BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022930
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 179/297 (60%), Positives = 209/297 (70%), Gaps = 47/297 (15%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG RV
Sbjct: 61 FVRYKYADEAQKAVERLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E +S+ RSRSRSPR RYRD+++D+DYR+RSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIEPVPRSRNRSRSRSPRRRYRDDYKDRDYRKRSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESASPPRHS 240
+S +R++RD+YR +ERD+RR+SRSRSASPD + GRG+YD+ERRS SRS SASP R S
Sbjct: 142 KSLDRHERDKYRGRERDYRRQSRSRSASPDYSRGRGRGRYDDERRSSSRSMGSASPARRS 201
Query: 241 PNS-------KRSPSPRKTHKGEINPDERSPALKRVSPDGRRSVSRSLSPRRSPANE 290
P+ K SP P+ + D RSP + SP GR SRS SPR S +E
Sbjct: 202 PSPRRSRSPLKNSP-PKGASPDRRSRDGRSPTPRSASPHGRAPASRSPSPRNSDVDE 257
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 197/303 (65%), Positives = 217/303 (71%), Gaps = 59/303 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV++LDG R
Sbjct: 61 FVRYKYADEAQKAVEKLDG---------------------------------------RN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREI VQFAKYGPNAE+I +GRI+E+SSKSKGRSRSRSPRPR+RDE+RD+DYR+RSRS
Sbjct: 82 VDGREIMVQFAKYGPNAERIHKGRIIETSSKSKGRSRSRSPRPRHRDEYRDRDYRKRSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESASPPRHS 240
RSR R DRDRYR KERD RRRSRSRSASPD HK+ GRG+YD+ERRSRSRSY SASP R S
Sbjct: 142 RSRGRNDRDRYRGKERDSRRRSRSRSASPDHHKDRGRGRYDDERRSRSRSYGSASPARRS 201
Query: 241 -------------PNSKRSPSPRKTHKGEINPDERSPALKRVSPDGRRSVSRSLSPRRSP 287
P+ + SP RK + ERSP K VSP GR + SRS SP S
Sbjct: 202 PSPRGSPSPRRTPPSREESPVGRKRN-------ERSPTPKSVSPRGRPADSRSPSPHNSD 254
Query: 288 ANE 290
A+E
Sbjct: 255 ADE 257
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 203/307 (66%), Gaps = 77/307 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI+DTYSLLVLN+TFRTTADDLFPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAV++LDG RV
Sbjct: 61 FVRYKYQDEAQKAVEKLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKD----YRR 176
VDGREI V+FAKYGPNAE+I +GRI+E ++KGRSRSRSPRPR+RD HRDKD R
Sbjct: 82 VDGREIMVRFAKYGPNAERIDKGRILEPVQRTKGRSRSRSPRPRHRD-HRDKDSRRRSRS 140
Query: 177 RSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESA-- 234
RSRSRS+ RYDRD+YR ++RD+R RSRSR SPD HK GRGKYDE+RRSRSRS+ +
Sbjct: 141 RSRSRSKGRYDRDQYRGRDRDNRHRSRSR--SPDYHKGRGRGKYDEDRRSRSRSHGRSAS 198
Query: 235 -----------------SPPRHSPNSKRSPSPRKTHKGEINPDERSPALKRVSPDGRRSV 277
+PPR + SP R HK +RSP K +SP GRR+
Sbjct: 199 PARRSPSPRRSPSPRRITPPRDA-----SPDGR-NHK------DRSPTPKSISPRGRRAG 246
Query: 278 SRSLSPR 284
SRS PR
Sbjct: 247 SRSPLPR 253
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/308 (54%), Positives = 205/308 (66%), Gaps = 59/308 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG R+
Sbjct: 61 FVRYKYADEAQKAVERLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E+S +S+ R R+RD+++D+DYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRSP-RKRHRDDYKDRDYRRRSRS 140
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE--------------RRS 226
RS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+YD+E
Sbjct: 141 RSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGRYDDERNSRSRSRSVDSGSPAR 199
Query: 227 RSRSYESASPPRHSPNSKRSPSPRKTHKGEINP----DERSPALKRVSPDGRRSVSRSLS 282
RS S + P+ S + +RSPSPRK+ +GE D RSP + VSP GR SRS S
Sbjct: 200 RSPSPRRSPSPQRSTSPQRSPSPRKSPRGESPANRSRDGRSPTPRSVSPRGRPDASRSPS 259
Query: 283 PRRSPANE 290
PR S +E
Sbjct: 260 PRNSNGDE 267
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/235 (65%), Positives = 174/235 (74%), Gaps = 46/235 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYA+EAQKAVDRLDG RV
Sbjct: 61 FVRYKYAEEAQKAVDRLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD----EHRDKDYRR 176
VDGREI VQFAKYGPNAE+I+ GRIVESSSK KGRSRSRSPRPRYRD + +D+DYRR
Sbjct: 82 VDGREIMVQFAKYGPNAERIRSGRIVESSSKIKGRSRSRSPRPRYRDGYRDKDKDRDYRR 141
Query: 177 RSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSY 231
RSRSRS++RYDRD YR ++RD+ RS S SPD K +GRG +DE+R RS+S+
Sbjct: 142 RSRSRSKDRYDRDGYRGRDRDY--HPRSVSHSPDHRKEYGRG-HDEKRHRRSQSH 193
