb|EEV73925.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9299]
 gi|257850297|gb|EEV74250.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8115]
 gi|257853553|gb|EEV76512.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A6300]
 gi|257857001|gb|EEV79901.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A6224]
 gi|257861184|gb|EEV83997.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A5948]
 gi|257862960|gb|EEV85724.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A5937]
 gi|259160481|gb|EEW45505.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus 930918-3]
 gi|259162925|gb|EEW47488.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus D30]
 gi|262075386|gb|ACY11359.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus ED98]
 gi|269940962|emb|CBI49346.1| putative 2-heptaprenyl-1,4-naphthoquinonemethyltransferase
           [Staphylococcus aureus subsp. aureus TW20]
 gi|282590295|gb|EFB95375.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A10102]
 gi|282593979|gb|EFB98968.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9765]
 gi|282764964|gb|EFC05089.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8117]
 gi|285817151|gb|ADC37638.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus 04-02981]
 gi|294824460|gb|EFG40883.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9754]
 gi|294967933|gb|EFG43962.1| ubiE [Staphylococcus aureus A8819]
 gi|297178674|gb|EFH37920.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A8796]
 gi|298694760|gb|ADI97982.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300886201|gb|EFK81403.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333081|gb|ADL23274.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302751301|gb|ADL65478.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340532|gb|EFM06467.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312829861|emb|CBX34703.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315129186|gb|EFT85181.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|315197783|gb|EFU28117.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140358|gb|EFW32214.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142715|gb|EFW34518.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323439528|gb|EGA97249.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus O11]
 gi|323442233|gb|EGA99864.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus O46]
 gi|329314147|gb|AEB88560.1| Menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329723203|gb|EGG59734.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329727566|gb|EGG64022.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21172]
 gi|329731347|gb|EGG67713.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21193]
 gi|334267003|gb|EGL85473.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21305]
 gi|334271709|gb|EGL90092.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21310]
 gi|334277654|gb|EGL95878.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21318]
 gi|341843706|gb|EGS84928.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21269]
 gi|341845347|gb|EGS86549.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21266]
 gi|341849415|gb|EGS90558.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21259]
 gi|341856366|gb|EGS97205.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21201]
 gi|344177672|emb|CCC88150.1| putative 2-heptaprenyl-1, 4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus LGA251]
 gi|359830494|gb|AEV78472.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus M013]
 gi|364522684|gb|AEW65434.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|365173374|gb|EHM63942.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21209]
 gi|365173855|gb|EHM64289.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21178]
 gi|365224332|gb|EHM65597.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus VCU006]
 gi|365237078|gb|EHM77945.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21331]
 gi|365239116|gb|EHM79938.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21334]
 gi|365241111|gb|EHM81866.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21340]
 gi|365242132|gb|EHM82854.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21232]
 gi|371973673|gb|EHO91021.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21262]
 gi|371979431|gb|EHO96664.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21272]
 gi|371983777|gb|EHP00917.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21333]
 gi|374363377|gb|AEZ37482.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus VC40]
 gi|375014971|gb|EHS08642.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-3]
 gi|375018428|gb|EHS12008.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-24]
 gi|375020864|gb|EHS14375.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-99]
 gi|375027872|gb|EHS21230.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-91]
 gi|375030368|gb|EHS23686.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-105]
 gi|375031905|gb|EHS25166.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-88]
 gi|375034386|gb|EHS27550.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-111]
 gi|375368735|gb|EHS72643.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-125]
 gi|375370667|gb|EHS74465.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-189]
 gi|375376860|gb|EHS80369.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-157]
 gi|375378016|gb|EHS81442.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-160]
 gi|377694442|gb|EHT18807.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|377694976|gb|EHT19340.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|377697357|gb|EHT21712.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|377714339|gb|EHT38540.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|377714827|gb|EHT39026.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|377717569|gb|EHT41744.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|377722338|gb|EHT46464.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|377723455|gb|EHT47580.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|377725687|gb|EHT49800.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|377731341|gb|EHT55397.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|377738667|gb|EHT62676.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|377742726|gb|EHT66711.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|377744802|gb|EHT68779.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|377758071|gb|EHT81959.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|377763319|gb|EHT87175.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|377764277|gb|EHT88130.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|377769966|gb|EHT93732.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|377770472|gb|EHT94233.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|379993739|gb|EIA15184.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus DR10]
 gi|383361363|gb|EID38737.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-M]
 gi|384230462|gb|AFH69709.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus 71193]
 gi|387718165|gb|EIK06151.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS2]
 gi|387718415|gb|EIK06385.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS3a]
 gi|387719825|gb|EIK07756.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS1]
 gi|387725426|gb|EIK13042.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS4]
 gi|387727388|gb|EIK14904.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS5]
 gi|387730574|gb|EIK17952.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS6]
 gi|387735996|gb|EIK23106.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS8]
 gi|387737025|gb|EIK24106.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS7]
 gi|387737271|gb|EIK24345.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS9]
 gi|387744715|gb|EIK31479.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS10]
 gi|387745383|gb|EIK32141.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS11a]
 gi|387746970|gb|EIK33687.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus VRS11b]
 gi|402347216|gb|EJU82262.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus CM05]
 gi|408423612|emb|CCJ11023.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408425602|emb|CCJ12989.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408427590|emb|CCJ14953.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408429578|emb|CCJ26743.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408431565|emb|CCJ18880.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408433559|emb|CCJ20844.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408435551|emb|CCJ22811.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408437535|emb|CCJ24778.1| Demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus ST228]
 gi|421956717|gb|EKU09046.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus CN79]
 gi|436431016|gb|ELP28370.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus DSM 20231]
 gi|436506111|gb|ELP41950.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21282]
 gi|443404903|gb|ELS63520.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21236]
 gi|445547602|gb|ELY15867.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus KT/314250]
 gi|445563606|gb|ELY19763.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus KT/Y21]
          Length = 241

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|421150486|ref|ZP_15610142.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus str. Newbould 305]
 gi|394329876|gb|EJE55978.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus str. Newbould 305]
          Length = 241

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|334118612|ref|ZP_08492701.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Microcoleus vaginatus FGP-2]
 gi|333459619|gb|EGK88232.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Microcoleus vaginatus FGP-2]
          Length = 235

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKE-----PLKECKIVEGDAE 167
            +D+  G+G   L + K          +D SP QLA A +++     P+     VE DA 
Sbjct: 50  CLDLCCGSGDLALLLAKQAGPTGCVFGVDFSPEQLAVAARRDRPFLTPISPISWVEADAL 109

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227
           DLPFP +Y D       +    D  R ++E +RVLK G KA I+    P+  L R F   
Sbjct: 110 DLPFPDNYFDCATMGYGLRNVTDIPRSLQELHRVLKPGAKAAILDLHRPSNSLMRSFQQF 169

Query: 228 WM 229
           ++
Sbjct: 170 YL 171


>gi|451941345|ref|YP_007461982.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           vinsonii subsp. berkhoffii str. Winnie]
 gi|451900732|gb|AGF75194.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bartonella
           vinsonii subsp. berkhoffii str. Winnie]
          Length = 262

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 37/175 (21%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE------PLKECKIVEGDA 166
           V+DV GGTG     I+     K + T+LD +   L+  K++       PL     VE +A
Sbjct: 78  VLDVAGGTGDIAFRILNASRQKAHATVLDINGSMLSVGKKRAQKNGFAPL--INFVEANA 135

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYP 216
           E LPF     D Y  A  I   P   + +REA+RVLK GG+  C         ++  +Y 
Sbjct: 136 EHLPFEDQSFDAYTIAFGIRNVPHIDKALREAFRVLKPGGRFLCLEFSDVEMPLLDKLY- 194

Query: 217 TFW-----------------LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            FW                   RY  +    FPK+ ++     +AGF  V  + +
Sbjct: 195 DFWSFYAIPRIGQIIANDSDAYRYLVESIRKFPKQNDFAYMINQAGFSRVSYRNL 249


>gi|392409883|ref|YP_006446490.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfomonile tiedjei DSM 6799]
 gi|390623019|gb|AFM24226.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfomonile tiedjei DSM 6799]
          Length = 267

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVE---GDAEDL 169
           V+D+G G GF +    + V      I +D +P  LAKA++     E   +E   G+ E+L
Sbjct: 85  VLDLGSGAGFDSFLAARQVGKTGRVIGVDMTPEMLAKARELARGAEHSKIEFRLGEIENL 144

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           P      D  +S   I   PD QR  +EA+RVLK GG+   I  V  T  L     +   
Sbjct: 145 PIADSSVDVIISNCVINLSPDKQRVFQEAFRVLKPGGRLA-ISDVIATAPLPEAVRNDLS 203

Query: 230 LFP-------KEEEYIEWFQKAGFKDVQLKRIGPK 257
           L+          +E     +++GF+ +   RI PK
Sbjct: 204 LYSSCIGGAVSADELETMLRESGFESI---RIQPK 235


>gi|418645386|ref|ZP_13207511.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-55]
 gi|443638765|ref|ZP_21122798.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21196]
 gi|375023454|gb|EHS16910.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus IS-55]
 gi|443408599|gb|ELS67117.1| ribosomal RNA large subunit methyltransferase J-like protein
           [Staphylococcus aureus subsp. aureus 21196]
          Length = 241

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|86356011|ref|YP_467903.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           etli CFN 42]
 gi|123513261|sp|Q2KDB0.1|UBIE_RHIEC RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|86280113|gb|ABC89176.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Rhizobium etli CFN 42]
          Length = 258

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P   + + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAASFDAYTIAFGIRNVPRIDKALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|452965604|gb|EME70625.1| methylase [Magnetospirillum sp. SO-1]
          Length = 252

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           ++DVGGGTG    G  K      VT+ D +   L+    +A  +  L     V G+AEDL
Sbjct: 70  LLDVGGGTGDIAFGWKKR-GGGPVTVCDINREMLSVGRDRAVDRNLLNGLTWVCGNAEDL 128

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
           P P    DRY  A  +       R I EAYRVL+ GG+  C+         +   Y ++ 
Sbjct: 129 PIPDRSVDRYTIAFCLRNVTHWDRAIAEAYRVLRPGGRFMCLEFSRVIVPGLREAYDSYS 188

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +EE     + AGF  V+++ +
Sbjct: 189 FNVLPKVGGMVTGNAEAYQYLVESIRKFPPQEEMAAMVEAAGFARVEVRNL 239


>gi|430006218|emb|CCF22021.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Rhizobium sp.]
          Length = 258

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     I++    K + T+LD +   LA    +A++K        VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIIEASGRKAHATVLDINGSMLAVGAERAQKKGLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF  +  D Y  A  I   P     + EAYRVLK GG+  ++
Sbjct: 134 LPFQPNSFDAYTIAFGIRNVPHIDVALSEAYRVLKRGGRLLVL 176


>gi|54307337|ref|YP_128357.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Photobacterium profundum SS9]
 gi|46911757|emb|CAG18555.1| putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Photobacterium profundum SS9]
          Length = 230

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 31/169 (18%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEG 164
           R   V+D+GGGTG  T    + V  +   IL   + S  ++ ++K ++   +     V+ 
Sbjct: 42  RGNRVLDLGGGTGDLTAKFSRIVGGEGQVILADINNSMLKVGRSKLRDSGIVGNVGYVQA 101

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPV 214
           +AE+LPFP DY D    +  +    D ++ +R  YRVLK GG+  +          +  V
Sbjct: 102 NAEELPFPDDYFDCITISFCLRNVTDKEKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKV 161

Query: 215 YP--TFWL--------------SRYFADVWMLFPKEEEYIEWFQKAGFK 247
           Y   +F+L               RY A+   + P +E        AGF+
Sbjct: 162 YDAYSFYLLPKIGELIANDAESYRYLAESIRMHPNQETLKSMMDDAGFE 210


>gi|424909255|ref|ZP_18332632.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|392845286|gb|EJA97808.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
          Length = 258

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     I++  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIIEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EA+RVLK GG+  +          +  VY  +
Sbjct: 134 LPFEANSFDAYTIAFGIRNVPRIDVALKEAHRVLKRGGRLLVLEFSEVEMPLLDRVYDAW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 194 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRTAGFSRV 240


>gi|87161409|ref|YP_494057.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195204|ref|YP_500005.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|87127383|gb|ABD21897.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202762|gb|ABD30572.1| menaquinone biosynthesis methyltransferase, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
          Length = 200

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 13  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 72

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 73  DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 131

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 132 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 166


>gi|417897025|ref|ZP_12540968.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21235]
 gi|341840291|gb|EGS81811.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21235]
          Length = 241

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|258422498|ref|ZP_05685406.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9635]
 gi|282916737|ref|ZP_06324495.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus D139]
 gi|283770542|ref|ZP_06343434.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus H19]
 gi|417890046|ref|ZP_12534125.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21200]
 gi|418284154|ref|ZP_12896886.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21202]
 gi|418308019|ref|ZP_12919684.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21194]
 gi|418558921|ref|ZP_13123468.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21252]
 gi|418889288|ref|ZP_13443421.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1524]
 gi|418994140|ref|ZP_13541775.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|257847255|gb|EEV71261.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus A9635]
 gi|282319224|gb|EFB49576.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460689|gb|EFC07779.1| menaquinone biosynthesis methyltransferase ubiE [Staphylococcus
           aureus subsp. aureus H19]
 gi|341855739|gb|EGS96583.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21200]
 gi|365165018|gb|EHM56848.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21202]
 gi|365242351|gb|EHM83065.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21194]
 gi|371976271|gb|EHO93561.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus subsp. aureus 21252]
 gi|377743937|gb|EHT67915.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|377752796|gb|EHT76714.1| demethylmenaquinone methyltransferase [Staphylococcus aureus subsp.
           aureus CIG1524]
          Length = 241

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|183206714|gb|ACC54546.1| putative methyltransferase [Planktothrix agardhii NIVA-CYA 126/8]
          Length = 265

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 85  DHVINPGHWTEDMRDDALEPADLSNRNML--------VVDVGGGTGFTTLGIVKHVDAKN 136
           +   N G+W  D ++      +L  + +         ++DVG G G TT  ++ +  +  
Sbjct: 26  NEFFNVGYWQSDTQNQEESCFNLMEKLLEFIPEKQGNILDVGSGLGATTSYLLNYYSSAA 85

Query: 137 VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIR 196
           +  ++ SP Q+ ++    P  +CK +  DA ++ F  ++ D  +   S  Y+   ++ ++
Sbjct: 86  IVGINISPTQIERSILNAP--DCKFLLMDAVNIEFEDNFFDNIICVESAFYFNTREKFLK 143

Query: 197 EAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226
           EA+RVLK GG   +    + T   + Y  D
Sbjct: 144 EAWRVLKPGGNLVLSDMSFAT---TEYLGD 170


>gi|147677796|ref|YP_001212011.1| SAM-dependent methyltransferases [Pelotomaculum thermopropionicum
           SI]
 gi|146273893|dbj|BAF59642.1| SAM-dependent methyltransferases [Pelotomaculum thermopropionicum
           SI]
          Length = 244

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 50/192 (26%)

Query: 88  INPG---HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP 144
           ++PG   H  E M+   + P D+      V+DVG GTG T   + +   A +V  LD+S 
Sbjct: 16  LHPGGFSHTLETMKRLTISPDDV------VLDVGCGTGRTACYLARRFGA-HVFALDKSE 68

Query: 145 HQLAKAKQK--EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
             LAKA+ +  +   E   V GDA ++PF  + AD  V    + + P  +  ++E YRVL
Sbjct: 69  EMLAKARFRALQEGAEVHFVHGDALNMPFRDEVADLIVMESVLIFLP-VRDVLKECYRVL 127

Query: 203 KLGGKACIIGPVYPTFWLSRYFADVWML---------------------FPKEEEYIEWF 241
           K  G                   DV ML                      P   E++ +F
Sbjct: 128 KRNG----------------VLVDVEMLASESLHPGAREKLKAFCGLPQIPTLGEWVNFF 171

Query: 242 QKAGFKDVQLKR 253
            +AGF  V +K+
Sbjct: 172 NEAGFSQVFMKQ 183


>gi|421859184|ref|ZP_16291423.1| methylase [Paenibacillus popilliae ATCC 14706]
 gi|410831249|dbj|GAC41860.1| methylase [Paenibacillus popilliae ATCC 14706]
          Length = 245

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 38/187 (20%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EP 155
           MR   ++P + +      +D+  GT   T+ + +      +  LD SP  L+  ++K E 
Sbjct: 47  MRRMNVQPGETA------LDLCCGTCDWTIQLAQASRTGQMIGLDFSPKMLSVGRRKIEK 100

Query: 156 L---KECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII 211
           L   ++ ++VEG+A DLPFP D  D YV+ G  +   PD  + IRE +RV+K GG+   +
Sbjct: 101 LGLQEQIRLVEGNAMDLPFPDDSFD-YVTIGFGLRNVPDYDQVIREMHRVVKPGGRVVCL 159

Query: 212 GPVYPTF--------------------WLS-RYFADVWM-----LFPKEEEYIEWFQKAG 245
               PT+                    W++ RY    W+      FP  EE  + F+ AG
Sbjct: 160 ELSKPTWQPFKGLYYFYFQRLLPILGKWIAKRYEQYKWLPESLASFPGHEELADMFRAAG 219

Query: 246 FKDVQLK 252
            + V+ K
Sbjct: 220 LEQVEAK 226


>gi|410464942|ref|ZP_11318323.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfovibrio magneticus str. Maddingley MBC34]
 gi|409981939|gb|EKO38447.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfovibrio magneticus str. Maddingley MBC34]
          Length = 218

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAED 168
           + V+DVG G G  +L + +H  A  V  +D +P  +A A+QK   EP   C   + DA D
Sbjct: 50  LRVLDVGCGPGSLSLRLARHCQA--VWGVDVTPEMIAVAEQKLAAEPANAC-FQQADACD 106

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           LPF     D  VS  +++    P + + E  RVL+ GG+  +I   Y
Sbjct: 107 LPFDDHSFDAVVSVNALQAMDQPDKALGEMRRVLRPGGELLLIAYCY 153


>gi|406945459|gb|EKD76940.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [uncultured bacterium]
          Length = 257

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 31/170 (18%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTIL-DQSPHQLAKAKQ----KEPLKECKIVEGDAE 167
           +V+D+ GGTG  T  I + + A    IL D +   L+  +     K           DAE
Sbjct: 72  VVLDIAGGTGDLTAKISEKIGANGRVILSDINSSMLSIGRDRMIDKGLFDNITYALADAE 131

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----------GPVYPT 217
            LPF  +  DR +    +    D +  +R  YRVLK GG+A I+           P+Y  
Sbjct: 132 KLPFADNAFDRVIIGFGLRNVTDKEAALRSMYRVLKPGGRAVIVEFSKPIMPGLKPIYDA 191

Query: 218 F------WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
           +      WL           RY A+   + P ++      Q AGF++  +
Sbjct: 192 YSFKLLPWLGKTVLNDADSYRYLAESIRMHPDQKALQNRMQNAGFENCDV 241


>gi|300088509|ref|YP_003759031.1| methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528242|gb|ADJ26710.1| Methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 274

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 33/197 (16%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           V+D+G G GF      + V  A  V  +D +P  L++A+    +      +  +G+ EDL
Sbjct: 77  VLDLGSGAGFDAFLAARQVGPAGKVIGVDMTPDMLSRARDNAARSGFTNVEFRQGEIEDL 136

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-------PVYPTFWLSR 222
           P  +   D  +S   I   PD      EA+RVLK GG+  +         P Y    ++ 
Sbjct: 137 PVASGTIDTVISNCVINLSPDKPAVFAEAFRVLKPGGRLAVSDIVLTEPLPDYVRDSMAA 196

Query: 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLK----------RIGPKWYRGVRRHGL----- 267
           Y A V     K EEY+   + AGF+ ++++           + P+  +     GL     
Sbjct: 197 YTACVAGAVLK-EEYLGAMKDAGFEKIEVRGESVFDLDFIDMAPELMKSAASPGLTEEKI 255

Query: 268 ------IMGCSVTGVKP 278
                 I+   VT VKP
Sbjct: 256 QDISETIVSVKVTAVKP 272


>gi|452965885|gb|EME70902.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Magnetospirillum sp. SO-1]
          Length = 243

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 77/193 (39%), Gaps = 38/193 (19%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           L+VD+ GGTG   +  +     + V + D SP  +A  +++      + +EG AE +PF 
Sbjct: 64  LIVDLAGGTG--DVARLLAAPDRRVIVCDPSPEMMAVGERRCRGLGIQFLEGKAEAMPFE 121

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG-KAC--------IIGPVYPTF----- 218
           T   D    A  +     P+  + E +RVLK GG   C        +I P Y  +     
Sbjct: 122 TGSVDTLTIAFGLRNATSPEAALAEIFRVLKPGGWFVCLEFSRPWALIRPFYDAYSFHVI 181

Query: 219 -----WLSR------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGL 267
                W++R      Y  +    FP + E       AGF  V           G R    
Sbjct: 182 PRLGAWIAREPAAYAYLVESIRRFPDQREMAGLMTAAGFGRV-----------GWRNLSA 230

Query: 268 IMGCSVTGVKPAS 280
            + C  +GVKPAS
Sbjct: 231 GIACLHSGVKPAS 243


>gi|268575384|ref|XP_002642671.1| C. briggsae CBR-COQ-5 protein [Caenorhabditis briggsae]
          Length = 281

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 31/170 (18%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE------CKIVEG 164
           N  ++D+ GGTG     +++H     VT+ D +   L   K++   +        K +  
Sbjct: 92  NAKILDMAGGTGDIAFRLLRHSPTAKVTVSDINQPMLDVGKERAETERDINPSRLKWICA 151

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPVY 215
           +AE +PF ++  D +  +  I     PQ+ I EA+R+LK GG+  I         + P+Y
Sbjct: 152 NAEQMPFESNTYDLFTMSFGIRNCTHPQKVIAEAFRILKPGGQLAILEFSQVNAALKPIY 211

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +  +                +Y  +    FP ++E+    ++ GF+ V
Sbjct: 212 DAYSFNVIPVLGEILASDRQSYQYLVESIRKFPNQDEFARIIREEGFERV 261


>gi|386831022|ref|YP_006237676.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus HO 5096 0412]
 gi|385196414|emb|CCG16042.1| putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Staphylococcus aureus subsp. aureus HO 5096 0412]
          Length = 241

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|304311980|ref|YP_003811578.1| Ubiquinone/menaquinone biosynthesis methyltransferase [gamma
           proteobacterium HdN1]
 gi|301797713|emb|CBL45935.1| Ubiquinone/menaquinone biosynthesis methyltransferase [gamma
           proteobacterium HdN1]
          Length = 268

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 12/123 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLK----------ECKIV 162
           ++D+GGGTG   L   K V ++  V ++D S   L  A+++   K              +
Sbjct: 78  ILDLGGGTGDLALRAAKRVGSEGKVVLVDLSREMLQIAQERASQKANGRFQEWVDNIDFI 137

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLS 221
           + +AE LPFP D+ D  +++ ++     PQ  +  A+RVLK GG+  ++    P   WL 
Sbjct: 138 QANAESLPFPDDHFDTCITSFALRVTEHPQAVLESAFRVLKPGGRLLVLEFSQPEREWLG 197

Query: 222 RYF 224
            ++
Sbjct: 198 TFY 200


>gi|290968405|ref|ZP_06559945.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290781592|gb|EFD94180.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 237

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           ++DV  GTG   +GI        V  LD SP  L +A++K   +K     +GDA  LPFP
Sbjct: 54  ILDVCCGTGDIAIGIADKRPQCRVWGLDFSPAMLQRAQEKSKGIKNVLWKKGDAVHLPFP 113

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-----WLSRYF 224
           T Y D  V +  +   PD  R ++E  RV+K GG    +    P       W S YF
Sbjct: 114 TAYFDSAVISFGLRNTPDYGRVLQEMSRVVKAGGTIWCLDSFLPESRWIRPWYSLYF 170


>gi|451854749|gb|EMD68041.1| hypothetical protein COCSADRAFT_108064 [Cochliobolus sativus
           ND90Pr]
          Length = 333

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 46/204 (22%)

Query: 85  DHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN----- 136
           DH +   NPG     +   +  P+D    N+L  D+ GGTG     ++ H    N     
Sbjct: 103 DHFVRNLNPGR--NPLISSSSGPSDQQGMNIL--DIAGGTGDIAFRMLDHASHINHDAHT 158

Query: 137 -VTILDQSPHQLAKAKQKE---PLKEC---KIVEGDAEDLPF-PTDYADRYVSAGSIEYW 188
            VT+ D +P  LA+ K++    P         VE +AEDL   P++  D Y  A  I  +
Sbjct: 159 RVTVADINPDMLAEGKKRSLQTPYARSPRLTFVEANAEDLHMVPSESVDLYTVAFGIRNF 218

Query: 189 PDPQRGIREAYRVLKLGGK-AC-----IIGPVYPTFWLS--------------------R 222
              +  ++EAYRVLK GG  AC     +  P++   +                      +
Sbjct: 219 THKEVALKEAYRVLKPGGVFACLEFSKVQNPLFDAVYQRWSFGAIPLIGQLVAGDRDSYQ 278

Query: 223 YFADVWMLFPKEEEYIEWFQKAGF 246
           Y  +    FP +EE+    ++AGF
Sbjct: 279 YLVESIARFPSQEEFSGMIREAGF 302


>gi|346326113|gb|EGX95709.1| ubiquinone biosynthesis methyltransferase coq5 [Cordyceps militaris
           CM01]
          Length = 308

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 40/177 (22%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE---PLKE-- 158
           R   V+DV GGTG     IV+H  ++N      VT+ D +P  L   +Q+    P     
Sbjct: 107 RPQRVLDVAGGTGDIAFRIVEHAHSQNANPNIHVTVSDINPAMLDVGRQRSLRLPASHQA 166

Query: 159 -CKIVEGDAEDLP--FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC----- 209
               +E +AE +P   P    D Y  A  I  + D    +REAYRVLK GG  AC     
Sbjct: 167 ALSFLEANAERIPANVPDASLDLYTVAFGIRNFTDISAALREAYRVLKPGGVFACMEFSK 226

Query: 210 ----IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
               ++   Y  +  S                +Y  +    FP +EE+ +  + AGF
Sbjct: 227 VGNPLLNAAYKQWSFSAIPLIGQLVAADRDSYQYLVESIERFPSQEEFRDMIKDAGF 283


>gi|74318776|ref|YP_316516.1| demethylmenaquinone methyltransferase [Thiobacillus denitrificans
           ATCC 25259]
 gi|74058271|gb|AAZ98711.1| methyltransferase [Thiobacillus denitrificans ATCC 25259]
          Length = 256

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 98  RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPL 156
           R  AL+ A L+   M VVDVG GTG      VK V DA  V  +D S   +A A     L
Sbjct: 59  RGQALQRAGLAP-GMRVVDVGVGTGLVAREAVKRVGDAALVVGVDPSLGMMAAAD----L 113

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
              ++VEG AE +PFP D +  ++S G ++ +  D      E +RVL+ GG+ C++    
Sbjct: 114 PGVRLVEGRAESIPFP-DASFDFLSMGYALRHIGDLSAAFAEFHRVLRPGGRLCLLEITK 172

Query: 216 PTFWLSRYFADVWM 229
           P    SR     +M
Sbjct: 173 PERAWSRALLKAYM 186


>gi|226229259|ref|YP_002763365.1| ArsR family transcriptional regulator [Gemmatimonas aurantiaca
           T-27]
 gi|226092450|dbj|BAH40895.1| ArsR family transcriptional regulator [Gemmatimonas aurantiaca
           T-27]
          Length = 310

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 10/169 (5%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
            ++V D+G GTG  +  +  HV A+   I        A A +  P     + EG  E LP
Sbjct: 141 TLIVGDLGCGTGALSAALAPHV-AQVHAIDASPAMLAAAAARLAPFAHVTVTEGALEALP 199

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY---FADV 227
              D  D  V    + +  DP R +RE +RVL+  G+  ++          RY      V
Sbjct: 200 LDDDALDVAVLMLVLHHVSDPLRALREVHRVLRPAGRVLLVD--MQPHADERYRDTMGHV 257

Query: 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGV 276
           W+ FP  +   EW ++AGF +V   RI P           +  C+ T V
Sbjct: 258 WLGFPA-DTLTEWLREAGFANV---RITPLPLDSAASGPALFACTATAV 302


>gi|217963917|ref|YP_002349595.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes HCC23]
 gi|290892091|ref|ZP_06555087.1| menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes FSL J2-071]
 gi|386008703|ref|YP_005926981.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes L99]
 gi|386027311|ref|YP_005948087.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes M7]
 gi|404408376|ref|YP_006691091.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2376]
 gi|254789942|sp|B8DBZ5.1|UBIE_LISMH RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|217333187|gb|ACK38981.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes HCC23]
 gi|290558214|gb|EFD91732.1| menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes FSL J2-071]
 gi|307571513|emb|CAR84692.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes L99]
 gi|336023892|gb|AEH93029.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes M7]
 gi|404242525|emb|CBY63925.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2376]
          Length = 237

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + L   ++K     L   +++ G+A +L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVTEADLHNVELIHGNAMEL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + PV+  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 170 FRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|325915294|ref|ZP_08177614.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538487|gb|EGD10163.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 261

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGD 165
           +RN  ++D+G G G  +  +   +    V   D S   L   A       L + + +EG 
Sbjct: 50  HRNGRLLDLGCGAGHVSFQLAPLM--AEVVAYDLSADMLDVVAATAASRGLNQIRTLEGV 107

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYF 224
           AE LPF T   D  VS  S  +W D  + +RE  RVL+ GG A  I  V P    L  + 
Sbjct: 108 AEHLPFETGSIDVVVSRYSAHHWRDLGQALREVQRVLRPGGLAAFIDVVAPGLPLLDTHL 167

Query: 225 ADVWML----FPKEEEYIEWFQKAGFKDVQLKR 253
             + +L      ++    +W Q  G   + ++R
Sbjct: 168 QAIELLRDTSHVRDYSVAQWLQVVGDAGLHVQR 200


>gi|218533093|ref|YP_002423909.1| type 11 methyltransferase [Methylobacterium extorquens CM4]
 gi|218525396|gb|ACK85981.1| Methyltransferase type 11 [Methylobacterium extorquens CM4]
          Length = 259

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 13/151 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  T  +   V  ++VT LD S   L   A   Q+  L      +   E LP
Sbjct: 48  VLDLGCGGGHVTYAVAPQV--RSVTALDLSQSMLDAVAAEAQRRGLANVATRQASVEALP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F     D  VS  S  +W D    +REA+RVL  GG+  ++  V+P   L       W L
Sbjct: 106 FADASFDGVVSRYSAHHWGDVSAALREAHRVLAPGGRFGLVDVVHPGPPLLDTHLQAWEL 165

Query: 231 FPK--------EEEYIEWFQKAGFKDVQLKR 253
                      E E+     +AGF    ++R
Sbjct: 166 LRDPSHVRDYGEAEWRRMLAEAGFVPGAVRR 196


>gi|384134499|ref|YP_005517213.1| type 11 methyltransferase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
 gi|339288584|gb|AEJ42694.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
          Length = 195

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           VVD+G G GF  L + +      V  +D SP  LA    +A+Q   L   +++E  A+ L
Sbjct: 39  VVDIGAGPGFFALPLARRTQG-TVYAVDLSPEMLAMLSERARQAG-LDHVQVLEATADQL 96

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           P P +   R + A  +   PD    +RE YRVL+ GG+  ++
Sbjct: 97  PLPDESVHRALMAFVLHEVPDQAAALREVYRVLRPGGRFLLL 138


>gi|417885035|ref|ZP_12529196.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus oris F0423]
 gi|341596991|gb|EGS39577.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus oris F0423]
          Length = 236

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-----LDQSPHQLAKAKQKEPLKECKIVE 163
           N  M  +D+  GTG  T+ + + V     TI      D   H  AK ++    K+ ++++
Sbjct: 49  NAGMDCLDLCCGTGDLTIALARQVGPSGRTIGLDFNQDMLAHAEAKVRKAGLGKDIELIQ 108

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI-----IGPVYPT 217
            DA  LPFPT   D       +   PD  + + EAYRVLK GG+ AC+       PV   
Sbjct: 109 ADAMALPFPTGAFDVVTIGFGLRNVPDANQVLAEAYRVLKPGGQFACLEMSQPTNPVVKA 168

Query: 218 FWLSRY--FADVWMLFPKEEEYIEWFQ 242
            W + +  F  +  LF  +    ++ Q
Sbjct: 169 GWRAYFHVFPHLAQLFGGKAADYQYLQ 195


>gi|116873373|ref|YP_850154.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|123466477|sp|A0AK43.1|UBIE_LISW6 RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|116742251|emb|CAK21375.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 236

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + L   ++K     L   +++ G+A +L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVELIHGNAMEL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + PV+  F+   Y    W+      FP   +  E FQ AGF  V+
Sbjct: 170 FRYVMPVFGKFFAKSYKEYSWLQESTREFPGMSKLAEMFQDAGFSYVR 217


>gi|357055468|ref|ZP_09116536.1| hypothetical protein HMPREF9467_03508 [Clostridium clostridioforme
           2_1_49FAA]
 gi|355382587|gb|EHG29684.1| hypothetical protein HMPREF9467_03508 [Clostridium clostridioforme
           2_1_49FAA]
          Length = 212

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ----KEPLKECKIVEGDAED 168
           ++ D G G G  T  ++K      VT LD S     K KQ    +     C +V+GD   
Sbjct: 51  MLADFGCGGGRNTAELLKRFPEARVTALDYSKVACDKTKQFNRNEVQAGRCNVVQGDVSR 110

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           LPF     D   +  ++ +WP P    +E +RVLK GG   I+
Sbjct: 111 LPFEAATFDVITAFETVYFWPGPVESFQEVWRVLKPGGTFMIV 153


>gi|283834504|ref|ZP_06354245.1| methyltransferase, UbiE/COQ5 family [Citrobacter youngae ATCC
           29220]
 gi|291070054|gb|EFE08163.1| methyltransferase, UbiE/COQ5 family [Citrobacter youngae ATCC
           29220]
          Length = 256

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV+   V   D S   L   AKA +++ L      +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHVN--QVVAYDLSSQMLEVVAKAAKEKELDNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D  R +RE  R+LK GG   ++  + P
Sbjct: 106 FEDNAFDVVISRYSAHHWHDVGRALREVNRILKPGGVLIVMDVMSP 151


>gi|255514259|gb|EET90520.1| ubiquinone/menaquinone biosynthesis methyltransferase [Candidatus
           Micrarchaeum acidiphilum ARMAN-2]
          Length = 231

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 83  VYDHVINPG---HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK---- 135
           + +H+ + G    W      +A+ P       M V+DV  GTG   + I K    +    
Sbjct: 18  LMNHLFSLGIDKSWRSAAAAEAVSP----GATMSVLDVATGTGDLAIAISKLAAKRRASV 73

Query: 136 NVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ 192
           ++T +D +   L  AK K     +   K  EGDA  + + ++  D  VSA ++  + D  
Sbjct: 74  SITAMDFNKDMLGVAKTKASRLGINAIKFEEGDALSMKYESNSFDVLVSAFALRNFDDLA 133

Query: 193 RGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
           +   EA RVLK GG+A ++    P   L R+F
Sbjct: 134 KFSSEALRVLKPGGRAVLVDMALPDSRLGRHF 165


>gi|13541861|ref|NP_111549.1| ubiquinone/menaquinone biosynthesis methylase [Thermoplasma
           volcanium GSS1]
 gi|14325297|dbj|BAB60201.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 223

