Query 022929
Match_columns 290
No_of_seqs 262 out of 2992
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 13:30:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hnr_A Probable methyltransfer 99.9 1.4E-22 4.6E-27 169.1 16.9 145 110-258 45-205 (220)
2 3kkz_A Uncharacterized protein 99.9 5.5E-22 1.9E-26 170.5 20.5 179 76-256 12-198 (267)
3 3f4k_A Putative methyltransfer 99.9 5.2E-22 1.8E-26 169.4 18.5 176 80-257 16-199 (257)
4 3ujc_A Phosphoethanolamine N-m 99.9 5.2E-22 1.8E-26 169.9 17.3 163 94-258 40-210 (266)
5 3dtn_A Putative methyltransfer 99.9 7.8E-22 2.7E-26 166.0 17.7 156 99-255 33-215 (234)
6 3l8d_A Methyltransferase; stru 99.9 5.7E-22 2E-26 167.5 16.3 143 110-254 53-200 (242)
7 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.4E-22 1.2E-26 171.3 15.0 142 109-252 69-243 (261)
8 2p7i_A Hypothetical protein; p 99.9 5.7E-22 1.9E-26 167.8 14.5 141 110-254 42-199 (250)
9 3dlc_A Putative S-adenosyl-L-m 99.9 1.4E-21 4.8E-26 162.3 16.3 160 94-256 29-205 (219)
10 3h2b_A SAM-dependent methyltra 99.9 1.1E-22 3.8E-27 167.6 9.2 141 111-256 42-184 (203)
11 3dh0_A SAM dependent methyltra 99.9 1.1E-21 3.8E-26 163.4 15.3 146 110-259 37-186 (219)
12 3bus_A REBM, methyltransferase 99.9 3.5E-21 1.2E-25 165.8 17.2 161 96-258 48-220 (273)
13 3bkw_A MLL3908 protein, S-aden 99.9 1.5E-21 5.3E-26 164.9 14.6 144 110-255 43-215 (243)
14 3ege_A Putative methyltransfer 99.9 1.5E-21 5.1E-26 167.4 14.7 169 76-255 4-179 (261)
15 3ou2_A SAM-dependent methyltra 99.9 2.1E-21 7E-26 161.4 15.0 179 74-258 12-209 (218)
16 1nkv_A Hypothetical protein YJ 99.9 1.2E-21 4.2E-26 167.0 14.0 162 91-255 18-188 (256)
17 3e23_A Uncharacterized protein 99.9 2.2E-21 7.5E-26 160.8 14.8 171 72-257 12-185 (211)
18 1vl5_A Unknown conserved prote 99.9 6E-21 2E-25 163.3 16.9 143 110-254 37-190 (260)
19 3g5l_A Putative S-adenosylmeth 99.9 4E-21 1.4E-25 163.7 14.8 166 110-278 44-245 (253)
20 2o57_A Putative sarcosine dime 99.9 5E-21 1.7E-25 166.9 15.7 158 97-255 66-235 (297)
21 3mgg_A Methyltransferase; NYSG 99.9 6.4E-21 2.2E-25 164.4 15.4 147 109-255 36-199 (276)
22 3pfg_A N-methyltransferase; N, 99.9 2.1E-21 7E-26 166.5 11.5 138 110-252 50-235 (263)
23 3dli_A Methyltransferase; PSI- 99.9 8.3E-21 2.8E-25 160.5 14.5 155 95-256 26-186 (240)
24 4fsd_A Arsenic methyltransfera 99.9 1.9E-20 6.4E-25 169.3 17.4 145 110-254 83-251 (383)
25 2ex4_A Adrenal gland protein A 99.9 2.8E-21 9.7E-26 163.5 11.2 156 96-255 65-226 (241)
26 1xxl_A YCGJ protein; structura 99.8 2.4E-20 8.3E-25 157.7 16.7 152 101-255 13-175 (239)
27 3hem_A Cyclopropane-fatty-acyl 99.8 3.1E-20 1.1E-24 162.4 17.8 157 99-260 62-249 (302)
28 3sm3_A SAM-dependent methyltra 99.8 2E-20 6.7E-25 157.1 15.9 147 110-258 30-211 (235)
29 2p35_A Trans-aconitate 2-methy 99.8 3.9E-20 1.3E-24 157.8 17.1 150 97-250 21-186 (259)
30 3i9f_A Putative type 11 methyl 99.8 5.1E-21 1.7E-25 153.2 10.8 137 110-259 17-153 (170)
31 3vc1_A Geranyl diphosphate 2-C 99.8 1.1E-20 3.7E-25 166.2 13.5 155 100-256 107-271 (312)
32 4htf_A S-adenosylmethionine-de 99.8 1.2E-20 3.9E-25 163.7 13.5 144 110-255 68-233 (285)
33 1vlm_A SAM-dependent methyltra 99.8 6.5E-20 2.2E-24 152.9 16.9 135 110-254 47-188 (219)
34 1y8c_A S-adenosylmethionine-de 99.8 7.8E-21 2.7E-25 160.6 10.9 175 77-254 3-225 (246)
35 3g07_A 7SK snRNA methylphospha 99.8 1.5E-20 5E-25 163.8 12.6 147 110-256 46-271 (292)
36 1kpg_A CFA synthase;, cyclopro 99.8 9.5E-20 3.3E-24 158.0 17.5 158 97-259 52-233 (287)
37 3e8s_A Putative SAM dependent 99.8 1.6E-20 5.5E-25 156.7 11.9 138 110-253 52-208 (227)
38 3ocj_A Putative exported prote 99.8 2E-20 6.8E-25 164.0 12.1 146 109-255 117-292 (305)
39 2yqz_A Hypothetical protein TT 99.8 7.2E-20 2.5E-24 156.4 15.2 143 109-253 38-195 (263)
40 3gu3_A Methyltransferase; alph 99.8 9.8E-20 3.4E-24 157.9 16.2 157 97-254 9-190 (284)
41 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.6E-20 9E-25 158.4 11.5 154 99-255 83-239 (254)
42 3ccf_A Cyclopropane-fatty-acyl 99.8 1.5E-19 5.2E-24 156.2 16.4 141 110-255 57-211 (279)
43 2a14_A Indolethylamine N-methy 99.8 1.5E-20 5.2E-25 161.3 10.0 167 109-279 54-261 (263)
44 1pjz_A Thiopurine S-methyltran 99.8 1.6E-20 5.5E-25 155.0 9.0 139 110-256 22-178 (203)
45 3lcc_A Putative methyl chlorid 99.8 1.8E-19 6.1E-24 151.8 15.2 140 110-258 66-211 (235)
46 2aot_A HMT, histamine N-methyl 99.8 4.3E-20 1.5E-24 160.8 11.5 152 100-252 42-219 (292)
47 2gs9_A Hypothetical protein TT 99.8 1.4E-19 5E-24 149.7 13.9 128 110-245 36-171 (211)
48 3bxo_A N,N-dimethyltransferase 99.8 2.7E-20 9.2E-25 156.8 9.6 138 110-252 40-225 (239)
49 2i62_A Nicotinamide N-methyltr 99.8 4.5E-20 1.6E-24 157.8 10.8 166 110-279 56-262 (265)
50 3jwh_A HEN1; methyltransferase 99.8 9E-20 3.1E-24 151.8 12.1 146 110-256 29-193 (217)
51 2fk8_A Methoxy mycolic acid sy 99.8 2E-19 7E-24 158.3 14.9 157 97-258 78-258 (318)
52 4a6d_A Hydroxyindole O-methylt 99.8 8.3E-19 2.8E-23 156.7 18.8 164 100-280 170-348 (353)
53 4e2x_A TCAB9; kijanose, tetron 99.8 8.4E-21 2.9E-25 173.3 6.0 226 14-256 26-255 (416)
54 3jwg_A HEN1, methyltransferase 99.8 1.1E-19 3.8E-24 151.3 12.0 146 110-256 29-193 (219)
55 2kw5_A SLR1183 protein; struct 99.8 1.5E-19 5E-24 148.7 12.0 149 110-263 30-180 (202)
56 3cc8_A Putative methyltransfer 99.8 4.5E-19 1.6E-23 148.1 15.1 142 110-257 32-188 (230)
57 3i53_A O-methyltransferase; CO 99.8 1.3E-18 4.4E-23 154.2 18.8 153 100-256 160-323 (332)
58 3ggd_A SAM-dependent methyltra 99.8 6.2E-19 2.1E-23 149.3 15.5 143 109-255 55-220 (245)
59 3gwz_A MMCR; methyltransferase 99.8 1.9E-18 6.5E-23 155.3 18.6 152 99-254 192-356 (369)
60 3d2l_A SAM-dependent methyltra 99.8 2.5E-19 8.6E-24 151.2 11.5 170 76-253 3-222 (243)
61 3g2m_A PCZA361.24; SAM-depende 99.8 1.1E-19 3.7E-24 158.8 9.5 175 76-256 50-276 (299)
62 2gb4_A Thiopurine S-methyltran 99.8 6.3E-19 2.2E-23 150.2 13.4 138 110-255 68-228 (252)
63 1qzz_A RDMB, aclacinomycin-10- 99.8 8.1E-19 2.8E-23 157.9 14.7 144 110-256 182-341 (374)
64 4hg2_A Methyltransferase type 99.8 4.3E-19 1.5E-23 151.6 11.9 128 77-215 11-138 (257)
65 2r3s_A Uncharacterized protein 99.8 1.3E-18 4.3E-23 154.2 15.3 144 110-255 165-324 (335)
66 2xvm_A Tellurite resistance pr 99.8 3.4E-19 1.2E-23 145.8 10.2 137 110-254 32-173 (199)
67 3bkx_A SAM-dependent methyltra 99.8 4.5E-19 1.5E-23 152.7 11.4 156 100-256 34-221 (275)
68 2g72_A Phenylethanolamine N-me 99.8 3.5E-19 1.2E-23 154.8 10.5 144 110-255 71-257 (289)
69 3dp7_A SAM-dependent methyltra 99.8 1.3E-18 4.6E-23 156.0 14.2 143 110-254 179-342 (363)
70 3mcz_A O-methyltransferase; ad 99.8 3.2E-18 1.1E-22 152.8 15.5 150 100-251 169-336 (352)
71 3reo_A (ISO)eugenol O-methyltr 99.8 8.3E-18 2.9E-22 151.1 18.3 151 99-256 192-357 (368)
72 2b3t_A Protein methyltransfera 99.8 5.5E-19 1.9E-23 152.6 10.1 165 69-253 70-262 (276)
73 1x19_A CRTF-related protein; m 99.8 9.2E-18 3.1E-22 150.3 17.8 152 100-255 181-349 (359)
74 3cgg_A SAM-dependent methyltra 99.8 9.8E-18 3.4E-22 136.3 16.2 127 110-254 46-175 (195)
75 2ip2_A Probable phenazine-spec 99.8 7.3E-18 2.5E-22 149.4 16.6 153 98-255 157-323 (334)
76 1ri5_A MRNA capping enzyme; me 99.8 6E-19 2.1E-23 153.4 9.0 148 110-258 64-254 (298)
77 3thr_A Glycine N-methyltransfe 99.8 3.5E-19 1.2E-23 154.9 7.5 119 93-214 41-177 (293)
78 3p9c_A Caffeic acid O-methyltr 99.8 7E-18 2.4E-22 151.3 15.9 150 100-256 191-355 (364)
79 1ve3_A Hypothetical protein PH 99.8 1.2E-18 4.2E-23 145.5 10.1 145 110-257 38-218 (227)
80 2zfu_A Nucleomethylin, cerebra 99.8 3.5E-18 1.2E-22 141.8 12.4 115 109-255 66-180 (215)
81 1tw3_A COMT, carminomycin 4-O- 99.8 7.3E-18 2.5E-22 150.9 14.5 144 110-256 183-341 (360)
82 3e05_A Precorrin-6Y C5,15-meth 99.8 5.9E-17 2E-21 133.4 18.8 139 95-254 26-167 (204)
83 3g5t_A Trans-aconitate 3-methy 99.8 3.7E-18 1.3E-22 149.0 12.1 146 110-256 36-211 (299)
84 2qe6_A Uncharacterized protein 99.8 1.9E-17 6.6E-22 142.7 16.3 139 110-250 77-238 (274)
85 3ofk_A Nodulation protein S; N 99.8 1.8E-17 6.2E-22 137.5 15.4 130 109-249 50-183 (216)
86 2avn_A Ubiquinone/menaquinone 99.7 4.4E-18 1.5E-22 145.6 11.0 138 110-255 54-214 (260)
87 3lst_A CALO1 methyltransferase 99.7 2.7E-17 9.2E-22 146.6 16.1 147 100-253 175-335 (348)
88 2p8j_A S-adenosylmethionine-de 99.7 9.5E-19 3.3E-23 144.4 6.0 143 110-253 23-182 (209)
89 1fbn_A MJ fibrillarin homologu 99.7 1.2E-16 4.1E-21 134.2 18.5 141 102-256 67-215 (230)
90 1fp1_D Isoliquiritigenin 2'-O- 99.7 1.1E-17 3.8E-22 150.4 12.6 148 100-254 199-360 (372)
91 1wzn_A SAM-dependent methyltra 99.7 7.8E-18 2.7E-22 143.1 10.1 101 110-213 41-146 (252)
92 3m70_A Tellurite resistance pr 99.7 1E-17 3.5E-22 145.2 10.6 137 110-254 120-260 (286)
93 1fp2_A Isoflavone O-methyltran 99.7 3.1E-17 1.1E-21 146.4 13.9 138 110-254 188-341 (352)
94 3m33_A Uncharacterized protein 99.7 2.2E-17 7.7E-22 138.2 11.9 135 91-254 31-167 (226)
95 2vdw_A Vaccinia virus capping 99.7 3.5E-18 1.2E-22 149.4 7.0 146 110-256 48-248 (302)
96 3q87_B N6 adenine specific DNA 99.7 7.2E-17 2.5E-21 129.3 14.1 138 87-254 3-149 (170)
97 1xdz_A Methyltransferase GIDB; 99.7 1.5E-16 5E-21 134.5 16.3 127 110-254 70-202 (240)
98 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.6E-16 5.6E-21 131.8 15.1 127 110-252 41-180 (214)
99 4df3_A Fibrillarin-like rRNA/T 99.7 3.1E-16 1E-20 131.1 15.9 143 104-256 72-219 (233)
100 3njr_A Precorrin-6Y methylase; 99.7 5.9E-16 2E-20 127.6 16.8 134 96-253 42-179 (204)
101 4dzr_A Protein-(glutamine-N5) 99.7 7.6E-18 2.6E-22 139.2 5.3 152 85-253 5-191 (215)
102 3hm2_A Precorrin-6Y C5,15-meth 99.7 7.9E-17 2.7E-21 129.3 10.8 136 96-253 12-152 (178)
103 3orh_A Guanidinoacetate N-meth 99.7 2.6E-18 9E-23 145.0 2.1 154 93-251 45-207 (236)
104 2fca_A TRNA (guanine-N(7)-)-me 99.7 3.9E-16 1.3E-20 129.6 15.1 127 110-252 38-177 (213)
105 3p2e_A 16S rRNA methylase; met 99.7 7E-17 2.4E-21 135.2 10.3 149 110-259 24-190 (225)
106 1zg3_A Isoflavanone 4'-O-methy 99.7 2.1E-16 7.1E-21 141.4 13.7 139 110-255 193-348 (358)
107 3mq2_A 16S rRNA methyltransfer 99.7 3.1E-17 1.1E-21 136.4 7.7 146 110-258 27-188 (218)
108 1zx0_A Guanidinoacetate N-meth 99.7 2.1E-17 7.2E-22 139.3 6.8 150 93-248 45-204 (236)
109 3evz_A Methyltransferase; NYSG 99.7 1.8E-16 6.2E-21 132.8 12.5 129 109-253 54-205 (230)
110 1yb2_A Hypothetical protein TA 99.7 2.5E-16 8.4E-21 135.9 13.5 130 102-254 103-237 (275)
111 3g89_A Ribosomal RNA small sub 99.7 2.5E-16 8.7E-21 133.8 13.2 128 110-255 80-213 (249)
112 1jsx_A Glucose-inhibited divis 99.7 9.8E-16 3.4E-20 126.1 15.0 139 92-254 45-188 (207)
113 2pxx_A Uncharacterized protein 99.7 3.6E-16 1.2E-20 129.1 12.3 106 109-215 41-162 (215)
114 2yxd_A Probable cobalt-precorr 99.7 1.8E-15 6.1E-20 121.7 15.0 133 94-252 20-155 (183)
115 3grz_A L11 mtase, ribosomal pr 99.7 3.5E-16 1.2E-20 128.8 10.5 124 110-255 60-186 (205)
116 1nt2_A Fibrillarin-like PRE-rR 99.7 2.4E-15 8.2E-20 124.6 15.5 133 109-256 56-197 (210)
117 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1.1E-15 3.7E-20 130.1 13.6 134 99-254 86-224 (258)
118 1dus_A MJ0882; hypothetical pr 99.7 1.3E-15 4.5E-20 123.5 12.9 135 98-253 41-181 (194)
119 1af7_A Chemotaxis receptor met 99.6 7.1E-16 2.4E-20 132.5 11.4 102 110-211 105-251 (274)
120 3bgv_A MRNA CAP guanine-N7 met 99.6 5E-16 1.7E-20 136.3 10.7 145 110-255 34-233 (313)
121 3htx_A HEN1; HEN1, small RNA m 99.6 1.3E-15 4.3E-20 145.7 13.9 159 96-257 708-900 (950)
122 1o54_A SAM-dependent O-methylt 99.6 2.4E-15 8.2E-20 129.7 14.5 124 109-254 111-239 (277)
123 1l3i_A Precorrin-6Y methyltran 99.6 1.5E-15 5.1E-20 123.0 12.0 136 92-250 16-156 (192)
124 3mb5_A SAM-dependent methyltra 99.6 3.3E-15 1.1E-19 127.1 14.6 136 97-255 81-223 (255)
125 3lpm_A Putative methyltransfer 99.6 2.3E-15 7.8E-20 128.6 13.2 128 110-255 49-202 (259)
126 2ozv_A Hypothetical protein AT 99.6 5.2E-15 1.8E-19 126.5 15.5 128 110-255 36-195 (260)
127 2ld4_A Anamorsin; methyltransf 99.6 4.7E-16 1.6E-20 125.0 8.4 120 109-254 11-134 (176)
128 2ipx_A RRNA 2'-O-methyltransfe 99.6 2.2E-15 7.6E-20 126.6 12.3 144 102-256 70-219 (233)
129 3mti_A RRNA methylase; SAM-dep 99.6 4.4E-16 1.5E-20 126.0 7.7 136 110-255 22-170 (185)
130 3iv6_A Putative Zn-dependent a 99.6 1.9E-15 6.5E-20 128.8 11.9 112 98-213 34-149 (261)
131 3bwc_A Spermidine synthase; SA 99.6 1.4E-15 4.7E-20 133.0 10.3 134 110-255 95-241 (304)
132 1i9g_A Hypothetical protein RV 99.6 6.1E-15 2.1E-19 127.2 14.1 136 97-254 87-230 (280)
133 3id6_C Fibrillarin-like rRNA/T 99.6 2.9E-14 9.7E-19 119.4 17.4 139 109-257 75-219 (232)
134 3dmg_A Probable ribosomal RNA 99.6 2.7E-15 9.3E-20 134.9 12.0 136 110-256 233-375 (381)
135 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3E-15 1E-19 126.1 11.3 104 110-213 46-169 (235)
136 1p91_A Ribosomal RNA large sub 99.6 1.3E-15 4.3E-20 130.7 9.2 133 110-255 85-217 (269)
137 2h00_A Methyltransferase 10 do 99.6 9.9E-17 3.4E-21 136.6 2.3 178 75-254 25-238 (254)
138 1nv8_A HEMK protein; class I a 99.6 5.9E-16 2E-20 134.1 7.1 143 65-212 79-249 (284)
139 3fpf_A Mtnas, putative unchara 99.6 6E-15 2.1E-19 127.1 13.2 100 109-213 121-223 (298)
140 3uwp_A Histone-lysine N-methyl 99.6 1.2E-15 4E-20 136.4 8.9 120 95-216 159-292 (438)
141 3eey_A Putative rRNA methylase 99.6 9.6E-16 3.3E-20 125.3 7.3 139 110-256 22-175 (197)
142 3p9n_A Possible methyltransfer 99.6 2.1E-15 7.2E-20 122.6 9.2 105 110-215 44-156 (189)
143 3opn_A Putative hemolysin; str 99.6 4.9E-16 1.7E-20 130.6 5.4 145 100-255 27-185 (232)
144 3giw_A Protein of unknown func 99.6 2E-15 6.8E-20 128.7 8.7 139 110-250 78-243 (277)
145 1g8a_A Fibrillarin-like PRE-rR 99.6 5.3E-14 1.8E-18 117.6 16.8 136 110-256 73-214 (227)
146 2nxc_A L11 mtase, ribosomal pr 99.6 1.4E-15 4.6E-20 129.7 7.2 124 110-255 120-245 (254)
147 3bzb_A Uncharacterized protein 99.6 1.8E-14 6E-19 124.6 14.2 147 94-253 64-236 (281)
148 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2.5E-15 8.7E-20 125.1 8.5 104 110-213 34-151 (218)
149 3hp7_A Hemolysin, putative; st 99.6 3.2E-15 1.1E-19 129.0 8.2 150 100-255 75-233 (291)
150 3r0q_C Probable protein argini 99.6 2.1E-15 7E-20 135.8 7.1 134 74-211 26-168 (376)
151 3q7e_A Protein arginine N-meth 99.6 2.2E-15 7.6E-20 134.3 7.0 99 110-210 66-171 (349)
152 3fzg_A 16S rRNA methylase; met 99.6 7.6E-16 2.6E-20 123.5 3.5 139 110-256 49-189 (200)
153 2fyt_A Protein arginine N-meth 99.6 3.6E-15 1.2E-19 132.4 8.1 110 97-209 52-168 (340)
154 3lbf_A Protein-L-isoaspartate 99.6 2E-14 6.9E-19 118.6 11.5 110 96-214 64-176 (210)
155 2frn_A Hypothetical protein PH 99.6 2.9E-14 1E-18 123.1 13.0 125 110-250 125-253 (278)
156 3kr9_A SAM-dependent methyltra 99.5 5.1E-14 1.7E-18 117.0 13.0 124 110-254 15-143 (225)
157 3lec_A NADB-rossmann superfami 99.5 3.6E-14 1.2E-18 118.2 12.0 126 109-254 20-149 (230)
158 1ej0_A FTSJ; methyltransferase 99.5 1.8E-14 6.2E-19 114.9 9.1 120 108-252 20-159 (180)
159 2esr_A Methyltransferase; stru 99.5 4.8E-15 1.6E-19 119.0 4.7 119 95-215 16-141 (177)
160 1vbf_A 231AA long hypothetical 99.5 5E-14 1.7E-18 117.9 11.1 111 96-215 57-168 (231)
161 3tma_A Methyltransferase; thum 99.5 1.5E-13 5E-18 122.7 14.7 143 91-254 185-339 (354)
162 3gnl_A Uncharacterized protein 99.5 6.5E-14 2.2E-18 117.6 11.6 126 109-254 20-149 (244)
163 2fhp_A Methylase, putative; al 99.5 1.2E-14 4.1E-19 117.5 6.7 121 93-215 27-157 (187)
164 4dcm_A Ribosomal RNA large sub 99.5 3.8E-14 1.3E-18 127.3 10.6 113 102-216 215-338 (375)
165 3u81_A Catechol O-methyltransf 99.5 6.1E-14 2.1E-18 116.8 10.6 105 110-215 58-173 (221)
166 1o9g_A RRNA methyltransferase; 99.5 3.3E-14 1.1E-18 120.7 9.1 105 110-214 51-216 (250)
167 3sso_A Methyltransferase; macr 99.5 1.5E-14 5.1E-19 129.0 6.8 130 76-214 183-326 (419)
168 1u2z_A Histone-lysine N-methyl 99.5 6.1E-14 2.1E-18 127.4 10.9 120 95-216 228-363 (433)
169 2yvl_A TRMI protein, hypotheti 99.5 2.1E-13 7.1E-18 115.2 13.6 130 100-254 82-215 (248)
170 2plw_A Ribosomal RNA methyltra 99.5 1.1E-13 3.7E-18 113.3 11.3 118 109-251 21-176 (201)
171 2ift_A Putative methylase HI07 99.5 1.5E-14 5.2E-19 118.9 5.9 104 110-215 53-166 (201)
172 2bm8_A Cephalosporin hydroxyla 99.5 5.5E-14 1.9E-18 118.4 9.4 122 110-248 81-213 (236)
173 3b3j_A Histone-arginine methyl 99.5 1.4E-14 4.9E-19 133.9 6.2 119 88-210 137-261 (480)
174 1dl5_A Protein-L-isoaspartate 99.5 1.1E-13 3.6E-18 121.8 11.1 111 96-213 62-176 (317)
175 1g6q_1 HnRNP arginine N-methyl 99.5 6.5E-14 2.2E-18 123.7 9.7 99 110-210 38-143 (328)
176 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 117.2 10.5 104 110-213 49-174 (246)
177 2y1w_A Histone-arginine methyl 99.5 5.3E-14 1.8E-18 125.3 8.6 113 95-211 36-154 (348)
178 4hc4_A Protein arginine N-meth 99.5 8.9E-14 3.1E-18 124.3 9.7 130 76-210 51-187 (376)
179 2yxe_A Protein-L-isoaspartate 99.5 1.6E-13 5.3E-18 113.6 10.5 112 96-214 64-179 (215)
180 2fpo_A Methylase YHHF; structu 99.5 5.1E-14 1.8E-18 115.7 7.4 102 110-213 54-161 (202)
181 1ws6_A Methyltransferase; stru 99.5 9.9E-15 3.4E-19 116.1 2.4 103 110-216 41-151 (171)
182 2igt_A SAM dependent methyltra 99.5 7.6E-14 2.6E-18 123.3 7.9 104 110-215 153-275 (332)
183 1ixk_A Methyltransferase; open 99.5 2E-13 6.8E-18 119.9 10.6 131 109-252 117-273 (315)
184 3tfw_A Putative O-methyltransf 99.5 2.4E-13 8.2E-18 115.3 10.7 104 110-216 63-174 (248)
185 1ne2_A Hypothetical protein TA 99.5 6.2E-13 2.1E-17 108.8 12.5 118 110-254 51-170 (200)
186 2pjd_A Ribosomal RNA small sub 99.5 6E-14 2.1E-18 124.7 6.6 104 110-215 196-306 (343)
187 3dr5_A Putative O-methyltransf 99.5 8.2E-14 2.8E-18 116.2 7.0 117 94-214 41-165 (221)
188 3tm4_A TRNA (guanine N2-)-meth 99.5 6.5E-13 2.2E-17 119.3 13.1 140 92-254 201-352 (373)
189 3ntv_A MW1564 protein; rossman 99.4 2.5E-13 8.5E-18 114.0 9.6 103 110-215 71-179 (232)
190 3gdh_A Trimethylguanosine synt 99.4 1.9E-15 6.4E-20 127.5 -3.6 139 110-255 78-220 (241)
191 2b25_A Hypothetical protein; s 99.4 4.9E-13 1.7E-17 118.4 11.7 150 101-256 97-283 (336)
192 1iy9_A Spermidine synthase; ro 99.4 2E-12 6.9E-17 111.3 14.8 132 110-254 75-218 (275)
193 3adn_A Spermidine synthase; am 99.4 4.5E-13 1.5E-17 116.3 10.6 103 110-212 83-198 (294)
194 2gpy_A O-methyltransferase; st 99.4 3.3E-13 1.1E-17 113.1 9.4 103 110-215 54-163 (233)
195 1jg1_A PIMT;, protein-L-isoasp 99.4 3.6E-13 1.2E-17 113.2 9.5 112 95-215 77-192 (235)
196 1i1n_A Protein-L-isoaspartate 99.4 5.3E-13 1.8E-17 111.3 10.2 100 109-214 76-184 (226)
197 3c3p_A Methyltransferase; NP_9 99.4 1.9E-13 6.5E-18 112.8 7.2 102 110-215 56-163 (210)
198 2qm3_A Predicted methyltransfe 99.4 2.7E-12 9.2E-17 115.3 15.2 127 110-253 172-308 (373)
199 2pt6_A Spermidine synthase; tr 99.4 1.7E-12 5.9E-17 114.1 13.4 103 110-212 116-230 (321)
200 2pbf_A Protein-L-isoaspartate 99.4 3.9E-13 1.3E-17 112.2 8.6 99 109-213 79-194 (227)
201 3duw_A OMT, O-methyltransferas 99.4 4.7E-13 1.6E-17 111.4 8.7 104 110-216 58-171 (223)
202 1r18_A Protein-L-isoaspartate( 99.4 3.4E-13 1.2E-17 112.7 7.8 98 109-213 83-195 (227)
203 1xj5_A Spermidine synthase 1; 99.4 5.6E-13 1.9E-17 117.7 9.5 103 110-212 120-235 (334)
204 1inl_A Spermidine synthase; be 99.4 2E-12 7E-17 112.4 12.7 132 110-254 90-234 (296)
205 2nyu_A Putative ribosomal RNA 99.4 1.3E-12 4.5E-17 106.3 10.7 98 109-214 21-147 (196)
206 4azs_A Methyltransferase WBDD; 99.4 1.2E-13 4E-18 130.7 4.8 104 110-215 66-176 (569)
207 3a27_A TYW2, uncharacterized p 99.4 9.3E-13 3.2E-17 113.3 9.9 102 109-215 118-222 (272)
208 3gjy_A Spermidine synthase; AP 99.4 9.2E-13 3.2E-17 114.8 9.9 102 112-213 91-201 (317)
209 1wy7_A Hypothetical protein PH 99.4 1.7E-11 5.7E-16 100.7 16.0 123 110-254 49-175 (207)
210 3lcv_B Sisomicin-gentamicin re 99.4 1.5E-12 5.3E-17 109.1 9.5 135 110-252 132-270 (281)
211 3tr6_A O-methyltransferase; ce 99.4 5.6E-13 1.9E-17 111.0 6.7 104 110-216 64-178 (225)
212 3dou_A Ribosomal RNA large sub 99.4 2.2E-12 7.4E-17 105.1 9.9 121 106-253 21-163 (191)
213 2yxl_A PH0851 protein, 450AA l 99.4 6.6E-12 2.3E-16 115.4 14.3 130 109-251 258-416 (450)
214 1uir_A Polyamine aminopropyltr 99.4 7.9E-13 2.7E-17 116.0 7.5 132 110-253 77-224 (314)
215 1sui_A Caffeoyl-COA O-methyltr 99.4 7.3E-13 2.5E-17 112.3 6.5 103 110-215 79-193 (247)
216 2b2c_A Spermidine synthase; be 99.4 7.1E-13 2.4E-17 116.1 6.6 103 110-212 108-222 (314)
217 2i7c_A Spermidine synthase; tr 99.3 1.1E-12 3.9E-17 113.3 7.4 104 110-213 78-193 (283)
218 3r3h_A O-methyltransferase, SA 99.3 2.1E-13 7.3E-18 115.3 2.3 103 110-215 60-173 (242)
219 2o07_A Spermidine synthase; st 99.3 9.3E-13 3.2E-17 115.0 6.5 103 110-212 95-209 (304)
220 2wa2_A Non-structural protein 99.3 9.9E-13 3.4E-17 113.1 6.3 99 109-214 81-195 (276)
221 2oxt_A Nucleoside-2'-O-methylt 99.3 1.2E-12 4E-17 112.0 6.7 100 108-214 72-187 (265)
222 3ajd_A Putative methyltransfer 99.3 2.1E-12 7E-17 111.2 7.8 106 110-215 83-214 (274)
223 3cbg_A O-methyltransferase; cy 99.3 1.3E-12 4.5E-17 109.6 6.3 103 110-215 72-185 (232)
224 1mjf_A Spermidine synthase; sp 99.3 1.9E-12 6.7E-17 111.7 7.4 101 110-212 75-193 (281)
225 2cmg_A Spermidine synthase; tr 99.3 2.6E-12 9E-17 109.7 7.9 93 110-212 72-171 (262)
226 2xyq_A Putative 2'-O-methyl tr 99.3 2.5E-12 8.5E-17 111.0 7.3 115 109-252 62-195 (290)
227 2hnk_A SAM-dependent O-methylt 99.3 4E-12 1.4E-16 107.0 8.2 103 110-215 60-184 (239)
228 2f8l_A Hypothetical protein LM 99.3 1.5E-11 5E-16 109.3 12.2 136 110-259 130-290 (344)
229 1zq9_A Probable dimethyladenos 99.3 5.1E-12 1.7E-16 109.3 8.7 86 95-185 14-103 (285)
230 3k6r_A Putative transferase PH 99.3 1.8E-11 6.2E-16 105.0 11.5 127 109-251 124-254 (278)
231 2avd_A Catechol-O-methyltransf 99.3 3.4E-12 1.2E-16 106.5 6.7 103 110-215 69-182 (229)
232 2b78_A Hypothetical protein SM 99.3 2.5E-12 8.6E-17 115.9 6.2 137 110-258 212-366 (385)
233 3c3y_A Pfomt, O-methyltransfer 99.3 5.1E-12 1.7E-16 106.4 6.8 103 110-215 70-184 (237)
234 1uwv_A 23S rRNA (uracil-5-)-me 99.3 6.6E-11 2.3E-15 108.2 14.4 137 94-254 271-414 (433)
235 3v97_A Ribosomal RNA large sub 99.2 3.5E-12 1.2E-16 123.1 4.7 124 110-251 539-679 (703)
236 4dmg_A Putative uncharacterize 99.2 1.6E-11 5.4E-16 110.7 8.5 132 110-254 214-357 (393)
237 3frh_A 16S rRNA methylase; met 99.2 4.6E-11 1.6E-15 99.3 10.3 136 110-256 105-243 (253)
238 3m6w_A RRNA methylase; rRNA me 99.2 1.3E-11 4.3E-16 113.2 7.5 129 110-252 101-257 (464)
239 1sqg_A SUN protein, FMU protei 99.2 3.2E-11 1.1E-15 110.2 10.2 107 109-215 245-377 (429)
240 2frx_A Hypothetical protein YE 99.2 6E-11 2.1E-15 109.5 12.0 106 110-215 117-249 (479)
241 2p41_A Type II methyltransfera 99.2 1E-11 3.6E-16 108.3 6.5 105 106-215 78-194 (305)
242 3c0k_A UPF0064 protein YCCW; P 99.2 2.8E-11 9.7E-16 109.5 9.2 132 110-253 220-369 (396)
243 1wxx_A TT1595, hypothetical pr 99.2 2.4E-11 8.2E-16 109.4 8.3 132 110-254 209-356 (382)
244 2yx1_A Hypothetical protein MJ 99.2 5.1E-11 1.7E-15 105.5 10.2 117 110-253 195-316 (336)
245 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.3E-11 4.6E-16 112.9 6.3 131 109-252 104-261 (456)
246 2as0_A Hypothetical protein PH 99.2 8.3E-12 2.8E-16 113.0 4.1 105 110-215 217-338 (396)
247 1qam_A ERMC' methyltransferase 99.2 2.5E-11 8.5E-16 102.6 6.1 84 95-182 16-101 (244)
248 2ih2_A Modification methylase 99.1 1.4E-10 4.8E-15 105.5 10.0 130 97-246 27-186 (421)
249 2jjq_A Uncharacterized RNA met 99.1 7.9E-10 2.7E-14 100.7 14.5 96 110-212 290-387 (425)
250 2h1r_A Dimethyladenosine trans 99.1 1.7E-10 5.9E-15 100.3 8.9 86 96-186 29-117 (299)
251 1yub_A Ermam, rRNA methyltrans 99.1 6.2E-13 2.1E-17 112.6 -7.4 109 99-211 19-144 (245)
252 3gru_A Dimethyladenosine trans 99.1 1.9E-10 6.4E-15 99.6 8.0 88 95-185 36-124 (295)
253 2efj_A 3,7-dimethylxanthine me 99.0 2.1E-09 7.2E-14 95.9 13.3 148 111-258 53-296 (384)
254 3k0b_A Predicted N6-adenine-sp 99.0 9.6E-10 3.3E-14 99.1 10.9 121 92-214 184-352 (393)
255 2qfm_A Spermine synthase; sper 99.0 1.1E-09 3.6E-14 96.7 10.5 104 110-214 188-316 (364)
256 3ldg_A Putative uncharacterize 99.0 1.7E-09 5.9E-14 97.0 11.8 122 91-214 176-345 (384)
257 3fut_A Dimethyladenosine trans 99.0 3.8E-10 1.3E-14 96.5 6.8 86 95-184 33-119 (271)
258 3tqs_A Ribosomal RNA small sub 99.0 7.9E-10 2.7E-14 93.8 8.2 84 95-182 15-103 (255)
259 3b5i_A S-adenosyl-L-methionine 99.0 4.4E-09 1.5E-13 93.7 13.2 149 110-258 52-302 (374)
260 3ldu_A Putative methylase; str 99.0 2.2E-09 7.6E-14 96.5 10.4 121 92-214 178-346 (385)
261 2okc_A Type I restriction enzy 99.0 1.3E-09 4.4E-14 100.0 8.7 116 96-213 158-308 (445)
262 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.5E-09 5.1E-14 97.2 8.5 110 95-214 200-328 (369)
263 3ftd_A Dimethyladenosine trans 98.9 4.8E-09 1.6E-13 88.7 10.3 76 95-173 17-92 (249)
264 1m6y_A S-adenosyl-methyltransf 98.9 9.8E-10 3.4E-14 95.4 4.6 86 97-183 14-106 (301)
265 2b9e_A NOL1/NOP2/SUN domain fa 98.9 3E-08 1E-12 86.4 13.7 106 109-215 101-237 (309)
266 2dul_A N(2),N(2)-dimethylguano 98.9 1.6E-09 5.5E-14 97.1 5.5 99 110-212 47-164 (378)
267 1m6e_X S-adenosyl-L-methionnin 98.9 5.6E-09 1.9E-13 92.4 8.3 149 110-258 51-284 (359)
268 3axs_A Probable N(2),N(2)-dime 98.8 2.4E-09 8.3E-14 96.1 5.1 99 110-212 52-158 (392)
269 3uzu_A Ribosomal RNA small sub 98.8 4.7E-09 1.6E-13 90.2 6.0 76 96-173 29-106 (279)
270 3o4f_A Spermidine synthase; am 98.8 4.5E-08 1.5E-12 84.1 11.7 103 110-212 83-198 (294)
271 3v97_A Ribosomal RNA large sub 98.7 2.4E-08 8.3E-13 96.3 9.5 122 91-213 172-348 (703)
272 2qy6_A UPF0209 protein YFCK; s 98.7 7.8E-09 2.7E-13 87.7 5.3 127 110-256 60-237 (257)
273 3evf_A RNA-directed RNA polyme 98.7 9.4E-08 3.2E-12 80.6 10.6 107 107-214 71-186 (277)
274 1qyr_A KSGA, high level kasuga 98.7 1.3E-08 4.5E-13 86.1 4.8 85 96-183 8-98 (252)
275 2ar0_A M.ecoki, type I restric 98.6 3.4E-08 1.2E-12 92.6 6.6 138 110-259 169-347 (541)
276 3lkd_A Type I restriction-modi 98.6 9E-07 3.1E-11 82.8 14.7 139 109-259 220-393 (542)
277 2r6z_A UPF0341 protein in RSP 98.6 1.1E-08 3.8E-13 86.9 1.4 76 110-187 83-173 (258)
278 3ua3_A Protein arginine N-meth 98.6 2.7E-08 9.4E-13 94.1 3.9 100 110-209 409-531 (745)
279 4gqb_A Protein arginine N-meth 98.5 2.2E-07 7.4E-12 87.9 9.2 97 110-209 357-464 (637)
280 3ll7_A Putative methyltransfer 98.5 4.7E-08 1.6E-12 88.0 4.4 71 110-182 93-170 (410)
281 3khk_A Type I restriction-modi 98.5 1.1E-06 3.9E-11 82.2 13.8 137 112-259 246-431 (544)
282 3cvo_A Methyltransferase-like 98.5 2.2E-06 7.4E-11 69.7 12.8 95 110-212 30-154 (202)
283 2oyr_A UPF0341 protein YHIQ; a 98.5 1.4E-07 4.7E-12 79.9 5.3 92 112-206 90-194 (258)
284 3gcz_A Polyprotein; flavivirus 98.5 1.3E-07 4.4E-12 80.0 4.9 106 108-214 88-203 (282)
285 2k4m_A TR8_protein, UPF0146 pr 98.4 2.1E-07 7E-12 70.9 4.0 84 110-212 35-121 (153)
286 4auk_A Ribosomal RNA large sub 98.4 2.6E-06 8.9E-11 75.2 11.1 121 109-247 210-333 (375)
287 1wg8_A Predicted S-adenosylmet 98.3 8.5E-07 2.9E-11 75.3 7.1 80 98-181 11-95 (285)
288 3eld_A Methyltransferase; flav 98.3 1.5E-06 5E-11 74.0 7.6 112 101-214 73-193 (300)
289 3s1s_A Restriction endonucleas 98.3 1.8E-06 6.2E-11 83.0 9.2 136 110-256 321-498 (878)
290 3c6k_A Spermine synthase; sper 98.2 5.6E-06 1.9E-10 73.3 9.1 102 110-212 205-331 (381)
291 4fzv_A Putative methyltransfer 98.2 2.5E-06 8.5E-11 75.6 6.7 108 109-216 147-288 (359)
292 2vz8_A Fatty acid synthase; tr 98.1 2.6E-07 8.8E-12 100.1 -1.7 142 110-252 1240-1393(2512)
293 3lkz_A Non-structural protein 98.1 1.6E-05 5.4E-10 67.4 9.3 111 100-214 85-206 (321)
294 3p8z_A Mtase, non-structural p 98.1 1.5E-05 5E-10 65.4 8.4 110 100-214 69-188 (267)
295 2px2_A Genome polyprotein [con 98.0 2E-05 6.7E-10 65.7 9.1 103 107-214 70-185 (269)
296 2wk1_A NOVP; transferase, O-me 98.0 3E-05 1E-09 66.3 9.1 122 110-247 106-265 (282)
297 2zig_A TTHA0409, putative modi 97.8 3.9E-05 1.3E-09 66.3 6.6 60 91-154 218-277 (297)
298 3ufb_A Type I restriction-modi 97.7 0.00019 6.4E-09 67.0 10.8 151 96-259 204-397 (530)
299 3tka_A Ribosomal RNA small sub 97.7 3.4E-05 1.2E-09 67.0 5.3 80 100-181 48-134 (347)
300 1rjd_A PPM1P, carboxy methyl t 97.7 0.00019 6.7E-09 62.9 9.7 142 110-255 97-287 (334)
301 1i4w_A Mitochondrial replicati 97.6 0.00013 4.6E-09 64.3 8.0 75 95-169 38-117 (353)
302 3vyw_A MNMC2; tRNA wobble urid 97.5 0.0019 6.5E-08 55.5 12.8 127 110-257 96-251 (308)
303 1g60_A Adenine-specific methyl 97.3 0.00029 1E-08 59.5 5.8 60 92-155 196-255 (260)
304 2oo3_A Protein involved in cat 97.2 0.00083 2.9E-08 57.0 7.4 128 110-253 91-225 (283)
305 3iei_A Leucine carboxyl methyl 97.2 0.018 6.1E-07 50.3 15.9 147 110-258 90-285 (334)
306 2uyo_A Hypothetical protein ML 97.0 0.0051 1.8E-07 53.2 10.7 140 112-255 104-279 (310)
307 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0023 7.8E-08 54.3 8.0 114 110-253 109-240 (344)
308 3g7u_A Cytosine-specific methy 96.9 0.026 9E-07 50.1 14.9 130 112-256 3-153 (376)
309 1g55_A DNA cytosine methyltran 96.8 0.019 6.6E-07 50.3 12.5 131 112-258 3-152 (343)
310 3qv2_A 5-cytosine DNA methyltr 96.7 0.045 1.5E-06 47.6 14.3 150 110-277 9-179 (327)
311 4h0n_A DNMT2; SAH binding, tra 96.1 0.08 2.8E-06 46.1 12.2 147 112-277 4-168 (333)
312 2c7p_A Modification methylase 96.0 0.23 8E-06 43.0 15.1 132 110-257 10-155 (327)
313 3pvc_A TRNA 5-methylaminomethy 96.0 0.02 6.8E-07 55.0 8.9 127 110-257 58-236 (689)
314 2dph_A Formaldehyde dismutase; 96.0 0.021 7E-07 51.1 8.2 102 109-214 184-301 (398)
315 3ps9_A TRNA 5-methylaminomethy 95.9 0.017 6E-07 55.3 7.7 126 110-256 66-243 (676)
316 1kol_A Formaldehyde dehydrogen 95.8 0.055 1.9E-06 48.2 10.5 101 109-213 184-301 (398)
317 1f8f_A Benzyl alcohol dehydrog 95.8 0.033 1.1E-06 49.2 8.8 96 109-213 189-290 (371)
318 1boo_A Protein (N-4 cytosine-s 95.7 0.019 6.6E-07 49.9 6.8 60 92-155 236-295 (323)
319 3m6i_A L-arabinitol 4-dehydrog 95.6 0.067 2.3E-06 47.0 10.0 98 109-213 178-284 (363)
320 2py6_A Methyltransferase FKBM; 95.6 0.014 4.9E-07 52.5 5.4 46 109-154 225-272 (409)
321 4ej6_A Putative zinc-binding d 95.3 0.1 3.4E-06 46.1 10.0 97 109-214 181-286 (370)
322 1eg2_A Modification methylase 95.3 0.031 1.1E-06 48.5 6.4 60 92-155 226-288 (319)
323 3s2e_A Zinc-containing alcohol 95.2 0.0078 2.7E-07 52.6 2.5 96 109-214 165-265 (340)
324 1pqw_A Polyketide synthase; ro 95.2 0.12 4E-06 41.1 9.3 92 109-213 37-138 (198)
325 1pl8_A Human sorbitol dehydrog 95.1 0.082 2.8E-06 46.3 8.9 96 109-213 170-274 (356)
326 1e3j_A NADP(H)-dependent ketos 95.1 0.19 6.3E-06 43.9 10.9 95 109-213 167-272 (352)
327 4dvj_A Putative zinc-dependent 95.0 0.12 4E-06 45.5 9.6 93 110-212 171-270 (363)
328 3two_A Mannitol dehydrogenase; 95.0 0.026 8.9E-07 49.4 5.3 93 109-215 175-268 (348)
329 3ip1_A Alcohol dehydrogenase, 95.0 0.24 8.3E-06 44.1 11.8 98 109-214 212-320 (404)
330 3fpc_A NADP-dependent alcohol 94.9 0.077 2.6E-06 46.4 8.0 97 109-214 165-268 (352)
331 3uog_A Alcohol dehydrogenase; 94.8 0.13 4.3E-06 45.2 9.3 95 109-214 188-289 (363)
332 3jv7_A ADH-A; dehydrogenase, n 94.8 0.068 2.3E-06 46.6 7.3 96 109-214 170-272 (345)
333 2zwa_A Leucine carboxyl methyl 94.6 0.39 1.3E-05 46.1 12.7 146 110-258 107-313 (695)
334 1uuf_A YAHK, zinc-type alcohol 94.5 0.02 6.8E-07 50.7 3.2 92 109-213 193-289 (369)
335 3tos_A CALS11; methyltransfera 94.5 0.11 3.8E-06 43.4 7.5 125 111-249 70-242 (257)
336 4eez_A Alcohol dehydrogenase 1 94.3 0.065 2.2E-06 46.7 6.0 97 109-214 162-265 (348)
337 4a2c_A Galactitol-1-phosphate 94.2 0.061 2.1E-06 46.8 5.7 98 109-215 159-263 (346)
338 3goh_A Alcohol dehydrogenase, 94.2 0.064 2.2E-06 46.1 5.7 88 109-212 141-229 (315)
339 1rjw_A ADH-HT, alcohol dehydro 94.0 0.22 7.6E-06 43.2 8.8 94 109-214 163-263 (339)
340 3ubt_Y Modification methylase 93.9 1.2 4E-05 38.3 13.4 132 112-258 1-146 (331)
341 1zkd_A DUF185; NESG, RPR58, st 93.9 0.27 9.1E-06 43.7 9.1 76 110-189 80-163 (387)
342 2h6e_A ADH-4, D-arabinose 1-de 93.9 0.021 7E-07 50.0 1.9 94 110-213 170-270 (344)
343 1v3u_A Leukotriene B4 12- hydr 93.9 0.31 1.1E-05 42.1 9.5 92 109-213 144-245 (333)
344 3qwb_A Probable quinone oxidor 93.8 0.31 1.1E-05 42.1 9.3 94 109-213 147-248 (334)
345 3uko_A Alcohol dehydrogenase c 93.8 0.038 1.3E-06 48.9 3.4 96 109-213 192-296 (378)
346 3fwz_A Inner membrane protein 93.7 1.2 4E-05 33.1 11.4 91 111-211 7-104 (140)
347 4b7c_A Probable oxidoreductase 93.7 0.23 7.9E-06 42.9 8.3 95 109-213 148-249 (336)
348 1p0f_A NADP-dependent alcohol 93.5 0.29 1E-05 43.0 8.8 96 109-213 190-294 (373)
349 2j3h_A NADP-dependent oxidored 93.5 0.28 9.7E-06 42.5 8.6 92 109-212 154-255 (345)
350 1vj0_A Alcohol dehydrogenase, 93.4 0.17 5.8E-06 44.7 7.1 97 109-214 194-300 (380)
351 1cdo_A Alcohol dehydrogenase; 93.3 0.33 1.1E-05 42.7 8.7 96 109-213 191-295 (374)
352 1e3i_A Alcohol dehydrogenase, 93.2 0.065 2.2E-06 47.3 4.0 96 109-213 194-298 (376)
353 2jhf_A Alcohol dehydrogenase E 93.2 0.42 1.4E-05 42.0 9.3 96 109-213 190-294 (374)
354 2d8a_A PH0655, probable L-thre 93.2 0.37 1.3E-05 41.9 8.8 94 110-213 167-268 (348)
355 2fzw_A Alcohol dehydrogenase c 93.1 0.37 1.3E-05 42.3 8.8 96 109-213 189-293 (373)
356 2b5w_A Glucose dehydrogenase; 93.0 0.3 1E-05 42.7 8.0 89 112-213 174-274 (357)
357 3fbg_A Putative arginate lyase 92.9 0.4 1.4E-05 41.7 8.7 92 110-212 150-248 (346)
358 2eih_A Alcohol dehydrogenase; 92.9 0.82 2.8E-05 39.6 10.6 92 109-213 165-266 (343)
359 2qrv_A DNA (cytosine-5)-methyl 92.8 0.3 1E-05 41.7 7.4 69 110-182 15-90 (295)
360 3gms_A Putative NADPH:quinone 92.7 0.2 6.7E-06 43.5 6.4 94 109-213 143-244 (340)
361 3jyn_A Quinone oxidoreductase; 92.7 0.43 1.5E-05 41.1 8.5 94 109-213 139-240 (325)
362 1jvb_A NAD(H)-dependent alcoho 92.6 0.34 1.2E-05 42.1 7.7 96 109-213 169-272 (347)
363 1yb5_A Quinone oxidoreductase; 92.5 0.81 2.8E-05 39.8 10.1 92 109-213 169-270 (351)
364 3me5_A Cytosine-specific methy 92.2 2.2 7.6E-05 39.0 12.8 58 111-169 88-146 (482)
365 4eye_A Probable oxidoreductase 92.2 0.38 1.3E-05 41.8 7.5 92 109-212 158-257 (342)
366 2c0c_A Zinc binding alcohol de 92.1 0.57 2E-05 41.0 8.6 94 109-213 162-262 (362)
367 2hcy_A Alcohol dehydrogenase 1 92.0 0.46 1.6E-05 41.3 7.9 94 109-214 168-271 (347)
368 1piw_A Hypothetical zinc-type 91.7 0.065 2.2E-06 47.1 2.0 96 109-213 178-277 (360)
369 2j8z_A Quinone oxidoreductase; 91.7 1.1 3.8E-05 39.0 9.9 92 109-213 161-262 (354)
370 1qor_A Quinone oxidoreductase; 91.6 0.71 2.4E-05 39.6 8.6 92 109-213 139-240 (327)
371 2zig_A TTHA0409, putative modi 91.6 0.099 3.4E-06 44.7 3.0 94 158-254 21-136 (297)
372 2cf5_A Atccad5, CAD, cinnamyl 91.5 0.088 3E-06 46.2 2.6 94 110-213 180-276 (357)
373 2zb4_A Prostaglandin reductase 91.4 0.96 3.3E-05 39.3 9.3 92 109-212 157-260 (357)
374 3nx4_A Putative oxidoreductase 91.2 0.21 7E-06 43.0 4.7 91 113-214 149-243 (324)
375 2cdc_A Glucose dehydrogenase g 91.1 0.67 2.3E-05 40.6 8.0 89 111-214 181-280 (366)
376 1wly_A CAAR, 2-haloacrylate re 91.0 1.3 4.5E-05 38.0 9.6 92 109-213 144-245 (333)
377 2dq4_A L-threonine 3-dehydroge 90.9 0.25 8.4E-06 42.9 4.9 91 110-213 164-263 (343)
378 3krt_A Crotonyl COA reductase; 90.7 1.1 3.7E-05 40.5 9.2 94 109-213 227-345 (456)
379 1xa0_A Putative NADPH dependen 90.3 0.2 6.8E-06 43.2 3.7 93 110-213 148-247 (328)
380 1iz0_A Quinone oxidoreductase; 90.2 0.07 2.4E-06 45.6 0.7 90 109-212 124-218 (302)
381 4dup_A Quinone oxidoreductase; 90.1 1.2 4.1E-05 38.7 8.6 94 109-213 166-266 (353)
382 3swr_A DNA (cytosine-5)-methyl 90.1 12 0.0004 37.4 16.4 53 110-166 539-593 (1002)
383 2vn8_A Reticulon-4-interacting 90.1 0.16 5.4E-06 44.8 2.9 95 109-213 182-281 (375)
384 4a0s_A Octenoyl-COA reductase/ 89.8 0.87 3E-05 41.0 7.7 94 109-213 219-337 (447)
385 2vhw_A Alanine dehydrogenase; 89.7 0.23 7.8E-06 44.0 3.6 101 110-212 167-268 (377)
386 1yqd_A Sinapyl alcohol dehydro 89.6 0.17 5.9E-06 44.5 2.7 94 110-213 187-283 (366)
387 1lss_A TRK system potassium up 89.6 4.5 0.00016 29.2 11.8 91 111-210 4-100 (140)
388 3tqh_A Quinone oxidoreductase; 89.4 1.2 4E-05 38.1 8.0 93 109-213 151-246 (321)
389 1boo_A Protein (N-4 cytosine-s 89.3 0.74 2.5E-05 39.7 6.6 89 158-254 14-120 (323)
390 2eez_A Alanine dehydrogenase; 89.1 0.23 7.9E-06 43.8 3.2 101 110-212 165-266 (369)
391 3llv_A Exopolyphosphatase-rela 89.1 1.3 4.3E-05 32.7 7.0 66 111-182 6-77 (141)
392 1tt7_A YHFP; alcohol dehydroge 88.4 0.25 8.6E-06 42.6 2.9 93 110-213 149-248 (330)
393 3gaz_A Alcohol dehydrogenase s 88.0 0.91 3.1E-05 39.3 6.3 91 109-213 149-247 (343)
394 4e21_A 6-phosphogluconate dehy 87.6 2.3 7.9E-05 37.2 8.6 121 110-255 21-143 (358)
395 4dio_A NAD(P) transhydrogenase 87.2 1.1 3.8E-05 39.9 6.4 97 110-211 189-311 (405)
396 4eso_A Putative oxidoreductase 86.9 2 6.9E-05 35.3 7.6 100 110-212 7-138 (255)
397 1pjc_A Protein (L-alanine dehy 86.6 0.33 1.1E-05 42.7 2.6 101 110-212 166-267 (361)
398 4ft4_B DNA (cytosine-5)-methyl 86.4 25 0.00084 34.0 17.2 46 110-155 211-261 (784)
399 3iht_A S-adenosyl-L-methionine 86.2 0.84 2.9E-05 34.8 4.2 99 111-213 41-148 (174)
400 3c85_A Putative glutathione-re 85.8 3.1 0.00011 32.1 7.8 94 110-212 38-139 (183)
401 3ius_A Uncharacterized conserv 85.5 11 0.00037 31.0 11.6 92 112-211 6-101 (286)
402 4fgs_A Probable dehydrogenase 85.5 3.3 0.00011 34.7 8.2 100 110-212 28-159 (273)
403 3gqv_A Enoyl reductase; medium 85.4 3.7 0.00013 35.9 8.9 93 109-212 163-263 (371)
404 4f3n_A Uncharacterized ACR, CO 84.7 0.42 1.4E-05 43.0 2.3 42 111-152 138-184 (432)
405 3l9w_A Glutathione-regulated p 84.6 3.3 0.00011 37.0 8.2 92 110-211 3-101 (413)
406 3p2y_A Alanine dehydrogenase/p 83.3 0.4 1.4E-05 42.4 1.6 97 110-211 183-301 (381)
407 1l7d_A Nicotinamide nucleotide 83.2 0.76 2.6E-05 40.7 3.4 42 110-152 171-213 (384)
408 3g0o_A 3-hydroxyisobutyrate de 83.1 8.4 0.00029 32.5 9.9 88 111-212 7-102 (303)
409 4dcm_A Ribosomal RNA large sub 82.9 3.4 0.00012 36.3 7.5 96 110-214 38-138 (375)
410 3ce6_A Adenosylhomocysteinase; 82.6 3.6 0.00012 37.6 7.7 90 109-213 272-362 (494)
411 3ggo_A Prephenate dehydrogenas 82.4 10 0.00035 32.3 10.2 91 111-211 33-127 (314)
412 3oig_A Enoyl-[acyl-carrier-pro 82.2 17 0.00056 29.7 11.2 101 110-212 6-147 (266)
413 3e8x_A Putative NAD-dependent 82.2 17 0.00059 28.8 11.6 76 110-190 20-99 (236)
414 2g1u_A Hypothetical protein TM 82.0 5.5 0.00019 29.8 7.5 96 110-212 18-118 (155)
415 1x13_A NAD(P) transhydrogenase 81.9 0.57 1.9E-05 41.8 2.0 42 110-152 171-213 (401)
416 4a27_A Synaptic vesicle membra 81.4 2.4 8.3E-05 36.6 5.9 92 109-213 141-239 (349)
417 3av4_A DNA (cytosine-5)-methyl 80.4 28 0.00095 35.9 13.8 52 110-165 850-903 (1330)
418 3pi7_A NADH oxidoreductase; gr 79.8 2.4 8.3E-05 36.6 5.4 90 112-212 166-263 (349)
419 2hwk_A Helicase NSP2; rossman 79.4 7.9 0.00027 32.6 7.9 80 158-253 189-280 (320)
420 3c24_A Putative oxidoreductase 78.8 12 0.00042 31.1 9.3 84 112-209 12-98 (286)
421 2f1k_A Prephenate dehydrogenas 78.5 14 0.00049 30.3 9.7 85 113-209 2-88 (279)
422 3gg2_A Sugar dehydrogenase, UD 78.3 7 0.00024 35.3 8.1 96 112-213 3-123 (450)
423 3grk_A Enoyl-(acyl-carrier-pro 77.7 14 0.00048 30.8 9.5 101 110-212 30-169 (293)
424 1id1_A Putative potassium chan 76.8 15 0.00051 27.2 8.5 96 111-212 3-105 (153)
425 3ojo_A CAP5O; rossmann fold, c 76.7 41 0.0014 30.0 14.2 97 110-216 10-133 (431)
426 3guy_A Short-chain dehydrogena 76.1 27 0.00093 27.6 11.4 70 113-185 3-82 (230)
427 3pxx_A Carveol dehydrogenase; 75.7 19 0.00064 29.6 9.6 101 110-212 9-153 (287)
428 2ew2_A 2-dehydropantoate 2-red 75.4 30 0.001 28.7 11.0 92 112-212 4-108 (316)
429 2h78_A Hibadh, 3-hydroxyisobut 75.0 13 0.00046 31.0 8.6 110 112-251 4-121 (302)
430 1g60_A Adenine-specific methyl 74.9 3.5 0.00012 34.1 4.8 46 192-254 54-99 (260)
431 3ijr_A Oxidoreductase, short c 74.5 24 0.00083 29.3 10.1 101 110-212 46-182 (291)
432 2km1_A Protein DRE2; yeast, an 74.4 3.4 0.00012 30.7 4.0 41 170-210 54-96 (136)
433 2gdz_A NAD+-dependent 15-hydro 74.4 15 0.00052 29.9 8.7 80 110-191 6-102 (267)
434 1h2b_A Alcohol dehydrogenase; 74.3 5 0.00017 34.8 5.8 95 109-213 185-286 (359)
435 4g65_A TRK system potassium up 73.7 5.7 0.0002 35.9 6.2 67 110-181 2-74 (461)
436 1zcj_A Peroxisomal bifunctiona 73.4 9.9 0.00034 34.4 7.7 93 111-210 37-148 (463)
437 4ezb_A Uncharacterized conserv 73.3 28 0.00094 29.5 10.2 114 112-255 25-149 (317)
438 2rir_A Dipicolinate synthase, 73.2 18 0.00063 30.3 9.0 90 110-213 156-247 (300)
439 3b1f_A Putative prephenate deh 73.1 32 0.0011 28.4 10.5 89 112-209 7-98 (290)
440 3ic5_A Putative saccharopine d 73.1 16 0.00055 25.1 7.4 69 110-183 4-77 (118)
441 3l4b_C TRKA K+ channel protien 73.0 23 0.0008 27.9 9.2 89 113-211 2-98 (218)
442 1sby_A Alcohol dehydrogenase; 72.8 35 0.0012 27.4 11.6 102 110-212 4-137 (254)
443 4gwg_A 6-phosphogluconate dehy 72.5 14 0.00048 33.6 8.5 123 112-254 5-130 (484)
444 4dll_A 2-hydroxy-3-oxopropiona 72.2 14 0.00049 31.3 8.1 112 110-251 30-148 (320)
445 1zsy_A Mitochondrial 2-enoyl t 72.1 4.3 0.00015 35.1 4.9 93 109-212 166-270 (357)
446 4g81_D Putative hexonate dehyd 71.8 18 0.00061 29.8 8.3 75 110-186 8-97 (255)
447 2o3j_A UDP-glucose 6-dehydroge 71.3 22 0.00076 32.2 9.6 100 112-215 10-138 (481)
448 2cvz_A Dehydrogenase, 3-hydrox 71.3 12 0.0004 31.0 7.3 85 113-211 3-89 (289)
449 3d4o_A Dipicolinate synthase s 71.2 16 0.00056 30.5 8.2 89 110-212 154-244 (293)
450 1mv8_A GMD, GDP-mannose 6-dehy 71.1 22 0.00075 31.7 9.4 93 113-211 2-122 (436)
451 1gu7_A Enoyl-[acyl-carrier-pro 70.7 2.3 7.7E-05 37.0 2.7 94 109-213 165-276 (364)
452 4fs3_A Enoyl-[acyl-carrier-pro 70.5 24 0.00081 28.7 8.9 73 110-184 5-95 (256)
453 3ged_A Short-chain dehydrogena 69.5 19 0.00065 29.5 8.0 69 112-184 3-84 (247)
454 3ew7_A LMO0794 protein; Q8Y8U8 69.4 37 0.0013 26.2 9.9 94 113-212 2-102 (221)
455 3zwc_A Peroxisomal bifunctiona 69.2 60 0.0021 31.2 12.4 97 111-214 316-431 (742)
456 4hp8_A 2-deoxy-D-gluconate 3-d 69.1 32 0.0011 28.1 9.3 72 110-185 8-89 (247)
457 3i83_A 2-dehydropantoate 2-red 68.7 34 0.0012 28.9 9.8 94 112-215 3-108 (320)
458 3gvp_A Adenosylhomocysteinase 68.6 22 0.00074 31.9 8.5 89 110-213 219-308 (435)
459 4a7p_A UDP-glucose dehydrogena 68.3 16 0.00055 32.9 7.8 100 110-215 7-132 (446)
460 3is3_A 17BETA-hydroxysteroid d 68.2 33 0.0011 27.9 9.4 102 110-213 17-153 (270)
461 2aef_A Calcium-gated potassium 67.9 43 0.0015 26.6 9.8 90 110-212 8-105 (234)
462 1wma_A Carbonyl reductase [NAD 67.7 13 0.00045 30.1 6.8 103 110-213 3-139 (276)
463 3hwr_A 2-dehydropantoate 2-red 67.5 39 0.0013 28.5 9.9 96 110-215 18-123 (318)
464 3r3s_A Oxidoreductase; structu 67.4 28 0.00096 28.9 8.9 102 110-213 48-186 (294)
465 3d1l_A Putative NADP oxidoredu 66.9 33 0.0011 27.9 9.1 89 111-211 10-101 (266)
466 3cea_A MYO-inositol 2-dehydrog 66.9 49 0.0017 28.0 10.5 95 110-214 7-104 (346)
467 3abi_A Putative uncharacterize 66.5 12 0.00039 32.6 6.4 66 110-182 15-84 (365)
468 2hmt_A YUAA protein; RCK, KTN, 66.4 9.7 0.00033 27.4 5.2 93 111-211 6-103 (144)
469 3qha_A Putative oxidoreductase 66.2 8.5 0.00029 32.3 5.3 85 112-212 16-105 (296)
470 2g5c_A Prephenate dehydrogenas 66.1 29 0.00099 28.5 8.7 90 112-211 2-95 (281)
471 3v2g_A 3-oxoacyl-[acyl-carrier 65.8 40 0.0014 27.6 9.4 101 110-212 30-165 (271)
472 3rc1_A Sugar 3-ketoreductase; 65.6 52 0.0018 28.1 10.5 95 111-217 27-125 (350)
473 3mog_A Probable 3-hydroxybutyr 65.6 25 0.00085 31.9 8.6 91 112-210 6-118 (483)
474 3nrc_A Enoyl-[acyl-carrier-pro 65.5 55 0.0019 26.8 10.4 73 110-186 25-114 (280)
475 3ond_A Adenosylhomocysteinase; 65.1 49 0.0017 30.1 10.3 88 110-212 264-352 (488)
476 3g79_A NDP-N-acetyl-D-galactos 65.1 68 0.0023 29.0 11.4 101 110-216 17-151 (478)
477 3ek2_A Enoyl-(acyl-carrier-pro 64.6 17 0.00057 29.6 6.8 99 110-212 13-153 (271)
478 4hkt_A Inositol 2-dehydrogenas 64.5 37 0.0013 28.7 9.2 94 112-217 4-99 (331)
479 3ppi_A 3-hydroxyacyl-COA dehyd 64.4 18 0.00061 29.8 7.0 70 110-182 29-110 (281)
480 4fn4_A Short chain dehydrogena 63.1 26 0.00088 28.8 7.6 73 110-184 6-93 (254)
481 1eg2_A Modification methylase 63.1 12 0.00041 32.0 5.7 87 159-254 39-140 (319)
482 1bg6_A N-(1-D-carboxylethyl)-L 62.8 23 0.00077 30.2 7.6 92 112-211 5-108 (359)
483 2zyd_A 6-phosphogluconate dehy 62.6 36 0.0012 30.8 9.1 121 111-251 15-137 (480)
484 3ezy_A Dehydrogenase; structur 62.3 41 0.0014 28.6 9.1 96 112-217 3-100 (344)
485 4gbj_A 6-phosphogluconate dehy 62.1 24 0.00081 29.7 7.4 114 112-255 6-125 (297)
486 1xg5_A ARPG836; short chain de 62.0 63 0.0021 26.3 10.0 73 110-185 31-121 (279)
487 3rd5_A Mypaa.01249.C; ssgcid, 61.8 28 0.00096 28.8 7.8 73 110-185 15-96 (291)
488 3k31_A Enoyl-(acyl-carrier-pro 61.7 24 0.00081 29.4 7.3 101 110-212 29-168 (296)
489 3mag_A VP39; methylated adenin 61.7 4.9 0.00017 33.9 2.8 33 110-142 60-96 (307)
490 1vpd_A Tartronate semialdehyde 61.4 18 0.00061 30.1 6.5 85 112-211 6-98 (299)
491 3slk_A Polyketide synthase ext 61.4 7.9 0.00027 37.7 4.7 90 109-213 344-443 (795)
492 3tri_A Pyrroline-5-carboxylate 61.3 16 0.00056 30.3 6.2 88 112-209 4-95 (280)
493 1gpj_A Glutamyl-tRNA reductase 61.2 11 0.00037 33.4 5.3 43 110-152 166-210 (404)
494 4gmf_A Yersiniabactin biosynth 60.8 29 0.001 30.3 7.9 93 110-213 6-102 (372)
495 3gt0_A Pyrroline-5-carboxylate 60.8 4.3 0.00015 33.1 2.4 86 112-209 3-94 (247)
496 2a4k_A 3-oxoacyl-[acyl carrier 60.6 37 0.0013 27.6 8.2 73 110-185 5-90 (263)
497 2q3e_A UDP-glucose 6-dehydroge 60.5 54 0.0018 29.4 9.9 41 112-152 6-48 (467)
498 3gvc_A Oxidoreductase, probabl 60.5 24 0.00081 29.1 7.1 74 110-186 28-114 (277)
499 1y1p_A ARII, aldehyde reductas 60.1 27 0.00092 29.2 7.5 75 110-185 10-93 (342)
500 3ado_A Lambda-crystallin; L-gu 60.0 13 0.00045 31.8 5.4 98 110-214 5-125 (319)
No 1
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.90 E-value=1.4e-22 Score=169.05 Aligned_cols=145 Identities=22% Similarity=0.223 Sum_probs=119.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. .+++++.+|+.+++++ ++||+|++..+++|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCC-CCeEEEEECcchhcCC
Confidence 6789999999999999999998 6899999999999999999876 6899999999998877 7899999999999999
Q ss_pred CHHH--HHHHHHhccCCCCEEEEEccCCCchhHhhhh-------------H-HHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 190 DPQR--GIREAYRVLKLGGKACIIGPVYPTFWLSRYF-------------A-DVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 190 ~~~~--~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
++.. +++++.++|||||.+++.++........... . .....+++.+++.++|+++||+++.+..
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 9876 9999999999999999998665432211100 0 1112456899999999999998777765
Q ss_pred cCccc
Q 022929 254 IGPKW 258 (290)
Q Consensus 254 ~~~~~ 258 (290)
.+..|
T Consensus 201 ~~~~w 205 (220)
T 3hnr_A 201 NHFVW 205 (220)
T ss_dssp SSSEE
T ss_pred cceEE
Confidence 54333
No 2
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.89 E-value=5.5e-22 Score=170.48 Aligned_cols=179 Identities=21% Similarity=0.234 Sum_probs=142.1
Q ss_pred HHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 76 FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
.++.+...|+......+........++..+....++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~ 90 (267)
T 3kkz_A 12 ELNLICDFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNAR 90 (267)
T ss_dssp HHHHHHHHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHH
Confidence 34455666666655555566666666776654457899999999999999999998 67799999999999999987732
Q ss_pred ----CCCceEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC----chhHhhhhHHH
Q 022929 156 ----LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP----TFWLSRYFADV 227 (290)
Q Consensus 156 ----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~----~~~~~~~~~~~ 227 (290)
.++++++.+|+.++++++++||+|++..+++|+ ++..+++++.++|||||.+++.++... .......+...
T Consensus 91 ~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 169 (267)
T 3kkz_A 91 QSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDA 169 (267)
T ss_dssp HTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHH
T ss_pred HcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHh
Confidence 246999999999988888899999999999999 889999999999999999999876422 12222233233
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 228 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
+..+++.+++.++|+++||+++++..++.
T Consensus 170 ~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 198 (267)
T 3kkz_A 170 YPEIDTIPNQVAKIHKAGYLPVATFILPE 198 (267)
T ss_dssp CTTCEEHHHHHHHHHHTTEEEEEEEECCG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEEECCH
Confidence 33456899999999999999999998874
No 3
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.89 E-value=5.2e-22 Score=169.37 Aligned_cols=176 Identities=19% Similarity=0.247 Sum_probs=138.5
Q ss_pred HhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----
Q 022929 80 LSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---- 155 (290)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---- 155 (290)
....|+......+........++..+....++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.++++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~ 94 (257)
T 3f4k_A 16 ICNYFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC 94 (257)
T ss_dssp HHHHHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC
Confidence 344555544444556666667777664445788999999999999999999975 499999999999999987732
Q ss_pred CCCceEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC----chhHhhhhHHHhhcC
Q 022929 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP----TFWLSRYFADVWMLF 231 (290)
Q Consensus 156 ~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~----~~~~~~~~~~~~~~~ 231 (290)
..+++++++|+.++++++++||+|++..+++|+ ++..+++++.++|+|||.+++.++... .......+......+
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (257)
T 3f4k_A 95 ADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEI 173 (257)
T ss_dssp TTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTC
T ss_pred CCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCC
Confidence 234899999999999888899999999999999 789999999999999999999875421 112222333333446
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEcCcc
Q 022929 232 PKEEEYIEWFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 232 ~~~~~~~~ll~~aGf~~v~~~~~~~~ 257 (290)
.+.+++.++|+++||+++++..++..