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/308 (54%), Positives = 205/308 (66%), Gaps = 59/308 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG R+
Sbjct: 61 FVRYKYADEAQKAVERLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E+S +S+ R R+RD++RD+DYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRSP-RKRHRDDYRDRDYRRRSRS 140
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE--------------RRS 226
RS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+YD+E
Sbjct: 141 RSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGRYDDERNSRSRSRSVDSRSPAR 199
Query: 227 RSRSYESASPPRHSPNSKRSPSPRKTHKGEINP----DERSPALKRVSPDGRRSVSRSLS 282
RS S + P+ S + +RS SPRK+ +GE +ERSP + VSP GR SRS S
Sbjct: 200 RSPSPRRSPSPQRSTSPQRSTSPRKSPRGESPANRSREERSPTPRSVSPRGRPDASRSPS 259
Query: 283 PRRSPANE 290
PR S +E
Sbjct: 260 PRNSNGDE 267
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 161/219 (73%), Gaps = 43/219 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAVDRLD GRV
Sbjct: 61 FVRYKYADEAQKAVDRLD---------------------------------------GRV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD--EHRDKDYRRRS 178
VDGREI VQFAKYGPNAE+I+ GRIVES+SK K RSRSRSPRP+Y D RD+DYRRRS
Sbjct: 82 VDGREIMVQFAKYGPNAERIRDGRIVESTSKIKSRSRSRSPRPKYWDGYRDRDRDYRRRS 141
Query: 179 RSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGR 217
RSRSR+R ++D YR +++D+ R RS S SPDR K+ GR
Sbjct: 142 RSRSRDRSEQDGYRGRDKDYHR--RSVSCSPDRRKDRGR 178
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 187/307 (60%), Gaps = 61/307 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
F RYKYADEAQKAV+RLDG KN
Sbjct: 61 FFRYKYADEAQKAVERLDG-------------------KN-------------------- 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK-GRSRSRSPRPRYRD--EHRDKDYRRR 177
VDGR I VQFAKYGPNAE+IQ+GRI SS K K GRSRSRSP PR+R+ ++RD++Y R
Sbjct: 82 VDGRYIMVQFAKYGPNAERIQRGRITTSSPKPKAGRSRSRSPPPRHRNSSDNRDREYGR- 140
Query: 178 SRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNH---------------GRGKYDE 222
R R+RY+RD YR K+RD+ RRS S+S SP R ++
Sbjct: 141 -RGSVRDRYERDEYRDKDRDYHRRSPSQSPSPRRERSRTRSPRRVRSRSTSILSDEPRRR 199
Query: 223 ERRSRSRSYESASPPRHSPNSKRSPSPRKTHKGEINPDERSPALKRVSPDGR-RSVSRSL 281
R S A P R + +RS SPR + +P RSP +SP+G+ RS SRS
Sbjct: 200 SRSRSLESRSPARPARRNQTPRRSLSPRPRSPAQ-SPAARSPDRANMSPNGKHRSDSRSA 258
Query: 282 SPRRSPA 288
SP S A
Sbjct: 259 SPLNSDA 265
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 180/275 (65%), Gaps = 61/275 (22%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDL PLFEKYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVDRLDG RV
Sbjct: 61 FVRYKYEDEAQKAVDRLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREI VQFAKYGPNAE+I +G+I+E+ +S+GRSRSRSPR YRD++R++DYR+ SRS
Sbjct: 82 VDGREIMVQFAKYGPNAERIHKGKIMETVPRSRGRSRSRSPRRGYRDDYRERDYRKWSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYE-------- 232
R R R R +ERD+RRRSRSRS +PD ++ GR RRS SRSY
Sbjct: 142 RDRYG----RDRYRERDYRRRSRSRSYTPDDYRRRGRDSVSPARRSLSRSYSPDDYRKRG 197
Query: 233 --SASPPRHSPNSKRSPSPRKTHKGEINPDERSPA 265
S SP SP++KRSPS ++P RSP+
Sbjct: 198 KHSQSPVCKSPSAKRSPS--------MSPARRSPS 224
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 196/302 (64%), Gaps = 71/302 (23%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEA KAV+RLDG RV
Sbjct: 61 FVRYKYKDEAHKAVERLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE-----------------------SSSKSKGRSR 157
VDGREITVQFAKYGPNAEKI +GR+VE S + + R
Sbjct: 82 VDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRR 141
Query: 158 SRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGR 217
SRSPR R RD++R+KDYR+RSRSRS ER R+R++ K+RDHRRR+RSRSASPD K R
Sbjct: 142 SRSPRRRSRDDYREKDYRKRSRSRSYER--RERHQEKDRDHRRRTRSRSASPD-DKRRVR 198
Query: 218 GKYDEERRSRSRSYESASPPRHSPNSKRSPSPRKTHKG-EINPDERSPALKRVSPDGRRS 276
G+YD+E RS SRS SASP RH S RS SP+KT E++PD+RS SP RRS
Sbjct: 199 GRYDDESRSHSRSL-SASPARHG-LSPRSSSPQKTSPPREVSPDKRS---NERSPSPRRS 253
Query: 277 VS 278
+S
Sbjct: 254 LS 255
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/268 (50%), Positives = 164/268 (61%), Gaps = 73/268 (27%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVD+LD GR
Sbjct: 61 FVRYKYEDEAQKAVDKLD---------------------------------------GRT 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPR---------YRDEHRD 171
VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS SP+ R YRD++RD
Sbjct: 82 VDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSPSPKRRYRADYRDRGYRDDYRD 141
Query: 172 KDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD-RHKNHGRGKYDEER 224
+ Y R RSRS ERY+R+RY +E+ +RRRSRS S D RH+ +G
Sbjct: 142 RHYRDDYQDREYRRSRSIERYERERY--QEKGYRRRSRSISPDYDRRHRKNG-------- 191
Query: 225 RSRSRSYE-SASPPR----HSPNSKRSP 247
+SRSY +ASP R HSP S RSP
Sbjct: 192 --QSRSYSLTASPSRPRDEHSPRS-RSP 216
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 171/320 (53%), Positives = 205/320 (64%), Gaps = 70/320 (21%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLDG R+
Sbjct: 61 FVRYKYADEASKAVDRLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+IQ+GRI+E+S +SK + R+RD++++KDYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRSPSKRRHRDDYKEKDYRRRSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE--RRSRSRSYESASPPR 238
RS +R++RDR+R ++RDHRRRSRSRSASP +K GRG++D+E RS SRS +S SP R
Sbjct: 142 RSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRGRHDDERRSRSPSRSVDSRSPVR 200
Query: 239 HSP------------------NSKRSPSPRKTHKGEINPDERSP----------ALKRVS 270
S + KRS SP+K+ +P SP + VS
Sbjct: 201 RSSIPKRSPSPKRSPSPKRSPSLKRSISPQKSVSPRKSPLRESPDNRSRGGRSLTPRSVS 260
Query: 271 PDGRRSVSRSLSPRRSPANE 290
P GR SRS SPR S +E
Sbjct: 261 PRGRPGASRSPSPRNSNGDE 280
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 194/311 (62%), Gaps = 65/311 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTAD LFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLDG R+
Sbjct: 61 FVRYKYADEASKAVDRLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E+S +SK R R+ D++RDK YRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIETSPRSKSSRSRSPSRRRHHDDYRDKGYRRRSRS 141
Query: 181 RSRERYD-RDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESASP--- 236
RS +RY+ ++RD+RRRSRSRSASPD +K GRG+YD+ERRSRSRS S
Sbjct: 142 RSYDRYERDRYRGGRDRDYRRRSRSRSASPD-YKRRGRGRYDDERRSRSRSRSVDSRSPA 200
Query: 237 -----------------PRHSPNSKRSPSPRKTHKGEINPDERSPALKRVSPDGRRSVSR 279
P+ SP SPSPR+ + D R P + VSP GR S+
Sbjct: 201 RRSPSPKRSPSPKKSIFPKKSP----SPSPRRESPDTRSRDGRFPTSRSVSPRGRPEASQ 256
Query: 280 SLSPRRSPANE 290
S SPR S +E
Sbjct: 257 SPSPRNSDGDE 267
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 156/246 (63%), Gaps = 59/246 (23%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVD+LD GR
Sbjct: 61 FVRYKYEDEAQKAVDKLD---------------------------------------GRT 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPR---------YRDEHRD 171
VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS SP+ R YRD++RD
Sbjct: 82 VDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSPSPKRRYRADYRDRGYRDDYRD 141
Query: 172 KDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD-RHKNHGRGKYDEER 224
+ Y R RSRS ERY+R+RY +E+ +RRRSRS S D RH+ +GR + +ER
Sbjct: 142 RHYRDDYQDREYRRSRSIERYERERY--QEKGYRRRSRSISPDYDRRHRKNGRPR--DER 197
Query: 225 RSRSRS 230
RSRS
Sbjct: 198 SPRSRS 203
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 131/180 (72%), Gaps = 39/180 (21%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDL PLFEKYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVDRLDG RV
Sbjct: 61 FVRYKYEDEAQKAVDRLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREI VQFAKYGPNAE+I +G+I+E+ +S+GRSRSRSPR YRD++R++DYR+RSRS
Sbjct: 82 VDGREIMVQFAKYGPNAERIHKGKIMETVPRSRGRSRSRSPRRGYRDDYRERDYRKRSRS 141
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/245 (51%), Positives = 153/245 (62%), Gaps = 58/245 (23%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVD+LD GR
Sbjct: 61 FVRYKYEDEAQKAVDKLD---------------------------------------GRT 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPR---------YRDEHRD 171
VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS SP+ R YRD++RD
Sbjct: 82 VDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSPSPKRRYRADYRDRGYRDDYRD 141
Query: 172 KDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERR 225
+ Y R RSRS ERY+R+RY +E+ +RR RSRS SPD + H + +ER
Sbjct: 142 RHYRDDYQDREYRRSRSIERYERERY--QEKGYRR--RSRSISPDYDRRHRKNGPRDERS 197