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +D G G+G  T  I++  D+ +VT LD +          E  K CK V   AE LPF  +
Sbjct: 51  LDCGAGSGKVTELIMESCDSCSVTALDITDSMF----NPELTKRCKFVVSPAESLPFSDE 106

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGG---KACIIGPVYPTF--WLSRYF 224
             DR  SA       D  +   E YRVLK GG      I  P  P F  + S YF
Sbjct: 107 TFDRVSSAFLTRNLADVDKYFSEVYRVLKPGGIFVNLDIFNPTKPVFSQFFSLYF 161


>gi|443327518|ref|ZP_21056141.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
 gi|442792853|gb|ELS02317.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
          Length = 274

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 8/150 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           ++D+G GTG +TL + +      V  LD SP  L  A+ K    +  I   +G AE   F
Sbjct: 103 ILDLGCGTGSSTLMLKQAFPEAEVVGLDLSPQMLLMAEHKGSKNKLAIKWQQGLAEATSF 162

Query: 172 PTDYADRYVSAGSIEYWP--DPQRGIREAYRVLKLGGKACIIG----PVYPTFWLSRYFA 225
           P +  D    A      P    Q  +RE  R+L LGG+  I+      +  T WL R F 
Sbjct: 163 PDENFDLISVAFLFHETPVHISQAILRECLRLLTLGGQIVILDGNQQRLRHTNWLIRLFH 222

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
           + +      E    W Q  G+K+V+   IG
Sbjct: 223 EPYSQAYAAENIDNWMQSLGYKEVETNYIG 252


>gi|254505008|ref|ZP_05117159.1| ubiquinone/menaquinone biosynthesis methyltransferases subfamily
           [Labrenzia alexandrii DFL-11]
 gi|222441079|gb|EEE47758.1| ubiquinone/menaquinone biosynthesis methyltransferases subfamily
           [Labrenzia alexandrii DFL-11]
          Length = 270

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 31/182 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIV-KHVDAKNVTILDQSPHQLAKAK---QKEPLK 157
           L P   S     ++DV GGTG  +  +V K   +    + D +   L   +   +K  L 
Sbjct: 74  LAPPKSSASGWRLLDVAGGTGDVSTRVVEKSQRSVKAVVCDINNSMLNVGRDRAEKAGLS 133

Query: 158 EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI----- 210
           +     +G+AEDLPFP    D Y  A  I   PD  + +REA RVLK GG+  C+     
Sbjct: 134 DLITFSQGNAEDLPFPDKSFDAYTIAFGIRNVPDIPKALREANRVLKRGGRFMCLEFSEV 193

Query: 211 ----IGPVYPTF----------WLS------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
               +  VY  F          W++      +Y  +    FP +E + E  ++AG   V 
Sbjct: 194 DVPGLDKVYDAFSFNAIPAMGKWVTGDGEPYQYLVESIRKFPSQERFAEMIREAGLARVT 253

Query: 251 LK 252
            +
Sbjct: 254 YR 255


>gi|448565135|ref|ZP_21636106.1| methyl transferase-like protein [Haloferax prahovense DSM 18310]
 gi|445715794|gb|ELZ67547.1| methyl transferase-like protein [Haloferax prahovense DSM 18310]
          Length = 213

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 27/195 (13%)

Query: 69  HKKEAFWFYRFLSIVYDHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           H      F+   + VYD V+   +PG         AL+ AD       VVD+GGG+G  T
Sbjct: 22  HGAGDVRFFDRFAPVYDLVMPPADPGALGT-----ALDRADRPVER--VVDIGGGSGRAT 74

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           L +    D     +LD+S   L +A+++        V GDA  LPF  D  D      + 
Sbjct: 75  LAL----DVPERVVLDRSAGMLRRARERG----LDCVRGDARGLPFAADSLDAVTVVDAF 126

Query: 186 EYWPDPQRGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYI 238
            + P+ QRG+  E +RVL  GG    +    P   L R       +      F   +E +
Sbjct: 127 HHMPN-QRGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFATPDELV 184

Query: 239 EWFQKAGFKDVQLKR 253
            + ++ GF+   ++R
Sbjct: 185 RFLERVGFEADVVER 199


>gi|347522097|ref|YP_004779668.1| methyltransferase [Lactococcus garvieae ATCC 49156]
 gi|385833482|ref|YP_005871257.1| methlytransferase [Lactococcus garvieae Lg2]
 gi|343180665|dbj|BAK59004.1| methlytransferase [Lactococcus garvieae ATCC 49156]
 gi|343182635|dbj|BAK60973.1| methlytransferase [Lactococcus garvieae Lg2]
          Length = 243

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 16/162 (9%)

Query: 98  RDDALEP-ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEP 155
           RD  ++   DLS+  M ++D+  GTG  T  + K V  K   + LD S + L  A+ K  
Sbjct: 36  RDKTMKKMGDLSD--MTILDLCCGTGDWTFDLSKAVGQKGKVVGLDFSENMLKVAQDKLD 93

Query: 156 LK---ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            K     + ++G+A  +PF  D  D       +   PD    +RE +RVLK GGK   I 
Sbjct: 94  EKGNRNIEFIQGNAMAIPFENDMFDAVTIGYGLRNTPDYLTVLREIFRVLKTGGKVVCIE 153

Query: 213 PVYPTFWLSR-----YFADVW----MLFPKEEEYIEWFQKAG 245
             +PT  + +     YF  V      +F K  +  +W QK+ 
Sbjct: 154 TSHPTLPIYKQAFELYFKKVMPFLGKVFAKSLKEYQWLQKSA 195


>gi|16801111|ref|NP_471379.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           innocua Clip11262]
 gi|16803970|ref|NP_465455.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes EGD-e]
 gi|46908164|ref|YP_014553.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47094454|ref|ZP_00232134.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes str. 4b H7858]
 gi|226224535|ref|YP_002758642.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|254825574|ref|ZP_05230575.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL J1-194]
 gi|254827184|ref|ZP_05231871.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL N3-165]
 gi|254852834|ref|ZP_05242182.1| menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes FSL R2-503]
 gi|254931898|ref|ZP_05265257.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes HPB2262]
 gi|254993470|ref|ZP_05275660.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL J2-064]
 gi|255521039|ref|ZP_05388276.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL J1-175]
 gi|284802376|ref|YP_003414241.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 08-5578]
 gi|284995518|ref|YP_003417286.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 08-5923]
 gi|300763759|ref|ZP_07073756.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes FSL N1-017]
 gi|386044239|ref|YP_005963044.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes 10403S]
 gi|386050907|ref|YP_005968898.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL R2-561]
 gi|386054186|ref|YP_005971744.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes Finland 1998]
 gi|386732672|ref|YP_006206168.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 07PF0776]
 gi|404281543|ref|YP_006682441.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2755]
 gi|404284427|ref|YP_006685324.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2372]
 gi|404287359|ref|YP_006693945.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes serotype 7 str. SLCC2482]
 gi|404411232|ref|YP_006696820.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC5850]
 gi|404414009|ref|YP_006699596.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC7179]
 gi|405750284|ref|YP_006673750.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes ATCC 19117]
 gi|405753158|ref|YP_006676623.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2378]
 gi|405758981|ref|YP_006688257.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2479]
 gi|406704716|ref|YP_006755070.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes L312]
 gi|417315576|ref|ZP_12102252.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes J1816]
 gi|417318013|ref|ZP_12104611.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes J1-220]
 gi|422413475|ref|ZP_16490434.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua FSL S4-378]
 gi|423098837|ref|ZP_17086545.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua ATCC 33091]
 gi|424714806|ref|YP_007015521.1| Demethylmenaquinone methyltransferase [Listeria monocytogenes
           serotype 4b str. LL195]
 gi|424823691|ref|ZP_18248704.1| Menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes str. Scott A]
 gi|54039801|sp|P67056.1|UBIE_LISIN RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|54042286|sp|P67055.1|UBIE_LISMO RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|56749762|sp|Q71Y84.1|UBIE_LISMF RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|259550966|sp|C1KWN1.1|UBIE_LISMC RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|16411384|emb|CAD00009.1| menH [Listeria monocytogenes EGD-e]
 gi|16414546|emb|CAC97275.1| menH [Listeria innocua Clip11262]
 gi|46881434|gb|AAT04730.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47017169|gb|EAL08022.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes str. 4b H7858]
 gi|225876997|emb|CAS05706.1| Putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258599567|gb|EEW12892.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL N3-165]
 gi|258606163|gb|EEW18771.1| menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes FSL R2-503]
 gi|284057938|gb|ADB68879.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 08-5578]
 gi|284060985|gb|ADB71924.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 08-5923]
 gi|293583450|gb|EFF95482.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes HPB2262]
 gi|293594817|gb|EFG02578.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL J1-194]
 gi|300515495|gb|EFK42545.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes FSL N1-017]
 gi|313618147|gb|EFR90239.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua FSL S4-378]
 gi|328466280|gb|EGF37437.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes J1816]
 gi|328472774|gb|EGF43623.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes J1-220]
 gi|332312371|gb|EGJ25466.1| Menaquinone biosynthesis methyltransferase ubiE [Listeria
           monocytogenes str. Scott A]
 gi|345537473|gb|AEO06913.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes 10403S]
 gi|346424753|gb|AEO26278.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes FSL R2-561]
 gi|346646837|gb|AEO39462.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes Finland 1998]
 gi|370794664|gb|EHN62427.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           innocua ATCC 33091]
 gi|384391430|gb|AFH80500.1| ubiquinone/menaquinone biosynthesis methyltransferase [Listeria
           monocytogenes 07PF0776]
 gi|404219484|emb|CBY70848.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes ATCC 19117]
 gi|404222358|emb|CBY73721.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2378]
 gi|404228178|emb|CBY49583.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2755]
 gi|404231058|emb|CBY52462.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC5850]
 gi|404233929|emb|CBY55332.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2372]
 gi|404236863|emb|CBY58265.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC2479]
 gi|404239708|emb|CBY61109.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes SLCC7179]
 gi|404246288|emb|CBY04513.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes serotype 7 str. SLCC2482]
 gi|406361746|emb|CBY68019.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Listeria
           monocytogenes L312]
 gi|424013990|emb|CCO64530.1| Demethylmenaquinone methyltransferase [Listeria monocytogenes
           serotype 4b str. LL195]
 gi|441471710|emb|CCQ21465.1| Demethylmenaquinone methyltransferase [Listeria monocytogenes]
 gi|441474842|emb|CCQ24596.1| Demethylmenaquinone methyltransferase [Listeria monocytogenes
           N53-1]
          Length = 237

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDL 169
           V+DV  GT   ++ + + +  + +VT LD S + L   ++K     L   +++ G+A +L
Sbjct: 51  VLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVELIHGNAMEL 110

Query: 170 PFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI----------------- 210
           PFP +  D YV+ G  +   PD  + +RE YRVLK GG+ ACI                 
Sbjct: 111 PFPDNSFD-YVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAY 169

Query: 211 ---IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQ 250
              + PV+  F+   Y    W+      FP      E FQ+AGF  V+
Sbjct: 170 FRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVR 217


>gi|239832686|ref|ZP_04681015.1| ubiquinone/menaquinone biosynthesis methyltransferase [Ochrobactrum
           intermedium LMG 3301]
 gi|444311439|ref|ZP_21147048.1| ubiquinone/menaquinone biosynthesis methyltransferase [Ochrobactrum
           intermedium M86]
 gi|239824953|gb|EEQ96521.1| ubiquinone/menaquinone biosynthesis methyltransferase [Ochrobactrum
           intermedium LMG 3301]
 gi|443485231|gb|ELT48024.1| ubiquinone/menaquinone biosynthesis methyltransferase [Ochrobactrum
           intermedium M86]
          Length = 263

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 31/171 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLK----ECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L   +++   K      + VE +AE+L
Sbjct: 80  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLADNLEFVEANAEEL 139

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAYRVLK GG+  C         ++  +Y  + 
Sbjct: 140 PFQDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKIYDQWS 199

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                              Y  +    FPK++++    +KAGF+ V  +  
Sbjct: 200 FHAIPRIGKMITGDGDSYSYLVESIRKFPKQQDFALMIEKAGFERVSYRNF 250


>gi|182415843|ref|YP_001820909.1| ArsR family transcriptional regulator [Opitutus terrae PB90-1]
 gi|177843057|gb|ACB77309.1| transcriptional regulator, ArsR family [Opitutus terrae PB90-1]
          Length = 312

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 7/148 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           + D+G G G   L  +    A+ V  +D SP  +       +K  L       GD E +P
Sbjct: 150 IADLGAGEGL--LSQLLAARARQVWCIDNSPRMVEVGTTLARKNNLANLSYKLGDIEHVP 207

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFADVWM 229
                 D  + + ++ +   PQ  + EA+R+L+ GG+  ++      F  +R  +ADVW+
Sbjct: 208 LGDRSVDLAILSQALHHAQHPQTAVNEAFRILRPGGQLLVLDLNEHHFEKARELYADVWL 267

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRIGPK 257
            F KE     + +KAGF  V++  +  +
Sbjct: 268 GF-KESALHGFLKKAGFTKVEVTAVAKE 294


>gi|420143069|ref|ZP_14650573.1| Demethylmenaquinone methyltransferase (Menaquinone biosynthesis
           methyltransferase ubiE) [Lactococcus garvieae IPLA
           31405]
 gi|391857015|gb|EIT67548.1| Demethylmenaquinone methyltransferase (Menaquinone biosynthesis
           methyltransferase ubiE) [Lactococcus garvieae IPLA
           31405]
          Length = 243

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 16/162 (9%)

Query: 98  RDDALEP-ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEP 155
           RD  ++   DLS+  M ++D+  GTG  T  + K V  K   + LD S + L  A+ K  
Sbjct: 36  RDKTMKKMGDLSD--MTILDLCCGTGDWTFDLSKAVGQKGKVVGLDFSENMLKVAQDKLD 93

Query: 156 LK---ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            K     + ++G+A  +PF  D  D       +   PD    +RE +RVLK GGK   I 
Sbjct: 94  KKGNENIEFIQGNAMAIPFENDMFDAVTIGYGLRNTPDYLTVLREIFRVLKTGGKVVCIE 153

Query: 213 PVYPTFWLSR-----YFADVW----MLFPKEEEYIEWFQKAG 245
             +PT  + +     YF  V      +F K  +  +W QK+ 
Sbjct: 154 TSHPTLPIYKQAFELYFKKVMPFLGKVFAKSLKEYQWLQKSA 195


>gi|408376908|ref|ZP_11174511.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium albertimagni AOL15]
 gi|407748867|gb|EKF60380.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium albertimagni AOL15]
          Length = 258

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 33/182 (18%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEP 155
           AL P    ++N  V+DV GGTG     IV+  +   + T+LD +   L     +A++K  
Sbjct: 63  ALNPR--KDQNYKVLDVAGGTGDIAFRIVEASNRMAHATVLDINGSMLGVGAERAEKKGL 120

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----- 210
                 VE +AE LPF  +  D Y  A  I   P     + EA+RVLK GG+  +     
Sbjct: 121 SPNLTFVEANAESLPFEDNSFDAYTIAFGIRNVPHIDVALSEAFRVLKRGGRLLVLEFSE 180

Query: 211 -----IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                +  VY  +  +                +Y  +    FP + ++    ++AGF +V
Sbjct: 181 VELPLLDKVYDAWSFNAIPRFGKMITGDAEPYQYLVESIRKFPNQPDFARMIERAGFSNV 240

Query: 250 QL 251
           + 
Sbjct: 241 RF 242


>gi|418296858|ref|ZP_12908701.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium tumefaciens CCNWGS0286]
 gi|355539033|gb|EHH08275.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Agrobacterium tumefaciens CCNWGS0286]
          Length = 258

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           ++DV GGTG     I++  +   + T+LD +   LA    +A +K+       VE +AE+
Sbjct: 74  ILDVAGGTGDIAFRIIEASNRLAHATVLDINGSMLAVGEERAAKKKLSDNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPF  +  D Y  A  I   P     ++EA+RVLK GG+  +          +  VY  +
Sbjct: 134 LPFEANSFDAYTIAFGIRNVPRIDVALKEAHRVLKRGGRLLVLEFSEVDMPLLDRVYDAW 193

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
             +                +Y  +    FP +E++    + AGF  V
Sbjct: 194 SFNAIPQFGKMITGDAEPYQYLVESIRKFPNQEDFATMIRTAGFSRV 240


>gi|334141329|ref|YP_004534535.1| type 11 methyltransferase [Novosphingobium sp. PP1Y]
 gi|333939359|emb|CCA92717.1| methyltransferase type 11 [Novosphingobium sp. PP1Y]
          Length = 229

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 13/144 (9%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPH---QLAKAKQKEPLKECKIVEGDAEDLPF 171
           +D+G G G  +  +  HV  + V   D S     Q+A+  ++  L   +     AEDLPF
Sbjct: 25  LDLGAGGGHLSYAVAPHV--REVAACDLSAQMIEQIAREAEQRNLPTIRTQVAAAEDLPF 82

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             D  D      S  +W D  +GIREA RVL  G  A     V P   L+  F     L 
Sbjct: 83  ADDSFDFLACRFSTHHWHDAVQGIREARRVLSPGAVAVFSDVVAPALPLADTFLQAVELL 142

Query: 232 P-----KEEEYIEW---FQKAGFK 247
                 ++   ++W    + AGF+
Sbjct: 143 RDLSHVRDYTALQWTAMLEGAGFR 166


>gi|325678116|ref|ZP_08157749.1| methyltransferase domain protein [Ruminococcus albus 8]
 gi|324110187|gb|EGC04370.1| methyltransferase domain protein [Ruminococcus albus 8]
          Length = 198

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 114 VVDVGGGTGFT---TLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V D+G G G+     LG+ +      + I D+S  +  K  + E  K  KI++G AE+LP
Sbjct: 45  VADLGCGGGYNIRRMLGLSEKAKFIGLDISDESVKKAEKVNKNELGKRVKIIKGSAENLP 104

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           F  +  D   +  ++ +W  P+   RE YR L  GG   +I
Sbjct: 105 FTDNSIDLITAFETVFFWKKPEIAFREIYRSLVNGGCFAVI 145


>gi|86139423|ref|ZP_01057992.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseobacter sp. MED193]
 gi|85823926|gb|EAQ44132.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseobacter sp. MED193]
          Length = 250

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKEC-KIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   E + E    V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLKRAGHGHSTVLDLTTPMLEEGRKRAEAEQMAESLDWVTGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII----------GPVYPTFW 219
           PF  +  D Y  +  I     PQ  + EAYRVLK GG+  ++            +Y  + 
Sbjct: 127 PFKDNTFDVYTISFGIRNVTRPQEALNEAYRVLKPGGRLMVLEFSQLPNDGMQKLYDLYS 186

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP ++ ++E  + AGF + + + +
Sbjct: 187 FNVIPRMGKLIANDYDSYQYLVESIRNFPDQDTFLEMVKTAGFANAKYRNL 237


>gi|156744336|ref|YP_001434465.1| type 11 methyltransferase [Roseiflexus castenholzii DSM 13941]
 gi|156235664|gb|ABU60447.1| Methyltransferase type 11 [Roseiflexus castenholzii DSM 13941]
          Length = 295

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 7/129 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDLP 170
           V+DVG G G T   + +  D   +  L+  P Q+ +A+     +   +V+   GDA  LP
Sbjct: 79  VLDVGCGLGGTLALLNESFDQVELLGLNIDPSQIEQARYIACARPGNLVDFSIGDAMRLP 138

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           +  +  D  ++     ++P+ +R +REAYRVL+ GG+  +   V PT WL R    +WML
Sbjct: 139 YADESFDTVLAVECSFHFPNRERFLREAYRVLRPGGRLALSDFV-PT-WLMR--TALWML 194

Query: 231 FPKEEEYIE 239
               E  IE
Sbjct: 195 GGSIERIIE 203


>gi|310642565|ref|YP_003947323.1| menaquinone biosynthesis methyltransferase ubie [Paenibacillus
           polymyxa SC2]
 gi|386041630|ref|YP_005960584.1| 2-heptaprenyl-1,4-naphthoquinonemethyltransferase [Paenibacillus
           polymyxa M1]
 gi|309247515|gb|ADO57082.1| Menaquinone biosynthesis methyltransferase ubiE [Paenibacillus
           polymyxa SC2]
 gi|343097668|emb|CCC85877.1| 2-heptaprenyl-1,4-naphthoquinonemethyltransferase [Paenibacillus
           polymyxa M1]
          Length = 242

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 30/172 (17%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK----EPLKECKIVEG 164
           +R    +D+  GT   TL + +  ++ ++  LD S + L   ++K       K+ K+V+G
Sbjct: 50  HRGDTAIDLCCGTCDWTLAMARASESGHIVGLDFSQNMLNVGERKITSESREKQIKLVQG 109

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI------------- 210
           +A DLPF  +  D       +   PD +R ++E  RV+K GG+  C+             
Sbjct: 110 NAMDLPFEDNSFDYATIGFGLRNVPDLRRVLQEMQRVVKPGGQVVCLELSKPTWQPFKGI 169

Query: 211 -------IGPVYPTFWLSRYFADVWM-----LFPKEEEYIEWFQKAGFKDVQ 250
                  I P+    +  RY    W+     LFP  +E  + F++ G KDVQ
Sbjct: 170 YYAYFQHILPMLGKLFAKRYEQYKWLPDSLALFPGRDELADIFREVGLKDVQ 221


>gi|254477625|ref|ZP_05091011.1| ubiquinone biosynthesis methyltransferase COQ5 [Ruegeria sp. R11]
 gi|214031868|gb|EEB72703.1| ubiquinone biosynthesis methyltransferase COQ5 [Ruegeria sp. R11]
          Length = 250

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   ++       V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLKRAGHGHSTVLDLTAPMLEEGRKRAEAEQMADSLNWVTGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------------------ 211
           PF  +  D Y  +  I     PQ  + EAYRVLK GG+  ++                  
Sbjct: 127 PFKDNTFDVYTISFGIRNVTRPQEALNEAYRVLKPGGRLMVLEFSQLPNPAMQKAYDLYS 186

Query: 212 -------GPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                  G V    + S +Y  +    FP ++ ++   ++AGF + + + +
Sbjct: 187 FNVIPRMGQVIADDYDSYQYLVESIRNFPDQDTFLSMLKQAGFANAKYRNL 237


>gi|115400457|ref|XP_001215817.1| ubiquinone biosynthesis methyltransferase coq5 [Aspergillus terreus
           NIH2624]
 gi|114191483|gb|EAU33183.1| ubiquinone biosynthesis methyltransferase coq5 [Aspergillus terreus
           NIH2624]
          Length = 313

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 39/181 (21%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE---- 154
           +D + R   ++D+ GGTG     ++ H    N      VTI D +P  LA+ K++     
Sbjct: 108 SDTTGRGWNILDIAGGTGDIAFRMLDHATNINNDLETRVTISDINPDMLAEGKKRSIQTP 167

Query: 155 --PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC- 209
                    +E +A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC 
Sbjct: 168 YYNTPRLSFMEANAQHMPAIPDNSVDLYTVVFGIRNFTDKQAALEEAFRVLKPGGVFACM 227

Query: 210 --------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAG 245
                   +   VY  +  S                +Y  +    FP +EE+     KAG
Sbjct: 228 EFSKVDNSLFDAVYKQWSFSAIPLIGQLVAGDRDSYQYLVESIDKFPSQEEFRAMIHKAG 287

Query: 246 F 246
           F
Sbjct: 288 F 288


>gi|443328260|ref|ZP_21056860.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
 gi|442792106|gb|ELS01593.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Xenococcus sp. PCC 7305]
          Length = 249

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 17/139 (12%)

Query: 93  WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152
           + + +RD  L+P       M V+DVG GTG +T  +        V  LD SP  L  A+Q
Sbjct: 57  YRQALRDLELQPG------MKVLDVGCGTGESTRFLTNSYPDIEVEGLDLSPGMLEVARQ 110

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            + +      EGD  ++  P    D  ++A +   +PD Q  + E  RVL+ GG+  I+ 
Sbjct: 111 LDSV--SGYFEGDVCNIERPDATYDLVITAFTFRNFPDKQTSLAEMIRVLRPGGRLLILD 168

Query: 213 PVYP---------TFWLSR 222
              P         TFW+S+
Sbjct: 169 HFQPQKILWKQTYTFWMSQ 187


>gi|358052406|ref|ZP_09146289.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus simiae CCM 7213]
 gi|357258101|gb|EHJ08275.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus simiae CCM 7213]
          Length = 241

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GT   T+ + K V     VT LD S + LA  K+K   ++  K+V GDA DLPF 
Sbjct: 54  LDVCCGTADWTIALSKAVGPFGEVTGLDFSENMLAVGKEKTADMENVKLVHGDAMDLPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFAD 226
            +  D YV+ G  +   P+    ++E  RVLK GG    +    PT  + +     YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPEYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQVYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K ++  EW Q++ F      QLKR+
Sbjct: 173 VMPVFGKLFAKSKDEYEWLQQSTFNFPGKEQLKRM 207


>gi|50954064|ref|YP_061352.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leifsonia
           xyli subsp. xyli str. CTCB07]
 gi|50950546|gb|AAT88247.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leifsonia
           xyli subsp. xyli str. CTCB07]
          Length = 365

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFP 172
           ++D+  GTG ++  + ++     V   D SP  +   ++++         + DA DLPFP
Sbjct: 56  ILDIAAGTGTSSASLARN--GARVVAADFSPGMIEVGRRRQSGNPFVTFQQADATDLPFP 113

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---------- 222
            D  D    A  +    +P+R + E YRV K GG+  I    +P   L R          
Sbjct: 114 DDTFDAVTIAFGLRNIVEPRRALAEFYRVTKPGGRVVICEFSHPPVALIRSGYNVYLRWG 173

Query: 223 ----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                           Y  D    +P++ E   W ++AG++DV  + +
Sbjct: 174 MPVLARAASSNPAAYEYLMDSIQAWPEQPELAAWLREAGYQDVAWRNL 221


>gi|82751068|ref|YP_416809.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus aureus RF122]
 gi|123549226|sp|Q2YY85.1|UBIE_STAAB RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|82656599|emb|CAI81022.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus
           RF122]
          Length = 241

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFG 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPAFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|255020031|ref|ZP_05292104.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Acidithiobacillus caldus ATCC 51756]
 gi|340783420|ref|YP_004750027.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Acidithiobacillus caldus SM-1]
 gi|254970560|gb|EET28049.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Acidithiobacillus caldus ATCC 51756]
 gi|340557571|gb|AEK59325.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Acidithiobacillus caldus SM-1]
          Length = 264

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+D+ GGTG     + + V     + + D +P  LA    +   K  L   + VE +AE+
Sbjct: 79  VLDLAGGTGDLAALMYRRVQPHGRIVVSDINPDMLAVGEKRLADKGMLAGVEFVEANAEE 138

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           LPFP    D    A  I     P+R +RE +RVLK GG+  ++   +P
Sbjct: 139 LPFPDRSFDLVTLAFGIRNMTHPERALREIHRVLKTGGRVLVLEFSHP 186


>gi|386775150|ref|ZP_10097528.1| ubiquinone/menaquinone biosynthesis methylase [Brachybacterium
           paraconglomeratum LC44]
          Length = 277

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           ++DVG G G  T  + + V   NVT L+ +    A  + +   + L E  +V GDA+ L 
Sbjct: 49  LLDVGSGAGTITADLARIVGPGNVTALEVAEESAALTRAELAAQGLDEVTVVVGDAQALD 108

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-----------W 219
            P D  D   +   +++ P P   +REA RV + GG   +    Y  F           W
Sbjct: 109 LPDDAFDVVHAHQVLQHLPRPVDALREARRVTRPGGLVAVRDSDYEGFRWFPEDARLDRW 168

Query: 220 LSRYFADVWMLFPKEE---EYIEWFQKAGFKDV 249
           L+ Y A         +     + W  +AGF DV
Sbjct: 169 LTLYLAAARANGGTPDAGRRLLAWAHEAGFTDV 201


>gi|304438663|ref|ZP_07398601.1| UbiE/COQ5 methyltransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368312|gb|EFM21999.1| UbiE/COQ5 methyltransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 223

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 11/155 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ-KEPLKE---CKIVEGDAEDL 169
           V+D+G G G T   + + V   ++  +D +   +  ++     L E    +I+ G  E L
Sbjct: 63  VLDIGCGGGNTLARMAERVTEGHLVGIDYAETSVEASRAFNAALVERGRVEILHGSVEAL 122

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV-----YPTFWLSRYF 224
           PF   + D  V+  S  +WP P+  +RE  RV++ GG   ++  +      P    ++  
Sbjct: 123 PFADGHFDAVVTVESFYFWPTPEESLREVARVVREGGSFLLLAEICGRDDLPESTRAK-V 181

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQLK-RIGPKW 258
           A+  +  P   E+   F+ AGF++VQ+  + G  W
Sbjct: 182 AEYQLTNPTPAEFEHLFRTAGFREVQIHLKEGEYW 216


>gi|293401226|ref|ZP_06645370.1| methyltransferase, UbiE/COQ5 family [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|317502250|ref|ZP_07960423.1| UbiE/COQ5 family methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|336440292|ref|ZP_08619884.1| hypothetical protein HMPREF0990_02278 [Lachnospiraceae bacterium
           1_1_57FAA]
 gi|373452852|ref|ZP_09544761.1| hypothetical protein HMPREF0984_01803 [Eubacterium sp. 3_1_31]
 gi|291305352|gb|EFE46597.1| methyltransferase, UbiE/COQ5 family [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|316896365|gb|EFV18463.1| UbiE/COQ5 family methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|336013573|gb|EGN43450.1| hypothetical protein HMPREF0990_02278 [Lachnospiraceae bacterium
           1_1_57FAA]
 gi|371965049|gb|EHO82551.1| hypothetical protein HMPREF0984_01803 [Eubacterium sp. 3_1_31]
          Length = 203

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           H++N GH    M +      ++ + N + +D+G G G     +++      V  +D S  
Sbjct: 20  HMMNTGH--SSMAEWGFTHMEIQSDN-VCLDIGCGGGANVRKLLEKSPYGRVVGIDHSEI 76

Query: 146 QLAKAKQKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRV 201
            + K+K+        K C+I++GD   LPF  +  D   +  +I +WPD     ++ Y++
Sbjct: 77  SVEKSKKINKAGIESKRCEILQGDVMKLPFRGETFDVITAFETIYFWPDISEAFKKVYKI 136

Query: 202 LKLGG 206
           LK+GG
Sbjct: 137 LKIGG 141


>gi|384491467|gb|EIE82663.1| hypothetical protein RO3G_07368 [Rhizopus delemar RA 99-880]
          Length = 295

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 39/175 (22%)

Query: 114 VVDVGGGTGFTTLGIVK-----HVDAK-NVTILDQSPHQLAKAKQK------EPLKECKI 161
           ++DV GGTG   L  +      H D+  +VT++D +PH L + +++         K+   
Sbjct: 101 LLDVAGGTGDIALRFLDYCKNVHQDSTASVTLVDINPHMLGEGEKRFKTTPYAHTKQASF 160

Query: 162 VEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------I 210
           +  +AE+L   P +  D Y  A  I       + ++EAYRVLK GG+  C         +
Sbjct: 161 LVQNAENLTDIPDESVDVYTIAFGIRNCTHVDKVVKEAYRVLKKGGRFMCLEFSKVDNPV 220

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
           IG +Y  +                   +Y  +    FP +EE+ +  + AGFK V
Sbjct: 221 IGKIYDIYSFDVIPALGQIIASDRDSYQYLVESIRKFPPQEEFAQIIRDAGFKTV 275


>gi|308482000|ref|XP_003103204.1| CRE-COQ-5 protein [Caenorhabditis remanei]
 gi|308260309|gb|EFP04262.1| CRE-COQ-5 protein [Caenorhabditis remanei]
          Length = 285

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 31/175 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL----AKAKQKEPLKECKI--VEG 164
           N  ++D+ GGTG     +++      VT+ D +   L     +A+++  ++  ++  V  
Sbjct: 96  NAKILDMAGGTGDIAFRLLRESPTATVTVSDINQPMLDVGKERAEKERDIQPSRLEWVCA 155

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPVY 215
           +AE++PF ++  D +  +  I     P++ IREA+RVLK GG+  I         + P+Y
Sbjct: 156 NAEEMPFESNTYDLFTMSFGIRNCTHPEKVIREAFRVLKPGGQLAILEFSAVNAALKPIY 215

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             +  +                +Y  +    FP ++E+    ++ GF  V+ + +
Sbjct: 216 DAYSFNVIPVLGEILASDRASYQYLVESIRKFPNQDEFARIIREEGFGHVRYENM 270


>gi|452821899|gb|EME28924.1| phosphatidylethanolamine n-methyltransferase, putative [Galdieria
           sulphuraria]
          Length = 331

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 18/150 (12%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-C---KIVEGDAED 168
           ++VD+  GTG+ T  + K      +  +D S   L +A ++  L+E C    ++  + + 
Sbjct: 170 VLVDLSCGTGYVTRRLAKTRKYSRIVGIDLSESMLKEAYRRMLLEEGCDPFTLIRANVDS 229

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA--- 225
           LP   +  D      ++  WP  Q G+ E YR+LK          V+ T ++S Y     
Sbjct: 230 LPLRDNVVDLIYCGAALHCWPKVQDGLAEMYRILKPDAL------VFATTFISNYSPLIS 283

Query: 226 --DVWMLFPKEEEYIEWFQKA-GFKDVQLK 252
             + +  F K+E  +EW  K+ GF+ VQ++
Sbjct: 284 RWNAYRFFTKKE--LEWLLKSRGFRQVQVQ 311


>gi|297207870|ref|ZP_06924303.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|296887444|gb|EFH26344.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus aureus subsp. aureus ATCC 51811]
          Length = 241

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + K V     VT +D S + L   K+K   ++  K+V GDA +LPF 
Sbjct: 54  LDVCCGTGDWTIALSKVVGPTGEVTGIDFSENMLEVGKEKTASMENVKLVHGDAMELPFE 113

Query: 173 TDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTF--WLSRYFAD 226
            +  D YV+ G  +   PD    ++E  RVLK GG    +    P  P F    + YF  
Sbjct: 114 DNSFD-YVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLPVFKQMYALYFKF 172

Query: 227 VW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
           V      LF K +E  EW Q++ F      +LKR+
Sbjct: 173 VMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRM 207


>gi|395788170|ref|ZP_10467745.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella birtlesii LL-WM9]
 gi|395409503|gb|EJF76091.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Bartonella birtlesii LL-WM9]
          Length = 262

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 31/175 (17%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAK---QKEPL-KECKIVEGD 165
           N  V+DV GGTG     I+     K +VT+LD +   L+  K   QK  L      VE +
Sbjct: 75  NWKVLDVAGGTGDIAFRILNASCQKAHVTVLDINGSMLSVGKKRAQKNGLASRIDFVEAN 134

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVY 215
           AE LPF     D Y  A  I   P   + ++EA+RVLK GG+  C         ++  +Y
Sbjct: 135 AEHLPFEDQSFDAYTIAFGIRNVPHIDKALKEAFRVLKPGGRFLCLEFSNVEMPLLDKIY 194

Query: 216 PTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             +                   RY  +    FPK++++      AGF  V  + +
Sbjct: 195 DLWSFHVVPKLGKIIANDGDAYRYLVESIRKFPKQDDFAHMINDAGFSRVLYRNL 249