T Consensus 174 ~~~~~~~~~l~~aGf~~v~~~~~~~~ 199 (257)
T 3f4k_A 174 SVIPTCIDKMERAGYTPTAHFILPEN 199 (257)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEECCGG
T ss_pred CCHHHHHHHHHHCCCeEEEEEECChh
Confidence 78999999999999999999887753
No 4
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=5.2e-22 Score=169.94 Aligned_cols=163 Identities=19% Similarity=0.225 Sum_probs=134.2
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCC
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFP 172 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~ 172 (290)
.......+++.+... ++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.++++... .+++++.+|+.+++++
T Consensus 40 ~~~~~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 40 GLEATKKILSDIELN-ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHHTTTCCCC-TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCC
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCC
Confidence 345566777776553 78899999999999999999986 68999999999999999988654 5899999999998888
Q ss_pred CCCccEEEecCccccc--CCHHHHHHHHHhccCCCCEEEEEccCCCc-----hhHhhhhHHHhhcCCCHHHHHHHHHHCC
Q 022929 173 TDYADRYVSAGSIEYW--PDPQRGIREAYRVLKLGGKACIIGPVYPT-----FWLSRYFADVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~aG 245 (290)
+++||+|++..+++|+ +++..+++++.++|||||.+++.++.... .............+++.+++.++++++|
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 8899999999999999 77889999999999999999998765433 1112222222334679999999999999
Q ss_pred CcEEEEEEcCccc
Q 022929 246 FKDVQLKRIGPKW 258 (290)
Q Consensus 246 f~~v~~~~~~~~~ 258 (290)
|++++++.+..++
T Consensus 198 f~~~~~~~~~~~~ 210 (266)
T 3ujc_A 198 FKNVVSKDLSDYW 210 (266)
T ss_dssp CEEEEEEECHHHH
T ss_pred CeEEEEEeCCHHH
Confidence 9999999876544
No 5
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.88 E-value=7.8e-22 Score=166.04 Aligned_cols=156 Identities=22% Similarity=0.229 Sum_probs=123.4
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCCCCcc
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPTDYAD 177 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~~~~D 177 (290)
..++..+....++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.++++... .+++++.+|+.+++++ ++||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCce
Confidence 3444444433478999999999999999999998889999999999999999988653 3799999999998877 7799
Q ss_pred EEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchhH-hhhhHH-----------------------HhhcC
Q 022929 178 RYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFWL-SRYFAD-----------------------VWMLF 231 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~~~-----------------------~~~~~ 231 (290)
+|++..+++|++++. .+++++.++|||||.+++.+...+.... ...... .....
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKD 191 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccc
Confidence 999999999998766 5999999999999999998765443211 111000 11124
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 232 PKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 232 ~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
++.+++.++|+++||+.+++....
T Consensus 192 ~~~~~~~~ll~~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 192 IEMNQQLNWLKEAGFRDVSCIYKY 215 (234)
T ss_dssp CBHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cCHHHHHHHHHHcCCCceeeeeee
Confidence 678999999999999999886543
No 6
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.88 E-value=5.7e-22 Score=167.54 Aligned_cols=143 Identities=24% Similarity=0.316 Sum_probs=123.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+++++.+|+.++++++++||+|++..+++|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 6789999999999999999998 67999999999999999998766789999999999888888999999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHH-----hhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV-----WMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
++..+++++.++|+|||.+++.+...........+... ....++.+++.++++++||++++...+
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 99999999999999999999987655433222222222 123468999999999999999998865
No 7
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=3.4e-22 Score=171.29 Aligned_cols=142 Identities=20% Similarity=0.288 Sum_probs=112.1
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEec
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSA 182 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~ 182 (290)
+++.+|||+|||+|..+..+++.. ++.+|+|+|+|+.|++.|+++.. ..+++++++|+.+++++ +||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 488999999999999999999875 46799999999999999998732 34689999999998864 49999999
Q ss_pred CcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCch-hHhhhhH------------------------HHhhcCCCHH
Q 022929 183 GSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFA------------------------DVWMLFPKEE 235 (290)
Q Consensus 183 ~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~~~~~------------------------~~~~~~~~~~ 235 (290)
.+++|+++. ..++++++++|||||.+++.+...... .....+. ......++.+
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~ 226 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVE 226 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHH
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHH
Confidence 999999765 368999999999999999987654321 1111100 0011235789
Q ss_pred HHHHHHHHCCCcEEEEE
Q 022929 236 EYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 236 ~~~~ll~~aGf~~v~~~ 252 (290)
++.++|+++||+.+++.
T Consensus 227 ~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 227 THKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCeEEEE
Confidence 99999999999987763
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.88 E-value=5.7e-22 Score=167.84 Aligned_cols=141 Identities=17% Similarity=0.116 Sum_probs=118.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.++ .++++||+|++.++++|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD-GITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 6778999999999999999987 45899999999999999988765 899999999876 4567899999999999999
Q ss_pred CHHHHHHHHH-hccCCCCEEEEEccCCCchhHhhh----------------hHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 190 DPQRGIREAY-RVLKLGGKACIIGPVYPTFWLSRY----------------FADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 190 ~~~~~l~~~~-~~L~pgG~l~i~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
++..+++++. ++|||||.+++.++.......... ....+..+++.+++.++|+++||+++++.
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9999999999 999999999999876553321110 01112245799999999999999999987
Q ss_pred Ec
Q 022929 253 RI 254 (290)
Q Consensus 253 ~~ 254 (290)
.+
T Consensus 198 ~~ 199 (250)
T 2p7i_A 198 GI 199 (250)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 9
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.88 E-value=1.4e-21 Score=162.25 Aligned_cols=160 Identities=24% Similarity=0.365 Sum_probs=126.3
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL 169 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l 169 (290)
...+...+++..... ++ +|||||||+|.++..+++. ++.+++|+|+|+.+++.|+++.. ..+++++++|+.++
T Consensus 29 ~~~~~~~~~~~~~~~-~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 29 YPIIAENIINRFGIT-AG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHHHHCCC-EE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC
T ss_pred cHHHHHHHHHhcCCC-CC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC
Confidence 344555666655542 34 9999999999999999998 67899999999999999988732 24789999999998
Q ss_pred CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhH----------H---HhhcCCCHHH
Q 022929 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA----------D---VWMLFPKEEE 236 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~----------~---~~~~~~~~~~ 236 (290)
++++++||+|++..+++|++++..+++++.++|+|||.+++.+............. . .....++.++
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVER 185 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHH
T ss_pred CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHH
Confidence 88888999999999999999999999999999999999999876554321111100 0 1122347799
Q ss_pred HHHHHHHCCCcEEEEEEcCc
Q 022929 237 YIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 237 ~~~ll~~aGf~~v~~~~~~~ 256 (290)
+.++|+++||+++++.....
T Consensus 186 ~~~~l~~aGf~~v~~~~~~~ 205 (219)
T 3dlc_A 186 FQNVLDEIGISSYEIILGDE 205 (219)
T ss_dssp HHHHHHHHTCSSEEEEEETT
T ss_pred HHHHHHHcCCCeEEEEecCC
Confidence 99999999999998876543
No 10
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=1.1e-22 Score=167.59 Aligned_cols=141 Identities=16% Similarity=0.071 Sum_probs=118.6
Q ss_pred CCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC-
Q 022929 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP- 189 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~- 189 (290)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. +++++.+|+.++++++++||+|++..+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHP--SVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCT--TSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCC--CCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 689999999999999999998 6799999999999999998853 78999999998888888999999999999997
Q ss_pred -CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 190 -DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 190 -~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
+...+++++.++|+|||.+++..+.......... ......+++.+++.++|+++||+++++...+.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYH-PVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECC-SSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhc-hhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 7889999999999999999998765543110000 00012246899999999999999999998765
No 11
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.87 E-value=1.1e-21 Score=163.38 Aligned_cols=146 Identities=22% Similarity=0.198 Sum_probs=123.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.++++.. ..+++++.+|+.++++++++||+|++..++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCG
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhh
Confidence 77899999999999999999985 56899999999999999987742 247999999999988888899999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
+|++++..+++++.++|+|||.+++.+......... .....+++.+++.++++++||+++++..++..++
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 186 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKG----PPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCF 186 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS----CCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccC----CchhcccCHHHHHHHHHHCCCEEEEEEeeCCceE
Confidence 999999999999999999999999987654432111 1123356899999999999999999988765443
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.87 E-value=3.5e-21 Score=165.80 Aligned_cols=161 Identities=23% Similarity=0.234 Sum_probs=129.2
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPF 171 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~ 171 (290)
.+...+++.+... ++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.++++.. ..+++++.+|+.++++
T Consensus 48 ~~~~~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 48 RLTDEMIALLDVR-SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS
T ss_pred HHHHHHHHhcCCC-CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC
Confidence 3445555555543 78999999999999999999876 6899999999999999987632 2468999999999998
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCc---hhHhhhhHH----H-hhcCCCHHHHHHHHHH
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---FWLSRYFAD----V-WMLFPKEEEYIEWFQK 243 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~----~-~~~~~~~~~~~~ll~~ 243 (290)
++++||+|++..+++|++++..+++++.++|||||.+++.+..... ......... . ...+++.+++.+++++
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 205 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQ 205 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHH
Confidence 8889999999999999999999999999999999999998754321 111111111 1 2345789999999999
Q ss_pred CCCcEEEEEEcCccc
Q 022929 244 AGFKDVQLKRIGPKW 258 (290)
Q Consensus 244 aGf~~v~~~~~~~~~ 258 (290)
+||++++++.++.++
T Consensus 206 aGf~~~~~~~~~~~~ 220 (273)
T 3bus_A 206 AELVVTSTVDISAQA 220 (273)
T ss_dssp TTCEEEEEEECHHHH
T ss_pred cCCeEEEEEECcHhH
Confidence 999999999886543
No 13
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.87 E-value=1.5e-21 Score=164.89 Aligned_cols=144 Identities=22% Similarity=0.230 Sum_probs=118.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCC-eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
++.+|||||||+|.++..+++. +. +++|+|+|+.+++.++++....+++++.+|+.++++++++||+|++..+++|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 6789999999999999999987 44 99999999999999999877668999999998888877889999999999999
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccCCCc-------h----------hHh----------hhhH-HHhhcCCCHHHHHHH
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPVYPT-------F----------WLS----------RYFA-DVWMLFPKEEEYIEW 240 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-------~----------~~~----------~~~~-~~~~~~~~~~~~~~l 240 (290)
+++..+++++.++|+|||.+++..+.... + ... .... .....+++.+++.++
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 200 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNA 200 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHH
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHH
Confidence 99999999999999999999997643110 0 000 0000 011123589999999
Q ss_pred HHHCCCcEEEEEEcC
Q 022929 241 FQKAGFKDVQLKRIG 255 (290)
Q Consensus 241 l~~aGf~~v~~~~~~ 255 (290)
|+++||+++++....
T Consensus 201 l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 201 LIRSGFAIEHVEEFC 215 (243)
T ss_dssp HHHTTCEEEEEEECC
T ss_pred HHHcCCEeeeeccCC
Confidence 999999999998764
No 14
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=1.5e-21 Score=167.36 Aligned_cols=169 Identities=18% Similarity=0.314 Sum_probs=127.2
Q ss_pred HHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 76 FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
+|+..+..|+..... ...+...+++.+.. .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.
T Consensus 4 ~y~~~a~~y~~~~~~---~~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~- 76 (261)
T 3ege_A 4 IYNSIGKQYSQTRVP---DIRIVNAIINLLNL-PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVHP- 76 (261)
T ss_dssp ---------CCSBCC---CHHHHHHHHHHHCC-CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCCT-
T ss_pred HHHHHHHHHhhcccc---cHHHHHHHHHHhCC-CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcc-
Confidence 566667777765433 23455566665554 37899999999999999999984 789999999999999888665
Q ss_pred CCCceEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCc---hhHhhh----hHHHh
Q 022929 156 LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPT---FWLSRY----FADVW 228 (290)
Q Consensus 156 ~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~----~~~~~ 228 (290)
+++++.+|+.++++++++||+|++..+++|++++..+++++.++|| ||.+++.+..... .+.... .....
T Consensus 77 --~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
T 3ege_A 77 --QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL 153 (261)
T ss_dssp --TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHH
T ss_pred --CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhh
Confidence 8999999999999888899999999999999999999999999999 9988887664321 111111 22223
Q ss_pred hcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 229 MLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 229 ~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
..+++.+++. +|+++||+.+++..+.
T Consensus 154 ~~~~~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 154 RFLPLDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp TSCCHHHHHH-HHHHHHCSEEEEEECC
T ss_pred hhCCCHHHHH-HHHHcCCCceeEEEec
Confidence 4566788899 9999999999988874
No 15
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.87 E-value=2.1e-21 Score=161.35 Aligned_cols=179 Identities=21% Similarity=0.170 Sum_probs=129.3
Q ss_pred HHHHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh
Q 022929 74 FWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK 153 (290)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~ 153 (290)
..+|+..+..|+..+.+.. ......+++.+....++.+|||||||+|.++..+++. +.+++|+|+|+.+++.+++.
T Consensus 12 ~~~~~~~a~~y~~~~~~~~--~~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~ 87 (218)
T 3ou2_A 12 LSYYRARASEYDATFVPYM--DSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH 87 (218)
T ss_dssp HHHHHHHGGGHHHHHHHHH--TTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhhhhHH--HHHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc
Confidence 3566666666655332211 1112233333332336789999999999999999998 67999999999999999983
Q ss_pred CCCCCceEEEcCCCCCCCCCCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHH-----
Q 022929 154 EPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD----- 226 (290)
Q Consensus 154 ~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~----- 226 (290)
. ..+++++.+|+.++ +++++||+|++..+++|++++ ..+++++.++|+|||.+++.+...+..........
T Consensus 88 ~-~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 165 (218)
T 3ou2_A 88 G-LDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVA 165 (218)
T ss_dssp C-CTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CE
T ss_pred C-CCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccc
Confidence 3 36799999999887 677889999999999999986 78999999999999999999876543222221110
Q ss_pred ------------HhhcCCCHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 227 ------------VWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 227 ------------~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
....+++.+++.++|+++||++...+..+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~~ 209 (218)
T 3ou2_A 166 VRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEVHPGFL 209 (218)
T ss_dssp EEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEEETTEE
T ss_pred eeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeeccccce
Confidence 01235689999999999999966665544433
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.87 E-value=1.2e-21 Score=166.95 Aligned_cols=162 Identities=17% Similarity=0.125 Sum_probs=128.8
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCC
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDA 166 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~ 166 (290)
.+........++..+.. .++.+|||||||+|.++..+++.. +.+++|+|+|+.+++.|+++.. ..+++++.+|+
T Consensus 18 ~~~~~~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLRM-KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp SSCCHHHHHHHHHHTCC-CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC
T ss_pred CCCCHHHHHHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh
Confidence 34556666677766654 378999999999999999999986 6799999999999999987642 24799999999
Q ss_pred CCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhH-----HHhhcCCCHHHHHHHH
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA-----DVWMLFPKEEEYIEWF 241 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ll 241 (290)
.++++ +++||+|++..+++|++++..+++++.++|||||.+++.++..........+. .....+++.+++.++|
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAF 174 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHH
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHH
Confidence 98887 67899999999999999999999999999999999999875432211111111 1122467899999999
Q ss_pred HHCCCcEEEEEEcC
Q 022929 242 QKAGFKDVQLKRIG 255 (290)
Q Consensus 242 ~~aGf~~v~~~~~~ 255 (290)
+++||+++++...+
T Consensus 175 ~~aGf~~~~~~~~~ 188 (256)
T 1nkv_A 175 DDLGYDVVEMVLAD 188 (256)
T ss_dssp HTTTBCCCEEEECC
T ss_pred HHCCCeeEEEEeCC
Confidence 99999998876644
No 17
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.87 E-value=2.2e-21 Score=160.80 Aligned_cols=171 Identities=18% Similarity=0.181 Sum_probs=133.3
Q ss_pred HHHHHHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHh
Q 022929 72 EAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151 (290)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 151 (290)
....+|+..+..|...... ......++..+. ++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++
T Consensus 12 ~~~~~~~~~~~~y~~~~~~----~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 82 (211)
T 3e23_A 12 DTLRFYRGNATAYAERQPR----SATLTKFLGELP---AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEAS 82 (211)
T ss_dssp HHHHHHHHSHHHHTTCCCC----CHHHHHHHTTSC---TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccch----hHHHHHHHHhcC---CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHH
Confidence 3456777777778776554 223334444432 6789999999999999999988 679999999999999999
Q ss_pred hhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC--CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhh
Q 022929 152 QKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP--DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWM 229 (290)
Q Consensus 152 ~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~ 229 (290)
++. ++.+..+|+..++ .+++||+|++..+++|++ +...+++++.++|||||.+++..+........ .. ....
T Consensus 83 ~~~---~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~-~~~~ 156 (211)
T 3e23_A 83 RRL---GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD-KL-ARYY 156 (211)
T ss_dssp HHH---TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC-TT-SCEE
T ss_pred Hhc---CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc-cc-chhc
Confidence 876 5778899998888 677899999999999998 66789999999999999999986544321110 01 1122
Q ss_pred cCCCHHHHHHHHHHCC-CcEEEEEEcCcc
Q 022929 230 LFPKEEEYIEWFQKAG-FKDVQLKRIGPK 257 (290)
Q Consensus 230 ~~~~~~~~~~ll~~aG-f~~v~~~~~~~~ 257 (290)
.+++.+++.++|+++| |+++++......
T Consensus 157 ~~~~~~~~~~~l~~aG~f~~~~~~~~~~~ 185 (211)
T 3e23_A 157 NYPSEEWLRARYAEAGTWASVAVESSEGK 185 (211)
T ss_dssp CCCCHHHHHHHHHHHCCCSEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 4569999999999999 999999876543
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.86 E-value=6e-21 Score=163.28 Aligned_cols=143 Identities=25% Similarity=0.357 Sum_probs=117.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
++.+|||||||+|.++..+++.. .+++|+|+|+.+++.|+++. ...+++++.+|+.++++++++||+|++..+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 78899999999999999999984 59999999999999998763 23478999999999998888999999999999
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEccCCCchhH-hhhhHH-------HhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWL-SRYFAD-------VWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
|++++..+++++.++|||||.+++.+...+.... ...... ....+++.+++.++|+++||+++++...
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 9999999999999999999999998654432211 111111 1124568999999999999998887665
No 19
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.86 E-value=4e-21 Score=163.66 Aligned_cols=166 Identities=22% Similarity=0.236 Sum_probs=127.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....+++++.+|+.++++++++||+|++..+++|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 78999999999999999999883 23999999999999999998876789999999999888888999999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCch------------------hHhhhhH-----------HHhhcCCCHHHHHHH
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTF------------------WLSRYFA-----------DVWMLFPKEEEYIEW 240 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~------------------~~~~~~~-----------~~~~~~~~~~~~~~l 240 (290)
++..+++++.++|+|||.+++..+..... ....++. ......++.+++.++
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 202 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQT 202 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHH
Confidence 99999999999999999999974321100 0000000 001112489999999
Q ss_pred HHHCCCcEEEEEEcCcc-------cccccccccceeeeEEEEecC
Q 022929 241 FQKAGFKDVQLKRIGPK-------WYRGVRRHGLIMGCSVTGVKP 278 (290)
Q Consensus 241 l~~aGf~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~a~k~ 278 (290)
|+++||+++++.+..+. .+....+.|.++ .+.++|.
T Consensus 203 l~~aGF~~~~~~e~~~~~~~~~~~~~~~~~~~P~fl--~~~~~~~ 245 (253)
T 3g5l_A 203 LLKNGFQINSVIEPEPAPELKDLPEMQDEYRRPMML--LISATKQ 245 (253)
T ss_dssp HHHTTEEEEEEECCCCCGGGSSCGGGGGGGTSCCEE--EEEEEEC
T ss_pred HHHcCCeeeeeecCCCchhhccChhHHHhhcCceEE--EEEEecc
Confidence 99999999999876432 112333445555 4666554
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.86 E-value=5e-21 Score=166.91 Aligned_cols=158 Identities=16% Similarity=0.152 Sum_probs=126.1
Q ss_pred HHHhhcccc---CCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC
Q 022929 97 MRDDALEPA---DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL 169 (290)
Q Consensus 97 ~~~~~l~~~---~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l 169 (290)
....++..+ ....++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++.. ..+++++.+|+.++
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 344555555 122478999999999999999999876 5699999999999999987632 25799999999999
Q ss_pred CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchh----HhhhhHHH-hhcCCCHHHHHHHHHHC
Q 022929 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW----LSRYFADV-WMLFPKEEEYIEWFQKA 244 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~ll~~a 244 (290)
|+++++||+|++..+++|++++..+++++.++|||||.+++.++...... ....+... ...+.+.+++.++|+++
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 224 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKEC 224 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHT
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHC
Confidence 98888999999999999999999999999999999999999876533211 11111111 12356899999999999
Q ss_pred CCcEEEEEEcC
Q 022929 245 GFKDVQLKRIG 255 (290)
Q Consensus 245 Gf~~v~~~~~~ 255 (290)
||+++++..+.
T Consensus 225 Gf~~~~~~~~~ 235 (297)
T 2o57_A 225 GLVTLRTFSRP 235 (297)
T ss_dssp TEEEEEEEECH
T ss_pred CCeEEEEEECc
Confidence 99999998865
No 21
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.86 E-value=6.4e-21 Score=164.44 Aligned_cols=147 Identities=20% Similarity=0.264 Sum_probs=120.5
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
.++.+|||||||+|.++..+++..|+.+++++|+|+.+++.++++. ...+++++..|+.++++++++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 4789999999999999999999988899999999999999998773 2347999999999988888899999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCc-------hhHhhhhH-------HHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPT-------FWLSRYFA-------DVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-------~~~~~~~~-------~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+|++++..+++++.++|+|||.+++.++.... ......+. .......+..++.++|+++||+++++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~ 195 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRV 195 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEE
Confidence 99999999999999999999999998754321 11111111 11112346689999999999999998
Q ss_pred EEcC
Q 022929 252 KRIG 255 (290)
Q Consensus 252 ~~~~ 255 (290)
+...
T Consensus 196 ~~~~ 199 (276)
T 3mgg_A 196 EPRM 199 (276)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 8653
No 22
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.85 E-value=2.1e-21 Score=166.46 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=110.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecC-ccccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAG-SIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~-~l~~~ 188 (290)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. +++++.+|+.++++ +++||+|++.. +++|+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP--DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT--TSEEEECCTTTCCC-SCCEEEEEECTTGGGGS
T ss_pred CCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC--CCEEEECChHHCCc-cCCcCEEEEcCchhhhc
Confidence 5689999999999999999988 5799999999999999998865 78999999999887 56799999998 99999
Q ss_pred CC---HHHHHHHHHhccCCCCEEEEEccCCCchhHhh-------------------------------------------
Q 022929 189 PD---PQRGIREAYRVLKLGGKACIIGPVYPTFWLSR------------------------------------------- 222 (290)
Q Consensus 189 ~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~------------------------------------------- 222 (290)
++ ...+++++.++|+|||.+++.....+......
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGIT 204 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEE
Confidence 64 45789999999999999999643222110000
Q ss_pred -hhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 223 -YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 223 -~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
........+++.+++.++|+++||+++++.
T Consensus 205 ~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 235 (263)
T 3pfg_A 205 HHEESHRITLFTREQYERAFTAAGLSVEFMP 235 (263)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred EEEEEEEEEeecHHHHHHHHHHCCCEEEEee
Confidence 000001235789999999999999988773
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.85 E-value=8.3e-21 Score=160.54 Aligned_cols=155 Identities=15% Similarity=0.136 Sum_probs=123.9
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC--CCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL--PFP 172 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l--~~~ 172 (290)
+.+...+...+....++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++ ++++..|+.+. +++
T Consensus 26 ~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-----~~~~~~d~~~~~~~~~ 98 (240)
T 3dli_A 26 ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-----FNVVKSDAIEYLKSLP 98 (240)
T ss_dssp HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-----SEEECSCHHHHHHTSC
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-----cceeeccHHHHhhhcC
Confidence 3444455555554457899999999999999999988 67899999999999999975 78888888664 677
Q ss_pred CCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhh-h-hHHHhhcCCCHHHHHHHHHHCCCcE
Q 022929 173 TDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSR-Y-FADVWMLFPKEEEYIEWFQKAGFKD 248 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ll~~aGf~~ 248 (290)
+++||+|++..+++|++++ ..+++++.++|||||.+++..+......... . .......+++.+++.++++++||++
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 8889999999999999955 8999999999999999999887755432211 1 1112234578999999999999999
Q ss_pred EEEEEcCc
Q 022929 249 VQLKRIGP 256 (290)
Q Consensus 249 v~~~~~~~ 256 (290)
+++....+
T Consensus 179 ~~~~~~~~ 186 (240)
T 3dli_A 179 VKIEFFEE 186 (240)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 99888763
No 24
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.85 E-value=1.9e-20 Score=169.26 Aligned_cols=145 Identities=22% Similarity=0.237 Sum_probs=118.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC-----------CCCCceEEEcCCCCC------CC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-----------PLKECKIVEGDAEDL------PF 171 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----------~~~~v~~~~~d~~~l------~~ 171 (290)
++.+|||||||+|.++..+++.. ++.+|+|+|+|+.+++.|+++. ...+++++.+|+.++ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 78899999999999999999886 5789999999999999999873 236899999999887 88
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh------hhHHHhhcCCCHHHHHHHHHHCC
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR------YFADVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~aG 245 (290)
++++||+|++..++++++++..+++++.++|||||.+++.+.......... .+.......++.++|.++|+++|
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 888999999999999999999999999999999999999865433211000 11111223468899999999999
Q ss_pred CcEEEEEEc
Q 022929 246 FKDVQLKRI 254 (290)
Q Consensus 246 f~~v~~~~~ 254 (290)
|+++++...
T Consensus 243 F~~v~~~~~ 251 (383)
T 4fsd_A 243 FRDVRLVSV 251 (383)
T ss_dssp CCCEEEEEE
T ss_pred CceEEEEec
Confidence 998877654
No 25
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.85 E-value=2.8e-21 Score=163.53 Aligned_cols=156 Identities=15% Similarity=0.064 Sum_probs=120.7
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC---CceEEEcCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK---ECKIVEGDAEDLPFP 172 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~v~~~~~d~~~l~~~ 172 (290)
.+...++.......++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|+++.... +++++..|+.+++++
T Consensus 65 ~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 143 (241)
T 2ex4_A 65 KFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE 143 (241)
T ss_dssp HHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC
T ss_pred HHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCC
Confidence 3344444444333368899999999999999988875 569999999999999999886543 588999999888877
Q ss_pred CCCccEEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchhHhhhhHH-HhhcCCCHHHHHHHHHHCCCcEE
Q 022929 173 TDYADRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD-VWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
+++||+|++..+++|++++. .+++++.++|+|||.+++.++..... ..+.. .....++.+++.++|+++||+++
T Consensus 144 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 144 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG---VILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS---EEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc---ceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 77899999999999998855 89999999999999999987654320 00100 01123478999999999999999
Q ss_pred EEEEcC
Q 022929 250 QLKRIG 255 (290)
Q Consensus 250 ~~~~~~ 255 (290)
+++...
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 988764
No 26
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.85 E-value=2.4e-20 Score=157.68 Aligned_cols=152 Identities=20% Similarity=0.305 Sum_probs=122.6
Q ss_pred hccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCcc
Q 022929 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYAD 177 (290)
Q Consensus 101 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D 177 (290)
.++.+... ++.+|||||||+|.++..+++. +.+++++|+|+.+++.++++.. ..+++++.+|+.++++++++||
T Consensus 13 ~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 13 MIKTAECR-AEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHHTCC-TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred HHHHhCcC-CCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEE
Confidence 34444443 7899999999999999999988 4599999999999999987642 2478999999999998888999
Q ss_pred EEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHh-hhhH-------HHhhcCCCHHHHHHHHHHCCCcEE
Q 022929 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS-RYFA-------DVWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
+|++..+++|++++..+++++.++|+|||.+++.+...+..... .... ......++.++|.++|+++||+++
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~ 169 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQ 169 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEE
T ss_pred EEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEE
Confidence 99999999999999999999999999999999987654332211 1111 111245689999999999999988
Q ss_pred EEEEcC
Q 022929 250 QLKRIG 255 (290)
Q Consensus 250 ~~~~~~ 255 (290)
++....
T Consensus 170 ~~~~~~ 175 (239)
T 1xxl_A 170 DIQKWN 175 (239)
T ss_dssp EEEEEE
T ss_pred EEEeec
Confidence 887753
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.85 E-value=3.1e-20 Score=162.43 Aligned_cols=157 Identities=23% Similarity=0.249 Sum_probs=124.9
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCC
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~ 174 (290)
..++..+.. .++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|+++.. ..+++++.+|+.++ ++
T Consensus 62 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 136 (302)
T 3hem_A 62 KLALDKLNL-EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DE 136 (302)
T ss_dssp HHHHHTTCC-CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CC
T ss_pred HHHHHHcCC-CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CC
Confidence 345555544 3788999999999999999999875 799999999999999987742 23689999999876 56
Q ss_pred CccEEEecCcccccCCH---------HHHHHHHHhccCCCCEEEEEccCCCchhHhh---------------hhHH---H
Q 022929 175 YADRYVSAGSIEYWPDP---------QRGIREAYRVLKLGGKACIIGPVYPTFWLSR---------------YFAD---V 227 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~~~---------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---------------~~~~---~ 227 (290)
+||+|++..+++|++++ ..+++++.++|||||.+++.+.......... ++.. .
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP 216 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC
Confidence 79999999999999765 6899999999999999999877655332111 1111 0
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEcCccccc
Q 022929 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYR 260 (290)
Q Consensus 228 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~~ 260 (290)
...+++.+++.++++++||++++++.++.++..
T Consensus 217 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~ 249 (302)
T 3hem_A 217 GGRLPRISQVDYYSSNAGWKVERYHRIGANYVP 249 (302)
T ss_dssp TCCCCCHHHHHHHHHHHTCEEEEEEECGGGHHH
T ss_pred CCCCCCHHHHHHHHHhCCcEEEEEEeCchhHHH
Confidence 113568999999999999999999998877543
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.85 E-value=2e-20 Score=157.09 Aligned_cols=147 Identities=20% Similarity=0.226 Sum_probs=120.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--------CceEEEcCCCCCCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--------ECKIVEGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~v~~~~~d~~~l~~~~~~~D~i~~ 181 (290)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.... ++++...|+..+++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 7789999999999999999998 679999999999999999876543 368999999998888889999999
Q ss_pred cCcccccCCHH---HHHHHHHhccCCCCEEEEEccCCCchh--Hhhhh-HH---------------------HhhcCCCH
Q 022929 182 AGSIEYWPDPQ---RGIREAYRVLKLGGKACIIGPVYPTFW--LSRYF-AD---------------------VWMLFPKE 234 (290)
Q Consensus 182 ~~~l~~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~-~~---------------------~~~~~~~~ 234 (290)
..+++|++++. .+++++.++|+|||.+++.++...... ..... .. ....+++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 99999999987 899999999999999999876543211 11110 00 01235789
Q ss_pred HHHHHHHHHCCCcEEEEEEcCccc
Q 022929 235 EEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 235 ~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
+++.++|+++||+++++.......
T Consensus 188 ~~l~~ll~~aGf~~~~~~~~~~~~ 211 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDYFRVKELET 211 (235)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEecceee
Confidence 999999999999999998765433
No 29
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=3.9e-20 Score=157.84 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=120.0
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCc
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYA 176 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~ 176 (290)
....++..+... ++.+|||||||+|.++..+++..|+.+++++|+|+.+++.++++. .+++++.+|+.+++ ++++|
T Consensus 21 ~~~~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~--~~~~~~~~d~~~~~-~~~~f 96 (259)
T 2p35_A 21 PARDLLAQVPLE-RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL--PNTNFGKADLATWK-PAQKA 96 (259)
T ss_dssp HHHHHHTTCCCS-CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS--TTSEEEECCTTTCC-CSSCE
T ss_pred HHHHHHHhcCCC-CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC--CCcEEEECChhhcC-ccCCc
Confidence 344555555443 678999999999999999999988889999999999999999883 57899999999888 67789
Q ss_pred cEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh----hh---------H---HHhhcCCCHHHHHHH
Q 022929 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR----YF---------A---DVWMLFPKEEEYIEW 240 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~----~~---------~---~~~~~~~~~~~~~~l 240 (290)
|+|++..+++|++++..+++++.++|+|||.+++..+......... .. . .....+++.+++.++
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNA 176 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHH
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999999876442211111 00 0 012245789999999
Q ss_pred HHHCCCcEEE
Q 022929 241 FQKAGFKDVQ 250 (290)
Q Consensus 241 l~~aGf~~v~ 250 (290)
|+++||++..
T Consensus 177 l~~aGf~v~~ 186 (259)
T 2p35_A 177 LSPKSSRVDV 186 (259)
T ss_dssp HGGGEEEEEE
T ss_pred HHhcCCceEE
Confidence 9999997543
No 30
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.85 E-value=5.1e-21 Score=153.17 Aligned_cols=137 Identities=22% Similarity=0.290 Sum_probs=115.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++ ..++++...| .++++++||+|++..+++|++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~--~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK--FDSVITLSDP---KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH--CTTSEEESSG---GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh--CCCcEEEeCC---CCCCCCceEEEEEccchhccc
Confidence 67899999999999999999985 4999999999999999988 4589999998 567778899999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
++..+++++.++|+|||.+++.+......... ......++.+++.++++ ||+++++..+++..+
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~ 153 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIG----PPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHF 153 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS----SCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEE
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccC----chHhhhcCHHHHHHHHh--CcEEEEccCCCCceE
Confidence 99999999999999999999987654432111 11233468999999999 999999988775443
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.84 E-value=1.1e-20 Score=166.18 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=125.2
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~ 175 (290)
.+++.+....++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++.. ..+++++.+|+.++++++++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 345555523478999999999999999999885 6799999999999999987632 24699999999999888889
Q ss_pred ccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchh-----HhhhhH-HHhhcCCCHHHHHHHHHHCCCcEE
Q 022929 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-----LSRYFA-DVWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
||+|++..+++|+ ++..+++++.++|||||.+++.++...... ....+. .....+++.+++.++|+++||+++
T Consensus 186 fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~ 264 (312)
T 3vc1_A 186 VTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPH 264 (312)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEE
T ss_pred EeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEE
Confidence 9999999999999 589999999999999999999875433211 111111 222245789999999999999999
Q ss_pred EEEEcCc
Q 022929 250 QLKRIGP 256 (290)
Q Consensus 250 ~~~~~~~ 256 (290)
+++.++.
T Consensus 265 ~~~~~~~ 271 (312)
T 3vc1_A 265 TIVDLTP 271 (312)
T ss_dssp EEEECHH
T ss_pred EEEeCCH
Confidence 9999875
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.84 E-value=1.2e-20 Score=163.71 Aligned_cols=144 Identities=18% Similarity=0.289 Sum_probs=118.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCC-CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLP-FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~-~~~~~~D~i~~~~~ 184 (290)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .+++++.+|+.+++ +.+++||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4689999999999999999998 78999999999999999987432 46889999998877 67788999999999
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhh----H-------------HHhhcCCCHHHHHHHHHHCCCc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF----A-------------DVWMLFPKEEEYIEWFQKAGFK 247 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~----~-------------~~~~~~~~~~~~~~ll~~aGf~ 247 (290)
++|++++..+++++.++|||||.+++.++........... . ..+..+++.+++.++|+++||+
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 9999999999999999999999999987654322111110 0 0011346889999999999999
Q ss_pred EEEEEEcC
Q 022929 248 DVQLKRIG 255 (290)
Q Consensus 248 ~v~~~~~~ 255 (290)
++++..+.
T Consensus 226 v~~~~~~~ 233 (285)
T 4htf_A 226 IMGKTGVR 233 (285)
T ss_dssp EEEEEEES
T ss_pred eeeeeeEE
Confidence 99988864
No 33
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.84 E-value=6.5e-20 Score=152.93 Aligned_cols=135 Identities=25% Similarity=0.357 Sum_probs=112.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++. +++|+|+.+++.++++ +++++.+|+.++++++++||+|++..+++|++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 3789999999999999887654 9999999999999976 68899999988888888899999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHH-------HhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD-------VWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
++..+++++.++|+|||.+++.++............. ....+++.+++.++|+++||+++++...
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 9999999999999999999998776543321111100 1123468999999999999999988775
No 34
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.84 E-value=7.8e-21 Score=160.64 Aligned_cols=175 Identities=19% Similarity=0.127 Sum_probs=125.2
Q ss_pred HhHHhHhhhcccCCCcccHHHHHhhccccCC-CCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 77 YRFLSIVYDHVINPGHWTEDMRDDALEPADL-SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
|+.++..|+...........+...+.+.+.. ..++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++..
T Consensus 3 y~~~a~~yd~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 3 YNKFAHIYDKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHHHHHTTCSCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHh
Confidence 5566666665544122223333333333221 126789999999999999999988 6799999999999999987743
Q ss_pred C--CCceEEEcCCCCCCCCCCCccEEEecC-ccccc---CCHHHHHHHHHhccCCCCEEEEEccCCCchhHh--------
Q 022929 156 L--KECKIVEGDAEDLPFPTDYADRYVSAG-SIEYW---PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS-------- 221 (290)
Q Consensus 156 ~--~~v~~~~~d~~~l~~~~~~~D~i~~~~-~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-------- 221 (290)
. .+++++.+|+.+++++ ++||+|++.. +++|+ .+...+++++.++|+|||.+++..+........
T Consensus 81 ~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 159 (246)
T 1y8c_A 81 SQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNY 159 (246)
T ss_dssp HTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEE
T ss_pred hcCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEe
Confidence 2 2689999999888776 6799999998 99999 455689999999999999999854432110000
Q ss_pred ------hhh---------------------------HHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 222 ------RYF---------------------------ADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 222 ------~~~---------------------------~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
..+ ......+++.+++.++|+++||+++++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 160 DDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cCCcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 000 001124579999999999999999988654
No 35
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=163.85 Aligned_cols=147 Identities=19% Similarity=0.232 Sum_probs=113.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---------------------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------------------------------- 156 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------------------------------- 156 (290)
++.+|||||||+|.++..+++.+++.+|+|+|+|+.+++.|+++...
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 67899999999999999999998889999999999999999987432
Q ss_pred ----------------------------CCceEEEcCCCCCC-----CCCCCccEEEecCcccccC------CHHHHHHH
Q 022929 157 ----------------------------KECKIVEGDAEDLP-----FPTDYADRYVSAGSIEYWP------DPQRGIRE 197 (290)
Q Consensus 157 ----------------------------~~v~~~~~d~~~l~-----~~~~~~D~i~~~~~l~~~~------~~~~~l~~ 197 (290)
.+++|.++|+...+ +..++||+|+|..+++|+. +..+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 47999999997644 4567899999999997764 56789999
Q ss_pred HHhccCCCCEEEEEccCCCchhHh-----hhhHHHhhcCCCHHHHHHHHHH--CCCcEEEEEEcCc
Q 022929 198 AYRVLKLGGKACIIGPVYPTFWLS-----RYFADVWMLFPKEEEYIEWFQK--AGFKDVQLKRIGP 256 (290)
Q Consensus 198 ~~~~L~pgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ll~~--aGf~~v~~~~~~~ 256 (290)
+.++|+|||.|++....+..+... ..........+.++++.++|.+ +||+.+++.....
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~~ 271 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPH 271 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC----
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccCC
Confidence 999999999999976543322111 1122222334568899999999 9999888776543
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.84 E-value=9.5e-20 Score=158.02 Aligned_cols=158 Identities=22% Similarity=0.192 Sum_probs=123.4
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFP 172 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~ 172 (290)
....+++.+... ++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.++++.. ..++++..+|+.+++
T Consensus 52 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 52 KIDLALGKLGLQ-PGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHHTTTTCC-TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--
T ss_pred HHHHHHHHcCCC-CcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--
Confidence 344555555543 78899999999999999999665 5699999999999999988743 247899999998765
Q ss_pred CCCccEEEecCccccc--CCHHHHHHHHHhccCCCCEEEEEccCCCchhH---------------hhhhHHH---hhcCC
Q 022929 173 TDYADRYVSAGSIEYW--PDPQRGIREAYRVLKLGGKACIIGPVYPTFWL---------------SRYFADV---WMLFP 232 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---------------~~~~~~~---~~~~~ 232 (290)
++||+|++..+++|+ +++..+++++.++|||||.+++.++....... ...+... ...++
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLP 206 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCC
Confidence 679999999999999 67789999999999999999998765443211 0001000 12346
Q ss_pred CHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 233 KEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 233 ~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
+.+++.++++++||++++++.++.++.
T Consensus 207 s~~~~~~~l~~aGf~~~~~~~~~~~y~ 233 (287)
T 1kpg_A 207 SIPMVQECASANGFTVTRVQSLQPHYA 233 (287)
T ss_dssp CHHHHHHHHHTTTCEEEEEEECHHHHH
T ss_pred CHHHHHHHHHhCCcEEEEEEeCcHhHH
Confidence 899999999999999999998876544
No 37
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.84 E-value=1.6e-20 Score=156.69 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=110.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC---CCC-CCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL---PFP-TDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l---~~~-~~~~D~i~~~~~l 185 (290)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++ .++.+...|+.++ ++. +.+||+|++..++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA---GAGEVHLASYAQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT---CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh---cccccchhhHHhhcccccccCCCccEEEECchh
Confidence 5699999999999999999988 67999999999999999987 4677888887654 433 3459999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhh--------h-------HHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRY--------F-------ADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
+ ..++..+++++.++|+|||.+++.++.......... + ......+++.++|.++|+++||++++
T Consensus 127 ~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 127 L-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp C-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred h-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 9 888999999999999999999998765432211100 0 01112346899999999999999998
Q ss_pred EEE
Q 022929 251 LKR 253 (290)
Q Consensus 251 ~~~ 253 (290)
+..
T Consensus 206 ~~~ 208 (227)
T 3e8s_A 206 LQE 208 (227)
T ss_dssp EEC
T ss_pred Eec
Confidence 876
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.83 E-value=2e-20 Score=163.95 Aligned_cols=146 Identities=21% Similarity=0.195 Sum_probs=117.2
Q ss_pred CCCCEEEEEcCccchhHHHHH-hhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCCCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIV-KHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPFPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~-~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~~~~~~D~i~~~~ 183 (290)
.++.+|||||||+|.++..++ ...++.+|+|+|+|+.+++.|+++... .+++++++|+.+++++ ++||+|++..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 378999999999999999986 456788999999999999999988543 3489999999998877 7899999999
Q ss_pred cccccCCHHH---HHHHHHhccCCCCEEEEEccCCCchhHh-------h-----------hhHH----HhhcCCCHHHHH
Q 022929 184 SIEYWPDPQR---GIREAYRVLKLGGKACIIGPVYPTFWLS-------R-----------YFAD----VWMLFPKEEEYI 238 (290)
Q Consensus 184 ~l~~~~~~~~---~l~~~~~~L~pgG~l~i~~~~~~~~~~~-------~-----------~~~~----~~~~~~~~~~~~ 238 (290)
+++|++++.. +++++.++|||||.+++.+...+..... . .+.. .+..+++.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 9999998875 7999999999999999987543211000 0 0011 112347899999
Q ss_pred HHHHHCCCcEEEEEEcC
Q 022929 239 EWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 239 ~ll~~aGf~~v~~~~~~ 255 (290)
++|+++||+++++....
T Consensus 276 ~~l~~aGF~~v~~~~~~ 292 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDR 292 (305)
T ss_dssp HHHHHTTCEEEEEECCT
T ss_pred HHHHHCCCEEEEEEccc
Confidence 99999999999888643
No 39
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.83 E-value=7.2e-20 Score=156.42 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=114.1
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC--CCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++. ...++++..+|+.++++++++||+|++..+++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 37889999999999999999987 689999999999999999885 23579999999999888888899999999999
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEccCCC-ch---h---HhhhhHHHh------hcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYP-TF---W---LSRYFADVW------MLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~-~~---~---~~~~~~~~~------~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
|++++..+++++.++|+|||.+++.....+ .. . ......... ..+++.+++.++|+++||+++.+..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTREV 195 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceEEE
Confidence 999999999999999999999988722111 11 0 111111110 1134678999999999999776644
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.83 E-value=9.8e-20 Score=157.93 Aligned_cols=157 Identities=17% Similarity=0.189 Sum_probs=121.2
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~~~~ 173 (290)
+...+++.+....++.+|||||||+|.++..+++.+| +.+|+|+|+|+.+++.++++.. ..+++++++|+.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~- 87 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN- 87 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-
Confidence 3334444433334789999999999999999999987 4899999999999999998743 23789999999998875
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC-----c------h-------hHhhhhH----HHhhcC
Q 022929 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP-----T------F-------WLSRYFA----DVWMLF 231 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~-----~------~-------~~~~~~~----~~~~~~ 231 (290)
++||+|++..+++|++++..+++++.++|||||.+++.++... . . .....+. .....+
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDG 167 (284)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCT
T ss_pred CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccc
Confidence 5799999999999999999999999999999999999877610 0 0 0001111 111224
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEc
Q 022929 232 PKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 232 ~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.+..++.++|+++||+.+++...
T Consensus 168 ~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 168 NIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp TGGGTHHHHHHHTTCEEEEEEEC
T ss_pred cHHHHHHHHHHHcCCCeEEEEEc
Confidence 46678999999999998877543
No 41
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.83 E-value=2.6e-20 Score=158.41 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=120.6
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCCCCcc
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPTDYAD 177 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~~~~D 177 (290)
..++..+.. .++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.++++... .+++++.+|+.++++++++||
T Consensus 83 ~~~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 83 RNFIASLPG-HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp HHHHHTSTT-CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEE
T ss_pred HHHHHhhcc-cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeE
Confidence 344444433 368899999999999999998874 56899999999999999988653 468999999988888888899
Q ss_pred EEEecCcccccCC--HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 178 RYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 178 ~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+|++..+++|+++ ...+++++.++|+|||.+++.++......... .......+++.+++.++|+++||+++++....
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV-DKEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE-ETTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccccee-cccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 9999999999954 67899999999999999999875332110000 00011224588999999999999999887753
No 42
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=1.5e-19 Score=156.19 Aligned_cols=141 Identities=21% Similarity=0.266 Sum_probs=116.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. .++.+..+|+.++++ +++||+|++..+++|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY--PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC--TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC--CCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 678999999999999999998 4789999999999999999886 578999999999887 46799999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCch-hHhhhhH----HH---------hhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFA----DV---------WMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~~~~~----~~---------~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
++..+++++.++|+|||.+++..+..... .....+. .. ...+++.+++.++|+++||++++++...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEEec
Confidence 99999999999999999999987654431 1111111 10 0135689999999999999998877653
No 43
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=1.5e-20 Score=161.31 Aligned_cols=167 Identities=13% Similarity=0.091 Sum_probs=117.2
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC-------------------------------
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK------------------------------- 157 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 157 (290)
.++.+|||||||+|.++..++.. +..+|+|+|+|+.+++.|+++....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 36789999999999887766655 1247999999999999998753211
Q ss_pred -Cce-EEEcCCCCC-CC---CCCCccEEEecCccccc-C---CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHH
Q 022929 158 -ECK-IVEGDAEDL-PF---PTDYADRYVSAGSIEYW-P---DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227 (290)
Q Consensus 158 -~v~-~~~~d~~~l-~~---~~~~~D~i~~~~~l~~~-~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~ 227 (290)
++. ++.+|+.+. |+ ..++||+|++..+++|+ + +...+++++.++|||||.+++.+........... ...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~-~~~ 211 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGK-REF 211 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT-EEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCC-eEe
Confidence 122 889999763 43 25689999999999986 3 3458999999999999999998654332110000 001
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEcCcccccccccccceeeeEEEEecCC
Q 022929 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPA 279 (290)
Q Consensus 228 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~k~~ 279 (290)
....++.+++.++|+++||+++++......+.......+.++ .++|+|+.
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~--~~~a~K~~ 261 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVC--CIVARKKP 261 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEE--EEEEEECC
T ss_pred eccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceE--EEEEEecC
Confidence 122458999999999999999999887644333332222232 47888863
No 44
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.82 E-value=1.6e-20 Score=155.00 Aligned_cols=139 Identities=9% Similarity=-0.030 Sum_probs=110.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---------------CCCceEEEcCCCCCCCCC-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---------------LKECKIVEGDAEDLPFPT- 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---------------~~~v~~~~~d~~~l~~~~- 173 (290)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++.. ..+++++++|+.++++.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 6789999999999999999998 6899999999999999987743 357999999999988764
Q ss_pred CCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 174 DYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
++||+|++..++++++.. ..+++++.++|||||.+++......... ... .....+.+++.+++++ ||+++.+
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---~~~--~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---LEG--PPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---SSS--CCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc---cCC--CCCCCCHHHHHHHhcC-CcEEEEe
Confidence 679999999999998754 4689999999999998555443322110 000 0112578999999998 9998888
Q ss_pred EEcCc
Q 022929 252 KRIGP 256 (290)
Q Consensus 252 ~~~~~ 256 (290)
+....
T Consensus 174 ~~~~~ 178 (203)
T 1pjz_A 174 GGQDT 178 (203)
T ss_dssp EESSC
T ss_pred ccccc
Confidence 77653
No 45
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=1.8e-19 Score=151.76 Aligned_cols=140 Identities=18% Similarity=0.067 Sum_probs=115.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .+++++.+|+.+++ ++++||+|++..++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFF 142 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESST
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhh
Confidence 4469999999999999999875 78999999999999999988653 35899999998876 44579999999999
Q ss_pred cccC--CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 186 EYWP--DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 186 ~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
++++ +...+++++.++|+|||.+++.+......... ....++.+++.++|+++||++++++......
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 211 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG------PPYKVDVSTFEEVLVPIGFKAVSVEENPHAI 211 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC------SSCCCCHHHHHHHHGGGTEEEEEEEECTTCC
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC------CCccCCHHHHHHHHHHcCCeEEEEEecCCcc
Confidence 9998 77899999999999999999876644321100 1123588999999999999999999876543
No 46
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.82 E-value=4.3e-20 Score=160.81 Aligned_cols=152 Identities=14% Similarity=0.179 Sum_probs=108.7
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHH----HHHhhCCCCeE--EEEeCCHHHHHHHhhhCC----CCCceE--EEcCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTL----GIVKHVDAKNV--TILDQSPHQLAKAKQKEP----LKECKI--VEGDAE 167 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~----~l~~~~~~~~v--~~vD~s~~~~~~a~~~~~----~~~v~~--~~~d~~ 167 (290)
.++..+....++.+|||||||+|.++. .++...++..+ +++|+|++|++.|+++.. ..++.+ ...+..
T Consensus 42 ~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 42 GIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp HHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred hHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 334433323467899999999997654 34444456644 999999999999987742 234444 344444
Q ss_pred CCC------CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHH--------hhcCCC
Q 022929 168 DLP------FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV--------WMLFPK 233 (290)
Q Consensus 168 ~l~------~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~--------~~~~~~ 233 (290)
+++ +++++||+|++.++++|++++.+.++++.++|||||.+++........+. ..+... ...+++
T Consensus 122 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 122 EYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWD-KLWKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp HHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHH-HHHHHHGGGSCCCTTCCCCC
T ss_pred hhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHH-HHHHHHHHhccCCCcccCCC
Confidence 332 45678999999999999999999999999999999999998655432211 111111 124578
Q ss_pred HHHHHHHHHHCCCcEEEEE
Q 022929 234 EEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 234 ~~~~~~ll~~aGf~~v~~~ 252 (290)
.++|.++|+++||+++...
T Consensus 201 ~~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEE
Confidence 9999999999999987643
No 47
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.82 E-value=1.4e-19 Score=149.71 Aligned_cols=128 Identities=23% Similarity=0.270 Sum_probs=107.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+ +..+++++|+|+.+++.++++. .+++++.+|+.++++++++||+|++..+++|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--PEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 6789999999999998777 2239999999999999999887 578999999999888888899999999999999
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhH--------HHhhcCCCHHHHHHHHHHCC
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA--------DVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ll~~aG 245 (290)
++.++++++.++|||||.+++.++.....+...... .....+++.+++.++|+ |
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 999999999999999999999987765433211110 11234679999999999 7
No 48
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.82 E-value=2.7e-20 Score=156.84 Aligned_cols=138 Identities=20% Similarity=0.244 Sum_probs=108.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEe-cCccccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVS-AGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~-~~~l~~~ 188 (290)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.++++. .+++++.+|+.++++ +++||+|+| ..+++|+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~--~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL--PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC--TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC--CCCEEEECCHHHccc-CCCCcEEEEcCchHhhc
Confidence 67899999999999999999984 49999999999999999886 368999999988877 567999996 5599998
Q ss_pred CCH---HHHHHHHHhccCCCCEEEEEccCCCchhHhh---------------------------------hhH-------
Q 022929 189 PDP---QRGIREAYRVLKLGGKACIIGPVYPTFWLSR---------------------------------YFA------- 225 (290)
Q Consensus 189 ~~~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---------------------------------~~~------- 225 (290)
+++ ..+++++.++|+|||.+++.++..+...... ...
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVR 194 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcce
Confidence 653 5799999999999999999765433211000 000
Q ss_pred ----HHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 226 ----DVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 226 ----~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
..+..+++.+++.++|+++||+++.+.
T Consensus 195 ~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~ 225 (239)
T 3bxo_A 195 HFSDVHLITLFHQAEYEAAFTAAGLRVEYLE 225 (239)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred EEEEEEEeeecCHHHHHHHHHHCCCEEEEeE
Confidence 001245799999999999999766554
No 49
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.82 E-value=4.5e-20 Score=157.84 Aligned_cols=166 Identities=16% Similarity=0.206 Sum_probs=124.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCC-------------------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE------------------------------- 158 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------------------------- 158 (290)
++.+|||||||+|.++..++.... .+|+|+|+|+.+++.++++....+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 678999999999999998887732 499999999999999988755433
Q ss_pred -c-eEEEcCCCCCC-CCC---CCccEEEecCccc----ccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHh
Q 022929 159 -C-KIVEGDAEDLP-FPT---DYADRYVSAGSIE----YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228 (290)
Q Consensus 159 -v-~~~~~d~~~l~-~~~---~~~D~i~~~~~l~----~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 228 (290)
+ .+...|+.+.+ +++ ++||+|++..+++ +.+++..+++++.++|||||.+++.+.......... .....
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~-~~~~~ 213 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG-EQKFS 213 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET-TEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC-Ccccc
Confidence 6 89999997753 344 7899999999999 555677899999999999999999875433211100 00012
Q ss_pred hcCCCHHHHHHHHHHCCCcEEEEEEcCcccccccccccceeeeEEEEecCC
Q 022929 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPA 279 (290)
Q Consensus 229 ~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~k~~ 279 (290)
...++.+++.++|+++||+++++.....++...+.....+. .++|+|+.
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~--~~~a~K~~ 262 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLF--SLVGRKPG 262 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEE--EEEEECCC
T ss_pred ccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEE--EEEecccc
Confidence 23458899999999999999999987755544443333332 57888864
No 50
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=9e-20 Score=151.76 Aligned_cols=146 Identities=12% Similarity=0.015 Sum_probs=110.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--------CCceEEEcCCCCCCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------KECKIVEGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~v~~~~~d~~~l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.++++... .+++++.+|+...+...++||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 67899999999999999999986668999999999999999987532 1689999999877766678999999
Q ss_pred cCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCch-----hHhhhhHHHhhcCCCHHHHH----HHHHHCCCcEEE
Q 022929 182 AGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTF-----WLSRYFADVWMLFPKEEEYI----EWFQKAGFKDVQ 250 (290)
Q Consensus 182 ~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~ll~~aGf~~v~ 250 (290)
..+++|++++ ..+++++.++|||||.+++........ .........+...++.+++. ++++++||+++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~- 187 (217)
T 3jwh_A 109 IEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ- 187 (217)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE-
T ss_pred HHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE-
Confidence 9999999866 789999999999999766654311000 00001111122335888888 99999999754
Q ss_pred EEEcCc
Q 022929 251 LKRIGP 256 (290)
Q Consensus 251 ~~~~~~ 256 (290)
...++.
T Consensus 188 ~~~~g~ 193 (217)
T 3jwh_A 188 FQPIGE 193 (217)
T ss_dssp ECCCSC
T ss_pred EEecCC
Confidence 344443
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.81 E-value=2e-19 Score=158.30 Aligned_cols=157 Identities=22% Similarity=0.274 Sum_probs=123.5
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPFP 172 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~~ 172 (290)
....+++.+... ++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.++++... .++++..+|+.+++
T Consensus 78 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 78 KVDLNLDKLDLK-PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHTTSCCC-TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred HHHHHHHhcCCC-CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 344555555543 78899999999999999999886 57999999999999999887432 45899999998765
Q ss_pred CCCccEEEecCccccc--CCHHHHHHHHHhccCCCCEEEEEccCCCchhHh---------------hhhHHH---hhcCC
Q 022929 173 TDYADRYVSAGSIEYW--PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---------------RYFADV---WMLFP 232 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---------------~~~~~~---~~~~~ 232 (290)
++||+|++..+++|+ +++..+++++.++|||||.+++.++........ ..+... ...++
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 569999999999999 567899999999999999999988766543211 111100 12346
Q ss_pred CHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 233 KEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 233 ~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
+.+++.++++++||++++++.++.++
T Consensus 233 s~~~~~~~l~~aGf~~~~~~~~~~~y 258 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPLSLRPHY 258 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCEECHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEecchhH
Confidence 89999999999999999988876543
No 52
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.81 E-value=8.3e-19 Score=156.72 Aligned_cols=164 Identities=26% Similarity=0.362 Sum_probs=127.7
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCc
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYA 176 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~ 176 (290)
.++...... +..+|||||||+|.++..+++.+|+.+++..|+ +.+++.|+++.. ..+++++.+|+.+.+.+ .+
T Consensus 170 ~~~~~~~~~-~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~ 245 (353)
T 4a6d_A 170 SVLTAFDLS-VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EA 245 (353)
T ss_dssp HHHHSSCGG-GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CC
T ss_pred HHHHhcCcc-cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--Cc
Confidence 344444433 568999999999999999999999999999998 899999988754 35799999999876654 38
Q ss_pred cEEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCch----hHhhhhHHHh------hcCCCHHHHHHHHHHC
Q 022929 177 DRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTF----WLSRYFADVW------MLFPKEEEYIEWFQKA 244 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~ll~~a 244 (290)
|++++.+++|++++.+ ++|+++++.|+|||++++.+...+.. .....+ +.. ..-+|.++|.++|+++
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~-dl~ml~~~~g~ert~~e~~~ll~~A 324 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLY-SLNMLVQTEGQERTPTHYHMLLSSA 324 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHH-HHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHH-HHHHHHhCCCcCCCHHHHHHHHHHC
Confidence 9999999999999874 68999999999999999998764421 111111 111 1236899999999999
Q ss_pred CCcEEEEEEcCcccccccccccceeeeEEEEecCCC
Q 022929 245 GFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPAS 280 (290)
Q Consensus 245 Gf~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~k~~~ 280 (290)
||+.+++.+.+..+ . .|+|+|.+-
T Consensus 325 Gf~~v~v~~~~~~~---------~---~i~ArKgt~ 348 (353)
T 4a6d_A 325 GFRDFQFKKTGAIY---------D---AILARKGTH 348 (353)
T ss_dssp TCEEEEEECCSSSC---------E---EEEEECCCC
T ss_pred CCceEEEEEcCCce---------E---EEEEEecCc
Confidence 99999988765322 1 478888764
No 53
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.81 E-value=8.4e-21 Score=173.32 Aligned_cols=226 Identities=16% Similarity=0.135 Sum_probs=145.8
Q ss_pred eecccCCCCCccccCCcCCCCCCccccccCCceeeeeecccccCCCCCCchhHhhhhHHHHHHHhHHhHhhhcccCCCcc
Q 022929 14 LIRGMTPKGSSFLASDFHGKHIPKLSLIAKPRTVQSIKCSLSATSRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHW 93 (290)
Q Consensus 14 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (290)
+--|..|.+..|....... ..+.+.+ +...|..|.+.......+...... ..+.++......+.. .
T Consensus 26 ~~~~~~p~~~~~~~~~~~~-~~~~~~l----~~~~C~~Cg~v~~~~~~~~~~~y~---~~y~~~~~~~~~~~~------~ 91 (416)
T 4e2x_A 26 LDLGRQPLSDRFRKPDELD-DEFTYRL----AVGRCDSCEMVQLTEEVPRDLMFH---EVYPYHSSGSSVMRE------H 91 (416)
T ss_dssp EEEEEEECTTCCBCTTSCS-CCCEEEE----EEEEETTTCCEEESSCCCHHHHSS---TTCCCCGGGCHHHHH------H
T ss_pred eECCCCCccccCCChhhcC-ccceecc----eEEECCCCCceeecCcCCHHHhcc---CCccCcCcCCHHHHH------H
Confidence 3445666666666554433 3333333 334777787774433332222111 011111111111111 1
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCc-eEEEcCCCCCCCC
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KIVEGDAEDLPFP 172 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v-~~~~~d~~~l~~~ 172 (290)
...+...+++.+... ++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++...... .+...+...++++
T Consensus 92 ~~~~~~~l~~~~~~~-~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 92 FAMLARDFLATELTG-PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRT 168 (416)
T ss_dssp HHHHHHHHHHTTTCS-SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccC
Confidence 233455555655543 7889999999999999999987 67999999999999999976221111 1222333444555
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHH---hhcCCCHHHHHHHHHHCCCcEE
Q 022929 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV---WMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~aGf~~v 249 (290)
+++||+|++.++++|++++..+++++.++|||||.+++..+..........+... +..+++.+++.++++++||+++
T Consensus 169 ~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELV 248 (416)
T ss_dssp HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEE
T ss_pred CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEE
Confidence 6789999999999999999999999999999999999987654332222222221 2235799999999999999999
Q ss_pred EEEEcCc
Q 022929 250 QLKRIGP 256 (290)
Q Consensus 250 ~~~~~~~ 256 (290)
+++.++.
T Consensus 249 ~~~~~~~ 255 (416)
T 4e2x_A 249 DVQRLPV 255 (416)
T ss_dssp EEEEECG
T ss_pred EEEEccC
Confidence 9988753
No 54
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=1.1e-19 Score=151.32 Aligned_cols=146 Identities=15% Similarity=0.063 Sum_probs=110.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--------CCceEEEcCCCCCCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------KECKIVEGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~v~~~~~d~~~l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.++++... .+++++.+|+...+..+++||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 67899999999999999999987668999999999999999987532 1789999999887777778999999
Q ss_pred cCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCC-----chhHhhhhHHHhhcCCCHHHHH----HHHHHCCCcEEE
Q 022929 182 AGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYP-----TFWLSRYFADVWMLFPKEEEYI----EWFQKAGFKDVQ 250 (290)
Q Consensus 182 ~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~ll~~aGf~~v~ 250 (290)
..+++|++++ ..+++++.++|||||.++....... ...........+...++.+++. ++++++||++.
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~- 187 (219)
T 3jwg_A 109 IEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR- 187 (219)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE-
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE-
Confidence 9999999866 6899999999999996655432111 0111111111122335888888 88999999654
Q ss_pred EEEcCc
Q 022929 251 LKRIGP 256 (290)
Q Consensus 251 ~~~~~~ 256 (290)
...++.
T Consensus 188 ~~~~g~ 193 (219)
T 3jwg_A 188 FLQIGE 193 (219)
T ss_dssp EEEESC
T ss_pred EEecCC
Confidence 444544
No 55
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.81 E-value=1.5e-19 Score=148.67 Aligned_cols=149 Identities=20% Similarity=0.105 Sum_probs=114.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++ +|||||||+|.++..+++. +.+++++|+|+.+++.++++... .++.++.+|+.++++++++||+|++.....+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 55 9999999999999999887 67999999999999999877431 2688999999988887788999999543222
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcccccccc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVR 263 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~ 263 (290)
..+...+++++.++|+|||.+++.++.................+++.+++.++|+ ||++++++........+..
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~~~~g~~ 180 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLERNLDEGAY 180 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEECSCSSS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEeecCCCCC
Confidence 2356789999999999999999988765443211111111234679999999999 9999999887665444433
No 56
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.81 E-value=4.5e-19 Score=148.12 Aligned_cols=142 Identities=22% Similarity=0.268 Sum_probs=117.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC--CCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED--LPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~--l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. ++..+|+.+ .++++++||+|++..+++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKLD----HVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTSS----EEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCC----cEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 7889999999999999999988 4899999999999999997653 788999876 5677778999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh-hhH------------HHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YFA------------DVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
++++..+++++.++|+|||.+++..+......... ... ..+..+++.+++.++++++||+++++..+
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 99999999999999999999999877654332111 111 11124568999999999999999999886
Q ss_pred Ccc
Q 022929 255 GPK 257 (290)
Q Consensus 255 ~~~ 257 (290)
...
T Consensus 186 ~~~ 188 (230)
T 3cc8_A 186 YVD 188 (230)
T ss_dssp ECC
T ss_pred ccC
Confidence 543
No 57
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.81 E-value=1.3e-18 Score=154.18 Aligned_cols=153 Identities=22% Similarity=0.174 Sum_probs=120.5
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~ 175 (290)
.++...... +..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.. ..++++..+|+.+ +++. +
T Consensus 160 ~~~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~-~ 235 (332)
T 3i53_A 160 GIAAKYDWA-ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPA-G 235 (332)
T ss_dssp TGGGSSCCG-GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCC-S
T ss_pred HHHHhCCCC-CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCC-C
Confidence 344444432 568999999999999999999999999999999 999999987632 3579999999973 5555 6
Q ss_pred ccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCch----hHhhh-hHHHhhcCCCHHHHHHHHHHCCCcE
Q 022929 176 ADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTF----WLSRY-FADVWMLFPKEEEYIEWFQKAGFKD 248 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~ll~~aGf~~ 248 (290)
||+|++.+++|+++++ .+++++++++|+|||++++.+...+.. ..... +.......++.++|.++|+++||++
T Consensus 236 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 236 AGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred CcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 9999999999999986 689999999999999999988765542 11100 1111223579999999999999999
Q ss_pred EEEEEcCc
Q 022929 249 VQLKRIGP 256 (290)
Q Consensus 249 v~~~~~~~ 256 (290)
+++...+.
T Consensus 316 ~~~~~~~~ 323 (332)
T 3i53_A 316 RAAHPISY 323 (332)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99987654
No 58
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.81 E-value=6.2e-19 Score=149.31 Aligned_cols=143 Identities=14% Similarity=-0.017 Sum_probs=114.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCC-----CCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT-----DYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~-----~~~D~i~~~~ 183 (290)
.++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++++....+++++++|+.+++... ..||+|++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFF--PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHS--SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhC--CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 478899999999999999999984 499999999999999999987678999999998865322 2489999999
Q ss_pred cccccC--CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhH-----------HHh-----hcCCCHHHHHHHHHHCC
Q 022929 184 SIEYWP--DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA-----------DVW-----MLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 184 ~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~-----------~~~-----~~~~~~~~~~~ll~~aG 245 (290)
++++++ +...+++++.++|||||.+++.+............. ... ...++.+++.+++ +|
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aG 210 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PD 210 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TT
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CC
Confidence 999998 678999999999999999999887655322111100 000 1235889999999 89
Q ss_pred CcEEEEEEcC
Q 022929 246 FKDVQLKRIG 255 (290)
Q Consensus 246 f~~v~~~~~~ 255 (290)
|++++...+.
T Consensus 211 f~~~~~~~~~ 220 (245)
T 3ggd_A 211 FEILSQGEGL 220 (245)
T ss_dssp EEEEEEECCB
T ss_pred CEEEeccccc
Confidence 9999887664
No 59
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.80 E-value=1.9e-18 Score=155.32 Aligned_cols=152 Identities=20% Similarity=0.277 Sum_probs=120.6
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCC
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~ 174 (290)
..+++..... +..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.. ..++++..+|+. .+++.
T Consensus 192 ~~l~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 192 GQVAAAYDFS-GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHHSCCT-TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-
T ss_pred HHHHHhCCCc-cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-
Confidence 3444444433 678999999999999999999999999999999 999999987632 357999999998 35655
Q ss_pred CccEEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchh--HhhhhH-----HHhhcCCCHHHHHHHHHHCC
Q 022929 175 YADRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFW--LSRYFA-----DVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~ll~~aG 245 (290)
+||+|++.+++|++++.. ++++++.+.|+|||++++.+...+... .....+ ......++.++|.++|+++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 699999999999999876 799999999999999999876654311 111111 11123478999999999999
Q ss_pred CcEEEEEEc
Q 022929 246 FKDVQLKRI 254 (290)
Q Consensus 246 f~~v~~~~~ 254 (290)
|+++++...
T Consensus 348 f~~~~~~~~ 356 (369)
T 3gwz_A 348 LRVERSLPC 356 (369)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999999773
No 60
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.80 E-value=2.5e-19 Score=151.24 Aligned_cols=170 Identities=24% Similarity=0.315 Sum_probs=121.9
Q ss_pred HHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 76 FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
.|+.++..|+....... ...+...+...+. ++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|+++..
T Consensus 3 ~y~~~a~~yd~~~~~~~-~~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDVP-YPEWVAWVLEQVE---PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp ---CTTHHHHHHTTTCC-HHHHHHHHHHHSC---TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhccc-HHHHHHHHHHHcC---CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhh
Confidence 45566667776554332 2344444444443 5689999999999999999876 699999999999999987743
Q ss_pred --CCCceEEEcCCCCCCCCCCCccEEEecC-cccccCC---HHHHHHHHHhccCCCCEEEEEccCCCchh----------
Q 022929 156 --LKECKIVEGDAEDLPFPTDYADRYVSAG-SIEYWPD---PQRGIREAYRVLKLGGKACIIGPVYPTFW---------- 219 (290)
Q Consensus 156 --~~~v~~~~~d~~~l~~~~~~~D~i~~~~-~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~---------- 219 (290)
..+++++.+|+.+++++ ++||+|++.. +++|+.+ ...+++++.++|+|||.+++..+......
T Consensus 76 ~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 154 (243)
T 3d2l_A 76 ETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYAT 154 (243)
T ss_dssp HTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEE
T ss_pred hcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeE
Confidence 24689999999887766 6799999986 9999844 45799999999999999988543211000
Q ss_pred ---------Hh------h-------hh----H--------HHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 220 ---------LS------R-------YF----A--------DVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 220 ---------~~------~-------~~----~--------~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
.. . .+ . .....+++.+++.++|+++||+++++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 155 HAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp ECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 00 0 00 0 0112357999999999999999988865
No 61
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.80 E-value=1.1e-19 Score=158.76 Aligned_cols=175 Identities=17% Similarity=0.189 Sum_probs=120.0
Q ss_pred HHhHHh-HhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC
Q 022929 76 FYRFLS-IVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE 154 (290)
Q Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~ 154 (290)
+|+... ..|+....... .......++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.
T Consensus 50 ~y~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~--~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~ 124 (299)
T 3g2m_A 50 FYDEGAADTYRDLIQDAD-GTSEAREFATRTGP--VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRL 124 (299)
T ss_dssp CC--------------CC-CHHHHHHHHHHHCC--CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHhcccC-ccHHHHHHHHhhCC--CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHH
Confidence 344443 55555544221 23344445555443 4459999999999999999998 689999999999999999875
Q ss_pred CC------CCceEEEcCCCCCCCCCCCccEEEec-CcccccCC--HHHHHHHHHhccCCCCEEEEEccCCCchhHh----
Q 022929 155 PL------KECKIVEGDAEDLPFPTDYADRYVSA-GSIEYWPD--PQRGIREAYRVLKLGGKACIIGPVYPTFWLS---- 221 (290)
Q Consensus 155 ~~------~~v~~~~~d~~~l~~~~~~~D~i~~~-~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---- 221 (290)
.. .+++++++|+.++++ +++||+|++. .++++++. ...+++++.++|+|||.+++..+........
T Consensus 125 ~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 203 (299)
T 3g2m_A 125 AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLER 203 (299)
T ss_dssp HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC
T ss_pred hhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhc
Confidence 43 468999999999887 5679999865 55666653 4689999999999999999987654322000
Q ss_pred ---------h---hh--------------------------HHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 222 ---------R---YF--------------------------ADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 222 ---------~---~~--------------------------~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
. .. ......+++.+++.++|+++||+++++..+..