Query: 226 SRSRS 230
RSRS
Sbjct: 198 PRSRS 202
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/223 (62%), Positives = 166/223 (74%), Gaps = 40/223 (17%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLDG R+
Sbjct: 61 FVRYKYADEASKAVDRLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+IQ+GRI+E+S +SK + R+RD++++KDYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRSPSKRRHRDDYKEKDYRRRSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE 223
RS +R++RDR+R ++RDHRRRSRSRSASP +K GRG++D+E
Sbjct: 142 RSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRGRHDDE 183
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 196/292 (67%), Gaps = 60/292 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG R+
Sbjct: 61 FVRYKYADEAQKAVERLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E+S +S+ R R+RD++RD+DYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRSP-RKRHRDDYRDRDYRRRSRS 140
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE--------------RRS 226
RS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+YD+E
Sbjct: 141 RSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGRYDDERNSRSRSRSVDSRSPAR 199
Query: 227 RSRSYESASPPRHSPNSKRSPSPRKTHKGEINPDERS----PALKRVSPDGR 274
RS S + P+ S + +RS SPRK+ +GE +P RS P + VSP GR
Sbjct: 200 RSPSPRRSPSPQRSTSPQRSTSPRKSPRGE-SPANRSREDVPTPRSVSPRGR 250
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 172/297 (57%), Positives = 207/297 (69%), Gaps = 49/297 (16%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI+DT+SLLVLNITFRTTADDLFP F+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAVDRLDG R+
Sbjct: 61 FVRYKYADEAQKAVDRLDG---------------------------------------RI 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRIVE+ KS+GRSRS SPR RYRD++RD+DYRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIVETFPKSRGRSRSHSPRRRYRDDNRDRDYRRRSRS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESASPPRHS 240
RS +RY+ DRYR +ERD+RRRSRS SASPD + RS RS +S SP R++
Sbjct: 142 RSYDRYESDRYRGRERDYRRRSRSHSASPDYRRGRYDDGRRNLSRS--RSIDSVSPTRYT 199
Query: 241 PNSKR------SPS-PRKTHKGEINPDERSPALKRVSPDGRRSVSRSLSPRRSPANE 290
P+ KR +PS PR + ++ +ERSP+ + +SP GR + SRS S +S A++
Sbjct: 200 PSPKRNFPPRVTPSPPRGGSQDRLSGEERSPS-RSISPRGRPAGSRSPSLHKSDADD 255
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea mays]
Length = 284
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 113/152 (74%), Gaps = 13/152 (8%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFI-LGR 119
FVRYKYADEAQKA+DRLDG F F+ + L LF ++ F+ GR
Sbjct: 61 FVRYKYADEAQKAIDRLDGGFFFFDCAPHVGILEL------------LFLIIVDFLGAGR 108
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 109 NVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 140
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 103/147 (70%), Gaps = 39/147 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEA KAV+RLD GRV
Sbjct: 61 FVRYKYKDEAHKAVERLD---------------------------------------GRV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE 147
VDGREITVQFAKYGPNAEKI +GR+VE
Sbjct: 82 VDGREITVQFAKYGPNAEKISKGRVVE 108
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 52/98 (53%), Gaps = 26/98 (26%)
Query: 207 ASPDRHKNHGRGKYDEERRSRSRSYESASPPRHSPNSKRSPSPRKTHKG-EINPDE---- 261
ASPD K RG+YD E RS SRS SASP R SP RS SP+KT E++PD+
Sbjct: 189 ASPD-EKRRVRGRYDNESRSHSRSL-SASPARRSP---RSSSPQKTSPAREVSPDKRSNE 243
Query: 262 -----------RSPALKRVSPDG-----RRSVSRSLSP 283
RSPAL++ SP RRS RS SP
Sbjct: 244 RSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSP 281
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 103/147 (70%), Gaps = 39/147 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEA KAV+RLDG RV
Sbjct: 61 FVRYKYKDEAHKAVERLDG---------------------------------------RV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE 147
VDGREITVQFAKYGPNAEKI +GR+VE
Sbjct: 82 VDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 112/153 (73%), Gaps = 16/153 (10%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLI--FFILG 118
FVRYKYADEAQKA+DRLDG F F ++ I L F +I F G
Sbjct: 61 FVRYKYADEAQKAIDRLDGGF--------------FFDCAPHVGILELLFLIIVDFLGAG 106
Query: 119 RVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
R VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 107 RNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 139
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 126/174 (72%), Gaps = 39/174 (22%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG +
Sbjct: 61 FVRYKYADEAQKAVERLDGT---------------------------------------M 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDY 174
VDGREITVQFAKYGPNAE+I +G+I E+ KS+ RSRSRSPR R+RDE+RDKDY
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSRSPRRRHRDEYRDKDY 135
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 141/224 (62%), Positives = 167/224 (74%), Gaps = 41/224 (18%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLN+TFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLDG R+
Sbjct: 61 FVRYKYADEASKAVDRLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVES-SSKSKGRSRSRSPRPRYRDEHRDKDYRRRSR 179
VDGREITVQFAKYGPNAE+IQ+GRI+E+ RSRS S R R+RD++++KDYRRRSR
Sbjct: 82 VDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRSPSKRSRHRDDYKEKDYRRRSR 141
Query: 180 SRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE 223
SRS +R++RDR+R ++RDHRRRSRSRSASP +K GRG++D+E
Sbjct: 142 SRSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRGRHDDE 184
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 191/307 (62%), Gaps = 57/307 (18%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLDG R+
Sbjct: 61 FVRYKYADEASKAVDRLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
VDGREITVQFAKYGPNAE+I +GRI+E+S +SK R R+ D++RDK YRRRSRS
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIETSPRSKSSRSRSPSRRRHHDDYRDKGYRRRSRS 141
Query: 181 RSRERYD-RDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE---------------- 223
RS +RY+ ++RD+RRRSRSRSASPD +K GRG+YD+E
Sbjct: 142 RSYDRYERDRYRGGRDRDYRRRSRSRSASPD-YKRRGRGRYDDERRSRSRSRSVDSRSPA 200
Query: 224 RRSRSRSYESASPPRHSPNSKRSPSPRKTHKGEINPDERSPALKRVSPDGRRSVSRSLSP 283
RRS S + SP SPSPR+ + D RSP + VSP GR S+S SP
Sbjct: 201 RRSPSPKRSPSPKKSISPKKSPSPSPRRESPDTRSRDGRSPTSRSVSPRGRPEASQSPSP 260
Query: 284 RRSPANE 290
R S +E
Sbjct: 261 RNSDGDE 267
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 107/147 (72%), Gaps = 39/147 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDL+PLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+D+LDG R+
Sbjct: 61 FVRYKYADEAQKAIDKLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE 147
+DGREI VQFAKYGPNAEKI++GR++E
Sbjct: 82 LDGREIMVQFAKYGPNAEKIRKGRVME 108
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 107/147 (72%), Gaps = 39/147 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDL+PLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+D+LDG R+
Sbjct: 61 FVRYKYADEAQKAIDKLDG---------------------------------------RM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE 147
+DGREI VQFAKYGPNAEKI++GR++E
Sbjct: 82 LDGREIMVQFAKYGPNAEKIRKGRVME 108
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 106/148 (71%), Gaps = 39/148 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLD GRV
Sbjct: 61 FVRYKYADEAQKAVERLD---------------------------------------GRV 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVES 148
VDGREITVQFAKYGP AE+I +GRIVE+
Sbjct: 82 VDGREITVQFAKYGPKAERIHKGRIVET 109
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 105/148 (70%), Gaps = 39/148 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEA KAVDRLD GR+
Sbjct: 61 FVRYKYADEASKAVDRLD---------------------------------------GRM 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVES 148
VDGREITVQFAKYGPNAE+I +GRI+E+
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGRIIET 109
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 121/169 (71%), Gaps = 39/169 (23%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVDRLDG R+
Sbjct: 61 FVRYKYEDEAQKAVDRLDG---------------------------------------RL 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEH 169
VDGRE+ VQFAKYGPNAE+IQ+GRI+E+ + +GRSRSRSPR YRD+H
Sbjct: 82 VDGREMMVQFAKYGPNAERIQKGRIMETLPRPRGRSRSRSPRRGYRDDH 130
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLDG +
Sbjct: 61 FVRYKYADEAQKAVERLDGT---------------------------------------M 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGREITVQFAKYGPNAE+I +G+I E+ K
Sbjct: 82 VDGREITVQFAKYGPNAERIHKGKISEAFPK 112
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDL+PLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAVDRLDG R
Sbjct: 61 FVRYKYADEAQKAVDRLDG---------------------------------------RN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE I++GR++E K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVIEEVEK 112
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYA+EAQKA+DRLD GR
Sbjct: 61 FVRYKYAEEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE I++GRI+E K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 105/151 (69%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYA+EAQKA+DRLD GR
Sbjct: 61 FVRYKYAEEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNAE I++GRI+E K
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 115/172 (66%), Gaps = 41/172 (23%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA++RLD GR
Sbjct: 61 FVRYKYADEAQKAIERLD---------------------------------------GRE 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP-RPR-YRDEHR 170
VDGR I VQFAKYG E IQ+GRI ++ K RS SRSP RPR RD+ R
Sbjct: 82 VDGRHIVVQFAKYGRKDEPIQRGRITDTGMKRVSRSASRSPKRPRSSRDDDR 133
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 105/153 (68%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYG NAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGXNAEPIRKGRVKEGVEKSQ 114
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 105/153 (68%), Gaps = 39/153 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVF PRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRD 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 153
VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 103/147 (70%), Gaps = 39/147 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY DEAQKAVDRLDG R+
Sbjct: 61 FVRYKYEDEAQKAVDRLDG---------------------------------------RL 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVE 147
VDGREI VQFAKYGPNAE+I +GRIVE
Sbjct: 82 VDGREIMVQFAKYGPNAERINKGRIVE 108
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 141/210 (67%), Gaps = 42/210 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEAQ A+D LDG+
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRF-------------------------------------- 82
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
DGR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPR RYR+++ D+DYRRRS+S
Sbjct: 83 -DGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRYREDYWDRDYRRRSQS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPD 210
RSRERY++ YR + DHRR R+ S SPD
Sbjct: 142 RSRERYEQAGYR--DGDHRRH-RTHSISPD 168
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 141/210 (67%), Gaps = 42/210 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEAQ A+D LDG+
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRF-------------------------------------- 82
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
DGR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPR RYR+++ D+DYRRRS+S
Sbjct: 83 -DGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRYREDYWDRDYRRRSQS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPD 210
RSRERY++ YR + DH RR R+ S SPD
Sbjct: 142 RSRERYEQAGYR--DGDH-RRHRTHSISPD 168
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 111/166 (66%), Gaps = 40/166 (24%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA++RLD GR
Sbjct: 61 FVRYKYADEAQKAIERLD---------------------------------------GRE 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP-RPRY 165
VDGR I VQFAKYG E IQ+GRI ++ K RS SRSP RP +
Sbjct: 82 VDGRHIVVQFAKYGRKDEPIQRGRITDTGMKRVSRSASRSPKRPSW 127
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 100/146 (68%), Gaps = 39/146 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRD+RTGDSRGFA
Sbjct: 1 MSHFGRFGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIV 146
VDGR I VQFAKYGPNAE Q+GR+
Sbjct: 82 VDGRNIMVQFAKYGPNAEATQRGRVT 107