>gi|335440010|ref|ZP_08561734.1| Methyltransferase type 11 [Halorhabdus tiamatea SARL4B]
 gi|334889178|gb|EGM27468.1| Methyltransferase type 11 [Halorhabdus tiamatea SARL4B]
          Length = 226

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 3/145 (2%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           +V+D+G G+G+    +     A     LD+SP   A A++         + GD + LPF 
Sbjct: 41  VVLDLGCGSGYAARALRAAGGAGRAYGLDRSPQMAANAREYTDDAAVGFLVGDFQHLPFE 100

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVYPTFWLSRY--FADVWM 229
           TD  D   S  +I Y PDP   +RE  RVL+ GG   C +  V      + +  + DV M
Sbjct: 101 TDSVDHAFSMEAIYYAPDPVEALRELCRVLRSGGTFYCAVDYVADNPHTAEWDDYVDVEM 160

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRI 254
                  Y E F++AGF   + + I
Sbjct: 161 TRWSRAAYREAFREAGFHVAEQEAI 185


>gi|195659127|gb|ACG49031.1| ubiquinone biosynthesis methyltransferase COQ5 [Zea mays]
          Length = 305

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 48/188 (25%)

Query: 115 VDVGGGTG---FTTLGIVKHV-------------DAKNVTILDQSPHQLAKAKQKEPLK- 157
           +DV GGTG   F  L IVK V             +  ++ + D +P+ L   K++   + 
Sbjct: 105 LDVAGGTGDVAFRVLEIVKSVGHRAMQGTLTETEEGTHIYVCDINPNMLNVGKKRAAERG 164

Query: 158 ----EC-KIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                C   ++GDAE L F     D Y  A  I      ++ + EAYRVLK GG+  C  
Sbjct: 165 YSEEHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKQGGRFLCLE 224

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  I   +Y  +  S                +Y  +    FP +E++ +  Q+AGF
Sbjct: 225 LSHVDVPIFKEIYDVYSFSMVPAIGELVAGDRQSYQYLVESIRRFPNQEKFAQMIQEAGF 284

Query: 247 KDVQLKRI 254
           + V+ + +
Sbjct: 285 QKVEYENL 292


>gi|423599133|ref|ZP_17575133.1| hypothetical protein III_01935 [Bacillus cereus VD078]
 gi|401236117|gb|EJR42583.1| hypothetical protein III_01935 [Bacillus cereus VD078]
          Length = 239

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 9/145 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           V+++G GTG T   + K    K VT ++++   + KAK +   +   I  ++GDAE LP 
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAIEKNEIMIQKAKDRWLFERLNIQLIQGDAERLPC 99

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L+
Sbjct: 100 LND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQLY 158

Query: 232 P-----KEEEYIEWFQKAGFKDVQL 251
                  E E+I  FQ A FK + +
Sbjct: 159 GMKELLTENEWIHLFQAANFKRITI 183


>gi|330717987|ref|ZP_08312587.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           fallax KCTC 3537]
          Length = 239

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 11/117 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLK---EC-KIVEGDAED 168
           ++DV  GT    + + K  DA +  + LD S   LA  ++K  L    EC  +V+GDA  
Sbjct: 55  ILDVATGTADWAIALAKESDAASQVVGLDFSSEMLAVGQKKVNLTAYAECITLVQGDAMA 114

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFW 219
           + FP +  D       +   PDP  G+ E +RVLK GG+  I+       P+   FW
Sbjct: 115 MAFPDNTFDIVTIGFGLRNLPDPMLGLEEMFRVLKPGGQLVILETSQPDNPLIKPFW 171


>gi|56695530|ref|YP_165879.1| hypothetical protein SPO0620 [Ruegeria pomeroyi DSS-3]
 gi|56677267|gb|AAV93933.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 208

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 62  SQPRFI--QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGG 119
           S+P FI  Q +K   W    ++ V      P +      D AL   DL++ + L+ D+G 
Sbjct: 2   SKPEFIARQGRKPTGWLGHIVARVMARETRPEN------DRALSFLDLADGDSLI-DIGC 54

Query: 120 GTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECKIV--EGDAEDLPFPTDY 175
           G G T     + V       +D S   L  A+A+ ++ + + ++     D   LPFP   
Sbjct: 55  GHGETLFQADRIVRLSGSVGVDFSEVMLKRARARNRDAVWDTRMAFHCADTAALPFPDKR 114

Query: 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEE 235
             + +S  +I +WP+P   + EA+RVL+ GG+                F D    FP  +
Sbjct: 115 FGKALSVHTIYFWPNPAAHLAEAFRVLRRGGRFLFCYRSTADRRAVEEFPDTVYRFPSVQ 174

Query: 236 EYIEWFQKAGF 246
           E  E  +  GF
Sbjct: 175 EVEEKLKLVGF 185


>gi|421082847|ref|ZP_15543727.1| Hypothetical protein Y17_4153 [Pectobacterium wasabiae CFBP 3304]
 gi|401702463|gb|EJS92706.1| Hypothetical protein Y17_4153 [Pectobacterium wasabiae CFBP 3304]
          Length = 256

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+DVG G G  +    + V    V   D S   L   ++A +++ L   ++ +G AE LP
Sbjct: 49  VIDVGCGAGHASFVAAQTV--AEVVAYDLSSQMLDVVSQAAEQKGLNNIRVQQGVAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVWM 229
           F    AD  +S  S  +W D  + + E  RVLK GG+  ++  V P    L  Y   V  
Sbjct: 107 FDNGSADIIISRYSAHHWHDVGQALHEMRRVLKPGGRVIMMDVVSPGHPLLDIYLQTVEK 166

Query: 230 LFPKEE-------EYIEWFQKAGF 246
           L            E++  F +AGF
Sbjct: 167 LRDTSHVRNYAPGEWLSLFTEAGF 190


>gi|163845177|ref|YP_001622832.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis ATCC 23445]
 gi|189037016|sp|A9WW74.1|UBIE_BRUSI RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|163675900|gb|ABY40010.1| ubiquinone/menaquinone biosynthesis methyltransferase [Brucella
           suis ATCC 23445]
          Length = 269

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 33/170 (19%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           +DV GGTG     IV+    + +VTILD +   L     +A +K  +   + VE +AE+L
Sbjct: 86  LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVEANAEEL 145

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFW 219
           PF  +  D Y  A  I   P   + + EAY VLK GG+  C         ++  VY   W
Sbjct: 146 PFEDNSFDAYTIAFGIRNVPHIDKALSEAYCVLKPGGRFLCLEFSEVELPVLDKVYDE-W 204

Query: 220 LSR-----------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
             R                 Y  +    FPK++++    +KAGF+ V  +
Sbjct: 205 SFRAIPRIGKMITGDADSYSYLVESIRKFPKQQDFAAMIEKAGFERVSYR 254


>gi|270308580|ref|YP_003330638.1| SAM-dependent methyltransferase [Dehalococcoides sp. VS]
 gi|270154472|gb|ACZ62310.1| SAM-dependent methyltransferase [Dehalococcoides sp. VS]
          Length = 206

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 12/186 (6%)

Query: 76  FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK 135
           ++  ++ ++D  +  G +++ +R+ A+E A +   + +  D+G GTG+ T  +++    K
Sbjct: 6   YFNQVADIWDE-MRQGFFSDRIREAAIEAAGVKPES-IAADIGAGTGYMTAELLR----K 59

Query: 136 N--VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQR 193
           N  V  +DQS   LAK K K        ++     LP      D   +   + +  DP  
Sbjct: 60  NCRVVAVDQSSAMLAKIKSKFGAYGVSCLQASGNTLPLKDQSIDYSFANMFLHHVEDPAG 119

Query: 194 GIREAYRVLKLGGKACIIGPVYPTFW-LSRYFADVWMLFPKEEEYIE-WFQKAGFKDVQL 251
            I+E  R+L  GG+  +      T   + +   D W  F  E + ++ WF++AG K++++
Sbjct: 120 AIKEMSRILLPGGRLVVTDLCLHTHADMQKEHHDHWPGF--ELKAVKGWFEQAGLKNIRV 177

Query: 252 KRIGPK 257
           + +  K
Sbjct: 178 ETLNQK 183


>gi|417110265|ref|ZP_11963600.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Rhizobium etli CNPAF512]
 gi|327188619|gb|EGE55829.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Rhizobium etli CNPAF512]
          Length = 507

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 323 VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSANLTFVEANAEE 382

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 383 LPFEAASFDAYTIAFGIRNVPRIDVALAEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 442

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 443 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 489


>gi|261250098|ref|ZP_05942675.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|417955034|ref|ZP_12598060.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           orientalis CIP 102891 = ATCC 33934]
 gi|260939602|gb|EEX95587.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|342814082|gb|EGU49034.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           orientalis CIP 102891 = ATCC 33934]
          Length = 260

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 31/168 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           ++D+GGGTG  T    + V  K   IL   + S   + + K ++   +     V+ +AE+
Sbjct: 76  ILDLGGGTGDLTAKFSRIVGEKGHVILADINNSMLNVGRDKLRDNGIVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPFP DY D    +  +    D  + +R  YRVLK GG+  +          +  +Y T+
Sbjct: 136 LPFPDDYFDAITISFCLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPILEPLSKIYDTY 195

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
                              RY A+   + P +E       +AGF +  
Sbjct: 196 SFHLLPKMGELVANDAESYRYLAESIRMHPNQETLKGMMDEAGFDNTS 243


>gi|48474755|sp|O66128.1|UBIE_MICLU RecName: Full=Demethylmenaquinone methyltransferase; AltName:
           Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|2982680|dbj|BAA25267.1| 2-hexaprenyl-1,4-naphthoquinone methyltransferase [Micrococcus
           luteus]
          Length = 246

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           +DV  GTG  T+ + + V      I LD S + L+ A+ K   ++  +++ G+A +LPF 
Sbjct: 63  LDVCCGTGDWTIQMAQAVGKNGHVIGLDFSENMLSVAQGKTNHIQNIELIHGNAMELPFE 122

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFADV 227
            +  D       +   PD ++G+ E YRVLK GG   ++   +PT  + +     YF  V
Sbjct: 123 DNIFDYTTIGFGLRNLPDYKKGLEEMYRVLKPGGMIVVLETSHPTMPVFKQGYKLYFKYV 182

Query: 228 WMLFPK-----EEEYIEWFQKAGFK 247
             LF K      +EY  W Q++ F+
Sbjct: 183 MPLFGKVFAKSMKEY-SWLQQSAFE 206


>gi|334129021|ref|ZP_08502896.1| UbiE/COQ5 family methyltransferase [Centipeda periodontii DSM 2778]
 gi|333385755|gb|EGK56982.1| UbiE/COQ5 family methyltransferase [Centipeda periodontii DSM 2778]
          Length = 208

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKE--CKIVEGDAEDL 169
           V+D G G G      ++ VD  +VT LD S   + KA++  +  ++   C IV+G+  +L
Sbjct: 49  VLDCGCGGGANIAVFLRMVDEGHVTGLDYSTVSVEKAREVNRAAIEAGCCAIVQGNVLEL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           PF  D  D   +  ++ +WP+  R   E +RVLK GG
Sbjct: 109 PFERDRFDVVTAFETVYFWPEIARCFTEIHRVLKAGG 145


>gi|381211673|ref|ZP_09918744.1| methyltransferase type 11 [Lentibacillus sp. Grbi]
          Length = 256

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 28/182 (15%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGD 165
           N++  V+DV  GTG  +  +   V    VT LD SP  + +  Q   +  +   + V+G 
Sbjct: 42  NKSHSVLDVAAGTGIVSRAMAPFV--SQVTSLDLSPDMIRQGNQENKQHQISNIQFVQGS 99

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225
           AE+LPF  D  D  V   +  ++ DP +  RE  R  K G    +I              
Sbjct: 100 AENLPFEDDSFDIVVCRLAFHHFTDPYKVFREMVRCGKRGSTIAVID------------- 146

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPL 285
              M+ PKE E         +   ++ R  P   + + R  LI     +G+   S ++ L
Sbjct: 147 ---MISPKESEL-----NQSYNQYEILR-DPSHVKALTREELINMYKTSGISILSSEA-L 196

Query: 286 QV 287
           QV
Sbjct: 197 QV 198


>gi|325285562|ref|YP_004261352.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Cellulophaga lytica DSM 7489]
 gi|324321016|gb|ADY28481.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Cellulophaga lytica DSM 7489]
          Length = 242

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 31/175 (17%)

Query: 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK----IVE 163
           S + + ++D+  GTG   + + K   A  +T LD SP  L   KQK   K       ++ 
Sbjct: 55  SKKPVTILDIATGTGDLAINLTK-TGATKITGLDISPGMLEVGKQKVAAKNLSNTIDMII 113

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT------ 217
           GD+E+LPF  +  D    A  +  + +  +G+ E  RVLK  G   ++    PT      
Sbjct: 114 GDSENLPFSDNTFDAITVAFGVRNFENLDKGLTEILRVLKPKGTFVVLETSVPTKTPFKQ 173

Query: 218 ---FWLS-----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
              F+                    Y ++   +FP  EE+    QK GF  ++ K
Sbjct: 174 GYKFYTKYILPTIGKLFSKDRTAYSYLSESASIFPHGEEFNNILQKNGFISIENK 228


>gi|358369377|dbj|GAA85992.1| ubiquinone biosynthesis methyltransferase Coq5 [Aspergillus
           kawachii IFO 4308]
          Length = 315

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 39/180 (21%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKE----- 154
           D + R   ++D+ GGTG     ++ H    N      VTI D +   LA+ +++      
Sbjct: 109 DTAGRGWNILDIAGGTGDIAFRMLDHATNINNDHETRVTIADINADMLAEGQKRSVQTPY 168

Query: 155 -PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
                   ++G+A+ +P  P +  D Y     I  + D Q  + EA+RVLK GG  AC  
Sbjct: 169 YNTNRLSFMQGNAQSMPSIPDNSVDLYTVVFGIRNFTDKQAALNEAFRVLKPGGVFACME 228

Query: 210 -------IIGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                  +   +Y  +  S                +Y  +    FP +EE+    QKAGF
Sbjct: 229 FSKVDNALFNAIYKQWSFSAIPMIGQLVAGDRDSYQYLVESIEQFPSQEEFRGMIQKAGF 288


>gi|114319233|ref|YP_740916.1| demethylmenaquinone methyltransferase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225627|gb|ABI55426.1| demethylmenaquinone methyltransferase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 258

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 31/170 (18%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKE----PLKECKIVEG 164
           R   ++D+  GTG  TL + K V  +  V + D +   LA+ + +      +   +    
Sbjct: 70  RGHRILDLAAGTGDLTLALSKRVGPEGQVVMTDINEAMLARGRDRMIDAGRVDNVRYALC 129

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI-------IGPVYPT 217
           +AE LPFP  Y DR   A  +         +RE YRVLK GG A +       I P+ P 
Sbjct: 130 NAEALPFPDQYFDRVTIAFGLRNVTHKDTALREMYRVLKPGGWATVLEFSRVYIPPLRPV 189

Query: 218 FWL-------------------SRYFADVWMLFPKEEEYIEWFQKAGFKD 248
           + L                    RY A+   + P +E+      +AGF+D
Sbjct: 190 YDLYSFRVLPLMGRLVANDAESYRYLAESIRMHPPQEQLAAMMAEAGFED 239


>gi|21232758|ref|NP_638675.1| methyltransferase in menaquinone/biotin biosynthesis [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66767168|ref|YP_241930.1| methyltransferase in menaquinone/biotin biosynthesis [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|21114575|gb|AAM42599.1| methyltransferase in menaquinone/biotin biosynthesis [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66572500|gb|AAY47910.1| methyltransferase in menaquinone/biotin biosynthesis [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 249

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 10/153 (6%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGD 165
           +RN  ++D+G G G  +  +   +D   V   D S   L   A       L + + ++G 
Sbjct: 38  HRNGRLLDLGCGAGHVSFQLAPLMD--EVVAYDLSADMLEVVAATAADRGLTQMRTLQGV 95

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYF 224
           AE LPF +   D  VS  S  +W D  + +RE  RVL+ GG A +I  V P    L  + 
Sbjct: 96  AERLPFESGSMDVVVSRYSAHHWSDLGQALREVRRVLRPGGIAALIDVVAPGLPLLDTHL 155

Query: 225 ADVWML----FPKEEEYIEWFQKAGFKDVQLKR 253
             + +L      ++    +W Q  G   + ++R
Sbjct: 156 QAIELLRDTSHVRDYSVAQWLQVVGDAGLHVQR 188


>gi|354595701|ref|ZP_09013718.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brenneria sp. EniD312]
 gi|353673636|gb|EHD19669.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Brenneria sp. EniD312]
          Length = 251

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 31/172 (18%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQL----AKAKQKEPLKECKIVEG 164
           R   V+DV GGTG  T    + V D   V + D +   L     K + K  +     V+ 
Sbjct: 63  RGQRVLDVAGGTGDLTAKFSRIVGDEGEVVLADINASMLKVGREKLRNKGIINNVSYVQA 122

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LS-- 221
           +AE+LPFP D+ D    +  +    D  + +R  YRVLK GG+  ++    PT   LS  
Sbjct: 123 NAEELPFPDDFFDCITISFGLRNVTDKNKALRSMYRVLKPGGRLLVLEFSKPTLKPLSKV 182

Query: 222 -----------------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
                                  RY A+   + P +E       +AGF  V 
Sbjct: 183 YDLYSFHVLPRIGEMVARDAGSYRYLAESIRMHPDQETLKGMMSEAGFDSVN 234


>gi|433650434|ref|YP_007295436.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium smegmatis JS623]
 gi|433300211|gb|AGB26031.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium smegmatis JS623]
          Length = 297

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           D+S   +L V  G G G + L  V+ +   + T LD +P  +A  +++  L   + V GD
Sbjct: 105 DISGTRVLEVSCGHGGGASYL--VRSLQPASYTALDFNPDGIAYCRKRHDLPGLEFVHGD 162

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           AE LPFP D  D  ++  +   +P   R + E  RVL+ GG+
Sbjct: 163 AEALPFPDDSYDVVINVEASHAYPRFSRFLAEVARVLRPGGQ 204


>gi|296283000|ref|ZP_06860998.1| transcriptional regulator [Citromicrobium bathyomarinum JL354]
          Length = 329

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 23/143 (16%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAK-QKEPLKECKIVEGDAEDLP 170
           ++D+G GTG      V+   A  +  LD+S   L  A+AK Q  P ++ ++V+GD   LP
Sbjct: 159 LLDIGTGTGRMAELFVE--GASRIVALDKSLEMLRVARAKLQHLPAEKVELVQGDFLSLP 216

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F +   D  +    + Y PDP   +REA RVL+ GG+  I+            FA     
Sbjct: 217 FDSASFDTVLFHQVLHYAPDPLVPLREAARVLRPGGRIAIVD-----------FA----- 260

Query: 231 FPKEEEYIEWFQKA--GFKDVQL 251
             ++EE  E FQ A  GF+D QL
Sbjct: 261 AHQQEELRERFQHARLGFEDGQL 283


>gi|420148675|ref|ZP_14655938.1| Demethylmenaquinone methyltransferase (Menaquinone biosynthesis
           methyltransferase ubiE) [Lactobacillus gasseri CECT
           5714]
 gi|398399654|gb|EJN53291.1| Demethylmenaquinone methyltransferase (Menaquinone biosynthesis
           methyltransferase ubiE) [Lactobacillus gasseri CECT
           5714]
          Length = 237

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 6/126 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQL----AKAKQKEPLKECKIVEGDAE 167
            V+D+  GTG  T+ + K V  + NV  LD +   L     K +Q++  KE ++ +GDA 
Sbjct: 53  FVLDLCCGTGDITIALAKQVGPSGNVIGLDFNQEMLDLAQQKIRQQDLQKEIQLKQGDAM 112

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY-FAD 226
           +LP+P    D       +   PD  + ++E YRVLK  GK  ++    PT  L +  +  
Sbjct: 113 ELPYPDQSFDTVTIGFGLRNVPDANQVLKEIYRVLKPTGKVGVLETSQPTNPLIKLGWKS 172

Query: 227 VWMLFP 232
            + LFP
Sbjct: 173 YFKLFP 178


>gi|281425495|ref|ZP_06256408.1| methlytransferase, UbiE/COQ5 family [Prevotella oris F0302]
 gi|327313831|ref|YP_004329268.1| methyltransferase domain-containing protein [Prevotella denticola
           F0289]
 gi|281400488|gb|EFB31319.1| methyltransferase, UbiE/COQ5 family [Prevotella oris F0302]
 gi|326946019|gb|AEA21904.1| methyltransferase domain protein [Prevotella denticola F0289]
          Length = 233

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 62  SQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTED---MRDDALE--PADLSNRNMLVVD 116
           S  R ++H  +     ++ S +Y  ++    W ED   +    L+  P D   R   ++D
Sbjct: 8   SYKRMMEHYDDVLTGRKWWSRMYMRLV----WKEDGNLLARKVLDFIPDDFHGR---LLD 60

Query: 117 VGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA---KQKEPLKECKIVEGDAEDLPFPT 173
           V  GT   T G  + + A  +  LD S   +A A   K+ E +    +V+GD  +LP+  
Sbjct: 61  VPVGTAIFTAGKYRRMKAAEIVGLDYSEEMIAIATLRKETEDIDNLSLVQGDVGELPYTD 120

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           +  D  +S    + +PD  +   E +RVLK GG  C  G  Y
Sbjct: 121 ESFDYVLSMNGFQAFPDKDKAFAEIFRVLKPGG--CFCGCFY 160


>gi|258380684|emb|CAZ67057.1| MdnF protein [Planktothrix rubescens NIVA-CYA 98]
          Length = 283

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 13/149 (8%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNML--------VVDVGGGTGFTTLGIVKHVDAKNV 137
              N G+W  D ++      +L  + +         ++DVG G G TT  ++ +  +  +
Sbjct: 45  EFFNVGYWRSDTQNQQESCFNLMEKLLEFIPEKQGNILDVGSGLGATTSYLLNYYSSAAI 104

Query: 138 TILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
             ++ SP Q+ ++    P  +CK +  DA ++ F  ++ D  +   S  Y+   ++ ++E
Sbjct: 105 VGINISPTQIERSILNAP--DCKFLLMDAVNMEFEDNFFDNIICVESAFYFDTREKFLKE 162

Query: 198 AYRVLKLGGKACIIGPVYPTFWLSRYFAD 226
           A+RVLK GG   +    + T   + Y  D
Sbjct: 163 AWRVLKPGGNLVLSDMSFAT---TEYLGD 188


>gi|156394191|ref|XP_001636710.1| predicted protein [Nematostella vectensis]
 gi|156223815|gb|EDO44647.1| predicted protein [Nematostella vectensis]
          Length = 295

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 42/183 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVD------------AKNVTILDQSPHQLAKAKQKEPLKECKI 161
           ++DV GGTG      + H              + +VT+ D + + L   K+K      K 
Sbjct: 100 LLDVAGGTGDIAFRFLNHTKKKAKQKKETENLSSHVTVCDINKYMLRIGKKKGQTLNLKK 159

Query: 162 ----VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC------- 209
               V GDA+ LPF  D  D Y  A  I      Q  + EA+RVL  GG+  C       
Sbjct: 160 GISWVAGDAQSLPFADDSFDAYTIAFGIRNVTRIQEALYEAFRVLSPGGRFLCLEFSEVT 219

Query: 210 -----------------IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
                            ++G V  + W S +Y  +    FP +EE+    + AGF++V  
Sbjct: 220 NPVLARLYDGFSFNVIPVMGHVVASDWNSYQYLVESIRQFPNQEEFKGMIEDAGFRNVTY 279

Query: 252 KRI 254
           + +
Sbjct: 280 ENL 282


>gi|293408299|ref|ZP_06652138.1| SAM-dependent methyltransferase [Escherichia coli B354]
 gi|291471477|gb|EFF13960.1| SAM-dependent methyltransferase [Escherichia coli B354]
          Length = 256

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D++  A+  AD  N ++L  D+G G G  +    ++V A  V   D S   L   A+A +
Sbjct: 32  DLQRLAVRLADYPNASVL--DMGCGAGHASFVAAQNVSA--VVAYDLSAQMLDVVAQAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
              LK     +G AE LPF  +  D  +S  S  +W D    +RE  RVLK GG+  ++ 
Sbjct: 88  ARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRVLKPGGRLIVMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|227544100|ref|ZP_03974149.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|338202493|ref|YP_004648638.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           reuteri SD2112]
 gi|227185918|gb|EEI65989.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|336447733|gb|AEI56348.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           reuteri SD2112]
          Length = 233

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPT 173
           +DV  GTG  T+ + K + A  VT LD +   L  AK+K  +     +V+GDA  LPF  
Sbjct: 56  LDVCCGTGDLTIALAKRISAGRVTGLDFNKEMLEIAKEKTKMIGNLFLVQGDAMALPFDD 115

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           +  D       +   PD  + + E YRVLK GG+   +    PT
Sbjct: 116 NSFDIVTIGFGLRNVPDADKALSEIYRVLKPGGQFVSLEMSQPT 159


>gi|441202239|ref|ZP_20971193.1| putative methyltransferase [Mycobacterium smegmatis MKD8]
 gi|440630306|gb|ELQ92079.1| putative methyltransferase [Mycobacterium smegmatis MKD8]
          Length = 265

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG 164
           ADLS + +L +  G G G +   I + +   + T LD +P  +   ++K  +K    V+G
Sbjct: 73  ADLSGKQVLEIGCGHGGGASY--IARALKPASYTGLDLNPTGIEFCRKKHNVKGLDFVQG 130

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           DAEDLPFP    D  ++  S   +P   + + E  RVL+ GG
Sbjct: 131 DAEDLPFPDHSFDAVINVESSHLYPHFSKFLGEVARVLRPGG 172


>gi|239908978|ref|YP_002955720.1| ArsR family transcriptional regulator [Desulfovibrio magneticus
           RS-1]
 gi|239798845|dbj|BAH77834.1| ArsR family transcriptional regulator [Desulfovibrio magneticus
           RS-1]
          Length = 310

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 9/155 (5%)

Query: 102 LEPADL-----SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
           L+PA L      +R     D+G G G   L  V    A  V  +D SP  LA A+++   
Sbjct: 136 LDPAALVREVMPDRMAAAADLGCGPG--DLLPVLAERAGAVIGVDSSPSMLALAERRTHG 193

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-PVY 215
               +  G+ E LP     A   V   ++ + PDP   + EA RVL   G+  +I    +
Sbjct: 194 LPVSVRMGELEHLPMANGEAAFAVICLTLHHLPDPAAALAEARRVLAPDGRLVVIDFAPH 253

Query: 216 PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
               + R F D W+ F + E+  EW  +AGF   Q
Sbjct: 254 EDEAMRRRFGDRWLGFSR-EKLTEWLHRAGFDLAQ 287


>gi|357026666|ref|ZP_09088760.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Mesorhizobium amorphae CCNWGS0123]
 gi|355541407|gb|EHH10589.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Mesorhizobium amorphae CCNWGS0123]
          Length = 258

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 114 VVDVGGGTGFTTLGIVK--HVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAE 167
           V+DV GGTG     IV+  H +A + T+LD +   LA    +A++K        VE +AE
Sbjct: 74  VLDVAGGTGDIAFRIVEASHGNA-HATVLDINGSMLAVGRDRAEKKGLSDNTDFVEANAE 132

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           +LPFP    D Y  A  I   P     + EAYRVLK GG+
Sbjct: 133 ELPFPDATFDAYSIAFGIRNVPRIDVALTEAYRVLKPGGR 172


>gi|354546548|emb|CCE43280.1| hypothetical protein CPAR2_209250 [Candida parapsilosis]
          Length = 318

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 45/190 (23%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQLAK--- 149
           D  + P+  S+  +  +DV GGTG    G+++H + +       +T+ D +P  L +   
Sbjct: 109 DAGMRPS--SSEPLHFLDVAGGTGDIAFGLLEHAEKRFGDVESKITVADINPDMLKEGEL 166

Query: 150 -------AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
                  A + +   E  +  G+  D   P +  D Y  A  I  + D Q+G+  AYRVL
Sbjct: 167 RYAKSKWANEGKNRVEFLVQNGETMD-AIPDNSKDVYTIAFGIRNFTDIQKGLNTAYRVL 225

Query: 203 KLGGK-AC---------IIGPVYPTFWLS----------------RYFADVWMLFPKEEE 236
           K GG  AC         +I   Y  +  S                +Y  +    FPK+EE
Sbjct: 226 KPGGIFACLEFSQVENPVIDYAYQAYSFSLLPLMGQLIANDRDSYQYLVESIQKFPKQEE 285

Query: 237 YIEWFQKAGF 246
           +    +KAGF
Sbjct: 286 FKSMIEKAGF 295


>gi|255932283|ref|XP_002557698.1| Pc12g08680 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582317|emb|CAP80495.1| Pc12g08680 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 314

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 78/204 (38%), Gaps = 50/204 (24%)

Query: 85  DHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKN----- 136
           DH +   NPG     M  D         R   ++D+ GGTG     ++ H    N     
Sbjct: 92  DHFVRSLNPGSCLPAMTAD--------QRGWNILDIAGGTGDIAFRMLDHATNVNHDMET 143

Query: 137 -VTILDQSPHQLAKAKQKE------PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYW 188
            VTI D +   LA+ +++              VE +AE +P  P    D Y     I  +
Sbjct: 144 RVTISDINADMLAEGRKRSLDTPYYNTSRLDFVEANAEHMPHIPDSSVDLYTVVFGIRNF 203

Query: 189 PDPQRGIREAYRVLKLGGK-AC---------IIGPVYPTFWLS----------------R 222
            D Q  + EAYRVLK GG  AC         ++  +Y  +  S                +
Sbjct: 204 TDKQAALNEAYRVLKPGGVFACMEFSKVDNPVLDGIYKRWNFSAIPLIGQVVAGDRDSYQ 263

Query: 223 YFADVWMLFPKEEEYIEWFQKAGF 246
           Y  +    FP +EE+    QKAGF
Sbjct: 264 YLVESIERFPSQEEFRGMIQKAGF 287


>gi|348170254|ref|ZP_08877148.1| type 11 methyltransferase [Saccharopolyspora spinosa NRRL 18395]
          Length = 244

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 77/194 (39%), Gaps = 14/194 (7%)

Query: 72  EAFWFYRFLSIVYDHVINPGHWTEDM----RDDALEPADLSNRNMLVVDVGGGTGFTTLG 127
           ++FW  +  S +YDH  +       M       A  PA        V+D+G G G  T  
Sbjct: 46  QSFWESKAGSALYDHAQSLTRRVLPMWFGLPTRAYPPA-----GGRVLDIGCGPGNVTAR 100

Query: 128 IVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
           + + V    + I +D S   LA+A + E       +  DA +LPFP    D   S  +++
Sbjct: 101 LGRAVGPTGLAIGIDVSGAMLARAARTETTDNVGFIRADARELPFPDSTFDLVTSFAALQ 160

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV----WMLFPKEEEYIEWFQ 242
             PDP   +    RVL   G   ++ P      L R    V     ++F   +E  E  Q
Sbjct: 161 LIPDPHDVLAGMARVLAPAGWIAVMVPTPRGSLLHRAAKLVGGRSGLVFFDPDEVAEPLQ 220

Query: 243 KAGFKDVQLKRIGP 256
            AG   V   R GP
Sbjct: 221 AAGVGVVHTHRSGP 234


>gi|312882619|ref|ZP_07742358.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369704|gb|EFP97217.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 260

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           V+D+GGGTG  T    + V  K   IL   + S   + + K ++   +     V+ +AE+
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGEKGHVILADINNSMLNVGRDKLRDTGIVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR-YFAD 226
           LPFP DY D    +  +    D  + +R  +RVLK GG+  ++    P F  LS+ Y A 
Sbjct: 136 LPFPDDYFDAITISFCLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPVFEPLSKVYDAY 195

Query: 227 VWMLFPK 233
            + L PK
Sbjct: 196 SFHLLPK 202


>gi|257053325|ref|YP_003131158.1| Methyltransferase type 11 [Halorhabdus utahensis DSM 12940]
 gi|256692088|gb|ACV12425.1| Methyltransferase type 11 [Halorhabdus utahensis DSM 12940]
          Length = 226

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 3/145 (2%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           +V+D+G G+G+    +     A     LD+SP     A++         + GD + LPF 
Sbjct: 41  VVLDLGCGSGYAARALRAAGGAGRAYGLDRSPQMARNAREYTDDAAVGFLVGDFQHLPFG 100

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVYPTFWLSRY--FADVWM 229
           TD  D   S  +I Y PDP   +RE  RVL+ GG   C +  V      + +  + DV M
Sbjct: 101 TDSVDHAFSMEAIYYAPDPVEALRELRRVLRSGGTFYCAVDYVADNPHTAEWDEYVDVAM 160

Query: 230 LFPKEEEYIEWFQKAGFKDVQLKRI 254
                 EY E F++AGF   + + I
Sbjct: 161 TRWSRAEYREAFREAGFHVAEQEAI 185


>gi|153953626|ref|YP_001394391.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219854248|ref|YP_002471370.1| hypothetical protein CKR_0905 [Clostridium kluyveri NBRC 12016]
 gi|146346507|gb|EDK33043.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219567972|dbj|BAH05956.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 210

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 12/166 (7%)

Query: 95  EDMRDDALEPADLSNRNM---LVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH---QLA 148
           ED  +D L+   LS  N+   +  D+G GTGF +L + +  +AK V  +D S +   +L 
Sbjct: 19  EDYFEDRLKYIVLSKFNINDKICADLGCGTGFISLALSQ--EAKLVFSIDNSRNMLKELH 76

Query: 149 KAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA 208
                  +K    ++G A D+P   +  D      ++ +  D ++ ++EAYR+LK  G  
Sbjct: 77  DTSSDRGIKNIYPIKGSAVDIPLFDESIDAVYMNMALHHVVDAEKVVKEAYRILKNKG-T 135

Query: 209 CIIGPV--YPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
            II  V  +   W      D W+ F   E+   W  +AGFK + ++
Sbjct: 136 FIISDVEEHDGEWAKIEMHDEWLGFS-HEQINHWMDEAGFKKIGIE 180


>gi|29827025|ref|NP_821659.1| ubiE/COQ5 methyltransferase family protein [Streptomyces
           avermitilis MA-4680]
 gi|29604123|dbj|BAC68194.1| putative methyltransferase [Streptomyces avermitilis MA-4680]
          Length = 273

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           +M V+D+G G G   L  +     + +  +D SPH LA A+++  L E K+ EG A++LP
Sbjct: 48  SMRVLDLGCGDGLL-LEFLARRSGRQLAGVDLSPHSLALARRRPALSEAKLEEGRAQELP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           F  D  D  VS  ++    + ++   E  RVL  GG
Sbjct: 107 FADDSFDACVSHMALMLMSEIEQVASEVARVLSPGG 142


>gi|393213375|gb|EJC98871.1| UbiE/COQ5 methyltransferase [Fomitiporia mediterranea MF3/22]
          Length = 314

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 38/170 (22%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKEPLK------ECKIV 162
           +DV GGTG   L I+ H   K+      V +LD +P  LA+ +++  L       +    
Sbjct: 116 LDVAGGTGDIALRILDHAREKHYDRETTVEVLDINPDMLAEGRKRFKLTMYHNTPQISFR 175

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC---------IIG 212
           EG+A+ L  P++  D Y  A  I         ++EA+RVLK GG  AC         ++ 
Sbjct: 176 EGNAQKLDLPSNTYDLYTIAFGIRNCTSIPDVLKEAHRVLKPGGTFACLEFSHVTNPLLS 235