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 204 KQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp -------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred cceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 0 00 00011246999999999999999999998764
No 62
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=6.3e-19 Score=150.16 Aligned_cols=138 Identities=12% Similarity=0.002 Sum_probs=109.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--------------------CCCceEEEcCCCCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------------------LKECKIVEGDAEDL 169 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------------------~~~v~~~~~d~~~l 169 (290)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++.. ..+++++++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 6789999999999999999988 7899999999999999986642 25789999999998
Q ss_pred CCCC-CCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCC
Q 022929 170 PFPT-DYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 170 ~~~~-~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 246 (290)
+..+ ++||+|++..++++++.. ..+++++.++|||||.+++.+........ .. .....+.+++.++++. +|
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----~g-~~~~~~~~el~~~l~~-~f 219 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----AG-PPFYVPSAELKRLFGT-KC 219 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----CC-SSCCCCHHHHHHHHTT-TE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----CC-CCCCCCHHHHHHHhhC-Ce
Confidence 8653 689999999999988643 57999999999999999765433221100 00 0112588999999987 59
Q ss_pred cEEEEEEcC
Q 022929 247 KDVQLKRIG 255 (290)
Q Consensus 247 ~~v~~~~~~ 255 (290)
+++..+...
T Consensus 220 ~v~~~~~~~ 228 (252)
T 2gb4_A 220 SMQCLEEVD 228 (252)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeccc
Confidence 988887654
No 63
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=8.1e-19 Score=157.88 Aligned_cols=144 Identities=21% Similarity=0.270 Sum_probs=114.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.. ..+++++.+|+.+ +++.+ ||+|++.+++
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl 258 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLSFVL 258 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEeccc
Confidence 678999999999999999999988899999999 999999987632 2379999999976 44444 9999999999
Q ss_pred cccCCHH--HHHHHHHhccCCCCEEEEEcc--CCCch---hHhhhhHHH-----hhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 186 EYWPDPQ--RGIREAYRVLKLGGKACIIGP--VYPTF---WLSRYFADV-----WMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 186 ~~~~~~~--~~l~~~~~~L~pgG~l~i~~~--~~~~~---~~~~~~~~~-----~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
|++++.. .+++++.++|+|||.+++.+. ..+.. ......... ....++.++|.++|+++||+++++..
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 9998875 899999999999999999887 43221 111111111 12347999999999999999999988
Q ss_pred cCc
Q 022929 254 IGP 256 (290)
Q Consensus 254 ~~~ 256 (290)
.+.
T Consensus 339 ~~~ 341 (374)
T 1qzz_A 339 SGS 341 (374)
T ss_dssp ECC
T ss_pred CCC
Confidence 753
No 64
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=4.3e-19 Score=151.58 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=98.4
Q ss_pred HhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC
Q 022929 77 YRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 156 (290)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 156 (290)
|+..+..|+.. +|. +...+.+.+.+... ...+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++ .
T Consensus 11 F~~~a~~Y~~~-Rp~-yp~~l~~~l~~~~~---~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~---~ 80 (257)
T 4hg2_A 11 FTPVADAYRAF-RPR-YPRALFRWLGEVAP---ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR---H 80 (257)
T ss_dssp ---------CC-CCC-CCHHHHHHHHHHSS---CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC---C
T ss_pred HHHHHHHHHHH-CCC-cHHHHHHHHHHhcC---CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh---c
Confidence 44556666653 222 34555555554443 4679999999999999999988 6799999999999998874 3
Q ss_pred CCceEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 157 KECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 157 ~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
.+++++++|++++++++++||+|++..++||. +++++++++.++|||||.|++.+...
T Consensus 81 ~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 57999999999999999999999999999776 57889999999999999999876544
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.79 E-value=1.3e-18 Score=154.21 Aligned_cols=144 Identities=17% Similarity=0.199 Sum_probs=117.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||||||+|.++..+++.+|+.+++++|++ .+++.|+++.. ..+++++.+|+.+.+++++ ||+|++.+++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 6789999999999999999999888999999999 99999987632 2469999999988776655 9999999999
Q ss_pred cccCCH--HHHHHHHHhccCCCCEEEEEccCCCch----hHhhhhHH---H---hhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 186 EYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTF----WLSRYFAD---V---WMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 186 ~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~----~~~~~~~~---~---~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
+++++. .++++++.++|+|||.+++.+...+.. .....+.- . ....++.++|.++++++||+++++..
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 999655 589999999999999999987765421 11111110 0 22457899999999999999999877
Q ss_pred cC
Q 022929 254 IG 255 (290)
Q Consensus 254 ~~ 255 (290)
++
T Consensus 323 ~~ 324 (335)
T 2r3s_A 323 LP 324 (335)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=3.4e-19 Score=145.76 Aligned_cols=137 Identities=18% Similarity=0.212 Sum_probs=110.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. ..+++++..|+.++++ +++||+|++..+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 5679999999999999999988 6799999999999999987632 2368999999988877 67899999999999
Q ss_pred ccC--CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 187 YWP--DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 187 ~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
|++ +...+++++.++|+|||.+++.+......... .......++.+++.+++++ |++++.++.
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC---TVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---CSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC---CCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 997 67899999999999999988876543221100 0112234588999999986 999888765
No 67
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.79 E-value=4.5e-19 Score=152.69 Aligned_cols=156 Identities=11% Similarity=0.041 Sum_probs=119.2
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHH------HHHHHhhhCCC----CCceEEEcC---
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPH------QLAKAKQKEPL----KECKIVEGD--- 165 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~------~~~~a~~~~~~----~~v~~~~~d--- 165 (290)
.+++.+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+. +++.|+++... .+++++.+|
T Consensus 34 ~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 34 AIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 34444443 378999999999999999999985 4589999999997 88888877432 468999998
Q ss_pred CCCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchh---Hhh----hhHH-----------H
Q 022929 166 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW---LSR----YFAD-----------V 227 (290)
Q Consensus 166 ~~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~---~~~----~~~~-----------~ 227 (290)
...+++++++||+|++..+++|++++..+++.+.++++|||.+++.+....... ... .... .
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVAN 192 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCS
T ss_pred hccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccc
Confidence 345566778899999999999999998888888888888999999876543211 001 0000 1
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 228 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
...+++.+++.++++++||++++++.+..
T Consensus 193 ~~~~~s~~~l~~~l~~aGf~~~~~~~~~~ 221 (275)
T 3bkx_A 193 IRTLITPDTLAQIAHDNTWTYTAGTIVED 221 (275)
T ss_dssp CCCCCCHHHHHHHHHHHTCEEEECCCBCC
T ss_pred ccccCCHHHHHHHHHHCCCeeEEEEEecC
Confidence 11357899999999999999998887743
No 68
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.79 E-value=3.5e-19 Score=154.78 Aligned_cols=144 Identities=21% Similarity=0.224 Sum_probs=106.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--------------------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-------------------------------- 157 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 157 (290)
++.+|||||||+|.....++.. ++.+|+|+|+|+.+++.|+++....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 6789999999999955444443 3679999999999999988753211
Q ss_pred -CceEEEcCCCC-CCC-----CCCCccEEEecCcccc----cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHH
Q 022929 158 -ECKIVEGDAED-LPF-----PTDYADRYVSAGSIEY----WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226 (290)
Q Consensus 158 -~v~~~~~d~~~-l~~-----~~~~~D~i~~~~~l~~----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 226 (290)
.++++.+|+.+ +|+ ++++||+|++..++++ .+++..+++++.++|||||.+++.......+.... ...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~-~~~ 228 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAG-EAR 228 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEET-TEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcC-Cee
Confidence 03466678876 553 3456999999999999 55678999999999999999999753322211000 000
Q ss_pred HhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 227 VWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 227 ~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
....+++.+++.++|+++||+++++..+.
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 11235689999999999999999988776
No 69
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.78 E-value=1.3e-18 Score=155.99 Aligned_cols=143 Identities=16% Similarity=0.207 Sum_probs=114.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCC--CCCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDL--PFPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l--~~~~~~~D~i~~~~ 183 (290)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++... .+++++.+|+.+. |++ ++||+|++.+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 568999999999999999999999999999999 9999999987442 3699999999875 455 5699999999
Q ss_pred cccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchhHhh-----hhHHH--------hhcCCCHHHHHHHHHHCCCcE
Q 022929 184 SIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFWLSR-----YFADV--------WMLFPKEEEYIEWFQKAGFKD 248 (290)
Q Consensus 184 ~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~~ll~~aGf~~ 248 (290)
++|++++.+ ++++++.++|+|||.+++.+...+...... ..... ....++.++|.++|+++||++
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 999998764 789999999999999999887654321110 00000 112468999999999999998
Q ss_pred EEEEEc
Q 022929 249 VQLKRI 254 (290)
Q Consensus 249 v~~~~~ 254 (290)
+++...
T Consensus 337 v~~~~~ 342 (363)
T 3dp7_A 337 EEIQDN 342 (363)
T ss_dssp SCCCCC
T ss_pred EEEEeC
Confidence 877643
No 70
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.78 E-value=3.2e-18 Score=152.80 Aligned_cols=150 Identities=18% Similarity=0.135 Sum_probs=116.3
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCC--CCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLP--FPT 173 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~--~~~ 173 (290)
.+++.+.....+.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++.. ..+++++.+|+.+.+ .+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 246 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG- 246 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT-
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC-
Confidence 3444444432378999999999999999999999999999999 889988887632 246999999998765 44
Q ss_pred CCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchh----HhhhhHH------HhhcCCCHHHHHHHH
Q 022929 174 DYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFW----LSRYFAD------VWMLFPKEEEYIEWF 241 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~ll 241 (290)
++||+|++.+++|++++. ..+++++.++|+|||.+++.+...+... ....+.- .....++.++|.++|
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVV 326 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHH
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHH
Confidence 459999999999999876 6899999999999999999876543211 1111110 012357899999999
Q ss_pred HHCCCcEEEE
Q 022929 242 QKAGFKDVQL 251 (290)
Q Consensus 242 ~~aGf~~v~~ 251 (290)
+++||++++.
T Consensus 327 ~~aGf~~~~~ 336 (352)
T 3mcz_A 327 RDAGLAVGER 336 (352)
T ss_dssp HHTTCEEEEE
T ss_pred HHCCCceeee
Confidence 9999998873
No 71
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.78 E-value=8.3e-18 Score=151.06 Aligned_cols=151 Identities=22% Similarity=0.232 Sum_probs=118.0
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccE
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADR 178 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~ 178 (290)
..++..+....+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++ .+++++.+|+.+ +++.+ |+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF---SGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCCC--SE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc---CCCEEEecCCCC-CCCCC--CE
Confidence 34455444223678999999999999999999999999999999 8888877643 579999999987 66654 99
Q ss_pred EEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchh-------HhhhhH--HH----hhcCCCHHHHHHHHHH
Q 022929 179 YVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFW-------LSRYFA--DV----WMLFPKEEEYIEWFQK 243 (290)
Q Consensus 179 i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~-------~~~~~~--~~----~~~~~~~~~~~~ll~~ 243 (290)
|++.+++|++++.+ +++++++++|+|||++++.+...+... ....++ .. ....++.++|.++|++
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~ 344 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMA 344 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHH
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHH
Confidence 99999999998765 799999999999999999887643211 001111 00 1234689999999999
Q ss_pred CCCcEEEEEEcCc
Q 022929 244 AGFKDVQLKRIGP 256 (290)
Q Consensus 244 aGf~~v~~~~~~~ 256 (290)
+||+++++.....
T Consensus 345 AGF~~v~~~~~~~ 357 (368)
T 3reo_A 345 SGFRGFKVASCAF 357 (368)
T ss_dssp TTCCEEEEEEEET
T ss_pred CCCeeeEEEEeCC
Confidence 9999999887653
No 72
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.78 E-value=5.5e-19 Score=152.58 Aligned_cols=165 Identities=22% Similarity=0.285 Sum_probs=127.9
Q ss_pred hhHHHHHHHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHH
Q 022929 69 HKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLA 148 (290)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~ 148 (290)
+..+...|++....+....+.+++.++.+...+++.+. .++.+|||+|||+|.++..+++..|+.+++++|+|+.+++
T Consensus 70 ~i~g~~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~ 147 (276)
T 2b3t_A 70 HLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVS 147 (276)
T ss_dssp HHSCEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHH
T ss_pred HeeeeeEECCceEEeCCCCcccCchHHHHHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHH
Confidence 33333345554444556677888888989888887765 3678999999999999999998888899999999999999
Q ss_pred HHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEec-------------CcccccC------------CHHHHHHHHHh
Q 022929 149 KAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSA-------------GSIEYWP------------DPQRGIREAYR 200 (290)
Q Consensus 149 ~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~-------------~~l~~~~------------~~~~~l~~~~~ 200 (290)
.++++.. ..+++++++|+.+ ++++++||+|+++ .+++|.+ ....+++++.+
T Consensus 148 ~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~ 226 (276)
T 2b3t_A 148 LAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRN 226 (276)
T ss_dssp HHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHH
Confidence 9998742 2468999999976 3445679999997 3444443 23578999999
Q ss_pred ccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 201 VLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 201 ~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
+|+|||.+++... +.+.+++.++++++||+.+++..
T Consensus 227 ~LkpgG~l~~~~~-----------------~~~~~~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 227 ALVSGGFLLLEHG-----------------WQQGEAVRQAFILAGYHDVETCR 262 (276)
T ss_dssp GEEEEEEEEEECC-----------------SSCHHHHHHHHHHTTCTTCCEEE
T ss_pred hcCCCCEEEEEEC-----------------chHHHHHHHHHHHCCCcEEEEEe
Confidence 9999999998742 22568899999999998766554
No 73
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.77 E-value=9.2e-18 Score=150.28 Aligned_cols=152 Identities=22% Similarity=0.277 Sum_probs=118.9
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~ 175 (290)
.+++.+.. .++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++.. .++++++.+|+.+.++++
T Consensus 181 ~l~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 256 (359)
T 1x19_A 181 LLLEEAKL-DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-- 256 (359)
T ss_dssp HHHHHCCC-TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--
T ss_pred HHHHhcCC-CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--
Confidence 34444443 3678999999999999999999998899999999 999999987632 245999999998877654
Q ss_pred ccEEEecCcccccCC--HHHHHHHHHhccCCCCEEEEEccCCCch---hHhhhhHH---Hh-h----cCCCHHHHHHHHH
Q 022929 176 ADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACIIGPVYPTF---WLSRYFAD---VW-M----LFPKEEEYIEWFQ 242 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~---~~~~~~~~---~~-~----~~~~~~~~~~ll~ 242 (290)
+|+|++.++++++++ ..++++++.++|+|||.+++.+...+.. .....+.. .. . .+++.++|.++|+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 499999999999987 5789999999999999999887554321 01111100 00 1 2378999999999
Q ss_pred HCCCcEEEEEEcC
Q 022929 243 KAGFKDVQLKRIG 255 (290)
Q Consensus 243 ~aGf~~v~~~~~~ 255 (290)
++||+++++..++
T Consensus 337 ~aGf~~v~~~~~~ 349 (359)
T 1x19_A 337 SLGYKDVTMVRKY 349 (359)
T ss_dssp HHTCEEEEEEEET
T ss_pred HCCCceEEEEecC
Confidence 9999999988765
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=9.8e-18 Score=136.28 Aligned_cols=127 Identities=22% Similarity=0.195 Sum_probs=110.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEec-Cccccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA-GSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~-~~l~~~ 188 (290)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.. +++++..|+.++++++++||+|++. .++++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~--~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP--EARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT--TSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC--CCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 7789999999999999999988 6799999999999999998874 6899999998888777889999998 788887
Q ss_pred CC--HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 189 PD--PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 189 ~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
+. ...+++++.++|+|||.+++..+.... ++.+++.++++++||++++....
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~--------------~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRG--------------WVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSS--------------CCHHHHHHHHHHHTEEEEEEESS
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC--------------cCHHHHHHHHHHcCCEEeeeecc
Confidence 43 468999999999999999997654322 37889999999999998877654
No 75
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.77 E-value=7.3e-18 Score=149.39 Aligned_cols=153 Identities=19% Similarity=0.234 Sum_probs=120.2
Q ss_pred HHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCC
Q 022929 98 RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 98 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~ 173 (290)
...+++..... + .+|||||||+|..+..+++.+|+.+++++|+ +.+++.++++.. ..+++++.+|+.+ +++
T Consensus 157 ~~~~~~~~~~~-~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 157 FHEIPRLLDFR-G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHSCCT-T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHhCCCC-C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 34445544443 4 8999999999999999999998899999999 999999988753 2579999999977 555
Q ss_pred CCccEEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCc---hhHhhhhHH-----HhhcCCCHHHHHHHHHH
Q 022929 174 DYADRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPT---FWLSRYFAD-----VWMLFPKEEEYIEWFQK 243 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~ll~~ 243 (290)
++||+|++.+++|++++.. ++++++.++|+|||.+++.+...+. ......++. .....++.++|.+++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHH
Confidence 4699999999999998776 8999999999999999998765432 111111110 11234689999999999
Q ss_pred CCCcEEEEEEcC
Q 022929 244 AGFKDVQLKRIG 255 (290)
Q Consensus 244 aGf~~v~~~~~~ 255 (290)
+||+++++...+
T Consensus 312 aGf~~~~~~~~~ 323 (334)
T 2ip2_A 312 GGFAVERIVDLP 323 (334)
T ss_dssp TTEEEEEEEEET
T ss_pred CCCceeEEEECC
Confidence 999999887754
No 76
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=6e-19 Score=153.40 Aligned_cols=148 Identities=17% Similarity=0.105 Sum_probs=116.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCC-CCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPF-PTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~-~~~~~D~i~~~~~ 184 (290)
++.+|||||||+|.++..+++. +..+++|+|+|+.+++.|+++... .++.++.+|+.++++ .+++||+|++..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 7889999999999999998887 356999999999999999987433 357999999998887 5778999999999
Q ss_pred ccc----cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHh---------------------h-------------hhHH
Q 022929 185 IEY----WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---------------------R-------------YFAD 226 (290)
Q Consensus 185 l~~----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---------------------~-------------~~~~ 226 (290)
++| ..+...+++++.++|+|||.+++..+........ . ....
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 222 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNN 222 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSS
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcC
Confidence 977 3456789999999999999999987653221100 0 0000
Q ss_pred HhhcCCCHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 227 VWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 227 ~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
....+++.+++.++|+++||+++++..+...+
T Consensus 223 ~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~ 254 (298)
T 1ri5_A 223 CIEYFVDFTRMVDGFKRLGLSLVERKGFIDFY 254 (298)
T ss_dssp EEEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred CcccccCHHHHHHHHHHcCCEEEEecCHHHHH
Confidence 11235688999999999999999998876543
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.77 E-value=3.5e-19 Score=154.85 Aligned_cols=119 Identities=22% Similarity=0.199 Sum_probs=97.9
Q ss_pred ccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC----C---CCCceEEEcC
Q 022929 93 WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----P---LKECKIVEGD 165 (290)
Q Consensus 93 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~---~~~v~~~~~d 165 (290)
..+.+...+...+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++. . ..++.+..+|
T Consensus 41 ~~~~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQH-GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp BCHHHHHHHHHHHHHT-TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred hHHHHHHHHHHHhccc-CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 3445555555544432 6789999999999999999998 669999999999999998753 1 1357888999
Q ss_pred CCCCC---CCCCCccEEEec-CcccccCC-------HHHHHHHHHhccCCCCEEEEEccC
Q 022929 166 AEDLP---FPTDYADRYVSA-GSIEYWPD-------PQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 166 ~~~l~---~~~~~~D~i~~~-~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+.+++ +++++||+|++. ++++|+++ ...+++++.++|||||.+++..+.
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 88776 677889999998 89999999 889999999999999999987543
No 78
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.77 E-value=7e-18 Score=151.31 Aligned_cols=150 Identities=24% Similarity=0.245 Sum_probs=117.2
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEE
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i 179 (290)
.++..+....+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++. .+++++.+|+.+ +++.+ |+|
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~D~~~-~~p~~--D~v 263 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF---PGVTHVGGDMFK-EVPSG--DTI 263 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCCC--SEE
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc---CCeEEEeCCcCC-CCCCC--CEE
Confidence 3444443233678999999999999999999999999999999 8888877643 579999999987 76654 999
Q ss_pred EecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCch------hHh-hhhHH------HhhcCCCHHHHHHHHHHC
Q 022929 180 VSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTF------WLS-RYFAD------VWMLFPKEEEYIEWFQKA 244 (290)
Q Consensus 180 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~------~~~-~~~~~------~~~~~~~~~~~~~ll~~a 244 (290)
++.+++|++++.+ +++++++++|+|||++++.+...+.. ... ...+- .....++.++|.++|+++
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~A 343 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGA 343 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHT
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHC
Confidence 9999999997654 79999999999999999987654321 000 11111 112346899999999999
Q ss_pred CCcEEEEEEcCc
Q 022929 245 GFKDVQLKRIGP 256 (290)
Q Consensus 245 Gf~~v~~~~~~~ 256 (290)
||+.+++..+..
T Consensus 344 GF~~v~~~~~~~ 355 (364)
T 3p9c_A 344 GFTGVKSTYIYA 355 (364)
T ss_dssp TCCEEEEEEEET
T ss_pred CCceEEEEEcCC
Confidence 999999987654
No 79
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=1.2e-18 Score=145.46 Aligned_cols=145 Identities=20% Similarity=0.165 Sum_probs=111.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCCCCCCCccEEEecCc--c
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLPFPTDYADRYVSAGS--I 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~~~~~~~D~i~~~~~--l 185 (290)
++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++.. ..+++++.+|+.++++++++||+|++..+ +
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 57899999999999999999884 499999999999999987642 25789999999988877778999999999 5
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHh---------hhh-----HHH------------h------hcCCC
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS---------RYF-----ADV------------W------MLFPK 233 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---------~~~-----~~~------------~------~~~~~ 233 (290)
++.++...+++++.++|+|||.+++.++........ ... ... . .....
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 195 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVWG 195 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhhc
Confidence 555567789999999999999999986642211000 000 000 0 00111
Q ss_pred HHHHHHHHHHCCCcEEEEEEcCcc
Q 022929 234 EEEYIEWFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 234 ~~~~~~ll~~aGf~~v~~~~~~~~ 257 (290)
.++.++|+++||+.+++..++..
T Consensus 196 -~~~~~~l~~~GF~~v~~~~~~~~ 218 (227)
T 1ve3_A 196 -KTGVELLAKLYFTKEAEEKVGNY 218 (227)
T ss_dssp -HHHHHHHHTTTEEEEEEEEETTT
T ss_pred -hHHHHHHHHHhhhHHHHHHhCCc
Confidence 47899999999999999998754
No 80
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.76 E-value=3.5e-18 Score=141.85 Aligned_cols=115 Identities=23% Similarity=0.239 Sum_probs=97.8
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.++.+|||||||+|.++..++ .+++++|+|+. ++.+..+|+.++++++++||+|++..++| .
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM-G 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------STTEEESCTTSCSCCTTCEEEEEEESCCC-S
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------CceEEEeccccCCCCCCCEeEEEEehhcc-c
Confidence 367899999999999987762 68999999877 56789999998888888899999999997 4
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
.++..+++++.++|+|||.+++.+... .+.+.+++.++++++||++++....+
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~--------------~~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSS--------------RFEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGG--------------GCSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCC--------------CCCCHHHHHHHHHHCCCEEEEEecCC
Confidence 888999999999999999999986532 12378999999999999988765433
No 81
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.76 E-value=7.3e-18 Score=150.91 Aligned_cols=144 Identities=21% Similarity=0.261 Sum_probs=115.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||||||+|.++..+++..|+.+++++|+ +.+++.++++.. ..+++++.+|+.+ +++.+ ||+|++.+++
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl 259 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRK-ADAIILSFVL 259 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSC-EEEEEEESCG
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCC-ccEEEEcccc
Confidence 678999999999999999999988899999999 999999987632 2379999999976 44444 9999999999
Q ss_pred cccCCHH--HHHHHHHhccCCCCEEEEEccC-CCch---hHhhhhHH-----HhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 186 EYWPDPQ--RGIREAYRVLKLGGKACIIGPV-YPTF---WLSRYFAD-----VWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 186 ~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~-~~~~---~~~~~~~~-----~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
|++++.+ ++++++.++|+|||.+++.+.. .+.. .....+.. .....++.++|.++|+++||+++++...
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeC
Confidence 9998774 7999999999999999998876 3321 11111111 1124579999999999999999998876
Q ss_pred Cc
Q 022929 255 GP 256 (290)
Q Consensus 255 ~~ 256 (290)
+.
T Consensus 340 ~~ 341 (360)
T 1tw3_A 340 PS 341 (360)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 82
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=5.9e-17 Score=133.38 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=110.3
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPF 171 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~ 171 (290)
+.++..++..+... ++.+|||+|||+|.++..+++..|..+++++|+|+.+++.|+++.. ..+++++.+|+.+...
T Consensus 26 ~~i~~~~l~~l~~~-~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 26 QEVRAVTLSKLRLQ-DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD 104 (204)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT
T ss_pred HHHHHHHHHHcCCC-CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh
Confidence 44545555555543 7899999999999999999999777999999999999999987642 2578999999965433
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
...+||+|++..+++ +...+++++.++|+|||.+++...... +.+++.++++++|| .+++
T Consensus 105 ~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 105 DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD----------------TLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH----------------HHHHHHHHHHHTTC-EEEE
T ss_pred cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc----------------cHHHHHHHHHHCCC-ceeE
Confidence 335699999988775 778999999999999999999764321 35678899999999 5555
Q ss_pred EEc
Q 022929 252 KRI 254 (290)
Q Consensus 252 ~~~ 254 (290)
..+
T Consensus 165 ~~~ 167 (204)
T 3e05_A 165 ACV 167 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 83
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.7e-18 Score=148.97 Aligned_cols=146 Identities=20% Similarity=0.297 Sum_probs=113.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC-----CCCCceEEEcCCCCCCCCC------CCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-----PLKECKIVEGDAEDLPFPT------DYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~~~~v~~~~~d~~~l~~~~------~~~D 177 (290)
++.+|||||||+|.++..+++.+ ++.+|+|+|+|+.+++.|+++. ...+++++++|+.++++.+ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 78999999999999999999875 7899999999999999998873 2458999999999988766 7899
Q ss_pred EEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC---CCc-hhHhhhhHHHh-------hcC--CCHHHHHHHHHHC
Q 022929 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV---YPT-FWLSRYFADVW-------MLF--PKEEEYIEWFQKA 244 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~---~~~-~~~~~~~~~~~-------~~~--~~~~~~~~ll~~a 244 (290)
+|++..+++|+ ++..+++++.++|+|||.+++.+.. ... ......+.... ..+ +..+.+.+.++++
T Consensus 116 ~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~ 194 (299)
T 3g5t_A 116 MITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDS 194 (299)
T ss_dssp EEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTC
T ss_pred EEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhcc
Confidence 99999999999 9999999999999999999884322 111 11112222111 112 3556778999999
Q ss_pred CC-----cEEEEEEcCc
Q 022929 245 GF-----KDVQLKRIGP 256 (290)
Q Consensus 245 Gf-----~~v~~~~~~~ 256 (290)
|| +.++...+..
T Consensus 195 gfp~~~f~~v~~~~~~~ 211 (299)
T 3g5t_A 195 HLDPELFHDIQVSYFCA 211 (299)
T ss_dssp CCCTTTEEEEEEEEECG
T ss_pred CCChHHcCcceEEEecc
Confidence 99 4555555543
No 84
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.76 E-value=1.9e-17 Score=142.73 Aligned_cols=139 Identities=16% Similarity=0.080 Sum_probs=108.7
Q ss_pred CCCEEEEEcCcc---chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCC-----------CCCC
Q 022929 110 RNMLVVDVGGGT---GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLP-----------FPTD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~---G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~-----------~~~~ 174 (290)
...+|||||||+ |.++..+.+..|+.+|+++|+|+.+++.|+++.. ..+++++.+|+.+.+ ++..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 9988777777788999999999999999998753 357999999997531 2224
Q ss_pred CccEEEecCcccccCC--HHHHHHHHHhccCCCCEEEEEccCCCc-hhHh---hhhHHH--hhcCCCHHHHHHHHHHCCC
Q 022929 175 YADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACIIGPVYPT-FWLS---RYFADV--WMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~-~~~~---~~~~~~--~~~~~~~~~~~~ll~~aGf 246 (290)
+||+|++..++||+++ ...+++++.++|+|||.|++.+..... .... ..+... ...+++.+++.++| .||
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~G~ 234 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--GDF 234 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--TTC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--CCC
Confidence 6999999999999987 789999999999999999998776532 1111 111111 12356999999999 599
Q ss_pred cEEE
Q 022929 247 KDVQ 250 (290)
Q Consensus 247 ~~v~ 250 (290)
++++
T Consensus 235 ~l~~ 238 (274)
T 2qe6_A 235 ELVE 238 (274)
T ss_dssp EECT
T ss_pred eEcc
Confidence 8765
No 85
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.76 E-value=1.8e-17 Score=137.51 Aligned_cols=130 Identities=19% Similarity=0.257 Sum_probs=104.1
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+++ ++++||+|++..+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 36789999999999999999988 57999999999999999988653 47999999999887 5678999999999999
Q ss_pred cCCH---HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEE
Q 022929 188 WPDP---QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 188 ~~~~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
++++ ..+++++.++|+|||.+++.++..... ..+......+.+..++.+ ++..+
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~ 183 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATC-------RRWGHVAGAETVITILTE-ALTEV 183 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH-------HHTTCSCCHHHHHHHHHH-HSEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcc-------hhhhhhhhHHHHHHHHHh-hccce
Confidence 9987 467999999999999999977643211 112223456666666665 35443
No 86
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.75 E-value=4.4e-18 Score=145.56 Aligned_cols=138 Identities=28% Similarity=0.407 Sum_probs=109.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW- 188 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~- 188 (290)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++.. . .++.+|+.++++++++||+|++..++.|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~-~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV-K--NVVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC-S--CEEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC-C--CEEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 6789999999999999999987 6799999999999999998865 2 28899999988888889999998876665
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccCCCchhHh----h-------hhHHH-----------hhcCCCHHHHHHHHHHCCC
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLS----R-------YFADV-----------WMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~----~-------~~~~~-----------~~~~~~~~~~~~ll~~aGf 246 (290)
+++..+++++.++|+|||.+++..+........ . ..... ...+++.+++.++ +||
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---aGf 205 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---EGF 205 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---TTE
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---cCc
Confidence 788999999999999999999986653211100 0 00000 0125688888877 999
Q ss_pred cEEEEEEcC
Q 022929 247 KDVQLKRIG 255 (290)
Q Consensus 247 ~~v~~~~~~ 255 (290)
+++++..+.
T Consensus 206 ~~~~~~~~~ 214 (260)
T 2avn_A 206 ETVDIRGIG 214 (260)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEECCC
Confidence 999888764
No 87
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.75 E-value=2.7e-17 Score=146.65 Aligned_cols=147 Identities=24% Similarity=0.270 Sum_probs=112.0
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~ 175 (290)
.+++..... ++.+|||||||+|.++..+++.+|+.+++++|+ +.++. +++.. ..+++++.+|+.+ +++ +
T Consensus 175 ~~~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p--~ 247 (348)
T 3lst_A 175 ILARAGDFP-ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP--H 247 (348)
T ss_dssp HHHHHSCCC-SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC--C
T ss_pred HHHHhCCcc-CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC--C
Confidence 334444433 678999999999999999999999999999999 55555 33221 2469999999963 444 6
Q ss_pred ccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCch---hHhhhhH-----HHhhcCCCHHHHHHHHHHCC
Q 022929 176 ADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTF---WLSRYFA-----DVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~ll~~aG 245 (290)
||+|++.+++|++++. .+++++++++|||||++++.+...+.. ......+ ......++.++|.++|+++|
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 327 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAG 327 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTT
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCC
Confidence 9999999999999988 589999999999999999987654321 1111111 11123468999999999999
Q ss_pred CcEEEEEE
Q 022929 246 FKDVQLKR 253 (290)
Q Consensus 246 f~~v~~~~ 253 (290)
|+++++..
T Consensus 328 f~~~~~~~ 335 (348)
T 3lst_A 328 LRLDRVVG 335 (348)
T ss_dssp EEEEEEEE
T ss_pred CceEEEEE
Confidence 99999887
No 88
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=9.5e-19 Score=144.39 Aligned_cols=143 Identities=26% Similarity=0.235 Sum_probs=110.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|..+..++.. ++.+++|+|+|+.+++.++++.. ..+++++.+|+.++++++++||+|++..+++|
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 6789999999999985444444 36799999999999999987642 24688999999998888888999999999999
Q ss_pred c--CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh-------------hhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 188 W--PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-------------YFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 188 ~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
+ .+...+++++.++|+|||.+++.+.......... .....+..+++.+++.+++.++||...+..
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 9 5667899999999999999999876543321100 000112245689999999999999766654
Q ss_pred E
Q 022929 253 R 253 (290)
Q Consensus 253 ~ 253 (290)
.
T Consensus 182 ~ 182 (209)
T 2p8j_A 182 V 182 (209)
T ss_dssp E
T ss_pred e
Confidence 3
No 89
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.74 E-value=1.2e-16 Score=134.16 Aligned_cols=141 Identities=20% Similarity=0.213 Sum_probs=105.2
Q ss_pred ccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCC----CCCCCCCc
Q 022929 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAED----LPFPTDYA 176 (290)
Q Consensus 102 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~----l~~~~~~~ 176 (290)
++.+... ++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.++++... .++.++.+|+.. .++. ++|
T Consensus 67 l~~~~~~-~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 67 LKVMPIK-RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCCC-TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccccCCC-CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccE
Confidence 5544443 78899999999999999999997668999999999999999887543 578999999987 6666 679
Q ss_pred cEEEecCcccccCCH---HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 177 DRYVSAGSIEYWPDP---QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 177 D~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
|+|+ ++++++ ..+++++.++|+|||.+++..... ........... ..+++. +|+++||++++...
T Consensus 145 D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-~~~~~~~~~~~-----~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKAR-SIDVTKDPKEI-----FKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp EEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGG-GTCSSSCHHHH-----HHHHHH-HHHHHTEEEEEEEE
T ss_pred EEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecC-CCCCCCCHHHh-----hHHHHH-HHHHCCCEEEEEEc
Confidence 9999 344555 678999999999999999862110 00000000000 236777 89999999998887
Q ss_pred cCc
Q 022929 254 IGP 256 (290)
Q Consensus 254 ~~~ 256 (290)
+.+
T Consensus 213 ~~~ 215 (230)
T 1fbn_A 213 IEP 215 (230)
T ss_dssp CTT
T ss_pred cCC
Confidence 654
No 90
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.74 E-value=1.1e-17 Score=150.45 Aligned_cols=148 Identities=22% Similarity=0.229 Sum_probs=116.0
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEE
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i 179 (290)
.++..+....++.+|||||||+|.++..+++.+|..+++++|+ +.+++.+++. .+++++.+|+.+ +++. ||+|
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~~~--~D~v 271 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL---SGIEHVGGDMFA-SVPQ--GDAM 271 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCC--EEEE
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc---CCCEEEeCCccc-CCCC--CCEE
Confidence 3444443123678999999999999999999998899999999 9999887753 469999999987 6654 9999
Q ss_pred EecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchh-------HhhhhHH-----HhhcCCCHHHHHHHHHHCC
Q 022929 180 VSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFW-------LSRYFAD-----VWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 180 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~ll~~aG 245 (290)
++.+++|++++++ .+++++.++|+|||.+++.+...+... .....+. .....++.++|.++|+++|
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 351 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSG 351 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTT
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCC
Confidence 9999999999887 899999999999999999865432110 1111111 1123468999999999999
Q ss_pred CcEEEEEEc
Q 022929 246 FKDVQLKRI 254 (290)
Q Consensus 246 f~~v~~~~~ 254 (290)
|+++++...
T Consensus 352 f~~~~~~~~ 360 (372)
T 1fp1_D 352 FSKFQVACR 360 (372)
T ss_dssp CSEEEEEEE
T ss_pred CceEEEEEc
Confidence 999988774
No 91
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=7.8e-18 Score=143.05 Aligned_cols=101 Identities=25% Similarity=0.289 Sum_probs=83.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCCCCCCCccEEEecC-ccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLPFPTDYADRYVSAG-SIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~~~~~~~D~i~~~~-~l~ 186 (290)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++.. ..+++++++|+.+++++ ++||+|++.. .++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchh
Confidence 6789999999999999999987 6799999999999999987643 23689999999887765 5699999864 444
Q ss_pred ccC--CHHHHHHHHHhccCCCCEEEEEcc
Q 022929 187 YWP--DPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 187 ~~~--~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+.+ +...+++++.++|+|||.+++..+
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 443 346899999999999999987643
No 92
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=1e-17 Score=145.17 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=107.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... +++++.+|+.+++. +++||+|++..+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 6789999999999999999998 679999999999999998774322 78999999988776 667999999999999
Q ss_pred cCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 188 WPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 188 ~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
++++ ..+++++.++|+|||.+++........... .......++.+++.++++ +|+++..++.
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 260 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC---PLPFSFTFAENELKEYYK--DWEFLEYNEN 260 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---SSCCSCCBCTTHHHHHTT--TSEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC---CCCccccCCHHHHHHHhc--CCEEEEEEcc
Confidence 9654 489999999999999987765433221000 111123457788999886 4988887644
No 93
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.73 E-value=3.1e-17 Score=146.42 Aligned_cols=138 Identities=24% Similarity=0.325 Sum_probs=111.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++. .+++++.+|+.+ +++. ||+|++.+++|+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS---NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWT 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB---TTEEEEECCTTT-CCCC--CSEEEEESCGGGSC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC---CCcEEEeccccC-CCCC--ccEEEeehhhccCC
Confidence 668999999999999999999998899999999 9999888753 469999999976 5553 99999999999999
Q ss_pred CHH--HHHHHHHhccCC---CCEEEEEccCCCchh-------HhhhhHH----HhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 190 DPQ--RGIREAYRVLKL---GGKACIIGPVYPTFW-------LSRYFAD----VWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 190 ~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
+.+ ++++++.++||| ||++++.+...+... ....++. .....++.++|.++|+++||+++++..
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 887 899999999999 999999876543211 1111110 012346889999999999999998876
Q ss_pred c
Q 022929 254 I 254 (290)
Q Consensus 254 ~ 254 (290)
.
T Consensus 341 ~ 341 (352)
T 1fp2_A 341 L 341 (352)
T ss_dssp E
T ss_pred c
Confidence 4
No 94
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.73 E-value=2.2e-17 Score=138.25 Aligned_cols=135 Identities=19% Similarity=0.088 Sum_probs=108.9
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC-CCC
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA-EDL 169 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~-~~l 169 (290)
++..+.+...++.... .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ..+++++++|+ ..+
T Consensus 31 ~~~~~~l~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~d~~~~~ 104 (226)
T 3m33_A 31 GPDPELTFDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN--APHADVYEWNGKGEL 104 (226)
T ss_dssp SSCTTHHHHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH--CTTSEEEECCSCSSC
T ss_pred CCCHHHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh--CCCceEEEcchhhcc
Confidence 3445556555554432 37899999999999999999998 68999999999999999988 34799999999 567
Q ss_pred CCC-CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcE
Q 022929 170 PFP-TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKD 248 (290)
Q Consensus 170 ~~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 248 (290)
|++ +++||+|++. .++..+++++.++|||||.++.. ..+.+.+++.+.++++||+.
T Consensus 105 ~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~-----------------~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 105 PAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYV-----------------GPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp CTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEE-----------------ESSSCCTHHHHHHHHTTCEE
T ss_pred CCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEe-----------------CCcCCHHHHHHHHHHCCCeE
Confidence 777 7889999987 45667899999999999999811 11235678999999999998
Q ss_pred EEEEEc
Q 022929 249 VQLKRI 254 (290)
Q Consensus 249 v~~~~~ 254 (290)
+++...
T Consensus 162 ~~~~~~ 167 (226)
T 3m33_A 162 VAEDHV 167 (226)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 887654
No 95
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=3.5e-18 Score=149.37 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=106.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC---------CceEEEcCCC------CC--CCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK---------ECKIVEGDAE------DL--PFP 172 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------~v~~~~~d~~------~l--~~~ 172 (290)
++.+|||||||+|..+..++.. ++.+|+|+|+|+.+++.|+++.... +++|.+.|+. ++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 5789999999999877766654 3579999999999999999874321 2567788872 22 245
Q ss_pred CCCccEEEecCccccc---CCHHHHHHHHHhccCCCCEEEEEccCCCchhH----------------h------------
Q 022929 173 TDYADRYVSAGSIEYW---PDPQRGIREAYRVLKLGGKACIIGPVYPTFWL----------------S------------ 221 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~----------------~------------ 221 (290)
+++||+|+|..++||. .+...+++++.++|||||.+++.++....... .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 6789999999999875 34578999999999999999987653211000 0
Q ss_pred --hhhH-----HHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 222 --RYFA-----DVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 222 --~~~~-----~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
.+.. +....+.+.+++.++++++||++++...+..
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFAT 248 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHH
Confidence 0000 0011246789999999999999999987754
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.72 E-value=7.2e-17 Score=129.27 Aligned_cols=138 Identities=20% Similarity=0.161 Sum_probs=109.1
Q ss_pred ccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC
Q 022929 87 VINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA 166 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~ 166 (290)
++.|++.++.+.+. +.... .++.+|||+|||+|.++..+++. + +++|+|+|+.+++. ..+++++++|+
T Consensus 3 v~~P~~~~~~l~~~-l~~~~--~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~------~~~~~~~~~d~ 70 (170)
T 3q87_B 3 WYEPGEDTYTLMDA-LEREG--LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES------HRGGNLVRADL 70 (170)
T ss_dssp SCCCCHHHHHHHHH-HHHHT--CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT------CSSSCEEECST
T ss_pred ccCcCccHHHHHHH-HHhhc--CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc------ccCCeEEECCh
Confidence 44566656666555 33321 25679999999999999999998 4 99999999999987 35789999999
Q ss_pred CCCCCCCCCccEEEecCcccccCCH---------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHH
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWPDP---------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~~~---------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
.+ ++++++||+|+++..+++.++. ..+++++.+.| |||.+++...... +.+++
T Consensus 71 ~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~----------------~~~~l 132 (170)
T 3q87_B 71 LC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN----------------RPKEV 132 (170)
T ss_dssp TT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG----------------CHHHH
T ss_pred hh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC----------------CHHHH
Confidence 87 6666789999999888765544 46888888888 9999998764321 56889
Q ss_pred HHHHHHCCCcEEEEEEc
Q 022929 238 IEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 238 ~~ll~~aGf~~v~~~~~ 254 (290)
.++++++||+.+.+...
T Consensus 133 ~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 133 LARLEERGYGTRILKVR 149 (170)
T ss_dssp HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHCCCcEEEEEee
Confidence 99999999998887764
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.72 E-value=1.5e-16 Score=134.50 Aligned_cols=127 Identities=15% Similarity=0.109 Sum_probs=102.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCC---CCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFP---TDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~---~~~~D~i~~~~ 183 (290)
++.+|||||||+|..+..++...++.+|+++|+|+.+++.|+++. ...+++++++|+.++++. +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 678999999999999999998777889999999999999998763 224699999999776643 56799999876
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
+.+...+++.+.++|+|||.+++........ ..+++.+.++++||++.++..+
T Consensus 150 ----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~--------------~~~~~~~~l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 150 ----VARLSVLSELCLPLVKKNGLFVALKAASAEE--------------ELNAGKKAITTLGGELENIHSF 202 (240)
T ss_dssp ----CSCHHHHHHHHGGGEEEEEEEEEEECC-CHH--------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCCEEEEEeCCCchH--------------HHHHHHHHHHHcCCeEeEEEEE
Confidence 3678899999999999999998863221110 2356778899999998887765
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.71 E-value=1.6e-16 Score=131.78 Aligned_cols=127 Identities=22% Similarity=0.133 Sum_probs=103.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC--CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP--FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~--~~~~~~D~i~~~~~ 184 (290)
++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.|+++.. ..++.++.+|+.+++ +++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 6789999999999999999999888999999999999999987642 257999999998876 66778999999865
Q ss_pred ccccC--------CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 185 IEYWP--------DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 185 l~~~~--------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
..+.. ....+++++.++|+|||.+++.+.... ..+.+.+.++++||+.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG----------------LFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH----------------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH----------------HHHHHHHHHHHCCCeeeecc
Confidence 43322 125799999999999999998753211 12566778889999887765
No 99
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=3.1e-16 Score=131.14 Aligned_cols=143 Identities=11% Similarity=0.057 Sum_probs=106.7
Q ss_pred ccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCC---CCCCCCccE
Q 022929 104 PADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDL---PFPTDYADR 178 (290)
Q Consensus 104 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l---~~~~~~~D~ 178 (290)
.+.. ++|.+|||+|||+|.++..+++.. |..+|+|+|+++++++.++++.. ..|+..+..|.... +...+.+|+
T Consensus 72 ~l~i-kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 72 ELPV-KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCCC-CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred hcCC-CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 3444 499999999999999999999985 56899999999999999988865 35788899888553 455677999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
|++. +.+..+...++.++.+.|||||.+++............. .. ..++..+.|+++||++++...+.+
T Consensus 151 Vf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~-~~------~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 151 LYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEP-SE------VYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp EEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCC-CH------HHHHHHHHHHHTTCCEEEEEECTT
T ss_pred EEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCCh-HH------HHHHHHHHHHHCCCEEEEEEccCC
Confidence 9864 344456678999999999999999987433221100000 00 123445778899999999888755
No 100
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=5.9e-16 Score=127.64 Aligned_cols=134 Identities=14% Similarity=0.171 Sum_probs=105.2
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCC-CceEEEcCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK-ECKIVEGDAEDLPF 171 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~-~v~~~~~d~~~l~~ 171 (290)
.++..++..+... ++.+|||+|||+|.++..+++. +.+|+++|+|+++++.|+++. ... +++++.+|+.+...
T Consensus 42 ~~~~~~l~~l~~~-~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 118 (204)
T 3njr_A 42 PMRALTLAALAPR-RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA 118 (204)
T ss_dssp HHHHHHHHHHCCC-TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT
T ss_pred HHHHHHHHhcCCC-CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc
Confidence 4444455555443 7899999999999999999998 789999999999999998873 233 79999999977322
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
...+||+|++...+ +.. +++++.++|+|||.+++...... +..++.+++++.|+++.++
T Consensus 119 ~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~----------------~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 119 DLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE----------------SETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp TSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH----------------HHHHHHHHHHHHCSEEEEE
T ss_pred cCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc----------------cHHHHHHHHHhCCCcEEEE
Confidence 23469999987754 456 99999999999999998765421 3467788999999988776
Q ss_pred EE
Q 022929 252 KR 253 (290)
Q Consensus 252 ~~ 253 (290)
..
T Consensus 178 ~~ 179 (204)
T 3njr_A 178 DI 179 (204)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 101
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.70 E-value=7.6e-18 Score=139.17 Aligned_cols=152 Identities=18% Similarity=0.103 Sum_probs=102.0
Q ss_pred hcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEE
Q 022929 85 DHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIV 162 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~ 162 (290)
..++.|++.++.+...+++.+....++.+|||+|||+|.++..+++..++.+++|+|+|+.+++.++++.... +++++
T Consensus 5 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 84 (215)
T 4dzr_A 5 PDCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWA 84 (215)
T ss_dssp GGGGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CC
T ss_pred CCccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEE
Confidence 4566777778888888887765434789999999999999999999988889999999999999999886543 57778
Q ss_pred EcCCCCCCCCC-----CCccEEEecCcccccCCH--------------------------HHHHHHHHhccCCCCEEEEE
Q 022929 163 EGDAEDLPFPT-----DYADRYVSAGSIEYWPDP--------------------------QRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 163 ~~d~~~l~~~~-----~~~D~i~~~~~l~~~~~~--------------------------~~~l~~~~~~L~pgG~l~i~ 211 (290)
++|+.+ ++++ ++||+|+++...++..+. ..+++++.++|+|||.+++.
T Consensus 85 ~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 85 AADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred EcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 888866 4444 779999996444322211 67888999999999994444
Q ss_pred ccCCCchhHhhhhHHHhhcCCCHHHHHHHHH--HCCCcEEEEEE
Q 022929 212 GPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ--KAGFKDVQLKR 253 (290)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~aGf~~v~~~~ 253 (290)
.... ...+++.++++ ++||..+++..
T Consensus 164 ~~~~----------------~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 164 EVGH----------------NQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp ECTT----------------SCHHHHHHHTGGGGGGTEECCEEE
T ss_pred EECC----------------ccHHHHHHHHHHhhcCCceEEEEE
Confidence 3321 14678888999 99997766554
No 102
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.70 E-value=7.9e-17 Score=129.35 Aligned_cols=136 Identities=14% Similarity=0.147 Sum_probs=104.9
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---C-CceEEEcCCCC-CC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---K-ECKIVEGDAED-LP 170 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~-~v~~~~~d~~~-l~ 170 (290)
.++..++..+.. .++.+|||+|||+|.++..+++..++.+++++|+|+.+++.|+++... . ++ ++..|..+ ++
T Consensus 12 ~~~~~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~ 89 (178)
T 3hm2_A 12 HVRALAISALAP-KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD 89 (178)
T ss_dssp HHHHHHHHHHCC-CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG
T ss_pred HHHHHHHHHhcc-cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh
Confidence 344455555544 377899999999999999999998889999999999999999977322 2 56 78888743 33
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
...++||+|++..++++ ..+++++.++|+|||.+++.+.... +...+..++++.|+++.+
T Consensus 90 ~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE----------------SEQMLWALRKQFGGTISS 149 (178)
T ss_dssp GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH----------------HHHHHHHHHHHHCCEEEE
T ss_pred ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc----------------cHHHHHHHHHHcCCeeEE
Confidence 33267999999999887 5689999999999999998765432 245677888999988776
Q ss_pred EEE
Q 022929 251 LKR 253 (290)
Q Consensus 251 ~~~ 253 (290)
+..
T Consensus 150 ~~~ 152 (178)
T 3hm2_A 150 FAI 152 (178)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 103
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=2.6e-18 Score=145.03 Aligned_cols=154 Identities=16% Similarity=0.172 Sum_probs=104.6
Q ss_pred ccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCC-
Q 022929 93 WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDL- 169 (290)
Q Consensus 93 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l- 169 (290)
|...+...+.+... .++.+|||||||+|..+..+++.. ..+++++|+|+.+++.|+++... .++.++.+|..++
T Consensus 45 we~~~m~~~a~~~~--~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~ 121 (236)
T 3orh_A 45 WETPYMHALAAAAS--SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp GGHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHHHHhhc--cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc
Confidence 44444433333332 378999999999999999998875 46899999999999999987543 3477788887543
Q ss_pred -CCCCCCccEEEe-----cCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHH
Q 022929 170 -PFPTDYADRYVS-----AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243 (290)
Q Consensus 170 -~~~~~~~D~i~~-----~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 243 (290)
++++++||.|+. ...++|.++...+++++.++|||||++.+.+................. ...+.+...|.+
T Consensus 122 ~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~e 199 (236)
T 3orh_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITI--MFEETQVPALLE 199 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHH--HHHHHTHHHHHH
T ss_pred ccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhh--hhHHHHHHHHHH
Confidence 467788999975 455667778889999999999999999875321100000000000000 013456677889
Q ss_pred CCCcEEEE
Q 022929 244 AGFKDVQL 251 (290)
Q Consensus 244 aGf~~v~~ 251 (290)
+||+++.+
T Consensus 200 aGF~~~~i 207 (236)
T 3orh_A 200 AGFRRENI 207 (236)
T ss_dssp HTCCGGGE
T ss_pred cCCeEEEE
Confidence 99986544
No 104
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.70 E-value=3.9e-16 Score=129.62 Aligned_cols=127 Identities=19% Similarity=0.141 Sum_probs=100.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCC--CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLP--FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~--~~~~~~D~i~~~~~ 184 (290)
++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.|+++. ...+++++.+|+.+++ +++++||.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 578999999999999999999988899999999999999998763 2357999999998765 66778999987654
Q ss_pred ccccCC--------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 185 IEYWPD--------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 185 l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
..+... ...+++++.++|+|||.+++.+.... ..+.+.+.++++||....+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~----------------~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG----------------LFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH----------------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCcccccc
Confidence 332221 25789999999999999998753211 12455677888899876654
No 105
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.69 E-value=7e-17 Score=135.24 Aligned_cols=149 Identities=14% Similarity=0.132 Sum_probs=99.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCC-HHHHHHH---hhhC---CCCCceEEEcCCCCCCCC-CCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQS-PHQLAKA---KQKE---PLKECKIVEGDAEDLPFP-TDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s-~~~~~~a---~~~~---~~~~v~~~~~d~~~l~~~-~~~~D~i~~ 181 (290)
++.+|||||||+|.++..+++..++.+|+|+|+| +.+++.| +++. ...++.+..+|+.++|.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999987778999999999 6676666 6543 234789999999887531 133455544
Q ss_pred cCcccc-----cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCC-----HHHHHHHHHHCCCcEEEE
Q 022929 182 AGSIEY-----WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPK-----EEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 182 ~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~aGf~~v~~ 251 (290)
.....+ ..+...+++++.++|||||.+++................ ....++ .+++.++++++||++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKR-GLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC---------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhc-CCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 332211 123356899999999999999984433322110000000 001112 234899999999999999
Q ss_pred EEcCcccc
Q 022929 252 KRIGPKWY 259 (290)
Q Consensus 252 ~~~~~~~~ 259 (290)
+.++.++.
T Consensus 183 ~~~~~~~~ 190 (225)
T 3p2e_A 183 KELDNEYV 190 (225)
T ss_dssp EEECHHHH
T ss_pred eecCHHHH
Confidence 99886654
No 106
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.69 E-value=2.1e-16 Score=141.41 Aligned_cols=139 Identities=24% Similarity=0.276 Sum_probs=111.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ +||+|++.+++|+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---NENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---CSSEEEEECCTTT-CCC--CCSEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---CCCcEEEeCccCC-CCC--CceEEEEcccccCCC
Confidence 568999999999999999999999899999999 788877765 2469999999987 665 399999999999999
Q ss_pred CHH--HHHHHHHhccCC---CCEEEEEccCCCch-------hHhhhhHH-----HhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 190 DPQ--RGIREAYRVLKL---GGKACIIGPVYPTF-------WLSRYFAD-----VWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 190 ~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~-------~~~~~~~~-----~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
+.+ ++++++.++|+| ||++++.+...+.. .....++- .....++.++|.++|+++||+++++.
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 877 999999999999 99999987653321 11111110 11234689999999999999999887
Q ss_pred EcC
Q 022929 253 RIG 255 (290)
Q Consensus 253 ~~~ 255 (290)
..+
T Consensus 346 ~~~ 348 (358)
T 1zg3_A 346 PIS 348 (358)
T ss_dssp EET
T ss_pred ecC
Confidence 743
No 107
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.69 E-value=3.1e-17 Score=136.44 Aligned_cols=146 Identities=18% Similarity=0.133 Sum_probs=105.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHH----hhh---CCCCCceEEEcCCCCCCCCCCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA----KQK---EPLKECKIVEGDAEDLPFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a----~~~---~~~~~v~~~~~d~~~l~~~~~~~D~i~~~ 182 (290)
++.+|||||||+|.++..+++..|+.+|+|+|+|+.+++.+ +++ ....+++++++|+.++++.++. |.|+..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 77899999999999999999998889999999999977753 322 2234799999999999887665 776632
Q ss_pred C---cc--cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCC----CHHHHHHHHHHCCCcEEEEEE
Q 022929 183 G---SI--EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFP----KEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 183 ~---~l--~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~aGf~~v~~~~ 253 (290)
. .+ +|++++..+++++.++|||||.+++............... ..... ..+.+.++++++||++.+++.
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVG--EHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGT--TCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccc--cCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 2 22 2667778999999999999999998532211100000000 00011 134588899999999999988
Q ss_pred cCccc
Q 022929 254 IGPKW 258 (290)
Q Consensus 254 ~~~~~ 258 (290)
+....
T Consensus 184 ~~~~~ 188 (218)
T 3mq2_A 184 LEPEE 188 (218)
T ss_dssp ECHHH
T ss_pred cchhh
Confidence 76543
No 108
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=2.1e-17 Score=139.28 Aligned_cols=150 Identities=17% Similarity=0.182 Sum_probs=102.5
Q ss_pred ccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCC-
Q 022929 93 WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDL- 169 (290)
Q Consensus 93 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l- 169 (290)
|...+...+..... .++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|+++... .+++++.+|+.++
T Consensus 45 ~~~~~~~~l~~~~~--~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 45 WETPYMHALAAAAS--SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp GGHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHHHhhcC--CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh
Confidence 44444444333322 367899999999999999997752 45899999999999999987532 4688999999877
Q ss_pred -CCCCCCccEEEe-cCcccccC-----CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHH
Q 022929 170 -PFPTDYADRYVS-AGSIEYWP-----DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242 (290)
Q Consensus 170 -~~~~~~~D~i~~-~~~l~~~~-----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 242 (290)
++++++||+|++ .+.+ +.+ +.+.+++++.++|||||.+++.+................. ...+.....|.
T Consensus 122 ~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 198 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITI--MFEETQVPALL 198 (236)
T ss_dssp GGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHH--HHHHHTHHHHH
T ss_pred cccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhh--hccHHHHHHHH
Confidence 788889999999 5554 222 2346799999999999999887543110000000000000 01245567889
Q ss_pred HCCCcE
Q 022929 243 KAGFKD 248 (290)
Q Consensus 243 ~aGf~~ 248 (290)
++||+.
T Consensus 199 ~aGF~~ 204 (236)
T 1zx0_A 199 EAGFRR 204 (236)
T ss_dssp HTTCCG
T ss_pred HCCCCC
Confidence 999984
No 109
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.69 E-value=1.8e-16 Score=132.80 Aligned_cols=129 Identities=19% Similarity=0.157 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCC-CCCCCCccEEEecCc
Q 022929 109 NRNMLVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDL-PFPTDYADRYVSAGS 184 (290)
Q Consensus 109 ~~~~~vLDiG~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l-~~~~~~~D~i~~~~~ 184 (290)
.++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|+++.... +++++.+|+..+ ++++++||+|+++..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 378999999999 999999999885 689999999999999999874322 689999997433 355678999999866
Q ss_pred ccccCC-------------------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCC
Q 022929 185 IEYWPD-------------------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 185 l~~~~~-------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 245 (290)
.++.++ ...+++++.++|+|||.+++..+.... ..+++.+++++.|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---------------~~~~~~~~l~~~g 197 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK---------------LLNVIKERGIKLG 197 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH---------------HHHHHHHHHHHTT
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh---------------HHHHHHHHHHHcC
Confidence 554332 367999999999999999987543211 3578889999999
Q ss_pred CcEEEEEE
Q 022929 246 FKDVQLKR 253 (290)
Q Consensus 246 f~~v~~~~ 253 (290)
|++..+..
T Consensus 198 ~~~~~~~~ 205 (230)
T 3evz_A 198 YSVKDIKF 205 (230)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEe
Confidence 97666543
No 110
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.69 E-value=2.5e-16 Score=135.86 Aligned_cols=130 Identities=18% Similarity=0.291 Sum_probs=105.6
Q ss_pred ccccCCCCCCCEEEEEcCccchhHHHHHhh-CCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCc
Q 022929 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYA 176 (290)
Q Consensus 102 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~ 176 (290)
+..+.. .++.+|||+|||+|.++..+++. .|+.+++++|+++.+++.|+++.. ..+++++.+|+.+ ++++++|
T Consensus 103 ~~~~~~-~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~f 180 (275)
T 1yb2_A 103 IMRCGL-RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMY 180 (275)
T ss_dssp ---CCC-CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCE
T ss_pred HHHcCC-CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCc
Confidence 333433 37889999999999999999987 567899999999999999998743 3478999999987 5666789
Q ss_pred cEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
|+|++ +.+++..+++++.++|+|||.+++.++... ..+++.+.++++||..+++.+.
T Consensus 181 D~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~----------------~~~~~~~~l~~~Gf~~~~~~~~ 237 (275)
T 1yb2_A 181 DAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD----------------QSEKTVLSLSASGMHHLETVEL 237 (275)
T ss_dssp EEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH----------------HHHHHHHHSGGGTEEEEEEEEE
T ss_pred cEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCeEEEEEEE
Confidence 99998 567788999999999999999999875421 2356778888999998888764
No 111
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.69 E-value=2.5e-16 Score=133.85 Aligned_cols=128 Identities=17% Similarity=0.142 Sum_probs=103.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCC---CCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFP---TDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~---~~~~D~i~~~~ 183 (290)
++.+|||||||+|..+..++...|+.+|+++|+|+.+++.|+++. ...+++++++|+++++.. +++||+|++..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 678999999999999999999988899999999999999999774 234699999999776542 46799999975
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+ .+...+++.+.++|||||.+++........ ...++.+.+++.||++.++..+.
T Consensus 160 ~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~--------------e~~~~~~~l~~~G~~~~~~~~~~ 213 (249)
T 3g89_A 160 V----APLCVLSELLLPFLEVGGAAVAMKGPRVEE--------------ELAPLPPALERLGGRLGEVLALQ 213 (249)
T ss_dssp S----CCHHHHHHHHGGGEEEEEEEEEEECSCCHH--------------HHTTHHHHHHHHTEEEEEEEEEE
T ss_pred c----CCHHHHHHHHHHHcCCCeEEEEEeCCCcHH--------------HHHHHHHHHHHcCCeEEEEEEee
Confidence 4 456789999999999999998764322111 23456778888999999888764
No 112
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.67 E-value=9.8e-16 Score=126.13 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=104.1
Q ss_pred cccHHHHHhhccccCCCC--CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCC
Q 022929 92 HWTEDMRDDALEPADLSN--RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDA 166 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~ 166 (290)
+..+.+...+++.+.... ++.+|||+|||+|.++..++...|+.+++++|+|+.+++.++++. ...+++++.+|+
T Consensus 45 ~~~~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 124 (207)
T 1jsx_A 45 DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRV 124 (207)
T ss_dssp ---CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCT
T ss_pred CHHHHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecch
Confidence 344445555555433211 478999999999999999999888899999999999999998763 233589999999
Q ss_pred CCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCC
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 246 (290)
.+.+ +.++||+|++.. ..+...+++.+.++|+|||.+++.... ...+++.++++ ||
T Consensus 125 ~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~-----------------~~~~~~~~~~~--g~ 180 (207)
T 1jsx_A 125 EEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKGQ-----------------MPEDEIALLPE--EY 180 (207)
T ss_dssp TTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEESS-----------------CCHHHHHTSCT--TE
T ss_pred hhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeCC-----------------CchHHHHHHhc--CC
Confidence 8865 456799999754 356788999999999999999887432 13456666655 99
Q ss_pred cEEEEEEc
Q 022929 247 KDVQLKRI 254 (290)
Q Consensus 247 ~~v~~~~~ 254 (290)
+++++..+
T Consensus 181 ~~~~~~~~ 188 (207)
T 1jsx_A 181 QVESVVKL 188 (207)
T ss_dssp EEEEEEEE
T ss_pred ceeeeeee
Confidence 88876643
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.67 E-value=3.6e-16 Score=129.12 Aligned_cols=106 Identities=19% Similarity=0.177 Sum_probs=91.9
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.++.+|||+|||+|.++..+++..+ .+++++|+|+.+++.++++... .+++++.+|+.++++++++||+|++..++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3778999999999999999998832 3899999999999999988653 5789999999988888888999999888876
Q ss_pred cC---------------CHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 188 WP---------------DPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 188 ~~---------------~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+. +...+++++.++|+|||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 54 44689999999999999999988654
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=1.8e-15 Score=121.66 Aligned_cols=133 Identities=23% Similarity=0.306 Sum_probs=106.0
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP 170 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~ 170 (290)
.+.+...+++.+... ++.+|||+|||+|.++..+++ ++.+++++|+|+.+++.++++.. ..+++++.+|+.+ +
T Consensus 20 ~~~~~~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLN-KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp CHHHHHHHHHHHCCC-TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred HHHHHHHHHHHcCCC-CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 455555555555443 778999999999999999988 57899999999999999998742 2468999999876 5
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
+++++||+|++..+ .+...+++++.++ |||.+++..+... +..++.+.++++||++..
T Consensus 96 ~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE----------------NAAKIINEFESRGYNVDA 153 (183)
T ss_dssp GGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH----------------HHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc----------------cHHHHHHHHHHcCCeEEE
Confidence 56667999999888 6778899999998 9999999875422 246788999999997665
Q ss_pred EE
Q 022929 251 LK 252 (290)
Q Consensus 251 ~~ 252 (290)
+.
T Consensus 154 ~~ 155 (183)
T 2yxd_A 154 VN 155 (183)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 115
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.66 E-value=3.5e-16 Score=128.76 Aligned_cols=124 Identities=19% Similarity=0.159 Sum_probs=102.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
++.+|||+|||+|.++..+++. +..+++++|+|+.+++.|+++.. ..+++++.+|+.+.+ +++||+|++...++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILAE 136 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcHH
Confidence 6789999999999999998875 55799999999999999998732 234899999997643 46799999988776
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+ ...+++++.++|+|||.+++.+.... +.+++.++++++||+++++...+
T Consensus 137 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 137 I---LLDLIPQLDSHLNEDGQVIFSGIDYL----------------QLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp H---HHHHGGGSGGGEEEEEEEEEEEEEGG----------------GHHHHHHHHHHTTEEEEEEEEET
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEecCcc----------------cHHHHHHHHHHcCCceEEeeccC
Confidence 5 36789999999999999998754332 35788999999999988877643
No 116
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.66 E-value=2.4e-15 Score=124.56 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=93.4
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCC----CCCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDL----PFPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l----~~~~~~~D~i~~~~ 183 (290)
+++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+... ..++.++.+|+... ++. ++||+|++..
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 37889999999999999999998766799999999986644332211 24788888898763 444 6799999872
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHH----HHHHHCCCcEEEEEEcCc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYI----EWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ll~~aGf~~v~~~~~~~ 256 (290)
.+ ..+...+++++.++|||||.+++...... .....+.+++. +.++++ |++++.....+
T Consensus 135 -~~-~~~~~~~l~~~~r~LkpgG~l~i~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p 197 (210)
T 1nt2_A 135 -AQ-KNQIEILKANAEFFLKEKGEVVIMVKARS-----------IDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMP 197 (210)
T ss_dssp -CS-TTHHHHHHHHHHHHEEEEEEEEEEEEHHH-----------HCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTT
T ss_pred -cC-hhHHHHHHHHHHHHhCCCCEEEEEEecCC-----------ccccCCHHHHHHHHHHHHHhh-cEEeeeecCCC
Confidence 21 12233468999999999999998732210 00111334432 337888 99999888754
No 117
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.66 E-value=1.1e-15 Score=130.11 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=108.5
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhh-CCCCeEEEEeCCHHHHHHHhhhC----CCCCceEEEcCCCCCCCCC
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE----PLKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~----~~~~v~~~~~d~~~l~~~~ 173 (290)
..++..+.. .++.+|||+|||+|.++..+++. .|+.+++++|+++.+++.|+++. ...++++...|+.+.++++
T Consensus 86 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDL-APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCC-CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 344444444 37899999999999999999998 45789999999999999999874 3457999999998877777
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
++||+|++ +.+++..+++++.++|+|||.+++..+... ...++.+.++++||..+++.+
T Consensus 165 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT----------------QVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp TCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH----------------HHHHHHHHHTTTTEEEEEEEE
T ss_pred CCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCceEEEEE
Confidence 78999997 456777899999999999999999875431 135677788889999887766
Q ss_pred c
Q 022929 254 I 254 (290)
Q Consensus 254 ~ 254 (290)
.
T Consensus 224 ~ 224 (258)
T 2pwy_A 224 V 224 (258)
T ss_dssp E
T ss_pred e
Confidence 4
No 118
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=1.3e-15 Score=123.47 Aligned_cols=135 Identities=16% Similarity=0.238 Sum_probs=103.1
Q ss_pred HHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCC--ceEEEcCCCCCCCC
Q 022929 98 RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKE--CKIVEGDAEDLPFP 172 (290)
Q Consensus 98 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~--v~~~~~d~~~l~~~ 172 (290)
...+++.+... ++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++.. ..+ ++++.+|+.+ +..
T Consensus 41 ~~~l~~~~~~~-~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~ 116 (194)
T 1dus_A 41 TKILVENVVVD-KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVK 116 (194)
T ss_dssp HHHHHHHCCCC-TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCT
T ss_pred HHHHHHHcccC-CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccc
Confidence 33444444443 7789999999999999999988 7899999999999999988742 233 8999999977 444
Q ss_pred CCCccEEEecCcccc-cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 173 TDYADRYVSAGSIEY-WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+++||+|++...+++ ..+...+++++.++|+|||.+++..+.... ..++.+.+++. |..+++
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~----------------~~~~~~~l~~~-~~~~~~ 179 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG----------------AKSLAKYMKDV-FGNVET 179 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH----------------HHHHHHHHHHH-HSCCEE
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC----------------hHHHHHHHHHH-hcceEE
Confidence 667999999888776 345668999999999999999998765422 23466677766 544444
Q ss_pred EE
Q 022929 252 KR 253 (290)
Q Consensus 252 ~~ 253 (290)
..
T Consensus 180 ~~ 181 (194)
T 1dus_A 180 VT 181 (194)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 119
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=7.1e-16 Score=132.46 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=84.7
Q ss_pred CCCEEEEEcCccch----hHHHHHhhCC----CCeEEEEeCCHHHHHHHhhhC---------------------C---C-
Q 022929 110 RNMLVVDVGGGTGF----TTLGIVKHVD----AKNVTILDQSPHQLAKAKQKE---------------------P---L- 156 (290)
Q Consensus 110 ~~~~vLDiG~G~G~----~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~---------------------~---~- 156 (290)
++.+|+|+|||+|. ++..+++..+ +.+|+|+|+|+.+++.|+++. . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 6666766644 469999999999999999763 0 0
Q ss_pred ---------CCceEEEcCCCCCCCC-CCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEE
Q 022929 157 ---------KECKIVEGDAEDLPFP-TDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 157 ---------~~v~~~~~d~~~l~~~-~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 211 (290)
.++.|.+.|+.+.+++ .++||+|+|.++++|+++. .++++++.+.|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2588999999886554 4679999999999999766 68999999999999999884
No 120
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.65 E-value=5e-16 Score=136.31 Aligned_cols=145 Identities=19% Similarity=0.136 Sum_probs=110.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----------CCCceEEEcCCCCCC----CC--C
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----------LKECKIVEGDAEDLP----FP--T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------~~~v~~~~~d~~~l~----~~--~ 173 (290)
++.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++.. ..+++++++|+.+++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 6789999999999999999875 47899999999999999987642 236899999998865 43 4
Q ss_pred CCccEEEecCccccc-CC---HHHHHHHHHhccCCCCEEEEEccCCCchhHh-------hh--------hH---------
Q 022929 174 DYADRYVSAGSIEYW-PD---PQRGIREAYRVLKLGGKACIIGPVYPTFWLS-------RY--------FA--------- 225 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~-~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-------~~--------~~--------- 225 (290)
++||+|++..++||. .+ ...+++++.++|+|||.+++..+........ .. +.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 489999999999987 44 4589999999999999999986643211000 00 00
Q ss_pred -----------HHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 226 -----------DVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 226 -----------~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+......+.+++.+++++.||++++...+.
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 000122467899999999999999988764
No 121
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.64 E-value=1.3e-15 Score=145.68 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=116.5
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC---------CCCCceEEEcC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---------PLKECKIVEGD 165 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~---------~~~~v~~~~~d 165 (290)
.....+++.+... ++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|+++. ...+++++++|
T Consensus 708 qRle~LLelL~~~-~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRES-SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHS-CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHHhccc-CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 3344444444332 68899999999999999999985 3479999999999999998731 23479999999
Q ss_pred CCCCCCCCCCccEEEecCcccccCCHH--HHHHHHHhccCCCCEEEEEccCCCchhHhhhh-----------------HH
Q 022929 166 AEDLPFPTDYADRYVSAGSIEYWPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFWLSRYF-----------------AD 226 (290)
Q Consensus 166 ~~~l~~~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-----------------~~ 226 (290)
+.++++.+++||+|++..+++|++++. .+++++.++|||| .+++.++..........+ ..
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh 865 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRN 865 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSC
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccc
Confidence 999998888999999999999999866 5999999999999 877777654321111110 00
Q ss_pred H-hhcCCCHHHHHH----HHHHCCCcEEEEEEcCcc
Q 022929 227 V-WMLFPKEEEYIE----WFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 227 ~-~~~~~~~~~~~~----ll~~aGf~~v~~~~~~~~ 257 (290)
. +...++.+++.. +.++.||+ ++...++..
T Consensus 866 ~DHrFEWTReEFr~Wae~LAer~GYs-VefvGVGDg 900 (950)
T 3htx_A 866 HDHKFEWTREQFNQWASKLGKRHNYS-VEFSGVGGS 900 (950)
T ss_dssp SSCSCCBCHHHHHHHHHHHHHHTTEE-EEEEEESSC
T ss_pred cCcceeecHHHHHHHHHHHHHhcCcE-EEEEccCCC
Confidence 0 011235666666 77788996 456667654
No 122
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.64 E-value=2.4e-15 Score=129.72 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=101.5
Q ss_pred CCCCEEEEEcCccchhHHHHHhh-CCCCeEEEEeCCHHHHHHHhhhCC---C-CCceEEEcCCCCCCCCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKEP---L-KECKIVEGDAEDLPFPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~---~-~~v~~~~~d~~~l~~~~~~~D~i~~~~ 183 (290)
.++.+|||+|||+|.++..+++. .|..+++++|+|+.+++.|+++.. . .+++++.+|+.+. +++++||+|++
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~-- 187 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL-- 187 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE--
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE--
Confidence 37889999999999999999998 457899999999999999998742 1 4688999998775 55667999998
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
+.+++..+++++.++|+|||.+++..+... ...++.+.|++.||..+++.+.