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 101/151 (66%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 82 VDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 101/151 (66%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 82 VDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 101/151 (66%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 82 VDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 100/140 (71%), Gaps = 39/140 (27%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYA+EAQKAVDRLD GRV
Sbjct: 61 FVRYKYAEEAQKAVDRLD---------------------------------------GRV 81
Query: 121 VDGREITVQFAKYGPNAEKI 140
VDGREI VQFAKYGPNAE++
Sbjct: 82 VDGREIMVQFAKYGPNAERM 101
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 105/155 (67%), Gaps = 40/155 (25%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVRYKY DEAQKAV+RLDG R
Sbjct: 61 AFVRYKYEDEAQKAVERLDG---------------------------------------R 81
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 154
+VDGREI VQFAKYGPNAE+I +GRIVE + G
Sbjct: 82 LVDGREIMVQFAKYGPNAERINKGRIVEPVPRPGG 116
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 99/140 (70%), Gaps = 39/140 (27%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKAV+RLD GRV
Sbjct: 61 FVRYKYADEAQKAVERLD---------------------------------------GRV 81
Query: 121 VDGREITVQFAKYGPNAEKI 140
VDGREITVQFAKYGP AE++
Sbjct: 82 VDGREITVQFAKYGPKAERM 101
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 103/148 (69%), Gaps = 40/148 (27%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVRYKY DEAQKAVDRLDG R
Sbjct: 61 AFVRYKYEDEAQKAVDRLDG---------------------------------------R 81
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVE 147
+VDGREI VQFAKYGPNAE+I +GRI+E
Sbjct: 82 LVDGREIMVQFAKYGPNAERINKGRIME 109
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 103/148 (69%), Gaps = 40/148 (27%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVRYKY DEAQKAVDRLDG R
Sbjct: 61 AFVRYKYEDEAQKAVDRLDG---------------------------------------R 81
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVE 147
+VDGREI VQFAKYGPNAE+I +GRI+E
Sbjct: 82 LVDGREIMVQFAKYGPNAERINKGRIME 109
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 105/155 (67%), Gaps = 40/155 (25%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVRYKY DEAQKAV+RLDG R
Sbjct: 61 AFVRYKYEDEAQKAVERLDG---------------------------------------R 81
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 154
+VDGREI VQFAKYGPNAE+I +GRIVE + G
Sbjct: 82 LVDGREIMVQFAKYGPNAERINKGRIVEPVPRPGG 116
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 103/148 (69%), Gaps = 40/148 (27%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVRYKY DEAQKAVDRLD GR
Sbjct: 61 AFVRYKYEDEAQKAVDRLD---------------------------------------GR 81
Query: 120 VVDGREITVQFAKYGPNAEKIQQGRIVE 147
+VDGREI VQFAKYGPNAE+I +GRI+E
Sbjct: 82 LVDGREIMVQFAKYGPNAERINKGRIME 109
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 97/141 (68%), Gaps = 39/141 (27%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQ 141
VDGR I VQFAKYGPNAE I
Sbjct: 82 VDGRNIMVQFAKYGPNAEPIH 102
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 102/151 (67%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKY+DEAQKA++RLD GR
Sbjct: 61 FVRYKYSDEAQKAIERLD---------------------------------------GRA 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQ AKYG N E I +GRI +++ K
Sbjct: 82 VDGRNIVVQSAKYGRNDEPIHRGRITDTTVK 112
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 149/217 (68%), Gaps = 42/217 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ RDT+SLLVLN++FRTTADDLFPLF++YG+VVD+ IPRDRRTG+SRGFA
Sbjct: 1 MSRFGRSGHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEAQ A+D LDG+
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFG------------------------------------- 83
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
GR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPRPRYR++++D+DYRRRS+S
Sbjct: 84 --GRALMVQFAKYGPNAEKIHRGRITEENPKPRGRFRSRSPRPRYREDYQDRDYRRRSQS 141
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGR 217
RSRERY++DRYR + DHRR R+RS SPD + H R
Sbjct: 142 RSRERYEQDRYR--DGDHRRH-RTRSISPDYDRKHNR 175
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/149 (58%), Positives = 101/149 (67%), Gaps = 39/149 (26%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA++RLD GR