Query: 213 PVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
            VY  +  S                +Y  +    FP +EE+ +  + AGF
Sbjct: 236 SVYDQYSFSILPLLGSILASDRASYQYLVESIRRFPPQEEFGQMIRDAGF 285


>gi|336477038|ref|YP_004616179.1| type 11 methyltransferase [Methanosalsum zhilinae DSM 4017]
 gi|335930419|gb|AEH60960.1| Methyltransferase type 11 [Methanosalsum zhilinae DSM 4017]
          Length = 258

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 72  EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH 131
           E +W +R  S   +   N G    ++   +L P  + N  + V+DVG G GF  L + + 
Sbjct: 8   EEYWDWRSTSYA-NGATNLGDEERELWKQSLSPY-IGNEPLRVLDVGTGRGFLALLLAEM 65

Query: 132 VDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPFPTDYADRYVSAGSIEYWP 189
               +VT +D S   + +A ++   +   I   + DAEDLPF  D  D  VS   +   P
Sbjct: 66  --GHDVTAVDISQAMINEATKESKSRNLNIRFFKNDAEDLPFDNDSFDLVVSKYLLWTLP 123

Query: 190 DPQRGIREAYRVLKLGGKACII 211
           +P + + E  RVL   GK   I
Sbjct: 124 NPDKALEEWNRVLITNGKILAI 145


>gi|15893857|ref|NP_347206.1| methyltransferase [Clostridium acetobutylicum ATCC 824]
 gi|337735784|ref|YP_004635231.1| methyltransferase [Clostridium acetobutylicum DSM 1731]
 gi|15023435|gb|AAK78546.1|AE007572_1 Putative methyltransferase [Clostridium acetobutylicum ATCC 824]
 gi|336290181|gb|AEI31315.1| putative methyltransferase [Clostridium acetobutylicum DSM 1731]
          Length = 209

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECK--IVEGDAEDL 169
           ++D+G G G T   + K  +   V  +D S   +  A    KE +KE +  I E   E L
Sbjct: 49  MLDIGCGGGRTVNRLSKAAEEGEVYGIDYSSDCVRWASEYNKELIKEGRVHISEASVEKL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           PF  +  D   +  +I +WP+ +  I+E  RVLK GGK  II  +Y
Sbjct: 109 PFEDNKFDVVTAVETIYFWPNVEENIKEVNRVLKKGGKFIIINEIY 154


>gi|116250140|ref|YP_765978.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|189037603|sp|Q1MME0.1|UBIE_RHIL3 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|115254788|emb|CAK05862.1| putative Ubiquinone/menaquinone biosynthesis methyltransferase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 258

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAGSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|384457295|ref|YP_005669715.1| Putative methyltransferase [Clostridium acetobutylicum EA 2018]
 gi|325507984|gb|ADZ19620.1| Putative methyltransferase [Clostridium acetobutylicum EA 2018]
          Length = 214

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECK--IVEGDAEDL 169
           ++D+G G G T   + K  +   V  +D S   +  A    KE +KE +  I E   E L
Sbjct: 54  MLDIGCGGGRTVNRLSKAAEEGEVYGIDYSSDCVRWASEYNKELIKEGRVHISEASVEKL 113

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
           PF  +  D   +  +I +WP+ +  I+E  RVLK GGK  II  +Y
Sbjct: 114 PFEDNKFDVVTAVETIYFWPNVEENIKEVNRVLKKGGKFIIINEIY 159


>gi|91772162|ref|YP_564854.1| methyltransferase type 11 [Methanococcoides burtonii DSM 6242]
 gi|91711177|gb|ABE51104.1| methyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 208

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 8/149 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL 169
           ++DVG G G     + +  +   +  +D S   +  A +       +    I+E    +L
Sbjct: 48  ILDVGCGGGRAVSILAELAEKGKIYGVDHSQDMVDLATEYNSKEIGIGRVTIMESSVSEL 107

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR----YFA 225
           PFP D  D   +  +  +WPD + G+RE  RVLK GG   I+  +Y     +     Y  
Sbjct: 108 PFPYDKFDLVTAFETCYFWPDLEEGLREIKRVLKKGGTLLIVNEMYDHELFAERNTPYNT 167

Query: 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
              M     EEY +    AGF  V++  +
Sbjct: 168 AKGMNIYSAEEYRKALNSAGFLAVEIDEV 196


>gi|27364356|ref|NP_759884.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           vulnificus CMCP6]
 gi|37678361|ref|NP_932970.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           vulnificus YJ016]
 gi|320157750|ref|YP_004190129.1| DNA recombination protein RmuC [Vibrio vulnificus MO6-24/O]
 gi|48474449|sp|Q8DDP9.1|UBIE_VIBVU RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|61217315|sp|Q7MQ33.1|UBIE_VIBVY RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|27360475|gb|AAO09411.1| Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
           [Vibrio vulnificus CMCP6]
 gi|37197100|dbj|BAC92941.1| ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Vibrio
           vulnificus YJ016]
 gi|319933062|gb|ADV87926.1| DNA recombination protein RmuC [Vibrio vulnificus MO6-24/O]
          Length = 260

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 7/132 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           V+D+GGGTG  T    + V  K   IL   + S   + + K ++   +     V+ +AE+
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGEKGHVILADINNSMLNVGRDKLRDSGIVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR-YFAD 226
           LPFP DY D    +  +    D  + +R  +RVLK GG+  ++    P F  LS+ Y A 
Sbjct: 136 LPFPDDYFDIITISFCLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPVFDPLSKVYDAY 195

Query: 227 VWMLFPKEEEYI 238
            + L PK  E +
Sbjct: 196 SFHLLPKMGELV 207


>gi|424873353|ref|ZP_18297015.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. viciae WSM1455]
 gi|393169054|gb|EJC69101.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. viciae WSM1455]
          Length = 258

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAGSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|422764638|ref|ZP_16818384.1| methyltransferase domain-containing protein [Escherichia coli
           E1167]
 gi|324115454|gb|EGC09396.1| methyltransferase domain-containing protein [Escherichia coli
           E1167]
          Length = 256

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 22/170 (12%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V A  V   D S   L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNVSA--VVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P         D+W+ 
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRMIVMDVMSP----GHPVRDIWL- 160

Query: 231 FPKEEEYIEWFQKAGFKDVQLKR--IGPKWYRGVRRHGLIMGCSVTGVKP 278
                + +E       +D  L R     +W R +    LI+   +T   P
Sbjct: 161 -----QTVE-----ALRDTSLVRNYASGEWLRLINEANLIVDNLITDKLP 200


>gi|400976631|ref|ZP_10803862.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Salinibacterium sp. PAMC 21357]
          Length = 261

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 30/167 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+  GTG ++  +  H +   V  LD S   + +A+++   K+ + V+GDAE LPF  
Sbjct: 50  ILDIASGTGTSSAAL--HRNGARVVGLDFSTGMVEQARKRH--KKIEFVQGDAEQLPFGD 105

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR----------- 222
           +  D    +  +    DP+  + E +RVLK GG+  I     P   + R           
Sbjct: 106 NEFDAVTISFGLRNINDPRAALSEMFRVLKPGGRLVITEFSKPPVAIVRAGYFTYLNRVM 165

Query: 223 ---------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
                          Y A+    +P + E  +W + AGF  V  + +
Sbjct: 166 PIIADRTSSNPEAYTYLAESIREWPDQGELSQWIRAAGFTRVAYRNL 212


>gi|405379147|ref|ZP_11033049.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Rhizobium sp. CF142]
 gi|397324280|gb|EJJ28643.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Rhizobium sp. CF142]
          Length = 267

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
           G W+  +    ++ A L++    ++DVG GTG  T  + ++ D K ++ +D SP  +  A
Sbjct: 18  GRWSRRLAPGLIDFAGLADGES-ILDVGCGTGSLTFTLAENPDLKAISAIDFSPVFVEAA 76

Query: 151 KQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            ++       I E DA  LPF     DR +S   + + P+  R + E  RV++ GG
Sbjct: 77  NRRNTDPRISIREADACALPFEDSSFDRAISMLMLHFVPEAGRAVAEMRRVVRPGG 132


>gi|407641249|ref|YP_006805008.1| hypothetical protein O3I_000355 [Nocardia brasiliensis ATCC 700358]
 gi|407304133|gb|AFT98033.1| hypothetical protein O3I_000355 [Nocardia brasiliensis ATCC 700358]
          Length = 272

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK---AKQKEP 155
           D ALE A L+  +  V+DV  GTG  +L     V    V  +D S   LA+   A +   
Sbjct: 32  DRALEFASLTPASQ-VIDVAAGTGLLSLLAAPQV--ARVHAIDFSEPMLARLSTAARAAG 88

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII--GP 213
           L   +   GD +DLP+  D  D   S   + ++P+  +G  E +RVL+ GG A +    P
Sbjct: 89  LTNIETRVGDGQDLPYENDRFDAGFSMFGLMFFPERAKGFGELFRVLRPGGTAVVSSWAP 148

Query: 214 VYPTFWLSRYFADVWMLFPKEEE----YIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIM 269
           V  +  +   F  +    P  +E    Y+   +     + +++R G +    ++RH   +
Sbjct: 149 VVESPLMRLMFGAIAAADPSVQEPQPNYLS-LENPEIFETEMRRAGFEAV-SIQRHSTAL 206

Query: 270 GCS 272
            C+
Sbjct: 207 ACA 209


>gi|451981932|ref|ZP_21930269.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Nitrospina gracilis 3/211]
 gi|451760872|emb|CCQ91541.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Nitrospina gracilis 3/211]
          Length = 243

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 32/170 (18%)

Query: 115 VDVGGGTGFTTLGIVKH--VDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           +D+  GTG   L   +H     + V  LD S   LA+A +K   +        V G AE 
Sbjct: 58  LDIACGTGDVALEYFEHPAESPRQVVALDFSEAMLARAGRKFEARNRANALPRVCGAAEA 117

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG---PVYPTF------W 219
           LPFP +  D    A  +  + D ++G+RE  RVL+ GG+A I+    P  P        +
Sbjct: 118 LPFPNNSFDGISVAFGVRNFADREQGLREMARVLRPGGRAVILEFSLPRQPVLREPYRVY 177

Query: 220 LSRYFADV--WM---------------LFPKEEEYIEWFQKAGFKDVQLK 252
             R   +V  W+               +FP+ +E++    +AGF  V+ +
Sbjct: 178 FERVLPEVGRWVSGHPEAYTYLPQSVGVFPERDEFVFLMHRAGFNKVRFR 227


>gi|91782418|ref|YP_557624.1| methyltransferase [Burkholderia xenovorans LB400]
 gi|91686372|gb|ABE29572.1| Putative methyltransferase [Burkholderia xenovorans LB400]
          Length = 250

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 79  FLSIVYDHVINPGHWT-EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           F S    ++ +P H T  D+R   L  A  +  +  V+D+G G G  +  +  H  AK V
Sbjct: 11  FGSTAAAYLTSPTHATGADLR--TLAEAIAATPDATVLDMGCGAGHASFAVAPH--AKAV 66

Query: 138 TILDQSPHQLAK---AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRG 194
              D +P  LA    A ++  L   +  +G AE LPF     D  +S  S  +W D    
Sbjct: 67  VAYDIAPQMLATVEGAAKERGLANIRTQQGAAEVLPFADHSFDWVISRMSAHHWHDVPLA 126

Query: 195 IREAYRVLKLGGKACII 211
           + E  RVLK GGK   I
Sbjct: 127 LAEVRRVLKPGGKVLFI 143


>gi|385203459|ref|ZP_10030329.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Burkholderia sp. Ch1-1]
 gi|385183350|gb|EIF32624.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Burkholderia sp. Ch1-1]
          Length = 250

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK---AKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +  +  H  AK V   D +P  LA    A ++  L   +  +G AE LP
Sbjct: 45  VLDMGCGAGHASFAVAPH--AKEVVAYDIAPQMLATVEGAAKERGLANIRTQQGAAEVLP 102

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYFADV 227
           F     D  +S  S  +W D    + E  RVLK GGK   I   G  +P   L  +   +
Sbjct: 103 FSDHSFDWVISRMSAHHWHDVPLALAEVRRVLKPGGKVLFIDIAGSDHPL--LDTHIQAI 160

Query: 228 WMLFP-------KEEEYIEWFQKAGFK 247
            +L         + +E++  F  AGFK
Sbjct: 161 ELLRDASHIRDYRADEWLALFAAAGFK 187


>gi|94969275|ref|YP_591323.1| demethylmenaquinone methyltransferase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551325|gb|ABF41249.1| demethylmenaquinone methyltransferase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 250

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 29/168 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN--VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
           V+D+  GTG  T  + +H  A+   +T  D SP  L +A+ K   K  + VE DA  +PF
Sbjct: 71  VLDLCCGTGDMTFALYRHASAQKPKMTGADFSPAMLERARVKGAGKPIEWVEADALHMPF 130

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---------GPVYPTFWLSR 222
             +  D   SA       +   G+RE YRVL+  G+  I+         G +Y  F+   
Sbjct: 131 ADESFDLVTSAFGFRNLANYNAGLREIYRVLRPNGEIGILDFSEPKGAFGHLY-RFYFKN 189

Query: 223 YFADVWML-----------------FPKEEEYIEWFQKAGFKDVQLKR 253
               +  +                 FP+ EE +E  +  GF++V   R
Sbjct: 190 ILPKIGTMISGVKGPYAYLPASVERFPEPEEMLERMKAVGFREVSWTR 237


>gi|302873193|ref|YP_003841826.1| type 11 methyltransferase [Clostridium cellulovorans 743B]
 gi|307688642|ref|ZP_07631088.1| Methyltransferase type 11 [Clostridium cellulovorans 743B]
 gi|302576050|gb|ADL50062.1| Methyltransferase type 11 [Clostridium cellulovorans 743B]
          Length = 253

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 13/146 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           ++D+G GTG+    + K      +  LD   + L    +K   E L     VE +  ++P
Sbjct: 49  LMDLGTGTGYIAFTLAKENPNLQIVGLDIVTNALKANTEKAVKEQLDNITFVEYNGMNIP 108

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F  +  D  V+  ++ ++ + ++  +E YRVLK GG+  I  P  P       F D +M 
Sbjct: 109 FQDNTFDCIVTRYAMHHFTEIEKSFKEIYRVLKPGGQLFISDPT-PNERDENRFVDDFMK 167

Query: 231 FPKEEEYIEWFQK---------AGFK 247
             K++ +I++++K         AGFK
Sbjct: 168 LSKDDGHIQFYKKEELETMASTAGFK 193


>gi|257062902|ref|YP_003142574.1| ubiquinone/menaquinone biosynthesis methyltransferase [Slackia
           heliotrinireducens DSM 20476]
 gi|256790555|gb|ACV21225.1| ubiquinone/menaquinone biosynthesis methyltransferase [Slackia
           heliotrinireducens DSM 20476]
          Length = 250

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 32/183 (17%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           ++ A+L+  + L+ D+ GGTG  +    +     +V + D  P  LA AK++  + E   
Sbjct: 56  VDAANLAAESDLL-DLAGGTGDVSYMAAQRRKPAHVQLTDFVPEMLAVAKKRYQMGENNG 114

Query: 162 VEGD-----AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIGPVY 215
           V  D     A+D+P+     D    A  I   PD  + + E +RVLK  G  AC+     
Sbjct: 115 VPFDFEVVDAQDVPYDDCSYDAVTMAYGIRNIPDRMKALSEVHRVLKPSGTFACLEFSTP 174

Query: 216 PT----------------FW---LSR------YFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           P                 FW    ++      Y AD    FP +EEY +  + AGFKDV 
Sbjct: 175 PNPVWRGLYHIYLKVMIPFWGWLFTKDRPSFVYLADSIRAFPPQEEYAQMLRDAGFKDVT 234

Query: 251 LKR 253
            K 
Sbjct: 235 WKN 237


>gi|440808169|gb|AGC24260.1| PrlF [Nonomuraea spiralis]
          Length = 278

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 114 VVDVGGGTGFTTLGIVKH--VDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLP 170
           V+DVG G G   L + +   VD   V+I +Q     A + +  P+  +      DA DLP
Sbjct: 65  VLDVGCGIGKPALRLAQERKVDVVGVSISEQQIEIAAASARAVPVPTQVSFRTADAMDLP 124

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-------PVYPTFWLSRY 223
           FP    D  +S   + +  D  R +RE  RV++ GG   I         P      + R+
Sbjct: 125 FPDSSFDAVLSLEVLHHVADRARALREIARVVRPGGSVVIADFALRAPVPEEHRELVDRF 184

Query: 224 FADVWMLFPKE-EEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGD 282
            A   ++   E +EY+  F  AG + V++  +       +R+H   M  +   + P  G 
Sbjct: 185 AAACNLVTLTEIDEYVAEFTGAGLELVEVTDVSEHVRPSMRQHAEAMVAARDRLGPVVGA 244

Query: 283 SPLQVTI 289
             L + +
Sbjct: 245 GNLDLMV 251


>gi|350559948|ref|ZP_08928788.1| Methyltransferase type 11 [Thioalkalivibrio thiocyanoxidans ARh 4]
 gi|349782216|gb|EGZ36499.1| Methyltransferase type 11 [Thioalkalivibrio thiocyanoxidans ARh 4]
          Length = 409

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 26/168 (15%)

Query: 109 NRNMLVVDVGGGTGFTTL------GIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV 162
            R   V+DVG G G  TL      G   HV A ++T       +L  A  +       ++
Sbjct: 74  QRGDTVLDVGAGAGVDTLIAGQLAGPDGHVVALDLTT--AMTRKLRHAASESGGAPVSVI 131

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-----ACIIGPVY-- 215
            G AE LP      D   S G++   PD +R I E +RVL+ GG+       I  PV   
Sbjct: 132 RGSAEALPLADASVDSITSNGALNLVPDKRRAIGEMFRVLRPGGRLQLADVVIDRPVTVD 191

Query: 216 ----PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259
               P  W+     +  +    +E+ +  F+ AGF+D+++  +G + Y
Sbjct: 192 CAEDPRLWV-----ECVVGATVDEDLLHMFRDAGFEDIRV--VGSRDY 232


>gi|323499684|ref|ZP_08104652.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           sinaloensis DSM 21326]
 gi|323315285|gb|EGA68328.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           sinaloensis DSM 21326]
          Length = 260

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           V+D+GGGTG  T    + V  K   IL   + S   + + K ++   +     V+ +AE+
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGEKGHVILADINNSMLNVGRDKLRDSGIVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR-YFAD 226
           LPFP DY D    +  +    D  + +R  YRVLK GG+  ++    P    LS+ Y A 
Sbjct: 136 LPFPDDYFDAITISFCLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPILEPLSKIYDAY 195

Query: 227 VWMLFPKEEEYI 238
            + L PK  E +
Sbjct: 196 SFHLLPKMGELV 207


>gi|269837984|ref|YP_003320212.1| methyltransferase type 11 [Sphaerobacter thermophilus DSM 20745]
 gi|269787247|gb|ACZ39390.1| Methyltransferase type 11 [Sphaerobacter thermophilus DSM 20745]
          Length = 265

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)

Query: 86  HVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH 145
           +V++P H + D  +  +E A+ +    + +D+  G G T L +  HV  ++VT  D  P 
Sbjct: 25  YVVSPTHRSGDDLERLVELAE-ATPETIALDIATGGGHTALALAPHV--RHVTATDLVPE 81

Query: 146 QLAKAK---QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
            L +A+     + +        DAEDLPF     D      +  ++ D QR + E  RVL
Sbjct: 82  MLERARAFITSQGVINADFQVADAEDLPFADGSFDLVTCRIAPHHFADVQRAVHEVARVL 141

Query: 203 KLGGKACIIGPVYP 216
           + GG   +I  V P
Sbjct: 142 RPGGLFLLIDSVAP 155


>gi|254470954|ref|ZP_05084357.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Pseudovibrio sp. JE062]
 gi|211960096|gb|EEA95293.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Pseudovibrio sp. JE062]
          Length = 267

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 31/169 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL 169
           +DV GGTG     +V+  +     T+ D +   L   K +       +  + ++G+AE+L
Sbjct: 84  LDVAGGTGDIATRVVERSNRTIKSTVCDINGSMLGVGKDRANAAGLAENIEFIQGNAEEL 143

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGPVYPTFW 219
           PFP  + D Y  A  I   P   + + EA+RVLK GG+  C+         +  VY  F 
Sbjct: 144 PFPDKHFDAYTIAFGIRNVPQIDKALSEAFRVLKRGGRFMCLEFSQVDVPALDKVYDLFS 203

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
                              Y  +    FP +E + +  + AGF+ V  +
Sbjct: 204 FHAIPKIGQVVTGDGDPYSYLVESIRKFPNQERFAQMIRDAGFERVTYR 252


>gi|144900193|emb|CAM77057.1| SAM-dependent methyltransferases [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 327

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DVG G G  +  + K+     V  ++ SP QLAKA+  EP+   +IV+G  ++LP   
Sbjct: 121 VIDVGCGDGHLSRLLAKN--GAQVLGVECSPRQLAKARAAEPMAGVEIVDGVGQNLPADD 178

Query: 174 DYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPV 214
           + AD  V   S+ + P    Q  + EA RVLK GG   +  P+
Sbjct: 179 ESADIVVFFNSLHHVPADFMQAALAEARRVLKPGGLVYVSEPI 221


>gi|254436747|ref|ZP_05050241.1| ubiquinone/menaquinone biosynthesis methyltransferases subfamily
           [Octadecabacter antarcticus 307]
 gi|198252193|gb|EDY76507.1| ubiquinone/menaquinone biosynthesis methyltransferases subfamily
           [Octadecabacter antarcticus 307]
          Length = 248

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG      +K     + T+LD +   L + +++    + +     + GDA  L
Sbjct: 65  LLDVAGGTGDVAFRFLKRAKIGHATVLDLTEPMLIEGRKRADAAQLESSLDWIVGDAMAL 124

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PF  +  D Y  +  I     PQ  +REAYRVLK GG+  ++
Sbjct: 125 PFEDNTFDVYTISFGIRNVTRPQDALREAYRVLKPGGRLMVL 166


>gi|90412766|ref|ZP_01220767.1| putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Photobacterium profundum 3TCK]
 gi|90326341|gb|EAS42760.1| putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Photobacterium profundum 3TCK]
          Length = 251

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEG 164
           R   V+D+GGGTG  T    + V  +   IL   + S  ++ ++K ++   +     V+ 
Sbjct: 63  RGNRVLDLGGGTGDLTAKFSRIVGDEGQVILADINNSMLKVGRSKLRDSGIVGNVGYVQA 122

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR- 222
           +AE+LPFP DY D    +  +    D ++ +R  YRVLK GG+  ++    P    LS+ 
Sbjct: 123 NAEELPFPDDYFDCITISFCLRNVTDKEKALRSMYRVLKPGGRLLVLEFSKPIVEPLSKV 182

Query: 223 YFADVWMLFPKEEEYI 238
           Y A  + L PK  E I
Sbjct: 183 YDAYSFHLLPKMGELI 198


>gi|407984586|ref|ZP_11165197.1| methyltransferase domain protein [Mycobacterium hassiacum DSM
           44199]
 gi|407373808|gb|EKF22813.1| methyltransferase domain protein [Mycobacterium hassiacum DSM
           44199]
          Length = 198

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 27/170 (15%)

Query: 68  QHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLG 127
           QH +EA WF R                       L   DLS R++L  +VG G G  +  
Sbjct: 20  QHHREAAWFRR-----------------------LARGDLSGRHVL--EVGCGRGVGSKV 54

Query: 128 IVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187
           I+  + A  VT  D     +  A+++   +   +  GD  ++  P+   D  V  G I +
Sbjct: 55  ILDRLGASRVTAFDLDESMVELARRRLHGRPVTLSVGDVCEIEQPSASVDAVVDFGIIHH 114

Query: 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237
            PD Q+ +RE  RVLK GG   ++    P   L  +    + + P++  +
Sbjct: 115 VPDWQQAVREIARVLKPGG--LLLFEELPAHVLDTWVFRTFTVHPRDNRF 162


>gi|268610816|ref|ZP_06144543.1| putative methyltransferase type 11 [Ruminococcus flavefaciens FD-1]
          Length = 214

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D G GTG     + +    K+ T +D +P  +  AK+K  LK  ++V GD E+LPF  
Sbjct: 51  LLDCGCGTGPMLTLLHEKYPEKHYTGIDLTPKMIEVAKRK-ALKNVELVVGDCENLPFEA 109

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           +  D  +   S  ++P+PQ       RVL+ GG+
Sbjct: 110 NSFDVVICCESFHHYPNPQDFFNSVSRVLRPGGR 143


>gi|423316611|ref|ZP_17294516.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bergeyella
           zoohelcum ATCC 43767]
 gi|405583661|gb|EKB57601.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bergeyella
           zoohelcum ATCC 43767]
          Length = 248

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 30/170 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           V+DV  GTG   + I K  DA+ +T  D S   L     K K+     + K+++GDAE +
Sbjct: 68  VLDVATGTGDLAIAIQKGTDAE-ITGYDLSQQMLNVGVDKIKKLNLDGKIKMIKGDAEHM 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK---------LGGKACIIGPVYPTFWL 220
           PF  D  D   +A  +  + + ++G+ E  RV+K               I+GP+Y  ++ 
Sbjct: 127 PFENDQFDAVTAAFGVRNFENLEKGLSEMRRVVKPNKSVYILEFSKVEGILGPLYMFYFK 186

Query: 221 S----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +                 Y  D    FP  E+        GFK+V++K++
Sbjct: 187 NILPLIGRLVSKDNRAYTYLPDSVNAFPYGEKMKNILLSVGFKEVKMKKL 236


>gi|417324123|ref|ZP_12110458.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Adelaide str. A4-669]
 gi|353579789|gb|EHC41244.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Adelaide str. A4-669]
          Length = 256

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|423488674|ref|ZP_17465356.1| hypothetical protein IEU_03297 [Bacillus cereus BtB2-4]
 gi|423494399|ref|ZP_17471043.1| hypothetical protein IEW_03297 [Bacillus cereus CER057]
 gi|423498811|ref|ZP_17475428.1| hypothetical protein IEY_02038 [Bacillus cereus CER074]
 gi|401152013|gb|EJQ59454.1| hypothetical protein IEW_03297 [Bacillus cereus CER057]
 gi|401158893|gb|EJQ66282.1| hypothetical protein IEY_02038 [Bacillus cereus CER074]
 gi|402433681|gb|EJV65731.1| hypothetical protein IEU_03297 [Bacillus cereus BtB2-4]
          Length = 239

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 9/145 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           V+++G GTG T   + K    K VT ++++   + KAK +   +   I  ++GDAE LP 
Sbjct: 41  VLEIGCGTGKTAAYMTKEFGYK-VTAIEKNEIMIQKAKDRWLFERLNIQLIQGDAERLPC 99

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231
             D +  +V   SI  + D +R I E YRVL+  GK  +I  +  T         +  L+
Sbjct: 100 LND-SFEFVLGESILAFTDKERVISECYRVLQKDGKLVVIEMIINTHIEKSEEEKIAQLY 158

Query: 232 P-----KEEEYIEWFQKAGFKDVQL 251
                  E E+I  FQ A FK + +
Sbjct: 159 GMKELLTENEWIHLFQVANFKRITI 183


>gi|429123524|ref|ZP_19184057.1| type 11 methyltransferase [Brachyspira hampsonii 30446]
 gi|426280597|gb|EKV57608.1| type 11 methyltransferase [Brachyspira hampsonii 30446]
          Length = 206

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD 165
           D+   N+L  D+G GTG+  + ++K+ +  +   LD S   L  AK K  +K    + G 
Sbjct: 44  DIDYNNLL--DIGCGTGYL-INLLKNKNNASFYGLDLSEEMLKIAKSKN-IKNSHFILGT 99

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           A+ LPF  +  D  V   S  ++P P   ++EAYR+L+ GG
Sbjct: 100 ADKLPFDDNTFDIAVCIQSFHHYPYPDEAMKEAYRILRKGG 140


>gi|330444915|ref|ZP_08308570.1| 2-OCTAPRENYL-METHOXY-BENZOQ-METH bifunctional
           2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and
           S-adenosylmethionine:2-DMK methyltransferase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489225|dbj|GAA03067.1| 2-OCTAPRENYL-METHOXY-BENZOQ-METH bifunctional
           2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and
           S-adenosylmethionine:2-DMK methyltransferase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 251

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           V+D+GGGTG  T    + V      IL   + S  ++ ++K ++   +     V+ +AE+
Sbjct: 67  VLDLGGGTGDLTAKFSRIVGETGQVILADINNSMLKVGRSKLRDSGIVGNVGYVQANAEE 126

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR-YFAD 226
           LPFP DY D    +  +    D ++ +R  YRVLK GG+  ++    P    LS+ Y A 
Sbjct: 127 LPFPDDYFDCITISFCLRNVTDKEKALRSMYRVLKPGGRLLVLEFSKPILEPLSKVYDAY 186

Query: 227 VWMLFPKEEEYI 238
            + L PK  E I
Sbjct: 187 SFHLLPKMGEII 198


>gi|310816814|ref|YP_003964778.1| ubiquinone biosynthesis methyltransferase Coq5 [Ketogulonicigenium
           vulgare Y25]
 gi|385234412|ref|YP_005795754.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Ketogulonicigenium vulgare WSH-001]
 gi|308755549|gb|ADO43478.1| ubiquinone biosynthesis methyltransferase Coq5, precursor
           [Ketogulonicigenium vulgare Y25]
 gi|343463323|gb|AEM41758.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Ketogulonicigenium vulgare WSH-001]
          Length = 250

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG  +   ++     + T+LD +   L   +Q+   ++       V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLRRAGGAHATVLDLTEPMLIAGRQRAEAEDMAAQLDWVVGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PFP +  D Y  +  I     P+  + EAYRVL+ GG+  ++
Sbjct: 127 PFPDNSFDVYTISFGIRNVTRPEVALAEAYRVLRPGGRLMVL 168


>gi|294673060|ref|YP_003573676.1| UbiE/COQ5 family methyltransferase [Prevotella ruminicola 23]
 gi|294472770|gb|ADE82159.1| methyltransferase, UbiE/COQ5 family [Prevotella ruminicola 23]
          Length = 203

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPL-KECKIVEGDAEDLP 170
           ++DVG G GFT   ++K      V  +D S   + KA+Q   E L K+  + +G AE LP
Sbjct: 49  MLDVGCGGGFTIRRLLKRSKDAQVYGIDISEESVTKARQVNAEVLDKQVYVTQGSAEQLP 108

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214
           +  +  D   +  ++ +WP+    ++E  RVLK GGK  I+  V
Sbjct: 109 YNDEMFDLVTAVETVYFWPNLPDCLQEVRRVLKPGGKFAIMVEV 152


>gi|168819169|ref|ZP_02831169.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|374999992|ref|ZP_09724332.1| methyltransferase domain protein [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
 gi|409248680|ref|YP_006884520.1| Uncharacterized protein yafE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|205344262|gb|EDZ31026.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320084508|emb|CBY94300.1| Uncharacterized protein yafE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|353074680|gb|EHB40440.1| methyltransferase domain protein [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
          Length = 256

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|113474848|ref|YP_720909.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110165896|gb|ABG50436.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 272

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+  G G+      K     NV  LD S   L KAKQ  P  + + ++G AE LPF  
Sbjct: 50  ILDIATGPGYVATDAAKR--ECNVIGLDFSDGMLNKAKQLNP--DLEFIQGGAEFLPFEN 105

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           +  D  V    I +  +PQ+ I EA+RVL+  GK
Sbjct: 106 EEFDAVVMNFGILHLAEPQKAINEAFRVLRYAGK 139


>gi|338534222|ref|YP_004667556.1| UbiE/COQ5 family methyltransferase [Myxococcus fulvus HW-1]
 gi|337260318|gb|AEI66478.1| UbiE/COQ5 family methyltransferase [Myxococcus fulvus HW-1]
          Length = 269

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 95  EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA--KAKQ 152
           E    DAL  A +++    VVDV  G G  TL ++   +   VT +D S   +A  +A+ 
Sbjct: 29  ETFSRDALLRAGVAS-GTRVVDVAAGPG--TLALLAAREGARVTAVDFSAEMIAALRARA 85

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            E   +   +EGD   LPF     D   S   + ++PD  RG +E +RVL+ GG+A +
Sbjct: 86  TEARLDIDALEGDGMALPFEDGAFDAAFSMFGLIFFPDRARGFQELHRVLRPGGRAVV 143


>gi|421882980|ref|ZP_16314227.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Senftenberg str. SS209]
 gi|379987402|emb|CCF86500.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Senftenberg str. SS209]
          Length = 256

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|238650996|ref|YP_002916852.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           peacockii str. Rustic]
 gi|259550988|sp|C4K2K3.1|UBIE_RICPU RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|238625094|gb|ACR47800.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rickettsia
           peacockii str. Rustic]
          Length = 248

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 34/180 (18%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVK----HVDAKNVTILDQSPHQLAKAKQK----EPLKECK 160
           N N  ++DV  G+G   L + K     V+  ++T+ D +   L +AK+K       +  K
Sbjct: 56  NLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLK 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK-LGGKACI--------- 210
                AE+LPF  D  D Y  A  I   PD  + ++EA RVLK +G   C+         
Sbjct: 116 FTVASAEELPFLDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGY 175

Query: 211 IGPVYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +   Y  +  +                 Y  +   LFP ++E+    + AGF++V  K +
Sbjct: 176 MKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNL 235


>gi|217976311|ref|YP_002360458.1| hypothetical protein Msil_0114 [Methylocella silvestris BL2]
 gi|217501687|gb|ACK49096.1| Methyltransferase type 11 [Methylocella silvestris BL2]
          Length = 268

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFP 172
           VVDV  GTGF  + + K   A  +  +D+S   L  A+ + + L   + ++ +A+ LP  
Sbjct: 51  VVDVACGTGFDVIEMAKRFPAAEIFGVDRSEGLLGAARSRAQGLGNVRFLQANADRLPLQ 110

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-------SRYFA 225
           TD  D      ++++  DP+  +RE  RV + GG+     P + TF L       S   +
Sbjct: 111 TDAFDGARIDRALQHIEDPRASLREMVRVTRPGGRIVAAEPDWGTFVLYNGAGAASAKMS 170

Query: 226 DVWM 229
           +VW+
Sbjct: 171 EVWL 174


>gi|56414621|ref|YP_151696.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|168232190|ref|ZP_02657248.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194468511|ref|ZP_03074495.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197363549|ref|YP_002143186.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|418845958|ref|ZP_13400735.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Newport str. CVM 19443]
 gi|56128878|gb|AAV78384.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194454875|gb|EDX43714.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197095026|emb|CAR60572.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|205333386|gb|EDZ20150.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|392811960|gb|EJA67958.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Newport str. CVM 19443]
          Length = 256

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|421487095|ref|ZP_15934622.1| methyltransferase [Achromobacter piechaudii HLE]
 gi|400194624|gb|EJO27633.1| methyltransferase [Achromobacter piechaudii HLE]
          Length = 256

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +  +   V  ++VT  D S   L   A    K  L      +G AE LP
Sbjct: 48  VLDLGCGGGPVSFHVAPEV--RHVTAYDLSQQMLDVVAAEAAKRGLANLVTCQGKAEYLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  RG+REA+RVLK GG A     V P
Sbjct: 106 FADGEFDLVMSRYSTHHWQDAGRGLREAFRVLKPGGIAVFADVVSP 151