T Consensus 188 ---~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 188 ---DVPDPWNYIDKCWEALKGGGRFATVCPTTN----------------QVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp ---CCSCGGGTHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHSSEEEEEEECC
T ss_pred ---CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCceeEEEEE
Confidence 346777899999999999999999875321 2356777888899998877654
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=1.5e-15 Score=122.98 Aligned_cols=136 Identities=26% Similarity=0.314 Sum_probs=105.4
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---C-CCceEEEcCCC
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---L-KECKIVEGDAE 167 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~-~~v~~~~~d~~ 167 (290)
...+.++..++..+... ++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++.. . .++++..+|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPG-KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCC-TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred CChHHHHHHHHHhcCCC-CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 34455666666655543 78899999999999999999884 899999999999999987632 2 47889999886
Q ss_pred CCCCCC-CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCC
Q 022929 168 DLPFPT-DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 168 ~l~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 246 (290)
+ +++. ++||+|++..+++ +...+++++.++|+|||.+++...... +..++.+.+++.||
T Consensus 93 ~-~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 93 E-ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILLE----------------TKFEAMECLRDLGF 152 (192)
T ss_dssp H-HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBHH----------------HHHHHHHHHHHTTC
T ss_pred H-hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCcc----------------hHHHHHHHHHHCCC
Confidence 5 2222 4699999987765 457899999999999999998765321 24678899999999
Q ss_pred cEEE
Q 022929 247 KDVQ 250 (290)
Q Consensus 247 ~~v~ 250 (290)
.+..
T Consensus 153 ~~~~ 156 (192)
T 1l3i_A 153 DVNI 156 (192)
T ss_dssp CCEE
T ss_pred ceEE
Confidence 5433
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=3.3e-15 Score=127.11 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=108.7
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhh-CCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPF 171 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~ 171 (290)
....++..+.. .++.+|||+|||+|.++..+++. .|+.+++++|+|+.+++.|+++.. .++++++.+|+.+. +
T Consensus 81 ~~~~i~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 158 (255)
T 3mb5_A 81 DAALIVAYAGI-SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-I 158 (255)
T ss_dssp HHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-C
T ss_pred HHHHHHHhhCC-CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-c
Confidence 33444555544 37899999999999999999998 668999999999999999998742 23489999999763 6
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCC--CcEE
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAG--FKDV 249 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG--f~~v 249 (290)
++++||+|++ +.+++..+++++.++|+|||.+++..+... ..+++.+.+++.| |..+
T Consensus 159 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 159 EEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN----------------QVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp CCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHTGGGBSCC
T ss_pred CCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH----------------HHHHHHHHHHHcCCCcccc
Confidence 6778999997 456777899999999999999998765421 2467788999999 9888
Q ss_pred EEEEcC
Q 022929 250 QLKRIG 255 (290)
Q Consensus 250 ~~~~~~ 255 (290)
++.+..
T Consensus 218 ~~~e~~ 223 (255)
T 3mb5_A 218 RTINVL 223 (255)
T ss_dssp EEECCC
T ss_pred EEEEEe
Confidence 876654
No 125
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=2.3e-15 Score=128.64 Aligned_cols=128 Identities=19% Similarity=0.216 Sum_probs=101.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCC--CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLP--FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~--~~~~~~D~i~~~~ 183 (290)
++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|+++.. ..+++++++|+.+++ +++++||+|+++-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 578999999999999999999854 499999999999999998743 235899999997764 4567899999964
Q ss_pred ccccc--------------------CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHH
Q 022929 184 SIEYW--------------------PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243 (290)
Q Consensus 184 ~l~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 243 (290)
..... .+...+++.+.++|+|||.++++.... ...++.+.+++
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------~~~~~~~~l~~ 190 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE-----------------RLLDIIDIMRK 190 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT-----------------THHHHHHHHHH
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH-----------------HHHHHHHHHHH
Confidence 43322 113469999999999999999864321 45778899999
Q ss_pred CCCcEEEEEEcC
Q 022929 244 AGFKDVQLKRIG 255 (290)
Q Consensus 244 aGf~~v~~~~~~ 255 (290)
.||....+..+.
T Consensus 191 ~~~~~~~~~~v~ 202 (259)
T 3lpm_A 191 YRLEPKRIQFVH 202 (259)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCceEEEEEee
Confidence 999988877653
No 126
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=5.2e-15 Score=126.52 Aligned_cols=128 Identities=18% Similarity=0.242 Sum_probs=100.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---C----CceEEEcCCCCC-------CCCCCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---K----ECKIVEGDAEDL-------PFPTDY 175 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~----~v~~~~~d~~~l-------~~~~~~ 175 (290)
++.+|||+|||+|.++..+++..++.+++++|+++.+++.|+++... . +++++++|+.+. ++++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 67899999999999999999998888999999999999999998765 2 488999999876 255678
Q ss_pred ccEEEecCccccc------------------CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHH
Q 022929 176 ADRYVSAGSIEYW------------------PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEY 237 (290)
Q Consensus 176 ~D~i~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
||+|+++-..... .....+++.+.++|+|||.++++.... ...++
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------~~~~~ 178 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ-----------------SVAEI 178 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG-----------------GHHHH
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH-----------------HHHHH
Confidence 9999997332211 235689999999999999998864321 23567
Q ss_pred HHHHHHCCCcEEEEEEcC
Q 022929 238 IEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 238 ~~ll~~aGf~~v~~~~~~ 255 (290)
.+.+++. |...++..+.
T Consensus 179 ~~~l~~~-~~~~~i~~v~ 195 (260)
T 2ozv_A 179 IAACGSR-FGGLEITLIH 195 (260)
T ss_dssp HHHHTTT-EEEEEEEEEE
T ss_pred HHHHHhc-CCceEEEEEc
Confidence 7777764 8777666543
No 127
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.63 E-value=4.7e-16 Score=124.97 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=96.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC---CCCCccEEEecCcc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF---PTDYADRYVSAGSI 185 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~---~~~~~D~i~~~~~l 185 (290)
.++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.++++ ++++||+|++..++
T Consensus 11 ~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~-~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN-EGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT-TSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc-CcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 3789999999986 2399999999999988643 58999999988876 77889999999999
Q ss_pred ccc-CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 186 EYW-PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 186 ~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
+|+ ++...+++++.++|||||.+++..+...... . ....++.+++.++|+++|| +. +...
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~------~-~~~~~~~~~~~~~l~~aGf-i~-~~~~ 134 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD------N-NSKVKTASKLCSALTLSGL-VE-VKEL 134 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC------S-SSSSCCHHHHHHHHHHTTC-EE-EEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc------c-ccccCCHHHHHHHHHHCCC-cE-eecC
Confidence 999 8999999999999999999999654321100 0 1123478999999999999 44 5443
No 128
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.63 E-value=2.2e-15 Score=126.57 Aligned_cols=144 Identities=16% Similarity=0.088 Sum_probs=98.3
Q ss_pred ccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCC---CCCCCCCc
Q 022929 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAED---LPFPTDYA 176 (290)
Q Consensus 102 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~---l~~~~~~~ 176 (290)
++.+.. .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.+.++... .+++++.+|+.+ +++.+++|
T Consensus 70 l~~~~~-~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 70 VDQIHI-KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CSCCCC-CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCE
T ss_pred HheecC-CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcE
Confidence 334433 378899999999999999999986 458999999998765555443221 579999999977 34456689
Q ss_pred cEEEecCcccccCCH-HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 177 DRYVSAGSIEYWPDP-QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 177 D~i~~~~~l~~~~~~-~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
|+|++... .++. ..++.++.++|||||.+++..... ........... +. .+ .++|+++||++++...+.
T Consensus 149 D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~-~~~~~~~~~~~----~~-~~-~~~l~~~Gf~~~~~~~~~ 218 (233)
T 2ipx_A 149 DVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKAN-CIDSTASAEAV----FA-SE-VKKMQQENMKPQEQLTLE 218 (233)
T ss_dssp EEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHH-HHCSSSCHHHH----HH-HH-HHTTGGGTEEEEEEEECT
T ss_pred EEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEccc-ccccCCCHHHH----HH-HH-HHHHHHCCCceEEEEecC
Confidence 99998544 2222 456889999999999999953221 00000000000 01 23 588999999998877664
Q ss_pred c
Q 022929 256 P 256 (290)
Q Consensus 256 ~ 256 (290)
+
T Consensus 219 ~ 219 (233)
T 2ipx_A 219 P 219 (233)
T ss_dssp T
T ss_pred C
Confidence 3
No 129
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=4.4e-16 Score=126.05 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=94.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC-CCCCCccEEEecC-c
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP-FPTDYADRYVSAG-S 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~-~~~~~~D~i~~~~-~ 184 (290)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..+++++..|...++ +.+++||+|+++. .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 7899999999999999999988 7899999999999999988743 257899987776643 3466799998863 2
Q ss_pred ccc-------c-CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 185 IEY-------W-PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 185 l~~-------~-~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+++ . .+....++++.++|||||.+++............. ....++.+.+...+|.+.....+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEK--------DAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHH--------HHHHHHHHHSCTTTEEEEEEEESS
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHH--------HHHHHHHHhCCCceEEEEEehhhc
Confidence 221 1 22346889999999999999987653221100000 012445555556678877776543
No 130
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=1.9e-15 Score=128.79 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=85.2
Q ss_pred HHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC--CCCCCCC
Q 022929 98 RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED--LPFPTDY 175 (290)
Q Consensus 98 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~--l~~~~~~ 175 (290)
...+++.+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.....+.....++.. ....+++
T Consensus 34 ~~~il~~l~l~-~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 34 RENDIFLENIV-PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHHTTTCC-TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHHhcCCC-CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCC
Confidence 34445555543 7899999999999999999987 68999999999999999998764433322223221 0112457
Q ss_pred ccEEEecCcccccCC--HHHHHHHHHhccCCCCEEEEEcc
Q 022929 176 ADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
||+|++..+++|+.. ....++++.++| |||.+++...
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 999999999998864 356999999999 9999998754
No 131
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.62 E-value=1.4e-15 Score=133.05 Aligned_cols=134 Identities=19% Similarity=0.257 Sum_probs=102.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-------CCCCceEEEcCCCCCCC--CCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------PLKECKIVEGDAEDLPF--PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~v~~~~~d~~~l~~--~~~~~D~i~ 180 (290)
++.+|||||||+|.++..+++..+..+++++|+|+.+++.|+++. ...+++++.+|+.+... .+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 568999999999999999998866789999999999999999876 23579999999866432 356799999
Q ss_pred ecCcccccCCH----HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 181 SAGSIEYWPDP----QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 181 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
+.....+.+.. .++++++.++|+|||.+++....... . ....+++.+.++++||..++.....
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~---------~~~~~~~~~~l~~~GF~~v~~~~~~ 241 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL---D---------LELIEKMSRFIRETGFASVQYALMH 241 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT---C---------HHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc---c---------hHHHHHHHHHHHhCCCCcEEEEEee
Confidence 97665544332 57999999999999999987543200 0 0135678899999999988877654
No 132
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.62 E-value=6.1e-15 Score=127.17 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=104.9
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC----C--CCCceEEEcCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE----P--LKECKIVEGDAEDL 169 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----~--~~~v~~~~~d~~~l 169 (290)
....++..+.. .++.+|||+|||+|.++..+++.. ++.+++++|+++.+++.|+++. . ..++++..+|+.+.
T Consensus 87 ~~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 87 DAAQIVHEGDI-FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHHcCC-CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 33444554444 378899999999999999999863 5689999999999999998874 2 35799999999887
Q ss_pred CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHH-CCCcE
Q 022929 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK-AGFKD 248 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-aGf~~ 248 (290)
++++++||+|++ +.+++..+++++.++|+|||.+++..+... ...++.+.+++ .||..
T Consensus 166 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------~~~~~~~~l~~~~~f~~ 224 (280)
T 1i9g_A 166 ELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATVT----------------QLSRIVEALRAKQCWTE 224 (280)
T ss_dssp CCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHHSSBCC
T ss_pred CCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------HHHHHHHHHHhcCCcCC
Confidence 777778999998 445777899999999999999999875431 12344555665 78876
Q ss_pred EEEEEc
Q 022929 249 VQLKRI 254 (290)
Q Consensus 249 v~~~~~ 254 (290)
+++.+.
T Consensus 225 ~~~~~~ 230 (280)
T 1i9g_A 225 PRAWET 230 (280)
T ss_dssp CEEECC
T ss_pred cEEEEE
Confidence 666543
No 133
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.61 E-value=2.9e-14 Score=119.40 Aligned_cols=139 Identities=14% Similarity=0.072 Sum_probs=94.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC-CCCCceEEEcCCCCCC---CCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-PLKECKIVEGDAEDLP---FPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-~~~~v~~~~~d~~~l~---~~~~~~D~i~~~~ 183 (290)
+++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++...+.. ...|+.++.+|+.... ...++||+|++..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 489999999999999999999874 3679999999998754322111 1258999999987532 1235799999875
Q ss_pred cccccCCHHHH-HHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcc
Q 022929 184 SIEYWPDPQRG-IREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 184 ~l~~~~~~~~~-l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 257 (290)
.. ++...+ ...+.++|||||.+++....... +.........++..+.|+++||++++...+.+.
T Consensus 155 a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~-------d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~ 219 (232)
T 3id6_C 155 AQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSI-------DVTKDPKEIYKTEVEKLENSNFETIQIINLDPY 219 (232)
T ss_dssp CC---TTHHHHHHHHHHHHEEEEEEEEEEEC--------------CCSSSSTTHHHHHHHHTTEEEEEEEECTTT
T ss_pred CC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCc-------ccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 43 444444 45666699999999987322110 000000112245667888999999999888654
No 134
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=2.7e-15 Score=134.91 Aligned_cols=136 Identities=15% Similarity=0.201 Sum_probs=102.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++.... +++++.+|+.+.+.++++||+|+++..+++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 6789999999999999999998 679999999999999999875422 488999999887766678999999988887
Q ss_pred -----cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 188 -----WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 188 -----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
..+...+++++.++|+|||.++++......+ ...+...+. ++..+ ++.||++.+..+.++
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~--~~~l~~~f~------~v~~l-~~~gF~Vl~a~~~~~ 375 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY--EPLLEEKFG------AFQTL-KVAEYKVLFAEKRGR 375 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH--HHHHHHHHS------CCEEE-EESSSEEEEEECC--
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh--HHHHHHhhc------cEEEE-eCCCEEEEEEEEecc
Confidence 3445689999999999999999986544321 111111111 11123 667887777766544
No 135
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=3e-15 Score=126.14 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=84.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh---------CCCCCceEEEcCCCC-CC--CCCCCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---------EPLKECKIVEGDAED-LP--FPTDYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~---------~~~~~v~~~~~d~~~-l~--~~~~~~D 177 (290)
++.+|||||||+|.++..+++..|+..++|+|+|+.+++.|+++ ....++.++.+|+.+ ++ +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 56799999999999999999998889999999999999988754 224579999999986 55 6778899
Q ss_pred EEEecCcccccCC--------HHHHHHHHHhccCCCCEEEEEcc
Q 022929 178 RYVSAGSIEYWPD--------PQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 178 ~i~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.|++...-.+... ...+++++.++|+|||.+++.+.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9987544322211 13699999999999999998764
No 136
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.61 E-value=1.3e-15 Score=130.69 Aligned_cols=133 Identities=19% Similarity=0.178 Sum_probs=102.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||||||+|.++..+++..++.+++|+|+|+.+++.|+++. .++.+...|+.++++++++||+|++..+..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~--- 159 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY--PQVTFCVASSHRLPFSDTSMDAIIRIYAPC--- 159 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--TTSEEEECCTTSCSBCTTCEEEEEEESCCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcchhhCCCCCCceeEEEEeCChh---
Confidence 678999999999999999999877789999999999999999886 468899999998888888899999876633
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
.++++.++|+|||.+++.++......... ...+........ ..+..+||++++.+.+.
T Consensus 160 ----~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~gf~~~~~~~~~ 217 (269)
T 1p91_A 160 ----KAEELARVVKPGGWVITATPGPRHLMELK--GLIYNEVHLHAP--HAEQLEGFTLQQSAELC 217 (269)
T ss_dssp ----CHHHHHHHEEEEEEEEEEEECTTTTHHHH--TTTCSSCCCCCC--CCCCCTTEEEEEEEEEE
T ss_pred ----hHHHHHHhcCCCcEEEEEEcCHHHHHHHH--HHhhcccccccc--hhhHhcCCcEEEEEEEE
Confidence 57899999999999999987765432211 111111100000 24456799988877664
No 137
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.61 E-value=9.9e-17 Score=136.58 Aligned_cols=178 Identities=10% Similarity=-0.030 Sum_probs=113.0
Q ss_pred HHHhHHhHhhhcccCCC----cccHHHHHhhccccCCC-CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHH
Q 022929 75 WFYRFLSIVYDHVINPG----HWTEDMRDDALEPADLS-NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK 149 (290)
Q Consensus 75 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~ 149 (290)
.|++....+....+.|+ +.+..+...++...... .++.+|||+|||+|.++..++...++.+++|+|+|+.+++.
T Consensus 25 ~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~ 104 (254)
T 2h00_A 25 EDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNY 104 (254)
T ss_dssp HHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHH
T ss_pred HcCCeeeecCccccCCCccchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 34444444445555554 34455555555544321 25789999999999999999888667899999999999999
Q ss_pred HhhhCC----CCCceEEEcCCCCC---CCC---CCCccEEEecCcccccC---------------CHHHHHHHHHhccCC
Q 022929 150 AKQKEP----LKECKIVEGDAEDL---PFP---TDYADRYVSAGSIEYWP---------------DPQRGIREAYRVLKL 204 (290)
Q Consensus 150 a~~~~~----~~~v~~~~~d~~~l---~~~---~~~~D~i~~~~~l~~~~---------------~~~~~l~~~~~~L~p 204 (290)
|+++.. .++++++++|+.+. +++ +++||+|+++...++.. ....++.++.++|||
T Consensus 105 a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp 184 (254)
T 2h00_A 105 AKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE 184 (254)
T ss_dssp HHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHH
T ss_pred HHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec
Confidence 998742 23489999997652 344 25799999985544332 012456788899999
Q ss_pred CCEEEEEccCCCchhHhhhhHHH------hhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 205 GGKACIIGPVYPTFWLSRYFADV------WMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 205 gG~l~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
||.+.+....... ........ .....+.+++.++|+++||+.+++..+
T Consensus 185 gG~l~~~~~~~~~--~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 185 GGELEFVKRIIHD--SLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp HTHHHHHHHHHHH--HHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEEEHHHHHH--HHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 9988765431110 00000000 011234578999999999998887765
No 138
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.61 E-value=5.9e-16 Score=134.06 Aligned_cols=143 Identities=20% Similarity=0.175 Sum_probs=112.5
Q ss_pred hHhhhhHHHHHHHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCH
Q 022929 65 RFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP 144 (290)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~ 144 (290)
.+.++..+...||+....+....+.|++.++.+.+.+++.+... ++.+|||+|||+|.++..+++. ++.+|+|+|+|+
T Consensus 79 ~p~~yi~g~~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~-~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~ 156 (284)
T 1nv8_A 79 YPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKY-GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSS 156 (284)
T ss_dssp CCHHHHHTEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHH-TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCH
T ss_pred CCCeEEeeeeEECCeEEEeCCCceecChhHHHHHHHHHHHhccc-CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCH
Confidence 45566666667777777777788889999999988888765432 5679999999999999999999 889999999999
Q ss_pred HHHHHHhhhCC---C-CCceEEEcCCCCCCCCCCCc---cEEEec------------CcccccCC--------HHHHHHH
Q 022929 145 HQLAKAKQKEP---L-KECKIVEGDAEDLPFPTDYA---DRYVSA------------GSIEYWPD--------PQRGIRE 197 (290)
Q Consensus 145 ~~~~~a~~~~~---~-~~v~~~~~d~~~l~~~~~~~---D~i~~~------------~~l~~~~~--------~~~~l~~ 197 (290)
.+++.|+++.. . ++++++++|+.+ +++ ++| |+|+++ .+. |.+. ...++++
T Consensus 157 ~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~ 233 (284)
T 1nv8_A 157 KAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYRE 233 (284)
T ss_dssp HHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHH
Confidence 99999998743 2 248999999976 333 468 999996 222 3322 1268999
Q ss_pred HH-hccCCCCEEEEEc
Q 022929 198 AY-RVLKLGGKACIIG 212 (290)
Q Consensus 198 ~~-~~L~pgG~l~i~~ 212 (290)
+. +.|+|||.+++..
T Consensus 234 i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 234 FFGRYDTSGKIVLMEI 249 (284)
T ss_dssp HHHHCCCTTCEEEEEC
T ss_pred HHHhcCCCCCEEEEEE
Confidence 99 9999999999864
No 139
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=6e-15 Score=127.08 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
.++.+|||||||+|.++..++...++.+|+|+|+|+++++.|+++.. ..+++++++|+.+++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 48999999999999876555455568999999999999999998732 268999999998875 567999998654
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.++..++++++.++|||||.+++.+.
T Consensus 198 --~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 --AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp --CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 57888999999999999999998763
No 140
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.61 E-value=1.2e-15 Score=136.38 Aligned_cols=120 Identities=17% Similarity=0.272 Sum_probs=96.0
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC------------CCCCceEE
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE------------PLKECKIV 162 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~v~~~ 162 (290)
......+++.+... ++.+|||||||+|.++..++...+..+++|+|+|+.+++.|+++. ...+++|+
T Consensus 159 ~~~i~~il~~l~l~-~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 159 FDLVAQMIDEIKMT-DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHCCC-TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred HHHHHHHHHhcCCC-CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 34455666666554 889999999999999999998876667999999999999887642 12579999
Q ss_pred EcCCCCCCCCC--CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 163 EGDAEDLPFPT--DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 163 ~~d~~~l~~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
++|+.++++.+ ..||+|++++.+ +.++....|.++.+.|||||.|++.+...+
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 99999887643 359999998776 456777888999999999999999865543
No 141
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.60 E-value=9.6e-16 Score=125.27 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=100.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCC-CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLP-FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~-~~~~~~D~i~~~~ 183 (290)
++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|+++... .+++++++|+.+++ +.+++||+|++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 78899999999999999999985 457999999999999999987432 47899999987765 5557899999876
Q ss_pred cccc---------cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 184 SIEY---------WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 184 ~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.+.. ..+...+++++.++|+|||.+++............. . ...++...+...+|++.....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~-~-------~~~~~~~~l~~~~~~v~~~~~~ 173 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEK-E-------KVLEFLKGVDQKKFIVQRTDFI 173 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHH-H-------HHHHHHTTSCTTTEEEEEEEET
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHH-H-------HHHHHHHhCCCCcEEEEEEEec
Confidence 5411 112357999999999999999988643221100000 0 1233444445567888777665
Q ss_pred Cc
Q 022929 255 GP 256 (290)
Q Consensus 255 ~~ 256 (290)
..
T Consensus 174 ~~ 175 (197)
T 3eey_A 174 NQ 175 (197)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 142
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=2.1e-15 Score=122.57 Aligned_cols=105 Identities=14% Similarity=0.106 Sum_probs=87.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC--CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP--FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~--~~~~~~D~i~~~~~ 184 (290)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.|+++.. ..+++++++|+.+++ +++++||+|++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 6789999999999999988775 45689999999999999998742 247899999987653 34567999999888
Q ss_pred cccc-CCHHHHHHHHHh--ccCCCCEEEEEccCC
Q 022929 185 IEYW-PDPQRGIREAYR--VLKLGGKACIIGPVY 215 (290)
Q Consensus 185 l~~~-~~~~~~l~~~~~--~L~pgG~l~i~~~~~ 215 (290)
+++. ++...+++.+.+ +|+|||.+++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7764 567789999999 999999999976543
No 143
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.60 E-value=4.9e-16 Score=130.63 Aligned_cols=145 Identities=21% Similarity=0.129 Sum_probs=94.0
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC------CCceEEE-cCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------KECKIVE-GDAEDLPFP 172 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~v~~~~-~d~~~l~~~ 172 (290)
.+++.+....++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++... .++.+.. .|+..
T Consensus 27 ~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~---- 101 (232)
T 3opn_A 27 KALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ---- 101 (232)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS----
T ss_pred HHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc----
Confidence 34444444446789999999999999999988 336999999999999998775431 1222222 22221
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh-hh------HHHhhcCCCHHHHHHHHHHCC
Q 022929 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR-YF------ADVWMLFPKEEEYIEWFQKAG 245 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~ll~~aG 245 (290)
..+|.+.+..++.++ ..+++++.++|||||.+++.. .+.+.... .. .+......+.+++.++++++|
T Consensus 102 -~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aG 175 (232)
T 3opn_A 102 -GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--KPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLG 175 (232)
T ss_dssp -CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--CcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCC
Confidence 124554444444433 579999999999999998863 11111000 00 011111236789999999999
Q ss_pred CcEEEEEEcC
Q 022929 246 FKDVQLKRIG 255 (290)
Q Consensus 246 f~~v~~~~~~ 255 (290)
|+++.+...+
T Consensus 176 f~v~~~~~~p 185 (232)
T 3opn_A 176 FSVKGLTFSP 185 (232)
T ss_dssp EEEEEEEECS
T ss_pred CEEEEEEEcc
Confidence 9988887654
No 144
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.59 E-value=2e-15 Score=128.67 Aligned_cols=139 Identities=19% Similarity=0.147 Sum_probs=101.2
Q ss_pred CCCEEEEEcCcc--chhHHHH-HhhCCCCeEEEEeCCHHHHHHHhhhCCC---CCceEEEcCCCCCC----CC--CCCcc
Q 022929 110 RNMLVVDVGGGT--GFTTLGI-VKHVDAKNVTILDQSPHQLAKAKQKEPL---KECKIVEGDAEDLP----FP--TDYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~--G~~~~~l-~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~v~~~~~d~~~l~----~~--~~~~D 177 (290)
...+|||||||. +..+..+ ....|+.+|+++|.|+.|++.|++++.. .+++++++|+.+++ .+ .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 346899999996 3344444 4456889999999999999999987543 35899999998742 01 23355
Q ss_pred -----EEEecCcccccCC---HHHHHHHHHhccCCCCEEEEEccCCCch-hHhhhhHHHh------hcCCCHHHHHHHHH
Q 022929 178 -----RYVSAGSIEYWPD---PQRGIREAYRVLKLGGKACIIGPVYPTF-WLSRYFADVW------MLFPKEEEYIEWFQ 242 (290)
Q Consensus 178 -----~i~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~ll~ 242 (290)
.|+++.+|||+++ +..+++++.+.|+|||+|++.+...+.. .........+ ..+++.+++..+|.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~ 237 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE 237 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC
Confidence 6889999999988 4689999999999999999987655421 1111111111 23579999999995
Q ss_pred HCCCcEEE
Q 022929 243 KAGFKDVQ 250 (290)
Q Consensus 243 ~aGf~~v~ 250 (290)
||++++
T Consensus 238 --Glelve 243 (277)
T 3giw_A 238 --GLELVE 243 (277)
T ss_dssp --TSEECT
T ss_pred --CCcccC
Confidence 998654
No 145
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.59 E-value=5.3e-14 Score=117.56 Aligned_cols=136 Identities=18% Similarity=0.067 Sum_probs=97.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCC---CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLP---FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~---~~~~~~D~i~~~~~ 184 (290)
++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.++++... .+++++.+|+.+.. ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 78899999999999999999885 357999999999999888776543 57999999997631 12347999997654
Q ss_pred ccccCCHH-HHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 185 IEYWPDPQ-RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 185 l~~~~~~~-~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
.++.. .+++++.++|+|||.+++..... ......... ....+++.++ +++ |++++...+.+
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~-----~~~~~~l~~l-~~~-f~~~~~~~~~~ 214 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIAVKSR-SIDVTKEPE-----QVFREVEREL-SEY-FEVIERLNLEP 214 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEEEEGG-GTCTTSCHH-----HHHHHHHHHH-HTT-SEEEEEEECTT
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEEEecC-CCCCCCChh-----hhhHHHHHHH-Hhh-ceeeeEeccCc
Confidence 23333 45999999999999998872211 100000000 0134567666 777 99998888754
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.59 E-value=1.4e-15 Score=129.73 Aligned_cols=124 Identities=22% Similarity=0.240 Sum_probs=99.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCC--ceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++...++ +++..+|+.+ ++++++||+|+++...++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL 196 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH
Confidence 7889999999999999998887 4499999999999999998743222 7888888865 234567999998765443
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
...+++++.++|+|||.+++.+.... +.+++.+.++++||+++++...+
T Consensus 197 ---~~~~l~~~~~~LkpgG~lils~~~~~----------------~~~~v~~~l~~~Gf~~~~~~~~~ 245 (254)
T 2nxc_A 197 ---HAALAPRYREALVPGGRALLTGILKD----------------RAPLVREAMAGAGFRPLEEAAEG 245 (254)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEEEGG----------------GHHHHHHHHHHTTCEEEEEEEET
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEeeccC----------------CHHHHHHHHHHCCCEEEEEeccC
Confidence 45799999999999999999754321 36789999999999998877643
No 147
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.59 E-value=1.8e-14 Score=124.63 Aligned_cols=147 Identities=14% Similarity=0.115 Sum_probs=105.4
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeC-CHHHHHHHhhhC-----CC--------CCc
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQ-SPHQLAKAKQKE-----PL--------KEC 159 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~-s~~~~~~a~~~~-----~~--------~~v 159 (290)
++.+.+.+...... .++.+|||+|||+|.++..+++. +..+|+++|+ |+.+++.|+++. .. .++
T Consensus 64 ~~~l~~~l~~~~~~-~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPEL-IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGG-TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchh-cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 34445554444332 26789999999999999988886 3359999999 899999999876 32 257
Q ss_pred eEEEcCCCCCC--C----CCCCccEEEecCcccccCCHHHHHHHHHhccC---C--CCEEEEEccCCCchhHhhhhHHHh
Q 022929 160 KIVEGDAEDLP--F----PTDYADRYVSAGSIEYWPDPQRGIREAYRVLK---L--GGKACIIGPVYPTFWLSRYFADVW 228 (290)
Q Consensus 160 ~~~~~d~~~l~--~----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~---p--gG~l~i~~~~~~~~~~~~~~~~~~ 228 (290)
++...|..+.. + .+++||+|++..++++.++...+++.+.++|+ | ||.+++.........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~--------- 212 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL--------- 212 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------------
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc---------
Confidence 77766654421 1 35679999999999999899999999999999 9 998877533221100
Q ss_pred hcCCCHHHHHHHHHHCC-CcEEEEEE
Q 022929 229 MLFPKEEEYIEWFQKAG-FKDVQLKR 253 (290)
Q Consensus 229 ~~~~~~~~~~~ll~~aG-f~~v~~~~ 253 (290)
.....++.+.++++| |++.++..
T Consensus 213 --~~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 213 --AERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp -----CTHHHHHHHHSTTEEEEEEEC
T ss_pred --chhHHHHHHHHHhcCCEEEEEecc
Confidence 012356777889999 99887754
No 148
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=2.5e-15 Score=125.11 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=86.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCC-C--CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDL-P--FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l-~--~~~~~~D~i~~~~ 183 (290)
++.+|||||||+|.++..+++..|+..|+|+|+|+.+++.|+++. ...|+.++.+|+.++ + +++++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 578999999999999999999988899999999999999998773 345799999998763 3 6678899999875
Q ss_pred cccccCCH--------HHHHHHHHhccCCCCEEEEEcc
Q 022929 184 SIEYWPDP--------QRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 184 ~l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
...+.... ..+++++.++|||||.+++.+.
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 54433222 2599999999999999999864
No 149
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.58 E-value=3.2e-15 Score=128.96 Aligned_cols=150 Identities=17% Similarity=0.089 Sum_probs=99.8
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEE-EcCCCCCC---CCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV-EGDAEDLP---FPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~-~~d~~~l~---~~~~~ 175 (290)
.+++.+....++.+|||||||+|.++..+++. +..+|+|+|+|+.|++.+.++. .++... ..|+..++ ++..+
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~--~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD--DRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC--TTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC--cccceecccCceecchhhCCCCC
Confidence 34444444446789999999999999999887 4569999999999998854432 122222 22332222 33445
Q ss_pred ccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEc---cCCCchhHh--hhhHHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG---PVYPTFWLS--RYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
||+|++..+++++ ..++.++.++|+|||.+++.. +-....... ....+...+....+++.++++++||.+..
T Consensus 152 fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 152 PSFASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp CSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 9999998877654 679999999999999998862 111111100 01111111223678999999999999888
Q ss_pred EEEcC
Q 022929 251 LKRIG 255 (290)
Q Consensus 251 ~~~~~ 255 (290)
+...+
T Consensus 229 ~~~sp 233 (291)
T 3hp7_A 229 LDFSP 233 (291)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 77654
No 150
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=2.1e-15 Score=135.77 Aligned_cols=134 Identities=17% Similarity=0.211 Sum_probs=99.7
Q ss_pred HHHHhHHhHhhhc--ccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHh
Q 022929 74 FWFYRFLSIVYDH--VINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 151 (290)
Q Consensus 74 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 151 (290)
..||+.++..|.. ++.+......+...++..... .++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+
T Consensus 26 ~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~-~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~ 102 (376)
T 3r0q_C 26 AQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHH-FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHAR 102 (376)
T ss_dssp --CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTT-TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHH
T ss_pred HHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhcccc-CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHH
Confidence 3455555555543 344443445555555554443 37899999999999999999988 34599999999 9999988
Q ss_pred hhCC----CCCceEEEcCCCCCCCCCCCccEEEecCccccc---CCHHHHHHHHHhccCCCCEEEEE
Q 022929 152 QKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW---PDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 152 ~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
++.. ..+++++.+|+.+++++ ++||+|++..+.+++ .....+++.+.++|+|||.+++.
T Consensus 103 ~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 103 ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 7642 24589999999988776 679999996655544 55778999999999999999764
No 151
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=2.2e-15 Score=134.26 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCc-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGS- 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~- 184 (290)
++.+|||||||+|.++..+++. +..+|+|+|+| ++++.|+++.. .++++++.+|+.++++++++||+|++..+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 7899999999999999999988 55699999999 58888887632 23489999999998888888999999765
Q ss_pred --ccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 185 --IEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 185 --l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
+.+..+...+++.+.++|||||.++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 44557788999999999999999864
No 152
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.57 E-value=7.6e-16 Score=123.52 Aligned_cols=139 Identities=10% Similarity=-0.059 Sum_probs=98.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCc--eEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC--KIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v--~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
+..+|||+|||+|.++..++...|+.+|+++|+|+.+++.+++++...++ .+...|.... .+.++||+|++..++|+
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHh
Confidence 67899999999999999999998899999999999999999988543221 2334666443 34567999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
+++.+..+.++.+.|+|||.++-.. ...-......+.. .-...|++.+.+ .+.+++..+++.
T Consensus 128 L~~~~~al~~v~~~L~pggvfISfp-tksl~Gr~~gm~~-----~Y~~~~~~~~~~-~~~~~~~~~~~n 189 (200)
T 3fzg_A 128 LKQQDVNILDFLQLFHTQNFVISFP-IKSLSGKEKGMEE-----NYQLWFESFTKG-WIKILDSKVIGN 189 (200)
T ss_dssp HHHTTCCHHHHHHTCEEEEEEEEEE-CCCCC--CTTCCC-----CHHHHHHHHTTT-TSCEEEEEEETT
T ss_pred hhhhHHHHHHHHHHhCCCCEEEEeC-hHHhcCCCcchhh-----hHHHHHHHhccC-cceeeeeeeeCc
Confidence 9666667779999999999886554 1110000001111 113567777744 555676666654
No 153
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.57 E-value=3.6e-15 Score=132.45 Aligned_cols=110 Identities=24% Similarity=0.285 Sum_probs=88.6
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFP 172 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~ 172 (290)
+...+...... .++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++.. ..+++++.+|+.+++++
T Consensus 52 ~~~~i~~~~~~-~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (340)
T 2fyt_A 52 YRDFIYQNPHI-FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP 128 (340)
T ss_dssp HHHHHHHCGGG-TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS
T ss_pred HHHHHHhhhhh-cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC
Confidence 33444444333 37889999999999999999887 446999999996 8888887632 25789999999998888
Q ss_pred CCCccEEEecC---cccccCCHHHHHHHHHhccCCCCEEE
Q 022929 173 TDYADRYVSAG---SIEYWPDPQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 173 ~~~~D~i~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~ 209 (290)
+++||+|++.. .+.+..+...+++++.++|||||.++
T Consensus 129 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 77899999876 45555667789999999999999987
No 154
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.56 E-value=2e-14 Score=118.55 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=91.0
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFP 172 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~ 172 (290)
.+...++..+.. .++.+|||||||+|.++..+++. +.+|+++|+|+.+++.|+++. ...+++++.+|..+....
T Consensus 64 ~~~~~~~~~l~~-~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 64 YMVARMTELLEL-TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc
Confidence 344455555544 37899999999999999999998 689999999999999999874 234789999999776555
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 173 TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+++||+|++..+++++++ .+.++|+|||.+++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 678999999999999885 588999999999997654
No 155
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=2.9e-14 Score=123.06 Aligned_cols=125 Identities=19% Similarity=0.153 Sum_probs=99.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||+|||+|.++..+++.... +|+|+|+|+.+++.|+++.. .++++++++|+.+++. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 6899999999999999999998433 79999999999999998743 2348899999988765 667999998533
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
.....+++++.++|+|||.+++.+....... .-...+++.+.++++||++..
T Consensus 202 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM----------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT----------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ---hhHHHHHHHHHHHCCCCeEEEEEEeeccccc----------cccHHHHHHHHHHHcCCeeEE
Confidence 3345789999999999999999776532110 012457888999999998766
No 156
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.55 E-value=5.1e-14 Score=117.04 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=99.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCC-CccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTD-YADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~-~~D~i~~~~~ 184 (290)
++.+|+|||||+|.+++.+++..|..+|+++|+++.+++.|+++.. .+++++..+|..+ +++.+ +||+|+...+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGM 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCC
Confidence 7789999999999999999998777899999999999999998743 2358999999854 22322 5999987654
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
... -...++......|+++|.+++... . ..+.++++|.+.||.+++..-+
T Consensus 94 Gg~--~i~~Il~~~~~~L~~~~~lVlq~~-~-----------------~~~~vr~~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 94 GGR--LIARILEEGLGKLANVERLILQPN-N-----------------REDDLRIWLQDHGFQIVAESIL 143 (225)
T ss_dssp CHH--HHHHHHHHTGGGCTTCCEEEEEES-S-----------------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred ChH--HHHHHHHHHHHHhCCCCEEEEECC-C-----------------CHHHHHHHHHHCCCEEEEEEEE
Confidence 321 135789999999999999888643 1 3578899999999998887644
No 157
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=3.6e-14 Score=118.21 Aligned_cols=126 Identities=10% Similarity=0.051 Sum_probs=101.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGS 184 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~ 184 (290)
.++.+|+|||||+|.+++.+++..+..+|+++|+++.+++.|+++.. .+++++..+|..+...++++||+|++.++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 37789999999999999999998667799999999999999998743 24699999999775544446999887655
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.. .-...++......|+++|.+++.... ..+.++++|.+.||.+++..-+
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp~~------------------~~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQPNN------------------REDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEESS------------------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEECCC------------------ChHHHHHHHHHCCCEEEEEEEE
Confidence 43 12346888899999999999887532 3578999999999998887755
No 158
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=1.8e-14 Score=114.88 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 108 SNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 108 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
..++.+|||+|||+|.++..+++.+ ++.+++++|+++ +++. .++++...|+.+.+ +++++||+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 3478899999999999999999985 468999999998 6432 57899999998865 66678999
Q ss_pred EEecCcccccCCH-----------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCc
Q 022929 179 YVSAGSIEYWPDP-----------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK 247 (290)
Q Consensus 179 i~~~~~l~~~~~~-----------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 247 (290)
|++...+++..+. ..+++++.++|+|||.+++...... +..++.+.+++. |.
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~-~~ 154 (180)
T 1ej0_A 92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE----------------GFDEYLREIRSL-FT 154 (180)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST----------------THHHHHHHHHHH-EE
T ss_pred EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC----------------cHHHHHHHHHHh-hh
Confidence 9999988887765 6899999999999999998765443 234566666664 76
Q ss_pred EEEEE
Q 022929 248 DVQLK 252 (290)
Q Consensus 248 ~v~~~ 252 (290)
.+++.
T Consensus 155 ~~~~~ 159 (180)
T 1ej0_A 155 KVKVR 159 (180)
T ss_dssp EEEEE
T ss_pred hEEee
Confidence 66554
No 159
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=4.8e-15 Score=119.02 Aligned_cols=119 Identities=11% Similarity=0.030 Sum_probs=87.6
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCC-C
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAED-L 169 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~-l 169 (290)
+.+...+++.+....++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+++... .+++++.+|+.+ +
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 3344444444432236789999999999999999887 557999999999999999987532 358899999866 3
Q ss_pred CCCCCCccEEEecCcccccCCHHHHHHHHH--hccCCCCEEEEEccCC
Q 022929 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAY--RVLKLGGKACIIGPVY 215 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~ 215 (290)
+..+++||+|++...++ .......++.+. ++|+|||.+++.....
T Consensus 95 ~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 33345699999986653 233456777776 9999999999986554
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=5e-14 Score=117.90 Aligned_cols=111 Identities=21% Similarity=0.170 Sum_probs=89.9
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC-CceEEEcCCCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~v~~~~~d~~~l~~~~~ 174 (290)
.+...+++.+.. .++.+|||||||+|.++..+++. +.+|+++|+|+.+++.++++.... +++++.+|+.+....++
T Consensus 57 ~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~ 133 (231)
T 1vbf_A 57 NLGIFMLDELDL-HKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEK 133 (231)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGC
T ss_pred HHHHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCC
Confidence 444455555544 37889999999999999999998 479999999999999999885433 78999999976322356
Q ss_pred CccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 175 YADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+||+|++..++++++ +++.++|+|||.+++.....
T Consensus 134 ~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 134 PYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 799999999999876 36889999999999986544
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.52 E-value=1.5e-13 Score=122.70 Aligned_cols=143 Identities=20% Similarity=0.185 Sum_probs=108.6
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCC
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDA 166 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~ 166 (290)
.+..+.+...++...... ++.+|||+|||+|.++..++... +..+++|+|+|+.+++.|+++.. ..++++.++|+
T Consensus 185 a~l~~~la~~l~~~~~~~-~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~ 263 (354)
T 3tma_A 185 GSLTPVLAQALLRLADAR-PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA 263 (354)
T ss_dssp CSCCHHHHHHHHHHTTCC-TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG
T ss_pred CCcCHHHHHHHHHHhCCC-CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh
Confidence 344556666666655543 78899999999999999999986 66899999999999999998743 22689999999
Q ss_pred CCCCCCCCCccEEEecCcccccC--------CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHH
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWP--------DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYI 238 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~--------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (290)
.+++.+.+.||+|+++-...... .+..+++++.++|+|||.+++.++ +.+.+.
T Consensus 264 ~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-------------------~~~~~~ 324 (354)
T 3tma_A 264 RHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-------------------RPALLK 324 (354)
T ss_dssp GGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-------------------CHHHHH
T ss_pred hhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-------------------CHHHHH
Confidence 98876666799999964433211 125789999999999999999864 234455
Q ss_pred HHHHHCCCcEEEEEEc
Q 022929 239 EWFQKAGFKDVQLKRI 254 (290)
Q Consensus 239 ~ll~~aGf~~v~~~~~ 254 (290)
++++ .||+..+...+
T Consensus 325 ~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 325 RALP-PGFALRHARVV 339 (354)
T ss_dssp HHCC-TTEEEEEEEEC
T ss_pred HHhh-cCcEEEEEEEE
Confidence 5555 89987766554
No 162
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.52 E-value=6.5e-14 Score=117.57 Aligned_cols=126 Identities=14% Similarity=0.091 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGS 184 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~ 184 (290)
.++.+|||||||+|.+++.+++..+..+|+++|+++.+++.|+++.. .+++++..+|..+...++.+||+|++.++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 37789999999999999999998666799999999999999998843 24589999999775443335999987554
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.. .-...++.+....|++++.+++.... ..+.++++|.+.||.+++..-+
T Consensus 100 Gg--~lI~~IL~~~~~~L~~~~~lIlq~~~------------------~~~~lr~~L~~~Gf~i~~E~lv 149 (244)
T 3gnl_A 100 GG--TLIRTILEEGAAKLAGVTKLILQPNI------------------AAWQLREWSEQNNWLITSEAIL 149 (244)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEESS------------------CHHHHHHHHHHHTEEEEEEEEE
T ss_pred ch--HHHHHHHHHHHHHhCCCCEEEEEcCC------------------ChHHHHHHHHHCCCEEEEEEEE
Confidence 32 11346888999999999999887532 3578899999999998877654
No 163
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.52 E-value=1.2e-14 Score=117.46 Aligned_cols=121 Identities=9% Similarity=0.026 Sum_probs=90.3
Q ss_pred ccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCC
Q 022929 93 WTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAED 168 (290)
Q Consensus 93 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~ 168 (290)
..+.+...+++.+....++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+++... .+++++.+|+.+
T Consensus 27 ~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 344454444444422236789999999999999988875 457999999999999999877432 368999999865
Q ss_pred CC----CCCCCccEEEecCcccccCCHHHHHHHH--HhccCCCCEEEEEccCC
Q 022929 169 LP----FPTDYADRYVSAGSIEYWPDPQRGIREA--YRVLKLGGKACIIGPVY 215 (290)
Q Consensus 169 l~----~~~~~~D~i~~~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~ 215 (290)
.. ..+++||+|++...++ .......++.+ .++|+|||.+++.....
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 21 2256799999987743 45566777777 88999999999876554
No 164
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=3.8e-14 Score=127.31 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=89.4
Q ss_pred ccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC------CCceEEEcCCCCCCCCCCC
Q 022929 102 LEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------KECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 102 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~v~~~~~d~~~l~~~~~~ 175 (290)
++.+... ++.+|||+|||+|.++..+++..|+.+|+++|+|+.+++.++++... .+++++..|+.+ ++++++
T Consensus 215 l~~l~~~-~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~ 292 (375)
T 4dcm_A 215 MQHLPEN-LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFR 292 (375)
T ss_dssp HHTCCCS-CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTC
T ss_pred HHhCccc-CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCC
Confidence 4444332 56899999999999999999998889999999999999999987532 247889999987 566678
Q ss_pred ccEEEecCcccccCC-----HHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 176 ADRYVSAGSIEYWPD-----PQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
||+|+++..+++... ..++++++.++|+|||.++++.....
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 999999988875322 23689999999999999999765443
No 165
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.51 E-value=6.1e-14 Score=116.83 Aligned_cols=105 Identities=14% Similarity=0.233 Sum_probs=84.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCC-CC-CC----CCCccE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAED-LP-FP----TDYADR 178 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~-l~-~~----~~~~D~ 178 (290)
++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++.. .++++++.+|+.+ ++ +. .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 678999999999999999999764 7899999999999999998642 2358999999743 22 22 257999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
|++....++..+...+++.+ ++|+|||.+++.+...
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 99988777766666777777 9999999998876554
No 166
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=3.3e-14 Score=120.70 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=83.6
Q ss_pred CCCEEEEEcCccchhHHHHHhh--CCCCeEEEEeCCHHHHHHHhhhCCCC-------C----------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH--VDAKNVTILDQSPHQLAKAKQKEPLK-------E---------------------- 158 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~--~~~~~v~~vD~s~~~~~~a~~~~~~~-------~---------------------- 158 (290)
++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.|+++.... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5689999999999999999987 56789999999999999999764332 1
Q ss_pred ---ce-------------EEEcCCCCCCC-----CCCCccEEEecCcccccCC---------HHHHHHHHHhccCCCCEE
Q 022929 159 ---CK-------------IVEGDAEDLPF-----PTDYADRYVSAGSIEYWPD---------PQRGIREAYRVLKLGGKA 208 (290)
Q Consensus 159 ---v~-------------~~~~d~~~l~~-----~~~~~D~i~~~~~l~~~~~---------~~~~l~~~~~~L~pgG~l 208 (290)
++ +.++|+.+... ...+||+|+++..+.+..+ ...+++++.++|+|||.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 56 99999977321 3447999999876554433 347999999999999999
Q ss_pred EEEccC
Q 022929 209 CIIGPV 214 (290)
Q Consensus 209 ~i~~~~ 214 (290)
++....
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 986443
No 167
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.51 E-value=1.5e-14 Score=128.95 Aligned_cols=130 Identities=18% Similarity=0.146 Sum_probs=95.4
Q ss_pred HHhHHhHhhhcccCC-CcccHHHHHhhccccCCCCCCCEEEEEcCc------cchhHHHHHhh-CCCCeEEEEeCCHHHH
Q 022929 76 FYRFLSIVYDHVINP-GHWTEDMRDDALEPADLSNRNMLVVDVGGG------TGFTTLGIVKH-VDAKNVTILDQSPHQL 147 (290)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G------~G~~~~~l~~~-~~~~~v~~vD~s~~~~ 147 (290)
.++..+..|..-... ..+...+.+.++..+. .++.+||||||| +|..+..+++. +|+.+|+|+|+|+.+.
T Consensus 183 ~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 183 DLSELSSRYFTPKFGFLHWFTPHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp CHHHHHHHTTCTTBSSSCBCHHHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred cHHHHHHHhCCCcccccchHHHHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 355556666532222 2333444555555543 257899999999 66666666654 5789999999999973
Q ss_pred HHHhhhCCCCCceEEEcCCCCCCCC------CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 148 AKAKQKEPLKECKIVEGDAEDLPFP------TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 148 ~~a~~~~~~~~v~~~~~d~~~l~~~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
....+++++++|+.++++. +++||+|++.. .++..+....++++.++|||||.+++.+..
T Consensus 261 ------~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 261 ------VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ------GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ------hcCCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1346899999999988766 57899999875 466677789999999999999999998765
No 168
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=6.1e-14 Score=127.37 Aligned_cols=120 Identities=11% Similarity=0.092 Sum_probs=92.3
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHH-------hhhC---C--CCCceEE
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA-------KQKE---P--LKECKIV 162 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a-------~~~~---~--~~~v~~~ 162 (290)
..+...+++.+... ++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| +++. . ..+++++
T Consensus 228 p~~v~~ml~~l~l~-~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLK-KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcCCC-CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 44555666666543 78999999999999999999987667899999999998888 6552 2 3578898
Q ss_pred EcCCCCC--CC--CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 163 EGDAEDL--PF--PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 163 ~~d~~~l--~~--~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
.+|.... ++ ..++||+|++++++ +.++....++++.+.|||||.+++.++..+
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred EcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 8765321 12 23579999998776 446677889999999999999999865543
No 169
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.51 E-value=2.1e-13 Score=115.23 Aligned_cols=130 Identities=16% Similarity=0.165 Sum_probs=99.8
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCC
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~ 175 (290)
.++..... .++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++.. ..++++...|+.+...++++
T Consensus 82 ~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKLNL-NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHhcCC-CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 34444443 37889999999999999999998 7899999999999999998732 25788999999874435667
Q ss_pred ccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 176 ADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
||+|++ +.+++..+++++.++|+|||.+++..+... ...++.+.+++. |..++....
T Consensus 159 ~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~-f~~~~~~~~ 215 (248)
T 2yvl_A 159 FHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPTAN----------------QVIKLLESIENY-FGNLEVVEI 215 (248)
T ss_dssp BSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESSHH----------------HHHHHHHHSTTT-EEEEEEEEE
T ss_pred ccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHhh-CCcceEEEe
Confidence 999997 345677899999999999999999875421 124555666666 876666544
No 170
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=1.1e-13 Score=113.27 Aligned_cols=118 Identities=13% Similarity=0.184 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCC--CCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----------------
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVD--AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---------------- 170 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---------------- 170 (290)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.. ...+++++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------CCTTCEEEECCTTTTSSCCC-----------C
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------CCCCceEEEccccchhhhhhccccccccccch
Confidence 4778999999999999999999887 6899999999831 2357899999998765
Q ss_pred ---------CCCCCccEEEecCcccccC----CH-------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhc
Q 022929 171 ---------FPTDYADRYVSAGSIEYWP----DP-------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWML 230 (290)
Q Consensus 171 ---------~~~~~~D~i~~~~~l~~~~----~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~ 230 (290)
+++.+||+|++...+++.. +. ..+++++.++|+|||.+++......
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~-------------- 158 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS-------------- 158 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--------------
T ss_pred hhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC--------------
Confidence 4566899999988776542 11 1378899999999999988643321
Q ss_pred CCCHHHHHHHHHHCCCcEEEE
Q 022929 231 FPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 231 ~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+..++...++. .|..+.+
T Consensus 159 --~~~~l~~~l~~-~f~~v~~ 176 (201)
T 2plw_A 159 --QTNNLKTYLKG-MFQLVHT 176 (201)
T ss_dssp --THHHHHHHHHT-TEEEEEE
T ss_pred --CHHHHHHHHHH-HHheEEE
Confidence 23456666665 4665544
No 171
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.50 E-value=1.5e-14 Score=118.85 Aligned_cols=104 Identities=13% Similarity=0.078 Sum_probs=83.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---C--CCceEEEcCCCCCC--CCCCC-ccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---L--KECKIVEGDAEDLP--FPTDY-ADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~--~~v~~~~~d~~~l~--~~~~~-~D~i~~ 181 (290)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|+++.. . .+++++.+|+.++. ..+++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 56899999999999999877762 4699999999999999998742 2 47899999986542 23568 999999
Q ss_pred cCcccccCCHHHHHHHH--HhccCCCCEEEEEccCC
Q 022929 182 AGSIEYWPDPQRGIREA--YRVLKLGGKACIIGPVY 215 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~ 215 (290)
...++ ..+...+++.+ .++|+|||.+++.....
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 87754 55667788888 67899999999876543
No 172
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=5.5e-14 Score=118.43 Aligned_cols=122 Identities=12% Similarity=0.031 Sum_probs=94.0
Q ss_pred CCCEEEEEcCccchhHHHHHhh----CCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC---CCC-CCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH----VDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL---PFP-TDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l---~~~-~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++. .++.+|+++|+|+.+++.|+.. ..+++++++|+.+. +.. +.+||+|++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--MENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--CTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--CCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 4679999999999999999987 5678999999999999888743 35799999999874 433 336999998
Q ss_pred cCcccccCCHHHHHHHHHh-ccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHC--CCcE
Q 022929 182 AGSIEYWPDPQRGIREAYR-VLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA--GFKD 248 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~-~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a--Gf~~ 248 (290)
... | .+...+++++.+ +|||||.+++.+.. ..... ++.+.+.+++++. +|++
T Consensus 159 d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~--------~~~~~----~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMI--------PYWYR----YAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCH--------HHHHH----HCHHHHHHHHHTTTTTEEE
T ss_pred CCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCc--------ccccc----cCHHHHHHHHHhCcccEEE
Confidence 665 2 367789999997 99999999997651 00001 1345788888887 5754
No 173
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.50 E-value=1.4e-14 Score=133.92 Aligned_cols=119 Identities=17% Similarity=0.195 Sum_probs=92.0
Q ss_pred cCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEE
Q 022929 88 INPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVE 163 (290)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~ 163 (290)
+.+...++.+...+++.+... ++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++.. ..+++++.
T Consensus 137 L~d~~~t~~~~~~il~~l~~~-~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~ 213 (480)
T 3b3j_A 137 MQDYVRTGTYQRAILQNHTDF-KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIP 213 (480)
T ss_dssp HHHHHHHHHHHHHHHHTGGGT-TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred hcChHhHHHHHHHHHHhhhhc-CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEE
Confidence 333344555566666655433 6789999999999999998885 567999999998 8888876632 25799999
Q ss_pred cCCCCCCCCCCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEE
Q 022929 164 GDAEDLPFPTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 164 ~d~~~l~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i 210 (290)
+|+.+++++ ++||+|++..+++++.+. ...+.++.++|+|||.+++
T Consensus 214 ~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 214 GKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999887765 469999998877777544 4677788999999999985
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=1.1e-13 Score=121.76 Aligned_cols=111 Identities=21% Similarity=0.208 Sum_probs=90.1
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPF 171 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~ 171 (290)
.+...++..+... ++.+|||||||+|.++..+++..+ ..+|+++|+|+++++.|+++. ...++++..+|+.+.+.
T Consensus 62 ~~~~~l~~~l~~~-~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLD-KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCC-CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 4455555555443 789999999999999999998865 367999999999999999874 23468999999977544
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.+++||+|++..++++++ +++.+.|||||.+++...
T Consensus 141 ~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred cCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 456799999999999887 578889999999999754
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=6.5e-14 Score=123.70 Aligned_cols=99 Identities=26% Similarity=0.292 Sum_probs=82.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCc-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGS- 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~- 184 (290)
++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++.. .++++++.+|+.++++++++||+|++..+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 6789999999999999999887 45699999999 58888887632 24689999999998887778999999754
Q ss_pred --ccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 185 --IEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 185 --l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
+.+......++.++.++|+|||.++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 44556678899999999999999973
No 176
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.49 E-value=1.1e-13 Score=117.17 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=82.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-----------CCCCceEEEcCCCC-CC--CCCCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-----------PLKECKIVEGDAED-LP--FPTDY 175 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~v~~~~~d~~~-l~--~~~~~ 175 (290)
++.+|||||||+|.++..+++..+...++|+|+|+.+++.++++. ...++.++.+|+.+ ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 678999999999999999999987789999999999999987652 33579999999976 55 66778
Q ss_pred ccEEEecCcccccCC--------HHHHHHHHHhccCCCCEEEEEcc
Q 022929 176 ADRYVSAGSIEYWPD--------PQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 176 ~D~i~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+|.|++...-.+... ...+++++.++|+|||.+++.+.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999985432111100 14799999999999999998653
No 177
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.49 E-value=5.3e-14 Score=125.30 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=89.1
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLP 170 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~ 170 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++.. ..+++++.+|+.+++
T Consensus 36 ~~y~~~i~~~l~~~-~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 112 (348)
T 2y1w_A 36 GTYQRAILQNHTDF-KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 112 (348)
T ss_dssp HHHHHHHHHTGGGT-TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHHHHHHHhccccC-CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC
Confidence 34445555555443 7889999999999999999886 457999999996 7788876532 257999999999887
Q ss_pred CCCCCccEEEecCcccccCC--HHHHHHHHHhccCCCCEEEEE
Q 022929 171 FPTDYADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~ 211 (290)
++ ++||+|++..+++|+.. ....+.++.++|||||.+++.
T Consensus 113 ~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 LP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 65 46999999988887753 457888899999999999854
No 178
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.48 E-value=8.9e-14 Score=124.25 Aligned_cols=130 Identities=22% Similarity=0.223 Sum_probs=95.5
Q ss_pred HHhHHhHhhhcccCCCcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh--
Q 022929 76 FYRFLSIVYDHVINPGHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-- 153 (290)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-- 153 (290)
+|++.. ++..++.+...+..+...+....... ++++|||||||+|.++..+++. +..+|+|||.|+ +++.|++.
T Consensus 51 sY~~~~-iH~~ML~D~~Rt~aY~~Ai~~~~~~~-~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~ 126 (376)
T 4hc4_A 51 CYSDVS-VHEEMIADRVRTDAYRLGILRNWAAL-RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVR 126 (376)
T ss_dssp CHHHHH-HHHHHHHCHHHHHHHHHHHHTTHHHH-TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHH
T ss_pred hccCcH-HHHHHhCCHHHHHHHHHHHHhCHHhc-CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHH
Confidence 344433 44455665555566665555433322 7899999999999998887776 457899999985 66777654
Q ss_pred --CCCCCceEEEcCCCCCCCCCCCccEEEec---CcccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 154 --EPLKECKIVEGDAEDLPFPTDYADRYVSA---GSIEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 154 --~~~~~v~~~~~d~~~l~~~~~~~D~i~~~---~~l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
....+++++.+|++++.+++ ++|+|++. ..+.+......++....++|+|||.++-
T Consensus 127 ~n~~~~~i~~i~~~~~~~~lpe-~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 127 FNGLEDRVHVLPGPVETVELPE-QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp HTTCTTTEEEEESCTTTCCCSS-CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred HcCCCceEEEEeeeeeeecCCc-cccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 33456999999999988775 59999984 4455666778899999999999998764
No 179
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=1.6e-13 Score=113.59 Aligned_cols=112 Identities=23% Similarity=0.233 Sum_probs=88.2
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPF 171 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~ 171 (290)
.+...++..+.. .++.+|||||||+|.++..+++.. +..+|+++|+|+.+++.++++.. ..++++..+|+.....
T Consensus 64 ~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 64 HMVGMMCELLDL-KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG
T ss_pred HHHHHHHHhhCC-CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC
Confidence 344445554443 378899999999999999999986 34799999999999999987642 2468899999854222
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
..++||+|++..++++++ +++.++|+|||.+++....
T Consensus 143 ~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 256799999999999877 4889999999999987643
No 180
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.48 E-value=5.1e-14 Score=115.75 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=82.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCC-CCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAED-LPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~-l~~~~~~~D~i~~~~~l 185 (290)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|+++.. ..+++++++|+.+ ++..+++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 56899999999999999877762 3599999999999999998743 2478999999865 45555679999998764
Q ss_pred cccCCHHHHHHHHHh--ccCCCCEEEEEcc
Q 022929 186 EYWPDPQRGIREAYR--VLKLGGKACIIGP 213 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~--~L~pgG~l~i~~~ 213 (290)
+ ......+++.+.+ +|+|||.+++...
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 3 5566778888866 5999999998754
No 181
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=9.9e-15 Score=116.11 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=81.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCC-C-C--CCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDL-P-F--PTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l-~-~--~~~~~D~i~~~~ 183 (290)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++.... +++++.+|+.+. + . ..++||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 5789999999999999999988 455999999999999999864321 688999998652 2 1 123699999987
Q ss_pred cccccCCHHHHHHHHH--hccCCCCEEEEEccCCC
Q 022929 184 SIEYWPDPQRGIREAY--RVLKLGGKACIIGPVYP 216 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~ 216 (290)
.++ .+....++.+. ++|+|||.+++......
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 765 55566777777 99999999999876544
No 182
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.46 E-value=7.6e-14 Score=123.32 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=80.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CC--CceEEEcCCCCCCC----CCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LK--ECKIVEGDAEDLPF----PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~--~v~~~~~d~~~l~~----~~~~~D~i~ 180 (290)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++.. .. +++++++|+.++.. ..++||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 6789999999999999999987 5599999999999999998743 12 48899999866421 145799999
Q ss_pred ecCc----------ccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 181 SAGS----------IEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 181 ~~~~----------l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+.-- .++..+...+++.+.++|+|||.+++.....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 8432 1223345689999999999999987765443
No 183
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.46 E-value=2e-13 Score=119.89 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=98.2
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCCCCCccEEEec--
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFPTDYADRYVSA-- 182 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~~~~~D~i~~~-- 182 (290)
.++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++. ...+++++++|+.+++..+++||+|++.
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 3788999999999999999998864 489999999999999998874 2346899999998765445579999983
Q ss_pred ----CcccccCCH----------------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHH
Q 022929 183 ----GSIEYWPDP----------------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242 (290)
Q Consensus 183 ----~~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 242 (290)
.++.+.++. ..+++++.++|||||.+++.++..... .+.+.+..+++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~-------------Ene~~v~~~l~ 263 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE-------------ENEFVIQWALD 263 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG-------------GTHHHHHHHHH
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH-------------HhHHHHHHHHh
Confidence 223332221 478999999999999999987654221 03345667888
Q ss_pred HCCCcEEEEE
Q 022929 243 KAGFKDVQLK 252 (290)
Q Consensus 243 ~aGf~~v~~~ 252 (290)
+.||+++.+.
T Consensus 264 ~~~~~~~~~~ 273 (315)
T 1ixk_A 264 NFDVELLPLK 273 (315)
T ss_dssp HSSEEEECCC
T ss_pred cCCCEEecCC
Confidence 8898776543
No 184
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.46 E-value=2.4e-13 Score=115.32 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=84.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCC-CCCC--CCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAED-LPFP--TDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~-l~~~--~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++.+| +.+|+++|+|+.+++.|+++.. ..+++++.+|+.+ ++.. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 678999999999999999999987 7899999999999999998742 2479999999854 2322 347999998
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
... ..+...+++++.++|+|||.+++.+....
T Consensus 143 d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 143 DAD---KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSC---GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred CCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 653 44566799999999999999988766543
No 185
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.46 E-value=6.2e-13 Score=108.79 Aligned_cols=118 Identities=18% Similarity=0.219 Sum_probs=89.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++.. +++++++|+.+++ ++||+|+++..+++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG--GVNFMVADVSEIS---GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGGCC---CCEEEEEECCCC----
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC--CCEEEECcHHHCC---CCeeEEEECCCchhcc
Confidence 6789999999999999999887 44589999999999999999876 7899999998865 5699999999988886
Q ss_pred C--HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 190 D--PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 190 ~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
+ ...+++++.+.+ |.+++..... +...+.+.++++| ++..+...
T Consensus 125 ~~~~~~~l~~~~~~~---g~~~~~~~~~-----------------~~~~~~~~~~~~g-~~~~~~~~ 170 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS---MWIYSIGNAK-----------------ARDFLRREFSARG-DVFREEKV 170 (200)
T ss_dssp ---CHHHHHHHHHHE---EEEEEEEEGG-----------------GHHHHHHHHHHHE-EEEEEEEE
T ss_pred CchhHHHHHHHHHhc---CcEEEEEcCc-----------------hHHHHHHHHHHCC-CEEEEEEE
Confidence 4 246888898888 4444443110 2345677888888 65555443
No 186
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.45 E-value=6e-14 Score=124.68 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=86.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++..|..+++++|+|+.+++.++++.... .++++.+|+.+.+ +++||+|+++..+++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCS
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCccc
Confidence 567999999999999999999977789999999999999999875322 3677888887643 567999999998875
Q ss_pred c-----CCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 188 W-----PDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 188 ~-----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
. .+...+++++.++|+|||.+++.....
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2 345689999999999999999986544
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=8.2e-14 Score=116.20 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=88.4
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC---C--CCceEEEcCCC
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP---L--KECKIVEGDAE 167 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~---~--~~v~~~~~d~~ 167 (290)
...+...++..... +++.+|||||||+|..+..+++..+ +.+|+++|+|+++++.|+++.. . .+++++.+|+.
T Consensus 41 ~~~~l~~l~~~~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~ 119 (221)
T 3dr5_A 41 TGQLLTTLAATTNG-NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHHHHSCC-TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH
T ss_pred HHHHHHHHHHhhCC-CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH
Confidence 34444444433322 1345999999999999999999865 7899999999999999988742 2 47999999885
Q ss_pred CC-C-CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 168 DL-P-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 168 ~l-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+. + +.+++||+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 120 ~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 120 DVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp HHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 43 2 33567999998653 345667999999999999999986544
No 188
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.45 E-value=6.5e-13 Score=119.32 Aligned_cols=140 Identities=18% Similarity=0.172 Sum_probs=105.3
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCC
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAE 167 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~ 167 (290)
+..+.+...++... . .++.+|||+|||+|.++..++...+..+++|+|+|+.+++.|+++... .++++.++|+.
T Consensus 201 ~l~~~la~~l~~~~-~-~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 201 HLKASIANAMIELA-E-LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CCCHHHHHHHHHHH-T-CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred CccHHHHHHHHHhh-c-CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 34566666666555 3 478999999999999999999985445999999999999999988432 36899999999
Q ss_pred CCCCCCCCccEEEecCccccc----CC----HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHH
Q 022929 168 DLPFPTDYADRYVSAGSIEYW----PD----PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIE 239 (290)
Q Consensus 168 ~l~~~~~~~D~i~~~~~l~~~----~~----~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (290)
+++.++++||+|+++-..... .. ...+++.+.++| +|.+++... +.+.+.+
T Consensus 279 ~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------------~~~~~~~ 337 (373)
T 3tm4_A 279 QLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------------EKKAIEE 337 (373)
T ss_dssp GGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------------CHHHHHH
T ss_pred hCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------------CHHHHHH
Confidence 988777789999996543321 11 256888899988 455444432 4577888
Q ss_pred HHHHCCCcEEEEEEc
Q 022929 240 WFQKAGFKDVQLKRI 254 (290)
Q Consensus 240 ll~~aGf~~v~~~~~ 254 (290)
.+++.||+..+...+
T Consensus 338 ~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 338 AIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEE
Confidence 999999998776554
No 189
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.45 E-value=2.5e-13 Score=114.04 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=85.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~~~~~~D~i~~~~ 183 (290)
++.+|||||||+|..+..+++..++.+|+++|+++.+++.|+++.. ..+++++.+|+.+. + ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 6789999999999999999997778999999999999999998742 24799999999663 3 2356799999764
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
. ..+...+++.+.++|+|||.+++.+...
T Consensus 151 ~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 151 A---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp T---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred c---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 3 4566789999999999999998865544
No 190
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.45 E-value=1.9e-15 Score=127.53 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=102.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++... .+++++++|+.+++ ++++||+|++...+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 6789999999999999999997 58999999999999999877431 36899999997765 45679999999999
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
++..+....+.++.++|+|||.+++...... ............+.+++..++...|.-.++.....
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~----~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~ 220 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFRLSKKI----TNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLN 220 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHHHHHHH----CSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEET
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHHHHHhh----CCceEEECCCCCCHHHHHHHhccCCCEEEEehhhc
Confidence 9887777677889999999998654321000 00000000112367788888888776555444433
No 191
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.44 E-value=4.9e-13 Score=118.43 Aligned_cols=150 Identities=19% Similarity=0.169 Sum_probs=86.0
Q ss_pred hccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC--------------CCCceEEEcC
Q 022929 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP--------------LKECKIVEGD 165 (290)
Q Consensus 101 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~--------------~~~v~~~~~d 165 (290)
++..+.. .++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|+++.. ..+++++.+|
T Consensus 97 ~l~~l~~-~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 97 ILSMMDI-NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHTC-CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHhcCC-CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 3443333 378999999999999999999974 45899999999999999998743 2579999999
Q ss_pred CCCC--CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchh-HhhhhHH----------------
Q 022929 166 AEDL--PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFW-LSRYFAD---------------- 226 (290)
Q Consensus 166 ~~~l--~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~-~~~~~~~---------------- 226 (290)
+.+. ++++++||+|++.. +++..+++++.++|+|||.+++..+...... ....+..
T Consensus 176 ~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 250 (336)
T 2b25_A 176 ISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVR 250 (336)
T ss_dssp TTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCC
T ss_pred hHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEeccc
Confidence 9876 45666799999843 3444589999999999999998766433211 1111111
Q ss_pred HhhcC---CCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 227 VWMLF---PKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 227 ~~~~~---~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
.|... ....++.+.|+++||+.+++....+
T Consensus 251 ~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~~ 283 (336)
T 2b25_A 251 DWLVCLAKQKNGILAQKVESKINTDVQLDSQEK 283 (336)
T ss_dssp CEEECC---------------------------
T ss_pred ceEEEeecccccchhhhhccccccccccccccc
Confidence 01111 1123788999999999998877653
No 192
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.44 E-value=2e-12 Score=111.30 Aligned_cols=132 Identities=17% Similarity=0.070 Sum_probs=96.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-------CCCCceEEEcCCCC-CCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------PLKECKIVEGDAED-LPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~v~~~~~d~~~-l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|+++. ..++++++.+|..+ ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 568999999999999999998766789999999999999999875 23579999999854 2333567999999
Q ss_pred cCcccccCC----HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 182 AGSIEYWPD----PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 182 ~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.......+. ...+++.+.++|+|||.+++...... . ... ....+.+.+++. |..+.....
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~-~-~~~----------~~~~~~~~l~~~-F~~v~~~~~ 218 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW-F-TPE----------LITNVQRDVKEI-FPITKLYTA 218 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT-T-CHH----------HHHHHHHHHHTT-CSEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc-c-cHH----------HHHHHHHHHHHh-CCCeEEEEE
Confidence 654332221 25799999999999999988743210 0 000 134566677776 776665543
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.43 E-value=4.5e-13 Score=116.32 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=81.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--------CCCceEEEcCCCCC-CCCCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------LKECKIVEGDAEDL-PFPTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~v~~~~~d~~~l-~~~~~~~D~i~ 180 (290)
++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++. ..+++++.+|..+. ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 5689999999999999999998667899999999999999998742 35799999998664 33456799999
Q ss_pred ecCcccccCCH----HHHHHHHHhccCCCCEEEEEc
Q 022929 181 SAGSIEYWPDP----QRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 181 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~ 212 (290)
+.......+.. ..+++.+.++|+|||.+++..
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 96543322222 579999999999999998864
No 194
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.43 E-value=3.3e-13 Score=113.15 Aligned_cols=103 Identities=11% Similarity=0.173 Sum_probs=86.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-CCC--CCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-PFP--TDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~~~--~~~~D~i~~~ 182 (290)
++.+|||||||+|..+..+++..|+.+|+++|+++.+++.|+++.. ..+++++.+|+.+. +.. +++||+|++.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 6789999999999999999999888999999999999999998732 24689999998663 322 4679999987
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
... .+...+++.+.++|+|||.+++.+...
T Consensus 134 ~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 134 AAK---GQYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp GGG---SCHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred CCH---HHHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 664 367789999999999999999976544
No 195
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.43 E-value=3.6e-13 Score=113.17 Aligned_cols=112 Identities=27% Similarity=0.375 Sum_probs=88.1
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPF 171 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~ 171 (290)
..+...+++.+.. .++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|+++. ...++++..+|. ..++
T Consensus 77 ~~~~~~~~~~l~~-~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~ 153 (235)
T 1jg1_A 77 PHMVAIMLEIANL-KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGF 153 (235)
T ss_dssp HHHHHHHHHHHTC-CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCC
T ss_pred HHHHHHHHHhcCC-CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCC
Confidence 3445555555544 3788999999999999999999865 89999999999999998873 234688999997 2244
Q ss_pred CC-CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 172 PT-DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 172 ~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
++ .+||+|++..++++++ +++.+.|+|||.+++.....
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 33 3499999999988776 37889999999999976543
No 196
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=5.3e-13 Score=111.28 Aligned_cols=100 Identities=18% Similarity=0.160 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCC--------CCCceEEEcCCCCCCCCCCCccEE
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP--------LKECKIVEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~--------~~~v~~~~~d~~~l~~~~~~~D~i 179 (290)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.++++.. ..+++++..|+...+...++||+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 478999999999999999999875 34699999999999999987643 247899999987655455679999
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
++...++++. +++.++|||||.+++....
T Consensus 156 ~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 156 HVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 9988876553 6889999999999987543
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=1.9e-13 Score=112.80 Aligned_cols=102 Identities=15% Similarity=0.191 Sum_probs=84.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-CCCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-PFPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~~~~~~~D~i~~~~ 183 (290)
++.+|||||||+|..+..+++..+ +.+|+++|+|+.+++.|+++.. .++++++.+|..+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 568999999999999999999877 7899999999999999987643 23588999998543 44446 99999873
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
. ..+...+++++.++|+|||.+++.+...
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 2 4567789999999999999998876544
No 198
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.42 E-value=2.7e-12 Score=115.29 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=96.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCC-CCC-CCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAED-LPF-PTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~-l~~-~~~~~D~i~~~~~ 184 (290)
++.+|||+| |+|.++..++...+..+|+++|+|+.+++.|+++.. ..+++++.+|+.+ ++. .+++||+|+++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 999999999988655799999999999999998742 2379999999987 663 3457999999876
Q ss_pred ccccCCHHHHHHHHHhccCCCCEE-EEEccCCCchhHhhhhHHHhhcCCCH---HHHHHHHH-HCCCcEEEEEE
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKA-CIIGPVYPTFWLSRYFADVWMLFPKE---EEYIEWFQ-KAGFKDVQLKR 253 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l-~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ll~-~aGf~~v~~~~ 253 (290)
++... ...+++++.++|+|||.+ ++....... +. ..+.+.+. +.||.+..+..
T Consensus 251 ~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 251 ETLEA-IRAFVGRGIATLKGPRCAGYFGITRRES---------------SLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp SSHHH-HHHHHHHHHHTBCSTTCEEEEEECTTTC---------------CHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred CchHH-HHHHHHHHHHHcccCCeEEEEEEecCcC---------------CHHHHHHHHHHHHHhcCcchhhhhh
Confidence 54332 578999999999999954 444322111 23 45667777 89998766543
No 199
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.42 E-value=1.7e-12 Score=114.10 Aligned_cols=103 Identities=21% Similarity=0.156 Sum_probs=82.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-------CCceEEEcCCCCC-CCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-------KECKIVEGDAEDL-PFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~v~~~~~d~~~l-~~~~~~~D~i~~ 181 (290)
++.+|||||||+|.++..+++..+..+++++|+|+.+++.|+++... .+++++.+|+.+. +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 56899999999999999999886778999999999999999988653 4689999998542 223467999998
Q ss_pred cCcccccC--CH--HHHHHHHHhccCCCCEEEEEc
Q 022929 182 AGSIEYWP--DP--QRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 182 ~~~l~~~~--~~--~~~l~~~~~~L~pgG~l~i~~ 212 (290)
...-...+ .. ..+++++.++|+|||.+++..
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 64322111 11 689999999999999999864
No 200
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.42 E-value=3.9e-13 Score=112.19 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC-----CCCeEEEEeCCHHHHHHHhhhCC--------CCCceEEEcCCCCCC----C
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV-----DAKNVTILDQSPHQLAKAKQKEP--------LKECKIVEGDAEDLP----F 171 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~-----~~~~v~~vD~s~~~~~~a~~~~~--------~~~v~~~~~d~~~l~----~ 171 (290)
.++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|+++.. ..+++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 478999999999999999999885 34699999999999999987732 357899999997654 4
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
..++||+|++...++++ ++++.++|+|||.+++...
T Consensus 159 ~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 45679999999888765 4788999999999998754
No 201
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.41 E-value=4.7e-13 Score=111.39 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-C---CCCCccEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-F---PTDYADRY 179 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~---~~~~~D~i 179 (290)
++.+|||||||+|..+..+++.+| +.+++++|+++.+++.|+++.. .++++++.+|+.+. + + ..++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 678999999999999999999987 7899999999999999987642 23589999998542 1 1 11569999
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
++... .+....+++.+.++|+|||.+++.+....
T Consensus 138 ~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 138 FIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 98755 33456899999999999999988766543
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.41 E-value=3.4e-13 Score=112.69 Aligned_cols=98 Identities=19% Similarity=0.297 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCC------CeEEEEeCCHHHHHHHhhhCC--------CCCceEEEcCCCCCCCCC-
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDA------KNVTILDQSPHQLAKAKQKEP--------LKECKIVEGDAEDLPFPT- 173 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~------~~v~~vD~s~~~~~~a~~~~~--------~~~v~~~~~d~~~l~~~~- 173 (290)
.++.+|||||||+|.++..+++..+. .+|+++|+++.+++.++++.. ..+++++.+|... ++++
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcC
Confidence 47889999999999999999986532 599999999999999987743 2478999999876 4443
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 174 DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++||+|++...++++. +++.+.|||||.+++...
T Consensus 162 ~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 6799999999988765 688999999999998754
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=5.6e-13 Score=117.71 Aligned_cols=103 Identities=18% Similarity=0.235 Sum_probs=83.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCCC--CCCCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAEDL--PFPTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~l--~~~~~~~D~i~ 180 (290)
++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|+++.. ..+++++.+|+.+. ..++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 5689999999999999999998777899999999999999998763 35799999998553 23456799999
Q ss_pred ecCccccc--CC--HHHHHHHHHhccCCCCEEEEEc
Q 022929 181 SAGSIEYW--PD--PQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 181 ~~~~l~~~--~~--~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
+....... .+ ...+++.+.++|+|||.+++..
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 86542111 11 3689999999999999999863
No 204
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.40 E-value=2e-12 Score=112.43 Aligned_cols=132 Identities=14% Similarity=0.022 Sum_probs=94.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCC-CCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAED-LPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~-l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++.. ..+++++.+|+.+ ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999988667899999999999999998762 3579999999754 2333567999998
Q ss_pred cCcccccC-----CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 182 AGSIEYWP-----DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 182 ~~~l~~~~-----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
...-.+.. ...++++++.++|+|||.+++...... . ... ...++.+.+++. |..+.....
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~-~-~~~----------~~~~~~~~l~~~-F~~v~~~~~ 234 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF-Y-DIG----------WFKLAYRRISKV-FPITRVYLG 234 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT-T-THH----------HHHHHHHHHHHH-CSEEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc-c-CHH----------HHHHHHHHHHHH-CCceEEEEe
Confidence 53321121 125799999999999999998743211 0 000 124555666666 766665543
No 205
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=106.29 Aligned_cols=98 Identities=21% Similarity=0.153 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCC---------CeEEEEeCCHHHHHHHhhhCCCCCceEE-EcCCCCCC--------
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDA---------KNVTILDQSPHQLAKAKQKEPLKECKIV-EGDAEDLP-------- 170 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~---------~~v~~vD~s~~~~~~a~~~~~~~~v~~~-~~d~~~l~-------- 170 (290)
.++.+|||+|||+|.++..+++..+. .+++++|+|+.. ...+++++ .+|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------PLEGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------CCTTCEEECSCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------cCCCCeEEEeccCCCHHHHHHHHHh
Confidence 47899999999999999999998754 799999999831 12467888 88886543
Q ss_pred CCCCCccEEEecCccccc----CCH-------HHHHHHHHhccCCCCEEEEEccC
Q 022929 171 FPTDYADRYVSAGSIEYW----PDP-------QRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+++++||+|++...++.. .+. ..+++++.++|+|||.+++....
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 334579999996654432 222 47899999999999999987653
No 206
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.40 E-value=1.2e-13 Score=130.74 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=86.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---CCceEEEcCCCCC--CCCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---KECKIVEGDAEDL--PFPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~v~~~~~d~~~l--~~~~~~~D~i~~~~~ 184 (290)
++.+|||||||.|.++..+++. +..|+|+|+|+.+++.|+..+.. .+++|.+++++++ ++.+++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5689999999999999999998 89999999999999999876432 3589999999876 456678999999999
Q ss_pred ccccCCHHH--HHHHHHhccCCCCEEEEEccCC
Q 022929 185 IEYWPDPQR--GIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 185 l~~~~~~~~--~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
++|++++.. .+..+.+.|+++|..++.....
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999998763 3456777788888777665443
No 207
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=9.3e-13 Score=113.25 Aligned_cols=102 Identities=23% Similarity=0.273 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
.++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|+++.. ..++.++.+|+.+.+. .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 37899999999999999999998766799999999999999998743 2468899999987643 5679999987654
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+...++..+.+.|+|||.+++.+...
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 55678999999999999999876543
No 208
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=9.2e-13 Score=114.81 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=83.5
Q ss_pred CEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---CCceEEEcCCCCC--CCCCCCccEEEecCccc
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---KECKIVEGDAEDL--PFPTDYADRYVSAGSIE 186 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~v~~~~~d~~~l--~~~~~~~D~i~~~~~l~ 186 (290)
.+|||||||+|.++..+++.+|+.+++++|+++.+++.|++++.. .+++++.+|..+. .+++++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 499999999999999999988889999999999999999998753 4799999998653 24456799999864333
Q ss_pred ccCC----HHHHHHHHHhccCCCCEEEEEcc
Q 022929 187 YWPD----PQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 187 ~~~~----~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.... ...+++.+.++|+|||.+++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2211 25799999999999999988654
No 209
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=1.7e-11 Score=100.65 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=93.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC--CceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++.... +++++.+|+.+++ .+||+|+++..++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 6789999999999999999887 3458999999999999999886533 6899999998864 36999999887766
Q ss_pred cC--CHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 188 WP--DPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 188 ~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.. ....+++.+.+++ |+ +++....... +.+.+.+.+++.||++..+...
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~-~~~~~~~~~~---------------~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DV-VYSIHLAKPE---------------VRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SE-EEEEEECCHH---------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--Cc-EEEEEeCCcC---------------CHHHHHHHHHHCCCeEEEEEEE
Confidence 64 2357888888888 44 4443311110 2355677889999987766554
No 210
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.38 E-value=1.5e-12 Score=109.10 Aligned_cols=135 Identities=9% Similarity=-0.027 Sum_probs=100.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
+..+|||||||+|-++..++...|..+|+++|+++.+++.+++++.. .+..+...|+..-+ +..+||++++.-++++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 57899999999999999999988899999999999999999988543 34677888886644 4456999999999999
Q ss_pred cCCHH--HHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 188 WPDPQ--RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 188 ~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
+.+.+ ..+ ++.+.|+++|.++-... ..-..-...+...+ .+.|.+.+.+.|+.+.+.+
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~-ksl~Grs~gm~~~Y-----~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPT-KSLGQRSKGMFQNY-----SQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEEC-C-------CHHHHH-----HHHHHHHHHHHTCCEEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccc-hhhcCCCcchhhHH-----HHHHHHHHHhcCCceeeee
Confidence 97653 355 89999999998865443 11001111122222 4678899999999554444
No 211
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.37 E-value=5.6e-13 Score=111.00 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-CC----CCCccE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-FP----TDYADR 178 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~~----~~~~D~ 178 (290)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++.. .++++++.+|+.+. + +. .++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 678999999999999999999877 7899999999999999987742 24589999998442 1 11 157999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 144 v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 144 IYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 996543 34567899999999999999998776543
No 212
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=2.2e-12 Score=105.10 Aligned_cols=121 Identities=17% Similarity=0.209 Sum_probs=86.5
Q ss_pred CCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC--------C---CC
Q 022929 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF--------P---TD 174 (290)
Q Consensus 106 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~--------~---~~ 174 (290)
...+++.+|||+|||+|.++..+++. +.+|+|+|+++.. ...+++++++|+.+.+. . .+
T Consensus 21 ~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------EIAGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp CCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------cCCCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 33447899999999999999999988 7899999998641 23579999999987542 1 03
Q ss_pred CccEEEecCcccccCC-----------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHH
Q 022929 175 YADRYVSAGSIEYWPD-----------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQK 243 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 243 (290)
+||+|++......... .+.+++.+.++|||||.+++....... ..++...++.
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~----------------~~~~~~~l~~ 154 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM----------------TNDFIAIWRK 154 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH----------------HHHHHHHHGG
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC----------------HHHHHHHHHH
Confidence 7999999654322211 136788899999999999886543321 2455566654
Q ss_pred CCCcEEEEEE
Q 022929 244 AGFKDVQLKR 253 (290)
Q Consensus 244 aGf~~v~~~~ 253 (290)
.|..+++.+
T Consensus 155 -~F~~v~~~k 163 (191)
T 3dou_A 155 -NFSSYKISK 163 (191)
T ss_dssp -GEEEEEEEC
T ss_pred -hcCEEEEEC
Confidence 587665544
No 213
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.37 E-value=6.6e-12 Score=115.45 Aligned_cols=130 Identities=21% Similarity=0.229 Sum_probs=99.4
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCC--CCCCCccEEEe-
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLP--FPTDYADRYVS- 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~--~~~~~~D~i~~- 181 (290)
.++.+|||+|||+|..+..+++..++ .+++++|+++.+++.++++. ...+++++++|+.+++ +++++||+|++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 37889999999999999999998766 89999999999999998773 3347899999998765 55467999996
Q ss_pred -----cCcccccCCH----------------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHH
Q 022929 182 -----AGSIEYWPDP----------------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEW 240 (290)
Q Consensus 182 -----~~~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (290)
..++.+.++. ..+++++.++|||||.+++.++..... .+.+.+..+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~-------------ene~~v~~~ 404 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE-------------ENEKNIRWF 404 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-------------GTHHHHHHH
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh-------------hHHHHHHHH
Confidence 2344444442 468999999999999999987754321 033456667
Q ss_pred HHHC-CCcEEEE
Q 022929 241 FQKA-GFKDVQL 251 (290)
Q Consensus 241 l~~a-Gf~~v~~ 251 (290)
+++. ||+.+.+
T Consensus 405 l~~~~~~~~~~~ 416 (450)
T 2yxl_A 405 LNVHPEFKLVPL 416 (450)
T ss_dssp HHHCSSCEECCC
T ss_pred HHhCCCCEEeec
Confidence 7775 7876543
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.36 E-value=7.9e-13 Score=115.99 Aligned_cols=132 Identities=20% Similarity=0.144 Sum_probs=96.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--------CCCceEEEcCCCC-CCCCCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------LKECKIVEGDAED-LPFPTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~v~~~~~d~~~-l~~~~~~~D~i~ 180 (290)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|+++.. ..+++++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 5689999999999999999998667899999999999999998753 3579999999865 233456799999
Q ss_pred ecCcccc---cCC----HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 181 SAGSIEY---WPD----PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 181 ~~~~l~~---~~~----~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
+....+. .+. ...+++++.++|+|||.+++......... ......+.+.+++. |..+....
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-----------~~~~~~~~~~l~~~-F~~v~~~~ 224 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTH-----------HRVHPVVHRTVREA-FRYVRSYK 224 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC--------------CHHHHHHHHHHTT-CSEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccC-----------HHHHHHHHHHHHHH-CCceEEEE
Confidence 9765543 111 25899999999999999988632211000 01234556667766 66555543
No 215
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.35 E-value=7.3e-13 Score=112.29 Aligned_cols=103 Identities=12% Similarity=0.096 Sum_probs=84.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-C-----CCCCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-F-----PTDYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~-----~~~~~D 177 (290)
++.+|||||||+|..+..+++..| +.+++++|+|+.+++.|+++.. ..+++++.+|..+. + + ..++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 568999999999999999999877 7899999999999999997642 24688999998542 2 1 146799
Q ss_pred EEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 159 ~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 159 FIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp EEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 9998643 3467789999999999999998865443
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.35 E-value=7.1e-13 Score=116.11 Aligned_cols=103 Identities=22% Similarity=0.193 Sum_probs=80.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCC-CCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAED-LPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~-l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|+++.. ..+++++.+|+.+ ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 5689999999999999999988777899999999999999998864 3468999999854 2234567999998
Q ss_pred cCcccccCCH----HHHHHHHHhccCCCCEEEEEc
Q 022929 182 AGSIEYWPDP----QRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 182 ~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~ 212 (290)
....+..+.. ..+++++.++|+|||.+++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 6532221221 578999999999999999875
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.35 E-value=1.1e-12 Score=113.32 Aligned_cols=104 Identities=21% Similarity=0.154 Sum_probs=83.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCCC-CCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAEDL-PFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~l-~~~~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|+++.. .++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 5689999999999999999988667899999999999999998864 35789999998552 222567999998
Q ss_pred cCcccccCCH----HHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDP----QRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.......+.. ..+++.+.++|+|||.+++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5443322221 5899999999999999988743
No 218
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.34 E-value=2.1e-13 Score=115.26 Aligned_cols=103 Identities=17% Similarity=0.073 Sum_probs=83.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-CCC-----CCCccE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-PFP-----TDYADR 178 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~~~-----~~~~D~ 178 (290)
++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++.. ..+++++.+|+.+. +.. .++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 578999999999999999999875 7899999999999888877632 24799999998553 211 367999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
|++... ..+...+++++.++|+|||.+++.+...
T Consensus 140 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 140 IFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 998654 3456678999999999999999976654
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=9.3e-13 Score=114.96 Aligned_cols=103 Identities=21% Similarity=0.231 Sum_probs=81.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCC-CCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAED-LPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~-l~~~~~~~D~i~~ 181 (290)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|+++.. ..+++++.+|..+ ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999988667899999999999999998753 3578999999854 2334567999998
Q ss_pred cCcccccCC----HHHHHHHHHhccCCCCEEEEEc
Q 022929 182 AGSIEYWPD----PQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 182 ~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
....+..+. ...+++++.++|+|||.+++..
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 654322211 2468999999999999998865
No 220
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=9.9e-13 Score=113.13 Aligned_cols=99 Identities=18% Similarity=0.101 Sum_probs=75.3
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-----CCceEE--EcCCCCCCCCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECKIV--EGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~v~~~--~~d~~~l~~~~~~~D~i~~ 181 (290)
.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... .++.++ ++|+.+++ +++||+|+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 47889999999999999999887 5899999998 54333322111 168899 88998866 567999999
Q ss_pred cCcccccCCHH-------HHHHHHHhccCCCC--EEEEEccC
Q 022929 182 AGSIEYWPDPQ-------RGIREAYRVLKLGG--KACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~-------~~l~~~~~~L~pgG--~l~i~~~~ 214 (290)
..+ ++..++. .+++.+.++|+||| .+++....
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 877 5444421 37889999999999 88886544
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=1.2e-12 Score=112.02 Aligned_cols=100 Identities=13% Similarity=-0.006 Sum_probs=75.5
Q ss_pred CCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-----CCceEE--EcCCCCCCCCCCCccEEE
Q 022929 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECKIV--EGDAEDLPFPTDYADRYV 180 (290)
Q Consensus 108 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~v~~~--~~d~~~l~~~~~~~D~i~ 180 (290)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .++.++ ++|+.+++ +++||+|+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 347899999999999999999887 5899999998 43333222111 168889 89998876 56799999
Q ss_pred ecCcccccCCHH-------HHHHHHHhccCCCC--EEEEEccC
Q 022929 181 SAGSIEYWPDPQ-------RGIREAYRVLKLGG--KACIIGPV 214 (290)
Q Consensus 181 ~~~~l~~~~~~~-------~~l~~~~~~L~pgG--~l~i~~~~ 214 (290)
|..+ ++..++. .+++.+.++|+||| .+++....
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9877 5444431 37889999999999 88886544
No 222
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.33 E-value=2.1e-12 Score=111.19 Aligned_cols=106 Identities=11% Similarity=0.075 Sum_probs=83.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCC----CCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPF----PTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~----~~~~~D~i~~ 181 (290)
++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++. ...+++++.+|+.+++. ..++||+|++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEE
Confidence 7889999999999999999997665 89999999999999998773 23478999999876543 2457999998
Q ss_pred c------Cccc------------ccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 182 A------GSIE------------YWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 182 ~------~~l~------------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
. .++. ......++++++.++|||||.+++.++..
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 5 2221 11344689999999999999999987654
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.32 E-value=1.3e-12 Score=109.59 Aligned_cols=103 Identities=18% Similarity=0.177 Sum_probs=83.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCC----CCCCC--CCccE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAED----LPFPT--DYADR 178 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~----l~~~~--~~~D~ 178 (290)
++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++.. ..+++++.+|+.+ ++..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 568999999999999999999876 6899999999999999987642 2468899998743 22222 57999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
|++... ..+...+++++.++|+|||.+++.+...
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 998754 3456789999999999999999876554
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.32 E-value=1.9e-12 Score=111.75 Aligned_cols=101 Identities=19% Similarity=0.223 Sum_probs=80.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-------------CCCCceEEEcCCCCC-CCCCCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------------PLKECKIVEGDAEDL-PFPTDY 175 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------~~~~v~~~~~d~~~l-~~~~~~ 175 (290)
++.+|||||||+|.++..+++. +..+++++|+++.+++.|+++. ...+++++.+|..+. +. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 5689999999999999999998 7789999999999999999886 235689999997542 22 457
Q ss_pred ccEEEecCcccccC--C--HHHHHHHHHhccCCCCEEEEEc
Q 022929 176 ADRYVSAGSIEYWP--D--PQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 176 ~D~i~~~~~l~~~~--~--~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
||+|++....+..+ . ...+++.+.++|+|||.+++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999865432211 1 2578999999999999998864
No 225
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.32 E-value=2.6e-12 Score=109.71 Aligned_cols=93 Identities=15% Similarity=-0.026 Sum_probs=79.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-------CCCceEEEcCCCCCCCCCCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECKIVEGDAEDLPFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~v~~~~~d~~~l~~~~~~~D~i~~~ 182 (290)
.+.+|||||||+|..+..+++. + .+++++|+++.+++.|++++. .++++++.+|..+.. ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 5689999999999999999988 6 899999999999999998753 247899999987754 679999986
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.+++..+++.+.+.|+|||.+++..
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3456679999999999999998863
No 226
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.31 E-value=2.5e-12 Score=111.02 Aligned_cols=115 Identities=13% Similarity=0.036 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCcc------chhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCCCCCceE-EEcCCCCCCCCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT------GFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKI-VEGDAEDLPFPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~------G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~v~~-~~~d~~~l~~~~~~~D~i~ 180 (290)
+++.+|||+|||+ |. ..+++..+ +.+|+|+|+|+. + .++++ +++|+.++++. ++||+|+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~~v~~~i~gD~~~~~~~-~~fD~Vv 128 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------SDADSTLIGDCATVHTA-NKWDLII 128 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------CSSSEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------CCCEEEEECccccCCcc-CcccEEE
Confidence 3789999999944 66 44556655 589999999988 1 36889 99999887654 5699999
Q ss_pred ecCcccc--------c---CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEE
Q 022929 181 SAGSIEY--------W---PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 181 ~~~~l~~--------~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
++...+. . ...+.+++++.++|||||.+++...... ..+++.+++++.||..+
T Consensus 129 sn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------------~~~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 129 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------------WNADLYKLMGHFSWWTA 192 (290)
T ss_dssp ECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------------CCHHHHHHHTTEEEEEE
T ss_pred EcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------------CHHHHHHHHHHcCCcEE
Confidence 9643221 1 1124789999999999999998654322 23578889999999876
Q ss_pred EEE
Q 022929 250 QLK 252 (290)
Q Consensus 250 ~~~ 252 (290)
++.
T Consensus 193 ~~~ 195 (290)
T 2xyq_A 193 FVT 195 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 227
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.31 E-value=4e-12 Score=107.00 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=83.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC---C-CCceEEEcCCCCC-C-------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP---L-KECKIVEGDAEDL-P------------- 170 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~---~-~~v~~~~~d~~~l-~------------- 170 (290)
++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++.. . ++++++.+|+.+. +
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 678999999999999999999976 6899999999999999998742 2 3488999987441 1
Q ss_pred -CCC--CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 171 -FPT--DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 171 -~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+++ ++||+|++.... .+...+++++.++|+|||.+++.+...
T Consensus 140 ~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp TTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred cccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 222 679999987543 445688999999999999999876544
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.30 E-value=1.5e-11 Score=109.30 Aligned_cols=136 Identities=15% Similarity=0.209 Sum_probs=100.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCC-----CeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCCCCCCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDA-----KNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLPFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~-----~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~~~~~~~D~i~~~ 182 (290)
++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.+.. ..++.++++|.... ...++||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 5689999999999999999887543 789999999999999987632 12578999998663 345679999998
Q ss_pred CcccccCCHH------------------HHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHC
Q 022929 183 GSIEYWPDPQ------------------RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA 244 (290)
Q Consensus 183 ~~l~~~~~~~------------------~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 244 (290)
-.+.+++..+ .+++.+.+.|+|||.++++.+.. . . . -.....+.+.+.+.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~--~-~----~-----~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA--M-F----G-----TSDFAKVDKFIKKN 276 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG--G-G----G-----STTHHHHHHHHHHH
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch--h-c----C-----CchHHHHHHHHHhC
Confidence 7765554322 57999999999999998887532 1 0 0 01346788888888
Q ss_pred CCcEEEEEEcCcccc
Q 022929 245 GFKDVQLKRIGPKWY 259 (290)
Q Consensus 245 Gf~~v~~~~~~~~~~ 259 (290)
|+ +..+..++....
T Consensus 277 ~~-~~~ii~lp~~~F 290 (344)
T 2f8l_A 277 GH-IEGIIKLPETLF 290 (344)
T ss_dssp EE-EEEEEECCGGGS
T ss_pred Ce-EEEeeeCChhhc
Confidence 87 344555655433
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=5.1e-12 Score=109.35 Aligned_cols=86 Identities=22% Similarity=0.351 Sum_probs=69.5
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLP 170 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~ 170 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++.+|+.+++
T Consensus 14 ~~i~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 14 PLIINSIIDKAALR-PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD 90 (285)
T ss_dssp HHHHHHHHHHTCCC-TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCC-CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc
Confidence 34555666655543 7889999999999999999998 57999999999999999987532 46899999998876
Q ss_pred CCCCCccEEEecCcc
Q 022929 171 FPTDYADRYVSAGSI 185 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l 185 (290)
++ +||+|+++...
T Consensus 91 ~~--~fD~vv~nlpy 103 (285)
T 1zq9_A 91 LP--FFDTCVANLPY 103 (285)
T ss_dssp CC--CCSEEEEECCG
T ss_pred ch--hhcEEEEecCc
Confidence 65 59999996443
No 230
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.29 E-value=1.8e-11 Score=105.00 Aligned_cols=127 Identities=19% Similarity=0.163 Sum_probs=95.4
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGS 184 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~ 184 (290)
+++.+|||+|||+|.+++.+++. +..+|+++|+|+.+++.+++|.. .++++++++|..+++. .+.||.|++...
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 37899999999999999999987 35799999999999999998743 3458899999988764 456999997633
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+....++..+.++|++||.+.+-+....... .-...+.+.++.++.|+++..+
T Consensus 202 ----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~----------~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM----------PREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT----------TTTTHHHHHHHHHHTTCEEEEE
T ss_pred ----CcHHHHHHHHHHHcCCCCEEEEEeeeccccc----------chhHHHHHHHHHHHcCCcEEEE
Confidence 2345678888999999999866433221100 0113467788899999976443
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.29 E-value=3.4e-12 Score=106.51 Aligned_cols=103 Identities=12% Similarity=0.113 Sum_probs=83.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-CC--C--CCccE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-FP--T--DYADR 178 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~~--~--~~~D~ 178 (290)
++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++.. ..+++++.+|+.+. + +. . ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 678999999999999999999876 6899999999999999987732 24789999988542 1 11 1 56999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
|++... ..+...+++++.++|+|||.+++.+...
T Consensus 149 v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 149 AVVDAD---KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEECSC---STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 998654 3456789999999999999999876543
No 232
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.28 E-value=2.5e-12 Score=115.91 Aligned_cols=137 Identities=14% Similarity=0.029 Sum_probs=96.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CC--CceEEEcCCCCC-C-C--CCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LK--ECKIVEGDAEDL-P-F--PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~--~v~~~~~d~~~l-~-~--~~~~~D~i~ 180 (290)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.|+++.. .. +++++++|+.+. + . ...+||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 6789999999999999999986 23589999999999999998743 22 789999998652 2 1 234799999
Q ss_pred ecCcc-----cccCC----HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 181 SAGSI-----EYWPD----PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 181 ~~~~l-----~~~~~----~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+.-.. ....+ ..++++.+.++|+|||.+++........ .. . -.+.+.+.+.++|.++++.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~~-~---------~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-VS-Q---------FKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HH-H---------HHHHHHHHHTTCCCEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HH-H---------HHHHHHHHHHHcCCcEEEe
Confidence 84322 12222 3457888899999999999886543221 00 0 0244566777889986655
Q ss_pred EEcCccc
Q 022929 252 KRIGPKW 258 (290)
Q Consensus 252 ~~~~~~~ 258 (290)
...++.+
T Consensus 360 ~~~~~D~ 366 (385)
T 2b78_A 360 QQLPSDF 366 (385)
T ss_dssp ECCCTTS
T ss_pred CCCCCCC
Confidence 5555443
No 233
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.27 E-value=5.1e-12 Score=106.38 Aligned_cols=103 Identities=15% Similarity=0.129 Sum_probs=83.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCC-C-C-----CCCCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDL-P-F-----PTDYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l-~-~-----~~~~~D 177 (290)
++.+|||||||+|..+..+++..| +.+++++|+++.+++.|+++.. .++++++.+|..+. + + ..++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 568999999999999999999876 6899999999999999987642 23588999998542 2 1 146799
Q ss_pred EEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 150 ~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 150 FGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred EEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 9998643 3456789999999999999998865443
No 234
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.26 E-value=6.6e-11 Score=108.24 Aligned_cols=137 Identities=19% Similarity=0.170 Sum_probs=97.0
Q ss_pred cHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCC--
Q 022929 94 TEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAED-- 168 (290)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~-- 168 (290)
++.+...+++.+... ++.+|||+|||+|.++..+++. ..+|+|+|+|+++++.|+++.. ..+++|+.+|+.+
T Consensus 271 ~e~l~~~~~~~l~~~-~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 271 NQKMVARALEWLDVQ-PEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHHHHhhcCC-CCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh
Confidence 445566666555432 6789999999999999999988 6899999999999999998742 2478999999976
Q ss_pred --CCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCC
Q 022929 169 --LPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 169 --l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 246 (290)
+++.+++||+|++.--.... ..+++.+.. ++|++.+++..... +...-...|.+.||
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p~-----------------tlard~~~l~~~Gy 406 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNPA-----------------TLARDSEALLKAGY 406 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCHH-----------------HHHHHHHHHHHTTC
T ss_pred hhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECChH-----------------HHHhhHHHHHHCCc
Confidence 23445679999985332211 245555543 78888888764211 11222356677899
Q ss_pred cEEEEEEc
Q 022929 247 KDVQLKRI 254 (290)
Q Consensus 247 ~~v~~~~~ 254 (290)
++.++..+
T Consensus 407 ~~~~~~~~ 414 (433)
T 1uwv_A 407 TIARLAML 414 (433)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 98876654
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=3.5e-12 Score=123.07 Aligned_cols=124 Identities=17% Similarity=0.161 Sum_probs=92.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-----CCceEEEcCCCC-CCCCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECKIVEGDAED-LPFPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~v~~~~~d~~~-l~~~~~~~D~i~~~~ 183 (290)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.|+++... .+++++++|+.+ ++...++||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 6889999999999999999885 345799999999999999987421 368899999866 333446799999853
Q ss_pred -----------cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 184 -----------SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 184 -----------~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+.....+...+++.+.++|+|||.+++........ .+ .+.+++.||+...+
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~-------------~~----~~~l~~~g~~~~~i 679 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR-------------MD----LDGLAKLGLKAQEI 679 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC-------------CC----HHHHHHTTEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc-------------cC----HHHHHHcCCceeee
Confidence 22333445678999999999999999876542110 01 35777889874444
No 236
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=1.6e-11 Score=110.73 Aligned_cols=132 Identities=15% Similarity=-0.027 Sum_probs=91.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCC--ceEEEcCCCCC-CCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CKIVEGDAEDL-PFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--v~~~~~d~~~l-~~~~~~~D~i~~~~~l~ 186 (290)
++.+|||+|||+|.++..++.. +..|+++|+|+.+++.|+++...++ ..+.++|+.+. +...+.||+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 5899999999999999999987 5669999999999999998854322 35678888653 11123499999863321
Q ss_pred c---------cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 187 Y---------WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 187 ~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
. ..+...+++.+.++|+|||.+++.++...... ..+ .+.+.+.+.++|.+...++..
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~-~~f----------~~~v~~a~~~~g~~~~i~~~~ 357 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRL-EDL----------LEVARRAAADLGRRLRVHRVT 357 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH-HHH----------HHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCH-HHH----------HHHHHHHHHHhCCeEEEEEEc
Confidence 1 12235788999999999999997765543210 000 134556677778765555444
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.23 E-value=4.6e-11 Score=99.25 Aligned_cols=136 Identities=13% Similarity=-0.053 Sum_probs=93.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||||||.|.++..+. +..+|+++|+++.+++.++++... .+..+...|....+.++ ++|+|++.-++|+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~ 180 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPL 180 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHH
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHH
Confidence 67899999999999999887 588999999999999999988532 45678889998767555 6999999999998
Q ss_pred cCCHH-HHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 188 WPDPQ-RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 188 ~~~~~-~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
+.+.+ ...-++...|+++|.++-. +...-..-...+...+ ...|++.+.+ .+.+++..+++.
T Consensus 181 LE~q~~~~~~~ll~aL~~~~vvVsf-Ptksl~Gr~~gm~~~Y-----~~~~e~~~~~-~~~~~~~~~~~n 243 (253)
T 3frh_A 181 LEREQAGSAMALLQSLNTPRMAVSF-PTRSLGGRGKGMEANY-----AAWFEGGLPA-EFEIEDKKTIGT 243 (253)
T ss_dssp HHHHSTTHHHHHHHHCBCSEEEEEE-ECC-----------CH-----HHHHHHHSCT-TEEEEEEEEETT
T ss_pred hhhhchhhHHHHHHHhcCCCEEEEc-ChHHhcCCCcchhhHH-----HHHHHHHhhc-cchhhhheecCc
Confidence 86543 2333888899998776544 3221111111111111 3556666644 455666666654
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.22 E-value=1.3e-11 Score=113.23 Aligned_cols=129 Identities=12% Similarity=0.105 Sum_probs=95.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC-CCCCCccEEEec--
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP-FPTDYADRYVSA-- 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~-~~~~~~D~i~~~-- 182 (290)
++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.++++.. .. +.++++|+.+++ ...++||+|++.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECCC
Confidence 7899999999999999999988754 799999999999999998743 23 788888886654 234679999962
Q ss_pred ----CcccccCCH----------------HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHH
Q 022929 183 ----GSIEYWPDP----------------QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQ 242 (290)
Q Consensus 183 ----~~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 242 (290)
.++...++. .++++++.++|||||.|+++++..... .+.+.+..+++
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e-------------Ene~vv~~~l~ 246 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE-------------ENEGVVAHFLK 246 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-------------GTHHHHHHHHH
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh-------------cCHHHHHHHHH
Confidence 222222221 568999999999999999987654321 03455666777
Q ss_pred HC-CCcEEEEE
Q 022929 243 KA-GFKDVQLK 252 (290)
Q Consensus 243 ~a-Gf~~v~~~ 252 (290)
+. +|+++.+.
T Consensus 247 ~~~~~~l~~~~ 257 (464)
T 3m6w_A 247 AHPEFRLEDAR 257 (464)
T ss_dssp HCTTEEEECCC
T ss_pred HCCCcEEEecc
Confidence 76 57766543
No 239
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.22 E-value=3.2e-11 Score=110.21 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCCC--CCCCCccEEEec--
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLP--FPTDYADRYVSA-- 182 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l~--~~~~~~D~i~~~-- 182 (290)
.++.+|||+|||+|..+..+++..++.+++++|+++.+++.++++... .+++++.+|+.+++ +++++||+|++.
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 478899999999999999999997768999999999999999877432 24788999998765 455679999962
Q ss_pred ----CcccccCCH----------------HHHHHHHHhccCCCCEEEEEccCC
Q 022929 183 ----GSIEYWPDP----------------QRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 183 ----~~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
.++.+.++. ..+++++.++|||||.+++.++..
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 334444442 378999999999999999987654
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.22 E-value=6e-11 Score=109.54 Aligned_cols=106 Identities=16% Similarity=0.177 Sum_probs=83.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCC-CCCCccEEEec--
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPF-PTDYADRYVSA-- 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~-~~~~~D~i~~~-- 182 (290)
++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.++++.. ..+++++++|+..++. ..++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 688999999999999999999864 4799999999999999988743 3478899999987653 34579999972
Q ss_pred ----CcccccCC----------------HHHHHHHHHhccCCCCEEEEEccCC
Q 022929 183 ----GSIEYWPD----------------PQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 183 ----~~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
.++...++ ..++++++.++|||||.|+++++..
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 22222222 1368999999999999999987654
No 241
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.22 E-value=1e-11 Score=108.29 Aligned_cols=105 Identities=17% Similarity=0.090 Sum_probs=74.2
Q ss_pred CCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeC----CHHHHHHHh-hhCCCCCceEEEc-CCCCCCCCCCCccEE
Q 022929 106 DLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQ----SPHQLAKAK-QKEPLKECKIVEG-DAEDLPFPTDYADRY 179 (290)
Q Consensus 106 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~----s~~~~~~a~-~~~~~~~v~~~~~-d~~~l~~~~~~~D~i 179 (290)
...+++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. +....+++.++++ |+..++ ..+||+|
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V 152 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTL 152 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEE
Confidence 33347899999999999999999887 48999999 554332111 1111246888888 887765 4579999
Q ss_pred EecCccc---ccCCHH---HHHHHHHhccCCCCEEEEEccCC
Q 022929 180 VSAGSIE---YWPDPQ---RGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 180 ~~~~~l~---~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+|....+ +..+.. .+++.+.++|||||.+++.....
T Consensus 153 ~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 153 LCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9976653 222222 47888999999999988865433
No 242
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.21 E-value=2.8e-11 Score=109.47 Aligned_cols=132 Identities=17% Similarity=0.021 Sum_probs=95.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---C-C-CceEEEcCCCCCCC----CCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---L-K-ECKIVEGDAEDLPF----PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~-~-~v~~~~~d~~~l~~----~~~~~D~i~ 180 (290)
++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|+++.. . . +++++.+|+.+... ...+||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 67899999999999999999872 4699999999999999998743 2 2 68899999865421 135699999
Q ss_pred ecCc---------ccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 181 SAGS---------IEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 181 ~~~~---------l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
+.-- .........++.++.+.|+|||.+++.+...... .. . ..+.+.+.+.++|++...+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~-~---------~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-SD-L---------FQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-HH-H---------HHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HH-H---------HHHHHHHHHHHcCCeEEEE
Confidence 8532 2222445689999999999999999876543221 00 0 0234556777888655444
Q ss_pred EE
Q 022929 252 KR 253 (290)
Q Consensus 252 ~~ 253 (290)
+.
T Consensus 368 ~~ 369 (396)
T 3c0k_A 368 EQ 369 (396)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=2.4e-11 Score=109.44 Aligned_cols=132 Identities=19% Similarity=0.058 Sum_probs=94.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCCC----CCCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLPF----PTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~~----~~~~~D~i~~~ 182 (290)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|+++.. ..+++++++|+.+... .+.+||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5689999999999999999998 6799999999999999998743 2348999999865421 14579999984
Q ss_pred Ccccc---------cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 183 GSIEY---------WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 183 ~~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
--... ..+...++..+.++|+|||.+++.+....... . . -.+.+.+.+.++|.....+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~-~---------~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTE-P-L---------FYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH-H-H---------HHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCH-H-H---------HHHHHHHHHHHcCCeEEEEEc
Confidence 32211 12345789999999999999999876432210 0 0 023455677788865544444
Q ss_pred c
Q 022929 254 I 254 (290)
Q Consensus 254 ~ 254 (290)
.
T Consensus 356 ~ 356 (382)
T 1wxx_A 356 R 356 (382)
T ss_dssp E
T ss_pred C
Confidence 3
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.20 E-value=5.1e-11 Score=105.45 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=89.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
++.+|||+|||+|.++.. ++ +..+|+++|+|+.+++.++++.. ..+++++++|+.+.. ++||+|++....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 788999999999999999 77 37899999999999999998743 246899999998765 669999985321
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHC-CCcEEEEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKA-GFKDVQLKR 253 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a-Gf~~v~~~~ 253 (290)
....+++.+.++|+|||.+++.+.... .+.+.+.++++ |+++..+..
T Consensus 269 ----~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------~~~~~~~l~~~~~~~i~~~~~ 316 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEEGGVIHYYTIGKD-----------------FDKAIKLFEKKCDCEVLEKRI 316 (336)
T ss_dssp ----TGGGGHHHHHHHEEEEEEEEEEEEESS-----------------SHHHHHHHHHHSEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEEEeecC-----------------chHHHHHHHHhcCCcEEEEEE
Confidence 123688999999999999988765543 12344455555 777655444
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.20 E-value=1.3e-11 Score=112.87 Aligned_cols=131 Identities=12% Similarity=0.101 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC-CCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP-FPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~-~~~~~~D~i~~~~ 183 (290)
.++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.++++.. ..++.+++.|..+++ ..+++||+|++.-
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 37899999999999999999987543 799999999999999988743 346888888886653 2345799999732
Q ss_pred ------cccccCC----------------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHH
Q 022929 184 ------SIEYWPD----------------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWF 241 (290)
Q Consensus 184 ------~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 241 (290)
++..-++ ..++++++.++|||||.|+.+++..... -+.+.+..++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e-------------Ene~vv~~~l 250 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE-------------ENEEIISWLV 250 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG-------------GTHHHHHHHH
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc-------------cCHHHHHHHH
Confidence 1211111 1268999999999999999987655321 1456677888
Q ss_pred HHCCCcEEEEE
Q 022929 242 QKAGFKDVQLK 252 (290)
Q Consensus 242 ~~aGf~~v~~~ 252 (290)
++.||+++.+.
T Consensus 251 ~~~~~~l~~~~ 261 (456)
T 3m4x_A 251 ENYPVTIEEIP 261 (456)
T ss_dssp HHSSEEEECCC
T ss_pred HhCCCEEEecc
Confidence 88887766654
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.18 E-value=8.3e-12 Score=112.98 Aligned_cols=105 Identities=20% Similarity=0.066 Sum_probs=82.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---C-CceEEEcCCCCCCC----CCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---K-ECKIVEGDAEDLPF----PTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~-~v~~~~~d~~~l~~----~~~~~D~i~~ 181 (290)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+++... . +++++.+|+.+... ...+||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6789999999999999999987 346999999999999999987532 2 68899999865421 2457999998
Q ss_pred cCcccc---------cCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 182 AGSIEY---------WPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 182 ~~~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
.-.... ..+...++.++.++|+|||.+++.++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 532211 1334578899999999999998887654
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.17 E-value=2.5e-11 Score=102.61 Aligned_cols=84 Identities=17% Similarity=0.272 Sum_probs=66.7
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPT 173 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~ 173 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.++++++
T Consensus 16 ~~~~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 16 KHNIDKIMTNIRLN-EHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHHTTCCCC-TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHHhCCCC-CCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCccc
Confidence 44556666666543 7889999999999999999998 58999999999999999988643 57999999998887764
Q ss_pred -CCccEEEec
Q 022929 174 -DYADRYVSA 182 (290)
Q Consensus 174 -~~~D~i~~~ 182 (290)
..| .|+++
T Consensus 93 ~~~~-~vv~n 101 (244)
T 1qam_A 93 NQSY-KIFGN 101 (244)
T ss_dssp SCCC-EEEEE
T ss_pred CCCe-EEEEe
Confidence 334 44544
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.14 E-value=1.4e-10 Score=105.52 Aligned_cols=130 Identities=15% Similarity=0.031 Sum_probs=92.0
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDY 175 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~ 175 (290)
+.+.+++.+.. .++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .+++++++|+.+... .++
T Consensus 27 l~~~~~~~~~~-~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~~~~~~~~D~~~~~~-~~~ 98 (421)
T 2ih2_A 27 VVDFMVSLAEA-PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------PWAEGILADFLLWEP-GEA 98 (421)
T ss_dssp HHHHHHHHCCC-CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------TTEEEEESCGGGCCC-SSC
T ss_pred HHHHHHHhhcc-CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------CCCcEEeCChhhcCc-cCC
Confidence 34444444432 256799999999999999999875 468999999999998766 468899999977543 457
Q ss_pred ccEEEecCcccc----------cCC-------------------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHH
Q 022929 176 ADRYVSAGSIEY----------WPD-------------------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFAD 226 (290)
Q Consensus 176 ~D~i~~~~~l~~----------~~~-------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 226 (290)
||+|+++--... +++ ...+++.+.++|+|||.++++.+..-. .
T Consensus 99 fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l-------~- 170 (421)
T 2ih2_A 99 FDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWL-------V- 170 (421)
T ss_dssp EEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGG-------T-
T ss_pred CCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHh-------c-
Confidence 999999522211 111 125688999999999999988654210 0
Q ss_pred HhhcCCCHHHHHHHHHHCCC
Q 022929 227 VWMLFPKEEEYIEWFQKAGF 246 (290)
Q Consensus 227 ~~~~~~~~~~~~~ll~~aGf 246 (290)
-...+.+++.+.+.|+
T Consensus 171 ----~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 171 ----LEDFALLREFLAREGK 186 (421)
T ss_dssp ----CGGGHHHHHHHHHHSE
T ss_pred ----CccHHHHHHHHHhcCC
Confidence 0023678888888887
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=7.9e-10 Score=100.66 Aligned_cols=96 Identities=13% Similarity=0.095 Sum_probs=75.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCC--ceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|+++...++ ++|+.+|+.++.. . +||+|++.-....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPRAG 365 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTTC
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCccc
Confidence 6789999999999999999987 6799999999999999998753222 8899999988643 2 6999998543211
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
....+++.+. .|+|+|.+++..
T Consensus 366 --~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 --LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp --SCHHHHHHHH-HHCCSEEEEEES
T ss_pred --hHHHHHHHHH-hcCCCcEEEEEC
Confidence 1234666654 489999998875
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.11 E-value=1.7e-10 Score=100.35 Aligned_cols=86 Identities=23% Similarity=0.356 Sum_probs=64.6
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFP 172 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~ 172 (290)
.+...+++.+... ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...+++++.+|+.+++++
T Consensus 29 ~i~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIK-SSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHHHHHHCCC-TTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred HHHHHHHHhcCCC-CcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 3445555555443 7889999999999999999987 679999999999999998764 235789999999887654
Q ss_pred CCCccEEEecCccc
Q 022929 173 TDYADRYVSAGSIE 186 (290)
Q Consensus 173 ~~~~D~i~~~~~l~ 186 (290)
+||+|+++...+
T Consensus 106 --~~D~Vv~n~py~ 117 (299)
T 2h1r_A 106 --KFDVCTANIPYK 117 (299)
T ss_dssp --CCSEEEEECCGG
T ss_pred --cCCEEEEcCCcc
Confidence 699999865443
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.09 E-value=6.2e-13 Score=112.55 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=78.8
Q ss_pred HhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCCCCC-CCc
Q 022929 99 DDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFPT-DYA 176 (290)
Q Consensus 99 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~~~~-~~~ 176 (290)
..+++.+.. .++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++.. ..+++++++|+.+++++. ++|
T Consensus 19 ~~i~~~~~~-~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 19 NQIIKQLNL-KETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HHHHHHCCC-CSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE
T ss_pred HHHHHhcCC-CCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc
Confidence 344444443 26789999999999999999998 5899999999999999987754 346899999999887763 568
Q ss_pred cEEEecCcc-----------cccCCHHHHH----HHHHhccCCCCEEEEE
Q 022929 177 DRYVSAGSI-----------EYWPDPQRGI----REAYRVLKLGGKACII 211 (290)
Q Consensus 177 D~i~~~~~l-----------~~~~~~~~~l----~~~~~~L~pgG~l~i~ 211 (290)
.|+++--. .|.......+ +.+.++|+|||.+.+.
T Consensus 96 -~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 96 -KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp -EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred -EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 56654221 1122222334 6688888888877654
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.09 E-value=1.9e-10 Score=99.62 Aligned_cols=88 Identities=22% Similarity=0.320 Sum_probs=72.8
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~~~~ 173 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +.+|+++|+++.+++.++++.. ..+++++++|+.++++++
T Consensus 36 ~~i~~~Iv~~l~~~-~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 36 KNFVNKAVESANLT-KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNK 112 (295)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGG
T ss_pred HHHHHHHHHhcCCC-CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCccc
Confidence 34555666665553 7889999999999999999998 6899999999999999988752 357999999999888777
Q ss_pred CCccEEEecCcc
Q 022929 174 DYADRYVSAGSI 185 (290)
Q Consensus 174 ~~~D~i~~~~~l 185 (290)
.+||+|+++...
T Consensus 113 ~~fD~Iv~NlPy 124 (295)
T 3gru_A 113 LDFNKVVANLPY 124 (295)
T ss_dssp SCCSEEEEECCG
T ss_pred CCccEEEEeCcc
Confidence 779999977444
No 253
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.05 E-value=2.1e-09 Score=95.90 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=101.9
Q ss_pred CCEEEEEcCccchhHHHHHhh-----------------CCCCeEEEEeCC-----------HHHHHHHhhhCC-CCCceE
Q 022929 111 NMLVVDVGGGTGFTTLGIVKH-----------------VDAKNVTILDQS-----------PHQLAKAKQKEP-LKECKI 161 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~-----------------~~~~~v~~vD~s-----------~~~~~~a~~~~~-~~~v~~ 161 (290)
..+|+|+||++|..+..+... .|..+|+..|+- +...+.+++... ..+.-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999988877654 356889999997 444444433322 123355
Q ss_pred EEcCCC---CCCCCCCCccEEEecCcccccCCHH---------------------------------------HHHHHHH
Q 022929 162 VEGDAE---DLPFPTDYADRYVSAGSIEYWPDPQ---------------------------------------RGIREAY 199 (290)
Q Consensus 162 ~~~d~~---~l~~~~~~~D~i~~~~~l~~~~~~~---------------------------------------~~l~~~~ 199 (290)
+.+... .-.++++++|+|+++.++||+++.. .+|+...
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555443 3458899999999999999986532 1266668
Q ss_pred hccCCCCEEEEEccCCCch--------hHhhhhHHH----------------hhcCCCHHHHHHHHHHCC-CcEEEEEEc
Q 022929 200 RVLKLGGKACIIGPVYPTF--------WLSRYFADV----------------WMLFPKEEEYIEWFQKAG-FKDVQLKRI 254 (290)
Q Consensus 200 ~~L~pgG~l~i~~~~~~~~--------~~~~~~~~~----------------~~~~~~~~~~~~ll~~aG-f~~v~~~~~ 254 (290)
+.|+|||.+++.....+.. .....+..+ -..+++.+++..+++++| |++.+++.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~ 292 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETF 292 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 9999999999987665443 222222211 123478999999999985 898888776
Q ss_pred Cccc
Q 022929 255 GPKW 258 (290)
Q Consensus 255 ~~~~ 258 (290)
...|
T Consensus 293 ~~~~ 296 (384)
T 2efj_A 293 NAPY 296 (384)
T ss_dssp EEET
T ss_pred eecc
Confidence 5444
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=9.6e-10 Score=99.09 Aligned_cols=121 Identities=13% Similarity=-0.025 Sum_probs=88.4
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCC-------------------------------------
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA------------------------------------- 134 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~------------------------------------- 134 (290)
+..+.++..++...... ++..|||++||+|.+++.++....+
T Consensus 184 pl~e~lAa~ll~l~~~~-~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWH-PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp SCCHHHHHHHHHHSCCC-TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCcHHHHHHHHHHhCCC-CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 45667777777666553 6789999999999999988865322
Q ss_pred -CeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCccc-cc---CCHHHHHHHHHhccCC-
Q 022929 135 -KNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSIE-YW---PDPQRGIREAYRVLKL- 204 (290)
Q Consensus 135 -~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~-~~---~~~~~~l~~~~~~L~p- 204 (290)
.+++|+|+|+.+++.|+++.. ..++++.++|+.+++.+. +||+|+++--.. .+ .+...+.+.+.+.|++
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 469999999999999998743 235899999998877654 699999973322 11 1223456666666665
Q ss_pred -CCEEEEEccC
Q 022929 205 -GGKACIIGPV 214 (290)
Q Consensus 205 -gG~l~i~~~~ 214 (290)
||.+++.+..
T Consensus 342 ~g~~~~iit~~ 352 (393)
T 3k0b_A 342 PTWSVYVLTSY 352 (393)
T ss_dssp TTCEEEEEECC
T ss_pred CCCEEEEEECC
Confidence 8998887653
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.03 E-value=1.1e-09 Score=96.71 Aligned_cols=104 Identities=21% Similarity=0.149 Sum_probs=78.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-----------CCceEEEcCCCCCCC----CCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----------KECKIVEGDAEDLPF----PTD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~~v~~~~~d~~~l~~----~~~ 174 (290)
++.+||+||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .+++++.+|..+.-- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 67899999999999999999875 48999999999999999998642 158899999865321 246
Q ss_pred CccEEEecCcc-ccc--C---CHHHHHHHH----HhccCCCCEEEEEccC
Q 022929 175 YADRYVSAGSI-EYW--P---DPQRGIREA----YRVLKLGGKACIIGPV 214 (290)
Q Consensus 175 ~~D~i~~~~~l-~~~--~---~~~~~l~~~----~~~L~pgG~l~i~~~~ 214 (290)
+||+|++...- ..- + -...+++.+ .++|+|||.+++....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 79999986432 111 1 113555655 8999999999887543
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.02 E-value=1.7e-09 Score=97.05 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=90.6
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCC------------------------------------
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA------------------------------------ 134 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~------------------------------------ 134 (290)
.+..+.++..++...... ++..|||.+||+|.+++.++....+
T Consensus 176 Apl~e~LAaall~l~~~~-~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 254 (384)
T 3ldg_A 176 APIKENMAAAIILLSNWF-PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYD 254 (384)
T ss_dssp CCCCHHHHHHHHHHTTCC-TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCCcHHHHHHHHHHhCCC-CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhcc
Confidence 345677777777766653 7789999999999999988865322
Q ss_pred --CeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCCCCCCCccEEEecCccc-ccC---CHHHHHHHHHhccCC
Q 022929 135 --KNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLPFPTDYADRYVSAGSIE-YWP---DPQRGIREAYRVLKL 204 (290)
Q Consensus 135 --~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~-~~~---~~~~~l~~~~~~L~p 204 (290)
.+++|+|+++.+++.|++|.. ...+++.++|+.+++.++ +||+|+++--.. .+. +...+.+.+.+.||+
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 469999999999999998743 235899999998877654 699999973322 122 234566777777776
Q ss_pred --CCEEEEEccC
Q 022929 205 --GGKACIIGPV 214 (290)
Q Consensus 205 --gG~l~i~~~~ 214 (290)
||.+++.+..
T Consensus 334 ~~g~~~~iit~~ 345 (384)
T 3ldg_A 334 LKTWSQFILTND 345 (384)
T ss_dssp CTTSEEEEEESC
T ss_pred CCCcEEEEEECC
Confidence 9999888653
No 257
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.01 E-value=3.8e-10 Score=96.55 Aligned_cols=86 Identities=19% Similarity=0.142 Sum_probs=70.4
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~ 174 (290)
..+.+.+++.+... ++ +|||||||+|.++..+++. +.+|+++|+++++++.++++....+++++++|+.++++++.
T Consensus 33 ~~i~~~Iv~~~~~~-~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~ 108 (271)
T 3fut_A 33 EAHLRRIVEAARPF-TG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEV 108 (271)
T ss_dssp HHHHHHHHHHHCCC-CS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGS
T ss_pred HHHHHHHHHhcCCC-CC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhc
Confidence 44566666666554 67 9999999999999999998 57999999999999999998776789999999988776532
Q ss_pred -CccEEEecCc
Q 022929 175 -YADRYVSAGS 184 (290)
Q Consensus 175 -~~D~i~~~~~ 184 (290)
.+|.|+++.-
T Consensus 109 ~~~~~iv~NlP 119 (271)
T 3fut_A 109 PQGSLLVANLP 119 (271)
T ss_dssp CTTEEEEEEEC
T ss_pred cCccEEEecCc
Confidence 5888887643
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.00 E-value=7.9e-10 Score=93.81 Aligned_cols=84 Identities=17% Similarity=0.212 Sum_probs=66.6
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~~~~ 173 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +.+|+++|+++++++.++++.. ..+++++++|+.++++++
T Consensus 15 ~~i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQ-KTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHHCCC-TTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHHhcCCC-CcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHH
Confidence 34555566665543 7889999999999999999998 5799999999999999998754 357999999998887542
Q ss_pred ----CCccEEEec
Q 022929 174 ----DYADRYVSA 182 (290)
Q Consensus 174 ----~~~D~i~~~ 182 (290)
++|| |+++
T Consensus 92 ~~~~~~~~-vv~N 103 (255)
T 3tqs_A 92 VKTDKPLR-VVGN 103 (255)
T ss_dssp SCCSSCEE-EEEE
T ss_pred hccCCCeE-EEec
Confidence 4577 5543
No 259
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.00 E-value=4.4e-09 Score=93.74 Aligned_cols=149 Identities=18% Similarity=0.178 Sum_probs=97.0
Q ss_pred CCCEEEEEcCccchhHHHHH--------hhC-------CCCeEEEEeCCHHHHHHHhhhCC---------------CCCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIV--------KHV-------DAKNVTILDQSPHQLAKAKQKEP---------------LKEC 159 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s~~~~~~a~~~~~---------------~~~v 159 (290)
...+|+|+|||+|..+..+. +.+ |..+|...|+-.......=+.+. ..+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 35799999999999888762 222 56889999985533221111111 0011
Q ss_pred eE---EEcCCCCCCCCCCCccEEEecCcccccCCH--------------------------------------HHHHHHH
Q 022929 160 KI---VEGDAEDLPFPTDYADRYVSAGSIEYWPDP--------------------------------------QRGIREA 198 (290)
Q Consensus 160 ~~---~~~d~~~l~~~~~~~D~i~~~~~l~~~~~~--------------------------------------~~~l~~~ 198 (290)
-| +.+....-.++++++|+|+|+.++||+++. ..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 334444445888999999999999999732 2468888
Q ss_pred HhccCCCCEEEEEccCCCch--------------hHhhhhHHH----------------hhcCCCHHHHHHHHH-HCCCc
Q 022929 199 YRVLKLGGKACIIGPVYPTF--------------WLSRYFADV----------------WMLFPKEEEYIEWFQ-KAGFK 247 (290)
Q Consensus 199 ~~~L~pgG~l~i~~~~~~~~--------------~~~~~~~~~----------------~~~~~~~~~~~~ll~-~aGf~ 247 (290)
.+.|+|||.+++.....+.. .....+.+. -..+++.+++.++++ +.||+
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcE
Confidence 99999999999986554321 011111110 112478999999998 59999
Q ss_pred EEEEEEcCccc
Q 022929 248 DVQLKRIGPKW 258 (290)
Q Consensus 248 ~v~~~~~~~~~ 258 (290)
+..++.+...|
T Consensus 292 I~~le~~~~~~ 302 (374)
T 3b5i_A 292 IDKLVVYKGGS 302 (374)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEEeecC
Confidence 98888765443
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.97 E-value=2.2e-09 Score=96.51 Aligned_cols=121 Identities=11% Similarity=0.029 Sum_probs=89.0
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCC-------------------------------------
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA------------------------------------- 134 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~------------------------------------- 134 (290)
+..+.++..++...... ++.+|||++||+|.+++.++....+
T Consensus 178 pl~e~lAa~ll~~~~~~-~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 256 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWK-AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNES 256 (385)
T ss_dssp CCCHHHHHHHHHTSCCC-TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSC
T ss_pred CCcHHHHHHHHHhhCCC-CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccC
Confidence 44566777766666553 7789999999999999998765211
Q ss_pred -CeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCCCCCCCccEEEecCccc-cc---CCHHHHHHHHHhccCC-
Q 022929 135 -KNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLPFPTDYADRYVSAGSIE-YW---PDPQRGIREAYRVLKL- 204 (290)
Q Consensus 135 -~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~-~~---~~~~~~l~~~~~~L~p- 204 (290)
.+|+|+|+++.+++.|+++... .++++.+.|+.+++.+ ++||+|+++--.. .+ .+...+.+++.+.|++
T Consensus 257 ~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 257 KFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 5799999999999999987432 3589999999887654 4799999965432 11 2234566777777766
Q ss_pred -CCEEEEEccC
Q 022929 205 -GGKACIIGPV 214 (290)
Q Consensus 205 -gG~l~i~~~~ 214 (290)
|+.+++.+..
T Consensus 336 ~g~~~~iit~~ 346 (385)
T 3ldu_A 336 KNWSYYLITSY 346 (385)
T ss_dssp BSCEEEEEESC
T ss_pred CCCEEEEEECC
Confidence 8888887653
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.96 E-value=1.3e-09 Score=100.03 Aligned_cols=116 Identities=19% Similarity=0.184 Sum_probs=85.4
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC-------------CCCeEEEEeCCHHHHHHHhhhCC---CC--
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-------------DAKNVTILDQSPHQLAKAKQKEP---LK-- 157 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-------------~~~~v~~vD~s~~~~~~a~~~~~---~~-- 157 (290)
.+...+++.+.. .++.+|+|+|||+|.++..+++.. +..+++|+|+++.+++.|+.+.. ..
T Consensus 158 ~v~~~mv~~l~~-~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 158 PLIQAMVDCINP-QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHHHHHCC-CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHhCC-CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcC
Confidence 344444444433 367899999999999999888753 24689999999999999987632 11
Q ss_pred CceEEEcCCCCCCCCCCCccEEEecCcccccCC-----------------HHHHHHHHHhccCCCCEEEEEcc
Q 022929 158 ECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPD-----------------PQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 158 ~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~-----------------~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+.++|....+... +||+|+++-.+..... ...+++.+.++|+|||++.++.+
T Consensus 237 ~~~i~~gD~l~~~~~~-~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 237 RSPIVCEDSLEKEPST-LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSEEECCTTTSCCSS-CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEeeCCCCCCcccC-CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 5678999987765443 6999999754443211 13689999999999999988765
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.95 E-value=1.5e-09 Score=97.21 Aligned_cols=110 Identities=13% Similarity=0.082 Sum_probs=79.0
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEEEcCCCCCC-
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIVEGDAEDLP- 170 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~~~d~~~l~- 170 (290)
+.+...+++.... .+.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++.. ..+++++.+|+.++.
T Consensus 200 ~~l~~~~~~~~~~--~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 200 IQMLEWALDVTKG--SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHTTT--CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHhhc--CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 4445555555443 3578999999999999999886 5799999999999999998743 247899999986531
Q ss_pred -CCC--------------CCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 171 -FPT--------------DYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 171 -~~~--------------~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+.. .+||+|++.---. .+..++.+.|+++|.+++.++.
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~------g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRS------GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTT------CCCHHHHHHHTTSSEEEEEESC
T ss_pred HHhhccccccccccccccCCCCEEEECcCcc------ccHHHHHHHHhCCCEEEEEECC
Confidence 111 2699998642211 2345566777789988887664
No 263
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.93 E-value=4.8e-09 Score=88.73 Aligned_cols=76 Identities=24% Similarity=0.390 Sum_probs=63.4
Q ss_pred HHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCC
Q 022929 95 EDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~ 173 (290)
..+...+++.+... ++.+|||||||+|.++..+++. +..+++++|+++.+++.++++ ...+++++++|+.++++++
T Consensus 17 ~~i~~~iv~~~~~~-~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 17 EGVLKKIAEELNIE-EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHHhcCCC-CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCChhH
Confidence 44556666666553 7889999999999999999987 358999999999999999988 5568999999999887654
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=9.8e-10 Score=95.40 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=68.1
Q ss_pred HHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC--CCceEEEcCCCCCC--CC
Q 022929 97 MRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECKIVEGDAEDLP--FP 172 (290)
Q Consensus 97 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~v~~~~~d~~~l~--~~ 172 (290)
+...+++.+.. .++.+|||+|||+|.++..+++..++.+|+|+|+|+.+++.|+++... .+++++++|+.+++ +.
T Consensus 14 Ll~e~l~~L~~-~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 14 MVREVIEFLKP-EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp THHHHHHHHCC-CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcCC-CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 33444444443 378899999999999999999998778999999999999999988643 57999999987764 11
Q ss_pred ---CCCccEEEecC
Q 022929 173 ---TDYADRYVSAG 183 (290)
Q Consensus 173 ---~~~~D~i~~~~ 183 (290)
..+||.|++..
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 14699999754
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.87 E-value=3e-08 Score=86.45 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhC---CCCCceEEEcCCCCCCCCC---CCccEEEe
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---PLKECKIVEGDAEDLPFPT---DYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~~~d~~~l~~~~---~~~D~i~~ 181 (290)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++. ...+++++.+|+.+++... .+||.|++
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 378999999999999999999875 3589999999999999998874 3357899999987764321 46999997
Q ss_pred c------CcccccC-----------CH-------HHHHHHHHhccCCCCEEEEEccCC
Q 022929 182 A------GSIEYWP-----------DP-------QRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 182 ~------~~l~~~~-----------~~-------~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
. .++...+ +. .++++.+.++++ ||.|+..++..
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 2 1221111 11 246777888886 99988877654
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.87 E-value=1.6e-09 Score=97.10 Aligned_cols=99 Identities=21% Similarity=0.146 Sum_probs=78.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC------------------CCceEEEcCCCCCC-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------------------KECKIVEGDAEDLP- 170 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------~~v~~~~~d~~~l~- 170 (290)
++.+|||+|||+|..++.++...++.+|+++|+++++++.+++|... .+++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 57899999999999999999987778899999999999999987432 23788999985532
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 171 FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 171 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
...++||+|++.- . .....+++.+.+.|++||.+++..
T Consensus 127 ~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1134699999542 1 234678999999999999888864
No 267
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.85 E-value=5.6e-09 Score=92.42 Aligned_cols=149 Identities=14% Similarity=0.106 Sum_probs=101.1
Q ss_pred CCCEEEEEcCccchhHHHHHhh----------------CCCCeEEEEeCCHHHHHHHhhhCCC----CCceEEE---cCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH----------------VDAKNVTILDQSPHQLAKAKQKEPL----KECKIVE---GDA 166 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~----------------~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~---~d~ 166 (290)
..-+|+|+||++|..+..+... .|..+|+..|+.......+-+.+.. .+.-|+. +.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4578999999999876654433 3568899999977666666555432 1233444 344
Q ss_pred CCCCCCCCCccEEEecCcccccCCHH---------------------------------HHHHHHHhccCCCCEEEEEcc
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWPDPQ---------------------------------RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~~~~---------------------------------~~l~~~~~~L~pgG~l~i~~~ 213 (290)
....++++++|+|+|+.++||+++.. .+|+...+.|+|||.+++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 44568899999999999999986411 358888999999999998755
Q ss_pred CCCch------------hHhhhhHHH----------------hhcCCCHHHHHHHHHHCCC-cEEEEEEcCccc
Q 022929 214 VYPTF------------WLSRYFADV----------------WMLFPKEEEYIEWFQKAGF-KDVQLKRIGPKW 258 (290)
Q Consensus 214 ~~~~~------------~~~~~~~~~----------------~~~~~~~~~~~~ll~~aGf-~~v~~~~~~~~~ 258 (290)
..+.. .+...+.++ -..+++.+++..++++.|+ ++.+.+.+...|
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~ 284 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYW 284 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEET
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeecc
Confidence 44321 122222111 1135789999999999964 888777664444
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.82 E-value=2.4e-09 Score=96.11 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=78.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhCCC----CC-ceEEEcCCCCC-C-CCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPL----KE-CKIVEGDAEDL-P-FPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~-v~~~~~d~~~l-~-~~~~~~D~i~~ 181 (290)
++.+|||++||+|.+++.++...++ .+|+++|+++.+++.+++|... ++ ++++.+|+.++ . ...++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 6789999999999999999997544 6899999999999999988542 23 78899998542 1 11346999998
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.- ...+..+++.+.+.|++||.|++..
T Consensus 132 DP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 64 1234578999999999999888865
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=4.7e-09 Score=90.17 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=60.2
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCC--CeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDA--KNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~ 173 (290)
.+...+++.+... ++.+|||||||+|.++..+++..+. .+|+++|+++.+++.++++. ..+++++++|+.++++++
T Consensus 29 ~i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 29 GVIDAIVAAIRPE-RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHHHHCCC-TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCC-CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECChhcCChhH
Confidence 3455555555543 7889999999999999999988421 33999999999999999874 457999999998877543
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.79 E-value=4.5e-08 Score=84.12 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=82.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC--------CCCCceEEEcCCCCC-CCCCCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--------PLKECKIVEGDAEDL-PFPTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--------~~~~v~~~~~d~~~l-~~~~~~~D~i~ 180 (290)
+.++||-||.|.|..+..+++..+..+++.||+++.+++.+++.+ ..++++++.+|.... ....++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 578999999999999999999877789999999999999998764 246799999999653 34456799999
Q ss_pred ecCcccccCC----HHHHHHHHHhccCCCCEEEEEc
Q 022929 181 SAGSIEYWPD----PQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 181 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
....-..-+. -..+++.+.+.|+|||.++...
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 7532111111 1378999999999999998853
No 271
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.74 E-value=2.4e-08 Score=96.34 Aligned_cols=122 Identities=10% Similarity=0.003 Sum_probs=85.7
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhC--------------------------------------
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-------------------------------------- 132 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-------------------------------------- 132 (290)
.+..+.++..++...... ++..|||.+||+|.+++.++...
T Consensus 172 apl~e~LAa~ll~~~~~~-~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~ 250 (703)
T 3v97_A 172 APIKETLAAAIVMRSGWQ-PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARK 250 (703)
T ss_dssp CSSCHHHHHHHHHHTTCC-TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCCC-CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhh
Confidence 456677877777776553 67899999999999999887641
Q ss_pred ----CCCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCC--CCCCCccEEEecCccc-ccC---CHHHHHHHH
Q 022929 133 ----DAKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLP--FPTDYADRYVSAGSIE-YWP---DPQRGIREA 198 (290)
Q Consensus 133 ----~~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~--~~~~~~D~i~~~~~l~-~~~---~~~~~l~~~ 198 (290)
+..+++|+|+++.+++.|+.|+.. ..+++.++|+.++. ...++||+|+++--.. .+. +...+.+.+
T Consensus 251 ~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 251 GLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred ccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 125899999999999999988432 23789999997763 3333799999973322 111 223344444
Q ss_pred H---hccCCCCEEEEEcc
Q 022929 199 Y---RVLKLGGKACIIGP 213 (290)
Q Consensus 199 ~---~~L~pgG~l~i~~~ 213 (290)
. +.+.|||.+++.+.