>gi|418636102|ref|ZP_13198455.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus lugdunensis VCU139]
 gi|374841200|gb|EHS04678.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Staphylococcus lugdunensis VCU139]
          Length = 241

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAE 167
           ++ + +DV  GT   T+ + K V     VT LD S + L   K+K   +    +V GDA 
Sbjct: 49  KDSVALDVCCGTADWTIALSKAVGPNGEVTGLDFSENMLKVGKEKTSAMDNVHLVHGDAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---- 222
            LPF  D  D YV+ G  +   PD    ++E +RVLK GG    +    PT  + +    
Sbjct: 109 HLPFEDDSFD-YVTIGFGLRNVPDYLGALKEMHRVLKPGGMVVCLETSQPTMPVFKQVYK 167

Query: 223 -YFADVW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
            YF  V      LF K +E  EW Q++ F      +LKR+
Sbjct: 168 LYFRFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKEKLKRL 207


>gi|344234721|gb|EGV66589.1| hypothetical protein CANTEDRAFT_100531 [Candida tenuis ATCC 10573]
          Length = 292

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 45/190 (23%)

Query: 99  DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQLAK--- 149
           D  + P   S R +  +DV GGTG    G+++H + +       +T+ D +P  L +   
Sbjct: 83  DAGMRPG--SGRPLDFLDVAGGTGDIAFGLLEHAEKRFNDFQSTMTVADINPDMLKEGEK 140

Query: 150 -------AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
                  AK+ +P     +  G+  D     +  D Y  A  I  + + Q+G+ +AYRVL
Sbjct: 141 RYQDTKWAKEADPRVSFLVQNGETLD-KIADNSKDVYTIAFGIRNFTNIQKGLEQAYRVL 199

Query: 203 KLGGK-AC---------IIGPVYPTFWLS----------------RYFADVWMLFPKEEE 236
           + GG  AC         ++  VY T+  S                +Y  +    FPK+EE
Sbjct: 200 RPGGIFACLEFSQVENQLLDYVYQTYSFSLIPLAGQLIADDRESYQYLVESIRRFPKKEE 259

Query: 237 YIEWFQKAGF 246
           +    +KAGF
Sbjct: 260 FKGMIEKAGF 269


>gi|238913721|ref|ZP_04657558.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|416526471|ref|ZP_11742376.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. LQC 10]
 gi|416536322|ref|ZP_11748389.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB30]
 gi|416553713|ref|ZP_11757842.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 29N]
 gi|416568032|ref|ZP_11764471.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 4441 H]
 gi|417346430|ref|ZP_12126284.1| SAM-dependent methyltransferase YafE [Salmonella enterica subsp.
           enterica serovar Gaminara str. A4-567]
 gi|417449861|ref|ZP_12162817.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. S5-403]
 gi|418514139|ref|ZP_13080350.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Pomona str. ATCC 10729]
 gi|353579797|gb|EHC41250.1| SAM-dependent methyltransferase YafE [Salmonella enterica subsp.
           enterica serovar Gaminara str. A4-567]
 gi|353637260|gb|EHC83122.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. S5-403]
 gi|363557523|gb|EHL41728.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. LQC 10]
 gi|363562357|gb|EHL46456.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 29N]
 gi|363565428|gb|EHL49464.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB30]
 gi|363578134|gb|EHL61950.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 4441 H]
 gi|366079959|gb|EHN43940.1| methyltransferase, UbiE/COQ5 family protein [Salmonella enterica
           subsp. enterica serovar Pomona str. ATCC 10729]
          Length = 256

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|114331425|ref|YP_747647.1| UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD
           [Nitrosomonas eutropha C91]
 gi|114308439|gb|ABI59682.1| demethylmenaquinone methyltransferase /
           2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
           [Nitrosomonas eutropha C91]
          Length = 243

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 28/165 (16%)

Query: 114 VVDVGGGTG-FTTLGIVKHVDAKNV--TILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           V+D+ GGT   T L   K  DA  V  T ++ S   + + +     K   + + DAE LP
Sbjct: 62  VLDIAGGTADLTALFREKVGDAGEVWLTDINNSMLSIGRDRMLNDGKSVPVAQCDAEKLP 121

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI---------IGPVYPTFWLS 221
           FP +Y DR   A  +         +RE +RVL  GG   +         + P+Y T+   
Sbjct: 122 FPDNYFDRVCVAFGLRNMTHKDIALREMWRVLSPGGSLIVLEFSKVWKPLQPLYDTYSFK 181

Query: 222 ----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
                           RY A+   + P +E+  +  Q+ GF+ V+
Sbjct: 182 ALPFMGKIVTRDDASYRYLAESIRMHPSQEDLKQLMQQVGFERVE 226


>gi|410897329|ref|XP_003962151.1| PREDICTED: putative methyltransferase DDB_G0268948-like [Takifugu
           rubripes]
          Length = 270

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP 170
           ++LVVD+G GTG  +  +  H   + V  +D S  QL +A+           EG AE+LP
Sbjct: 41  HVLVVDLGCGTGQLSRVLAPHF--QEVVGIDVSESQLEQARAVPGYPNITYREGSAEELP 98

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL 220
            P    D  ++A S  +W D  R + EA RVLK+GG   ++      F L
Sbjct: 99  VPDGSVD-LLTASSAAHWFDQSRFLAEANRVLKVGGCIALLDYSLSNFRL 147


>gi|315658246|ref|ZP_07911118.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus lugdunensis M23590]
 gi|315496575|gb|EFU84898.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Staphylococcus lugdunensis M23590]
          Length = 245

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAE 167
           ++ + +DV  GT   T+ + K V     VT LD S + L   K+K   +    +V GDA 
Sbjct: 49  KDSVALDVCCGTADWTIALSKAVGPNGEVTGLDFSENMLKVGKEKTSAMDNVHLVHGDAM 108

Query: 168 DLPFPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---- 222
            LPF  D  D YV+ G  +   PD    ++E +RVLK GG    +    PT  + +    
Sbjct: 109 HLPFEDDSFD-YVTIGFGLRNVPDYLGALKEMHRVLKPGGMVVCLETSQPTMPVFKQVYK 167

Query: 223 -YFADVW----MLFPKEEEYIEWFQKAGFK---DVQLKRI 254
            YF  V      LF K +E  EW Q++ F      +LKR+
Sbjct: 168 LYFRFVMPIFGKLFAKSKEEYEWLQQSTFNFPDKEKLKRL 207


>gi|186682813|ref|YP_001866009.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186465265|gb|ACC81066.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 207

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 9/111 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+  G+G TT  +VK   ++NVT LD SP  L +A+   P  E   VE  AE++PF  
Sbjct: 49  VLDLCCGSGQTTQFLVKI--SQNVTGLDASPKSLQRARLNVP--EASYVEAFAEEMPFTD 104

Query: 174 DYADR-YVSAGSIEYWPDPQRGI-REAYRVLKLGGKACII---GPVYPTFW 219
           +  D  ++S    E  P   R I  E YRVLK GG   ++    P  P  W
Sbjct: 105 NLFDVVHISVALHEMQPQQLRKIIDEVYRVLKPGGIFTLVDFHAPTNPILW 155


>gi|170733767|ref|YP_001765714.1| type 11 methyltransferase [Burkholderia cenocepacia MC0-3]
 gi|169817009|gb|ACA91592.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
          Length = 250

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           +  V+D+G G G  +  +  HV  ++V   D +   LA    A ++  L   +  +G AE
Sbjct: 42  DAAVLDLGCGAGHASFAVAPHV--RDVVAYDLAAPMLATVEAAARERGLANVRTQQGPAE 99

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYF 224
            LPF T   D  VS  S  +W D +  + E  RVLK GG+  +I   G  +P   L  Y 
Sbjct: 100 RLPFDTATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNDHPL--LDTYL 157

Query: 225 ADVWMLFP-------KEEEYIEWFQKAGFKDVQL 251
               +L         + +E++  F++AGF D Q+
Sbjct: 158 QAAEVLRDASHVRDYRADEWLAMFREAGF-DAQV 190


>gi|448583084|ref|ZP_21646553.1| methyl transferase-like protein [Haloferax gibbonsii ATCC 33959]
 gi|445730041|gb|ELZ81633.1| methyl transferase-like protein [Haloferax gibbonsii ATCC 33959]
          Length = 213

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 27/195 (13%)

Query: 69  HKKEAFWFYRFLSIVYDHVI---NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           H      F+   + VYD V+   +PG         AL+ AD       VVD+GGG+G  T
Sbjct: 22  HGAGDVRFFDRFAPVYDLVMPPADPGALGT-----ALDRADRPIER--VVDIGGGSGRAT 74

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185
           L +    D     +LD+S   L +A+++        V GDA  LPF  D  D      + 
Sbjct: 75  LAL----DVPERIVLDRSAGMLRRARERG----LDCVRGDARGLPFADDSLDAVTVVDAF 126

Query: 186 EYWPDPQRGI-REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML------FPKEEEYI 238
            + P+ QRG+  E +RVL  GG    +    P   L R       +      F   +E +
Sbjct: 127 HHMPN-QRGVAEEVFRVLAPGG-VFAVNEFDPETLLGRGLVAAERVVGFGSAFAAPDELV 184

Query: 239 EWFQKAGFKDVQLKR 253
            + ++ GF+   ++R
Sbjct: 185 RFLERVGFEADVVER 199


>gi|21228321|ref|NP_634243.1| hypothetical protein MM_2219 [Methanosarcina mazei Go1]
 gi|452210752|ref|YP_007490866.1| hypothetical protein MmTuc01_2276 [Methanosarcina mazei Tuc01]
 gi|20906786|gb|AAM31915.1| hypothetical protein MM_2219 [Methanosarcina mazei Go1]
 gi|452100654|gb|AGF97594.1| hypothetical protein MmTuc01_2276 [Methanosarcina mazei Tuc01]
          Length = 195

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           ++D+G G GF    I+  ++ K++T +D S   L  AKQK P   C    G   DL F  
Sbjct: 44  IIDIGCGEGF----IINCLNRKDITGVDVSKKALNIAKQKNP--GCNFCTGSIYDLSFKK 97

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-PVYPTF 218
              D  ++   +E+  +P+R +RE  R+ K   K CI   P  P F
Sbjct: 98  SSFDLVIATEVLEHLENPERALREIKRISK---KYCIFSVPNEPYF 140


>gi|421357936|ref|ZP_15808244.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 622731-39]
 gi|421365074|ref|ZP_15815296.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639016-6]
 gi|421369155|ref|ZP_15819339.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 640631]
 gi|421372600|ref|ZP_15822749.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-0424]
 gi|421376212|ref|ZP_15826321.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-6]
 gi|421380783|ref|ZP_15830845.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 485549-17]
 gi|421384148|ref|ZP_15834177.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-22]
 gi|421392647|ref|ZP_15842604.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-70]
 gi|421395836|ref|ZP_15845768.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-26]
 gi|421398496|ref|ZP_15848401.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-37]
 gi|421405323|ref|ZP_15855158.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-46]
 gi|421407923|ref|ZP_15857730.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-50]
 gi|421414003|ref|ZP_15863749.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-1427]
 gi|421419611|ref|ZP_15869303.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-2659]
 gi|421423713|ref|ZP_15873364.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 78-1757]
 gi|421425466|ref|ZP_15875101.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22510-1]
 gi|421429814|ref|ZP_15879408.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 8b-1]
 gi|421435145|ref|ZP_15884686.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648905 5-18]
 gi|421440912|ref|ZP_15890387.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 6-18]
 gi|421445689|ref|ZP_15895110.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-3079]
 gi|436618855|ref|ZP_20514504.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22704]
 gi|436810429|ref|ZP_20529467.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1882]
 gi|436813824|ref|ZP_20532012.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1884]
 gi|436831548|ref|ZP_20536216.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1594]
 gi|436849614|ref|ZP_20540751.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1566]
 gi|436856026|ref|ZP_20545131.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1580]
 gi|436863013|ref|ZP_20549556.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1543]
 gi|436871487|ref|ZP_20554661.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1441]
 gi|436878638|ref|ZP_20559057.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1810]
 gi|436886753|ref|ZP_20563159.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1558]
 gi|436894580|ref|ZP_20568058.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1018]
 gi|436904707|ref|ZP_20574724.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1010]
 gi|436909818|ref|ZP_20576403.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1729]
 gi|436918070|ref|ZP_20581241.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0895]
 gi|436925708|ref|ZP_20586140.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0899]
 gi|436934112|ref|ZP_20590116.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1457]
 gi|436941463|ref|ZP_20595023.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1747]
 gi|436949453|ref|ZP_20599467.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0968]
 gi|436959496|ref|ZP_20603693.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1444]
 gi|436975286|ref|ZP_20611562.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1445]
 gi|436987023|ref|ZP_20615667.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1559]
 gi|436999559|ref|ZP_20620132.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1565]
 gi|437009880|ref|ZP_20623860.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1808]
 gi|437018325|ref|ZP_20626817.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1811]
 gi|437035391|ref|ZP_20633317.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0956]
 gi|437046762|ref|ZP_20638578.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1455]
 gi|437049513|ref|ZP_20640133.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1575]
 gi|437056674|ref|ZP_20644042.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1725]
 gi|437065127|ref|ZP_20648812.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1745]
 gi|437079096|ref|ZP_20656590.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1791]
 gi|437082118|ref|ZP_20658193.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1795]
 gi|437090143|ref|ZP_20662715.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 576709]
 gi|437115072|ref|ZP_20669294.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 635290-58]
 gi|437122712|ref|ZP_20672554.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-16]
 gi|437132815|ref|ZP_20678265.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-19]
 gi|437137923|ref|ZP_20680718.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-2]
 gi|437149236|ref|ZP_20688109.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-9]
 gi|437151807|ref|ZP_20689478.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629163]
 gi|437169474|ref|ZP_20699794.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_N202]
 gi|437181993|ref|ZP_20706752.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_76-3618]
 gi|437248423|ref|ZP_20715012.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13183-1]
 gi|437259538|ref|ZP_20717058.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_81-2490]
 gi|437272549|ref|ZP_20724299.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL909]
 gi|437276718|ref|ZP_20726532.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL913]
 gi|437288187|ref|ZP_20730521.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_69-4941]
 gi|437309695|ref|ZP_20735623.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 638970-15]
 gi|437381083|ref|ZP_20750327.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22558]
 gi|437413066|ref|ZP_20753488.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 22-17]
 gi|437456106|ref|ZP_20760225.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 40-18]
 gi|437470175|ref|ZP_20765190.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 1-1]
 gi|437485109|ref|ZP_20769221.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 4-1]
 gi|437499217|ref|ZP_20774026.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642046 4-7]
 gi|437513698|ref|ZP_20777676.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648898 4-5]
 gi|437531225|ref|ZP_20780705.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648899 3-17]
 gi|437554580|ref|ZP_20784352.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648900 1-16]
 gi|437571525|ref|ZP_20788634.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 1-17]
 gi|437586094|ref|ZP_20793181.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 39-2]
 gi|437602535|ref|ZP_20798542.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648902 6-8]
 gi|437625877|ref|ZP_20805730.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648903 1-6]
 gi|437643071|ref|ZP_20808333.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648904 3-6]
 gi|437664555|ref|ZP_20814358.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 653049 13-19]
 gi|437675745|ref|ZP_20816813.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 8-1]
 gi|437699326|ref|ZP_20823455.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 9-7]
 gi|437710182|ref|ZP_20826287.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 42-20]
 gi|437733991|ref|ZP_20832143.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 16-16]
 gi|437786552|ref|ZP_20836867.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 76-2651]
 gi|437802326|ref|ZP_20838291.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 33944]
 gi|438064952|ref|ZP_20856862.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-5646]
 gi|438090860|ref|ZP_20860689.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 81-2625]
 gi|438114628|ref|ZP_20870244.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 53-407]
 gi|445343695|ref|ZP_21417164.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13-1]
 gi|445362399|ref|ZP_21424159.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. PT23]
 gi|395980585|gb|EJH89808.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639016-6]
 gi|395983450|gb|EJH92643.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 640631]
 gi|395990173|gb|EJH99305.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 622731-39]
 gi|396000250|gb|EJI09265.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-0424]
 gi|396003439|gb|EJI12427.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-6]
 gi|396003832|gb|EJI12819.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 485549-17]
 gi|396008208|gb|EJI17143.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-70]
 gi|396010880|gb|EJI19791.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-26]
 gi|396020710|gb|EJI29551.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-22]
 gi|396024634|gb|EJI33420.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-46]
 gi|396029855|gb|EJI38591.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-50]
 gi|396030286|gb|EJI39020.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-37]
 gi|396035751|gb|EJI44423.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-2659]
 gi|396035761|gb|EJI44432.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 78-1757]
 gi|396037097|gb|EJI45748.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-1427]
 gi|396056737|gb|EJI65210.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22510-1]
 gi|396057131|gb|EJI65603.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 8b-1]
 gi|396058228|gb|EJI66694.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648905 5-18]
 gi|396064124|gb|EJI72511.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-3079]
 gi|396065851|gb|EJI74219.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 6-18]
 gi|434964921|gb|ELL57884.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1882]
 gi|434965611|gb|ELL58549.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22704]
 gi|434975332|gb|ELL67642.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1884]
 gi|434982505|gb|ELL74328.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1594]
 gi|434988191|gb|ELL79790.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1566]
 gi|434991459|gb|ELL82947.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1580]
 gi|434997540|gb|ELL88779.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1543]
 gi|435000702|gb|ELL91824.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1441]
 gi|435007314|gb|ELL98167.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1810]
 gi|435011285|gb|ELM02005.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1558]
 gi|435017229|gb|ELM07737.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1010]
 gi|435018394|gb|ELM08869.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1018]
 gi|435028191|gb|ELM18270.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1729]
 gi|435030802|gb|ELM20791.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0895]
 gi|435040101|gb|ELM29870.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0899]
 gi|435041252|gb|ELM30994.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1457]
 gi|435045294|gb|ELM34939.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1747]
 gi|435050237|gb|ELM39742.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1445]
 gi|435054151|gb|ELM43587.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0968]
 gi|435054161|gb|ELM43596.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1444]
 gi|435059604|gb|ELM48879.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1559]
 gi|435060100|gb|ELM49370.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1565]
 gi|435066780|gb|ELM55851.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1808]
 gi|435074758|gb|ELM63581.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0956]
 gi|435078232|gb|ELM66976.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1455]
 gi|435081917|gb|ELM70558.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1811]
 gi|435096192|gb|ELM84464.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1725]
 gi|435097051|gb|ELM85313.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1575]
 gi|435099775|gb|ELM87966.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1745]
 gi|435101452|gb|ELM89606.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1791]
 gi|435111286|gb|ELM99191.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1795]
 gi|435115161|gb|ELN02951.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 576709]
 gi|435115318|gb|ELN03089.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 635290-58]
 gi|435122362|gb|ELN09884.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-19]
 gi|435123538|gb|ELN11031.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-16]
 gi|435131045|gb|ELN18273.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-9]
 gi|435134557|gb|ELN21685.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-2]
 gi|435143280|gb|ELN30146.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629163]
 gi|435148333|gb|ELN35060.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_N202]
 gi|435164926|gb|ELN50986.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_81-2490]
 gi|435165465|gb|ELN51505.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_76-3618]
 gi|435167798|gb|ELN53668.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13183-1]
 gi|435167881|gb|ELN53734.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL909]
 gi|435173559|gb|ELN59056.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL913]
 gi|435183587|gb|ELN68548.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_69-4941]
 gi|435185185|gb|ELN70073.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 638970-15]
 gi|435203101|gb|ELN86887.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 22-17]
 gi|435203182|gb|ELN86966.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22558]
 gi|435206813|gb|ELN90305.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 40-18]
 gi|435215060|gb|ELN97808.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 1-1]
 gi|435216284|gb|ELN98759.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 4-1]
 gi|435224140|gb|ELO06124.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642046 4-7]
 gi|435230335|gb|ELO11669.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648898 4-5]
 gi|435243456|gb|ELO23713.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648900 1-16]
 gi|435243949|gb|ELO24203.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648899 3-17]
 gi|435247978|gb|ELO27899.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 1-17]
 gi|435252644|gb|ELO32172.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648903 1-6]
 gi|435260223|gb|ELO39436.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648902 6-8]
 gi|435260365|gb|ELO39564.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 39-2]
 gi|435265683|gb|ELO44488.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 653049 13-19]
 gi|435274578|gb|ELO52680.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 9-7]
 gi|435275106|gb|ELO53193.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648904 3-6]
 gi|435277359|gb|ELO55312.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 8-1]
 gi|435286916|gb|ELO64151.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 16-16]
 gi|435288955|gb|ELO65945.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 42-20]
 gi|435296696|gb|ELO73058.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 76-2651]
 gi|435303684|gb|ELO79523.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 33944]
 gi|435312886|gb|ELO86700.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-5646]
 gi|435316197|gb|ELO89388.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 81-2625]
 gi|435329027|gb|ELP00485.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 53-407]
 gi|444881499|gb|ELY05543.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13-1]
 gi|444884078|gb|ELY07922.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. PT23]
          Length = 256

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 11/137 (8%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G  E LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYTEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYPTFWLSRYFADVWM 229
            + P   +S    D+W+
Sbjct: 148 VMSPGHPVS----DIWL 160


>gi|379012737|ref|YP_005270549.1| putative methyltransferase [Acetobacterium woodii DSM 1030]
 gi|375303526|gb|AFA49660.1| putative methyltransferase [Acetobacterium woodii DSM 1030]
          Length = 207

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 5/130 (3%)

Query: 91  GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA 150
           G + + M D+ LE     N    V+D+G G G     I+   +AK +  LD SP  +  A
Sbjct: 27  GKFVKCMYDEILERIVAINPET-VLDLGCGNGNVLKKIMDISNAK-LFGLDLSPKMIESA 84

Query: 151 KQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC 209
           ++K  L E   +E GDAE LP+  +  D  +   S  ++P+P R + E  RVLK GG   
Sbjct: 85  QKK--LGEKVTLEVGDAEKLPYAENQFDIVICNASFHHYPNPDRVLSEIKRVLKNGGILI 142

Query: 210 IIGPVYPTFW 219
           +  P  P  W
Sbjct: 143 LGDPTAPFEW 152


>gi|414597737|ref|ZP_11447296.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           E16]
 gi|421877238|ref|ZP_16308787.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           C10]
 gi|421879013|ref|ZP_16310488.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           C11]
 gi|372557008|emb|CCF24907.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           C10]
 gi|390447136|emb|CCF26608.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           C11]
 gi|390481518|emb|CCF29357.1| Demethylmenaquinone methyltransferase [Leuconostoc citreum LBAE
           E16]
          Length = 245

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIV-KHVDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    L +  K  +  +VT LD S   LA  ++K  + +      +++GDA  
Sbjct: 61  IIDLATGTADWALALAEKSNETSHVTGLDFSEEMLAVGQKKVDVSDYSDKITLIQGDAMA 120

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF     D       +   PDP  G++E YRVLK GG+  I+       P+   FW   
Sbjct: 121 LPFDDASFDIVTIGFGLRNLPDPVMGLKEMYRVLKPGGQLVILETSQPDNPIVKPFW-QF 179

Query: 223 YFADVWMLFPK 233
           YF  V  +F K
Sbjct: 180 YFGTVMPVFGK 190


>gi|407402039|gb|EKF29069.1| ubiquinone biosynthesis methyltransferase, putative [Trypanosoma
           cruzi marinkellei]
          Length = 290

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 42/182 (23%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKN--------------VTILDQSPHQLAKAKQK---EPLK 157
           +DV GGTG     I+  V +K               V +LD + + + + + +   E   
Sbjct: 62  LDVAGGTGDIAFRIIDGVRSKEQVFGLVPKLRYSTEVVVLDANENMIREGEARAAREGYL 121

Query: 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG----- 212
           + K V G  E+LPF     D Y  +  I  + D  + +REAYRVLK+GG   ++      
Sbjct: 122 DVKWVVGKGEELPFDDMSFDSYTVSFGIRNFSDRPKALREAYRVLKVGGVLNVLEFSKVT 181

Query: 213 ----------------PVYPTFWLSR----YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
                           PV    ++ R    Y  D    FP +EE+ +    AGF  V+ +
Sbjct: 182 CPFLSFPYDVWSYGFIPVAGQMFVDRESYQYLVDSIRAFPDQEEFAKMISDAGFGYVRYE 241

Query: 253 RI 254
            +
Sbjct: 242 NL 243


>gi|358637405|dbj|BAL24702.1| biotin synthesis protein [Azoarcus sp. KH32C]
          Length = 268

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 28/161 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDL 169
           ++D G GTG+  L I++    DA ++ I D +P  L +        +  I  V GD E L
Sbjct: 52  ILDAGCGTGYG-LNILRDTFPDASSIAI-DFAPAMLEQLMHSANPDDKPILPVCGDLEAL 109

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPVYPTFW-LSRYFAD 226
           P  +   D   S+ +++ W DP R + E  RVLKLGG ACI  +GP   T W L   FA 
Sbjct: 110 PLASGSFDLVWSSLALQ-WCDPNRSLGELARVLKLGGMACIATLGPR--TLWELREAFAA 166

Query: 227 VWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGL 267
           +      + E++  F +A F           W    R HGL
Sbjct: 167 I-----DQAEHVIRFHEADF-----------WLAAARDHGL 191


>gi|254508266|ref|ZP_05120389.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Vibrio
           parahaemolyticus 16]
 gi|219548783|gb|EED25785.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Vibrio
           parahaemolyticus 16]
          Length = 260

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKE--PLKECKIVEGDAED 168
           V+D+GGGTG  T    + V  K   IL   + S   + + K ++   +     V+ +AE+
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGEKGHVILADINNSMLNVGRDKLRDIGVVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSR-YFAD 226
           LPFP DY D    +  +    D  + +R  YRVLK GG+  ++    P    LS+ Y A 
Sbjct: 136 LPFPDDYFDAITISFCLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPVLEPLSKVYDAY 195

Query: 227 VWMLFPKEEEYI 238
            + L PK  E +
Sbjct: 196 SFHLLPKMGELV 207


>gi|119503623|ref|ZP_01625706.1| putative methyltransferase [marine gamma proteobacterium HTCC2080]
 gi|119460685|gb|EAW41777.1| putative methyltransferase [marine gamma proteobacterium HTCC2080]
          Length = 238

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 114 VVDVGGGTGFTTLG--IVKHVDAKNVTI----LDQSPHQLAKAKQKEPLKECKIVEGDAE 167
           ++DVG G G  TL   +   V A  V +    L+ +  ++A  +   P  E + ++GDA 
Sbjct: 17  LLDVGCGEGRHTLAAYLKSGVTAVGVDLGLADLETARGRIADMEAYNPQGEIEFLQGDAT 76

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP-VYP---TFWLSRY 223
            LPFP ++ D  + +  +E+ P+    I E  RVLK GG  C+  P  +P    +WLS+ 
Sbjct: 77  ALPFPDNHFDHVICSEVLEHIPNFIAVIGELNRVLKPGGNLCVSVPRAWPERFCWWLSKD 136

Query: 224 FADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGL 267
           +      +     +I  F  AGF   ++ R G   YR    H L
Sbjct: 137 Y------YNTPGGHIRIF-NAGFLRQEIHRHGLNCYRQHGAHAL 173


>gi|114762147|ref|ZP_01441615.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Pelagibaca bermudensis HTCC2601]
 gi|114545171|gb|EAU48174.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseovarius sp. HTCC2601]
          Length = 250

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++       ++   V GDA  L
Sbjct: 67  LLDVAGGTGDISFRFLKRAGHGHATVLDLTEPMLVEGRKRADAAAMAEQLDWVVGDAMAL 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PFP    D Y  +  I     PQ  + EA+RVLK GG+  ++
Sbjct: 127 PFPDSTFDVYTISFGIRNVTRPQEALNEAFRVLKPGGRLMVL 168


>gi|409991438|ref|ZP_11274699.1| UbiE/COQ5 family methyltransferase [Arthrospira platensis str.
           Paraca]
 gi|291566565|dbj|BAI88837.1| putative methyltransferase [Arthrospira platensis NIES-39]
 gi|409937689|gb|EKN79092.1| UbiE/COQ5 family methyltransferase [Arthrospira platensis str.
           Paraca]
          Length = 203

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)

Query: 66  FIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTT 125
           F Q+K+   WF+   +  YD ++    + + +    LE A+  N +  ++D+G GTG   
Sbjct: 5   FFQNKQ---WFFDRWAPFYDFLLTTVFY-QAVHKRLLEFAEFPN-SANILDIGCGTGRLL 59

Query: 126 LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFPTDYADRYVSAGS 184
             + K       T  D SP  + +AK K    +  + ++G+ E LPFP    D      S
Sbjct: 60  QRLAKQFPDLEGTGFDLSPQMIKEAKNKNIYGDRLQFLQGNVEALPFPESSFDAVFCTIS 119

Query: 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
             ++P P+  + E  RVL+ GG           F+L+ Y  + W
Sbjct: 120 FLHYPHPELVLAEIKRVLRPGG----------VFYLADYTVNDW 153


>gi|406673507|ref|ZP_11080728.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bergeyella
           zoohelcum CCUG 30536]
 gi|405585972|gb|EKB59764.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bergeyella
           zoohelcum CCUG 30536]
          Length = 248

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 30/170 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAEDL 169
           V+DV  GTG   + I K  DA+ +T  D S   L     K K+     + K+++GDAE +
Sbjct: 68  VLDVATGTGDLAIAIQKGTDAE-ITGYDLSQQMLNVGVDKIKKLNLDGKIKMIKGDAEHM 126

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK---------LGGKACIIGPVYPTFWL 220
           PF  D  D   +A  +  + + ++G+ E  RV+K               I+GP+Y  ++ 
Sbjct: 127 PFENDQFDAVTAAFGVRNFENLEKGLSEMRRVVKPNKSVYILEFSKVEGILGPLYMFYFK 186

Query: 221 S----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           +                 Y  D    FP  E+        GFK+V++K++
Sbjct: 187 NILPLIGRLVSKDDRAYTYLPDSVNAFPYGEKMKNILLSVGFKEVKMKKL 236


>gi|417355781|ref|ZP_12131500.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Give str. S5-487]
 gi|353597935|gb|EHC54506.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Give str. S5-487]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--ANSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREGYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|183597382|ref|ZP_02958875.1| hypothetical protein PROSTU_00639 [Providencia stuartii ATCC 25827]
 gi|386742931|ref|YP_006216110.1| ubiquinone/menaquinone biosynthesis methyltransferase [Providencia
           stuartii MRSN 2154]
 gi|188023409|gb|EDU61449.1| ubiquinone/menaquinone biosynthesis methyltransferase [Providencia
           stuartii ATCC 25827]
 gi|384479624|gb|AFH93419.1| ubiquinone/menaquinone biosynthesis methyltransferase [Providencia
           stuartii MRSN 2154]
          Length = 251

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 33/172 (19%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV------E 163
           RN  V+D+ GGTG  T    + V  K   IL      + K   +E L++  IV      +
Sbjct: 63  RNQRVLDLAGGTGDLTAKFSRLVGEKGEVILADINDSMLKMG-REKLRDLGIVGNVSYVQ 121

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGP 213
            +AE+LPFP +Y D    +  +    D  + +R  +RVLK GG+  +          +  
Sbjct: 122 ANAEELPFPDNYFDCITISFGLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPVIEPLNK 181

Query: 214 VYPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
            Y  +                   RY A+   + P +E      + AGF+ V
Sbjct: 182 AYDAYSFHVLPRIGQAVVGDPDSYRYLAESIRMHPDQETLKSMMENAGFEQV 233


>gi|118372904|ref|XP_001019646.1| ubiquinone/menaquinone biosynthesis methyltransferases family protein
            [Tetrahymena thermophila]
 gi|89301413|gb|EAR99401.1| ubiquinone/menaquinone biosynthesis methyltransferases family protein
            [Tetrahymena thermophila SB210]
          Length = 1737

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 93   WTEDMRDD--ALEPADLSNRNML------VVDVGGGTGFTTLGIV-KH-----VDAKN-- 136
            W E+  +D   L P  +  ++ +      V+DV GGTG     I+ KH     +++KN  
Sbjct: 1516 WKEEFVNDLGVLRPTKIQEKDQVIEQPARVLDVAGGTGDIAFRILDKHKSRSSLNSKNLK 1575

Query: 137  VTILDQSPHQLAKAKQKEPLK-----ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP 191
            VT+LD +   L   K++   K     +   V G+AE LPF  +  D Y  A  I   P  
Sbjct: 1576 VTVLDINESMLEVGKRRALEKSFSNNDIDFVCGNAEILPFEDNTFDAYTIAYGIRNVPRI 1635

Query: 192  QRGIREAYRVLKLGGKACII 211
            ++ + EA+RVLK GG+  I+
Sbjct: 1636 EKALSEAHRVLKKGGRLMIL 1655


>gi|317055875|ref|YP_004104342.1| type 11 methyltransferase [Ruminococcus albus 7]
 gi|315448144|gb|ADU21708.1| Methyltransferase type 11 [Ruminococcus albus 7]
          Length = 436

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 104 PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECKIV 162
           P D S R   ++DV  GT   T      +   ++T LD S   LA+A+++   +   K+V
Sbjct: 270 PDDFSGR---LLDVPVGTAVFTHKKYSSLKNADITCLDYSEDMLAQARERMGNIDNVKLV 326

Query: 163 EGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK--AC--IIGPVYPTF 218
           +GD   LP+     D  +S      +PD     RE +RVLK GGK  AC  I G    T 
Sbjct: 327 QGDVGKLPYRNGSFDIVLSMNGFHAFPDKSAAFRETFRVLKKGGKFIACFYIKGESKITD 386

Query: 219 WLSRYF 224
            L R F
Sbjct: 387 CLVRNF 392



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 114 VVDVGGGTG-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           ++D G GTG   TL   K+ D K  T +D +P  +  AK+K+ +K  ++V GD E+LPF 
Sbjct: 51  LLDCGCGTGPMLTLLHRKYPD-KRYTGIDLTPKMIEIAKRKK-MKGVELVVGDCENLPFD 108

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
            D  D  +   S  ++P+P       YRVL+  G+
Sbjct: 109 DDSFDVVICCESFHHYPNPGDFFSSVYRVLRPNGR 143


>gi|345304159|ref|YP_004826061.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Rhodothermus marinus SG0.5JP17-172]
 gi|345113392|gb|AEN74224.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Rhodothermus marinus SG0.5JP17-172]
          Length = 245

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 30/169 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVE-GDAEDL 169
           V+DV  GT    + + + +  + V  +D +   L   +QK     L E  ++  GDAE L
Sbjct: 63  VLDVATGTADLAIEVARRLPVERVVGVDIAESMLQIGQQKVDRLGLSERVVLRRGDAEKL 122

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTF----- 218
           PF     D  + A  +  + + +RG+RE+YRVL+ GG   ++       PV  T      
Sbjct: 123 PFSDAQFDAVLVAFGVRNFENLERGLRESYRVLRPGGVLVVLEFSRPRTPVIRTLYRWYA 182

Query: 219 ---------WLS------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
                    WLS      RY       FP   +++   +K GF D+Q K
Sbjct: 183 HHVLPRIGAWLSRDEGAYRYLPASVEAFPDGPDFLRRMEKVGFHDLQWK 231