T Consensus 331 ~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHCTTCEEEEEES
T ss_pred HHHHHhhCCCCeEEEEeC
Confidence 4 44458999998754
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.74 E-value=7.8e-09 Score=87.72 Aligned_cols=127 Identities=21% Similarity=0.236 Sum_probs=84.3
Q ss_pred CCCEEEEEcCccchhHHHHHhh-------CCC-----CeEEEEeCCH---HHHHH-----------HhhhC---------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH-------VDA-----KNVTILDQSP---HQLAK-----------AKQKE--------- 154 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~-------~~~-----~~v~~vD~s~---~~~~~-----------a~~~~--------- 154 (290)
+..+|||||+|+|..+..+++. .|. .+++++|..+ +.+.. +++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5679999999999988876654 453 5899999765 44443 33321
Q ss_pred ------C--CCCceEEEcCCCC-CCCC-C---CCccEEEecC-cccccCC--HHHHHHHHHhccCCCCEEEEEccCCCch
Q 022929 155 ------P--LKECKIVEGDAED-LPFP-T---DYADRYVSAG-SIEYWPD--PQRGIREAYRVLKLGGKACIIGPVYPTF 218 (290)
Q Consensus 155 ------~--~~~v~~~~~d~~~-l~~~-~---~~~D~i~~~~-~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 218 (290)
. ..+++++.+|+.+ ++.. + ..||+|+... .-..-++ ...+++.+.++|+|||.++.-+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 1 1246788899854 3322 2 2699999842 2211222 2579999999999999987522
Q ss_pred hHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 219 WLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
....+...|.++||++.+..-.+.
T Consensus 214 --------------aa~~vrr~L~~aGF~v~~~~g~~~ 237 (257)
T 2qy6_A 214 --------------SAGFVRRGLQEAGFTMQKRKGFGR 237 (257)
T ss_dssp --------------CBHHHHHHHHHHTEEEEEECCSTT
T ss_pred --------------CCHHHHHHHHHCCCEEEeCCCCCC
Confidence 123567888889999776655543
No 273
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.70 E-value=9.4e-08 Score=80.64 Aligned_cols=107 Identities=11% Similarity=0.037 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 107 LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 107 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
..+++.+|||+|||+|.++..+++..+...++++|++.+.......... ..++..+..+++...+.+++||+|+|..+.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCcc
Confidence 3457889999999999999998887555688899987443100110000 014555677765556777789999998766
Q ss_pred cccCCH-----H--HHHHHHHhccCCC-CEEEEEccC
Q 022929 186 EYWPDP-----Q--RGIREAYRVLKLG-GKACIIGPV 214 (290)
Q Consensus 186 ~~~~~~-----~--~~l~~~~~~L~pg-G~l~i~~~~ 214 (290)
+ .... . .+++.+.++|+|| |.+++-.+.
T Consensus 151 n-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 151 S-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred C-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 5 3221 1 3568889999999 999885443
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=1.3e-08 Score=86.12 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=61.1
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCCCCCCC
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l~~~~~ 174 (290)
.+...+++.+... ++.+|||||||+|.++. +. ..+..+|+++|+++.+++.++++... .+++++++|+.++++++.
T Consensus 8 ~i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 8 FVIDSIVSAINPQ-KGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHHHHCCC-TTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred HHHHHHHHhcCCC-CcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 3444555555443 77899999999999999 64 42222399999999999999987643 479999999988765321
Q ss_pred -----CccEEEecC
Q 022929 175 -----YADRYVSAG 183 (290)
Q Consensus 175 -----~~D~i~~~~ 183 (290)
..|.|+++.
T Consensus 85 ~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 85 AEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHTSCEEEEEEC
T ss_pred hcccCCceEEEECC
Confidence 235666553
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.63 E-value=3.4e-08 Score=92.61 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=92.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC------------------CCeEEEEeCCHHHHHHHhhhCC---CCC-----ceEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD------------------AKNVTILDQSPHQLAKAKQKEP---LKE-----CKIVE 163 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~------------------~~~v~~vD~s~~~~~~a~~~~~---~~~-----v~~~~ 163 (290)
++.+|+|.+||+|.++..+++... ...++|+|+++.+++.|+.+.. ... +.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 678999999999999988876531 2479999999999999987632 222 67889
Q ss_pred cCCCCCC-CCCCCccEEEecCcccccC-------------C-HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHh
Q 022929 164 GDAEDLP-FPTDYADRYVSAGSIEYWP-------------D-PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW 228 (290)
Q Consensus 164 ~d~~~l~-~~~~~~D~i~~~~~l~~~~-------------~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 228 (290)
+|....+ ....+||+|+++--+.... + ...++..+.+.|+|||++.++.+... .. ..
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~---L~---~~-- 320 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNV---LF---EG-- 320 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHH---HH---CC--
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcc---ee---cC--
Confidence 9886533 3345799999964433221 1 23689999999999999988754210 00 00
Q ss_pred hcCCCHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 229 MLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 229 ~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
.....+++.|.+.+ .+..+..++....
T Consensus 321 ---~~~~~iR~~L~~~~-~l~~ii~Lp~~~F 347 (541)
T 2ar0_A 321 ---GKGTDIRRDLMDKC-HLHTILRLPTGIF 347 (541)
T ss_dssp ---THHHHHHHHHHHHE-EEEEEEECCSSCS
T ss_pred ---cHHHHHHHHHhhcC-CEEEEEEcCcCcc
Confidence 01245666665544 4566677776543
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.58 E-value=9e-07 Score=82.76 Aligned_cols=139 Identities=13% Similarity=0.055 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCccchhHHHHHhhC---CCCeEEEEeCCHHHHHHHhhhCC---C--CCceEEEcCCCCC--C-CCCCCcc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHV---DAKNVTILDQSPHQLAKAKQKEP---L--KECKIVEGDAEDL--P-FPTDYAD 177 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~---~--~~v~~~~~d~~~l--~-~~~~~~D 177 (290)
.++.+|+|.+||+|.++..+++.. +...++|+|+++.+...|+.+.. . .++.+.++|.... | ....+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 367899999999999999888874 25789999999999999987632 1 3467899998654 3 3456799
Q ss_pred EEEecCcc--cc-----------------cC---C-HHHHHHHHHhccC-CCCEEEEEccCCCchhHhhhhHHHhhcCCC
Q 022929 178 RYVSAGSI--EY-----------------WP---D-PQRGIREAYRVLK-LGGKACIIGPVYPTFWLSRYFADVWMLFPK 233 (290)
Q Consensus 178 ~i~~~~~l--~~-----------------~~---~-~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 233 (290)
+|+++--. .+ ++ + .-.++..+.+.|+ |||++.++.+..- .. .. ..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~---Lf---~~-----~~ 368 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV---LF---RG-----NA 368 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH---HH---CC-----TH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH---hh---CC-----ch
Confidence 99985111 11 10 1 1248899999999 9999988765321 00 00 01
Q ss_pred HHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 234 EEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 234 ~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
...+++.|-+.+. +..+..++.+..
T Consensus 369 ~~~iRk~Lle~~~-l~~II~LP~~lF 393 (542)
T 3lkd_A 369 EGTIRKALLEEGA-IDTVIGLPANIF 393 (542)
T ss_dssp HHHHHHHHHHTTC-EEEEEECCSSCS
T ss_pred hHHHHHHHHhCCc-eeEEEEcccccc
Confidence 3567777777655 667777876544
No 277
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.57 E-value=1.1e-08 Score=86.92 Aligned_cols=76 Identities=17% Similarity=0.169 Sum_probs=60.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCH-------HHHHHHhhhCCC----CCceEEEcCCCCC-C-CCC--C
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP-------HQLAKAKQKEPL----KECKIVEGDAEDL-P-FPT--D 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~-------~~~~~a~~~~~~----~~v~~~~~d~~~l-~-~~~--~ 174 (290)
++.+|||+|||+|.++..++.. +.+|+++|+|+ ++++.|+++... ++++++++|+.++ + +++ +
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 5689999999999999999997 67999999999 999999876421 3589999998663 2 333 5
Q ss_pred CccEEEecCcccc
Q 022929 175 YADRYVSAGSIEY 187 (290)
Q Consensus 175 ~~D~i~~~~~l~~ 187 (290)
+||+|++.-.+.+
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 6999999776654
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.56 E-value=2.7e-08 Score=94.05 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=70.9
Q ss_pred CCCEEEEEcCccchhHHHHHhh---C----------CCCeEEEEeCCHHHHHHHhhh---CCCCCceEEEcCCCCCCCC-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH---V----------DAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLPFP- 172 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~---~----------~~~~v~~vD~s~~~~~~a~~~---~~~~~v~~~~~d~~~l~~~- 172 (290)
.+..|||||||+|.++...+.. . ...+|++||-|+.++...+.. .-.+.|+++.+|++++..+
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 3568999999999996432211 1 134999999999766554432 2235699999999987662
Q ss_pred ----CCCccEEEecCcccccCC--HHHHHHHHHhccCCCCEEE
Q 022929 173 ----TDYADRYVSAGSIEYWPD--PQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 173 ----~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~ 209 (290)
.+++|+|+|-..-....+ ....|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 456999999766443322 2367888889999999864
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.53 E-value=2.2e-07 Score=87.89 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=68.6
Q ss_pred CCCEEEEEcCccchhHHHH---HhhCC-CCeEEEEeCCHHHHHHHhhh----CCCCCceEEEcCCCCCCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGI---VKHVD-AKNVTILDQSPHQLAKAKQK----EPLKECKIVEGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l---~~~~~-~~~v~~vD~s~~~~~~a~~~----~~~~~v~~~~~d~~~l~~~~~~~D~i~~ 181 (290)
....|||+|||+|.+.... ++... ..+|++||-|+.+. .+++. .-.++|+++.+|++++..++ ++|+|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~eev~LPE-KVDIIVS 434 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDMREWVAPE-KADIIVS 434 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCTTTCCCSS-CEEEEEC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcceeccCCc-ccCEEEE
Confidence 4468999999999984444 33321 13789999998543 34332 22356999999999988775 5999998
Q ss_pred cCcc---cccCCHHHHHHHHHhccCCCCEEE
Q 022929 182 AGSI---EYWPDPQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 182 ~~~l---~~~~~~~~~l~~~~~~L~pgG~l~ 209 (290)
-.+- .+...+ .++....++|||||.++
T Consensus 435 EwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 5443 233333 67888899999999864
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.53 E-value=4.7e-08 Score=87.99 Aligned_cols=71 Identities=23% Similarity=0.370 Sum_probs=59.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-----CCCceEEEcCCCCC-CC-CCCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-----LKECKIVEGDAEDL-PF-PTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~v~~~~~d~~~l-~~-~~~~~D~i~~~ 182 (290)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++|.. ..+++++++|+.+. +. .+++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4799999999999999999887 6799999999999999998843 24689999999763 32 23469999984
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.53 E-value=1.1e-06 Score=82.21 Aligned_cols=137 Identities=13% Similarity=0.024 Sum_probs=92.2
Q ss_pred CEEEEEcCccchhHHHHHhhCC---------------CCeEEEEeCCHHHHHHHhhhCCC----CCceEEEcCCCCCC-C
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVD---------------AKNVTILDQSPHQLAKAKQKEPL----KECKIVEGDAEDLP-F 171 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~---------------~~~v~~vD~s~~~~~~a~~~~~~----~~v~~~~~d~~~l~-~ 171 (290)
.+|+|.+||+|.++..+++... ...++|+|+++.++..|+.+... .++.+.++|....+ .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999988765421 35899999999999999876321 22333677765443 4
Q ss_pred CCCCccEEEecCcccc-------------------------cC---CH-HHHHHHHHhccCCCCEEEEEccCCCchhHhh
Q 022929 172 PTDYADRYVSAGSIEY-------------------------WP---DP-QRGIREAYRVLKLGGKACIIGPVYPTFWLSR 222 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~-------------------------~~---~~-~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 222 (290)
...+||+|+++--... .+ +. -.++..+.+.|+|||++.++.+..-. .
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L---~- 401 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSM---S- 401 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHH---H-
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhh---h-
Confidence 4568999999522221 11 11 25889999999999999887643210 0
Q ss_pred hhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 223 YFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
.. -.....+++.|.+.+. +..+..++.+..
T Consensus 402 --~~----~~~~~~iRk~Lle~~~-l~aII~LP~~lF 431 (544)
T 3khk_A 402 --SN----TNNEGEIRKTLVEQDL-VECMVALPGQLF 431 (544)
T ss_dssp --CC----GGGHHHHHHHHHHTTC-EEEEEECCTTBC
T ss_pred --cC----cchHHHHHHHHHhCCc-HhEEEECCCCCC
Confidence 00 0024578888877765 677778876554
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.49 E-value=2.2e-06 Score=69.70 Aligned_cols=95 Identities=15% Similarity=0.006 Sum_probs=70.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC------CCCceEEEcCCCCC--------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------LKECKIVEGDAEDL-------------- 169 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~v~~~~~d~~~l-------------- 169 (290)
+..+||||||| .-+..+++. ++.+|+.+|.+++..+.|+++.. ..+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 56899999995 566666664 47899999999999999987632 34689999996432
Q ss_pred -C--------C-CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 170 -P--------F-PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 170 -~--------~-~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
+ . ..++||+|+...- .....+..+.+.|+|||.+++-+
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 2367999998653 22356667789999999995543
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.46 E-value=1.4e-07 Score=79.95 Aligned_cols=92 Identities=14% Similarity=0.091 Sum_probs=61.6
Q ss_pred CEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh-------CCC-----CCceEEEcCCCC-CCCCCCCccE
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-------EPL-----KECKIVEGDAED-LPFPTDYADR 178 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-------~~~-----~~v~~~~~d~~~-l~~~~~~~D~ 178 (290)
.+|||+|||+|..+..++.. +.+|+++|.++.+.+.++++ ... .+++++++|..+ ++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 89999999999999999998 67899999999764444332 221 358899999855 2322236999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGG 206 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG 206 (290)
|++.-...+-. ....+++..+.|++.+
T Consensus 168 V~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 168 VYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred EEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 99987665432 2234445555555433
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.46 E-value=1.3e-07 Score=79.96 Aligned_cols=106 Identities=16% Similarity=0.079 Sum_probs=70.9
Q ss_pred CCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-CCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 108 SNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 108 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
..++.+|||+|||+|.++..+++..+...++|+|++..+...+.... ...++..+..++....++..++|+|+|.....
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGES 167 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccC
Confidence 34788999999999999999987766678999999765322111100 01133344444333335567899999987766
Q ss_pred ccCCH-----H--HHHHHHHhccCCC--CEEEEEccC
Q 022929 187 YWPDP-----Q--RGIREAYRVLKLG--GKACIIGPV 214 (290)
Q Consensus 187 ~~~~~-----~--~~l~~~~~~L~pg--G~l~i~~~~ 214 (290)
.... . .+++-+.++|+|| |.+++-.+.
T Consensus 168 -sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 -SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 3332 1 3577778999999 999886543
No 285
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.39 E-value=2.1e-07 Score=70.90 Aligned_cols=84 Identities=21% Similarity=0.218 Sum_probs=58.3
Q ss_pred CCCEEEEEcCccc-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCC--CCccEEEecCccc
Q 022929 110 RNMLVVDVGGGTG-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT--DYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~--~~~D~i~~~~~l~ 186 (290)
++.+|||||||+| ..+..|++.. +..|+++|+++.+++ +++.|+.+ |..+ +.||+|++.+--
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~------------~v~dDiF~-P~~~~Y~~~DLIYsirPP- 99 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG------------IVRDDITS-PRMEIYRGAALIYSIRPP- 99 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT------------EECCCSSS-CCHHHHTTEEEEEEESCC-
T ss_pred CCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc------------eEEccCCC-CcccccCCcCEEEEcCCC-
Confidence 5689999999999 6999999843 789999999887655 88899987 4332 359999875432
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.+..+.++.+.. |.-+++..
T Consensus 100 --~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 100 --AEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp --TTTHHHHHHHHHHH--TCEEEEEC
T ss_pred --HHHHHHHHHHHHHc--CCCEEEEc
Confidence 23334444444433 45565543
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.36 E-value=2.6e-06 Score=75.16 Aligned_cols=121 Identities=14% Similarity=0.053 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
+++.++||+||.+|.++..++++ +.+|++||+.+ +-.... ..++++++..|........+++|+|+|..+.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~-l~~~l~---~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~--- 280 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGP-MAQSLM---DTGQVTWLREDGFKFRPTRSNISWMVCDMVE--- 280 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSC-CCHHHH---TTTCEEEECSCTTTCCCCSSCEEEEEECCSS---
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhh-cChhhc---cCCCeEEEeCccccccCCCCCcCEEEEcCCC---
Confidence 48999999999999999999988 78999999863 212222 2358999999998877667789999997765
Q ss_pred CCHHHHHHHHHhccCCC---CEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCc
Q 022929 189 PDPQRGIREAYRVLKLG---GKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFK 247 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pg---G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 247 (290)
++...+..+.++|..+ +.++..-.....- . ..... ....+.+.|...||.
T Consensus 281 -~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~-~-~~l~~------~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 281 -KPAKVAALMAQWLVNGWCRETIFNLKLPMKKR-Y-EEVSH------NLAYIQAQLDEHGIN 333 (375)
T ss_dssp -CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSH-H-HHHHH------HHHHHHHHHHHTTCC
T ss_pred -ChHHhHHHHHHHHhccccceEEEEEEecccch-H-HHHHH------HHHHHHHHHHhcCcc
Confidence 4555666666665554 4444433222110 0 00111 245677889999996
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.34 E-value=8.5e-07 Score=75.28 Aligned_cols=80 Identities=25% Similarity=0.311 Sum_probs=64.3
Q ss_pred HHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CC
Q 022929 98 RDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FP 172 (290)
Q Consensus 98 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~ 172 (290)
...+++.+.. +++..+||++||.|..+..+++. +.+|+|+|.++.+++.|++ ....+++++++|+.+++ ..
T Consensus 11 l~e~le~L~~-~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 11 YQEALDLLAV-RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHHHTC-CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhCC-CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHHcC
Confidence 3444454444 37889999999999999999998 6799999999999999998 65568999999997753 22
Q ss_pred CCCccEEEe
Q 022929 173 TDYADRYVS 181 (290)
Q Consensus 173 ~~~~D~i~~ 181 (290)
.+++|.|++
T Consensus 87 ~~~vDgIL~ 95 (285)
T 1wg8_A 87 VERVDGILA 95 (285)
T ss_dssp CSCEEEEEE
T ss_pred CCCcCEEEe
Confidence 246999997
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.30 E-value=1.5e-06 Score=74.00 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=71.9
Q ss_pred hccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh-CCCCCceEEEcCCCCCCCCCCCccEE
Q 022929 101 ALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECKIVEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 101 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~v~~~~~d~~~l~~~~~~~D~i 179 (290)
+.+. .+..++.+|||+||++|.++..+++..+...|.|+|+........... ....++.....++....+..+.+|+|
T Consensus 73 i~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlV 151 (300)
T 3eld_A 73 LHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTL 151 (300)
T ss_dssp HHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEE
T ss_pred HHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEE
Confidence 3344 455689999999999999999999876567899999965321100000 00112333333333333456679999
Q ss_pred EecCcccccCCH-------HHHHHHHHhccCCC-CEEEEEccC
Q 022929 180 VSAGSIEYWPDP-------QRGIREAYRVLKLG-GKACIIGPV 214 (290)
Q Consensus 180 ~~~~~l~~~~~~-------~~~l~~~~~~L~pg-G~l~i~~~~ 214 (290)
+|..... .... ..+++-+.++|+|| |.+++-.+.
T Consensus 152 lsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 152 LCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp EECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 9976655 3332 14577778999999 999886443
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.30 E-value=1.8e-06 Score=83.01 Aligned_cols=136 Identities=12% Similarity=0.038 Sum_probs=89.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC---CCeEEEEeCCHHHHHHH--hhhCCC----C---CceEEEcCCCCC-CCCCCCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD---AKNVTILDQSPHQLAKA--KQKEPL----K---ECKIVEGDAEDL-PFPTDYA 176 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~---~~~v~~vD~s~~~~~~a--~~~~~~----~---~v~~~~~d~~~l-~~~~~~~ 176 (290)
++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.+... . ...+...|+... +....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 578999999999999999998764 35899999999999999 544322 1 124455555442 2234579
Q ss_pred cEEEecCcccc-cC---------------------------C-HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHH
Q 022929 177 DRYVSAGSIEY-WP---------------------------D-PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADV 227 (290)
Q Consensus 177 D~i~~~~~l~~-~~---------------------------~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~ 227 (290)
|+|+++--... .. + ...+++.+.+.|+|||.+.++.+..- +... .
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~---Lf~s--g- 474 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY---LTAQ--G- 474 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH---HHCC--S-
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH---hccC--C-
Confidence 99999533311 00 1 23477889999999999998865421 1000 0
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 228 WMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 228 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
.....+++.|.+. +.+..+..++.
T Consensus 475 ----~~~kkLRk~LLe~-~~I~aIIdLP~ 498 (878)
T 3s1s_A 475 ----NESKAFREFLVGN-FGLEHIFLYPR 498 (878)
T ss_dssp ----HHHHHHHHHHTTT-TCEEEEEECCB
T ss_pred ----hHHHHHHHHHHhC-CCeEEEEECCC
Confidence 0135666666654 45677788876
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.18 E-value=5.6e-06 Score=73.35 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=76.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-----------CCceEEEcCCCCC----CCCCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----------KECKIVEGDAEDL----PFPTD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~~v~~~~~d~~~l----~~~~~ 174 (290)
++++||-||.|.|..+..+++. +..+++.||+++.+++.+++.+.. ++++++..|.... .-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 5689999999999999999986 458999999999999999986431 3477888887432 11235
Q ss_pred CccEEEecCcccc-cCC---------HHHHHHHHHhccCCCCEEEEEc
Q 022929 175 YADRYVSAGSIEY-WPD---------PQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 175 ~~D~i~~~~~l~~-~~~---------~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
+||+|+....-.. .++ .+.+++.+.+.|+|||.++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 6999997532111 111 1367889999999999998753
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.17 E-value=2.5e-06 Score=75.58 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---------CCCceEEEcCCCCCC-CCCCCccE
Q 022929 109 NRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---------LKECKIVEGDAEDLP-FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~v~~~~~d~~~l~-~~~~~~D~ 178 (290)
+++.+|||+++|.|.-+..+++......++++|+++.-+...+++.. ..++.+...|...++ ...+.||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 48899999999999999999988666789999999988877776531 135777788876543 33457999
Q ss_pred EEe----cC----cccccCC----------------HHHHHHHHHhccCCCCEEEEEccCCC
Q 022929 179 YVS----AG----SIEYWPD----------------PQRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 179 i~~----~~----~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
|++ +. ++..-++ ..++|+.+.++|||||.|+.+++...
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 986 21 1111111 12588899999999999998877654
No 292
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.09 E-value=2.6e-07 Score=100.09 Aligned_cols=142 Identities=21% Similarity=0.187 Sum_probs=69.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-----CCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-CCCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-----AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-PFPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-~~~~~~~D~i~~~~ 183 (290)
+..+|||||.|+|..+..+.+... ..+|+..|+|+...+.+++++..-+++.-..|..+. ++...+||+|++.+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 567999999999987666555432 247999999988777777654211222222233331 33455699999999
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh---hhHH---HhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR---YFAD---VWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
++|..++....+++++++|||||.+++.+.... ..+.. .+.. .+..+.+.++|.++|+++||..+...
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~-~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLLHTLLAG-HPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHLVALK 1393 (2512)
T ss_dssp C--------------------CCEEEEEEC---------------------------CTTTTSSTTTTEEEEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEecccc-ccccccccccccccccCCcccCHHHHHHHHHhCCCceeeec
Confidence 999888888999999999999999988764321 00000 0000 11223467788899999999887664
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.08 E-value=1.6e-05 Score=67.38 Aligned_cols=111 Identities=16% Similarity=0.079 Sum_probs=74.7
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHH--HhhhCCCCCceEEEc-CCCCCCCCCCCc
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK--AKQKEPLKECKIVEG-DAEDLPFPTDYA 176 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~--a~~~~~~~~v~~~~~-d~~~l~~~~~~~ 176 (290)
++.+...+ .++.+|||+||++|.++..++...+...|+|+|+...-.+. ..+.+..+.+.++.. |+..++. .++
T Consensus 85 ei~~~~~l-~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 85 WLVERRFL-EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp HHHHTTSC-CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCC
T ss_pred HHHHhcCC-CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCC
Confidence 33444333 47889999999999999988888766789999995431100 001122233677776 8766653 459
Q ss_pred cEEEecCcccccCCHH-------HHHHHHHhccCCC-CEEEEEccC
Q 022929 177 DRYVSAGSIEYWPDPQ-------RGIREAYRVLKLG-GKACIIGPV 214 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~-------~~l~~~~~~L~pg-G~l~i~~~~ 214 (290)
|+|+|.-. +.-+++. ++|+-+.++|++| |.+++-...
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 99999766 6566643 3666678899998 888775433
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.06 E-value=1.5e-05 Score=65.44 Aligned_cols=110 Identities=18% Similarity=0.103 Sum_probs=74.6
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHH--HhhhCCCCCceEEEc-CCCCCCCCCCCc
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAK--AKQKEPLKECKIVEG-DAEDLPFPTDYA 176 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~--a~~~~~~~~v~~~~~-d~~~l~~~~~~~ 176 (290)
++.+.. ..+++.+|||+||++|.++..++...+..+|+|+|+-..-.+. ..+....+.++|..+ |+..++- .++
T Consensus 69 ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~ 145 (267)
T 3p8z_A 69 WFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKC 145 (267)
T ss_dssp HHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCC
T ss_pred HHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccc
Confidence 333444 3348889999999999999999888766789999995432210 001223356889988 8765543 459
Q ss_pred cEEEecCcccccCCHH-------HHHHHHHhccCCCCEEEEEccC
Q 022929 177 DRYVSAGSIEYWPDPQ-------RGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~-------~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
|.|+|...- .-+++. ++|+-+.++|++ |.+++-...
T Consensus 146 DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 146 DTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp SEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred cEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 999997655 344432 366677899998 777775433
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.04 E-value=2e-05 Score=65.65 Aligned_cols=103 Identities=17% Similarity=0.098 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCc---eEEEc-CCCCCCCCCCCccEEEe
Q 022929 107 LSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KEC---KIVEG-DAEDLPFPTDYADRYVS 181 (290)
Q Consensus 107 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v---~~~~~-d~~~l~~~~~~~D~i~~ 181 (290)
+.+++.+|||+||+.|.++..+++..+...|.|.++..+. . ....... .++ .|.++ |+.+++ ..++|+|+|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLS 145 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLC 145 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEe
Confidence 5568999999999999999999887322344555553321 0 0001101 344 44446 887643 446999999
Q ss_pred cCcccccCCHH-------HHHHHHHhccCCCC-EEEEEccC
Q 022929 182 AGSIEYWPDPQ-------RGIREAYRVLKLGG-KACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~-------~~l~~~~~~L~pgG-~l~i~~~~ 214 (290)
...-. ..+.. ..++-+.++|+||| .+++-.+.
T Consensus 146 DMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 146 DIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 76554 33321 24666779999999 88776544
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.96 E-value=3e-05 Score=66.30 Aligned_cols=122 Identities=14% Similarity=0.139 Sum_probs=84.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-----CCCeEEEEeCCHH--------------------------HHHHHhhhC---C
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-----DAKNVTILDQSPH--------------------------QLAKAKQKE---P 155 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-----~~~~v~~vD~s~~--------------------------~~~~a~~~~---~ 155 (290)
....|||+|+..|..+..++... ++.+++++|..+. .++.++++. .
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 46799999999999888887654 3688999996421 234455442 2
Q ss_pred --CCCceEEEcCCCC-CC-CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcC
Q 022929 156 --LKECKIVEGDAED-LP-FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLF 231 (290)
Q Consensus 156 --~~~v~~~~~d~~~-l~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 231 (290)
..+++++.+|+.+ ++ ++.++||+|+.-.-. -......++.+...|+|||.+++-+... + ..
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~~---~-----~G----- 250 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYMM---C-----PP----- 250 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCTT---C-----HH-----
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCCC---C-----HH-----
Confidence 3679999999843 33 445679999986532 1223468999999999999887766421 0 11
Q ss_pred CCHHHHHHHHHHCCCc
Q 022929 232 PKEEEYIEWFQKAGFK 247 (290)
Q Consensus 232 ~~~~~~~~ll~~aGf~ 247 (290)
..+.|.+++++.|++
T Consensus 251 -~~~Av~Ef~~~~~i~ 265 (282)
T 2wk1_A 251 -CKDAVDEYRAKFDIA 265 (282)
T ss_dssp -HHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHhcCCc
Confidence 135777888888875
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.76 E-value=3.9e-05 Score=66.32 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=50.1
Q ss_pred CcccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC
Q 022929 91 GHWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE 154 (290)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~ 154 (290)
......+...++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.|+++.
T Consensus 218 ~~~p~~l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 218 APFPLELAERLVRMFS--FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp CCSCHHHHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHH
Confidence 3455667777776654 37899999999999999998887 789999999999999998774
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.71 E-value=0.00019 Score=67.03 Aligned_cols=151 Identities=17% Similarity=0.142 Sum_probs=93.0
Q ss_pred HHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCC-------------CCeEEEEeCCHHHHHHHhhhC---CCCCc
Q 022929 96 DMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVD-------------AKNVTILDQSPHQLAKAKQKE---PLKEC 159 (290)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~---~~~~v 159 (290)
.++..+++.+.. .++.+|+|.+||+|.++..+.+... ...++|+|+++.+...|+-+. .....
T Consensus 204 ~Vv~lmv~l~~p-~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~ 282 (530)
T 3ufb_A 204 PVVRFMVEVMDP-QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYP 282 (530)
T ss_dssp HHHHHHHHHHCC-CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHhhcc-CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccc
Confidence 344444444433 3678999999999999987765321 246999999999999998652 12234
Q ss_pred eEEEcCCCCCCC----CCCCccEEEecCccccc---------------CCH-HHHHHHHHhccC-------CCCEEEEEc
Q 022929 160 KIVEGDAEDLPF----PTDYADRYVSAGSIEYW---------------PDP-QRGIREAYRVLK-------LGGKACIIG 212 (290)
Q Consensus 160 ~~~~~d~~~l~~----~~~~~D~i~~~~~l~~~---------------~~~-~~~l~~~~~~L~-------pgG~l~i~~ 212 (290)
.+..+|....+. ...+||+|+++--+..- .+. ..++..+.+.|| |||++.++.
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 567777755442 23469999996333211 011 246677777776 799998875
Q ss_pred cCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcccc
Q 022929 213 PVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPKWY 259 (290)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 259 (290)
+... .+.. -....+++.|-+. +.+..+..++....
T Consensus 363 P~g~------Lf~~-----~~~~~iRk~Lle~-~~l~aII~LP~~~F 397 (530)
T 3ufb_A 363 PNGT------LFSD-----GISARIKEELLKN-FNLHTIVRLPEGVF 397 (530)
T ss_dssp EHHH------HHCC-----THHHHHHHHHHHH-SEEEEEEECCTTTT
T ss_pred cchh------hhcc-----chHHHHHHHHhhc-CEEEEEEECCcccC
Confidence 5210 0000 0123566666654 44777788876543
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.71 E-value=3.4e-05 Score=67.01 Aligned_cols=80 Identities=18% Similarity=0.205 Sum_probs=62.4
Q ss_pred hhccccCCCCCCCEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CC-
Q 022929 100 DALEPADLSNRNMLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FP- 172 (290)
Q Consensus 100 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~- 172 (290)
.+++.+.. +++..++|..||.|..+..+++.. |..+|+|+|.++++++.++ ++...++++++++..++. ..
T Consensus 48 Evl~~L~i-~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~L~~~g~ 125 (347)
T 3tka_A 48 EAVNGLNI-RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEYVAERDL 125 (347)
T ss_dssp HHHHHTCC-CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHHHHHTTC
T ss_pred HHHHhhCC-CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHHHHhcCC
Confidence 34444443 378999999999999999999885 5689999999999999995 555567999999887652 11
Q ss_pred CCCccEEEe
Q 022929 173 TDYADRYVS 181 (290)
Q Consensus 173 ~~~~D~i~~ 181 (290)
.+++|.|+.
T Consensus 126 ~~~vDgILf 134 (347)
T 3tka_A 126 IGKIDGILL 134 (347)
T ss_dssp TTCEEEEEE
T ss_pred CCcccEEEE
Confidence 125899987
No 300
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.68 E-value=0.00019 Score=62.89 Aligned_cols=142 Identities=13% Similarity=0.133 Sum_probs=97.4
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC------------------------CCCceEEEcC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------------------------LKECKIVEGD 165 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------------------------~~~v~~~~~d 165 (290)
+...|+.+|||.......+....++..++-+|. |++++.-++... ..+..++..|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 568899999999999988887656788888998 777766554311 2467888899
Q ss_pred CCCCC--------C-CCCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCC---chhHhhh----hHH-
Q 022929 166 AEDLP--------F-PTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYP---TFWLSRY----FAD- 226 (290)
Q Consensus 166 ~~~l~--------~-~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~---~~~~~~~----~~~- 226 (290)
+.+.. . ..+...++++-.++.|++.. .++++.+...+ |+|.+++.+...+ ....... +..
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~ 254 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKES 254 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhcc
Confidence 97631 1 23457899999999999754 36888888877 7777766555443 1111111 111
Q ss_pred H------hhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 227 V------WMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 227 ~------~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
. ...|.+.++..+.|.++||+ ....+.
T Consensus 255 rg~~l~~~~~y~s~~~~~~rl~~~Gf~--~a~d~~ 287 (334)
T 1rjd_A 255 RNLEMPTLMTYNSKEKYASRWSAAPNV--IVNDMW 287 (334)
T ss_dssp HCCCCTTTTTTCSHHHHHGGGTTSSEE--EEEEHH
T ss_pred cCCcccccccCCCHHHHHHHHHHCCCC--cccCHH
Confidence 0 11356899999999999997 444443
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.63 E-value=0.00013 Score=64.25 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=58.6
Q ss_pred HHHHHhhccccCCCC-----CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC
Q 022929 95 EDMRDDALEPADLSN-----RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL 169 (290)
Q Consensus 95 ~~~~~~~l~~~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l 169 (290)
..+.+.+++.+.... ++..|||||.|.|.++..|++.....+++++|+++..+...++.....+++++.+|+.++
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 345555555554432 368999999999999999998644568999999999999998766456899999999654
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.47 E-value=0.0019 Score=55.53 Aligned_cols=127 Identities=16% Similarity=0.159 Sum_probs=77.6
Q ss_pred CCCEEEEEcCccchhHHHHH----hhCCC--CeEEEEeCC------------HHHHHHHhhhCC---CCC--ceEEEcCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIV----KHVDA--KNVTILDQS------------PHQLAKAKQKEP---LKE--CKIVEGDA 166 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~----~~~~~--~~v~~vD~s------------~~~~~~a~~~~~---~~~--v~~~~~d~ 166 (290)
+.-+|||+|-|+|....... +..|. .+++.+|-. .+..+...+... ..+ +++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34689999999998654332 23344 345666642 122222222211 123 45677887
Q ss_pred CC-CC-CCCCCccEEEecCcccccCCH----HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHH
Q 022929 167 ED-LP-FPTDYADRYVSAGSIEYWPDP----QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEW 240 (290)
Q Consensus 167 ~~-l~-~~~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (290)
.+ ++ +.+.++|+++... +..-.+| ..+++.+.++++|||.+.-- -....++.-
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY--------------------taag~VRR~ 234 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSY--------------------SSSLSVRKS 234 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES--------------------CCCHHHHHH
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEE--------------------eCcHHHHHH
Confidence 33 33 3444699999743 3333444 47999999999999988531 134678899
Q ss_pred HHHCCCcEEEEEEcCcc
Q 022929 241 FQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 241 l~~aGf~~v~~~~~~~~ 257 (290)
|.++||++.++.-.+.+
T Consensus 235 L~~aGF~V~k~~G~g~K 251 (308)
T 3vyw_A 235 LLTLGFKVGSSREIGRK 251 (308)
T ss_dssp HHHTTCEEEEEECC---
T ss_pred HHHCCCEEEecCCCCCC
Confidence 99999998877665544
No 303
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.30 E-value=0.00029 Score=59.50 Aligned_cols=60 Identities=22% Similarity=0.184 Sum_probs=49.6
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
+....+...++.... .++..|||..||+|..+..+.+. +.+++|+|+++.+++.++++..
T Consensus 196 ~~p~~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 196 PKPRDLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CCCHHHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 344566666666543 47899999999999999998887 7899999999999999998754
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.20 E-value=0.00083 Score=56.99 Aligned_cols=128 Identities=12% Similarity=0.084 Sum_probs=91.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCC-CC---CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAED-LP---FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~-l~---~~~~~~D~i~~~~~ 184 (290)
.+..+||+=+|||.+++.+... +.+++.+|.++...+..++|... .+++++..|... +. -+..+||+|++.--
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 3466899999999999999884 68999999999999999999764 458888888632 11 12346999998655
Q ss_pred ccccCCHHHHHHHHHh--ccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 185 IEYWPDPQRGIREAYR--VLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
...-.+.+++++.+.+ .+.|+|.+++--+..... ..+.+.+-|++.|.....++-
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~--------------~~~~~~~~l~~~~~~~l~~el 225 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKA--------------WTEQFLRKMREISSKSVRIEL 225 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHH--------------HHHHHHHHHHHHCSSEEEEEE
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchH--------------HHHHHHHHHHhcCCCeEEEEE
Confidence 5433455667766665 456899998876554332 124555666666765555544
No 305
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.18 E-value=0.018 Score=50.28 Aligned_cols=147 Identities=12% Similarity=0.091 Sum_probs=96.8
Q ss_pred CCCEEEEEcCccchhHHHHHhh-CCCCeEEEEeCCHHHHHHHhhhC--------------------------CCCCceEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE--------------------------PLKECKIV 162 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~--------------------------~~~~v~~~ 162 (290)
+...|+-+|||.=.....+... .++..++=+|. |+.++.=++.. ...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4578999999987776666553 24678888888 66555322211 13456788
Q ss_pred EcCCCCC----------CCCCCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHh--
Q 022929 163 EGDAEDL----------PFPTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVW-- 228 (290)
Q Consensus 163 ~~d~~~l----------~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~-- 228 (290)
..|+.+. .+..+..-++++-.++.|++.. .++++.+..... +|.+++.++..+.....+.+....
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~fg~~M~~~l~~ 247 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDRFGQIMIENLRR 247 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSHHHHHHHHHHHT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCHHHHHHHHHHHH
Confidence 8898663 1333446688899999999754 468888887765 555555565544333332222111
Q ss_pred --------hcCCCHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 229 --------MLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 229 --------~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
..|++.++..+.|.++||+.+++.++..-|
T Consensus 248 ~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~ 285 (334)
T 3iei_A 248 RQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELY 285 (334)
T ss_dssp TTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHHHHH
T ss_pred hCCCCcccccCCCHHHHHHHHHHcCCCcceeecHHHHH
Confidence 134688999999999999998888776544
No 306
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.00 E-value=0.0051 Score=53.21 Aligned_cols=140 Identities=14% Similarity=0.221 Sum_probs=93.3
Q ss_pred CEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC------CCCceEEEcCCCCCC---------CCCCCc
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------LKECKIVEGDAEDLP---------FPTDYA 176 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~v~~~~~d~~~l~---------~~~~~~ 176 (290)
..|+++|||-=.....+.. .++.+++-+|. |++++..++... ..+..++..|+.+ . +.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 5799999997655444431 12478999995 998888776642 3457788899876 3 222335
Q ss_pred cEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCCc-hh---Hh----hhhHHH----------hhcCCC-HH
Q 022929 177 DRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYPT-FW---LS----RYFADV----------WMLFPK-EE 235 (290)
Q Consensus 177 D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~-~~---~~----~~~~~~----------~~~~~~-~~ 235 (290)
-++++..+++|++.. ..+++.+...+.||+.+++....... .. .. ..+... ...+.+ .+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 578889999999764 46899999988999998887544321 11 01 111111 111235 78
Q ss_pred HHHHHHHHCCCcEEEEEEcC
Q 022929 236 EYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 236 ~~~~ll~~aGf~~v~~~~~~ 255 (290)
++.+.|.+.||+.+ .....
T Consensus 261 ~~~~~f~~~G~~~~-~~~~~ 279 (310)
T 2uyo_A 261 VVADWLNRHGWRAT-AQSAP 279 (310)
T ss_dssp CHHHHHTTTTEEEE-EEEHH
T ss_pred HHHHHHHHCcCccc-cCCHH
Confidence 99999999999988 55543
No 307
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.00 E-value=0.0023 Score=54.31 Aligned_cols=114 Identities=13% Similarity=0.002 Sum_probs=71.1
Q ss_pred CCCEEEEEcC------ccchhHHHHHhhCCC-CeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEec
Q 022929 110 RNMLVVDVGG------GTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~------G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~ 182 (290)
.+.+|||+|+ -+|.. .+++..|. ..++++|+.+-.. ..+ .++++|...+.. .++||+|+|.
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s--------da~-~~IqGD~~~~~~-~~k~DLVISD 176 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS--------DAD-STLIGDCATVHT-ANKWDLIISD 176 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC--------SSS-EEEESCGGGEEE-SSCEEEEEEC
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc--------CCC-eEEEcccccccc-CCCCCEEEec
Confidence 6899999997 45653 33444554 5999999954321 112 458999765433 4679999994
Q ss_pred Cccc---c--cCC------HHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 183 GSIE---Y--WPD------PQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 183 ~~l~---~--~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
..-. + .+. -+..+.-+.+.|+|||.+++-.+-... .+.+.++. + -|+.+++
T Consensus 177 MAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg----------------~~~L~~lr-k-~F~~VK~ 238 (344)
T 3r24_A 177 MYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW----------------NADLYKLM-G-HFSWWTA 238 (344)
T ss_dssp CCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC----------------CHHHHHHH-T-TEEEEEE
T ss_pred CCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC----------------HHHHHHHH-h-hCCeEEE
Confidence 3321 1 111 235667788999999999986443321 13344444 3 7887777
Q ss_pred EE
Q 022929 252 KR 253 (290)
Q Consensus 252 ~~ 253 (290)
..
T Consensus 239 fK 240 (344)
T 3r24_A 239 FV 240 (344)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.93 E-value=0.026 Score=50.11 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=80.4
Q ss_pred CEEEEEcCccchhHHHHHhhCCCC-eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC--------CCCCccEEEec
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF--------PTDYADRYVSA 182 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~--------~~~~~D~i~~~ 182 (290)
.+++|+-||.|.++..+... +. .+.++|+++.+.+..+.|.. +..++++|+.++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~--~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP--RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT--TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC--CCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 57999999999999999887 44 46799999999999998864 56788889877631 23469999874
Q ss_pred Cccccc--------CCHH-HHHH---HHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEE
Q 022929 183 GSIEYW--------PDPQ-RGIR---EAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQ 250 (290)
Q Consensus 183 ~~l~~~--------~~~~-~~l~---~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 250 (290)
---..+ .++. .++. ++...++|.- ++.+....-..... .. ..+.+. .|++.||.+..
T Consensus 79 pPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~--~v~ENV~gl~s~~~--~~------~~~~i~-~l~~~GY~v~~ 147 (376)
T 3g7u_A 79 PPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLF--FLAENVPGIMQEKY--SG------IRNKAF-NLVSGDYDILD 147 (376)
T ss_dssp CCCCTTC-------CHHHHHHHHHHHHHHHHHCCSE--EEEEECTTTTCGGG--HH------HHHHHH-HHHHTTEEECC
T ss_pred CCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCE--EEEecchHhhccCc--HH------HHHHHH-HHHcCCCccCc
Confidence 322211 1222 2333 3444556743 33333322111000 00 235667 88999997634
Q ss_pred EEEcCc
Q 022929 251 LKRIGP 256 (290)
Q Consensus 251 ~~~~~~ 256 (290)
...+..
T Consensus 148 ~~vl~a 153 (376)
T 3g7u_A 148 PIKVKA 153 (376)
T ss_dssp CEEEEG
T ss_pred EEEEEH
Confidence 444443
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.75 E-value=0.019 Score=50.33 Aligned_cols=131 Identities=14% Similarity=0.110 Sum_probs=79.3
Q ss_pred CEEEEEcCccchhHHHHHhhCC-CCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC---CCCCccEEEecCcccc
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF---PTDYADRYVSAGSIEY 187 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~---~~~~~D~i~~~~~l~~ 187 (290)
.+|+|+.||.|.++..+...-- ...++++|+++.+++..+.|.. +..++.+|+.++.. +...+|+++...--..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~--~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~ 80 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP--HTQLLAKTIEGITLEEFDRLSFDMILMSPPCQP 80 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--TSCEECSCGGGCCHHHHHHHCCSEEEECCC---
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc--ccccccCCHHHccHhHcCcCCcCEEEEcCCCcc
Confidence 5799999999999999988710 1368999999999999999975 44577888877541 1114899987432111
Q ss_pred c---------CCHH-HHHHH---HHhccC--CCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 022929 188 W---------PDPQ-RGIRE---AYRVLK--LGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLK 252 (290)
Q Consensus 188 ~---------~~~~-~~l~~---~~~~L~--pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 252 (290)
+ .+.. .++.+ +...++ |. +++.+....-.. . .+.+.+.+.|++.||.+. ..
T Consensus 81 fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~~-~----------~~~~~i~~~l~~~GY~v~-~~ 146 (343)
T 1g55_A 81 FTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFEV-S----------STRDLLIQTIENCGFQYQ-EF 146 (343)
T ss_dssp ---------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGGG-S----------HHHHHHHHHHHHTTEEEE-EE
T ss_pred hhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCccccC-H----------HHHHHHHHHHHHCCCeeE-EE
Confidence 1 1222 23343 334444 54 333333222110 0 034678889999999754 44
Q ss_pred EcCccc
Q 022929 253 RIGPKW 258 (290)
Q Consensus 253 ~~~~~~ 258 (290)
.+....
T Consensus 147 vl~a~~ 152 (343)
T 1g55_A 147 LLSPTS 152 (343)
T ss_dssp EECGGG
T ss_pred EEEHHH
Confidence 455443
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.71 E-value=0.045 Score=47.63 Aligned_cols=150 Identities=12% Similarity=0.046 Sum_probs=89.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-CCCeE-EEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC---CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-DAKNV-TILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v-~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---~~~~~~D~i~~~~~ 184 (290)
...+++|+-||.|.+...+...- +...+ .++|+++.+.+..+.|.... ++..|+.++. ++...+|+++...-
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~---~~~~DI~~~~~~~i~~~~~Dil~ggpP 85 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE---VQVKNLDSISIKQIESLNCNTWFMSPP 85 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC---CBCCCTTTCCHHHHHHTCCCEEEECCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC---cccCChhhcCHHHhccCCCCEEEecCC
Confidence 45689999999999999988761 11346 69999999999998886532 5678887764 22225899986422
Q ss_pred ccc-----------cCCHH-HHHHHHHh-ccCC---CCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcE
Q 022929 185 IEY-----------WPDPQ-RGIREAYR-VLKL---GGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKD 248 (290)
Q Consensus 185 l~~-----------~~~~~-~~l~~~~~-~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 248 (290)
-.. ..+.. .++.++.+ +++. .-.+++.+....-.. . .+.+.+.+.|++.||.+
T Consensus 86 CQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~-~----------~~~~~i~~~l~~~GY~v 154 (327)
T 3qv2_A 86 CQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE-S----------LVFKEIYNILIKNQYYI 154 (327)
T ss_dssp CTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG-S----------HHHHHHHHHHHHTTCEE
T ss_pred ccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC-h----------HHHHHHHHHHHhCCCEE
Confidence 221 12333 45566666 5532 134445544332110 0 13467888999999974
Q ss_pred EEEEEcCcccccccccccceeeeEEEEec
Q 022929 249 VQLKRIGPKWYRGVRRHGLIMGCSVTGVK 277 (290)
Q Consensus 249 v~~~~~~~~~~~~~~~~~~~~~~~~~a~k 277 (290)
....+....+ ++.+...-+ .++|.+
T Consensus 155 -~~~vl~a~~y-GvPQ~R~R~--fivg~r 179 (327)
T 3qv2_A 155 -KDIICSPIDI-GIPNSRTRY--YVMARL 179 (327)
T ss_dssp -EEEEECGGGG-TCSBCCCEE--EEEEES
T ss_pred -EEEEEeHHHc-CCCccceEE--EEEEEe
Confidence 4445554433 333333322 445543
No 311
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.07 E-value=0.08 Score=46.13 Aligned_cols=147 Identities=15% Similarity=0.115 Sum_probs=87.0
Q ss_pred CEEEEEcCccchhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC---CCCCCccEEEecCccc-
Q 022929 112 MLVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---FPTDYADRYVSAGSIE- 186 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---~~~~~~D~i~~~~~l~- 186 (290)
.+++|+-||.|.+...+...- +...+.++|+++.+.+.-+.|.. ...++..|+.++. ++...+|+++...--.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~--~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP--ETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQP 81 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--TSCEECCCGGGCCHHHHHHTTCCEEEECCCCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC--CCceeccccccCCHHHhccCCCCEEEecCCCcc
Confidence 479999999999999998771 11457899999999999998875 3456778887654 2222589998632111
Q ss_pred --------ccCCHH-HHHHHHHhc---cC-CCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 187 --------YWPDPQ-RGIREAYRV---LK-LGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 187 --------~~~~~~-~~l~~~~~~---L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
...+.. .++.++.++ ++ | .+++.+....-.. .. ..+.+.+.|++.||.+. ...
T Consensus 82 fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~-~~----------~~~~i~~~l~~~GY~v~-~~v 147 (333)
T 4h0n_A 82 FTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFEN-ST----------VRNLFIDKLKECNFIYQ-EFL 147 (333)
T ss_dssp SEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGG-SH----------HHHHHHHHHHHTTEEEE-EEE
T ss_pred hhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhh-hh----------HHHHHHHHHHhCCCeEE-EEE
Confidence 112222 233333333 44 4 4445544433211 00 24678899999999754 444
Q ss_pred cCcccccccccccceeeeEEEEec
Q 022929 254 IGPKWYRGVRRHGLIMGCSVTGVK 277 (290)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~a~k 277 (290)
+....+ ++.+...-+ .++|.+
T Consensus 148 l~a~~~-GvPQ~R~R~--fiva~r 168 (333)
T 4h0n_A 148 LCPSTV-GVPNSRLRY--YCTARR 168 (333)
T ss_dssp ECTTTT-TCSCCCCEE--EEEEEE
T ss_pred ecHHHc-CCCccceEE--EEEEEe
Confidence 554333 233333322 455544
No 312
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.05 E-value=0.23 Score=43.04 Aligned_cols=132 Identities=13% Similarity=-0.004 Sum_probs=77.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCC-CCCccEEEecCcccc-
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP-TDYADRYVSAGSIEY- 187 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~-~~~~D~i~~~~~l~~- 187 (290)
.+.+++|+.||.|.++..+... +...+.++|+++.+++..+.+..... .+|+.++... -..+|+|+...--..
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~~----~~Di~~~~~~~~~~~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEKP----EGDITQVNEKTIPDHDILCAGFPCQAF 84 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCCC----BSCGGGSCGGGSCCCSEEEEECCCTTT
T ss_pred CCCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCCC----cCCHHHcCHhhCCCCCEEEECCCCCCc
Confidence 3578999999999999999877 23457889999999999998864321 5777654311 124899987321111
Q ss_pred --------cCCHH-HHH---HHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 188 --------WPDPQ-RGI---REAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 188 --------~~~~~-~~l---~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
..++. .++ -++.+.++|. +++.+....-..... . ...+.+.+.|++.||.+. ...+.
T Consensus 85 S~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~~~--~------~~~~~i~~~l~~~GY~v~-~~vl~ 153 (327)
T 2c7p_A 85 SISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASHDN--G------NTLEVVKNTMNELDYSFH-AKVLN 153 (327)
T ss_dssp CTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTGGG--G------HHHHHHHHHHHHTTBCCE-EEEEE
T ss_pred chhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhccc--c------HHHHHHHHHHHhCCCEEE-EEEEE
Confidence 11222 122 2334445774 333333322110000 0 024678889999999754 44444
Q ss_pred cc
Q 022929 256 PK 257 (290)
Q Consensus 256 ~~ 257 (290)
..
T Consensus 154 a~ 155 (327)
T 2c7p_A 154 AL 155 (327)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.03 E-value=0.02 Score=55.05 Aligned_cols=127 Identities=20% Similarity=0.277 Sum_probs=82.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-------C-----CCeEEEEeC---CHHHHHHHhhhC--------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-------D-----AKNVTILDQ---SPHQLAKAKQKE-------------------- 154 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-------~-----~~~v~~vD~---s~~~~~~a~~~~-------------------- 154 (290)
+.-+|+|+|.|+|.....+.+.+ | ..+++.+|. +.+.+..+....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45799999999999777665532 1 167999998 666665543211
Q ss_pred ------CCC--CceEEEcCCCC-CC-CC---CCCccEEEecCcccccCCH----HHHHHHHHhccCCCCEEEEEccCCCc
Q 022929 155 ------PLK--ECKIVEGDAED-LP-FP---TDYADRYVSAGSIEYWPDP----QRGIREAYRVLKLGGKACIIGPVYPT 217 (290)
Q Consensus 155 ------~~~--~v~~~~~d~~~-l~-~~---~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~ 217 (290)
... .++++.+|+.+ ++ +. ...+|+++....-- -.++ ..++..+.++++|||.+..-.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-AKNPDMWNEQLFNAMARMTRPGGTFSTFT----- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-CCChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 011 25567777732 22 21 35799999744211 1122 579999999999999875321
Q ss_pred hhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcc
Q 022929 218 FWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 257 (290)
....++..|.++||.+......+..
T Consensus 212 ---------------~~~~vr~~l~~aGf~~~~~~~~~~k 236 (689)
T 3pvc_A 212 ---------------AAGFVRRGLQQAGFNVTKVKGFGQK 236 (689)
T ss_dssp ---------------CCHHHHHHHHHTTCEEEEEECSSSS
T ss_pred ---------------CcHHHHHHHHhCCeEEEeccCCCcc
Confidence 2357888999999998887765543
No 314
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.98 E-value=0.021 Score=51.08 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-C------CCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-P------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-~------~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++.. .+.+..+-.+. . .....+|+|+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG----a~~i~~~~~~~~~~~~~~~~~g~g~Dvvi 259 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG----FETIDLRNSAPLRDQIDQILGKPEVDCGV 259 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT----CEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC----CcEEcCCCcchHHHHHHHHhCCCCCCEEE
Confidence 4889999999986 888888888763339999999999999988542 23332221111 0 1122599998
Q ss_pred ecCccccc--------CCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 181 SAGSIEYW--------PDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 181 ~~~~l~~~--------~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
-...-... ..+...++.+.++|+++|.+++....
T Consensus 260 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 260 DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 65433210 01234688899999999999876543
No 315
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.86 E-value=0.017 Score=55.31 Aligned_cols=126 Identities=21% Similarity=0.257 Sum_probs=81.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-------C-----CCeEEEEeC---CHHHHHHHhhhC--------------CC----
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-------D-----AKNVTILDQ---SPHQLAKAKQKE--------------PL---- 156 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-------~-----~~~v~~vD~---s~~~~~~a~~~~--------------~~---- 156 (290)
+.-+|+|+|-|+|.......+.. | ..+++++|. +.+.+..+.... ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44689999999998776654432 1 257999998 887777544321 10
Q ss_pred ----------CCceEEEcCCCC-CC-CC---CCCccEEEecCcccccCCH----HHHHHHHHhccCCCCEEEEEccCCCc
Q 022929 157 ----------KECKIVEGDAED-LP-FP---TDYADRYVSAGSIEYWPDP----QRGIREAYRVLKLGGKACIIGPVYPT 217 (290)
Q Consensus 157 ----------~~v~~~~~d~~~-l~-~~---~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~ 217 (290)
-.+++..+|+.+ ++ +. ...||+++... +..-.++ ..+++.+.++++|||.+....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFT----- 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 113355666632 22 11 35699998743 2222233 479999999999999875422
Q ss_pred hhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCc
Q 022929 218 FWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGP 256 (290)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 256 (290)
....++..|.++||.+......+.
T Consensus 220 ---------------~~~~vr~~L~~aGf~v~~~~~~g~ 243 (676)
T 3ps9_A 220 ---------------SAGFVRRGLQDAGFTMQKRKGFGR 243 (676)
T ss_dssp ---------------CCHHHHHHHHHHTCEEEEEECSTT
T ss_pred ---------------CcHHHHHHHHhCCeEEEecccccc
Confidence 235678889999999887765553
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.85 E-value=0.055 Score=48.21 Aligned_cols=101 Identities=24% Similarity=0.268 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC-CC------CCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~-l~------~~~~~~D~i~ 180 (290)
+++++||-+|+|. |.++..+++..+..+|+++|.+++-++.+++... +.+..+-.+ +. .....+|+|+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF----EIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----EEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC----cEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 4789999999986 8888999988744489999999999999976432 323221111 00 1123599998
Q ss_pred ecCccc---------ccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIE---------YWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~---------~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-.-... +.+++...++...++|+++|.+++...
T Consensus 260 d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 654321 223445678899999999999987653
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.82 E-value=0.033 Score=49.21 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-----CCCCCCccEEEec
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-----PFPTDYADRYVSA 182 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-----~~~~~~~D~i~~~ 182 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+-.++ ....+.+|+|+-.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~~~~~gg~D~vid~ 265 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-T--HVINSKTQDPVAAIKEITDGGVNFALES 265 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-C--EEecCCccCHHHHHHHhcCCCCcEEEEC
Confidence 4789999999986 8888888887643479999999999999886532 1 1222211111 0112259999854
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
... ...++...+.|+++|.+++...
T Consensus 266 ~g~------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 266 TGS------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp SCC------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCC------HHHHHHHHHHHhcCCEEEEeCC
Confidence 321 3567889999999999988654
No 318
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.74 E-value=0.019 Score=49.88 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=49.3
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
+....+...++.... .+++.|||.-||+|..+....+. +.+++|+|+++...+.++++..
T Consensus 236 ~kp~~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 236 RFPAKLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp CCCTHHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGS
T ss_pred cCCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHH
Confidence 344566666665543 47899999999999999988887 7899999999999999998865
No 319
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.62 E-value=0.067 Score=46.96 Aligned_cols=98 Identities=21% Similarity=0.176 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCC--CC------CCCCCCccEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAE--DL------PFPTDYADRY 179 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~--~l------~~~~~~~D~i 179 (290)
+++++||-+|+|. |..+..+++..+...|+++|.+++-++.+++. ...-+.+...+.. ++ ......+|+|
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 3789999999986 88888999887433499999999999999887 3222222211110 00 0123469999
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+-... ....++.+.++|+++|.+++...
T Consensus 257 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred EECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 85432 13467888999999999998754
No 320
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.56 E-value=0.014 Score=52.45 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCccchhHHHHH-hhCCC-CeEEEEeCCHHHHHHHhhhC
Q 022929 109 NRNMLVVDVGGGTGFTTLGIV-KHVDA-KNVTILDQSPHQLAKAKQKE 154 (290)
Q Consensus 109 ~~~~~vLDiG~G~G~~~~~l~-~~~~~-~~v~~vD~s~~~~~~a~~~~ 154 (290)
.++..|+|||++.|..+..++ +..+. .+|+++|+++...+..+++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~ 272 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVL 272 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 478999999999999999888 55443 79999999999999888764
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.31 E-value=0.1 Score=46.09 Aligned_cols=97 Identities=20% Similarity=0.317 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC--------CCCCCCccEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL--------PFPTDYADRY 179 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l--------~~~~~~~D~i 179 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++..+.+++.... ..+..+-.++ ....+.+|+|
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---~vi~~~~~~~~~~i~~~~~~~~gg~Dvv 257 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT---ATVDPSAGDVVEAIAGPVGLVPGGVDVV 257 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS---EEECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC---EEECCCCcCHHHHHHhhhhccCCCCCEE
Confidence 3789999999986 88888888887444999999999999988875321 1121111110 0223369999
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
+-... ....++.+.++|+++|.+++....
T Consensus 258 id~~G------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 258 IECAG------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp EECSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EECCC------CHHHHHHHHHHhccCCEEEEEecc
Confidence 85432 135678899999999999887543
No 322
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.25 E-value=0.031 Score=48.46 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=50.0
Q ss_pred cccHHHHHhhccccCCCCCCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCH---HHHHHHhhhCC
Q 022929 92 HWTEDMRDDALEPADLSNRNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP---HQLAKAKQKEP 155 (290)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~---~~~~~a~~~~~ 155 (290)
+....+...++.... .+++.|||.-||+|..+..+.+. +.+++|+|+++ ...+.++++..
T Consensus 226 ~kp~~l~~~~i~~~~--~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 226 QKPAAVIERLVRALS--HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CCCHHHHHHHHHHHS--CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHhC--CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHH
Confidence 445667777776543 47899999999999999999888 78999999999 99999998865
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.25 E-value=0.0078 Score=52.57 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--C--CCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--F--PTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--~--~~~~~D~i~~~~ 183 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. . ..+.+|+++-..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGA-E--VAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCC-C--EEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 4889999999986 88999999887 6799999999999999886532 1 12221111110 0 012588887543
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
. ....++.+.+.|+++|.+++....
T Consensus 241 g------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 241 V------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp C------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred C------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 2 235778899999999999887543
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.22 E-value=0.12 Score=41.05 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=61.5
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||.+|+ |.|..+..++... +.+|+++|.+++..+.+++.. .... .|..+.. .....+|+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g----~~~~-~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLG----VEYV-GDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTC----CSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcC----CCEE-eeCCcHHHHHHHHHHhCCCCCeE
Confidence 37899999994 4566666666654 679999999998887776532 1111 1332211 12235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+.. ...++.+.+.|+++|.++....
T Consensus 111 vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 111 VLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred EEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 986532 1467888999999999988643
No 325
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.15 E-value=0.082 Score=46.34 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC---CC----C-CCCCCCccEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA---ED----L-PFPTDYADRY 179 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~---~~----l-~~~~~~~D~i 179 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+- .+ + ......+|+|
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~~i~~~~~~g~D~v 246 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-D--LVLQISKESPQEIARKVEGQLGCKPEVT 246 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-S--EEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-C--EEEcCcccccchHHHHHHHHhCCCCCEE
Confidence 3789999999986 8888888888643389999999999998886432 1 2222210 00 0 0001359999
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+-... ....++...++|+++|.+++...
T Consensus 247 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 247 IECTG------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EECCC------ChHHHHHHHHHhcCCCEEEEEec
Confidence 85432 12467888899999999988754
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.05 E-value=0.19 Score=43.92 Aligned_cols=95 Identities=18% Similarity=0.260 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC-CCCC------CC---CCCcc
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA-EDLP------FP---TDYAD 177 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~-~~l~------~~---~~~~D 177 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++... . ..+..+- .++. .. ...+|
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGA-D--VTLVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC-S--EEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCC-C--EEEcCcccccHHHHHHHHhccccCCCCC
Confidence 3789999999985 78888888876 5679999999999998886432 1 2222110 1110 11 23599
Q ss_pred EEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 178 RYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 178 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+|+-.... ...++...+.|+++|.+++...
T Consensus 243 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSGN------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEEECSCC------HHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 99854321 2467888899999999988754
No 327
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.04 E-value=0.12 Score=45.52 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=64.9
Q ss_pred CCCEEEEEc-Ccc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-----CCCCCCccEEEec
Q 022929 110 RNMLVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-----PFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-----~~~~~~~D~i~~~ 182 (290)
++.+||-+| +|. |..+..+++...+.+|+++|.+++-++.+++... . .++..+ .++ ....+.+|+|+-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa-d--~vi~~~-~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA-H--HVIDHS-KPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC-S--EEECTT-SCHHHHHHTTCSCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC-C--EEEeCC-CCHHHHHHHhcCCCceEEEEC
Confidence 678999998 664 8888999887557899999999999998876432 1 111111 110 1233469998853
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.. ....++.+.++|+++|.+++..
T Consensus 247 ~g------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 247 TH------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp SC------HHHHHHHHHHHSCTTCEEEECS
T ss_pred CC------chhhHHHHHHHhcCCCEEEEEC
Confidence 22 2357788999999999998874
No 328
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.03 E-value=0.026 Score=49.38 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++-.+.+++... . ..+ .+... +.. .+|+|+-...-.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~v~-~~~~~--~~~-~~D~vid~~g~~- 245 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGV-K--HFY-TDPKQ--CKE-ELDFIISTIPTH- 245 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTC-S--EEE-SSGGG--CCS-CEEEEEECCCSC-
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCC-C--eec-CCHHH--Hhc-CCCEEEECCCcH-
Confidence 4889999999986 88888888886 5799999999998888886432 2 122 33222 222 599998543221
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
..++...+.|+++|.+++.....
T Consensus 246 -----~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 246 -----YDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp -----CCHHHHHTTEEEEEEEEECCCCC
T ss_pred -----HHHHHHHHHHhcCCEEEEECCCC
Confidence 24678889999999999875443
No 329
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.01 E-value=0.24 Score=44.11 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
+++.+||-+|+|. |..+..+++..+..+|+++|.+++-++.+++... . ..+..+-.++. .....+|+|+-
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA-D--HVIDPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-S--EEECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-C--EEEcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 4889999999985 8888888888743499999999999999987632 1 12211111110 12335999985
Q ss_pred cCcccccCCHHHHHHHHHhcc----CCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVL----KLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L----~pgG~l~i~~~~ 214 (290)
.- ......+..+.+.| +++|.+++....
T Consensus 289 ~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 289 AT-----GVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 32 23333445555555 999999987644
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.89 E-value=0.077 Score=46.40 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++.... .++..+-.++. .....+|+|+-
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT---DIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC---EEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc---eEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 4789999999986 88888888886434899999999999988876431 12211111110 12335999985
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
...- ...++.+.+.|+++|.++.....
T Consensus 242 ~~g~------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 242 AGGD------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp CSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCC------hHHHHHHHHHHhcCCEEEEeccc
Confidence 4322 13678889999999999887543
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.85 E-value=0.13 Score=45.24 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++... . ..+..+-.++. .....+|+|+-
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGA-D--HGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCC-C--EEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 4889999999886 88888888886 6799999999999998887532 1 22221111110 12336999986
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
...- ..++.+.+.|+++|.+++....
T Consensus 264 ~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 264 IAGG-------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp ETTS-------SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCh-------HHHHHHHHHhhcCCEEEEEecC
Confidence 5431 2467788899999999987543
No 332
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.79 E-value=0.068 Score=46.57 Aligned_cols=96 Identities=22% Similarity=0.249 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
+++.+||-+|+|. |..+..+++..++.+|+++|.+++-++.+++... . ..+..+- ++. .....+|+|+-
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-~--~~i~~~~-~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-D--AAVKSGA-GAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-S--EEEECST-THHHHHHHHHGGGCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-C--EEEcCCC-cHHHHHHHHhCCCCCeEEEE
Confidence 4889999999986 8888888888767899999999999999986532 1 1222211 110 11225999885
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
.-. ....++.+.+.|+++|.+++....
T Consensus 246 ~~G------~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 246 FVG------AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp SSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCC------CHHHHHHHHHHHhcCCEEEEECCC
Confidence 432 134788899999999999887543
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.59 E-value=0.39 Score=46.07 Aligned_cols=146 Identities=15% Similarity=0.198 Sum_probs=91.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC--------CCeEEEEeCCHHHHHHHhhhCC--------------------------
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD--------AKNVTILDQSPHQLAKAKQKEP-------------------------- 155 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~--------~~~v~~vD~s~~~~~~a~~~~~-------------------------- 155 (290)
+...|+-+|||.=.....+....+ +..++=+|. ++.++.=++...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 457899999998777777765533 456777777 554433222110
Q ss_pred -CCCceEEEcCCCCCC----------C-CCCCccEEEecCcccccCCH--HHHHHHHHhccCCCCEEEEEccCCC---ch
Q 022929 156 -LKECKIVEGDAEDLP----------F-PTDYADRYVSAGSIEYWPDP--QRGIREAYRVLKLGGKACIIGPVYP---TF 218 (290)
Q Consensus 156 -~~~v~~~~~d~~~l~----------~-~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~---~~ 218 (290)
..+..++..|+.+.. + .....-++++-.++.|++.. .++++.+.+. ++|.+++.+...+ ..
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 025678888997631 2 33345578888999999754 4688888754 5777666554433 11
Q ss_pred hHhhhhH-HH---------hhcCCCHHHHHHHHHHCCCcEEEEEEcCccc
Q 022929 219 WLSRYFA-DV---------WMLFPKEEEYIEWFQKAGFKDVQLKRIGPKW 258 (290)
Q Consensus 219 ~~~~~~~-~~---------~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 258 (290)
...+.+. .. ...+++.++..+.|.++||+.+...++...|
T Consensus 264 ~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~~y 313 (695)
T 2zwa_A 264 PFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQLW 313 (695)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHHHH
Confidence 1111111 11 1135689999999999999988877765433
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.51 E-value=0.02 Score=50.70 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC----CCCCCCCCCCccEEEecC
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD----AEDLPFPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d----~~~l~~~~~~~D~i~~~~ 183 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++... . .++..+ ...+ . +.+|+|+-..
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~--~-~g~Dvvid~~ 265 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGA-D--EVVNSRNADEMAAH--L-KSFDFILNTV 265 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTC-S--EEEETTCHHHHHTT--T-TCEEEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-c--EEeccccHHHHHHh--h-cCCCEEEECC
Confidence 4789999999985 88888888876 6789999999998888886432 1 122111 1111 1 3599998643
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.-. ..++...+.|+++|.++....
T Consensus 266 g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 266 AAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCH------HHHHHHHHHhccCCEEEEecc
Confidence 321 235678899999999987654
No 335
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.48 E-value=0.11 Score=43.44 Aligned_cols=125 Identities=10% Similarity=0.033 Sum_probs=80.2
Q ss_pred CCEEEEEcCccchhHHHHHhh-------CCCCeEEEEe-----CCH----------------------HHHHHH---hhh
Q 022929 111 NMLVVDVGGGTGFTTLGIVKH-------VDAKNVTILD-----QSP----------------------HQLAKA---KQK 153 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~-------~~~~~v~~vD-----~s~----------------------~~~~~a---~~~ 153 (290)
+..|+|+|+-.|..+..++.. .+..+++++| +.+ +.+... .++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 468999999999988776542 2458999999 321 112211 111
Q ss_pred ---CC--CCCceEEEcCCCC-CC-----CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhh
Q 022929 154 ---EP--LKECKIVEGDAED-LP-----FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSR 222 (290)
Q Consensus 154 ---~~--~~~v~~~~~d~~~-l~-----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 222 (290)
.. ..+++++.+++.+ +| .+..++|+++.-.-. -......++.+...|+|||.+++-+...+.+. .
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~-G- 225 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELDNPKWP-G- 225 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTTCTTCT-H-
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCCCCCCh-H-
Confidence 22 2679999999843 22 234569999976532 12234578899999999999988775433221 0
Q ss_pred hhHHHhhcCCCHHHHHHHHHHCCCcEE
Q 022929 223 YFADVWMLFPKEEEYIEWFQKAGFKDV 249 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~ll~~aGf~~v 249 (290)
..+.|.+.+++.|.++.
T Consensus 226 ----------~~~A~~ef~~~~~~~i~ 242 (257)
T 3tos_A 226 ----------ENIAMRKVLGLDHAPLR 242 (257)
T ss_dssp ----------HHHHHHHHTCTTSSCCE
T ss_pred ----------HHHHHHHHHhhCCCeEE
Confidence 13567778787777644
No 336
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.30 E-value=0.065 Score=46.68 Aligned_cols=97 Identities=16% Similarity=0.086 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC------CCCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL------PFPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l------~~~~~~~D~i~~ 181 (290)
+++++||=+|+|. |..+..+++...+.+|+++|.+++-++.+++.... ..+...-.+. -.....+|.++.
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~---~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD---VTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS---EEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe---EEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 4889999999986 55666667766689999999999988888865431 1221111110 012234676664
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
... ....+....+.|+++|.+++....
T Consensus 239 ~~~------~~~~~~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 239 CAV------ARIAFEQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp CCS------CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred ecc------CcchhheeheeecCCceEEEEecc
Confidence 332 235678889999999999887543
No 337
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.24 E-value=0.061 Score=46.83 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
.++++||=+|+|. |.++..+++..+...++++|.+++-++.+++.... ..+..+-.+.+ .....+|+|+-
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~---~~i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM---QTFNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS---EEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe---EEEeCCCCCHHHHHHhhcccCCcccccc
Confidence 3789999999985 77788888887666789999999999999875321 22222111110 11234788775
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
... ....++...++|+++|.+++.....
T Consensus 236 ~~G------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 236 TAG------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp CSC------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ccc------ccchhhhhhheecCCeEEEEEeccC
Confidence 432 2356788899999999998876543
No 338
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.20 E-value=0.064 Score=46.09 Aligned_cols=88 Identities=15% Similarity=0.097 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
+++++||-+|+|. |..+..+++.. +.+|++++ +++-.+.+++... +.+..|...+ .+.+|+|+-.-.-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa----~~v~~d~~~v---~~g~Dvv~d~~g~-- 209 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGV----RHLYREPSQV---TQKYFAIFDAVNS-- 209 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTE----EEEESSGGGC---CSCEEEEECC-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCC----CEEEcCHHHh---CCCccEEEECCCc--
Confidence 4889999999974 88888888886 56999999 8888888876532 2222242222 4569999853221
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
..+....++|+++|.++...