>gi|108797075|ref|YP_637272.1| type 11 methyltransferase [Mycobacterium sp. MCS]
 gi|119866160|ref|YP_936112.1| type 11 methyltransferase [Mycobacterium sp. KMS]
 gi|126432697|ref|YP_001068388.1| type 11 methyltransferase [Mycobacterium sp. JLS]
 gi|108767494|gb|ABG06216.1| Methyltransferase type 11 [Mycobacterium sp. MCS]
 gi|119692249|gb|ABL89322.1| Methyltransferase type 11 [Mycobacterium sp. KMS]
 gi|126232497|gb|ABN95897.1| Methyltransferase type 11 [Mycobacterium sp. JLS]
          Length = 235

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 72  EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNM----LVVDVGGGTGFTTLG 127
           +A W  R  S++YD+       T   R  A     L   N+    + +DVG G G  T  
Sbjct: 41  QAVWSSRLGSLLYDN-----SQTVIRRVSAAWQLPLEWLNVPVGGVALDVGSGPGNVTAA 95

Query: 128 IVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186
           + + V    + + +D S   LA+A + E       +  DA+ LP   +  D  VS   ++
Sbjct: 96  LGRVVGPGGLALGVDISEPMLARAVRAEAGPNVGFIRADAQRLPLRDESVDAVVSVAMLQ 155

Query: 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSRYFADVWMLFPKEEEYIEWFQKAG 245
             PDP   + E  RVL+ G +  ++ P       L     +       E+E  +  +  G
Sbjct: 156 LIPDPSAAMAEMVRVLRPGRRMAVMVPTAGQMARLINVLPNAGARVFDEDELGDALEGLG 215

Query: 246 FKDVQLKRIGP-KWYRGVR 263
              V+ K +G  +W RG R
Sbjct: 216 LVGVRTKTMGTVQWARGRR 234


>gi|424888975|ref|ZP_18312578.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393174524|gb|EJC74568.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
          Length = 258

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAASFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|288560154|ref|YP_003423640.1| SAM-dependent methyltransferase UbiE family [Methanobrevibacter
           ruminantium M1]
 gi|288542864|gb|ADC46748.1| SAM-dependent methyltransferase UbiE family [Methanobrevibacter
           ruminantium M1]
          Length = 222

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKE--CKIVEG 164
           +++  ++D+G G G      +K  D K V  LD S   + K+ +  +E + +  C+I++G
Sbjct: 51  DKDDFILDIGCGGGVNVERFLKMTDNK-VFGLDYSELSVEKSIELNRESIDDGRCEIIQG 109

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
              D+PF     +   +  ++ +WPD    ++E +R+LK  G   I     P  +  R  
Sbjct: 110 SVSDMPFEEGIFNIATAFETVYFWPDFVNDLKEVHRILKKDGIFFIANEALPNEYDKRQQ 169

Query: 225 ADVWML---FPKEEEYIEWFQKAGFKDVQ 250
             + +L      +EE  +  +KAGF DV+
Sbjct: 170 RIIELLEMHIYSKEELEDSLEKAGFSDVK 198


>gi|407981463|ref|ZP_11162161.1| methyltransferase domain protein [Mycobacterium hassiacum DSM
           44199]
 gi|407376956|gb|EKF25874.1| methyltransferase domain protein [Mycobacterium hassiacum DSM
           44199]
          Length = 249

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP 172
           V+DVG G G  T  + + V A+ + + +D S   L +A           +  DA+ LPF 
Sbjct: 96  VLDVGCGPGNVTAAMARDVGAEGLALGVDISEPMLERAVAAHAGPTTGFLRADAQRLPFR 155

Query: 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----IGPVYPTFWLSRYFADVW 228
            +  D   S   ++  P     + E +RVL+ G +  +    +GPV P   L   F+   
Sbjct: 156 DETFDAVTSLAVLQLVPVISFAVGEMFRVLRSGRRIAVMVPTVGPVPP--LLRVLFSGTA 213

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRGVR 263
            +F  ++E  + F++ GF  V+  R+G  +W R  R
Sbjct: 214 HIF-DDDELGDLFERQGFTRVRTSRVGNIQWVRAQR 248


>gi|300919150|ref|ZP_07135683.1| methyltransferase domain protein [Escherichia coli MS 115-1]
 gi|432532420|ref|ZP_19769427.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE234]
 gi|300413748|gb|EFJ97058.1| methyltransferase domain protein [Escherichia coli MS 115-1]
 gi|431064681|gb|ELD73543.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE234]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP 151


>gi|387193812|gb|AFJ68723.1| hypothetical protein NGATSA_2005910 [Nannochloropsis gaditana
           CCMP526]
 gi|422293244|gb|EKU20544.1| hypothetical protein NGA_2005910 [Nannochloropsis gaditana CCMP526]
 gi|422293654|gb|EKU20954.1| hypothetical protein NGA_2005920 [Nannochloropsis gaditana CCMP526]
          Length = 387

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+D+  G+G     + +    K V   D S   L + +++   E L   ++V  DA   P
Sbjct: 230 VIDLSCGSGLMARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQP 289

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F T   D   +  ++  WP  +  +RE  RVLK GG+         TF ++         
Sbjct: 290 FQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRM-----YASTFEVNERLQSNTFR 344

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIG 255
           F + +E    F  +GF +V+++R G
Sbjct: 345 FFQLDELRRLFVSSGFVEVEVRREG 369


>gi|386004508|ref|YP_005922787.1| methyltransferase [Mycobacterium tuberculosis RGTB423]
 gi|380724996|gb|AFE12791.1| putative methyltransferase [Mycobacterium tuberculosis RGTB423]
          Length = 347

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 142 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 199

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 200 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 256


>gi|332159397|ref|YP_004424676.1| hypothetical protein PNA2_1757 [Pyrococcus sp. NA2]
 gi|331034860|gb|AEC52672.1| hypothetical protein PNA2_1757 [Pyrococcus sp. NA2]
          Length = 304

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 19/141 (13%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           V+VG GTG       +  +   + +  +   ++A+  +K  +K   ++EG AE+LPFP +
Sbjct: 42  VEVGVGTG-------RFAEPLGIKLGVEPSKKMAEIAEKRGIK---VIEGVAENLPFPDN 91

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--------IGPVYPTFWLSRYFAD 226
             D  +   +I +  DP++ I+EAYRVLK GG   I        IG  Y        F  
Sbjct: 92  SLDCILMVTTICFVDDPEKAIKEAYRVLKPGGHIIIGFIDRESEIGREYERNKEKSVFYR 151

Query: 227 VWMLFPKEEEYIEWFQKAGFK 247
               F    E I+  +K+GFK
Sbjct: 152 EARFFST-REIIDLLEKSGFK 171


>gi|15608661|ref|NP_216039.1| Probable methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|31792709|ref|NP_855202.1| methyltransferase [Mycobacterium bovis AF2122/97]
 gi|121637444|ref|YP_977667.1| methyltransferase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661319|ref|YP_001282842.1| methyltransferase [Mycobacterium tuberculosis H37Ra]
 gi|148822747|ref|YP_001287501.1| methyltransferase [Mycobacterium tuberculosis F11]
 gi|167969336|ref|ZP_02551613.1| hypothetical methyltransferase [Mycobacterium tuberculosis H37Ra]
 gi|224989919|ref|YP_002644606.1| methyltransferase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799422|ref|YP_003032423.1| methyltransferase [Mycobacterium tuberculosis KZN 1435]
 gi|254550543|ref|ZP_05140990.1| methyltransferase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289442976|ref|ZP_06432720.1| methyltransferase [Mycobacterium tuberculosis T46]
 gi|289569556|ref|ZP_06449783.1| methyltransferase [Mycobacterium tuberculosis T17]
 gi|289750088|ref|ZP_06509466.1| methyltransferase [Mycobacterium tuberculosis T92]
 gi|289753609|ref|ZP_06512987.1| methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289757638|ref|ZP_06517016.1| methyltransferase [Mycobacterium tuberculosis T85]
 gi|289761686|ref|ZP_06521064.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294996492|ref|ZP_06802183.1| methyltransferase [Mycobacterium tuberculosis 210]
 gi|297634092|ref|ZP_06951872.1| methyltransferase [Mycobacterium tuberculosis KZN 4207]
 gi|297731079|ref|ZP_06960197.1| methyltransferase [Mycobacterium tuberculosis KZN R506]
 gi|313658411|ref|ZP_07815291.1| methyltransferase [Mycobacterium tuberculosis KZN V2475]
 gi|340626542|ref|YP_004744994.1| putative methyltransferase [Mycobacterium canettii CIPT 140010059]
 gi|375296667|ref|YP_005100934.1| methyltransferase [Mycobacterium tuberculosis KZN 4207]
 gi|378771278|ref|YP_005171011.1| putative methyltransferase [Mycobacterium bovis BCG str. Mexico]
 gi|385998313|ref|YP_005916611.1| methyltransferase [Mycobacterium tuberculosis CTRI-2]
 gi|392386211|ref|YP_005307840.1| unnamed protein product [Mycobacterium tuberculosis UT205]
 gi|392432877|ref|YP_006473921.1| methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|397673376|ref|YP_006514911.1| methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|424803877|ref|ZP_18229308.1| methyltransferase [Mycobacterium tuberculosis W-148]
 gi|433626628|ref|YP_007260257.1| Putative methyltransferase [Mycobacterium canettii CIPT 140060008]
 gi|449063597|ref|YP_007430680.1| methyltransferase [Mycobacterium bovis BCG str. Korea 1168P]
 gi|31618299|emb|CAD96217.1| Probable methyltransferase [Mycobacterium bovis AF2122/97]
 gi|121493091|emb|CAL71562.1| Probable methyltransferase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148505471|gb|ABQ73280.1| putative methyltransferase [Mycobacterium tuberculosis H37Ra]
 gi|148721274|gb|ABR05899.1| hypothetical methyltransferase [Mycobacterium tuberculosis F11]
 gi|224773032|dbj|BAH25838.1| putative methyltransferase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320926|gb|ACT25529.1| methyltransferase [Mycobacterium tuberculosis KZN 1435]
 gi|289415895|gb|EFD13135.1| methyltransferase [Mycobacterium tuberculosis T46]
 gi|289543310|gb|EFD46958.1| methyltransferase [Mycobacterium tuberculosis T17]
 gi|289690675|gb|EFD58104.1| methyltransferase [Mycobacterium tuberculosis T92]
 gi|289694196|gb|EFD61625.1| methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289709192|gb|EFD73208.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289713202|gb|EFD77214.1| methyltransferase [Mycobacterium tuberculosis T85]
 gi|326903153|gb|EGE50086.1| methyltransferase [Mycobacterium tuberculosis W-148]
 gi|328459172|gb|AEB04595.1| methyltransferase [Mycobacterium tuberculosis KZN 4207]
 gi|340004732|emb|CCC43876.1| putative methyltransferase [Mycobacterium canettii CIPT 140010059]
 gi|341601463|emb|CCC64136.1| probable methyltransferase [Mycobacterium bovis BCG str. Moreau
           RDJ]
 gi|344219359|gb|AEM99989.1| methyltransferase [Mycobacterium tuberculosis CTRI-2]
 gi|356593599|gb|AET18828.1| putative methyltransferase [Mycobacterium bovis BCG str. Mexico]
 gi|378544762|emb|CCE37037.1| unnamed protein product [Mycobacterium tuberculosis UT205]
 gi|392054286|gb|AFM49844.1| methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|395138281|gb|AFN49440.1| methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|432154234|emb|CCK51464.1| Putative methyltransferase [Mycobacterium canettii CIPT 140060008]
 gi|440581005|emb|CCG11408.1| putative METHYLTRANSFERASE [Mycobacterium tuberculosis 7199-99]
 gi|444895031|emb|CCP44287.1| Probable methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|449032105|gb|AGE67532.1| methyltransferase [Mycobacterium bovis BCG str. Korea 1168P]
          Length = 347

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 142 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 199

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 200 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 256


>gi|386703403|ref|YP_006167250.1| SAM-dependent methyltransferase [Escherichia coli P12b]
 gi|387610676|ref|YP_006113792.1| putative methyltransferase [Escherichia coli ETEC H10407]
 gi|425286725|ref|ZP_18677674.1| hypothetical protein EC3006_0250 [Escherichia coli 3006]
 gi|432529506|ref|ZP_19766564.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE233]
 gi|309700412|emb|CBI99701.1| putative methyltransferase [Escherichia coli ETEC H10407]
 gi|383101571|gb|AFG39080.1| SAM-dependent methyltransferase [Escherichia coli P12b]
 gi|408219538|gb|EKI43677.1| hypothetical protein EC3006_0250 [Escherichia coli 3006]
 gi|431057844|gb|ELD67262.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE233]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP 151


>gi|163939154|ref|YP_001644038.1| methyltransferase type 11 [Bacillus weihenstephanensis KBAB4]
 gi|163861351|gb|ABY42410.1| Methyltransferase type 11 [Bacillus weihenstephanensis KBAB4]
          Length = 196

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK-----IVEG 164
            N +++D+G G G T   + K      +  +D S +Q  +  +K  +K+ K     I + 
Sbjct: 45  ENAVILDIGCGGGKTIQTLSKQTPLGKIYGIDYS-NQAVENSKKANMKDVKAAKVIIHQA 103

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224
               +P+  D+ D   +  +  +WPD +  ++E +RVLK  G   ++   +      +Y 
Sbjct: 104 SVSSIPYHPDFFDLITAFQTHYFWPDVENDMKEVFRVLKPNGSFLLVAETFKI----QYH 159

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQ 250
            D    F K EE +  F K GF  V+
Sbjct: 160 MDK---FKKTEELVNLFYKTGFTSVK 182


>gi|426409030|ref|YP_007029129.1| hypothetical protein PputUW4_02122 [Pseudomonas sp. UW4]
 gi|426267247|gb|AFY19324.1| hypothetical protein PputUW4_02122 [Pseudomonas sp. UW4]
          Length = 257

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILD--QSPHQLAKAKQKEPLKECKIV--EG 164
           N  + ++D+G  TG +T+ I +H +A  +T +D  ++  ++A    K   +  +I    G
Sbjct: 35  NGALDILDIGSNTGSSTITIAEHFEASRITGIDIEEAMTKIAIKNIKRAKQNSRISFDTG 94

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           DA+ +P+  +  D  VS+GS  +   P+  I E YRVLK  G
Sbjct: 95  DAQAMPYQNESFDLVVSSGSFAFIEKPEVAIEECYRVLKPDG 136


>gi|343500973|ref|ZP_08738858.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           tubiashii ATCC 19109]
 gi|418478608|ref|ZP_13047707.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           tubiashii NCIMB 1337 = ATCC 19106]
 gi|342819552|gb|EGU54395.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           tubiashii ATCC 19109]
 gi|384573763|gb|EIF04251.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           tubiashii NCIMB 1337 = ATCC 19106]
          Length = 260

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 31/164 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTIL---DQSPHQLAKAKQKEP--LKECKIVEGDAED 168
           V+D+GGGTG  T    + V  K   +L   + S   + + K ++   +     V+ +AE+
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGEKGHVVLADINNSMLNVGRDKLRDNGIVGNVHYVQANAEE 135

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF 218
           LPFP DY D    +  +    D  + +R  YRVLK GG+  +          +  +Y T+
Sbjct: 136 LPFPDDYFDAITISFCLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPILEPLSKIYDTY 195

Query: 219 WLS----------------RYFADVWMLFPKEEEYIEWFQKAGF 246
                              RY A+   + P +E       +AGF
Sbjct: 196 SFHLLPKMGELVANDAESYRYLAESIRMHPDQETLKGMMNEAGF 239


>gi|56695070|ref|YP_165417.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Ruegeria pomeroyi DSS-3]
 gi|56676807|gb|AAV93473.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Ruegeria pomeroyi DSS-3]
          Length = 257

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG  +   +K     + T+LD +   L + +++   +        V GDA  L
Sbjct: 74  LLDVAGGTGDISFRFLKRAGHGHATVLDLTEPMLVEGRKRAEAERMADSLDWVVGDAMAL 133

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTFW 219
           PF  +  D Y  +  I     PQ  + EAYRVL+ GG+  +          +  +Y  + 
Sbjct: 134 PFEDNTFDVYTISFGIRNVTRPQEALNEAYRVLRPGGRLMVLEFSQLPNDGLQKLYDLYS 193

Query: 220 LS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +                +Y  +    FP +E ++   Q AGF + + + +
Sbjct: 194 FNVIPRMGQLIANDSASYQYLVESIRNFPNQETFLGMVQAAGFGNAKYRNL 244


>gi|170785372|gb|ACB37731.1| methyltransferase [Micromonospora chalcea]
          Length = 263

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 107 LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKE-CKIV 162
           L +R + V+DV GG G   + I       +VT+LD +P  LA A++    E + E  +I 
Sbjct: 41  LGDRPLRVLDVAGGNGRDAVPIAAR--GHHVTVLDSAPVSLAMAQRLAADEGVAERIEIR 98

Query: 163 EGDAEDLP--FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
           EGDA D+P  F     D  +    ++Y  DP   IR   +VLK GG   ++GP
Sbjct: 99  EGDAHDVPELFAGQEFDLLLCHNLLQYVADPAVVIRGLVKVLKPGGSLSVVGP 151


>gi|15840990|ref|NP_336027.1| methyltransferase [Mycobacterium tuberculosis CDC1551]
 gi|298525035|ref|ZP_07012444.1| methyltransferase [Mycobacterium tuberculosis 94_M4241A]
 gi|13881198|gb|AAK45841.1| methyltransferase, putative [Mycobacterium tuberculosis CDC1551]
 gi|298494829|gb|EFI30123.1| methyltransferase [Mycobacterium tuberculosis 94_M4241A]
          Length = 317

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 112 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 169

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 170 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 226


>gi|410453968|ref|ZP_11307911.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacillus
           bataviensis LMG 21833]
 gi|409932648|gb|EKN69606.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacillus
           bataviensis LMG 21833]
          Length = 234

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 32/169 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP 170
           +DV  GT   T+ + + V +K  VT LD S + L    +K     L++ K++ G+A +LP
Sbjct: 52  LDVCCGTADWTIALAEAVGSKGEVTGLDFSQNMLNVGIEKVKDLGLEQVKLIHGNAMELP 111

Query: 171 FPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF----------- 218
           FP +  D YV+ G  +   PD  + ++E +RV+K GG A  +    PT            
Sbjct: 112 FPDNSFD-YVTIGFGLRNVPDYLQVLKEMHRVVKPGGIAVCLETSQPTLIGYKQLYYFYF 170

Query: 219 ---------WLSRYFAD-VWML-----FPKEEEYIEWFQKAGFKDVQLK 252
                     L++ F +  W+      FP   E  + F++AGFKDV+ K
Sbjct: 171 RFIMPLFGKLLAKSFREYAWLHESARDFPGMRELAKMFEQAGFKDVKFK 219


>gi|186476932|ref|YP_001858402.1| type 11 methyltransferase [Burkholderia phymatum STM815]
 gi|184193391|gb|ACC71356.1| Methyltransferase type 11 [Burkholderia phymatum STM815]
          Length = 250

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK---AKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +  +  H  A +V   D +P  LA    A  +  L   +   G AE LP
Sbjct: 45  VLDLGCGAGHASFAVAPH--AASVVAYDIAPQMLATVAGAAVERGLSNIRTQHGAAEKLP 102

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYFADV 227
           F     D  +S  S  +W D  R + E  RVLK GG+   I   G  +P   L  +   V
Sbjct: 103 FADASFDWGISRMSAHHWHDVPRALVEVRRVLKPGGRVLFIDIAGSDHPL--LDTHLQAV 160

Query: 228 WMLFP-------KEEEYIEWFQKAGFKDVQLKR 253
            +L         + +E++ +F  AGF+ V  +R
Sbjct: 161 ELLRDGSHIRDYRGDEWVSFFVAAGFEAVVRER 193


>gi|170018023|ref|YP_001728942.1| ubiquinone/menaquinone biosynthesis methyltransferase [Leuconostoc
           citreum KM20]
 gi|169804880|gb|ACA83498.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Leuconostoc citreum KM20]
          Length = 236

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 12/131 (9%)

Query: 114 VVDVGGGTGFTTLGIV-KHVDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAED 168
           ++D+  GT    L +  K  +  +VT LD S   LA  ++K  + +      +++GDA  
Sbjct: 52  IIDLATGTADWALALAEKSNETSHVTGLDFSEEMLAVGQKKVDVSDYSDKITLIQGDAMA 111

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII------GPVYPTFWLSR 222
           LPF     D       +   PDP  G++E YRVLK GG+  I+       P+   FW   
Sbjct: 112 LPFDDASFDIVTIGFGLRNLPDPVMGLKEMYRVLKPGGQLVILETSQPDNPIVKPFW-QF 170

Query: 223 YFADVWMLFPK 233
           YF  V  +F K
Sbjct: 171 YFGTVMPVFGK 181


>gi|407712593|ref|YP_006833158.1| type 11 methyltransferase [Burkholderia phenoliruptrix BR3459a]
 gi|407234777|gb|AFT84976.1| type 11 methyltransferase [Burkholderia phenoliruptrix BR3459a]
          Length = 250

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 79  FLSIVYDHVINPGHWT-EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           F S    ++ +P H T  D+R   L  A        V+D+G G G  +  +  H  AK V
Sbjct: 11  FGSTAAAYLTSPTHATGADLR--TLAEAIAGTPGASVLDMGCGAGHASFAVAPH--AKEV 66

Query: 138 TILDQSPHQLAK---AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRG 194
              D +   LA    A ++  L   +  +G AE LPF     D  +S  S  +W D    
Sbjct: 67  IAYDIAAPMLATVEGAAKERGLANIRTQQGAAEKLPFDDHTFDWVISRMSAHHWHDVAPA 126

Query: 195 IREAYRVLKLGGKACII---GPVYPTFWLSRYFADVWMLFP-------KEEEYIEWFQKA 244
           + E  RVLK GGK   I   G  +P   L  +   + +L         +E+E+I  F+ A
Sbjct: 127 LAEVRRVLKPGGKVLFIDIAGIDHPL--LDTHIQAIELLRDGSHIRDYREDEWIAMFEAA 184

Query: 245 GFK 247
           GF+
Sbjct: 185 GFE 187


>gi|300905647|ref|ZP_07123393.1| methyltransferase domain protein [Escherichia coli MS 84-1]
 gi|301305767|ref|ZP_07211853.1| methyltransferase domain protein [Escherichia coli MS 124-1]
 gi|415866171|ref|ZP_11538825.1| methyltransferase domain protein [Escherichia coli MS 85-1]
 gi|417637473|ref|ZP_12287654.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           TX1999]
 gi|419168178|ref|ZP_13712579.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7A]
 gi|419183989|ref|ZP_13727552.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7C]
 gi|419184686|ref|ZP_13728212.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7D]
 gi|419189954|ref|ZP_13733426.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7E]
 gi|420383845|ref|ZP_14883237.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           EPECa12]
 gi|433128494|ref|ZP_20313980.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE163]
 gi|433133396|ref|ZP_20318780.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE166]
 gi|443616218|ref|YP_007380074.1| putative methyltransferase [Escherichia coli APEC O78]
 gi|300402539|gb|EFJ86077.1| methyltransferase domain protein [Escherichia coli MS 84-1]
 gi|300838942|gb|EFK66702.1| methyltransferase domain protein [Escherichia coli MS 124-1]
 gi|315253524|gb|EFU33492.1| methyltransferase domain protein [Escherichia coli MS 85-1]
 gi|345395793|gb|EGX25531.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           TX1999]
 gi|378019460|gb|EHV82291.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7A]
 gi|378019824|gb|EHV82624.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7C]
 gi|378034313|gb|EHV96879.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7D]
 gi|378043018|gb|EHW05457.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC7E]
 gi|391310194|gb|EIQ67850.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           EPECa12]
 gi|431652123|gb|ELJ19283.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE163]
 gi|431663517|gb|ELJ30277.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE166]
 gi|443420726|gb|AGC85630.1| putative methyltransferase [Escherichia coli APEC O78]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP 151


>gi|421753685|ref|ZP_16190674.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 831]
 gi|421755305|ref|ZP_16192255.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 80700075]
 gi|421757411|ref|ZP_16194291.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 80700103]
 gi|421759269|ref|ZP_16196102.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 70102010]
 gi|424674589|ref|ZP_18111505.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 70001275]
 gi|409086367|gb|EKM86486.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 831]
 gi|409088640|gb|EKM88704.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 80700075]
 gi|409090995|gb|EKM91000.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 70102010]
 gi|409092499|gb|EKM92470.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 80700103]
 gi|417434633|gb|EKT89575.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis 70001275]
          Length = 263

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLPF 171
           +D+G G G  +  + ++  ++ V   D     L   K +     LK  +I +G+ E +PF
Sbjct: 55  IDIGCGAGHISYILSRY--SEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIPF 112

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
             +  D  +S  S  +W D  +GI+E YR+LK  G+A  I  + P 
Sbjct: 113 NDNSFDLAISRFSAHHWDDVLKGIKEVYRILKDSGEAIFIDVIAPN 158


>gi|301021450|ref|ZP_07185474.1| methyltransferase domain protein [Escherichia coli MS 69-1]
 gi|419917106|ref|ZP_14435381.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli KD2]
 gi|300398086|gb|EFJ81624.1| methyltransferase domain protein [Escherichia coli MS 69-1]
 gi|388394819|gb|EIL56073.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli KD2]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V A  V   D S H L   A+A +   LK     +G  E LP
Sbjct: 48  VLDMGCGAGHASFVAAQNVSA--VVAYDLSAHMLDVVAQAAEARQLKNITTRQGYVESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  RVLK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRVLKPGGRLIVMDVMSP 151


>gi|433630633|ref|YP_007264261.1| Putative methyltransferase [Mycobacterium canettii CIPT 140070010]
 gi|432162226|emb|CCK59598.1| Putative methyltransferase [Mycobacterium canettii CIPT 140070010]
          Length = 347

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 142 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 199

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 200 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 256


>gi|84501267|ref|ZP_00999472.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Oceanicola batsensis HTCC2597]
 gi|84390558|gb|EAQ03046.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Oceanicola batsensis HTCC2597]
          Length = 248

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE----CKIVEGDAEDL 169
           ++DV GGTG  +   +K   + + T+LD +   LA+ +Q+            V GDA  L
Sbjct: 65  LLDVAGGTGDISFRFLKRAGSGHATVLDLTEPMLAEGRQRAEAARMAGSLDWVVGDAMAL 124

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           PF  +  D Y  +  I     PQ  + EA+RVL+ GG+  ++
Sbjct: 125 PFADNSFDVYTISFGIRNVTRPQDALAEAFRVLRPGGRLMVL 166


>gi|417136628|ref|ZP_11980656.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 97.0259]
 gi|417306739|ref|ZP_12093624.1| hypothetical protein PPECC33_1960 [Escherichia coli PCN033]
 gi|432872801|ref|ZP_20092564.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE147]
 gi|338771676|gb|EGP26411.1| hypothetical protein PPECC33_1960 [Escherichia coli PCN033]
 gi|386159489|gb|EIH15815.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 97.0259]
 gi|431405469|gb|ELG88708.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE147]
          Length = 256

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V A  V   D S H L   A+A +   LK     +G  E LP
Sbjct: 48  VLDMGCGAGHASFVAAQNVSA--VVAYDLSAHMLDVVAQAAEARQLKNITTRQGYVESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  RVLK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRVLKPGGRLIVMDVMSP 151


>gi|298249975|ref|ZP_06973779.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
 gi|297547979|gb|EFH81846.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
          Length = 284

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ---KEPLKECKIVEGDAED 168
           M V+D G G G  TL + + V   +V  LD    Q A A++    E ++      G A +
Sbjct: 48  MRVLDCGCGPGSLTLDLARLVTPGSVIGLDIEGAQFAYAQELARTEGIENVSFEVGSAYE 107

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF  +  D   +  ++ +  DP R +RE  RVLK+GG   +    Y T          W
Sbjct: 108 LPFEDESFDLVFAHATLFHLSDPGRALREFQRVLKIGGLIAVRDTDYST----------W 157

Query: 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVT 274
            L P E   +   ++   K +Q +   P + R +R + +  G + T
Sbjct: 158 QLEP-ETPLLAQMRELILKYMQTRGASPTYARRMRSYLVDAGFTRT 202


>gi|300362631|ref|ZP_07058807.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           gasseri JV-V03]
 gi|300353622|gb|EFJ69494.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Lactobacillus
           gasseri JV-V03]
          Length = 237

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 6/126 (4%)

Query: 113 LVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQL----AKAKQKEPLKECKIVEGDAE 167
            V+D+  GTG  T+ + K V  + NV  LD +   L     K +Q++  KE ++ +GDA 
Sbjct: 53  FVLDLCCGTGDITIALAKQVGPSGNVIGLDFNQEMLDLAEQKIRQQDLQKEIQLKQGDAM 112

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY-FAD 226
           +LP+P    D       +   PD  + ++E YRVLK  GK  ++    PT  L +  +  
Sbjct: 113 ELPYPDQSFDIVTIGFGLRNVPDANQVLKEIYRVLKPTGKVGVLETSQPTNPLIKLGWKS 172

Query: 227 VWMLFP 232
            + LFP
Sbjct: 173 YFKLFP 178


>gi|198423325|ref|XP_002121555.1| PREDICTED: similar to GF20959 [Ciona intestinalis]
          Length = 284

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 38/188 (20%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK------NVTILDQSPHQLAKAKQKE 154
            L P D +     ++D  GGTG  +   +K V  +      NVT+ D +P+ L   K++ 
Sbjct: 88  VLNPCDKTK----LLDCAGGTGDISFRFIKRVKLQHDCPEPNVTVCDINPNMLEVGKRRA 143

Query: 155 PLKECKI--VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-- 209
             +   +  V   A+DL FP    + Y  A  I       + ++EAYRVL+ GG+  C  
Sbjct: 144 ETQNLHLKWVCCSADDLCFPGASFNAYTIAFGIRNCTHIDKVLKEAYRVLEPGGRFLCLE 203

Query: 210 ----------------------IIGPVYPTFWLS-RYFADVWMLFPKEEEYIEWFQKAGF 246
                                 ++G V    W S +Y A+    FP   ++ +  + AGF
Sbjct: 204 FSEVENPYLRNLYNTYSFQVIPVMGEVISGDWKSYQYLAESIRKFPSRSQFSQMMRDAGF 263

Query: 247 KDVQLKRI 254
           ++V  + +
Sbjct: 264 QNVSCESL 271


>gi|187779015|ref|ZP_02995488.1| hypothetical protein CLOSPO_02610 [Clostridium sporogenes ATCC
           15579]
 gi|187772640|gb|EDU36442.1| methyltransferase domain protein [Clostridium sporogenes ATCC
           15579]
          Length = 142

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D SP  + K++   +K   +      G+ E+L
Sbjct: 20  VIDLGSGGGFDCFLASKKVGIKGYIIGVDMSPEMINKSRVMSKKYGYRNVDFRLGEIENL 79

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   + AD  +S   I   P+ QR   EAYRVLK GG+  I
Sbjct: 80  PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRIAI 120


>gi|302337888|ref|YP_003803094.1| type 11 methyltransferase [Spirochaeta smaragdinae DSM 11293]
 gi|301635073|gb|ADK80500.1| Methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
          Length = 249

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLPF 171
           ++DVG GTGF +L + +     ++T LD +   L KA +K       +  V GDAE+LPF
Sbjct: 50  ILDVGAGTGFLSLLLAQK--GHSITALDLTREMLDKAWEKAASLNLNLNFVIGDAENLPF 107

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKA-CIIG 212
            ++  D  VS   +   P P R + E  RVLK GG   CI G
Sbjct: 108 ESESFDFVVSRWLLWTLPHPDRAVLEWKRVLKPGGCVLCIDG 149


>gi|119486111|ref|ZP_01620171.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
 gi|119456602|gb|EAW37731.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
          Length = 297

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECKIVEGDAEDLPF 171
           ++D+G GTG TTL + +      V  +D SP+ L  A+ K K+   E +    +AED  F
Sbjct: 105 ILDLGCGTGSTTLRLKQAFPEAEVIGIDLSPYMLVVAELKAKKAGLEIQFHHANAEDTGF 164

Query: 172 PTDYADRYVSAGSI--EYWPDPQRGI-REAYRVLKLGGKACIIGPVYPTF----WLSRYF 224
           P    D  VSA  +  E  PD  + I +E++R+L++GG+  ++     T     WL+  F
Sbjct: 165 PDGSFD-LVSASLLFHETPPDVAQTITQESFRLLRVGGEMIVLDGNQQTLRQNEWLTEIF 223

Query: 225 ADVWMLFPKEEEYIEWFQKAGFKDVQ 250
            + ++          W  +AGF  VQ
Sbjct: 224 EEPYIKAYAAASLNAWMTQAGFAQVQ 249


>gi|432944776|ref|ZP_20141181.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE196]
 gi|433041702|ref|ZP_20229239.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE117]
 gi|431463792|gb|ELH43915.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE196]
 gi|431560857|gb|ELI34363.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE117]
          Length = 256

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP 151


>gi|424879712|ref|ZP_18303344.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WU95]
 gi|392516075|gb|EIW40807.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WU95]
          Length = 258

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSGNLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAGGFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGEAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|421868164|ref|ZP_16299816.1| SAM-dependent methyltransferase YafE (UbiE paralog) [Burkholderia
           cenocepacia H111]
 gi|358072095|emb|CCE50694.1| SAM-dependent methyltransferase YafE (UbiE paralog) [Burkholderia
           cenocepacia H111]
          Length = 250

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           +  V+D+G G G  +  +  HV  ++V   D +   LA    A ++  L   +  +G AE
Sbjct: 42  DAAVLDLGCGAGHASFAVAPHV--RDVVAYDLAAPMLATVDAAARERGLANVRTQQGPAE 99

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYF 224
            LPF T   D  VS  S  +W D    + E  RVLK GG+  +I   G  +P   L  Y 
Sbjct: 100 RLPFDTATFDWVVSRMSAHHWHDMHAALAEVRRVLKPGGRVLMIDIAGNDHPL--LDTYL 157

Query: 225 ADVWMLFP-------KEEEYIEWFQKAGFKDVQLK 252
               +L         + +E++  F+ AGF D Q+ 
Sbjct: 158 QAAEVLRDASHVRDYRADEWLAMFRAAGF-DAQVH 191


>gi|111021145|ref|YP_704117.1| hypothetical protein RHA1_ro04166 [Rhodococcus jostii RHA1]
 gi|397734226|ref|ZP_10500936.1| ubiE/COQ5 methyltransferase family protein [Rhodococcus sp. JVH1]
 gi|110820675|gb|ABG95959.1| probable ubiquinone/menaquinone biosynthesis methyltransferase
           [Rhodococcus jostii RHA1]
 gi|396929894|gb|EJI97093.1| ubiE/COQ5 methyltransferase family protein [Rhodococcus sp. JVH1]
          Length = 271

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQ--LAKAKQKEPLKECKIVEGDAEDLPF 171
           +D+G GTG  T  +   V A    I LD +P    LA+ + +E     + V GDA  LPF
Sbjct: 56  LDLGSGTGSETRALAAAVTASGRAIGLDPNPGMALLARERAEEEGSTAQFVIGDAYSLPF 115

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           P D  D   S    ++  +P R   E  RVL+ GG+  I+
Sbjct: 116 PDDRLDVVRSERVFQHLSEPDRAAAEVARVLRPGGRGVIV 155


>gi|126177977|ref|YP_001045942.1| methyltransferase type 11 [Methanoculleus marisnigri JR1]
 gi|125860771|gb|ABN55960.1| Methyltransferase type 11 [Methanoculleus marisnigri JR1]
          Length = 213

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 115 VDVGGGTGFTTLGI-VKHVDAKNVTILDQSPHQLAKA----KQKEPLKECKIVEGDAEDL 169
           +D+G G G  +LGI +    A  VT+LD SP  +A A    ++        ++ GD  ++
Sbjct: 47  LDIGSGPG--SLGIALAQASALAVTLLDSSPEMIAIAGGNVREAGLSGRVALLSGDVHEI 104

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           P P    D  VS GS+ +W D  R   E +RVL  GG A + G
Sbjct: 105 PLPDRSVDLAVSRGSLFFWEDLPRAFSEIHRVLAPGGTAYVGG 147


>gi|448317238|ref|ZP_21506796.1| type 11 methyltransferase [Natronococcus jeotgali DSM 18795]
 gi|445604662|gb|ELY58609.1| type 11 methyltransferase [Natronococcus jeotgali DSM 18795]
          Length = 264

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 78  RFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNV 137
           R  S  Y      G W +  R  ALEP  L +R   V+DVG GTG  +  ++    A  V
Sbjct: 2   REFSEDYLERTREGMWDDSRR--ALEPLALGSRER-VLDVGCGTGELSR-VLAAESAGEV 57

Query: 138 TILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIRE 197
              D  P  L +A++  P     +V GDA  LPFP D  D  V    +   PDP+  IRE
Sbjct: 58  VGCDADPALLERAREHVP-----VVAGDALRLPFPDDAFDLVVCQALLINLPDPEAAIRE 112

Query: 198 AYRV 201
             RV
Sbjct: 113 FARV 116


>gi|21226763|ref|NP_632685.1| arsenite S-adenosylmethyltransferase [Methanosarcina mazei Go1]
 gi|452209238|ref|YP_007489352.1| tRNA (adenine57/58-N1)-methyltransferase [Methanosarcina mazei
           Tuc01]
 gi|20905055|gb|AAM30357.1| methyltransferase [Methanosarcina mazei Go1]
 gi|452099140|gb|AGF96080.1| tRNA (adenine57/58-N1)-methyltransferase [Methanosarcina mazei
           Tuc01]
          Length = 249

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 22/168 (13%)

Query: 89  NPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQL 147
           NP    E      L+P D+      V+D+G G GF      + V ++  V  +D +P  +
Sbjct: 64  NPASIAE------LKPGDI------VLDLGSGAGFDCFLAAQKVGNSGKVIGVDMTPEMV 111

Query: 148 AKAK---QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKL 204
            K +   +K      +  +GD E LP      D  +S   I   PD ++  REA+RVLKL
Sbjct: 112 EKVQANARKYGYSNVEFRQGDIEALPVEDSSVDVIISNCVINLAPDKEKVFREAFRVLKL 171

Query: 205 GGKACIIGPVYPTFWLSRYFADVWMLFP------KEEEYIEWFQKAGF 246
           GG+  I   V           D  +L         +EEY++  ++AGF
Sbjct: 172 GGRLYISDLVLLDELPEDLKNDRDLLAGCVAGAVLKEEYLKLLKRAGF 219


>gi|113474535|ref|YP_720596.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110165583|gb|ABG50123.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 201

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECK 160
           LE  DLSN    V+D+G GTG     +  +        LD SP  +++A  +    +  K
Sbjct: 36  LEYVDLSNSAN-VLDLGCGTGKLLHRLAVNFPTLQGNGLDLSPEMISQANSRNCYPQRLK 94

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
            + G+AE++PF  D  D   +  S  ++P PQ+   E  RVL+ GG   ++
Sbjct: 95  FLLGNAEEIPFENDVFDAVFNTISFLHYPHPQQVFNEVNRVLRHGGYFYLV 145


>gi|401563811|ref|ZP_10804746.1| methyltransferase domain protein [Selenomonas sp. FOBRC6]
 gi|400189431|gb|EJO23525.1| methyltransferase domain protein [Selenomonas sp. FOBRC6]
          Length = 208

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK----ECKIVEGDA 166
           N  V+D G G G      ++ VD  +VT LD S   +AKA++          C IV+G+ 
Sbjct: 46  NEQVLDCGCGGGANVAVFLRMVDEGHVTGLDYSTVSVAKAREVNSAAIATGRCSIVQGNV 105

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           + LPF     D   +  ++ +WP+  R   E +RVLK GG
Sbjct: 106 QALPFDDGGFDVVTAFETVYFWPELPRCFGEMHRVLKPGG 145


>gi|406575992|ref|ZP_11051670.1| type 11 methyltransferase [Janibacter hoylei PVAS-1]
 gi|404554613|gb|EKA60137.1| type 11 methyltransferase [Janibacter hoylei PVAS-1]
          Length = 320

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 114 VVDVGGGTGFTTLGI--VKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF 171
            +++G GTGF +L +     VD  +V+ L     + AKA  +    E +    DAE LP+
Sbjct: 73  TLELGAGTGFFSLNLKLAGLVDEVHVSDLSPGMVEAAKANAQRLGFEIEGRVADAESLPY 132

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-PVYPTFWLSRYFA 225
             D  D  V    I + PD +  +RE  RVLK GG+  I G P     W +R+ +
Sbjct: 133 EDDSFDLVVGHAVIHHIPDVEGALREVVRVLKPGGRFVIAGEPTRIGHWYARHLS 187


>gi|310828233|ref|YP_003960590.1| putative methyltransferase [Eubacterium limosum KIST612]
 gi|308739967|gb|ADO37627.1| putative methyltransferase [Eubacterium limosum KIST612]
          Length = 297

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 8/146 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ--KEPLKECK--IVEGDAEDL 169
           V+DVG G G     +   +D   +  +D S   +  +K+  K  ++  K  I +G    +
Sbjct: 137 VLDVGCGGGAALKRLSGRIDGGKLYGIDYSEVSVEASKELNKADIESGKMEIHQGSVSKM 196

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229
           PF  +  D  ++  S  +WPD +  +RE +RVLK GG   +I  +Y    L  +  ++  
Sbjct: 197 PFEDNLFDAIITVESYYFWPDLEEDMREVFRVLKEGGTFMLIAEMYLNDDLDEHHIEMAR 256

Query: 230 LFPKE----EEYIEWFQKAGFKDVQL 251
            F       +E+   F+K G+K+ ++
Sbjct: 257 KFELRNLTVDEFKALFEKTGYKETKI 282


>gi|237730194|ref|ZP_04560675.1| methyltransferase type 11 [Citrobacter sp. 30_2]
 gi|226905733|gb|EEH91651.1| methyltransferase type 11 [Citrobacter sp. 30_2]
          Length = 256

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV  K V   D S   L   A+A +   L+     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHV--KQVVAYDLSSQMLEVVAEAAKDRGLENVATRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  R +RE  RVLK GG   ++  + P
Sbjct: 106 FEDSEFDVVISRYSAHHWHDVGRALREVNRVLKPGGVLIVMDVMSP 151


>gi|428777232|ref|YP_007169019.1| type 11 methyltransferase [Halothece sp. PCC 7418]
 gi|428691511|gb|AFZ44805.1| Methyltransferase type 11 [Halothece sp. PCC 7418]
          Length = 207

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%)

Query: 97  MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156
            R  AL+  +L   +  ++D+  G G TT  ++++  + +VT LD SP  L +AK++ P 
Sbjct: 33  FRQLALKGLNLDQHSQ-ILDLCCGAGQTTQFLLQY--SHHVTGLDASPLALERAKKRAP- 88

Query: 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGK-ACI 210
            E   VEG AE+LPF +   D   ++ ++      Q  + + E YRVLKLGG  ACI
Sbjct: 89  -EANYVEGLAEELPFASASFDLVQTSVALHEMTPKQLTQILTEVYRVLKLGGIFACI 144


>gi|418046416|ref|ZP_12684504.1| Methyltransferase type 11 [Mycobacterium rhodesiae JS60]
 gi|353192086|gb|EHB57590.1| Methyltransferase type 11 [Mycobacterium rhodesiae JS60]
          Length = 212

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE-CKIVEGDAEDLPFP 172
           V++VG GTG  T+   + V + +VT LD  P  L +A++K   +   +   G A+ LPF 
Sbjct: 60  VLEVGAGTGNVTIRAARAVKSADVTALDPDPRALERARRKAAGRPGIRFEHGYAQQLPFT 119

Query: 173 TDYADRYVSAGSIEYWPDPQR--GIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
               DR +S+  + +     +   + EA+RVLK GG+  I+  V+    L     ++  L
Sbjct: 120 DSTFDRVLSSMMLHHLDREVKAAALAEAFRVLKSGGEIHIVDIVHGHGRLRTGAGEIPEL 179

Query: 231 FPKEEEYIEWFQKAGFKDVQLKRIGP-KWYRG 261
                  +  F  A     +L+ +GP ++YRG
Sbjct: 180 M-----RLSGFDCAVTGSRRLRFVGPVQYYRG 206


>gi|296101375|ref|YP_003611521.1| methyltransferase type 11 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055834|gb|ADF60572.1| methyltransferase type 11 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 257

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV    VT  D S   L   A+A + + L      +G AE LP
Sbjct: 49  VLDLGCGAGHASFTAAQHV--AQVTAYDLSSQMLEVVAEAAKAKGLNNVDTRQGYAESLP 106

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  + +RE  RVLK GG   I+  + P
Sbjct: 107 FEEASFDVVISRYSAHHWHDVGQALREVKRVLKPGGTVIIMDVMSP 152


>gi|190890022|ref|YP_001976564.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           etli CIAT 652]
 gi|218513236|ref|ZP_03510076.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           etli 8C-3]
 gi|254790017|sp|B3PZ92.1|UBIE_RHIE6 RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|190695301|gb|ACE89386.1| ubiquinone/menaquinone biosynthesis methyltransferase protein
           [Rhizobium etli CIAT 652]
          Length = 258

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLA----KAKQKEPLKECKIVEGDAED 168
           V+DV GGTG     IV+    + + T+LD +   L     +A++K+       VE +AE+
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRQAHATVLDINGSMLGVGAERAEKKKLSANLTFVEANAEE 133

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY--- 215
           LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y   
Sbjct: 134 LPFEAASFDAYTIAFGIRNVPRIDVALAEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAW 193

Query: 216 -----PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 194 SFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|399078745|ref|ZP_10752982.1| ubiquinone/menaquinone biosynthesis methyltransferase [Caulobacter
           sp. AP07]
 gi|398033199|gb|EJL26509.1| ubiquinone/menaquinone biosynthesis methyltransferase [Caulobacter
           sp. AP07]
          Length = 252

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 35/174 (20%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKN---------VTILDQSPHQLAKAKQKEPLKECKIVE 163
           +++D  GGTG       K   A           + I+D +   +    +K    E     
Sbjct: 63  IIIDCAGGTGDMARRFAKMTRAAQERRGGPDALINIIDYNAEMIGAGIEKGGAPEITWTV 122

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGP 213
           GDA+ LP P  YAD YV +  I    D    +REA RVLK GG+  C+         +  
Sbjct: 123 GDAQRLPLPDAYADAYVISFGIRNVTDIDAALREARRVLKPGGRFLCLEFSKPVTEALAK 182

Query: 214 VYPTF----------WLSR------YFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
            Y  +          WL++      Y  +    FP +  +    + AGFK V +
Sbjct: 183 AYDAYSFKLIPQFGEWLAKDRDAYQYLVESIRRFPDQRTFAAMMENAGFKRVTI 236


>gi|268591396|ref|ZP_06125617.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Providencia rettgeri DSM 1131]
 gi|291313046|gb|EFE53499.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Providencia rettgeri DSM 1131]
          Length = 251

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 33/172 (19%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV------E 163
           RN  V+D+ GGTG  T    + V  K   IL      + K   +E L++  IV      +
Sbjct: 63  RNQRVLDLAGGTGDLTAKFSRLVGEKGEVILADINDSMLKMG-REKLRDLGIVGNVNYVQ 121

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC-------IIGPV-- 214
            +AE+LPFP +Y D    +  +    D  + +R  +RVLK GG+         II P+  
Sbjct: 122 ANAEELPFPDNYFDCITISFGLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPIIEPLNK 181

Query: 215 -YPTFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
            Y  +                   RY A+   + P +E      + AGF+ V
Sbjct: 182 AYDAYSFHILPRIGQAIVNDPDSYRYLAESIRMHPNQETLKGMMENAGFEQV 233


>gi|149912816|ref|ZP_01901350.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseobacter sp. AzwK-3b]
 gi|149813222|gb|EDM73048.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Roseobacter sp. AzwK-3b]
          Length = 247

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 30/171 (17%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI----VEGDAEDL 169
           ++DV GGTG  +   +K   + + T+LD +   L + +++    + +     + GDA  L
Sbjct: 64  LLDVAGGTGDISFRFLKRAGSGHATVLDLTEPMLVEGRKRAEAAQMQDQLDWMVGDAMAL 123

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG-------------PVYP 216
           PF  +  D Y  +  I     PQ  + EA+RVL+ GG+  ++               +Y 
Sbjct: 124 PFEDNSFDVYTISFGIRNVTRPQEALNEAFRVLRPGGRLMVLEFSQIPNDLMQWAYDLYS 183

Query: 217 TFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
              + R             Y  +    FP +E ++E  + AGF++ + + +
Sbjct: 184 FNIIPRMGQMIAGDRDSYQYLVESIRKFPDQETFLEMVRAAGFENAKFRNL 234


>gi|107023364|ref|YP_621691.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116690447|ref|YP_836070.1| type 11 methyltransferase [Burkholderia cenocepacia HI2424]
 gi|105893553|gb|ABF76718.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116648536|gb|ABK09177.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424]
          Length = 250

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 18/154 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           +  V+D+G G G  +  +  HV  ++V   D +   LA    A ++  L   +  +G AE
Sbjct: 42  DAAVLDLGCGAGHASFAVAPHV--RDVVAYDLAAPMLATVEAAARERGLANVRTQQGPAE 99

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYF 224
            LPF T   D  VS  S  +W D +  + E  RVLK GG+  +I   G  +P   L  Y 
Sbjct: 100 RLPFDTATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNDHPL--LDTYL 157

Query: 225 ADVWMLFP-------KEEEYIEWFQKAGFKDVQL 251
               +L         + +E++  F+ AGF D Q+
Sbjct: 158 QAAEVLRDASHVRDYRADEWLAMFRAAGF-DAQV 190


>gi|405371016|ref|ZP_11026727.1| Methyltransferase type 11 [Chondromyces apiculatus DSM 436]
 gi|397089001|gb|EJJ19937.1| Methyltransferase type 11 [Myxococcus sp. (contaminant ex DSM 436)]
          Length = 192

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 81  SIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTIL 140
           ++ YD V+ P  W   +   A     +   +  V++VG GTG    G    V   +VT +
Sbjct: 3   ALAYDAVMTPLGW---LGLTAARRKLVHGLSGEVLEVGTGTGLALPGYPDTV--TSVTAI 57

Query: 141 DQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYR 200
           D     LA+A+Q+ P  + +++    E LPFPT   D  VS+        P R + E +R
Sbjct: 58  DVDDEALARARQRRP--DARLLSASVESLPFPTASFDAVVSSLVFCSVESPARALAEIFR 115

Query: 201 VLKLGG 206
           VL+ GG
Sbjct: 116 VLRPGG 121


>gi|365885482|ref|ZP_09424481.1| putative peptide synthase with thioesterase and phosphopantetheinyl
           transferase domains protein (fragment) [Bradyrhizobium
           sp. ORS 375]
 gi|365285848|emb|CCD97012.1| putative peptide synthase with thioesterase and phosphopantetheinyl
           transferase domains protein (fragment) [Bradyrhizobium
           sp. ORS 375]
          Length = 291

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+DVG G G T   +       ++T +D +P  +A  +Q       +  +GDAEDL F  
Sbjct: 95  VLDVGCGRGGTLATLAARFAPASLTGVDLNPTSIAHCRQAHADPRLRFFQGDAEDLAFGD 154

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
              D   +  S   +PD  R  RE  RVL+LGG
Sbjct: 155 GSFDLVTNIESSNAYPDIDRFYREVNRVLRLGG 187


>gi|373118272|ref|ZP_09532404.1| hypothetical protein HMPREF0995_03240 [Lachnospiraceae bacterium
           7_1_58FAA]
 gi|371667421|gb|EHO32547.1| hypothetical protein HMPREF0995_03240 [Lachnospiraceae bacterium
           7_1_58FAA]
          Length = 203

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 9/123 (7%)

Query: 91  GHWTEDMRDDALEPADLSN-------RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQS 143
            H+++ MR  A   A++ N       R+M V+++  GTG  +  +  +V     T  D S
Sbjct: 14  AHYSKFMRRSAPIYAEICNHIRPHLTRDMNVLELACGTGQLSFPLSPYVRLWEAT--DAS 71

Query: 144 PHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLK 203
              +A+AK++           DA  LP+ ++  D  V A ++   P+P++ +REA RVLK
Sbjct: 72  SKMIAEAKKQTGSSRLHFSVQDASRLPYASETFDAVVIANALHILPEPEKVLREARRVLK 131

Query: 204 LGG 206
            GG
Sbjct: 132 PGG 134


>gi|254364395|ref|ZP_04980441.1| hypothetical methyltransferase [Mycobacterium tuberculosis str.
           Haarlem]
 gi|134149909|gb|EBA41954.1| hypothetical methyltransferase [Mycobacterium tuberculosis str.
           Haarlem]
          Length = 347

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 142 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 199

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 200 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 256


>gi|168178148|ref|ZP_02612812.1| UbiE/COQ5 methyltransferase [Clostridium botulinum NCTC 2916]
 gi|182670814|gb|EDT82788.1| UbiE/COQ5 methyltransferase [Clostridium botulinum NCTC 2916]
          Length = 205

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 83  VIDLGSGGGFDCFLASKKVGTKGYIIGIDMTPEMISKSRIMSRKYRYRNVDFRLGEIENL 142

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   + AD  +S   I   P+ QR   EAYRVLK GG+  I
Sbjct: 143 PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRIAI 183


>gi|326483813|gb|EGE07823.1| ubiquinone biosynthesis methyltransferase coq5 [Trichophyton
           equinum CBS 127.97]
          Length = 318

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 39/198 (19%)

Query: 88  INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGI------VKHVDAKNVTILD 141
           +NPG             +++ ++   ++DV GGTG     +      +KH     VT+ D
Sbjct: 96  LNPGRQYAREGPSKSGSSEIEHQGWNILDVAGGTGDIAFRMLDHATNIKHDQYTRVTVAD 155

Query: 142 QSPHQLAKAKQKE------PLKECKIVEGDAEDLP-FPTDYADRYVSAGSIEYWPDPQRG 194
            +P  L + K++              ++G+AE +P  P++  D Y  A  I  + + Q  
Sbjct: 156 INPDMLTEGKKRSLDTPYYNSDRLSFMQGNAESMPSIPSNSVDLYTVAFGIRNFTNKQAA 215

Query: 195 IREAYRVLKLGGK-ACI---------IGPVYPTFWLS----------------RYFADVW 228
           + EAYRVLK GG  AC+            VY  +                   +Y  +  
Sbjct: 216 LEEAYRVLKPGGVFACLEFSKVTVGAFDEVYKRWSFGAIPLIGQLVAGDRASYQYLVESI 275

Query: 229 MLFPKEEEYIEWFQKAGF 246
             FP +EE+    +KAGF
Sbjct: 276 ERFPSQEEFRGMIRKAGF 293


>gi|152975380|ref|YP_001374897.1| methyltransferase type 11 [Bacillus cytotoxicus NVH 391-98]
 gi|152024132|gb|ABS21902.1| Methyltransferase type 11 [Bacillus cytotoxicus NVH 391-98]
          Length = 225

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           V+D+G G G+ T  +   +    V  +D S   + KAK++   +    ++GD   LPF  
Sbjct: 51  VLDIGCGDGYGTYKL--SIAGYKVCGIDLSEQMIQKAKERGEGENLSFIKGDLLALPFEN 108

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI--IGPV 214
           +     V+  S+E+  DP + + E  R+L  GG ACI  +GP 
Sbjct: 109 ERFSAIVAINSLEWTEDPLQSLHEIKRILYSGGYACIALLGPT 151


>gi|220907156|ref|YP_002482467.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219863767|gb|ACL44106.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 283

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)

Query: 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAE 167
           R ML  D+G GTG TTL + +      V  LD SP+ L    +K      E + ++GDA 
Sbjct: 102 RRML--DLGCGTGSTTLLLKQAFPQTEVIGLDLSPYMLFMGDRKATAAGLEIQFIQGDAT 159

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRG---IREAYRVLKLGGKACIIG----PVYPTFWL 220
              FP+   D  V+A  + +   P+     +REA+R+L  GG+  I+      +  T WL
Sbjct: 160 QTGFPSASFD-VVTATLLFHETPPEAAAKILREAFRLLTPGGQILILDGNQQTLRQTNWL 218

Query: 221 SRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           ++ F + ++    +     W  +AGF+ V+
Sbjct: 219 TQVFEEPYIHAYADGSLDAWLARAGFQQVK 248


>gi|146304768|ref|YP_001192084.1| type 11 methyltransferase [Metallosphaera sedula DSM 5348]
 gi|145703018|gb|ABP96160.1| Methyltransferase type 11 [Metallosphaera sedula DSM 5348]
          Length = 230

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +DVG G G     I  +V  +    LD S   LA  K+K        V GDA  LPF  +
Sbjct: 86  LDVGTGPG----KIFDYVKCEQCYGLDISMRFLAILKRKR--SRVTAVRGDAMSLPFADE 139

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML-FPK 233
             D   S   +  +PDP + I E  RVLK GG+ C +G +     ++   +  W L    
Sbjct: 140 SFDGATSMFVVHMFPDPSKPISEISRVLKRGGR-CSMGVLTKRGMIANVLSRWWKLELRP 198

Query: 234 EEEYIEWFQKAGFKDVQLKRIGP 256
           E  Y+   ++   K   ++++GP
Sbjct: 199 ETYYVSISERFNLKTTSVRQMGP 221


>gi|254247509|ref|ZP_04940830.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
 gi|124872285|gb|EAY64001.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
          Length = 250

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 18/154 (11%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAE 167
           +  V+D+G G G  +  +  HV  ++V   D +   LA    A ++  L   +  +G AE
Sbjct: 42  DAAVLDLGCGAGHASFAVAPHV--RDVVAYDLAAPMLATVEAAARERGLANVRTQQGPAE 99

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII---GPVYPTFWLSRYF 224
            LPF T   D  VS  S  +W D +  + E  RVLK GG+  +I   G  +P   L  Y 
Sbjct: 100 RLPFDTATFDWVVSRMSAHHWHDMRAALAEVRRVLKPGGRVLMIDIAGNDHPL--LDTYL 157

Query: 225 ADVWMLFP-------KEEEYIEWFQKAGFKDVQL 251
               +L         + +E++  F+ AGF D Q+
Sbjct: 158 QAAEVLRDASHVRDYRADEWLAMFRAAGF-DAQV 190


>gi|448712813|ref|ZP_21701842.1| type 11 methyltransferase [Halobiforma nitratireducens JCM 10879]
 gi|445790239|gb|EMA40908.1| type 11 methyltransferase [Halobiforma nitratireducens JCM 10879]
          Length = 226

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 13/158 (8%)

Query: 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI 161
           +EP D       ++D+G G+G+    +  + DA  V  LD SP     A +     +   
Sbjct: 36  VEPGDT------ILDLGCGSGYAGRALRDNADAGRVYGLDGSPEMARNATEYTDDPQVGY 89

Query: 162 VEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACIIG----PVYP 216
           V GD   LPF  D  D   S  +  Y  DP   + E  RVL+ GG   C +      V+ 
Sbjct: 90  VVGDFGSLPFADDSIDHVWSMEAFYYAADPHTTLEEIARVLRPGGTFYCAVNYYEENVHS 149

Query: 217 TFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
             W    F ++ M     E+Y E F+ AG +  +   I
Sbjct: 150 HEWQE--FIEIEMTRWDREQYREGFRDAGLRVAEQDNI 185


>gi|315230427|ref|YP_004070863.1| methyltransferase [Thermococcus barophilus MP]
 gi|315183455|gb|ADT83640.1| methyltransferase [Thermococcus barophilus MP]
          Length = 225

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174
           +D+G GTG  TL + +     +V  +D S   L  AK K P  +   +  +A +LPF  +
Sbjct: 44  LDLGCGTGNYTLELYRR--GFDVIGVDLSQEMLKIAKAKIP--DVLFIRANAYNLPFKKE 99

Query: 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-----LSRYFADV-- 227
             D  +S    E+  +P++ + E YR+LKLGG+  I      + W     +   F +   
Sbjct: 100 AFDLVLSVTMFEFIHEPEKVLNEIYRILKLGGEVVIGTMNGKSLWFLFKRVKSLFVETAY 159

Query: 228 -WMLFPKEEEYIEWFQKAGFKDVQLKRI 254
            +  F   +E       AGF DV+ K +
Sbjct: 160 RYARFYTSKELESLLANAGFSDVESKSV 187


>gi|392957467|ref|ZP_10322990.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacillus
           macauensis ZFHKF-1]
 gi|391876430|gb|EIT85027.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacillus
           macauensis ZFHKF-1]
          Length = 219

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK----EP 155
           D L+    S ++  V+DVG GTG   L +    +A ++T LD S   +  ++Q     E 
Sbjct: 30  DTLKEKTGSWQDQDVLDVGCGTG--RLLLRGADEAASLTGLDLSTEMIKASQQNFFYHEY 87

Query: 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
            ++ + + GDA  LPF +   D  VS   +   P PQ GIRE  RV K GG   ++ P
Sbjct: 88  SQKSEFIVGDACQLPFSSQQFDLVVSTCVMFLLPVPQEGIREMLRVTKQGGAIAMLNP 145


>gi|381283066|gb|AFG19426.1| MycF3 [Streptomyces flaveolus]
          Length = 323

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 104 PADL---SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECK 160
           P DL   +++++L V  G G G   L  V  VDAK++  LD S   + +A      +  +
Sbjct: 102 PFDLDGYADKSVLEVGCGLGEGLNFLSRV--VDAKSMIGLDLSDQAVRRANAALSRRGLR 159

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            V+GDAE+LPF     D  V+  S   +P  ++ +RE  RVLK GG
Sbjct: 160 YVQGDAENLPFEDGEVDVLVNIESAHNYPSLEKFLREVARVLKPGG 205


>gi|319781509|ref|YP_004140985.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167397|gb|ADV10935.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 258

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 114 VVDVGGGTGFTTLGIV--KHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGDAE 167
           V+DV GGTG     IV   H +A + T+LD +   LA    +A++K        VE +AE
Sbjct: 74  VLDVAGGTGDIAFRIVDASHGNA-HATVLDINGSMLAVGRDRAEKKGLSGNTDFVEANAE 132

Query: 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           +LPFP    D Y  A  I   P  +  + EA+RVLK GG+
Sbjct: 133 ELPFPDATFDAYTIAFGIRNVPRIEVALGEAFRVLKPGGR 172


>gi|163854148|ref|YP_001642191.1| type 11 methyltransferase [Methylobacterium extorquens PA1]
 gi|163665753|gb|ABY33120.1| Methyltransferase type 11 [Methylobacterium extorquens PA1]
          Length = 259

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  T  +   V  ++VT LD S   L   A   Q+  L          E LP
Sbjct: 48  VLDLGCGGGHVTYAVAPEV--RSVTSLDLSQSMLDAVAAEAQRRGLANVATRRASVEALP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230
           F     D  VS  S  +W D    +REA+RVL  GG+  ++  V+P   L       W L
Sbjct: 106 FADASFDSVVSRYSAHHWGDVPAALREAHRVLAPGGRFGLVDVVHPGPPLLDTHLQAWEL 165

Query: 231 FPK--------EEEYIEWFQKAGFKDVQLKR 253
                      E E+     +AGF    ++R
Sbjct: 166 LRDPSHVRDYGEAEWRRMLAEAGFVPGAVRR 196


>gi|423719462|ref|ZP_17693644.1| 2-heptaprenyl-1,4-naphthoquinonemethyltransferase [Geobacillus
           thermoglucosidans TNO-09.020]
 gi|383367554|gb|EID44831.1| 2-heptaprenyl-1,4-naphthoquinonemethyltransferase [Geobacillus
           thermoglucosidans TNO-09.020]
          Length = 234

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 32/169 (18%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           +DV  GT   T+ + + V  +  V  LD S + L   +QK     L   K++ G+A +LP
Sbjct: 52  LDVCCGTADWTIALAEAVGPSGEVYGLDFSKNMLRVGEQKVKERQLTNVKLIHGNAMNLP 111

Query: 171 FPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGK-ACI------------------ 210
           FP +  D YV+ G  +   PD    ++E YRV K GGK  C+                  
Sbjct: 112 FPDNMFD-YVTIGFGLRNVPDYMTVLKEMYRVTKPGGKVVCLETSQPTLIGFRQLYYFYF 170

Query: 211 --IGPVYPTFWLSRYFADVWML-----FPKEEEYIEWFQKAGFKDVQLK 252
             I P++   +   Y    W+      FP  +E  E F+ AGF D+++K
Sbjct: 171 RFIMPLFGKLFAKSYEEYSWLQESARDFPGRDELAEMFRAAGFVDIEVK 219


>gi|167649029|ref|YP_001686692.1| ubiquinone/menaquinone biosynthesis methyltransferase [Caulobacter
           sp. K31]
 gi|189037017|sp|B0T7D0.1|UBIE_CAUSK RecName: Full=Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE; AltName:
           Full=2-methoxy-6-polyprenyl-1,4-benzoquinol methylase;
           AltName: Full=Demethylmenaquinone methyltransferase
 gi|167351459|gb|ABZ74194.1| ubiquinone/menaquinone biosynthesis methyltransferase [Caulobacter
           sp. K31]
          Length = 252

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 35/174 (20%)

Query: 113 LVVDVGGGTGFTTLGIVKHVDAKN---------VTILDQSPHQLAKAKQKEPLKECKIVE 163
           +++D  GGTG       K   A           + I+D +   +    +K    E     
Sbjct: 63  IIIDCAGGTGDMARRFAKMTRAAQERRGGPDALINIIDYNAEMIGAGIEKGGAPEITWTV 122

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-ACI---------IGP 213
           GDA+ LP P  YAD YV +  I    D    +REA RVLK GG+  C+         +  
Sbjct: 123 GDAQRLPLPDAYADAYVISFGIRNVTDIDAALREARRVLKPGGRFLCLEFSKPVTEALSK 182

Query: 214 VYPTF----------WLSR------YFADVWMLFPKEEEYIEWFQKAGFKDVQL 251
            Y  +          WL++      Y  +    FP ++ +    + AGFK V +
Sbjct: 183 AYDAYSFKLIPQFGEWLAKDRDAYQYLVESIRRFPDQKTFAGMMENAGFKRVTI 236


>gi|327401522|ref|YP_004342361.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6]
 gi|327317030|gb|AEA47646.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6]
          Length = 252

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 85  DHVINPGHWT-EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQ 142
           D+  +PGH +  ++  D L  A +  R M ++DVG GTGF  L I+  +  + V I L +
Sbjct: 22  DYDKSPGHASLPEVWRDVL--ASVFERRMQILDVGTGTGFLAL-ILAELGHEVVGIDLSK 78

Query: 143 SPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVL 202
              ++AK K ++   + +   GDAE+LPF     D  +    +   P+PQ+ I E  RV+
Sbjct: 79  GMLEVAKKKARKLGVDVEFKLGDAENLPFDDCSFDAVICRHLLWTLPNPQKAIEEWSRVV 138

Query: 203 KLGGKACII 211
           + GGK   I
Sbjct: 139 RDGGKVVAI 147


>gi|14521105|ref|NP_126580.1| ubiquinone/menaquinone biosynthesis methyl transferase [Pyrococcus
           abyssi GE5]
 gi|5458322|emb|CAB49811.1| ubiE ubiquinone/menaquinone biosynthesis methyltransferase
           [Pyrococcus abyssi GE5]
 gi|380741670|tpe|CCE70304.1| TPA: ubiquinone/menaquinone biosynthesis methyl transferase
           [Pyrococcus abyssi GE5]
          Length = 200

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 5/100 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL--AKAKQKEPLKECKIVEGDAEDLPF 171
           V+++G GTG T     ++V+   +  +D S   L  A+ + K      K +  +AE+LPF
Sbjct: 40  VLEIGVGTGKTLKYYPRNVE---LYAIDGSEEMLKVARERAKSLGINAKFIRAEAENLPF 96

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           P D+ D  VS+      P+P+R ++E  RVLK GG A  +
Sbjct: 97  PNDFFDYVVSSFVFCTVPNPERAMKEIVRVLKPGGGAIFL 136


>gi|332525130|ref|ZP_08401307.1| arsenite S-adenosylmethyltransferase [Rubrivivax benzoatilyticus
           JA2]
 gi|332108416|gb|EGJ09640.1| arsenite S-adenosylmethyltransferase [Rubrivivax benzoatilyticus
           JA2]
          Length = 293

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 10/149 (6%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQ---KEPLKECKIVEGDAEDL 169
           V+D+G G G   L   + V    +   LD +   LA A+Q   K  L+    + G+ E++
Sbjct: 80  VLDLGSGGGIDVLLSARRVGPTGMAFGLDMTREMLALAEQNKSKSGLRNVFFLRGEIENI 139

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-----ACIIGPVYPTFWLSRYF 224
           P P D  D  +S   I    D  R +REA+RVLK GG+       + G V       R  
Sbjct: 140 PLPDDTVDVIISNCVINLSADKDRVLREAFRVLKPGGRFAVSDIVVRGEVPAAIRADRTL 199

Query: 225 -ADVWMLFPKEEEYIEWFQKAGFKDVQLK 252
            A       ++ +Y+   + AGF+   ++
Sbjct: 200 WAGCVAGALRDSDYLARLRAAGFEHAAIE 228


>gi|375082989|ref|ZP_09730029.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Thermococcus
           litoralis DSM 5473]
 gi|374742336|gb|EHR78734.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Thermococcus
           litoralis DSM 5473]
          Length = 201

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP 170
           V+++G GTG       K V+   V  +D S + L KA+++     L+  K++  DA+DL 
Sbjct: 41  VLEIGVGTGKNLPYYPKDVE---VIGIDFSRNMLKKAEERRRKLGLENVKLLYMDAQDLE 97

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           F  +  D  VS       PDP +G++EAYRVLK GG+A  +
Sbjct: 98  FEDNTFDTIVSTFVFCTVPDPIKGLKEAYRVLKPGGRAIFL 138


>gi|282163236|ref|YP_003355621.1| ABC transporter ATP binding protein [Methanocella paludicola SANAE]
 gi|282155550|dbj|BAI60638.1| ABC transporter ATP binding protein [Methanocella paludicola SANAE]
          Length = 572

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 18/203 (8%)

Query: 76  FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAK 135
           F+  +S  YD+ ++ G   +++R  ALE           V++G GTG+ T  + +  D+ 
Sbjct: 15  FWDAVSQKYDNAVD-GTMGKNLRPTALEKLSQEAGLGRAVELGCGTGYFTKTLARVADS- 72

Query: 136 NVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRG 194
            V   D     LA+A ++          + D     FP D  D  + A  + Y PDP   
Sbjct: 73  -VVATDFCEGMLARAMERLSSAGNITFQKEDCMKTSFPDDTFDTVLMALVLNYIPDPAAA 131

Query: 195 IREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254
           + EA R+LK GG+  I+ P       +R     + L             AG+ D Q++  
Sbjct: 132 LAEARRILKPGGRLIIVNPDNSFIGEARKRLSSYKLM------------AGYGDAQVRY- 178