T Consensus 210 -----~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 -----QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ---------TTGGGEEEEEEEEEEC
T ss_pred -----hhHHHHHHHhcCCCEEEEEe
Confidence 12356789999999998874
No 339
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.97 E-value=0.22 Score=43.18 Aligned_cols=94 Identities=19% Similarity=0.228 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCC------CCccEEEe
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPT------DYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~------~~~D~i~~ 181 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++... +.. .|..+..+.+ +.+|+|+.
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa----~~~-~d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGA----DLV-VNPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTC----SEE-ECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCC----CEE-ecCCCccHHHHHHHHhCCCCEEEE
Confidence 4789999999974 77888888876 5799999999999988875321 111 2332211100 35899886
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
.... ...++...+.|+++|.++.....
T Consensus 237 ~~g~------~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 237 TAVS------KPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp SSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCC------HHHHHHHHHHhhcCCEEEEeccc
Confidence 4331 24678888999999999886543
No 340
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.94 E-value=1.2 Score=38.31 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=80.2
Q ss_pred CEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCC-CCCccEEEecCcc-----
Q 022929 112 MLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFP-TDYADRYVSAGSI----- 185 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~-~~~~D~i~~~~~l----- 185 (290)
.+|||+-||.|.+..-+.+. +...+.++|+++.+.+.-+.|.. ..++.+|+.++... -..+|+++...--
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~---~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ 76 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHS---AKLIKGDISKISSDEFPKCDGIIGGPPSQSWSE 76 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCC---SEEEESCGGGCCGGGSCCCSEEECCCCGGGTEE
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCC---CCcccCChhhCCHhhCCcccEEEecCCCCCcCC
Confidence 36999999999999988776 23456789999999999888874 35778898766411 1248998863211
Q ss_pred ----cccCCHH-HHHH---HHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcCcc
Q 022929 186 ----EYWPDPQ-RGIR---EAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIGPK 257 (290)
Q Consensus 186 ----~~~~~~~-~~l~---~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 257 (290)
....|+. .++. ++.+.++|. +++.+....-.... .-...+.+.+.|++.||.+ +...+...
T Consensus 77 ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~~--------~~~~~~~i~~~l~~~GY~v-~~~vlna~ 145 (331)
T 3ubt_Y 77 GGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQR--------HNKAVQEFIQEFDNAGYDV-HIILLNAN 145 (331)
T ss_dssp TTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGCT--------TSHHHHHHHHHHHHHTEEE-EEEEEEGG
T ss_pred CCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeeccccccc--------ccchhhhhhhhhccCCcEE-EEEecccc
Confidence 1123333 3333 344556775 33444333211000 0012467788899999964 45555544
Q ss_pred c
Q 022929 258 W 258 (290)
Q Consensus 258 ~ 258 (290)
.
T Consensus 146 ~ 146 (331)
T 3ubt_Y 146 D 146 (331)
T ss_dssp G
T ss_pred c
Confidence 3
No 341
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.92 E-value=0.27 Score=43.66 Aligned_cols=76 Identities=13% Similarity=0.231 Sum_probs=47.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhC-------CCCeEEEEeCCHHHHHHHhhhCCCC-CceEEEcCCCCCCCCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV-------DAKNVTILDQSPHQLAKAKQKEPLK-ECKIVEGDAEDLPFPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~-~v~~~~~d~~~l~~~~~~~D~i~~ 181 (290)
..-.|+|+|+|+|.++..+++.. ...+|+.||+|+...+.-++++... ++.+. .++.++|. . .-+|++
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~-~~l~~lp~--~-~~~viA 155 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWH-DSFEDVPE--G-PAVILA 155 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEE-SSGGGSCC--S-SEEEEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEe-CChhhcCC--C-CeEEEe
Confidence 34579999999999988776532 2358999999998887666655322 34433 33344431 1 335555
Q ss_pred cCcccccC
Q 022929 182 AGSIEYWP 189 (290)
Q Consensus 182 ~~~l~~~~ 189 (290)
+.++..+|
T Consensus 156 NE~fDAlP 163 (387)
T 1zkd_A 156 NEYFDVLP 163 (387)
T ss_dssp ESSGGGSC
T ss_pred ccccccCc
Confidence 55554444
No 342
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.90 E-value=0.021 Score=49.96 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=64.5
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEE----cCC-CCCCCCCCCccEEEec
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVE----GDA-EDLPFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~----~d~-~~l~~~~~~~D~i~~~ 182 (290)
++++||-+|+|. |..+..+++.. |+.+|+++|.+++.++.+++... . .++. .|. ..+. ....+|+|+-.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~-~g~g~D~vid~ 245 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA-D--YVSEMKDAESLINKLT-DGLGASIAIDL 245 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC-S--EEECHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC-C--EEeccccchHHHHHhh-cCCCccEEEEC
Confidence 689999999975 77888888775 25789999999999998886532 1 1121 111 1111 12259999865
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
... ...++.+.+.|+++|.++....
T Consensus 246 ~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 246 VGT------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp SCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC------hHHHHHHHHHhhcCCEEEEeCC
Confidence 332 3467888999999999988653
No 343
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.90 E-value=0.31 Score=42.06 Aligned_cols=92 Identities=18% Similarity=0.046 Sum_probs=62.7
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC-CC-------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LP-------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~-l~-------~~~~~~D~ 178 (290)
+++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .. .. ..|..+ .. ...+.+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-g~---~~-~~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI-GF---DA-AFNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TC---SE-EEETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CC---cE-EEecCCHHHHHHHHHHHhCCCCeE
Confidence 47899999998 4577777777765 67999999999888888543 21 11 123322 11 11246999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+... ..++...+.|+++|.+++...
T Consensus 218 vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 218 YFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 9865432 357888899999999987653
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.76 E-value=0.31 Score=42.06 Aligned_cols=94 Identities=15% Similarity=0.157 Sum_probs=64.4
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEE
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~ 180 (290)
+++++||-+|+ | .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. .....+|+++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGA-E--YLINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-c--EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence 47899999994 4 578888888876 6799999999999888876431 1 12222111110 1234599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.+..- ..++.+.+.|+++|.+++...
T Consensus 223 d~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 223 DSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred ECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 65432 357788899999999988653
No 345
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.75 E-value=0.038 Score=48.95 Aligned_cols=96 Identities=19% Similarity=0.195 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC--CCCC-----CCCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD--AEDL-----PFPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d--~~~l-----~~~~~~~D~i~ 180 (290)
+++.+||-+|+|. |..+..+++..+..+|+++|.+++-++.+++... . ..+... -.++ ....+.+|+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~i~~~~~gg~D~vi 268 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-N--EFVNPKDHDKPIQEVIVDLTDGGVDYSF 268 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-C--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-c--EEEccccCchhHHHHHHHhcCCCCCEEE
Confidence 4789999999985 8888888888643489999999999998886432 1 122111 0111 01123699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-... ....++.+.+.|++| |.+++...
T Consensus 269 d~~g------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 269 ECIG------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp ECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCC------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 5432 134678899999997 99988754
No 346
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.72 E-value=1.2 Score=33.05 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=57.9
Q ss_pred CCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCcc
Q 022929 111 NMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGSI 185 (290)
Q Consensus 111 ~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~l 185 (290)
..+|+=+|||. |......+... +..|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|++++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-- 79 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLAHLECAKWLILTI-- 79 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEECC--
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEEC--
Confidence 36799999985 54433333332 6899999999999888875 35678888886532 1223588888642
Q ss_pred cccCCHH--HHHHHHHhccCCCCEEEEE
Q 022929 186 EYWPDPQ--RGIREAYRVLKLGGKACII 211 (290)
Q Consensus 186 ~~~~~~~--~~l~~~~~~L~pgG~l~i~ 211 (290)
++.. ..+-...+.+.|+..++..
T Consensus 80 ---~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 80 ---PNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp ---SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ---CChHHHHHHHHHHHHHCCCCeEEEE
Confidence 2222 2233445666777776654
No 347
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.69 E-value=0.23 Score=42.93 Aligned_cols=95 Identities=12% Similarity=0.060 Sum_probs=64.0
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CCCCCccEEEe
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~~~~~D~i~~ 181 (290)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+.+..... ..+..+-.++. ...+.+|+++.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFD--GAIDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCS--EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCC--EEEECCCHHHHHHHHHhcCCCceEEEE
Confidence 48899999998 3578888888876 679999999999988883333221 11211111110 11245999986
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+..- ..++.+.+.|+++|.+++...
T Consensus 225 ~~g~-------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 225 NVGG-------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp SSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred CCCc-------chHHHHHHHHhhCCEEEEEee
Confidence 4331 368889999999999988643
No 348
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.51 E-value=0.29 Score=42.99 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC-C-CCC-----CCCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD-A-EDL-----PFPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d-~-~~l-----~~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+ . .++ ....+.+|+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-T--ECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-c--EEEecccccchHHHHHHHHhCCCCCEEE
Confidence 4789999999985 8888888887633489999999998888875432 1 122111 0 111 01123699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-.-.. ...++...+.|+++ |.+++...
T Consensus 267 d~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAGR------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ECSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCC------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 54321 34678889999999 99987653
No 349
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.50 E-value=0.28 Score=42.50 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=63.7
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC---CC-----CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED---LP-----FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~---l~-----~~~~~~D~ 178 (290)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++..... ..+ |..+ +. ...+.+|+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~--~~~--d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFD--DAF--NYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCS--EEE--ETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCc--eEE--ecCCHHHHHHHHHHHhCCCCcE
Confidence 47899999997 4578888888776 579999999999888887433221 112 2221 10 11245999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.+... ..++...+.|+++|.+++..
T Consensus 229 vi~~~g~-------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVGG-------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred EEECCCH-------HHHHHHHHHHhcCCEEEEEc
Confidence 9865331 36788899999999998764
No 350
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.42 E-value=0.17 Score=44.75 Aligned_cols=97 Identities=24% Similarity=0.294 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC---CCC----C-C-CCCCCccE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD---AED----L-P-FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d---~~~----l-~-~~~~~~D~ 178 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . .++..+ -.+ + . .....+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~v~~~~~g~g~Dv 270 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-D--LTLNRRETSVEERRKAIMDITHGRGADF 270 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-c--EEEeccccCcchHHHHHHHHhCCCCCcE
Confidence 4789999999875 8888888888632699999999999998885432 1 222221 000 0 0 12235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
|+-.... ...++...++|+++|.+++....
T Consensus 271 vid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 271 ILEATGD------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp EEECSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEECCCC------HHHHHHHHHHHhcCCEEEEEecC
Confidence 9854331 13577888999999999887543
No 351
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.26 E-value=0.33 Score=42.71 Aligned_cols=96 Identities=19% Similarity=0.217 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC-C-CCCC-----CCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD-A-EDLP-----FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d-~-~~l~-----~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+ . .++. ...+.+|+|+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-T--DFVNPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-C--EEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC-c--eEEeccccchhHHHHHHHHhCCCCCEEE
Confidence 4789999999875 8888888888633389999999998888875432 1 122111 0 0110 1113599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-.... ...++.+.++|+++ |.+++...
T Consensus 268 d~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 268 ECVGN------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp ECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCCC------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 54321 34678899999999 99988654
No 352
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.21 E-value=0.065 Score=47.33 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC-C-CCCC-----CCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD-A-EDLP-----FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d-~-~~l~-----~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+ . .++. ...+.+|+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-T--DCLNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-c--EEEccccccchHHHHHHHHhCCCccEEE
Confidence 4789999999885 8888888888743489999999998888875432 1 122111 0 0110 1113599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-...- ...++.+.+.|+++ |.+++...
T Consensus 271 d~~G~------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCAGT------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ESSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCC------HHHHHHHHHHhhcCCCEEEEECC
Confidence 54321 34678899999999 99988654
No 353
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.19 E-value=0.42 Score=42.01 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC--CCC-----CCCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA--EDL-----PFPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~--~~l-----~~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+- .++ ....+.+|+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA-T--ECVNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-c--eEecccccchhHHHHHHHHhCCCCcEEE
Confidence 4789999999886 8888888888633389999999998888875432 1 1221110 111 01123599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-.... ...++...+.|+++ |.+++...
T Consensus 267 d~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIGR------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ECSCC------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred ECCCC------HHHHHHHHHHhhcCCcEEEEecc
Confidence 54321 34678889999999 99988653
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.15 E-value=0.37 Score=41.90 Aligned_cols=94 Identities=15% Similarity=0.264 Sum_probs=64.2
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCC-eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEe
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~ 181 (290)
++++||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++... . ..+..+-.++. .....+|+|+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGA-D--YVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTC-S--EEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCC-C--EEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 788999999974 77888888876 55 89999999998888876532 1 12211111110 11235999986
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.... ...++.+.+.|+++|.++....
T Consensus 243 ~~g~------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSGA------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC------HHHHHHHHHHHhcCCEEEEEcc
Confidence 5332 3467888999999999988654
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.13 E-value=0.37 Score=42.33 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcC-C-CCC-----CCCCCCccEEE
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGD-A-EDL-----PFPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d-~-~~l-----~~~~~~~D~i~ 180 (290)
+++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++... . ..+..+ . .++ ....+.+|+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-T--ECINPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-c--eEeccccccccHHHHHHHHhCCCCCEEE
Confidence 4789999999885 7888888887633389999999998888876532 1 122111 0 111 01123599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCC-CEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLG-GKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 213 (290)
-.... ...++.+.+.|+++ |.+++...
T Consensus 266 d~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 266 ECIGN------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCCc------HHHHHHHHHhhccCCcEEEEEec
Confidence 54321 34678899999999 99988653
No 356
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.02 E-value=0.3 Score=42.71 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=60.9
Q ss_pred CEEEEEcCcc-chhH-HHHH-hhCCCCe-EEEEeCCHH---HHHHHhhhCCCCCceEEEcCCCCCCCC-----CCCccEE
Q 022929 112 MLVVDVGGGT-GFTT-LGIV-KHVDAKN-VTILDQSPH---QLAKAKQKEPLKECKIVEGDAEDLPFP-----TDYADRY 179 (290)
Q Consensus 112 ~~vLDiG~G~-G~~~-~~l~-~~~~~~~-v~~vD~s~~---~~~~a~~~~~~~~v~~~~~d~~~l~~~-----~~~~D~i 179 (290)
++||-+|+|. |..+ ..++ +.. +.+ |+++|.+++ -++.+++.. .+.+ |..+..+. .+.+|+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lG----a~~v--~~~~~~~~~i~~~~gg~Dvv 246 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELD----ATYV--DSRQTPVEDVPDVYEQMDFI 246 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTT----CEEE--ETTTSCGGGHHHHSCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcC----Cccc--CCCccCHHHHHHhCCCCCEE
Confidence 8999999874 7777 8888 765 555 999999887 788887542 2333 33221110 1258998
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+-... . ...++.+.++|+++|.++....
T Consensus 247 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 247 YEATG-----F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 85432 1 2467888999999999988754
No 357
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.94 E-value=0.4 Score=41.67 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=63.0
Q ss_pred CCCEEEEE-cCc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-----CCCCCCccEEEec
Q 022929 110 RNMLVVDV-GGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-----PFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDi-G~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-----~~~~~~~D~i~~~ 182 (290)
++.+||-+ |+| .|..+..+++.. +.+|+++|.+++-++.+++... . ..+..+ .++ ....+.+|+|+-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~-~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGA-D--IVLNHK-ESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTC-S--EEECTT-SCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-c--EEEECC-ccHHHHHHHhCCCCccEEEEC
Confidence 68899999 565 488888888876 5799999999999998887532 1 111111 110 0123459999854
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.. ....++.+.++|+++|.++...
T Consensus 225 ~g------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 225 FN------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SC------HHHHHHHHHHHEEEEEEEEESS
T ss_pred CC------chHHHHHHHHHhccCCEEEEEC
Confidence 22 2356788899999999997653
No 358
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.87 E-value=0.82 Score=39.55 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=64.2
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+ |..+.. .....+|+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga-~--~~~--d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGA-D--ETV--NYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTSTTHHHHHHHHTTTTCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCC-C--EEE--cCCcccHHHHHHHHhCCCCceE
Confidence 47899999998 4688888888876 6799999999998888875421 1 122 322211 11236999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.... . ..++.+.+.|+++|.++....
T Consensus 239 vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 239 VVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred EEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 986544 1 246778889999999988654
No 359
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.81 E-value=0.3 Score=41.71 Aligned_cols=69 Identities=9% Similarity=0.035 Sum_probs=53.0
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCe---EEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC---C-CCCccEEEec
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKN---VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF---P-TDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~---~-~~~~D~i~~~ 182 (290)
...+++|+-||.|.+...+... +.+ +.++|+++.+.+..+.+.. +..++.+|+.++.. + ...+|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~~--~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRHQ--GKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHTT--TCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhCC--CCceeCCChHHccHHHhcccCCcCEEEec
Confidence 5679999999999999988876 444 5899999999988887764 44678889877641 1 1258999873
No 360
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.73 E-value=0.2 Score=43.53 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCc--cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEE
Q 022929 109 NRNMLVVDVGGG--TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G--~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~ 180 (290)
+++++||-+|+| .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. .....+|+++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga-~--~~~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGA-A--YVIDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCC-c--EEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence 488999999987 577888888776 6799999999988888886532 1 12221111110 1233699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-+..- ..+....+.|+++|.+++...
T Consensus 219 d~~g~-------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 219 DSIGG-------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp ESSCH-------HHHHHHHHTEEEEEEEEECCC
T ss_pred ECCCC-------hhHHHHHHHhcCCCEEEEEee
Confidence 64332 123344589999999988754
No 361
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.73 E-value=0.43 Score=41.06 Aligned_cols=94 Identities=13% Similarity=0.063 Sum_probs=64.7
Q ss_pred CCCCEEEEEc-Cc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEE
Q 022929 109 NRNMLVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~ 180 (290)
+++++||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. .....+|+++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGA-W--ETIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-C--EEEeCCCccHHHHHHHHhCCCCceEEE
Confidence 4789999998 44 588888888876 6799999999999998886532 1 12221111110 2234699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.+..- ..+....+.|+++|.+++...
T Consensus 215 d~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 215 DGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp ESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred ECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 65432 356788899999999988754
No 362
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.59 E-value=0.34 Score=42.13 Aligned_cols=96 Identities=17% Similarity=0.255 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCc--cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-----CCCC-CCccEEE
Q 022929 109 NRNMLVVDVGGG--TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-----PFPT-DYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~G--~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-----~~~~-~~~D~i~ 180 (290)
+++++||-+|+| .|..+..+++...+.+|+++|.+++.++.+++... . ..+...-.+. .... +.+|+++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA-D--YVINASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-C--EEecCCCccHHHHHHHHhcCCCceEEE
Confidence 378999999998 46666777776525789999999998888876421 1 1221111110 0111 3699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
....- ...++.+.+.|+++|.+++...
T Consensus 246 ~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 246 DLNNS------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp ESCCC------HHHHTTGGGGEEEEEEEEECCS
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEEECC
Confidence 65332 3467788899999999988654
No 363
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.48 E-value=0.81 Score=39.83 Aligned_cols=92 Identities=12% Similarity=0.184 Sum_probs=63.1
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+ |..+.. .....+|+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~--d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGA-H--EVF--NHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEE--ETTSTTHHHHHHHHHCTTCEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCC-C--EEE--eCCCchHHHHHHHHcCCCCcEE
Confidence 47899999997 4577777777775 6799999999998887765421 1 112 222211 11235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+..- ..+....++|+++|.+++...
T Consensus 243 vi~~~G~-------~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 243 IIEMLAN-------VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEESCHH-------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCh-------HHHHHHHHhccCCCEEEEEec
Confidence 9865331 356788899999999988753
No 364
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.23 E-value=2.2 Score=38.95 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=45.3
Q ss_pred CCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC-CCceEEEcCCCCC
Q 022929 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECKIVEGDAEDL 169 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~v~~~~~d~~~l 169 (290)
..+++|+-||.|.+...+... +...+.++|+++.+.+.-+.+... ++..++..|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 468999999999999998776 224478899999999988888632 3456778888543
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.17 E-value=0.38 Score=41.75 Aligned_cols=92 Identities=17% Similarity=0.179 Sum_probs=63.7
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEE
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~ 180 (290)
+++++||-+|+ | .|..+..+++.. +.+|++++.+++.++.+++... . ..+..+ .++. .....+|+++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~v~~~~-~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGA-D--IVLPLE-EGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTC-S--EEEESS-TTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-c--EEecCc-hhHHHHHHHHhCCCCceEEE
Confidence 47899999997 3 588888888886 6799999999988888886532 1 222222 2211 2233699998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
-+..- ..++.+.+.|+++|.+++..
T Consensus 233 d~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 233 DPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred ECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 65432 24678889999999998864
No 366
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.06 E-value=0.57 Score=40.98 Aligned_cols=94 Identities=17% Similarity=0.049 Sum_probs=64.4
Q ss_pred CCCCEEEEEc-Cc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CCCCCccEEEe
Q 022929 109 NRNMLVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~~~~~D~i~~ 181 (290)
+++++||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. .....+|+|+-
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGC-D--RPINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCC-c--EEEecCChhHHHHHHHhcCCCCCEEEE
Confidence 4789999999 34 588888888876 6799999999988888876321 1 12221111110 11235999986
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+..- ..++.+.+.|+++|.+++...
T Consensus 238 ~~g~-------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 238 SVGG-------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp CSCT-------HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCH-------HHHHHHHHHHhcCCEEEEEeC
Confidence 5331 467888999999999988653
No 367
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.02 E-value=0.46 Score=41.26 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=64.0
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC-CC-------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LP-------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~-l~-------~~~~~~D~ 178 (290)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... ... .|..+ .. ...+.+|+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~----~~~-~d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGG----EVF-IDFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTC----CEE-EETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCC----ceE-EecCccHhHHHHHHHHhCCCCCE
Confidence 47899999998 4577777777765 6799999998888777775321 111 13321 11 01125999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
++.+... ...++.+.+.|+++|.++.....
T Consensus 242 vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 242 VINVSVS------EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp EEECSSC------HHHHHHHTTSEEEEEEEEECCCC
T ss_pred EEECCCc------HHHHHHHHHHHhcCCEEEEEeCC
Confidence 9865432 34778899999999999887543
No 368
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.75 E-value=0.065 Score=47.08 Aligned_cols=96 Identities=20% Similarity=0.158 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCC-CC--CCCCCCccEEEecCc
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAE-DL--PFPTDYADRYVSAGS 184 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~-~l--~~~~~~~D~i~~~~~ 184 (290)
+++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++... . .++..+-. ++ ... +.+|+|+-...
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGA-D--HYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTC-S--EEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCC-C--EEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 3789999999875 77888888876 5689999999888888876432 1 12221111 10 011 35999986543
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
... ...++.+.++|+++|.++....
T Consensus 253 ~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 253 SLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 200 1134567789999999987654
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.66 E-value=1.1 Score=38.96 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=62.3
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+ |..+.. .....+|+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~-~--~~~--~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGA-A--AGF--NYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTC-S--EEE--ETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCC-c--EEE--ecCChHHHHHHHHHhcCCCceE
Confidence 47899999984 4577777777775 6799999999998888865422 1 112 222111 12235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+..- ..++...++|+++|.+++...
T Consensus 235 vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 235 ILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 9865432 146777899999999988754
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.64 E-value=0.71 Score=39.62 Aligned_cols=92 Identities=8% Similarity=0.035 Sum_probs=62.4
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+ |..+.. .....+|+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~-~--~~~--~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGA-W--QVI--NYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCC-C--EEE--ECCCccHHHHHHHHhCCCCceE
Confidence 47899999993 3577777777765 5799999999988888876421 1 112 222111 11235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+.. ...++.+.+.|+++|.+++...
T Consensus 213 vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 213 VYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 986543 1357888899999999988653
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.58 E-value=0.099 Score=44.66 Aligned_cols=94 Identities=23% Similarity=0.320 Sum_probs=54.5
Q ss_pred CceEEEcCCCC-CC-CCCCCccEEEecCccccc--------------------CCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 158 ECKIVEGDAED-LP-FPTDYADRYVSAGSIEYW--------------------PDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 158 ~v~~~~~d~~~-l~-~~~~~~D~i~~~~~l~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
++.++++|..+ +. +++++||+|++.--.... .....+++++.++|+|||.+++.....
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 46788999865 22 456789999985332211 012357789999999999998864321
Q ss_pred CchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 216 PTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.... ... ..+..+.-...+..+++++||.......+
T Consensus 101 ~~~~--~~~-g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW 136 (297)
T 2zig_A 101 AVAR--RRF-GRHLVFPLHADIQVRCRKLGFDNLNPIIW 136 (297)
T ss_dssp EEEC--C-----EEEECHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccc--ccC-CcccccccHHHHHHHHHHcCCeeeccEEE
Confidence 1000 000 00000111246778899999987665433
No 372
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.46 E-value=0.088 Score=46.17 Aligned_cols=94 Identities=21% Similarity=0.297 Sum_probs=61.8
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC-CCC-CCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA-EDL-PFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~-~~l-~~~~~~~D~i~~~~~l~ 186 (290)
++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++...... ++..+- ..+ ... +.+|+|+-...-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~--vi~~~~~~~~~~~~-~g~D~vid~~g~~ 255 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADD--YVIGSDQAKMSELA-DSLDYVIDTVPVH 255 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSC--EEETTCHHHHHHST-TTEEEEEECCCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCce--eeccccHHHHHHhc-CCCCEEEECCCCh
Confidence 789999999874 77788888876 5799999999888888774433222 221110 000 011 2599998643321
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
..++...++|+++|.++....
T Consensus 256 ------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 256 ------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ------CCSHHHHTTEEEEEEEEECSC
T ss_pred ------HHHHHHHHHhccCCEEEEeCC
Confidence 134567789999999988754
No 373
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.41 E-value=0.96 Score=39.32 Aligned_cols=92 Identities=9% Similarity=-0.015 Sum_probs=62.7
Q ss_pred CCC--CEEEEEcC--ccchhHHHHHhhCCCC-eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-------CCCCCc
Q 022929 109 NRN--MLVVDVGG--GTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-------FPTDYA 176 (290)
Q Consensus 109 ~~~--~~vLDiG~--G~G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-------~~~~~~ 176 (290)
+++ ++||-.|+ |.|..+..+++.. +. +|+++|.+++.++.+++..... ..+ |..+.. ...+.+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~--~~~--d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFD--AAI--NYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCS--EEE--ETTTSCHHHHHHHHCTTCE
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc--eEE--ecCchHHHHHHHHhcCCCC
Confidence 378 99999998 3477777777775 56 9999999998888887633221 112 222211 111259
Q ss_pred cEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
|+++.+.. ...++.+.++|+++|.+++..
T Consensus 232 d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 232 DVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred CEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 99986543 156788899999999998764
No 374
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.24 E-value=0.21 Score=42.99 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=62.4
Q ss_pred EEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEE-cCCCCC-CCCCCCccEEEecCccccc
Q 022929 113 LVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDL-PFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 113 ~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~-~d~~~l-~~~~~~~D~i~~~~~l~~~ 188 (290)
+||-+|+ | .|..+..+++.. +.+|+++|.+++-.+.+++... . ..+. .+.... ....+.+|+++-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~d~v~d~~g---- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGA-N--RILSRDEFAESRPLEKQLWAGAIDTVG---- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTC-S--EEEEGGGSSCCCSSCCCCEEEEEESSC----
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-C--EEEecCCHHHHHhhcCCCccEEEECCC----
Confidence 3999997 4 588999999987 5699999999998888887532 1 1111 111111 123346998875321
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
...++...+.|+++|.++.....
T Consensus 221 ---~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 ---DKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ---HHHHHHHHHTEEEEEEEEECCCT
T ss_pred ---cHHHHHHHHHHhcCCEEEEEecC
Confidence 13788999999999999887543
No 375
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.14 E-value=0.67 Score=40.57 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=61.1
Q ss_pred CCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCH---HHHHHHhhhCCCCCceEEEcCCCCCCCC------CCCccEEE
Q 022929 111 NMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSP---HQLAKAKQKEPLKECKIVEGDAEDLPFP------TDYADRYV 180 (290)
Q Consensus 111 ~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~v~~~~~d~~~l~~~------~~~~D~i~ 180 (290)
+++||-+|+|. |..+..+++.. +.+|+++|.++ +.++.+++.. .+.+ | .+ .+. .+.+|+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~g----a~~v--~-~~-~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETK----TNYY--N-SS-NGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHT----CEEE--E-CT-TCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhC----Ccee--c-hH-HHHHHHHHhCCCCCEEE
Confidence 89999999864 66777777765 56999999987 7777777542 2333 3 22 211 13599998
Q ss_pred ecCcccccCCHHHHH-HHHHhccCCCCEEEEEccC
Q 022929 181 SAGSIEYWPDPQRGI-REAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l-~~~~~~L~pgG~l~i~~~~ 214 (290)
...... ..+ +.+.+.|+++|.+++....
T Consensus 252 d~~g~~------~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 252 DATGAD------VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp ECCCCC------THHHHHHGGGEEEEEEEEECSCC
T ss_pred ECCCCh------HHHHHHHHHHHhcCCEEEEEecC
Confidence 654321 245 7889999999999887543
No 376
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.99 E-value=1.3 Score=38.05 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=62.9
Q ss_pred CCCCEEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+ |..+.. .....+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~-~--~~~--d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGC-H--HTI--NYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-C--EEE--ECCCHHHHHHHHHHhCCCCCeE
Confidence 47899999995 4577777777775 6799999999988888876421 1 112 222211 11235999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.+..- ..++.+.+.|+++|.++....
T Consensus 218 vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 218 VYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 9865432 356788899999999988653
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.91 E-value=0.25 Score=42.94 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=62.8
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCC-eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC-------CCCCccEEE
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF-------PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~-------~~~~~D~i~ 180 (290)
++++||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. . . ..+ |..+..+ ....+|+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a-~--~v~--~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-A-D--RLV--NPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-C-S--EEE--CTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-H-H--hcc--CcCccCHHHHHHHhcCCCCCEEE
Confidence 688999999874 77888888876 55 899999999888877653 2 1 112 2211110 023599998
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-...- ...++...+.|+++|.++....
T Consensus 237 d~~g~------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 237 EFSGN------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp ECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 54321 2467888999999999988654
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.70 E-value=1.1 Score=40.54 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----------------
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---------------- 170 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---------------- 170 (290)
+++.+||=+|+ | .|..+..+++.. +.++++++.+++-++.+++... . ..+...-.+..
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGA-E--AIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-C--EEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC-c--EEEecCcCcccccccccccchHHHHHH
Confidence 48899999997 5 488888888886 6799999999999998876532 1 12211111110
Q ss_pred -------CCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 171 -------FPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 171 -------~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.....+|+|+-.-. ...++...++|+++|.+++...
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEec
Confidence 11246999885422 1467888899999999988653
No 379
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.32 E-value=0.2 Score=43.21 Aligned_cols=93 Identities=15% Similarity=0.216 Sum_probs=60.5
Q ss_pred CCC-EEEEEcC--ccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEc-CC-CC-C-CCCCCCccEEEec
Q 022929 110 RNM-LVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG-DA-ED-L-PFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~-~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~-d~-~~-l-~~~~~~~D~i~~~ 182 (290)
++. +||-+|+ |.|..+..+++.. +.++++++.+++-++.+++... .. .+.. +. .+ . ....+.+|+++-.
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa-~~--~i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGA-KE--VLAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTC-SE--EEECC---------CCSCCEEEEEEC
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCC-cE--EEecCCcHHHHHHHhcCCcccEEEEC
Confidence 554 7999997 4588888888886 5789999999888888876421 11 1111 11 00 0 1223469998854
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
..- ..++...+.|+++|.+++...
T Consensus 224 ~g~-------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VGG-------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp STT-------TTHHHHHHTEEEEEEEEECSC
T ss_pred CcH-------HHHHHHHHhhccCCEEEEEee
Confidence 321 146778899999999988653
No 380
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.19 E-value=0.07 Score=45.55 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=61.0
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC-CCC--CCCCCCccEEEecC
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA-EDL--PFPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~-~~l--~~~~~~~D~i~~~~ 183 (290)
+++++||-+|+ | .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+- .++ .. +.+|+++. .
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~~~~~~~~~~~~~--~~~d~vid-~ 196 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGA-E--EAATYAEVPERAKAW--GGLDLVLE-V 196 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTC-S--EEEEGGGHHHHHHHT--TSEEEEEE-C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCC-C--EEEECCcchhHHHHh--cCceEEEE-C
Confidence 47899999998 3 588888888876 5799999999888887765321 1 1222110 000 01 35999986 3
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.- ..++...+.|+++|.++...
T Consensus 197 g~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 197 RG-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp SC-------TTHHHHHTTEEEEEEEEEC-
T ss_pred CH-------HHHHHHHHhhccCCEEEEEe
Confidence 21 25678889999999988764
No 381
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.10 E-value=1.2 Score=38.73 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=63.7
Q ss_pred CCCCEEEEEc-Cc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CCCCCccEEEe
Q 022929 109 NRNMLVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~~~~~D~i~~ 181 (290)
+++++||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.++. ...+.+|+++.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGA-K--RGINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-C--EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence 4789999995 34 588888888876 6799999999999998886532 1 12221111110 01245999986
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+..- ..++...+.|+++|.+++...
T Consensus 242 ~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 242 MIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 5432 256778899999999988754
No 382
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.09 E-value=12 Score=37.42 Aligned_cols=53 Identities=13% Similarity=0.163 Sum_probs=41.9
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCC--eEEEEeCCHHHHHHHhhhCCCCCceEEEcCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECKIVEGDA 166 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~ 166 (290)
...+++|+-||.|.++.-+... +. .+.++|+++.+.+.-+.|.. +..++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~p--~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNNP--GSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHCT--TSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC--CCccccccH
Confidence 3468999999999999999887 54 57899999999998888864 344555543
No 383
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.07 E-value=0.16 Score=44.83 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=60.0
Q ss_pred CCCCEEEEEc-Cc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC---CCCCCccEEEecC
Q 022929 109 NRNMLVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---FPTDYADRYVSAG 183 (290)
Q Consensus 109 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---~~~~~~D~i~~~~ 183 (290)
+++++||-+| +| .|..+..+++.. +.+|++++ +++..+.+++... . ..+..+-.++. .....+|+|+-..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa-~--~v~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGA-D--DVIDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTC-S--EEEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCC-C--EEEECCchHHHHHHhhcCCCCEEEECC
Confidence 4789999999 45 488888888886 57999998 6777777764321 1 12221111100 0113599988543
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
. .....+....+.|+++|.++....
T Consensus 257 g-----~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 257 G-----GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp C-----TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred C-----ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 2 222345677889999999987653
No 384
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.78 E-value=0.87 Score=41.01 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=63.8
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEE---cCCCCC--------------
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE---GDAEDL-------------- 169 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~---~d~~~l-------------- 169 (290)
+++++||-+|+ | -|..+..+++.. +.++++++.+++-++.+++... .. .+. .|..+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa-~~--~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGC-DL--VINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-CC--EEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-CE--EEecccccccccccccccccchhhhH
Confidence 48899999997 4 478888888876 6799999999999998876432 11 111 111000
Q ss_pred ------CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 170 ------PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 170 ------~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
......+|+++-.... ..++...+.|+++|.+++...
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESCC
T ss_pred HHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEec
Confidence 0012359999864332 357788899999999988754
No 385
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.68 E-value=0.23 Score=44.01 Aligned_cols=101 Identities=21% Similarity=0.154 Sum_probs=59.1
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
++++|+=+|+|. |..+...+... +.+|+++|.+++.++.+++..... +.....+..++.-.-..+|+|+..-.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 678999999975 66555666665 569999999999888777643321 111111111110000248999874322111
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
..+.-+.++..+.++|||.++-..
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEe
Confidence 111223456778899999987654
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.57 E-value=0.17 Score=44.48 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=61.1
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC-CCC-CCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA-EDL-PFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~-~~l-~~~~~~~D~i~~~~~l~ 186 (290)
++++||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++..... ..+..+- ..+ ... +.+|+|+-.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~--~v~~~~~~~~~~~~~-~~~D~vid~~g~~ 262 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGAD--SFLVSRDQEQMQAAA-GTLDGIIDTVSAV 262 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCS--EEEETTCHHHHHHTT-TCEEEEEECCSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCc--eEEeccCHHHHHHhh-CCCCEEEECCCcH
Confidence 789999999875 77778888876 579999999998888777443322 1221110 000 011 2599998654321
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
..++...+.|+++|.++....
T Consensus 263 ------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 263 ------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ------CCSHHHHHHEEEEEEEEECCC
T ss_pred ------HHHHHHHHHHhcCCEEEEEcc
Confidence 124567788999999887654
No 387
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.55 E-value=4.5 Score=29.18 Aligned_cols=91 Identities=16% Similarity=0.278 Sum_probs=51.7
Q ss_pred CCEEEEEcCcc-chhH-HHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCc
Q 022929 111 NMLVVDVGGGT-GFTT-LGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGS 184 (290)
Q Consensus 111 ~~~vLDiG~G~-G~~~-~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~ 184 (290)
+.+|+=+|+|. |... ..+.+. +.+|+++|.+++.++..++.. ++.++.+|..+.. ..-..+|+|+...-
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 46899999864 3322 233333 678999999998877665432 3456677764321 11235898887532
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
-. .....+..+.+.+.++ .+++
T Consensus 79 ~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 79 KE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred Cc---hHHHHHHHHHHHcCCC-EEEE
Confidence 11 1123344555557765 4444
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.41 E-value=1.2 Score=38.14 Aligned_cols=93 Identities=16% Similarity=0.098 Sum_probs=60.4
Q ss_pred CCCCEEEEEc-Cc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC-CCCCCCCccEEEecCcc
Q 022929 109 NRNMLVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LPFPTDYADRYVSAGSI 185 (290)
Q Consensus 109 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~-l~~~~~~~D~i~~~~~l 185 (290)
+++++||=+| +| .|..+..+++.. +.++++++ +++..+.+++... . ..+..+-.+ +.-.-..+|+|+-.-.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa-~--~~i~~~~~~~~~~~~~g~D~v~d~~g- 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGA-E--QCINYHEEDFLLAISTPVDAVIDLVG- 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTC-S--EEEETTTSCHHHHCCSCEEEEEESSC-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCC-C--EEEeCCCcchhhhhccCCCEEEECCC-
Confidence 4889999996 66 488999999887 67899987 5555777776532 1 122221111 1101135999885432
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
. ..+....++|+++|.++....
T Consensus 225 -----~-~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 225 -----G-DVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -----H-HHHHHHGGGEEEEEEEEECCS
T ss_pred -----c-HHHHHHHHhccCCCEEEEeCC
Confidence 1 234788999999999988643
No 389
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.34 E-value=0.74 Score=39.72 Aligned_cols=89 Identities=12% Similarity=-0.038 Sum_probs=53.6
Q ss_pred CceEEEcCCCC-CC-CCCCCccEEEecCcccc--------------cCCHHHHHHHHHhccCCCCEEEEEccCC--Cchh
Q 022929 158 ECKIVEGDAED-LP-FPTDYADRYVSAGSIEY--------------WPDPQRGIREAYRVLKLGGKACIIGPVY--PTFW 219 (290)
Q Consensus 158 ~v~~~~~d~~~-l~-~~~~~~D~i~~~~~l~~--------------~~~~~~~l~~~~~~L~pgG~l~i~~~~~--~~~~ 219 (290)
+..++++|..+ +. +++++||+|++.--... .......++++.++|+|||.+++..... ....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCc
Confidence 46778888743 32 45678999998522211 1123478889999999999998864332 1000
Q ss_pred HhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 220 LSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
.........+.+++++.||.......+
T Consensus 94 --------~~~~~~~~~i~~~~~~~Gf~~~~~iiW 120 (323)
T 1boo_A 94 --------ARSIYNFRVLIRMIDEVGFFLAEDFYW 120 (323)
T ss_dssp --------EECCHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred --------ccccchHHHHHHHHHhCCCEEEEEEEE
Confidence 000012344556788999987664433
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.10 E-value=0.23 Score=43.78 Aligned_cols=101 Identities=21% Similarity=0.189 Sum_probs=56.4
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
++++|+=+|+|. |..+...+... +.+|+++|.+++.++.+++.... .+.....+..++.-.-..+|+|+..-.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGG-RVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-SEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCc-eEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 568999999964 55555555554 57999999999888777654322 1111111111110000248999865433211
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
..+.-+.+...+.+++||.++...
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC
T ss_pred ccchhHHHHHHHhhcCCCEEEEEe
Confidence 111113466778889999887653
No 391
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.06 E-value=1.3 Score=32.71 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=44.3
Q ss_pred CCEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEec
Q 022929 111 NMLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSA 182 (290)
Q Consensus 111 ~~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~ 182 (290)
..+|+=+|||. |. ++..+.+. +.+|+++|.+++.++.+++. +..++.+|..+.. ..-..+|+|+..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE----GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT----TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC----CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 45799999975 33 22333333 68999999999988877653 4677888886532 122358988864
No 392
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.36 E-value=0.25 Score=42.59 Aligned_cols=93 Identities=15% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCC-EEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEc-C--CCCC-CCCCCCccEEEec
Q 022929 110 RNM-LVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEG-D--AEDL-PFPTDYADRYVSA 182 (290)
Q Consensus 110 ~~~-~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~-d--~~~l-~~~~~~~D~i~~~ 182 (290)
++. +||-+|+ | .|..+..+++.. +.++++++.+++.++.+++... .. .+.. + ...+ ....+.+|+++-.
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa-~~--v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGA-SE--VISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTC-SE--EEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-cE--EEECCCchHHHHHHhhcCCccEEEEC
Confidence 554 8999997 4 588888888876 5789999998887777776432 11 1111 1 1111 1223459998854
Q ss_pred CcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 183 GSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 183 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.. . ..+....+.|+++|.+++...
T Consensus 225 ~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 225 VG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred Cc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 32 2 367888999999999988654
No 393
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.96 E-value=0.91 Score=39.34 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=62.9
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEE
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYV 180 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~ 180 (290)
+++++||-+|+ | .|..+..+++.. +.+|+++ .+++.++.+++... ..+. +-.++. .....+|+|+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa----~~i~-~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGA----TPID-ASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTS----EEEE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCC----CEec-cCCCHHHHHHHHhcCCCceEEE
Confidence 47899999993 4 488888888876 6799999 88888888876532 2222 211110 1223599988
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-.-. . ..+....+.|+++|.++....
T Consensus 222 d~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 222 DTLG-----G--PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp ESSC-----T--HHHHHHHHHEEEEEEEEESCC
T ss_pred ECCC-----c--HHHHHHHHHHhcCCeEEEEcc
Confidence 6432 1 467888899999999987643
No 394
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.57 E-value=2.3 Score=37.20 Aligned_cols=121 Identities=10% Similarity=0.014 Sum_probs=71.4
Q ss_pred CCCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
...+|.=||+|. | .++..+++. +.+|++.|.+++.++.+.+. ++.. ..+..++--.....|+|+..---.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~----g~~~-~~s~~e~~~~a~~~DvVi~~vp~~- 92 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE----GIAG-ARSIEEFCAKLVKPRVVWLMVPAA- 92 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT----TCBC-CSSHHHHHHHSCSSCEEEECSCGG-
T ss_pred cCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC----CCEE-eCCHHHHHhcCCCCCEEEEeCCHH-
Confidence 357899999985 4 345555555 68999999999988777643 2111 111111100012359888643222
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
..+.+++.+...|++|..++-.....+. +...+.+.+.+.|...++.-..+
T Consensus 93 --~v~~vl~~l~~~l~~g~iiId~st~~~~---------------~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 93 --VVDSMLQRMTPLLAANDIVIDGGNSHYQ---------------DDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp --GHHHHHHHHGGGCCTTCEEEECSSCCHH---------------HHHHHHHHHHTTTCEEEEEEEEC
T ss_pred --HHHHHHHHHHhhCCCCCEEEeCCCCChH---------------HHHHHHHHHHHCCCEEEeCCCCC
Confidence 4567888888899888766544332211 23455566777788777664444
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.24 E-value=1.1 Score=39.92 Aligned_cols=97 Identities=16% Similarity=0.243 Sum_probs=59.8
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCC-------------CCCCC---
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAE-------------DLPFP--- 172 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~-------------~l~~~--- 172 (290)
++.+|+=+|+|. |..+..++... +.+|+++|.++..++.+++.. ..+...+.. .++-.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~G----~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASLG----AKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHTT----CEECCCCC-----------------CHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcC----Cceeecccccccccccccchhhhcchhhhh
Confidence 578999999996 77777777776 679999999998888877531 122221110 00000
Q ss_pred ---------CCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEE
Q 022929 173 ---------TDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 173 ---------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
-...|+|+..-....-+.+.-+-+++.+.+|||..++=.
T Consensus 264 ~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 024899986432221122222446888889999887654
No 396
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=86.86 E-value=2 Score=35.30 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=63.9
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC----------CCCCc
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF----------PTDYA 176 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~----------~~~~~ 176 (290)
.++++|=.|++.|. ++..+++. +.+|+.+|.+++.++...+.. ..++.++..|+.+... .-++.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 56889988877653 44445555 789999999988777665443 2367888999876320 01358
Q ss_pred cEEEecCcccccC-----CHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 177 DRYVSAGSIEYWP-----DPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 177 D~i~~~~~l~~~~-----~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
|+++.+-...... +.+ .+.+.+...++++|.++...
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 9888764433221 111 24556666777788877764
No 397
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.62 E-value=0.33 Score=42.68 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=58.6
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
++++|+=+|+|. |..+...+... +.+|+++|.+++.++.+++.... .+.....+..++.-.-..+|+|+..-.....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS-RVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG-GSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc-eeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 458999999974 66666666665 45999999999888777654321 1222211111110000248999865433221
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
..+.-+.+...+.++|||.++-..
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEe
Confidence 111112345667889999887754
No 398
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.37 E-value=25 Score=34.00 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=36.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-----CCeEEEEeCCHHHHHHHhhhCC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-----AKNVTILDQSPHQLAKAKQKEP 155 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-----~~~v~~vD~s~~~~~~a~~~~~ 155 (290)
+..+|||+-||.|.++.-+.+... -..+.++|+++.+++--+.|..
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 346899999999999888866510 1357889999999998888764
No 399
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.17 E-value=0.84 Score=34.83 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCC-CCCC----CCCccEEEecCcc
Q 022929 111 NMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAED-LPFP----TDYADRYVSAGSI 185 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~-l~~~----~~~~D~i~~~~~l 185 (290)
..-|||+|-|+|..--++.+.+|+.+++.+|-.-..- .... .+.-.++.+|+.+ ++.. ..+.-++.+....
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~h---p~~~-P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~ 116 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASH---PDST-PPEAQLILGDIRETLPATLERFGATASLVHADLGG 116 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCC---GGGC-CCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCCC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccC---CCCC-CchHheecccHHHHHHHHHHhcCCceEEEEeecCC
Confidence 4569999999999999999999999999999721100 0000 1223466776633 2210 2223333332222
Q ss_pred cccCCHH----HHHHHHHhccCCCCEEEEEcc
Q 022929 186 EYWPDPQ----RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 186 ~~~~~~~----~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++-.+.. .+-.-+..+|.|||.++-..+
T Consensus 117 g~~~~d~a~a~~lsplI~~~la~GGi~vS~~p 148 (174)
T 3iht_A 117 HNREKNDRFARLISPLIEPHLAQGGLMVSSDR 148 (174)
T ss_dssp SCHHHHHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcchhHHHHHhhhHHHHHHhcCCcEEEeCCc
Confidence 2221111 233355678889998865443
No 400
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.84 E-value=3.1 Score=32.07 Aligned_cols=94 Identities=17% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----C-CCCCccEEEecC
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----F-PTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~-~~~~~D~i~~~~ 183 (290)
.+.+|+=+|+|. |......+....+.+|+++|.+++.++.+++. ++..+.+|..+.. . .-..+|+|+...
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----GRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----TCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----CCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 356899999874 44333333321146899999999988877643 4566777765421 1 123589888642
Q ss_pred cccccCCHH--HHHHHHHhccCCCCEEEEEc
Q 022929 184 SIEYWPDPQ--RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 184 ~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.. ..+-...+.+.|++.++...
T Consensus 114 -----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 -----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp -----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred -----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 2222 22223445566777776643
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.54 E-value=11 Score=31.03 Aligned_cols=92 Identities=10% Similarity=0.035 Sum_probs=57.2
Q ss_pred CEEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
++||=.|+ |.++..+++.+ .+.+|++++-++........ .+++++.+|+.++. -..+|+|+.........
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS--LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC--CTTCCEEEECCCCBTTB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----CCCeEEEecccccc--cCCCCEEEECCCccccc
Confidence 68999995 77776665543 26799999998765544432 46889999998866 34599998765544333
Q ss_pred CH--HHHHHHHHhccCCCCEEEEE
Q 022929 190 DP--QRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 190 ~~--~~~l~~~~~~L~pgG~l~i~ 211 (290)
++ ..+++.+.+.-..-..+++.
T Consensus 78 ~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 78 DPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp CHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred cHHHHHHHHHHHhhcCCceEEEEe
Confidence 32 23444443321222455543
No 402
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.51 E-value=3.3 Score=34.72 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=66.5
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----------CCCCCc
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----------FPTDYA 176 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----------~~~~~~ 176 (290)
+++.+|--|++.|. .+..|++. +.+|+.+|.+++.++.+.+... .++..+..|+.+.. -.-++.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIG-GGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 67889988988874 55566666 8999999999998877655443 35677888986632 001468
Q ss_pred cEEEecCcccccCC-----HH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 177 DRYVSAGSIEYWPD-----PQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 177 D~i~~~~~l~~~~~-----~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
|+++.+-....... .+ ...+.+...++.+|.++...
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 98887644332211 11 34556667788888877653
No 403
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.43 E-value=3.7 Score=35.86 Aligned_cols=93 Identities=15% Similarity=0.238 Sum_probs=61.4
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CCCCCccEEEe
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~~~~~D~i~~ 181 (290)
.++.+||=+|+ | .|..+..+++.. +.+|+++. +++-++.+++... . ..+...-.++. ..++.+|+++-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa-~--~vi~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGA-E--EVFDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTC-S--EEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCC-c--EEEECCCchHHHHHHHHccCCccEEEE
Confidence 47899999998 3 688999999886 66888885 7888888876432 1 22222111110 12234999985
Q ss_pred cCcccccCCHHHHHHHHHhcc-CCCCEEEEEc
Q 022929 182 AGSIEYWPDPQRGIREAYRVL-KLGGKACIIG 212 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L-~pgG~l~i~~ 212 (290)
.-.- ...++.+.+.| +++|+++...
T Consensus 238 ~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 238 CITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred CCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 3321 24567788888 6999998865
No 404
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=84.73 E-value=0.42 Score=42.98 Aligned_cols=42 Identities=24% Similarity=0.391 Sum_probs=31.3
Q ss_pred CCEEEEEcCccchhHHHHHhhCC-----CCeEEEEeCCHHHHHHHhh
Q 022929 111 NMLVVDVGGGTGFTTLGIVKHVD-----AKNVTILDQSPHQLAKAKQ 152 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~~~-----~~~v~~vD~s~~~~~~a~~ 152 (290)
..+|+|+|+|+|.++..+++... ..+|+.||+|+...+.-++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~ 184 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRE 184 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHH
Confidence 47999999999998877764321 2489999999876554443
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.62 E-value=3.3 Score=36.97 Aligned_cols=92 Identities=21% Similarity=0.212 Sum_probs=60.5
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~ 184 (290)
...+|+=+|+|. |......+... +..|+++|.+++.++.+++. ++.++.+|..+.. ..-..+|+|++..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~----g~~vi~GDat~~~~L~~agi~~A~~viv~~- 76 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKF----GMKVFYGDATRMDLLESAGAAKAEVLINAI- 76 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHT----TCCCEESCTTCHHHHHHTTTTTCSEEEECC-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhC----CCeEEEcCCCCHHHHHhcCCCccCEEEECC-
Confidence 346799999975 54444444332 68999999999999988753 4567889987632 2224589888643
Q ss_pred ccccCCHH--HHHHHHHhccCCCCEEEEE
Q 022929 185 IEYWPDPQ--RGIREAYRVLKLGGKACII 211 (290)
Q Consensus 185 l~~~~~~~--~~l~~~~~~L~pgG~l~i~ 211 (290)
++.. ..+-...+.+.|+..++.-
T Consensus 77 ----~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 77 ----DDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp ----SSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ----CChHHHHHHHHHHHHhCCCCeEEEE
Confidence 2333 3444556667788777764
No 406
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.27 E-value=0.4 Score=42.38 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=58.6
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCC--C-------------------
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDA--E------------------- 167 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~--~------------------- 167 (290)
++.+|+=||+|. |..+...+... +.+|+++|.+++.++.+++. +.++...+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l----Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV----GAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT----TCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 578999999995 66666666665 67999999999888877753 122222110 0
Q ss_pred CCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEE
Q 022929 168 DLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 168 ~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
.+.-.-..+|+|+..-....-+.+.-+-+++.+.+|||+.++=.
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 00000135899996532211112222346788889998877653
No 407
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.15 E-value=0.76 Score=40.66 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=33.3
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhh
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~ 152 (290)
++.+|+=+|+|. |..+..+++.. +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 688999999995 66677777776 5689999999877666654
No 408
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.13 E-value=8.4 Score=32.45 Aligned_cols=88 Identities=15% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 111 NMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 111 ~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
..+|.=||+|. | .++..+++. +.+|++.|.+++.++.+.+. +......+..+. . ...|+|+.. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~----g~~~~~~~~~e~-~--~~aDvvi~~-----v 72 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE----GACGAAASAREF-A--GVVDALVIL-----V 72 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----TCSEEESSSTTT-T--TTCSEEEEC-----C
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc----CCccccCCHHHH-H--hcCCEEEEE-----C
Confidence 46799999986 4 345555555 67999999999988877654 222223444332 1 237988864 3
Q ss_pred CCH---HHHH---HHHHhccCCCCEEEEEc
Q 022929 189 PDP---QRGI---REAYRVLKLGGKACIIG 212 (290)
Q Consensus 189 ~~~---~~~l---~~~~~~L~pgG~l~i~~ 212 (290)
+++ +.++ +.+...+++|..++-..
T Consensus 73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 333 2333 45567778877665443
No 409
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=82.89 E-value=3.4 Score=36.32 Aligned_cols=96 Identities=9% Similarity=0.051 Sum_probs=57.6
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCC-----CceEEEcCCCCCCCCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-----ECKIVEGDAEDLPFPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~v~~~~~d~~~l~~~~~~~D~i~~~~~ 184 (290)
.+.+||.|+.+.|.++..++.. .++.+.-|--.....+.|...+ ++.+.. ....+ ...+|+|+....
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~---~~~~~~v~~~lp 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDESSVKFLD-STADY---PQQPGVVLIKVP 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEE-TTSCC---CSSCSEEEEECC
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCccceEecc-ccccc---ccCCCEEEEEcC
Confidence 3467999999999999888765 2344432444333334432221 244433 22222 235999886322
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
.........+..+...|++|+.+++....
T Consensus 110 -k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 -KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp -SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred -CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 12222346888999999999999877543
No 410
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=82.61 E-value=3.6 Score=37.64 Aligned_cols=90 Identities=19% Similarity=0.116 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.++++|+=+|+|. |......++.. +.+|+++|.++...+.+++. +.+. .++.+. . ...|+|+....-.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----Ga~~--~~l~e~-l--~~aDvVi~atgt~~ 341 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----GFDV--VTVEEA-I--GDADIVVTATGNKD 341 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----TCEE--CCHHHH-G--GGCSEEEECSSSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCEE--ecHHHH-H--hCCCEEEECCCCHH
Confidence 3789999999985 66655666665 57999999999887777643 2222 222221 1 24899987532222
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+- -.+..+.+|+||.++....
T Consensus 342 ~i-----~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 342 II-----MLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp SB-----CHHHHHHSCTTCEEEECSS
T ss_pred HH-----HHHHHHhcCCCcEEEEeCC
Confidence 11 1256677899999977654
No 411
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.44 E-value=10 Score=32.27 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=57.9
Q ss_pred CCEEEEEcCcc-c-hhHHHHHhhCCCC--eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 111 NMLVVDVGGGT-G-FTTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 111 ~~~vLDiG~G~-G-~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
..+|.=||+|. | .++..+++. +. +|+++|.+++.++.+.+... +.-...|..++ .-...|+|+..--..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~---~~~~~~~~~~~--~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI---IDEGTTSIAKV--EDFSPDFVMLSSPVR 105 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS---CSEEESCTTGG--GGGCCSEEEECSCGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCC---cchhcCCHHHH--hhccCCEEEEeCCHH
Confidence 36899999986 3 455556555 45 89999999998888775421 11123333320 112489988653322
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEE
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
....+++++...++++..++-.
T Consensus 106 ---~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 106 ---TFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp ---GHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---HHHHHHHHHhhccCCCcEEEEC
Confidence 2356888898889988766543
No 412
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=82.16 E-value=17 Score=29.65 Aligned_cols=101 Identities=8% Similarity=0.088 Sum_probs=61.6
Q ss_pred CCCEEEEEcCc--cch---hHHHHHhhCCCCeEEEEeCCHHHHHHHh---hhCCCCCceEEEcCCCCCC-----CC----
Q 022929 110 RNMLVVDVGGG--TGF---TTLGIVKHVDAKNVTILDQSPHQLAKAK---QKEPLKECKIVEGDAEDLP-----FP---- 172 (290)
Q Consensus 110 ~~~~vLDiG~G--~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~---~~~~~~~v~~~~~d~~~l~-----~~---- 172 (290)
.++++|=.|++ +|. ++..+++. +.+|+.++.++...+.+. +.....++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 56889999876 332 44555555 789999988764333332 2233336889999997642 00
Q ss_pred -CCCccEEEecCcccc-------c--CCHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 173 -TDYADRYVSAGSIEY-------W--PDPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 173 -~~~~D~i~~~~~l~~-------~--~~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
.+.+|+++.+-.... + .+.+ .+++.+...++++|.++...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 135898887654332 0 1111 25566677788888887764
No 413
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.16 E-value=17 Score=28.83 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=46.7
Q ss_pred CCCEEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCCCCCc-eEEEcCCC-CCCCCCCCccEEEecCcc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKEC-KIVEGDAE-DLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~v-~~~~~d~~-~l~~~~~~~D~i~~~~~l 185 (290)
.+++||=.|+ +|.++..+++.+ .+.+|++++-+++..+.... .++ +++.+|+. .+.-.-+.+|+|+.....
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 5788998885 444444443321 26899999998776554442 267 88999986 221111358999976655
Q ss_pred cccCC
Q 022929 186 EYWPD 190 (290)
Q Consensus 186 ~~~~~ 190 (290)
....+
T Consensus 95 ~~~~~ 99 (236)
T 3e8x_A 95 GPHTG 99 (236)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 43333
No 414
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=81.95 E-value=5.5 Score=29.79 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGS 184 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~ 184 (290)
++.+|+=+|+|. |......+... +.+|+++|.+++.++.+++ ..+...+.+|..+.. ..-..+|+|+....
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 678999999975 54444333333 6799999998876544331 224556666654311 11235898886532
Q ss_pred ccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 185 IEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 185 l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
-. .....+..+.+.+.+...++...
T Consensus 94 ~~---~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 94 DD---STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp CH---HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred Cc---HHHHHHHHHHHHHCCCCeEEEEE
Confidence 11 11223334444445555555543
No 415
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=81.87 E-value=0.57 Score=41.82 Aligned_cols=42 Identities=19% Similarity=0.391 Sum_probs=33.7
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhh
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~ 152 (290)
++.+|+=+|+|. |..+..++..+ +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 578999999996 66677777776 5699999999887777654
No 416
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=81.40 E-value=2.4 Score=36.63 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=55.2
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCC-----CCCCCCccEEEe
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDL-----PFPTDYADRYVS 181 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l-----~~~~~~~D~i~~ 181 (290)
+++++||=.|+ | .|..+..+++..++.+|++++ +++..+.++ . ... ..+. +-.++ ....+.+|+|+-
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~-ga~--~~~~-~~~~~~~~~~~~~~~g~Dvv~d 214 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-D-SVT--HLFD-RNADYVQEVKRISAEGVDIVLD 214 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-G-GSS--EEEE-TTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-c-CCc--EEEc-CCccHHHHHHHhcCCCceEEEE
Confidence 48899999998 4 478888888876667899988 555555555 2 111 2222 11111 012346999985
Q ss_pred cCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 182 AGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 182 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
.-.- ..++...++|+++|.+++...
T Consensus 215 ~~g~-------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 215 CLCG-------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp ECC--------------CTTEEEEEEEEEEC-
T ss_pred CCCc-------hhHHHHHHHhhcCCEEEEECC
Confidence 4321 123678899999999988753
No 417
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=80.40 E-value=28 Score=35.92 Aligned_cols=52 Identities=13% Similarity=0.159 Sum_probs=40.8
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCCC--eEEEEeCCHHHHHHHhhhCCCCCceEEEcC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECKIVEGD 165 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d 165 (290)
...+++|+-||.|.++.-+... +. .+.++|+++.+.+.-+.|.. +..++..|
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p--~~~~~~~D 903 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP--GTTVFTED 903 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT--TSEEECSC
T ss_pred CCceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC--CCcEeecc
Confidence 4568999999999999998876 54 57899999999998888864 33444444
No 418
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=79.84 E-value=2.4 Score=36.60 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=57.1
Q ss_pred CEEEEE-cCc-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC------CCCCCccEEEecC
Q 022929 112 MLVVDV-GGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP------FPTDYADRYVSAG 183 (290)
Q Consensus 112 ~~vLDi-G~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~------~~~~~~D~i~~~~ 183 (290)
.+||=. |+| .|..+..+++.. +.+|+++|.+++-++.+++... . ..+..+-.++. .....+|+++-..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~v~~~~~~~g~D~vid~~ 241 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGA-A--HVLNEKAPDFEATLREVMKAEQPRIFLDAV 241 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTC-S--EEEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-C--EEEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence 566654 554 377777777776 5799999999988888876532 1 12222111110 0012599998643
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
.- ..++.+.+.|+++|.+++..
T Consensus 242 g~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 242 TG-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CH-------HHHHHHHHHSCTTCEEEECC
T ss_pred CC-------hhHHHHHhhhcCCCEEEEEe
Confidence 32 23477889999999998875
No 419
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=79.38 E-value=7.9 Score=32.62 Aligned_cols=80 Identities=20% Similarity=0.081 Sum_probs=49.7
Q ss_pred CceEE-EcCCCCCCCCCCCccEEEecCcccccCCH-H----------HHHHHHHhccCCCCEEEEEccCCCchhHhhhhH
Q 022929 158 ECKIV-EGDAEDLPFPTDYADRYVSAGSIEYWPDP-Q----------RGIREAYRVLKLGGKACIIGPVYPTFWLSRYFA 225 (290)
Q Consensus 158 ~v~~~-~~d~~~l~~~~~~~D~i~~~~~l~~~~~~-~----------~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~ 225 (290)
+..+. ..|+...+ ..+++|+|++...-..-... + -+++-+.++|+|||.+++.......-
T Consensus 189 GAt~~~~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr------- 260 (320)
T 2hwk_A 189 EATFRARLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADR------- 260 (320)
T ss_dssp TCSEECCGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSH-------
T ss_pred CceeecccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcc-------
Confidence 44555 66665533 33569999996544332222 1 25567789999999999986655421
Q ss_pred HHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 022929 226 DVWMLFPKEEEYIEWFQKAGFKDVQLKR 253 (290)
Q Consensus 226 ~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 253 (290)
..+++...|++ -|+.+++.+
T Consensus 261 -------~se~lv~~LaR-~F~~Vr~vK 280 (320)
T 2hwk_A 261 -------ASESIIGAIAR-QFKFSRVCK 280 (320)
T ss_dssp -------HHHHHHHHHHT-TEEEEEEEC
T ss_pred -------cHHHHHHHHHH-hcceeeeeC
Confidence 23667777765 487666654
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.75 E-value=12 Score=31.06 Aligned_cols=84 Identities=18% Similarity=0.184 Sum_probs=50.9
Q ss_pred CEEEEEcC-cc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 112 MLVVDVGG-GT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 112 ~~vLDiG~-G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.+|.=||+ |. |. ++..+++. +.+|+++|.+++..+.+.+. ++.. .+..+ . -...|+|+..---..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~----g~~~--~~~~~--~-~~~aDvVi~av~~~~- 79 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM----GIPL--TDGDG--W-IDEADVVVLALPDNI- 79 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT----TCCC--CCSSG--G-GGTCSEEEECSCHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc----CCCc--CCHHH--H-hcCCCEEEEcCCchH-
Confidence 47999999 85 43 44455544 57999999999887777652 2221 12211 1 124899886432221
Q ss_pred CCHHHHHHHHHhccCCCCEEE
Q 022929 189 PDPQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~ 209 (290)
...+++++...++++..++
T Consensus 80 --~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 80 --IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp --HHHHHHHHGGGSCTTCEEE
T ss_pred --HHHHHHHHHHhCCCCCEEE
Confidence 3467777777777766554
No 421
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.50 E-value=14 Score=30.35 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=51.5
Q ss_pred EEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccCC
Q 022929 113 LVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPD 190 (290)
Q Consensus 113 ~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~ 190 (290)
+|.=||||. |. ++..+.+. +.+|+++|.+++.++.+.+... ......|..+. ...|+|+..---. .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~----~~~D~vi~av~~~---~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQL---VDEAGQDLSLL----QTAKIIFLCTPIQ---L 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTS---CSEEESCGGGG----TTCSEEEECSCHH---H
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCC---CccccCCHHHh----CCCCEEEEECCHH---H
Confidence 577899886 43 44444444 5689999999988877654311 01122333332 3489988653221 2
Q ss_pred HHHHHHHHHhccCCCCEEE
Q 022929 191 PQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 191 ~~~~l~~~~~~L~pgG~l~ 209 (290)
...+++++...++++..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 2467778888888877654
No 422
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=78.31 E-value=7 Score=35.26 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=55.6
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----------------CCCceEEEcCCCCCCCCC
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----------------LKECKIVEGDAEDLPFPT 173 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------------~~~v~~~~~d~~~l~~~~ 173 (290)
.+|.=||+|. |. ++..+++. +.+|+++|.+++.++..++... ..++. ...|..+. .
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~-~t~d~~ea-~-- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLR-FGTEIEQA-V-- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEE-EESCHHHH-G--
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEE-EECCHHHH-H--
Confidence 4688899985 43 44445554 6799999999998887765321 01121 12222110 1
Q ss_pred CCccEEEecCccc----ccC---CHHHHHHHHHhccCCCCEEEEEcc
Q 022929 174 DYADRYVSAGSIE----YWP---DPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 174 ~~~D~i~~~~~l~----~~~---~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
...|+|+..---. ..+ ....+++.+...|++|..++..+.
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 2378887642111 011 234678888888988776665553
No 423
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=77.74 E-value=14 Score=30.84 Aligned_cols=101 Identities=13% Similarity=0.041 Sum_probs=61.3
Q ss_pred CCCEEEEEcCccc-----hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC-CCCceEEEcCCCCCC-----C-----CC
Q 022929 110 RNMLVVDVGGGTG-----FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECKIVEGDAEDLP-----F-----PT 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G-----~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~v~~~~~d~~~l~-----~-----~~ 173 (290)
.++++|=.|++.| .++..+++. +.+|+.++.++...+.+++... ..++.++..|+.+.. + .-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5788999997633 244555555 7899999998654443332211 125778889987632 0 01
Q ss_pred CCccEEEecCcccc-------c--CCHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 174 DYADRYVSAGSIEY-------W--PDPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 174 ~~~D~i~~~~~l~~-------~--~~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.|+++.+-.... + .+.+ .+++.+...++.+|.++...
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 35899987655432 0 1111 35556667777788887764
No 424
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=76.80 E-value=15 Score=27.16 Aligned_cols=96 Identities=10% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCEEEEEcCccchhHHHHHhhC--CCCeEEEEeCC-HHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecC
Q 022929 111 NMLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQS-PHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAG 183 (290)
Q Consensus 111 ~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s-~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~ 183 (290)
..+|+=+|+|. .+..+++.+ .+.+|+.+|.+ ++..+...+.. ..++.++.+|..+.. ..-..+|+|++..
T Consensus 3 ~~~vlI~G~G~--vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSI--LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 45688888763 333333221 26789999997 45444443321 135788899886531 1123588888653
Q ss_pred cccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 184 SIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 184 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
--. .....+....+.+.|...++...
T Consensus 80 ~~d---~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 80 DND---ADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp SCH---HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred CCh---HHHHHHHHHHHHHCCCCEEEEEE
Confidence 211 11234445556666767776643
No 425
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.71 E-value=41 Score=30.01 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=57.4
Q ss_pred CCCEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----------------CCCceEEEcCCCCCCC
Q 022929 110 RNMLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----------------LKECKIVEGDAEDLPF 171 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------------~~~v~~~~~d~~~l~~ 171 (290)
.+.++-=||.|. |. ++..+++. +.+|+++|++++.++...+... ..++.+ ..|+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~-ttd~----- 81 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKV-STTP----- 81 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESSC-----
T ss_pred cCCccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEE-eCch-----
Confidence 567777889986 54 44555555 7899999999999888765311 011222 2232
Q ss_pred CCCCccEEEecCccc------ccCCH---HHHHHHHHhccCCCCEEEEEccCCC
Q 022929 172 PTDYADRYVSAGSIE------YWPDP---QRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~------~~~~~---~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
...|+|+..---. ..+|. ....+.+...|++|..++..+...+
T Consensus 82 --~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~p 133 (431)
T 3ojo_A 82 --EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAP 133 (431)
T ss_dssp --CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCT
T ss_pred --hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCCh
Confidence 1378887642211 11232 3566788888998876666554443
No 426
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=76.11 E-value=27 Score=27.61 Aligned_cols=70 Identities=13% Similarity=0.079 Sum_probs=45.7
Q ss_pred EEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-------CCCCCccEEEec
Q 022929 113 LVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-------FPTDYADRYVSA 182 (290)
Q Consensus 113 ~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-------~~~~~~D~i~~~ 182 (290)
+||=.|++.|. ++..+++. +.+|+.++.+++.++.+.+.. ..++.++..|+.+.. -..+.+|+++.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 46667766542 33444444 789999999998887776654 346788888987632 112336988876
Q ss_pred Ccc
Q 022929 183 GSI 185 (290)
Q Consensus 183 ~~l 185 (290)
-..
T Consensus 80 Ag~ 82 (230)
T 3guy_A 80 AGS 82 (230)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 427
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.69 E-value=19 Score=29.64 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=61.7
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCC------------HHHHHHHhhhC--CCCCceEEEcCCCCCC--
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS------------PHQLAKAKQKE--PLKECKIVEGDAEDLP-- 170 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s------------~~~~~~a~~~~--~~~~v~~~~~d~~~l~-- 170 (290)
.++++|=.|++.|. ++..+++. +.+|+.+|.+ .+.++.+.... ...++.++..|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 56889988887653 44455555 7899999987 55444433221 1246788899987632
Q ss_pred ---CC-----CCCccEEEecCccccc----CC--HH-----------HHHHHHHhccCCCCEEEEEc
Q 022929 171 ---FP-----TDYADRYVSAGSIEYW----PD--PQ-----------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 171 ---~~-----~~~~D~i~~~~~l~~~----~~--~~-----------~~l~~~~~~L~pgG~l~i~~ 212 (290)
+. -++.|+++.+-..... +. .+ .+++.+...++.+|.++...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 00 1358999876544321 11 11 34566667777888887764
No 428
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=75.38 E-value=30 Score=28.72 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=54.4
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEE------cCCC--CC-CCCC--CCccE
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE------GDAE--DL-PFPT--DYADR 178 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~------~d~~--~l-~~~~--~~~D~ 178 (290)
.+|.=||+|. |. ++..+++. +.+|+.+|.+++.++..++.. +.... ..+. .. .... ..+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNG----LIADFNGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHC----EEEEETTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCC----EEEEeCCCeeEecceeecchhhcccCCCCCE
Confidence 4788999985 43 44445544 679999999998887776542 11111 0110 10 0111 14898
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
|+..---. ....+++.+...++++..++...
T Consensus 78 vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 78 IIALTKAQ---QLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp EEECSCHH---HHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEeccc---cHHHHHHHHHHhcCCCCEEEEec
Confidence 88653221 23567888888888887666543
No 429
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=74.98 E-value=13 Score=31.02 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=63.0
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||+|. | .++..+++. +.+|+++|.+++..+.+.+. ++.. ..+..+. . ...|+|+.. ++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~----g~~~-~~~~~~~-~--~~aDvvi~~-----vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA----GASA-ARSARDA-V--QGADVVISM-----LP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT----TCEE-CSSHHHH-H--TTCSEEEEC-----CS
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC----CCeE-cCCHHHH-H--hCCCeEEEE-----CC
Confidence 5788899996 4 345555555 67999999999888877653 2221 1121110 1 237888864 33
Q ss_pred CH---HHHHH---HHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 190 DP---QRGIR---EAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 190 ~~---~~~l~---~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
++ +.++. ++...++++..++-.....+. +.+++.+.+.+.|...+..