Query: 255 GPKWYRGVRRHGLIMGCSVTGVK 277
            P+ +R +   GL       G K
Sbjct: 179 -PQTFRNLSADGLYKMLETAGFK 200


>gi|209917397|ref|YP_002291481.1| putative biotin synthesis protein [Escherichia coli SE11]
 gi|300823394|ref|ZP_07103524.1| methyltransferase domain protein [Escherichia coli MS 119-7]
 gi|331666451|ref|ZP_08367331.1| putative biotin synthesis protein [Escherichia coli TA271]
 gi|331675868|ref|ZP_08376585.1| putative biotin synthesis protein [Escherichia coli H591]
 gi|417223695|ref|ZP_12026986.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 96.154]
 gi|417268412|ref|ZP_12055773.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 3.3884]
 gi|417600472|ref|ZP_12251058.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           STEC_94C]
 gi|419389625|ref|ZP_13930467.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15A]
 gi|419394798|ref|ZP_13935584.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15B]
 gi|419401681|ref|ZP_13942407.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15C]
 gi|419405328|ref|ZP_13946032.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15D]
 gi|419410839|ref|ZP_13951514.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15E]
 gi|423709938|ref|ZP_17684288.1| hypothetical protein ESTG_04363 [Escherichia coli B799]
 gi|432375296|ref|ZP_19618312.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE12]
 gi|432833308|ref|ZP_20066856.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE136]
 gi|209910656|dbj|BAG75730.1| putative biotin synthesis protein [Escherichia coli SE11]
 gi|300524012|gb|EFK45081.1| methyltransferase domain protein [Escherichia coli MS 119-7]
 gi|331066296|gb|EGI38174.1| putative biotin synthesis protein [Escherichia coli TA271]
 gi|331076428|gb|EGI47705.1| putative biotin synthesis protein [Escherichia coli H591]
 gi|345354374|gb|EGW86598.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           STEC_94C]
 gi|378246066|gb|EHY06002.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15A]
 gi|378248608|gb|EHY08521.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15C]
 gi|378252318|gb|EHY12211.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15B]
 gi|378257717|gb|EHY17553.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15D]
 gi|378261511|gb|EHY21304.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
           DEC15E]
 gi|385704997|gb|EIG42066.1| hypothetical protein ESTG_04363 [Escherichia coli B799]
 gi|386198743|gb|EIH97734.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 96.154]
 gi|386230770|gb|EII58125.1| ribosomal protein L11 methyltransferase-like protein [Escherichia
           coli 3.3884]
 gi|430901620|gb|ELC23517.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE12]
 gi|431388470|gb|ELG72193.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli KTE136]
          Length = 256

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEVRQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRMIVMDVMSP 151


>gi|433641677|ref|YP_007287436.1| Putative methyltransferase [Mycobacterium canettii CIPT 140070008]
 gi|432158225|emb|CCK55512.1| Putative methyltransferase [Mycobacterium canettii CIPT 140070008]
          Length = 347

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 90  PGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149
           P  +   +        DL+ + +L V  G G G +   I +++   + T LD +P  +  
Sbjct: 142 PNRYCIQLYHQTASQVDLTGKEVLEVSCGAGGGASY--IARNLGPASYTGLDLNPASIDL 199

Query: 150 AKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
            + K  L   + V+GDA++LPFP +  D  V+  +   +PD +  + E  RVL+ GG
Sbjct: 200 CRAKHRLPGLQFVQGDAQNLPFPDESFDAVVNVEASHQYPDFRGFLAEVARVLRPGG 256


>gi|398307151|ref|ZP_10510737.1| putative methyltransferase [Bacillus vallismortis DV1-F-3]
          Length = 198

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +++VG G G+    ++K      +  +D S   +  A +    K  ++++G+ E  P   
Sbjct: 47  ILEVGFGPGYCMQQMLKREKDIRLDGIDVSETMMKLAARSVKSKGVRLMQGNIETFPLTD 106

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK 233
            + D+ +S  +   W D  +G+++ YR LK GGKA I         +    AD      K
Sbjct: 107 SFYDKVISVNNYTIWNDQTKGVKQIYRALKPGGKAAIT--------MQPREADASPEKTK 158

Query: 234 E--EEYIEWFQKAGFK--DVQLKRIGPK 257
              ++ I  F+ AGF+  D+Q K I P+
Sbjct: 159 SFGKQMIADFKAAGFEDIDIQFKNIKPE 186


>gi|424915835|ref|ZP_18339199.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM597]
 gi|392852011|gb|EJB04532.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM597]
          Length = 258

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 37/170 (21%)

Query: 114 VVDVGGGTGFTTLGIV----KHVDAKNVTILDQSPHQLA----KAKQKEPLKECKIVEGD 165
           V+DV GGTG     IV    +H  A   T+LD +   L     +A++K+       VE +
Sbjct: 74  VLDVAGGTGDIAFRIVEASGRHAHA---TVLDINGSMLGVGAERAEKKKLSGNLTFVEAN 130

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVY 215
           AE+LPF     D Y  A  I   P     + EAYRVLK GG+  +          +  +Y
Sbjct: 131 AEELPFEAASFDAYTIAFGIRNVPRIDAALAEAYRVLKRGGRLLVLEFSEVDMPLLDKIY 190

Query: 216 --------PTFWLS--------RYFADVWMLFPKEEEYIEWFQKAGFKDV 249
                   P F  +        +Y  +    FP +E +    ++AGF  V
Sbjct: 191 DAWSFNAIPQFGKAITGDAEPYQYLVESIRKFPNQENFAAMIRQAGFSRV 240


>gi|170756710|ref|YP_001780398.1| UbiE/COQ5 family methlytransferase [Clostridium botulinum B1 str.
           Okra]
 gi|429247431|ref|ZP_19210681.1| UbiE/COQ5 family methyltransferase [Clostridium botulinum
           CFSAN001628]
 gi|169121922|gb|ACA45758.1| methyltransferase, UbiE/COQ5 family, selenocysteine-containing
           [Clostridium botulinum B1 str. Okra]
 gi|428755563|gb|EKX78184.1| UbiE/COQ5 family methyltransferase [Clostridium botulinum
           CFSAN001628]
          Length = 217

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 95  VIDLGSGGGFDCFLASKKVGVKGYIIGVDMTPEMISKSRIMSRKYRYRNVDFRLGEIENL 154

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   + AD  +S   I   P+ QR   EAYRVLK GG+  I
Sbjct: 155 PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRIAI 195


>gi|56707797|ref|YP_169693.1| hypothetical protein FTT_0677c [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670268|ref|YP_666825.1| hypothetical protein FTF0677c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134302019|ref|YP_001121988.1| UbiE/COQ5 family methlytransferase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254370295|ref|ZP_04986300.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874610|ref|ZP_05247320.1| methlytransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|379717046|ref|YP_005305382.1| SAM-dependent methyltransferase YafE (UbiE-like protein)
           [Francisella tularensis subsp. tularensis TIGB03]
 gi|379725650|ref|YP_005317836.1| SAM-dependent methyltransferase YafE (UbiE-like protein)
           [Francisella tularensis subsp. tularensis TI0902]
 gi|385794436|ref|YP_005830842.1| methlytransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis NE061598]
 gi|421751831|ref|ZP_16188868.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis AS_713]
 gi|56604289|emb|CAG45310.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320601|emb|CAL08693.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049796|gb|ABO46867.1| methlytransferase, UbiE/COQ5 family [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568538|gb|EDN34192.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840609|gb|EET19045.1| methlytransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158971|gb|ADA78362.1| methlytransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis NE061598]
 gi|377827099|gb|AFB80347.1| SAM-dependent methyltransferase YafE (UbiE-like protein)
           [Francisella tularensis subsp. tularensis TI0902]
 gi|377828723|gb|AFB78802.1| SAM-dependent methyltransferase YafE (UbiE-like protein)
           [Francisella tularensis subsp. tularensis TIGB03]
 gi|409086558|gb|EKM86674.1| methyltransferase, UbiE/COQ5 family protein [Francisella tularensis
           subsp. tularensis AS_713]
          Length = 258

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 115 VDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLPF 171
           +D+G G G  +  + ++  ++ V   D     L   K +     LK  +I +G+ E +PF
Sbjct: 50  IDIGCGAGHISYILSRY--SEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIPF 107

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
             +  D  +S  S  +W D  +GI+E YR+LK  G+A  I  + P 
Sbjct: 108 NDNSFDLAISRFSAHHWDDVLKGIKEVYRILKDSGEAIFIDVIAPN 153


>gi|295702995|ref|YP_003596070.1| methyltransferase domain-containing protein [Bacillus megaterium
           DSM 319]
 gi|294800654|gb|ADF37720.1| Methyltransferase domain protein [Bacillus megaterium DSM 319]
          Length = 257

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAED 168
           +L V  GGG     L  V     + VT  D +P  L  A+   ++   +    V+GDAED
Sbjct: 45  LLDVATGGGHVANKLAPV----FQEVTAFDLTPQMLQSAEVFIKENGYENVSFVQGDAED 100

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           +PF  D  D      +  ++P+ ++ I+E YRVLK GG+  +I  V P
Sbjct: 101 MPFQDDEFDTVTCRIAPHHFPNIKQFIKEVYRVLKPGGQFLLIDNVAP 148


>gi|226948050|ref|YP_002803141.1| methyltransferase family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226841654|gb|ACO84320.1| methyltransferase family protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 217

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 95  VIDLGSGGGFDCFLASKKVGTKGYIIGVDMTPEMISKSRVMSRKYRYRNVDFRLGEIENL 154

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   + AD  +S   I   P+ QR   EAYRVLK GG+  I
Sbjct: 155 PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRIAI 195


>gi|238927551|ref|ZP_04659311.1| methyltransferase [Selenomonas flueggei ATCC 43531]
 gi|238884833|gb|EEQ48471.1| methyltransferase [Selenomonas flueggei ATCC 43531]
          Length = 208

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECKIVEGDAEDL 169
           V+D G G G      ++ VD  +VT LD S   + KA++          C+IV+G+ ++L
Sbjct: 49  VLDCGCGGGANIAVFLRMVDEGHVTGLDYSSVSVEKAREVNHAAIAAGRCEIVQGNVQEL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           PF     D   +  ++ +WP+  R   + +RVLK GG
Sbjct: 109 PFDDSQFDVVTAFETVYFWPEIARCFAQVHRVLKPGG 145


>gi|227873866|ref|ZP_03992088.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227840292|gb|EEJ50700.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 229

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 104 PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---KECK 160
           P D S R   ++++  GTG  TL + K +    +  +D +P  +  AK++  L   +   
Sbjct: 59  PKDFSGR---LLEIPVGTGIMTLPLYKGLPKAEIVCMDYAPEMMEPAKERATLLGIENIH 115

Query: 161 IVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKAC 209
             +GD   LPF  +  D  +S      +PD +   +E +RVLK GG  C
Sbjct: 116 FQQGDVGALPFQAESFDIVLSMNGFHVFPDKEAAYQEVFRVLKPGGIFC 164


>gi|408370625|ref|ZP_11168400.1| ubiquinone/menaquinone biosynthesis methyltransferase [Galbibacter
           sp. ck-I2-15]
 gi|407743862|gb|EKF55434.1| ubiquinone/menaquinone biosynthesis methyltransferase [Galbibacter
           sp. ck-I2-15]
          Length = 243

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC----KIVEGDAEDL 169
           ++D+  GTG   + + K   A  +  LD S   L   KQK   K      ++V GD+E L
Sbjct: 61  ILDIATGTGDLAINLAKETHAPKIVGLDISAGMLEVGKQKVADKNLTDRIELVLGDSEQL 120

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           PF  +  D    A  +  + D ++G+ E YRVLK  G   ++    PT
Sbjct: 121 PFDDNSFDAITVAFGVRNFEDLEKGLAEIYRVLKKDGTFVVLETSIPT 168


>gi|365104538|ref|ZP_09334136.1| hypothetical protein HMPREF9428_00005 [Citrobacter freundii
           4_7_47CFAA]
 gi|363644142|gb|EHL83441.1| hypothetical protein HMPREF9428_00005 [Citrobacter freundii
           4_7_47CFAA]
          Length = 256

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    +HV  K V   D S   L   A+A +   L+     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQHV--KQVMAYDLSSQMLEVVAEAAKDRGLENVATRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F     D  +S  S  +W D  R +RE  RVLK GG   ++  + P
Sbjct: 106 FEDSEFDVVISRYSAHHWHDVGRALREVNRVLKPGGVLIVMDVMSP 151


>gi|238852495|ref|ZP_04642908.1| menaquinone biosynthesis methyltransferase UbiE [Lactobacillus
           gasseri 202-4]
 gi|238834882|gb|EEQ27106.1| menaquinone biosynthesis methyltransferase UbiE [Lactobacillus
           gasseri 202-4]
          Length = 237

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 30/171 (17%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQL----AKAKQKEPLKECKIVEGDAEDL 169
           +D+  GTG  T+ + K V  + NV  LD +   L     K +Q+   KE ++ +GDA  L
Sbjct: 55  LDLCCGTGDITIALAKQVGPSGNVIGLDFNQEMLDLAEQKIRQQNLQKEIQLKQGDAMHL 114

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF------WLS-- 221
           P+P    D       +   PD  + ++E YRVLK  GK  ++    PT       W S  
Sbjct: 115 PYPDQSFDIVTIGFGLRNVPDANQVLKEIYRVLKPTGKVGVLETSQPTNPLIKLGWKSYF 174

Query: 222 -----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
                            +Y +     F   +   E   K GFK+VQ+ ++ 
Sbjct: 175 RLFPSFAKLLGANVSDYQYLSHTTAEFVSAQHLKEMLVKNGFKNVQVNKLN 225


>gi|200390108|ref|ZP_03216719.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199602553|gb|EDZ01099.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 256

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--AYSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|392410161|ref|YP_006446768.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfomonile tiedjei DSM 6799]
 gi|390623297|gb|AFM24504.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Desulfomonile tiedjei DSM 6799]
          Length = 246

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173
           +VDVG GTG  TL  +  V   +   +D S H L +A  +    +   V   AE LPFP 
Sbjct: 49  IVDVGCGTG-VTLRHLTGVHRFSAIGVDASSHLLHQACFEN--HDLLFVRSIAERLPFPD 105

Query: 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215
            +AD   +  S+    DP+R + E  R+LK+GGK  II  VY
Sbjct: 106 AFADGIFAECSLSTMNDPERALDEFQRLLKIGGKL-IITDVY 146


>gi|268323315|emb|CBH36903.1| conserved hypothetical protein, methyltransferase domain family
           [uncultured archaeon]
          Length = 253

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEG 164
           ++RN+ ++DVG GTGF  L   +      VT +D S   L K++    K+ L     + G
Sbjct: 48  TDRNLNILDVGTGTGFLALLFAEL--GHKVTGIDISKSMLEKSRCNAYKQKL-AVNFMHG 104

Query: 165 DAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
           DAE+LPF     D  ++   +   PDP+  + E  RV+K GGK  +I
Sbjct: 105 DAENLPFDDGSFDIVMNRYLLWTLPDPKTAVNEWSRVVKSGGKLILI 151


>gi|407782781|ref|ZP_11129990.1| hypothetical protein P24_11155 [Oceanibaculum indicum P24]
 gi|407205077|gb|EKE75054.1| hypothetical protein P24_11155 [Oceanibaculum indicum P24]
          Length = 282

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDL 169
           V+D+  G G   L I + V +  +VT  D +   LA AK++   +    +     DAE L
Sbjct: 54  VLDLASGAGEPALTIAEMVGETGHVTATDLAEGMLAGAKRRAADRRTGNIGFEIADAESL 113

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII--GPVYPTFWLSRYFADV 227
           PFP    DR      + ++PD  + +RE  RVLK GG+A  +  GP+          A V
Sbjct: 114 PFPDAGFDRVTCRFGLMFFPDKPKALRECLRVLKPGGRAGFMVWGPLADNAVFQINMAAV 173

Query: 228 W-MLFPKEEEYIE 239
             ++ P++E ++E
Sbjct: 174 LEVMGPQDETFLE 186


>gi|423420438|ref|ZP_17397527.1| menaquinone biosynthesis methyltransferase ubiE [Bacillus cereus
           BAG3X2-1]
 gi|401102347|gb|EJQ10334.1| menaquinone biosynthesis methyltransferase ubiE [Bacillus cereus
           BAG3X2-1]
          Length = 237

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 32/169 (18%)

Query: 115 VDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP 170
           +DV  GT   T+ +   V +  NV  LD S + LA  KQK     LK+ +++ G+A +LP
Sbjct: 52  LDVCCGTADWTIALAGAVGENGNVYGLDFSENMLAVGKQKVEALELKQVELIHGNAMELP 111

Query: 171 FPTDYADRYVSAG-SIEYWPDPQRGIREAYRVLKLGGKA-CI------------------ 210
           F  +  D YV+ G  +   PD  + ++E  RV+K GGK  C+                  
Sbjct: 112 FEDNTFD-YVTIGFGLRNVPDYMQVLKEMTRVVKPGGKVICLETSQPTMIGFRQGYVLYF 170

Query: 211 --IGPVYPTFWLSRYFADVWM-----LFPKEEEYIEWFQKAGFKDVQLK 252
             I P++   +   Y    W+      FP  +E    F++AG K+VQ+K
Sbjct: 171 KYIMPLFGKMFAKSYKEYSWLQESASTFPGMKELASMFEEAGLKNVQVK 219


>gi|347839978|emb|CCD54550.1| similar to ubiquinone biosynthesis methyltransferase coq5
           [Botryotinia fuckeliana]
          Length = 321

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 39/172 (22%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKN------VTILDQSPHQLAKAKQKEPLKE------CKI 161
           ++D+ GGTG     ++ H    N      +TI D +P  LA+ +++              
Sbjct: 124 MLDIAGGTGDIAFRLLDHATNINKSPSSSITISDINPEMLAEGRKRSLQTSYAHSPRLNF 183

Query: 162 VEGDAEDLPF-PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK-AC-----IIGPV 214
           +  +AE LP  P++  D Y  A  I  + +    +REA+RVLK GG  AC     +  P+
Sbjct: 184 LLANAESLPMVPSNSLDLYTVAFGIRNFTNKDAALREAHRVLKPGGLFACLEFSDVTNPL 243

Query: 215 YPTFWLSRYFADVWML--------------------FPKEEEYIEWFQKAGF 246
           +   +    F+ + ++                    FPK+EE+ +  ++AGF
Sbjct: 244 FNAIYKQWSFSAIPLIGQLVAGDRDSYQYLVESIEKFPKQEEFRDMIKEAGF 295


>gi|384136546|ref|YP_005519260.1| type 11 methyltransferase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
 gi|339290631|gb|AEJ44741.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
          Length = 284

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)

Query: 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECKIVE------- 163
           M V+D+G G G  T  I   + A  +T +D+S   LA AK+ E  L+    +        
Sbjct: 50  MRVLDIGCGFGALTFDIAA-LYAVQLTGIDRSSTALAVAKRVEHDLRNAGAIAAGCAIEW 108

Query: 164 --GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211
             GDAE LP P + AD  VS    ++  +P   +RE +RVLK GG  C+I
Sbjct: 109 KTGDAEALPLPDNDADVAVSRFLFQHLTNPNAAVREIFRVLKPGGFTCLI 158


>gi|387817029|ref|YP_005677373.1| ubie/COQ5 methyltransferase [Clostridium botulinum H04402 065]
 gi|322805070|emb|CBZ02630.1| ubie/COQ5 methyltransferase [Clostridium botulinum H04402 065]
          Length = 211

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK---QKEPLKECKIVEGDAEDL 169
           V+D+G G GF      K V  K   I +D +P  ++K++   +K   +      G+ E+L
Sbjct: 89  VIDLGSGGGFDCFLASKKVGTKGYIIGVDMTPEMISKSRVMSRKYRYRNVDFRLGEIENL 148

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
           P   + AD  +S   I   P+ QR   EAYRVLK GG+  I
Sbjct: 149 PVADNTADVIISNCVINLSPNKQRVYNEAYRVLKKGGRIAI 189


>gi|313679199|ref|YP_004056938.1| bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone
           methylase/demethylmenaquinone methyltransferase
           [Oceanithermus profundus DSM 14977]
 gi|313151914|gb|ADR35765.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase;
           demethylmenaquinone methyltransferase [Oceanithermus
           profundus DSM 14977]
          Length = 234

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 28/165 (16%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPH--QLAKAKQKEPLKECKIVEGDAEDLPF 171
           ++DV  GTG   L + +      V   D +P   +LA+AK +    + + VE DA  LPF
Sbjct: 53  ILDVATGTGDVALLLKRARPEAEVVGGDFTPQMLELARAKAERAGLDVRFVEADALALPF 112

Query: 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYPTF--- 218
                D    A     + D +RG+ E YRVL  GG+A I          +G  Y  +   
Sbjct: 113 ADASFDAVTVAFGFRNFADYERGLAEFYRVLAPGGRAVILEFPPPPEGLLGRAYRFYFNG 172

Query: 219 ---WLS----------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
              W+           RY  +    FP+ E   E  + AGF  V+
Sbjct: 173 VLPWIGGVISGRPEAYRYLPNSVERFPRPERLAEMMRAAGFAGVR 217


>gi|260779110|ref|ZP_05888002.1| biotin synthesis protein BioC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605274|gb|EEX31569.1| biotin synthesis protein BioC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 267

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 104 PADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE 163
           P DLSN+   V+D+G GTG+ +  + +      V   D S   L KA+++      +   
Sbjct: 48  PEDLSNKT--VLDLGCGTGYFSDKLRQR--GALVICCDLSQQMLNKAEERCGSAGMRYQL 103

Query: 164 GDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGK 207
           GDAE LPFPT   D   S+ ++++  D  R +RE  RV+K  G+
Sbjct: 104 GDAEALPFPTASVDYVFSSLALQWCEDLSRPLREMRRVVKPAGQ 147


>gi|397164138|ref|ZP_10487596.1| methyltransferase domain protein [Enterobacter radicincitans DSM
           16656]
 gi|396094693|gb|EJI92245.1| methyltransferase domain protein [Enterobacter radicincitans DSM
           16656]
          Length = 253

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 13/121 (10%)

Query: 114 VVDVGGGTG---FTTLGIVKHVDAKNVT--ILDQSPHQLAKAKQKEPLKECKIVEGDAED 168
           V+D+G G G   F   G+V+ V A +++  +LD    Q A+ +Q   L     V G AE 
Sbjct: 47  VLDLGCGAGHASFVAAGVVREVTAYDLSEKMLD-VVRQAARDRQ---LSNINTVHGAAEQ 102

Query: 169 LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228
           LPF     D  +S  S  +W D    +RE  RVLK GGK  ++    P     R   D+W
Sbjct: 103 LPFADGAFDVVISRYSAHHWHDVALALREVKRVLKPGGKFILMDIASP----GRPVLDIW 158

Query: 229 M 229
           +
Sbjct: 159 L 159


>gi|345886592|ref|ZP_08837831.1| hypothetical protein HMPREF0178_00605 [Bilophila sp. 4_1_30]
 gi|345038155|gb|EGW42636.1| hypothetical protein HMPREF0178_00605 [Bilophila sp. 4_1_30]
          Length = 408

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAK-------QKEPLKECKIVEGD 165
           VVD+G G GF      + V A    I +D +P  LAKA+       Q+  L   +   G+
Sbjct: 213 VVDLGSGGGFDVFQAGERVKASGRVIGVDMTPEMLAKARKNIEQYRQRTGLDNVEFRLGE 272

Query: 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210
            E LP P +  D  +S   I   PD  +  RE YRVLK GGK  +
Sbjct: 273 IECLPVPDNSVDVVLSNCVINLSPDKPKVWREIYRVLKSGGKVSV 317


>gi|304437464|ref|ZP_07397422.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369514|gb|EFM23181.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 208

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECKIVEGDAEDL 169
           V+D G G G      ++ VD  +VT LD S   + KA++          C+IV+G+ ++L
Sbjct: 49  VLDCGCGGGANIAVFLRMVDEGHVTGLDYSSVSVEKAREVNHAAIEAGRCEIVQGNVQEL 108

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGG 206
           PF     D   +  ++ +WP+  R   + +RVLK GG
Sbjct: 109 PFDDSQFDVVTAFETVYFWPEIARCFAQVHRVLKPGG 145


>gi|77464294|ref|YP_353798.1| phosphatidylethanolamine
           N-methyltransferase/phosphatidyl-N-methylethanolamine
           N-methyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|126463136|ref|YP_001044250.1| phosphatidylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221640178|ref|YP_002526440.1| phosphatidylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|332559183|ref|ZP_08413505.1| Phosphatidylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides WS8N]
 gi|429206156|ref|ZP_19197424.1| Phosphatidylethanolamine N-methyltransferase [Rhodobacter sp. AKP1]
 gi|77388712|gb|ABA79897.1| phosphatidylethanolamine N-methyltransferase /
           phosphatidyl-N-methylethanolamine N-methyltransferase
           [Rhodobacter sphaeroides 2.4.1]
 gi|126104800|gb|ABN77478.1| phosphatidyl-N-methylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221160959|gb|ACM01939.1| Phosphatidylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|332276895|gb|EGJ22210.1| Phosphatidylethanolamine N-methyltransferase [Rhodobacter
           sphaeroides WS8N]
 gi|428190877|gb|EKX59421.1| Phosphatidylethanolamine N-methyltransferase [Rhodobacter sp. AKP1]
          Length = 204

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 11/114 (9%)

Query: 105 ADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK------EPLKE 158
           A ++ R   V++VG GTG + L +  H  A  VT +D S   LA+A++K      EP+KE
Sbjct: 34  AHVNARGGRVLEVGVGTGLS-LPLYSHRVA--VTGIDFSHEMLARAREKVEEMGLEPVKE 90

Query: 159 CKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
            +  + DA +L FP +  D  V+   +   P+P+R + E  RV + GG+  I+ 
Sbjct: 91  LR--QMDARELDFPDETFDTVVAMFLVSVVPEPERVVSEMARVCRKGGEVVIVN 142


>gi|323493203|ref|ZP_08098333.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           brasiliensis LMG 20546]
 gi|323312550|gb|EGA65684.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
           brasiliensis LMG 20546]
          Length = 260

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 35/170 (20%)

Query: 114 VVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIV------EGDA 166
           V+D+GGGTG  T    + V D  +V + D +   L   + K  L++  IV      + +A
Sbjct: 76  VLDLGGGTGDLTAKFSRIVGDKGHVVLADINNSMLNVGRDK--LRDNGIVGNVHYVQANA 133

Query: 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI----------IGPVYP 216
           E+LPFP DY D    +  +    D  + +R  YRVLK GG+  +          +  +Y 
Sbjct: 134 EELPFPDDYFDAITISFCLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPVLEPLSKIYD 193

Query: 217 TFWLS----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250
           ++                   RY A+   + P +E       +AGF+  +
Sbjct: 194 SYSFHLLPKMGELVANDAESYRYLAESIRMHPNQETLKGMMDEAGFEQTK 243


>gi|168239993|ref|ZP_02664925.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449176|ref|YP_002044243.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|386590145|ref|YP_006086545.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. B182]
 gi|417363553|ref|ZP_12136728.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Hvittingfoss str. A4-620]
 gi|419727359|ref|ZP_14254327.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|419733661|ref|ZP_14260556.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|419741448|ref|ZP_14268143.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|419745436|ref|ZP_14272068.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|419749386|ref|ZP_14275868.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|421572804|ref|ZP_16018450.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|421577711|ref|ZP_16023299.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|421582301|ref|ZP_16027842.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|421584299|ref|ZP_16029807.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
 gi|194407480|gb|ACF67699.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205339771|gb|EDZ26535.1| methyltransferase, UbiE/COQ5 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|353599956|gb|EHC56005.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Hvittingfoss str. A4-620]
 gi|381291704|gb|EIC32937.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|381298848|gb|EIC39922.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|381300941|gb|EIC41997.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|381305515|gb|EIC46425.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|381311460|gb|EIC52277.1| UbiE/COQ5 family methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|383797189|gb|AFH44271.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. B182]
 gi|402515738|gb|EJW23152.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|402516299|gb|EJW23712.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|402516630|gb|EJW24041.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|402530817|gb|EJW38030.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
          Length = 256

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 96  DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQ 152
           D+   A   +D S+ N+L  D+G G G  +    +H  A +V   D S   L   A A +
Sbjct: 32  DLARLAQRLSDFSHANVL--DMGCGAGHASFVAAQH--AYSVVAYDLSASMLEVVAGAAE 87

Query: 153 KEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212
           +  L    + +G AE LPF     +  +S  S  +W D  + +RE YRVLK GG   I+ 
Sbjct: 88  ERHLSNITLRQGYAEKLPFEDASFEVVISRYSAHHWHDVGQALREVYRVLKPGGVLIIMD 147

Query: 213 PVYP 216
            + P
Sbjct: 148 VMSP 151


>gi|419219425|ref|ZP_13762384.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC8E]
 gi|378073347|gb|EHW35399.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli DEC8E]
          Length = 256

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEVRQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP 151


>gi|987103|emb|CAA60463.1| methyltransferase [Streptomyces rapamycinicus]
          Length = 211

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP 170
           V+++ GGTGF +  + +       T +D SP   A    K     +    +VEGD   LP
Sbjct: 45  VLELCGGTGFASRMLAERHSKVQATSIDLSPELTAVGPHKLASRGIDNVTLVEGDVSTLP 104

Query: 171 FPTDYADRYVSAGSIEYWPDPQR--GIREAYRVLKLGGKACII 211
           +P D  D  +SA  +   P   R   IRE+ RVLK GG+  I+
Sbjct: 105 YPDDSFDTVMSAFGLHEVPTAGRLSAIRESVRVLKPGGRFVIV 147


>gi|331695672|ref|YP_004331911.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326950361|gb|AEA24058.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190]
          Length = 287

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 114 VVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKI--VEGDAEDLP 170
           V+DVG G G  +L + + V    +VT +D S   +A+A+++   +   +  VEGDA DLP
Sbjct: 72  VLDVGCGFGLESLRLARAVTPGGSVTGVDASARFVAEAQRRAAAEGLTVTFVEGDAADLP 131

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217
           FP D  D   +   + Y PDP   + E  RV + GG+  +I P + T
Sbjct: 132 FPDDAFDVTRAERVLVYLPDPDAALAEMVRVTRPGGRIAVITPDFDT 178


>gi|237748541|ref|ZP_04579021.1| methyltransferase [Oxalobacter formigenes OXCC13]
 gi|229379903|gb|EEO29994.1| methyltransferase [Oxalobacter formigenes OXCC13]
          Length = 236

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLK 157
            +EPA   +    V++V  GT      +     A+ VT LD +P  L    K  +K  L 
Sbjct: 15  TIEPASTDS----VLEVAAGTCACGRSLAPF--AQTVTCLDTTPAMLEVGKKEAEKNRLN 68

Query: 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
               ++G AE+LPFP    D  +S  +  ++PD +   +E  RVLK GGK  +I    P
Sbjct: 69  NMVFIKGQAEELPFPDSSFDIVISRLAFHHFPDTRLPFQEMTRVLKTGGKLVLIDMEAP 127


>gi|183984467|ref|YP_001852758.1| methyltransferase [Mycobacterium marinum M]
 gi|183177793|gb|ACC42903.1| methyltransferase [Mycobacterium marinum M]
          Length = 248

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 14/185 (7%)

Query: 78  RFLSIVYDHVINP-------GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVK 130
           RF++ VY+ +  P       G  T   +  A     LS  + L+ DV  G G  T  +VK
Sbjct: 48  RFVATVYERLWRPAAFYLASGVTTRAEQHRAAAALHLSTAHRLL-DVACGPGNFTAPLVK 106

Query: 131 HVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189
            + A ++ + LD S   L +A       +   V GDA  LPF  +  D     G++   P
Sbjct: 107 QLPAGSLAVGLDISEPMLTRAVLDNSGPQTCYVRGDARMLPFDDETFDAVCCFGALYLMP 166

Query: 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD-----VWMLFPKEEEYIEWFQKA 244
           +P R  RE  RVL  GG+  I+          R+  D     + +    ++ +++ F  A
Sbjct: 167 EPFRIAREMVRVLGPGGRIAILTTYSGQRAPIRHALDAAAGAIGLTMFDQDSFVDLFSSA 226

Query: 245 GFKDV 249
           G  D+
Sbjct: 227 GLVDI 231


>gi|116628732|ref|YP_813904.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus gasseri ATCC 33323]
 gi|282852378|ref|ZP_06261720.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus gasseri 224-1]
 gi|116094314|gb|ABJ59466.1| demethylmenaquinone methyltransferase [Lactobacillus gasseri ATCC
           33323]
 gi|282556120|gb|EFB61740.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Lactobacillus gasseri 224-1]
          Length = 237

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 30/171 (17%)

Query: 115 VDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQL----AKAKQKEPLKECKIVEGDAEDL 169
           +D+  GTG  T+ + K V  + NV  LD +   L     K +Q+   KE ++ +GDA  L
Sbjct: 55  LDLCCGTGDITIALAKQVGPSGNVIGLDFNQEMLDLAEQKIRQQNLQKEIQLKQGDAMHL 114

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTF------WLS-- 221
           P+P    D       +   PD  + ++E YRVLK  GK  ++    PT       W S  
Sbjct: 115 PYPDQSFDIVTIGFGLRNVPDANQVLKEIYRVLKPTGKVGVLETSQPTNPLIKLGWKSYF 174

Query: 222 -----------------RYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255
                            +Y +     F   +   E   K GFK+VQ+ ++ 
Sbjct: 175 RLFPSFAKLLGANVSDYQYLSHTTAEFVSAQHLKEMLVKNGFKNVQVNKLN 225


>gi|422351273|ref|ZP_16432097.1| methyltransferase domain protein [Escherichia coli MS 117-3]
 gi|324020678|gb|EGB89897.1| methyltransferase domain protein [Escherichia coli MS 117-3]
          Length = 256

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 114 VVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQL---AKAKQKEPLKECKIVEGDAEDLP 170
           V+D+G G G  +    ++V    V   D S H L   A+A +   LK     +G AE LP
Sbjct: 48  VLDMGCGAGHASFVAAQNV--STVVAYDLSAHMLDVVAQAAEVRQLKNITTRQGYAESLP 105

Query: 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216
           F  +  D  +S  S  +W D    +RE  R+LK GG+  ++  + P
Sbjct: 106 FADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRMIVMDVMSP 151


>gi|288922462|ref|ZP_06416648.1| Methyltransferase type 11 [Frankia sp. EUN1f]
 gi|288346191|gb|EFC80534.1| Methyltransferase type 11 [Frankia sp. EUN1f]
          Length = 421

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDL 169
             +VVDVG GTG     +   V  + V + LD +P  L  A+ +   +  +++ GDA  L
Sbjct: 263 GAVVVDVGCGTGRALPPLRAAVGTRGVVLGLDVTPQMLEVARDQGRARPGELLLGDARRL 322

Query: 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213
           P  +   D   +AG + + PD + G+ E  RV + GG+  I  P
Sbjct: 323 PLASGRVDAVFAAGLVHHLPDIRAGLAELARVCRPGGRLAIFHP 366


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.138    0.432 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,995,137,205
Number of Sequences: 23463169
Number of extensions: 219628567
Number of successful extensions: 515967
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2929
Number of HSP's successfully gapped in prelim test: 7341
Number of HSP's that attempted gapping in prelim test: 508897
Number of HSP's gapped (non-prelim): 10906
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)