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~---------------~~~~l~~~~~~~g~~~~~~ 121 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPT---------------SARKIHAAARERGLAMLDA 121 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHH---------------HHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHH---------------HHHHHHHHHHHcCCEEEEE
Confidence 33 34554 566677777765443322211 1245556666667665543
No 430
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=74.92 E-value=3.5 Score=34.09 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=31.5
Q ss_pred HHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 192 QRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 192 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
...++++.++|+|+|.+++... .. ....+..++.+.||.......+
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~~---d~--------------~~~~~~~~~~~~gf~~~~~iiW 99 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFNT---PF--------------NCAFICQYLVSKGMIFQNWITW 99 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC---HH--------------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEcC---cH--------------HHHHHHHHHHhhccceeEEEEE
Confidence 3678888999999999988631 11 0133556778889977665544
No 431
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=74.53 E-value=24 Score=29.28 Aligned_cols=101 Identities=19% Similarity=0.240 Sum_probs=60.3
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHH-HHHHHhhh--CCCCCceEEEcCCCCCC-----CC-----C
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPH-QLAKAKQK--EPLKECKIVEGDAEDLP-----FP-----T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~-~~~~a~~~--~~~~~v~~~~~d~~~l~-----~~-----~ 173 (290)
.++++|=.|++.|. ++..+++. +.+|+.++.+++ ..+...+. ....++.++..|+.+.. +. -
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57889988877653 44445555 789999988754 22222221 12246788899987632 00 1
Q ss_pred CCccEEEecCccccc-C-----CHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 174 DYADRYVSAGSIEYW-P-----DPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~-~-----~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.|+++.+-..... . +.+ .+++.+...++.+|.++...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 358999876433211 1 111 35566677788888887764
No 432
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=74.40 E-value=3.4 Score=30.70 Aligned_cols=41 Identities=12% Similarity=-0.074 Sum_probs=30.1
Q ss_pred CCCCCCccEEEecCccc--ccCCHHHHHHHHHhccCCCCEEEE
Q 022929 170 PFPTDYADRYVSAGSIE--YWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~--~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
.++...||.|+...--. +..-+.+++..+...|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45677899998643322 122347899999999999999975
No 433
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=74.36 E-value=15 Score=29.92 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=48.4
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----CCCceEEEcCCCCCC-----CC-----
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECKIVEGDAEDLP-----FP----- 172 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~v~~~~~d~~~l~-----~~----- 172 (290)
.++++|=.|++.|. ++..+++. +.+|++++.+++..+...+... ..++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 45788888876542 33444444 7899999998876554432221 235778889987632 00
Q ss_pred CCCccEEEecCcccccCCH
Q 022929 173 TDYADRYVSAGSIEYWPDP 191 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~~~~~ 191 (290)
-++.|+++.+-......+.
T Consensus 84 ~g~id~lv~~Ag~~~~~~~ 102 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNEKNW 102 (267)
T ss_dssp HSCCCEEEECCCCCCSSSH
T ss_pred cCCCCEEEECCCCCChhhH
Confidence 1358999877654433343
No 434
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=74.32 E-value=5 Score=34.78 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCC---CC-CC-CCCCccEEEec
Q 022929 109 NRNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAE---DL-PF-PTDYADRYVSA 182 (290)
Q Consensus 109 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~---~l-~~-~~~~~D~i~~~ 182 (290)
+++++||-+|+|. |..+..+++..++.+|+++|.+++-++.+++... . .++..+-. .+ .. ....+|+|+-.
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~v~~~~~g~g~Dvvid~ 261 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA-D--HVVDARRDPVKQVMELTRGRGVNVAMDF 261 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC-S--EEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC-C--EEEeccchHHHHHHHHhCCCCCcEEEEC
Confidence 4789999999874 7777788887635699999999999998885422 1 12221111 00 01 12259999854
Q ss_pred CcccccCCHH-HHHHHHHhccCCCCEEEEEcc
Q 022929 183 GSIEYWPDPQ-RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 183 ~~l~~~~~~~-~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-. ... ..++...+. ++|.+++...
T Consensus 262 ~G-----~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 262 VG-----SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp SC-----CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred CC-----CchHHHHHHHhhc--CCCEEEEEeC
Confidence 32 211 145556666 8999887654
No 435
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=73.68 E-value=5.7 Score=35.95 Aligned_cols=67 Identities=21% Similarity=0.368 Sum_probs=47.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEe
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVS 181 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~ 181 (290)
..++|+=+|||. .+..+++.+ .+..|+.+|.+++.++.+.+.+ .+..+.+|..+.. ..-+.+|++++
T Consensus 2 ~~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 2 NAMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CCEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CcCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 346788888874 444455443 2678999999999999887665 4678899987642 11235898886
No 436
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=73.38 E-value=9.9 Score=34.35 Aligned_cols=93 Identities=22% Similarity=0.155 Sum_probs=56.2
Q ss_pred CCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-------------CC----CCceEEEcCCCCCCC
Q 022929 111 NMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------------PL----KECKIVEGDAEDLPF 171 (290)
Q Consensus 111 ~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------~~----~~v~~~~~d~~~l~~ 171 (290)
-.+|.-||+|. | .++..++.. +.+|+++|.+++.++.+++.. .. .....+..|... +
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~--~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE--L 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG--G
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH--H
Confidence 46799999997 4 355555555 689999999998887765411 00 011112334322 1
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
...|+|+..-. ....-...+++++...++|+..++.
T Consensus 113 --~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 --STVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --TTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 23798886432 1111124688888889988876654
No 437
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=73.32 E-value=28 Score=29.52 Aligned_cols=114 Identities=14% Similarity=-0.042 Sum_probs=64.6
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCC-CeEEEEeCCH-------HHHHHHhhhCCCCCceEEEc-CCCCCCCCCCCccEEE
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDA-KNVTILDQSP-------HQLAKAKQKEPLKECKIVEG-DAEDLPFPTDYADRYV 180 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~-~~v~~vD~s~-------~~~~~a~~~~~~~~v~~~~~-d~~~l~~~~~~~D~i~ 180 (290)
.+|.=||+|. |. ++..+++. + .+|++.|.++ +..+.+.+. ++ .. +..+. . ...|+|+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~----g~---~~~s~~e~-~--~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAEL----GV---EPLDDVAG-I--ACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHT----TC---EEESSGGG-G--GGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHC----CC---CCCCHHHH-H--hcCCEEE
Confidence 5799999985 43 44455554 6 7999999987 444444322 22 22 33221 1 2378888
Q ss_pred ecCcccccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 181 SAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 181 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
..---. ...+.++.+...+++|..++-.....+. +...+.+.+++.|...++.--.+
T Consensus 93 ~avp~~---~~~~~~~~i~~~l~~~~ivv~~st~~p~---------------~~~~~~~~l~~~g~~~~d~pv~g 149 (317)
T 4ezb_A 93 SLVVGA---ATKAVAASAAPHLSDEAVFIDLNSVGPD---------------TKALAAGAIATGKGSFVEGAVMA 149 (317)
T ss_dssp ECCCGG---GHHHHHHHHGGGCCTTCEEEECCSCCHH---------------HHHHHHHHHHTSSCEEEEEEECS
T ss_pred EecCCH---HHHHHHHHHHhhcCCCCEEEECCCCCHH---------------HHHHHHHHHHHcCCeEEeccCCC
Confidence 642211 1234567888888888766544322211 23456667777777655543333
No 438
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.18 E-value=18 Score=30.31 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=54.7
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEE-cCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~-~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.+++|+=||+|. |......+... +.+|+++|.+++..+.+.+. +++... .++.++ + ...|+|+.....+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~----g~~~~~~~~l~~~-l--~~aDvVi~~~p~~~ 227 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITEM----GLVPFHTDELKEH-V--KDIDICINTIPSMI 227 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----TCEEEEGGGHHHH-S--TTCSEEEECCSSCC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC----CCeEEchhhHHHH-h--hCCCEEEECCChhh
Confidence 689999999985 54444444454 57999999998766554431 223222 222211 1 24899998766543
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+. +.....++||+.++=...
T Consensus 228 i~------~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 228 LN------QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp BC------HHHHTTSCTTCEEEECSS
T ss_pred hC------HHHHHhCCCCCEEEEEeC
Confidence 32 234567899987755443
No 439
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=73.13 E-value=32 Score=28.41 Aligned_cols=89 Identities=18% Similarity=0.069 Sum_probs=53.0
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||+|. | .++..+++...+.+|+++|.+++..+.+.+... ......|..+. . ...|+|+..--...
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---~~~~~~~~~~~-~--~~aDvVilavp~~~-- 78 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI---VDEATADFKVF-A--ALADVIILAVPIKK-- 78 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS---CSEEESCTTTT-G--GGCSEEEECSCHHH--
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC---cccccCCHHHh-h--cCCCEEEEcCCHHH--
Confidence 5788999986 3 344555554225689999999988877654311 11123333321 1 24798886432221
Q ss_pred CHHHHHHHHHhc-cCCCCEEE
Q 022929 190 DPQRGIREAYRV-LKLGGKAC 209 (290)
Q Consensus 190 ~~~~~l~~~~~~-L~pgG~l~ 209 (290)
...+++++... ++++..++
T Consensus 79 -~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 79 -TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp -HHHHHHHHHTSCCCTTCEEE
T ss_pred -HHHHHHHHHhcCCCCCCEEE
Confidence 24577777777 87766554
No 440
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.08 E-value=16 Score=25.14 Aligned_cols=69 Identities=23% Similarity=0.181 Sum_probs=42.8
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~ 183 (290)
...+|+=+|+|. |......+...+..+++++|.+++..+... ..++.+...|+.+.. .. ..+|+|+..-
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKAL-GGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHHT-TTCSEEEECS
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHHHH-cCCCEEEECC
Confidence 346899999953 332222222332278999999998877665 235677777775421 11 2489888654
No 441
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=73.01 E-value=23 Score=27.88 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=53.2
Q ss_pred EEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCccc
Q 022929 113 LVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGSIE 186 (290)
Q Consensus 113 ~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~l~ 186 (290)
+|+=+|+|. ++..+++.+ .+..|+.+|.+++.++...+.. +..++.+|..+.. ..-..+|+|++..
T Consensus 2 ~iiIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~--- 73 (218)
T 3l4b_C 2 KVIIIGGET--TAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---KATIIHGDGSHKEILRDAEVSKNDVVVILT--- 73 (218)
T ss_dssp CEEEECCHH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHHHHHHHTCCTTCEEEECC---
T ss_pred EEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHHHHHhcCcccCCEEEEec---
Confidence 477788754 443333321 2679999999999887755432 4678888886532 1123589888643
Q ss_pred ccCCHH--HHHHHHHhccCCCCEEEEE
Q 022929 187 YWPDPQ--RGIREAYRVLKLGGKACII 211 (290)
Q Consensus 187 ~~~~~~--~~l~~~~~~L~pgG~l~i~ 211 (290)
++.. ..+..+.+.+.+...++..
T Consensus 74 --~~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 74 --PRDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp --SCHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred --CCcHHHHHHHHHHHHHcCCCeEEEE
Confidence 2222 3444455555566666553
No 442
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=72.78 E-value=35 Score=27.37 Aligned_cols=102 Identities=18% Similarity=0.097 Sum_probs=57.3
Q ss_pred CCCEEEEEcCccchhHHHHHhhC--CCCe-EEEEeCCH--HHHHHHhhhCCCCCceEEEcCCCCC-C-----CC-----C
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV--DAKN-VTILDQSP--HQLAKAKQKEPLKECKIVEGDAEDL-P-----FP-----T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~-v~~vD~s~--~~~~~a~~~~~~~~v~~~~~d~~~l-~-----~~-----~ 173 (290)
+++++|=.|++ |.++..+++.+ .+.+ |+.++.++ +.++...+.....++.++..|+.+. . +. -
T Consensus 4 ~~k~vlVtGas-~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAAL-GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 46788888864 55555544432 1565 88888764 4444444433334578888998764 1 00 0
Q ss_pred CCccEEEecCcccccCCHH-----------HHHHHHHhccCC-----CCEEEEEc
Q 022929 174 DYADRYVSAGSIEYWPDPQ-----------RGIREAYRVLKL-----GGKACIIG 212 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~~~~-----------~~l~~~~~~L~p-----gG~l~i~~ 212 (290)
+++|+++.+-......+.+ .+++.+...++. +|.++...
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 2589998766544333433 234444454432 46666653
No 443
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=72.50 E-value=14 Score=33.64 Aligned_cols=123 Identities=12% Similarity=0.021 Sum_probs=68.3
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEE-EcCCCCCCCCCCCccEEEecCccccc
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIV-EGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~-~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.+|-=||+|. | .++..+++. +.+|++.|.+++.++.+.+.... +..+. ..+..++--.-...|+|+..---.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~-g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~-- 79 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK-GTKVVGAQSLKEMVSKLKKPRRIILLVKAG-- 79 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT-TSSCEECSSHHHHHHTBCSSCEEEECSCSS--
T ss_pred CEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccC-CCceeccCCHHHHHhhccCCCEEEEecCCh--
Confidence 4688899885 4 345555555 67999999999988877654211 11111 122211100001368887532110
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRI 254 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 254 (290)
...+.+++++...|++|..++-.....+. +...+.+.+++.|...+..-..
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~---------------~t~~~~~~l~~~Gi~fvd~pVs 130 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYR---------------DTTRRCRDLKAKGILFVGSGVS 130 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHH---------------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCch---------------HHHHHHHHHHhhccccccCCcc
Confidence 11246788899999988766544333211 1234445667778776665433
No 444
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=72.15 E-value=14 Score=31.34 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=65.1
Q ss_pred CCCEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
...+|.=||+|. |. ++..+++. +.+|++.|.+++..+.+.+. ++.. ..+..+. . ...|+|+..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~----g~~~-~~~~~e~-~--~~aDvVi~~----- 94 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL----GATI-HEQARAA-A--RDADIVVSM----- 94 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT----TCEE-ESSHHHH-H--TTCSEEEEC-----
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC----CCEe-eCCHHHH-H--hcCCEEEEE-----
Confidence 356899999996 43 44555555 67999999999988776643 2322 2222211 1 237888864
Q ss_pred cCCH---HHHHH--HHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 188 WPDP---QRGIR--EAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 188 ~~~~---~~~l~--~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
++++ +.++. .+...+++|..++-.....+. +.+.+.+.+++.|...+..
T Consensus 95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~---------------~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPR---------------EARDHAARLGALGIAHLDT 148 (320)
T ss_dssp CSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHH---------------HHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHH---------------HHHHHHHHHHHcCCEEEeC
Confidence 2333 23444 566677887766554432221 2345556666667655443
No 445
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=72.06 E-value=4.3 Score=35.13 Aligned_cols=93 Identities=12% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEE-EeCCH---HHHHHHhhhCCCCCceEEEc------CCCCCCCCCCCc
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTI-LDQSP---HQLAKAKQKEPLKECKIVEG------DAEDLPFPTDYA 176 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~-vD~s~---~~~~~a~~~~~~~~v~~~~~------d~~~l~~~~~~~ 176 (290)
+++++||-+|+ | .|..+..+++.. +.++++ ++.++ +..+.+++... . .++.. ++.++.-....+
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGA-E--HVITEEELRRPEMKNFFKDMPQP 241 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTC-S--EEEEHHHHHSGGGGGTTSSSCCC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCC-c--EEEecCcchHHHHHHHHhCCCCc
Confidence 47899999997 4 588888998886 455544 55433 23455654321 1 12221 111111111148
Q ss_pred cEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 177 DRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 177 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
|+|+-.-. . . .+....++|+++|.+++..
T Consensus 242 Dvvid~~g-----~-~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 242 RLALNCVG-----G-K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SEEEESSC-----H-H-HHHHHHTTSCTTCEEEECC
T ss_pred eEEEECCC-----c-H-HHHHHHHhhCCCCEEEEEe
Confidence 99885422 1 1 2345789999999998864
No 446
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=71.84 E-value=18 Score=29.82 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCC----------CCCC
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLP----------FPTD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~----------~~~~ 174 (290)
+++++|=-|++.|. .+..+++. +.+|+.+|.+++.++.+.+... ..++.++..|+.+.. -.-+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 67888888887763 45556666 8999999999987766543321 235677788886631 1124
Q ss_pred CccEEEecCccc
Q 022929 175 YADRYVSAGSIE 186 (290)
Q Consensus 175 ~~D~i~~~~~l~ 186 (290)
+.|+++.+-...
T Consensus 86 ~iDiLVNNAG~~ 97 (255)
T 4g81_D 86 HVDILINNAGIQ 97 (255)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCCCC
Confidence 699998865443
No 447
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=71.31 E-value=22 Score=32.20 Aligned_cols=100 Identities=19% Similarity=0.080 Sum_probs=58.2
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC---C------------CceEEEcCCCCCCCCCC
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---K------------ECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---~------------~v~~~~~d~~~l~~~~~ 174 (290)
.+|.=||+|. |. ++..+++..++.+|+++|.+++.++..++.... . ++. ...|..+ .. .
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~-~t~~~~~-~~--~ 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLF-FSSDIPK-AI--A 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEE-EESCHHH-HH--H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEE-EECCHHH-Hh--h
Confidence 5899999996 43 555666653357999999999988877643110 1 111 1112100 01 2
Q ss_pred CccEEEecCc--cc-------ccCC---HHHHHHHHHhccCCCCEEEEEccCC
Q 022929 175 YADRYVSAGS--IE-------YWPD---PQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 175 ~~D~i~~~~~--l~-------~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
..|+|+..-- .+ ..++ ....++.+...+++|..++..+...
T Consensus 86 ~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 86 EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3788876521 11 1122 4567888889999877665544433
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=71.30 E-value=12 Score=31.00 Aligned_cols=85 Identities=9% Similarity=0.020 Sum_probs=48.1
Q ss_pred EEEEEcCcc-chh-HHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccCC
Q 022929 113 LVVDVGGGT-GFT-TLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPD 190 (290)
Q Consensus 113 ~vLDiG~G~-G~~-~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~~ 190 (290)
+|.=||+|. |.. +..+++ +.+|+++|.+++..+.+.+. ++... +..+. . ...|+|+..---. ..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~----g~~~~--~~~~~-~--~~~D~vi~~v~~~--~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE----FGSEA--VPLER-V--AEARVIFTCLPTT--RE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH----HCCEE--CCGGG-G--GGCSEEEECCSSH--HH
T ss_pred eEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC----CCccc--CHHHH-H--hCCCEEEEeCCCh--HH
Confidence 577889986 443 333433 56899999998877666543 12221 11111 1 2489888642211 01
Q ss_pred HHHHHHHHHhccCCCCEEEEE
Q 022929 191 PQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 191 ~~~~l~~~~~~L~pgG~l~i~ 211 (290)
.+.+++.+...+++|..++..
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEEEC
Confidence 234667777788877665544
No 449
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=71.22 E-value=16 Score=30.51 Aligned_cols=89 Identities=10% Similarity=0.044 Sum_probs=53.7
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEE-cCCCCCCCCCCCccEEEecCcccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVE-GDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~-~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.+++|+=||+|. |......+..+ +.+|+++|.+++..+.+.+. +++... .++.++ + ...|+|+...-.+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~----g~~~~~~~~l~~~-l--~~aDvVi~~~p~~~ 225 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEM----GMEPFHISKAAQE-L--RDVDVCINTIPALV 225 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----TSEEEEGGGHHHH-T--TTCSEEEECCSSCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHC----CCeecChhhHHHH-h--cCCCEEEECCChHH
Confidence 689999999985 55444444554 56999999998766555432 233322 122111 1 24899988655432
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEEc
Q 022929 188 WPDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
+. . +....++||+.++-..
T Consensus 226 i~-~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 226 VT-A-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp BC-H-----HHHHHSCTTCEEEECS
T ss_pred hC-H-----HHHHhcCCCCEEEEec
Confidence 22 1 2345689998776554
No 450
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=71.06 E-value=22 Score=31.67 Aligned_cols=93 Identities=13% Similarity=-0.024 Sum_probs=52.9
Q ss_pred EEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC----------------CCCceEEEcCCCCCCCCCC
Q 022929 113 LVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----------------LKECKIVEGDAEDLPFPTD 174 (290)
Q Consensus 113 ~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----------------~~~v~~~~~d~~~l~~~~~ 174 (290)
+|.=||+|. |. ++..+++. +.+|+++|.+++.++..++... ..++.+ ..|..+ .. .
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~-~~--~ 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKK-AV--L 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHH-HH--H
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHH-Hh--c
Confidence 577789886 43 44455554 6799999999998887765311 001211 122111 01 1
Q ss_pred CccEEEecCcccc----cCC---HHHHHHHHHhccCC---CCEEEEE
Q 022929 175 YADRYVSAGSIEY----WPD---PQRGIREAYRVLKL---GGKACII 211 (290)
Q Consensus 175 ~~D~i~~~~~l~~----~~~---~~~~l~~~~~~L~p---gG~l~i~ 211 (290)
..|+|+..---.. .+| ....++.+...+++ +..++..
T Consensus 76 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~ 122 (436)
T 1mv8_A 76 DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVR 122 (436)
T ss_dssp TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEEC
T ss_pred cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEe
Confidence 3788876432111 122 45778888888988 5555443
No 451
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=70.69 E-value=2.3 Score=37.01 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=55.4
Q ss_pred CCC-CEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHH----HHHHHhhhCCCCCceEEEc------CCC-CCC-C--
Q 022929 109 NRN-MLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPH----QLAKAKQKEPLKECKIVEG------DAE-DLP-F-- 171 (290)
Q Consensus 109 ~~~-~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~v~~~~~------d~~-~l~-~-- 171 (290)
+++ .+||-+|+ | .|..+..+++.. +.+++++.-+++ ..+.+++... . ..+.. |+. .+. .
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGA-T--QVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTC-S--EEEEHHHHHCGGGHHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCC-e--EEEecCccchHHHHHHHHHHhh
Confidence 378 99999997 4 488888888876 567777754432 2445544321 1 12221 110 000 0
Q ss_pred -CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 172 -PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 172 -~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
....+|+|+-.-. ..... ...++|+++|.++....
T Consensus 241 ~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 241 QSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECCC
T ss_pred ccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEecC
Confidence 1235999985432 12233 67799999999988653
No 452
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=70.46 E-value=24 Score=28.74 Aligned_cols=73 Identities=8% Similarity=-0.056 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcc--c---hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh---CCCCCceEEEcCCCCCC----------C
Q 022929 110 RNMLVVDVGGGT--G---FTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECKIVEGDAEDLP----------F 171 (290)
Q Consensus 110 ~~~~vLDiG~G~--G---~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~---~~~~~v~~~~~d~~~l~----------~ 171 (290)
+++++|=-|+++ | .++..+++. +.+|+.+|.+++.++.+.+. ....++.++..|+.+.. -
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 678899888643 3 245566666 89999999987665554433 22346788899986632 0
Q ss_pred CCCCccEEEecCc
Q 022929 172 PTDYADRYVSAGS 184 (290)
Q Consensus 172 ~~~~~D~i~~~~~ 184 (290)
.-++.|+++.+-.
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 0146898887543
No 453
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=69.51 E-value=19 Score=29.50 Aligned_cols=69 Identities=20% Similarity=0.253 Sum_probs=48.1
Q ss_pred CEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----------CCCCCccE
Q 022929 112 MLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----------FPTDYADR 178 (290)
Q Consensus 112 ~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----------~~~~~~D~ 178 (290)
++||=-|++.|. ++..+++. +.+|+.+|.+++..+...+.. .++.++..|+.+.. -.-++.|+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 577877887763 55566666 899999999998877665443 46778889987632 00146899
Q ss_pred EEecCc
Q 022929 179 YVSAGS 184 (290)
Q Consensus 179 i~~~~~ 184 (290)
++.+-.
T Consensus 79 LVNNAG 84 (247)
T 3ged_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 887543
No 454
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=69.39 E-value=37 Score=26.23 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=54.0
Q ss_pred EEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCC-CCCCccEEEecCccccc-
Q 022929 113 LVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPF-PTDYADRYVSAGSIEYW- 188 (290)
Q Consensus 113 ~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~-~~~~~D~i~~~~~l~~~- 188 (290)
+||=.|+ +|.++..+++.+ .+.+|++++-+++...... .+++++.+|+.+... .-..+|+|+........
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~ 75 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDE 75 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTT
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhhhhhcCCCEEEECCcCCccc
Confidence 5776764 444444444332 2689999999877655432 478899999866431 01248999876544211
Q ss_pred -CCHHHHHHHHHhccCC--CCEEEEEc
Q 022929 189 -PDPQRGIREAYRVLKL--GGKACIIG 212 (290)
Q Consensus 189 -~~~~~~l~~~~~~L~p--gG~l~i~~ 212 (290)
.......+++.+.++. .+.+++..
T Consensus 76 ~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 76 AEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp TTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred cchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 1122344555555544 35666654
No 455
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=69.20 E-value=60 Score=31.21 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=62.8
Q ss_pred CCEEEEEcCcc--chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--------------CC---CceEEEcCCCCCCC
Q 022929 111 NMLVVDVGGGT--GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------------LK---ECKIVEGDAEDLPF 171 (290)
Q Consensus 111 ~~~vLDiG~G~--G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------------~~---~v~~~~~d~~~l~~ 171 (290)
-.+|--||+|. +.++..++.. +..|+..|++++.++.+++... .. .......|..++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL-- 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG--
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH--
Confidence 36899999997 2355555555 8999999999998887765311 00 011122232222
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 172 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
...|+|+ -.+.+.+.-.+++++++..+++|+..|.-.+-.
T Consensus 392 --~~aDlVI-EAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 --STVDLVV-EAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp --GSCSEEE-ECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred --hhCCEEE-EeccccHHHHHHHHHHHhhcCCCCceEEecCCc
Confidence 2378777 345555555568999999999999887654433
No 456
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=69.13 E-value=32 Score=28.14 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=48.5
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCH--HHHHHHhhhCCCCCceEEEcCCCCCC-----CCCCCccEE
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSP--HQLAKAKQKEPLKECKIVEGDAEDLP-----FPTDYADRY 179 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~~~~~D~i 179 (290)
+++++|=-|+++|. .+..|++. +.+|+.+|.+. +..+..++.. .++.++..|+.+.. +..++.|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 57888888887764 55666666 88999998873 4444444332 35778888886532 344679999
Q ss_pred EecCcc
Q 022929 180 VSAGSI 185 (290)
Q Consensus 180 ~~~~~l 185 (290)
+.+-.+
T Consensus 84 VNNAGi 89 (247)
T 4hp8_A 84 VNNAGI 89 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 876544
No 457
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=68.68 E-value=34 Score=28.85 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=54.3
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC------CCCCceE----EEcCCCCCCCCCCCccEE
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE------PLKECKI----VEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~v~~----~~~d~~~l~~~~~~~D~i 179 (290)
.+|+=||+|. | .++..|++. +.+|+.++.++. +..++.. ......+ ...|..+. ...+|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~---~~~~DlV 75 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL---ETKPDCT 75 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGC---SSCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHc---CCCCCEE
Confidence 4788899996 4 445555554 679999998762 4444331 1111221 01122111 1258998
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+..-=-.... .+++.+...++++..++......
T Consensus 76 ilavK~~~~~---~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 76 LLCIKVVEGA---DRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp EECCCCCTTC---CHHHHHTTSCCTTCEEEEECSSS
T ss_pred EEecCCCChH---HHHHHHHhhcCCCCEEEEeCCCC
Confidence 8753333333 47788888999988777665443
No 458
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=68.56 E-value=22 Score=31.87 Aligned_cols=89 Identities=17% Similarity=0.133 Sum_probs=53.6
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.+++|+=+|+|. |......++.+ +.+|+++|.++.....+... +.+ ..++.+. + ...|+|+....-.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~~----G~~--v~~Leea-l--~~ADIVi~atgt~~l 288 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQACMD----GFR--LVKLNEV-I--RQVDIVITCTGNKNV 288 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----TCE--ECCHHHH-T--TTCSEEEECSSCSCS
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHHc----CCE--eccHHHH-H--hcCCEEEECCCCccc
Confidence 789999999997 55555555555 67999999998654444421 212 1222221 1 237988874221121
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
+-.+....+|+|+.++-...
T Consensus 289 -----I~~e~l~~MK~gailINvgr 308 (435)
T 3gvp_A 289 -----VTREHLDRMKNSCIVCNMGH 308 (435)
T ss_dssp -----BCHHHHHHSCTTEEEEECSS
T ss_pred -----CCHHHHHhcCCCcEEEEecC
Confidence 22356677899987766543
No 459
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.27 E-value=16 Score=32.87 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=59.8
Q ss_pred CCCEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---C-------------CCceEEEcCCCCCCC
Q 022929 110 RNMLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---L-------------KECKIVEGDAEDLPF 171 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~-------------~~v~~~~~d~~~l~~ 171 (290)
...+|-=||+|. |. ++..+++. +.+|+++|.+++.++...+... . .++. ...|..+ ..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~-~ttd~~e-a~ 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLS-FTTDLAE-GV 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEE-EESCHHH-HH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEE-EECCHHH-HH
Confidence 456888999996 54 44555555 7899999999988887765311 0 1111 1222211 01
Q ss_pred CCCCccEEEecC--cc---cccCC---HHHHHHHHHhccCCCCEEEEEccCC
Q 022929 172 PTDYADRYVSAG--SI---EYWPD---PQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 172 ~~~~~D~i~~~~--~l---~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
...|+|+..- -. ...+| .++.++.+...|++|..++..+...
T Consensus 83 --~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 132 (446)
T 4a7p_A 83 --KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP 132 (446)
T ss_dssp --TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred --hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 2378887641 11 11222 3567888899999988777765443
No 460
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=68.22 E-value=33 Score=27.95 Aligned_cols=102 Identities=19% Similarity=0.265 Sum_probs=60.2
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCC-HHHHHHHhhhC--CCCCceEEEcCCCCCC-----CC-----C
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS-PHQLAKAKQKE--PLKECKIVEGDAEDLP-----FP-----T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s-~~~~~~a~~~~--~~~~v~~~~~d~~~l~-----~~-----~ 173 (290)
.++++|=.|++.|. ++..+++. +.+|+.++.. ++..+...+.. ...++.++..|+.+.. +. -
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56788888876653 44445555 7889887753 44333332221 1246788899987632 00 1
Q ss_pred CCccEEEecCcccccC-----CHH--------------HHHHHHHhccCCCCEEEEEcc
Q 022929 174 DYADRYVSAGSIEYWP-----DPQ--------------RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~-----~~~--------------~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++.|+++.+-...... +.+ .+.+.+...++++|.++....
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 3589998764443221 111 355667777888888877644
No 461
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=67.86 E-value=43 Score=26.56 Aligned_cols=90 Identities=11% Similarity=0.043 Sum_probs=56.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC--CCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD--AKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAG 183 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~ 183 (290)
...+|+=+|+| ..+..+++.+. +. |+++|.+++.++.++ .++.++.+|..+.. ..-..+|.|++..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 34689999985 56666655542 35 999999988777665 25788999986532 1123589888643
Q ss_pred cccccCCHH--HHHHHHHhccCCCCEEEEEc
Q 022929 184 SIEYWPDPQ--RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 184 ~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.. ..+....+.+.|+..++...
T Consensus 80 -----~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 80 -----ESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -----SCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred -----CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 2222 23445556677776776653
No 462
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=67.66 E-value=13 Score=30.12 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=59.1
Q ss_pred CCCEEEEEcCccchhHHHHHhhC---CCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCC-----CC-----CC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV---DAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLP-----FP-----TD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~-----~~-----~~ 174 (290)
++++||=.|+ +|.++..+++.+ .+.+|++++.+++..+...+... ..++.++..|+.+.. +. .+
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4577886664 455555554432 26899999998765554433211 236788999987632 00 02
Q ss_pred CccEEEecCcccccC----C-HH--------------HHHHHHHhccCCCCEEEEEcc
Q 022929 175 YADRYVSAGSIEYWP----D-PQ--------------RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 175 ~~D~i~~~~~l~~~~----~-~~--------------~~l~~~~~~L~pgG~l~i~~~ 213 (290)
++|+++.+-...... . .+ .+++.+...++++|.++....
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 589988754332110 1 11 245556666666778777643
No 463
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=67.54 E-value=39 Score=28.50 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=57.8
Q ss_pred CCCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC---CCCceEE-----EcCCCCCCCCCCCccEE
Q 022929 110 RNMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECKIV-----EGDAEDLPFPTDYADRY 179 (290)
Q Consensus 110 ~~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~v~~~-----~~d~~~l~~~~~~~D~i 179 (290)
...+|.=||+|. | .++..+++. +.+|+.+ .+++.++..++... ..+..+. ..|... -..+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA----VQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG----GTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH----cCCCCEE
Confidence 457899999996 4 455555554 6789999 88888777765421 1111111 112211 1348988
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEEccCC
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPVY 215 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 215 (290)
+..---. ....+++.+...++++..++......
T Consensus 91 ilavk~~---~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 91 LFCVKST---DTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp EECCCGG---GHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred EEEcccc---cHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 8643222 34678889999999888776665444
No 464
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=67.38 E-value=28 Score=28.93 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=60.0
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCC--HHHHHHHhhh--CCCCCceEEEcCCCCCC-----CC-----
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS--PHQLAKAKQK--EPLKECKIVEGDAEDLP-----FP----- 172 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~--~~~~~v~~~~~d~~~l~-----~~----- 172 (290)
.++++|=.|++.|. ++..+++. +.+|+.+|.+ +...+...+. ....++.++..|+.+.. +.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56889988876653 44445555 7899999886 2333322221 11245778888886632 00
Q ss_pred CCCccEEEecCcccc-cC-----CHH--------------HHHHHHHhccCCCCEEEEEcc
Q 022929 173 TDYADRYVSAGSIEY-WP-----DPQ--------------RGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 173 ~~~~D~i~~~~~l~~-~~-----~~~--------------~~l~~~~~~L~pgG~l~i~~~ 213 (290)
-++.|+++.+..... .. +.+ .+++.+...++++|.++...-
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 135899987655432 11 111 355666777888898877643
No 465
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=66.91 E-value=33 Score=27.86 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=54.1
Q ss_pred CCEEEEEcCcc-ch-hHHHHHhhCCCCe-EEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 111 NMLVVDVGGGT-GF-TTLGIVKHVDAKN-VTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 111 ~~~vLDiG~G~-G~-~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
..+|.=||||. |. ++..+++. +.+ ++.+|.+++..+.+.+.. ++.. ..|..+. . ...|+|+..---..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~---g~~~-~~~~~~~-~--~~~Dvvi~av~~~~ 80 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKV---EAEY-TTDLAEV-N--PYAKLYIVSLKDSA 80 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHT---TCEE-ESCGGGS-C--SCCSEEEECCCHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHc---CCce-eCCHHHH-h--cCCCEEEEecCHHH
Confidence 35788999985 43 44445554 455 899999998887776543 2222 2333221 1 23899886533221
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEE
Q 022929 188 WPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
...+++.+...+++|..++-.
T Consensus 81 ---~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 81 ---FAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp ---HHHHHHHHHTTCCTTCEEEEC
T ss_pred ---HHHHHHHHHhhcCCCcEEEEC
Confidence 246777777778777766544
No 466
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=66.87 E-value=49 Score=28.02 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=51.5
Q ss_pred CCCEEEEEcCcc-chhHHHHHh-hCCCCeEEE-EeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVK-HVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~-vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
+..+|.=||||. |........ ..++.++++ +|.+++..+...+... +.....|..++ +.+..+|+|+....-.
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g---~~~~~~~~~~~-l~~~~~D~V~i~tp~~ 82 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG---VETTYTNYKDM-IDTENIDAIFIVAPTP 82 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC---CSEEESCHHHH-HTTSCCSEEEECSCGG
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC---CCcccCCHHHH-hcCCCCCEEEEeCChH
Confidence 346899999985 443333333 445677654 6999987765554432 21223344332 2223489998653211
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
...+.+...|+.|-.+++.-+.
T Consensus 83 ------~h~~~~~~al~~G~~v~~eKp~ 104 (346)
T 3cea_A 83 ------FHPEMTIYAMNAGLNVFCEKPL 104 (346)
T ss_dssp ------GHHHHHHHHHHTTCEEEECSCC
T ss_pred ------hHHHHHHHHHHCCCEEEEcCCC
Confidence 1233444566666666654343
No 467
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=66.46 E-value=12 Score=32.57 Aligned_cols=66 Identities=24% Similarity=0.241 Sum_probs=41.9
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-CC--CCCccEEEec
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-FP--TDYADRYVSA 182 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-~~--~~~~D~i~~~ 182 (290)
+..+|+=+|||. |......+.. ...++..|.+.+.++.+++. +..+..|+.+.. +. -...|+|++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~~~~-----~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD--EFDVYIGDVNNENLEKVKEF-----ATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHTTT-----SEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCCHHHHHHHHHHhc--CCCeEEEEcCHHHHHHHhcc-----CCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 457899999963 4443333333 46899999999988877643 345666765432 00 1348999874
No 468
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=66.42 E-value=9.7 Score=27.42 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=49.4
Q ss_pred CCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC----CCCCCccEEEecCcc
Q 022929 111 NMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP----FPTDYADRYVSAGSI 185 (290)
Q Consensus 111 ~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~----~~~~~~D~i~~~~~l 185 (290)
..+|+=+|+|. |......+... +.+|+++|.+++..+.+++ ....++.+|..+.. ..-+.+|+|+....-
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence 46799999853 33332222332 5789999999876654432 23456677765421 112358988864322
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
.. +....+....+.+.+. .++..
T Consensus 81 ~~--~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 81 NI--QASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp CH--HHHHHHHHHHHHTTCS-EEEEE
T ss_pred ch--HHHHHHHHHHHHcCCC-eEEEE
Confidence 10 1112333444445664 55443
No 469
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=66.18 E-value=8.5 Score=32.35 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=52.8
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||+|. |. ++..+++. +.+|++.|.+++.++.+.+. ++.+ ..|..+. -. .|+|+.. ++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~----g~~~-~~~~~~~---~~-aDvvi~~-----vp 79 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA----GATL-ADSVADV---AA-ADLIHIT-----VL 79 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT----TCEE-CSSHHHH---TT-SSEEEEC-----CS
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC----CCEE-cCCHHHH---Hh-CCEEEEE-----CC
Confidence 5788999986 43 44445444 67899999998877766543 2221 1222221 12 6888753 34
Q ss_pred CH---HHHHHHHHhccCCCCEEEEEc
Q 022929 190 DP---QRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 190 ~~---~~~l~~~~~~L~pgG~l~i~~ 212 (290)
++ +.+++.+...+++|..++-..
T Consensus 80 ~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 80 DDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp SHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 33 457788888888887765443
No 470
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=66.12 E-value=29 Score=28.50 Aligned_cols=90 Identities=12% Similarity=0.008 Sum_probs=52.0
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCC--eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccc
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEY 187 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~ 187 (290)
.+|.=||+|. |. ++..+++. +. +|+++|.+++.++.+++... ......|..+. ... ..|+|+..--..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~-~aDvVilavp~~- 73 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI---IDEGTTSIAKV-EDF-SPDFVMLSSPVR- 73 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS---CSEEESCGGGG-GGT-CCSEEEECSCHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCC---cccccCCHHHH-hcC-CCCEEEEcCCHH-
Confidence 3688899886 43 34444443 44 89999999988877764321 11112232221 110 489888643221
Q ss_pred cCCHHHHHHHHHhccCCCCEEEEE
Q 022929 188 WPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 188 ~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
....+++++...++++..++..
T Consensus 74 --~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 74 --TFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp --HHHHHHHHHHHHSCTTCEEEEC
T ss_pred --HHHHHHHHHHhhCCCCcEEEEC
Confidence 1235777788888888766543
No 471
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=65.82 E-value=40 Score=27.58 Aligned_cols=101 Identities=18% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCC-HHHHHHHhhhC--CCCCceEEEcCCCCCC-----CC-----C
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS-PHQLAKAKQKE--PLKECKIVEGDAEDLP-----FP-----T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s-~~~~~~a~~~~--~~~~v~~~~~d~~~l~-----~~-----~ 173 (290)
.++++|=.|++.|. ++..+++. +.+|+.++.+ .+..+...+.. ...++.++..|+.+.. +. -
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57889999987653 44455555 7889888654 33333322211 1245778889987632 00 1
Q ss_pred CCccEEEecCcccccC-----CHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 174 DYADRYVSAGSIEYWP-----DPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~~-----~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.|+++.+-...... +.+ .+++.+.+.++++|.++...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 3589998765433221 111 35566677788888887764
No 472
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=65.64 E-value=52 Score=28.10 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=54.3
Q ss_pred CCEEEEEcCcc-ch--hHHHHHhhCCCCeEEE-EeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccc
Q 022929 111 NMLVVDVGGGT-GF--TTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIE 186 (290)
Q Consensus 111 ~~~vLDiG~G~-G~--~~~~l~~~~~~~~v~~-vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~ 186 (290)
..+|.=||||. |. ++..+ ...++.++++ +|.+++..+...+.. ++... .|..++ +.+...|+|+...--.
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~~~a~~~---g~~~~-~~~~~l-l~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPAL-EAEPLTEVTAIASRRWDRAKRFTERF---GGEPV-EGYPAL-LERDDVDAVYVPLPAV 100 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHH-HHCTTEEEEEEEESSHHHHHHHHHHH---CSEEE-ESHHHH-HTCTTCSEEEECCCGG
T ss_pred ceEEEEEcCcHHHHHHHHHHH-HhCCCeEEEEEEcCCHHHHHHHHHHc---CCCCc-CCHHHH-hcCCCCCEEEECCCcH
Confidence 36899999985 54 33444 3456778775 599987666554433 23333 555443 2233489988642211
Q ss_pred ccCCHHHHHHHHHhccCCCCEEEEEccCCCc
Q 022929 187 YWPDPQRGIREAYRVLKLGGKACIIGPVYPT 217 (290)
Q Consensus 187 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 217 (290)
.-.+.+...|+.|-.+++.-|....
T Consensus 101 ------~h~~~~~~al~aGk~Vl~EKP~a~~ 125 (350)
T 3rc1_A 101 ------LHAEWIDRALRAGKHVLAEKPLTTD 125 (350)
T ss_dssp ------GHHHHHHHHHHTTCEEEEESSSCSS
T ss_pred ------HHHHHHHHHHHCCCcEEEeCCCCCC
Confidence 1233455566777777776665443
No 473
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=65.60 E-value=25 Score=31.94 Aligned_cols=91 Identities=18% Similarity=0.059 Sum_probs=56.6
Q ss_pred CEEEEEcCcc--chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhh--------CCCC------------CceEEEcCCCCC
Q 022929 112 MLVVDVGGGT--GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK--------EPLK------------ECKIVEGDAEDL 169 (290)
Q Consensus 112 ~~vLDiG~G~--G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~--------~~~~------------~v~~~~~d~~~l 169 (290)
.+|.=||+|. +.++..+++. +..|+..|.+++.++.+++. .... ++. ...|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLI-PVTDIHA- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEE-EECCGGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcee-EeCCHHH-
Confidence 4677889986 3456666665 78999999999998887653 1111 122 2233322
Q ss_pred CCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEE
Q 022929 170 PFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACI 210 (290)
Q Consensus 170 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 210 (290)
+ ...|+|+..- .....-.+.+++++...++|+..+..
T Consensus 82 -~--~~aDlVIeAV-pe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 82 -L--AAADLVIEAA-SERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp -G--GGCSEEEECC-CCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -h--cCCCEEEEcC-CCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 2 2379888542 11111124688899999998887654
No 474
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.53 E-value=55 Score=26.77 Aligned_cols=73 Identities=10% Similarity=-0.001 Sum_probs=46.7
Q ss_pred CCCEEEEEcCc--cc---hhHHHHHhhCCCCeEEEEeCCH--HHHHHHhhhCCCCCceEEEcCCCCCC-----C-----C
Q 022929 110 RNMLVVDVGGG--TG---FTTLGIVKHVDAKNVTILDQSP--HQLAKAKQKEPLKECKIVEGDAEDLP-----F-----P 172 (290)
Q Consensus 110 ~~~~vLDiG~G--~G---~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~v~~~~~d~~~l~-----~-----~ 172 (290)
+++++|=.|++ .| .++..+++. +.+|+.++.++ +.++...+.. .++.++..|+.+.. + .
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence 56889988854 33 244555555 78999999876 5555544433 25788999987632 0 0
Q ss_pred CCCccEEEecCccc
Q 022929 173 TDYADRYVSAGSIE 186 (290)
Q Consensus 173 ~~~~D~i~~~~~l~ 186 (290)
-++.|+++.+-...
T Consensus 101 ~g~id~li~nAg~~ 114 (280)
T 3nrc_A 101 WDGLDAIVHSIAFA 114 (280)
T ss_dssp CSSCCEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 13589998765543
No 475
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=65.10 E-value=49 Score=30.10 Aligned_cols=88 Identities=19% Similarity=0.219 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.+++++=+|+|. |......+... +.+|+++|.++.....+.... .. ..+..+. ...+|+++....-.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~~~a~~Aa~~g----~d--v~~lee~---~~~aDvVi~atG~~~v 333 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDPICALQATMEG----LQ--VLTLEDV---VSEADIFVTTTGNKDI 333 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTT----CE--ECCGGGT---TTTCSEEEECSSCSCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhC----Cc--cCCHHHH---HHhcCEEEeCCCChhh
Confidence 689999999982 22222222233 689999999987766555332 11 2222221 1248987754322222
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEc
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~ 212 (290)
- -++..+.+++++.++-..
T Consensus 334 l-----~~e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 334 I-----MLDHMKKMKNNAIVCNIG 352 (488)
T ss_dssp B-----CHHHHTTSCTTEEEEESS
T ss_pred h-----hHHHHHhcCCCeEEEEcC
Confidence 1 133567788888776544
No 476
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=65.06 E-value=68 Score=29.02 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=58.5
Q ss_pred CCCEEEEEcCcc-ch-hHHHHHhhCCCC-eEEEEeCCHH----HHHHHhhhCC------------------CCCceEEEc
Q 022929 110 RNMLVVDVGGGT-GF-TTLGIVKHVDAK-NVTILDQSPH----QLAKAKQKEP------------------LKECKIVEG 164 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~-~v~~vD~s~~----~~~~a~~~~~------------------~~~v~~~~~ 164 (290)
+..+|.=||+|. |. ++..+++. ++. +|+++|.+++ .++..++... ..++. ...
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~-~tt 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE-CTP 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE-EES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE-EeC
Confidence 457899999997 44 33444443 367 8999999998 7776654211 01122 222
Q ss_pred CCCCCCCCCCCccEEEecCccccc------CCH---HHHHHHHHhccCCCCEEEEEccCCC
Q 022929 165 DAEDLPFPTDYADRYVSAGSIEYW------PDP---QRGIREAYRVLKLGGKACIIGPVYP 216 (290)
Q Consensus 165 d~~~l~~~~~~~D~i~~~~~l~~~------~~~---~~~l~~~~~~L~pgG~l~i~~~~~~ 216 (290)
|... . ...|+|+..-.-..- +|. ....+.+...|++|..++..+...+
T Consensus 95 d~ea--~--~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 95 DFSR--I--SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp CGGG--G--GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred cHHH--H--hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 3211 1 237888864222111 232 4567788899999887766554433
No 477
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=64.62 E-value=17 Score=29.56 Aligned_cols=99 Identities=9% Similarity=-0.050 Sum_probs=58.0
Q ss_pred CCCEEEEEcCc-cchhH----HHHHhhCCCCeEEEEeCCHHHHH---HHhhhCCCCCceEEEcCCCCCC-----C-----
Q 022929 110 RNMLVVDVGGG-TGFTT----LGIVKHVDAKNVTILDQSPHQLA---KAKQKEPLKECKIVEGDAEDLP-----F----- 171 (290)
Q Consensus 110 ~~~~vLDiG~G-~G~~~----~~l~~~~~~~~v~~vD~s~~~~~---~a~~~~~~~~v~~~~~d~~~l~-----~----- 171 (290)
++++||=.|++ +|.++ ..+++. +.+|+.++.+....+ ...+.. .++.++..|+.+.. +
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEF--GSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 67899999975 23444 444444 789999988743332 222222 24788899987632 0
Q ss_pred CCCCccEEEecCccccc----------CCHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 172 PTDYADRYVSAGSIEYW----------PDPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 172 ~~~~~D~i~~~~~l~~~----------~~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
..++.|+++.+-..... .+.+ .+++.+...++++|.++...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 01358999876543321 1111 24555666777778777654
No 478
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=64.48 E-value=37 Score=28.67 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=53.4
Q ss_pred CEEEEEcCcc-chhHHHHHhhCCCCeEEE-EeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-GFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G~~~~~l~~~~~~~~v~~-vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||||. |..........++.++++ +|.+++..+...+.. ++. ..|..++ +.+...|+|+....-.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~---~~~--~~~~~~~-l~~~~~D~V~i~tp~~--- 74 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY---GCE--VRTIDAI-EAAADIDAVVICTPTD--- 74 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT---TCE--ECCHHHH-HHCTTCCEEEECSCGG---
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh---CCC--cCCHHHH-hcCCCCCEEEEeCCch---
Confidence 4688899986 443333334446778775 799998776665544 233 3444332 1223489988643211
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCc
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPT 217 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 217 (290)
...+.+...|+.|-.+++.-+....
T Consensus 75 ---~h~~~~~~al~~gk~v~~EKP~~~~ 99 (331)
T 4hkt_A 75 ---THADLIERFARAGKAIFCEKPIDLD 99 (331)
T ss_dssp ---GHHHHHHHHHHTTCEEEECSCSCSS
T ss_pred ---hHHHHHHHHHHcCCcEEEecCCCCC
Confidence 1233445566667777766554433
No 479
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=64.43 E-value=18 Score=29.75 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=48.0
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC---------CCCCCcc
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP---------FPTDYAD 177 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~---------~~~~~~D 177 (290)
.++++|=.|++.|. ++..+++. +.+|+.+|.+++.++.+.+.. ..++.++..|+.+.. ...+..|
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id 105 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGRLR 105 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 56788888877652 44455555 789999999988777665544 246788999987632 1113578
Q ss_pred EEEec
Q 022929 178 RYVSA 182 (290)
Q Consensus 178 ~i~~~ 182 (290)
+++.+
T Consensus 106 ~lv~~ 110 (281)
T 3ppi_A 106 YAVVA 110 (281)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 88866
No 480
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=63.09 E-value=26 Score=28.79 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC--CCCceEEEcCCCCCC----------CCCC
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECKIVEGDAEDLP----------FPTD 174 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~v~~~~~d~~~l~----------~~~~ 174 (290)
+++.+|=-|++.|. .+..+++. +.+|+.+|.+++.++...+... ..++.++..|+.+.. -.-+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57888888988774 45556665 8999999999987776654321 245778899997632 0014
Q ss_pred CccEEEecCc
Q 022929 175 YADRYVSAGS 184 (290)
Q Consensus 175 ~~D~i~~~~~ 184 (290)
+.|+++.+-.
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6899987644
No 481
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=63.06 E-value=12 Score=31.97 Aligned_cols=87 Identities=18% Similarity=0.110 Sum_probs=48.3
Q ss_pred ceEE-EcCCCCC--CCCCCCccEEEecCccc-----------ccCCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhh
Q 022929 159 CKIV-EGDAEDL--PFPTDYADRYVSAGSIE-----------YWPDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYF 224 (290)
Q Consensus 159 v~~~-~~d~~~l--~~~~~~~D~i~~~~~l~-----------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 224 (290)
..++ ++|..+. .++++++|+|++.--.. ++......+.++.++|+|||.+++........
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~------ 112 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQG------ 112 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCC------
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccc------
Confidence 3455 6776331 23456788888732111 11123467888899999999998864322110
Q ss_pred HHHhhcCCCHHHHHHHHHHCC-CcEEEEEEc
Q 022929 225 ADVWMLFPKEEEYIEWFQKAG-FKDVQLKRI 254 (290)
Q Consensus 225 ~~~~~~~~~~~~~~~ll~~aG-f~~v~~~~~ 254 (290)
. ........+...+...| |.......+
T Consensus 113 -~--~~~~~l~~l~~~i~~~G~~~~~~~IIW 140 (319)
T 1eg2_A 113 -E--AGSGDLISIISHMRQNSKMLLANLIIW 140 (319)
T ss_dssp -C--TTBCCHHHHHHHHHHHCCCEEEEEEEE
T ss_pred -c--cccccHHHHHHHHhCcccceeEEEEEE
Confidence 0 00012345556666677 877665444
No 482
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=62.81 E-value=23 Score=30.25 Aligned_cols=92 Identities=10% Similarity=0.038 Sum_probs=54.2
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCC----CCce------EEEcCCCCCCCCCCCccEE
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECK------IVEGDAEDLPFPTDYADRY 179 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~v~------~~~~d~~~l~~~~~~~D~i 179 (290)
.+|.=||+|. |. ++..+++. +.+|+++|.+++.++..++.... .... ....|..+. . ..+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA-V--KDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH-H--TTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH-H--hcCCEE
Confidence 5799999986 43 44444444 67899999999887777654210 0000 011111110 1 248988
Q ss_pred EecCcccccCCHHHHHHHHHhccCCCCEEEEE
Q 022929 180 VSAGSIEYWPDPQRGIREAYRVLKLGGKACII 211 (290)
Q Consensus 180 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 211 (290)
+..---.. ...+++.+...++++..++..
T Consensus 80 i~~v~~~~---~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAIH---HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGGG---HHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCchH---HHHHHHHHHHhCCCCCEEEEc
Confidence 86533222 256788888889887765544
No 483
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=62.56 E-value=36 Score=30.79 Aligned_cols=121 Identities=14% Similarity=0.070 Sum_probs=66.7
Q ss_pred CCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 111 NMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 111 ~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
..+|.=||+|. | .++..+++. +.+|++.|.+++.++...+.....++.. ..|..+.--.-+..|+|+..--- -
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~~~gi~~-~~s~~e~v~~l~~aDvVil~Vp~--~ 89 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENPGKKLVP-YYTVKEFVESLETPRRILLMVKA--G 89 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHSTTSCEEE-CSSHHHHHHTBCSSCEEEECSCS--S
T ss_pred CCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCCCCCeEE-eCCHHHHHhCCCCCCEEEEECCC--H
Confidence 45688899986 4 345555555 6789999999988877665432112221 12221110000127888864211 1
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEE
Q 022929 189 PDPQRGIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQL 251 (290)
Q Consensus 189 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 251 (290)
...+.+++++...|+||..++-.....+. +...+.+.+++.|...+..
T Consensus 90 ~~v~~vl~~l~~~l~~g~iIId~s~g~~~---------------~t~~l~~~l~~~g~~~v~~ 137 (480)
T 2zyd_A 90 AGTDAAIDSLKPYLDKGDIIIDGGNTFFQ---------------DTIRRNRELSAEGFNFIGT 137 (480)
T ss_dssp SHHHHHHHHHGGGCCTTCEEEECSCCCHH---------------HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCCCHH---------------HHHHHHHHHHHCCCCeeCC
Confidence 12357888888889887755433322211 1234556666667765544
No 484
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=62.28 E-value=41 Score=28.63 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=53.5
Q ss_pred CEEEEEcCcc-chhHHHHHhhCCCCeEEE-EeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-GFTTLGIVKHVDAKNVTI-LDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G~~~~~l~~~~~~~~v~~-vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||||. |..........++.++++ +|.+++..+.+.+... +.....|..++ +.+...|+|+...--.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~---~~~~~~~~~~l-l~~~~~D~V~i~tp~~--- 75 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG---VEKAYKDPHEL-IEDPNVDAVLVCSSTN--- 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT---CSEEESSHHHH-HHCTTCCEEEECSCGG---
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC---CCceeCCHHHH-hcCCCCCEEEEcCCCc---
Confidence 3688899985 433333333356778875 6999887666554432 22233444332 1223489988643221
Q ss_pred CHHHHHHHHHhccCCCCEEEEEccCCCc
Q 022929 190 DPQRGIREAYRVLKLGGKACIIGPVYPT 217 (290)
Q Consensus 190 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 217 (290)
.....+...|+.|-.+++.-+....
T Consensus 76 ---~h~~~~~~al~~gk~v~~EKP~~~~ 100 (344)
T 3ezy_A 76 ---THSELVIACAKAKKHVFCEKPLSLN 100 (344)
T ss_dssp ---GHHHHHHHHHHTTCEEEEESCSCSC
T ss_pred ---chHHHHHHHHhcCCeEEEECCCCCC
Confidence 1233445567777777776665443
No 485
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=62.07 E-value=24 Score=29.66 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=63.6
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|-=||.|. | .++..|++. +.+|++.|.+++..+...+. +... ..+..+. -...|+|++. ++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~----G~~~-~~s~~e~---~~~~dvvi~~-----l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKL----GATV-VENAIDA---ITPGGIVFSV-----LA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTT----TCEE-CSSGGGG---CCTTCEEEEC-----CS
T ss_pred CcEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHc----CCeE-eCCHHHH---HhcCCceeee-----cc
Confidence 3677888886 3 455666666 78999999988766544322 2222 2222221 1236888763 34
Q ss_pred CHHH----HHHHHHhccCCCCEEEEEccCCCchhHhhhhHHHhhcCCCHHHHHHHHHHCCCcEEEEEEcC
Q 022929 190 DPQR----GIREAYRVLKLGGKACIIGPVYPTFWLSRYFADVWMLFPKEEEYIEWFQKAGFKDVQLKRIG 255 (290)
Q Consensus 190 ~~~~----~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 255 (290)
++.. +...+...+++|+.++-.+...+. +..++.+.+++.|...++.-..+
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~---------------~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPE---------------TSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHH---------------HHHHHHHHHHHTTCEEEECCEEC
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChH---------------HHHHHHHHHHhcCCceecCCcCC
Confidence 4332 234577788888876655444332 34667788888998877765554
No 486
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=62.03 E-value=63 Score=26.27 Aligned_cols=73 Identities=11% Similarity=0.062 Sum_probs=44.8
Q ss_pred CCCEEEEEcCccchhHH----HHHhhCCCCeEEEEeCCHHHHHHHhhhC----CCCCceEEEcCCCCCC-----CC----
Q 022929 110 RNMLVVDVGGGTGFTTL----GIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECKIVEGDAEDLP-----FP---- 172 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~----~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~v~~~~~d~~~l~-----~~---- 172 (290)
+++++|=.|++. .++. .+++. +.+|++++.+++.++...+.. ...++.++..|+.+.. +.
T Consensus 31 ~~k~vlVTGasg-gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGASG-GIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 467888888654 4444 34444 789999999887655443221 1134678888987632 00
Q ss_pred -CCCccEEEecCcc
Q 022929 173 -TDYADRYVSAGSI 185 (290)
Q Consensus 173 -~~~~D~i~~~~~l 185 (290)
.+.+|+++.+-..
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 1258998876543
No 487
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=61.78 E-value=28 Score=28.76 Aligned_cols=73 Identities=19% Similarity=0.222 Sum_probs=49.5
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----C-CCCCccEEE
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----F-PTDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~-~~~~~D~i~ 180 (290)
+++++|=.|++.|. ++..+++. +.+|++++.+++..+.+.+.. ..++.++..|+.+.. + .-++.|+++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 56888888876542 33444444 789999999998877776554 246888999987632 0 013589988
Q ss_pred ecCcc
Q 022929 181 SAGSI 185 (290)
Q Consensus 181 ~~~~l 185 (290)
.+-..
T Consensus 92 ~nAg~ 96 (291)
T 3rd5_A 92 NNAGI 96 (291)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 76443
No 488
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=61.73 E-value=24 Score=29.44 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=59.7
Q ss_pred CCCEEEEEcCcc--ch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhC-CCCCceEEEcCCCCCC-----CC-----C
Q 022929 110 RNMLVVDVGGGT--GF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECKIVEGDAEDLP-----FP-----T 173 (290)
Q Consensus 110 ~~~~vLDiG~G~--G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~v~~~~~d~~~l~-----~~-----~ 173 (290)
.++++|=.|++. |. ++..+++. +.+|+.+|.+++..+.+.+.. ...++.++..|+.+.. +. -
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 568899998754 32 44555555 789999999864333322211 0124678889987632 00 1
Q ss_pred CCccEEEecCccccc---------CCHH--------------HHHHHHHhccCCCCEEEEEc
Q 022929 174 DYADRYVSAGSIEYW---------PDPQ--------------RGIREAYRVLKLGGKACIIG 212 (290)
Q Consensus 174 ~~~D~i~~~~~l~~~---------~~~~--------------~~l~~~~~~L~pgG~l~i~~ 212 (290)
++.|+++.+-..... .+.+ .+++.+...++.+|.++...
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 358999876544321 1111 34556667777788887764
No 489
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=61.71 E-value=4.9 Score=33.93 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=27.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCCC----CeEEEEeC
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVDA----KNVTILDQ 142 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~~----~~v~~vD~ 142 (290)
.+..|+=+|||.|.....+++.+|. .+.+.+|+
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 4579999999999999999887653 57788887
No 490
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=61.43 E-value=18 Score=30.09 Aligned_cols=85 Identities=16% Similarity=0.195 Sum_probs=50.1
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcccccC
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWP 189 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~~ 189 (290)
.+|.=||+|. |. ++..+++. +.+|+++|.+++..+...+. ++.. ..|..+. . ...|+|+..- +
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~----g~~~-~~~~~~~-~--~~~D~vi~~v-----~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA----GAET-ASTAKAI-A--EQCDVIITML-----P 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----TCEE-CSSHHHH-H--HHCSEEEECC-----S
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC----CCee-cCCHHHH-H--hCCCEEEEEC-----C
Confidence 4789999986 43 34444444 57899999999887776643 2221 1121110 1 1378888642 3
Q ss_pred CH---HHHH---HHHHhccCCCCEEEEE
Q 022929 190 DP---QRGI---REAYRVLKLGGKACII 211 (290)
Q Consensus 190 ~~---~~~l---~~~~~~L~pgG~l~i~ 211 (290)
++ +.++ +.+...+++|..++-.
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~ 98 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDM 98 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEEC
Confidence 22 3354 4566778888766433
No 491
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=61.36 E-value=7.9 Score=37.68 Aligned_cols=90 Identities=11% Similarity=0.139 Sum_probs=56.6
Q ss_pred CCCCEEEEEcC-c-cchhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC--------CCCCCccE
Q 022929 109 NRNMLVVDVGG-G-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP--------FPTDYADR 178 (290)
Q Consensus 109 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~--------~~~~~~D~ 178 (290)
+++.+||=.|+ | .|..+..+++.. +.+|++++.++ -.+..+ .... .++ |..+.. .....+|+
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~-Ga~V~~t~~~~-k~~~l~--lga~--~v~--~~~~~~~~~~i~~~t~g~GvDv 415 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHL-GAEVYATASED-KWQAVE--LSRE--HLA--SSRTCDFEQQFLGATGGRGVDV 415 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHT-TCCEEEECCGG-GGGGSC--SCGG--GEE--CSSSSTHHHHHHHHSCSSCCSE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeChH-Hhhhhh--cChh--hee--ecCChhHHHHHHHHcCCCCeEE
Confidence 48899999994 4 689999999987 67899998644 111111 1111 112 111111 12345999
Q ss_pred EEecCcccccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 179 YVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 179 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
|+-...- ..++...++|+|+|+++....
T Consensus 416 Vld~~gg-------~~~~~~l~~l~~~Gr~v~iG~ 443 (795)
T 3slk_A 416 VLNSLAG-------EFADASLRMLPRGGRFLELGK 443 (795)
T ss_dssp EEECCCT-------TTTHHHHTSCTTCEEEEECCS
T ss_pred EEECCCc-------HHHHHHHHHhcCCCEEEEecc
Confidence 9964321 245788899999999988753
No 492
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=61.30 E-value=16 Score=30.32 Aligned_cols=88 Identities=17% Similarity=0.094 Sum_probs=52.7
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhC-CCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCccccc
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYW 188 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l~~~ 188 (290)
.+|.=||||. | .++..+++.. +..+|+.+|.+++.++.+.+.. ++... .|..+. . ...|+|+..---
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~---gi~~~-~~~~~~-~--~~aDvVilav~p--- 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC---GVHTT-QDNRQG-A--LNADVVVLAVKP--- 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT---CCEEE-SCHHHH-H--SSCSEEEECSCG---
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc---CCEEe-CChHHH-H--hcCCeEEEEeCH---
Confidence 5688899986 3 3555555541 1238999999998888777543 23322 221110 1 237988865421
Q ss_pred CCHHHHHHHHHhc-cCCCCEEE
Q 022929 189 PDPQRGIREAYRV-LKLGGKAC 209 (290)
Q Consensus 189 ~~~~~~l~~~~~~-L~pgG~l~ 209 (290)
.....+++++... ++++-.++
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHhhccCCCeEEE
Confidence 2345788888887 77654544
No 493
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=61.19 E-value=11 Score=33.35 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=30.0
Q ss_pred CCCEEEEEcCcc-chhHHHHHhhCCCCeEEEEeCCHHHH-HHHhh
Q 022929 110 RNMLVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQL-AKAKQ 152 (290)
Q Consensus 110 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~ 152 (290)
++++|+=+|+|. |......+...+..+|+++|.+++-. +.+++
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~ 210 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD 210 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 689999999985 55555555544334999999998765 44543
No 494
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=60.84 E-value=29 Score=30.25 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=51.5
Q ss_pred CCCEEEEEcCccchhHHHHHhhCC-CCeEEEE-eCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEec--Ccc
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHVD-AKNVTIL-DQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSA--GSI 185 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~v-D~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~--~~l 185 (290)
+..+|.=||+|.|..-.......+ +.+++|+ |.+++..+...+.. ++.. ..|++++. ++ .|+++.. +.+
T Consensus 6 ~~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~---gv~~-~~~~~~l~--~~-~D~v~i~~p~~~ 78 (372)
T 4gmf_A 6 PKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF---GIPL-YTSPEQIT--GM-PDIACIVVRSTV 78 (372)
T ss_dssp -CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT---TCCE-ESSGGGCC--SC-CSEEEECCC--C
T ss_pred CCCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh---CCCE-ECCHHHHh--cC-CCEEEEECCCcc
Confidence 457899999998876544444444 4677764 88776555544443 3333 45666653 22 7877642 222
Q ss_pred cccCCHHHHHHHHHhccCCCCEEEEEcc
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKACIIGP 213 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 213 (290)
| .. .-.+-+...|+.|=.+++.-|
T Consensus 79 h-~~---~~~~~a~~al~aGkhVl~EKP 102 (372)
T 4gmf_A 79 A-GG---AGTQLARHFLARGVHVIQEHP 102 (372)
T ss_dssp T-TS---HHHHHHHHHHHTTCEEEEESC
T ss_pred c-ch---hHHHHHHHHHHcCCcEEEecC
Confidence 2 11 122334555566666666555
No 495
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=60.79 E-value=4.3 Score=33.09 Aligned_cols=86 Identities=16% Similarity=0.097 Sum_probs=47.9
Q ss_pred CEEEEEcCcc-c-hhHHHHHhhCCCC----eEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCCCCCCCccEEEecCcc
Q 022929 112 MLVVDVGGGT-G-FTTLGIVKHVDAK----NVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSI 185 (290)
Q Consensus 112 ~~vLDiG~G~-G-~~~~~l~~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~~~~~~~D~i~~~~~l 185 (290)
.+|.=||||. | .++..+++. +. +|++.|.+++.++.+.+.. ++.. ..|..+. . ...|+|+..-
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~---g~~~-~~~~~e~-~--~~aDvVilav-- 71 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEKY---GLTT-TTDNNEV-A--KNADILILSI-- 71 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHHH---CCEE-CSCHHHH-H--HHCSEEEECS--
T ss_pred CeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHHh---CCEE-eCChHHH-H--HhCCEEEEEe--
Confidence 4688899986 4 355555554 44 8999999998887775432 1221 1111110 1 1368887643
Q ss_pred cccCCHHHHHHHHHhccCCCCEEE
Q 022929 186 EYWPDPQRGIREAYRVLKLGGKAC 209 (290)
Q Consensus 186 ~~~~~~~~~l~~~~~~L~pgG~l~ 209 (290)
.......+++++...++++..++
T Consensus 72 -~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 72 -KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp -CTTTHHHHC---CCSSCTTCEEE
T ss_pred -CHHHHHHHHHHHHhhcCCCCEEE
Confidence 22334567777777777766554
No 496
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=60.56 E-value=37 Score=27.63 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=48.1
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CC-----CCCc
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FP-----TDYA 176 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~-----~~~~ 176 (290)
.++++|=.|++.|. ++..+++. +.+|+.++.+++.++...+... .++.++..|+.+.. +. -++.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46788888876542 33444444 7899999999887776655443 46778889987632 00 1358
Q ss_pred cEEEecCcc
Q 022929 177 DRYVSAGSI 185 (290)
Q Consensus 177 D~i~~~~~l 185 (290)
|+++.+-..
T Consensus 82 D~lvnnAg~ 90 (263)
T 2a4k_A 82 HGVAHFAGV 90 (263)
T ss_dssp CEEEEGGGG
T ss_pred cEEEECCCC
Confidence 999876543
No 497
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=60.55 E-value=54 Score=29.43 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=29.7
Q ss_pred CEEEEEcCcc-ch-hHHHHHhhCCCCeEEEEeCCHHHHHHHhh
Q 022929 112 MLVVDVGGGT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQ 152 (290)
Q Consensus 112 ~~vLDiG~G~-G~-~~~~l~~~~~~~~v~~vD~s~~~~~~a~~ 152 (290)
.+|.=||+|. |. ++..+++..++.+|+++|.+++.++..++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~ 48 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNS 48 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhC
Confidence 5788999986 43 45555555335789999999988877643
No 498
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=60.50 E-value=24 Score=29.14 Aligned_cols=74 Identities=15% Similarity=0.124 Sum_probs=49.7
Q ss_pred CCCEEEEEcCccch---hHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCCCCCceEEEcCCCCCC-----CC-----CCCc
Q 022929 110 RNMLVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLP-----FP-----TDYA 176 (290)
Q Consensus 110 ~~~~vLDiG~G~G~---~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~v~~~~~d~~~l~-----~~-----~~~~ 176 (290)
.++++|=.|++.|. ++..+++. +.+|+.+|.+++..+.+.+.. ..++.++..|+.+.. +. -++.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 56788888876653 44455555 789999999988776665443 246788899987632 00 1358
Q ss_pred cEEEecCccc
Q 022929 177 DRYVSAGSIE 186 (290)
Q Consensus 177 D~i~~~~~l~ 186 (290)
|+++.+-...
T Consensus 105 D~lvnnAg~~ 114 (277)
T 3gvc_A 105 DKLVANAGVV 114 (277)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9998765443
No 499
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=60.08 E-value=27 Score=29.23 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=45.2
Q ss_pred CCCEEEEEcCccchhHHHHHhhC--CCCeEEEEeCCHHHHHHHhhhC---CCCCceEE-EcCCCCCC-CC--CCCccEEE
Q 022929 110 RNMLVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKE---PLKECKIV-EGDAEDLP-FP--TDYADRYV 180 (290)
Q Consensus 110 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~---~~~~v~~~-~~d~~~l~-~~--~~~~D~i~ 180 (290)
++++||=.|+ +|.++..+++.+ .+.+|++++.++...+...+.. ...+++++ .+|+.+.. +. -..+|+|+
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 5678988875 455555554332 2679999999876554433221 11467777 78886532 11 12589998
Q ss_pred ecCcc
Q 022929 181 SAGSI 185 (290)
Q Consensus 181 ~~~~l 185 (290)
.....
T Consensus 89 h~A~~ 93 (342)
T 1y1p_A 89 HIASV 93 (342)
T ss_dssp ECCCC
T ss_pred EeCCC
Confidence 75443
No 500
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=60.02 E-value=13 Score=31.81 Aligned_cols=98 Identities=11% Similarity=-0.021 Sum_probs=60.6
Q ss_pred CCCEEEEEcCcc-c-hhHHHHHhhCCCCeEEEEeCCHHHHHHHhhhCC------------CC---------CceEEEcCC
Q 022929 110 RNMLVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------------LK---------ECKIVEGDA 166 (290)
Q Consensus 110 ~~~~vLDiG~G~-G-~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~---------~v~~~~~d~ 166 (290)
...+|.-||+|+ | .++..++.. +..|+..|++++.++.+.++.. .. ++. ...|+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~-~~~~l 81 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS-SCTNL 81 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE-EECCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcc-cccch
Confidence 346899999996 4 355555665 8899999999998877754311 00 111 11222
Q ss_pred CCCCCCCCCccEEEecCcccccCCHHHHHHHHHhccCCCCEEEEEccC
Q 022929 167 EDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACIIGPV 214 (290)
Q Consensus 167 ~~l~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 214 (290)
.+ .+ ...|+|+ -.+.+.+.-.+++++++..+++|+..|.-.+..
T Consensus 82 ~~-a~--~~ad~Vi-Eav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 82 AE-AV--EGVVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HH-HT--TTEEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred Hh-Hh--ccCcEEe-eccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 11 01 2267665 334444444568999999999999887665443
Done!