Sbjct: 61 FVRYKYADEAQKAIERLD---------------------------------------GRT 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESS 149
VDGR I VQ AKYG N E I +GRI +++
Sbjct: 82 VDGRNIVVQSAKYGRNDEPIHRGRITDTT 110
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 106/190 (55%), Gaps = 76/190 (40%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFR---------------------------------- 26
MSHFG+SGPPDIRDT+SLLVLNI+FR
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFREGDLTLAPPAPPTLPTLSLPLSLIASFSYPSPPR 60
Query: 27 ---TTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGLFLN 83
TTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA+DRLDG
Sbjct: 61 FTGTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDG---- 116
Query: 84 FNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYGPNAEKIQQG 143
R VDGR I VQFAKYGPNAE I++G
Sbjct: 117 -----------------------------------RDVDGRNIMVQFAKYGPNAEPIRKG 141
Query: 144 RIVESSSKSK 153
R+ E KS+
Sbjct: 142 RVKEGVEKSQ 151
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 142/210 (67%), Gaps = 42/210 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++S+LVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEA+ A+D LDG+
Sbjct: 63 FVRYNYEDEARDAIDGLDGMRF-------------------------------------- 84
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
DGR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPR RYR+++RD+DYRRRS+S
Sbjct: 85 -DGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRYREDYRDRDYRRRSQS 143
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPD 210
RSRERY++ YR + DHRR R+ S SPD
Sbjct: 144 RSRERYEQAGYR--DGDHRRH-RTHSISPD 170
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 104/162 (64%), Gaps = 39/162 (24%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEAQ A+D LDG+
Sbjct: 63 FVRYNYEDEAQDAIDGLDGMRF-------------------------------------- 84
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPR 162
DGR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPR
Sbjct: 85 -DGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 141/210 (67%), Gaps = 42/210 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++S+LVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEA+ A+D LDG
Sbjct: 63 FVRYNYEDEARDAIDGLDGXRF-------------------------------------- 84
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRS 180
DGR + VQFAKYGPNAEKI +GRI E + K +GR RSRSPR RYR+++RD+DYRRRS+S
Sbjct: 85 -DGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRYREDYRDRDYRRRSQS 143
Query: 181 RSRERYDRDRYRSKERDHRRRSRSRSASPD 210
RSRERY++ YR + DHRR R+ S SPD
Sbjct: 144 RSRERYEQAGYR--DGDHRRH-RTHSISPD 170
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 96/140 (68%), Gaps = 39/140 (27%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRTTADDL+PLF++YGKVVD+FIPRDRR+G+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYK+ DEAQKA+DRLDG+
Sbjct: 61 FVRYKHVDEAQKAIDRLDGM---------------------------------------T 81
Query: 121 VDGREITVQFAKYGPNAEKI 140
+DGR+I VQFAKYG N EK+
Sbjct: 82 IDGRQIAVQFAKYGRNDEKM 101
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 95/151 (62%), Gaps = 47/151 (31%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRYKYADEAQKA+DRLD GR
Sbjct: 61 FVRYKYADEAQKAIDRLD---------------------------------------GRN 81
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
VDGR I VQFA + +GR+ E K
Sbjct: 82 VDGRNIMVQFANH--------KGRVKEGVEK 104
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 8/115 (6%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFF 115
FVRYKY DEA KAV+RLDG +H +L L++ + L +GF FL F
Sbjct: 61 FVRYKYKDEAHKAVERLDGK------IHPLLLVLLYV--FMLLVLGFDMKFLSLF 107
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 79/79 (100%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDG 79
FVRYKY+DEAQKA++RLDG
Sbjct: 61 FVRYKYSDEAQKAIERLDG 79
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 79/79 (100%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDG 79
FVRYKY+DEAQKA++RLDG
Sbjct: 61 FVRYKYSDEAQKAIERLDG 79
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 95/151 (62%), Gaps = 39/151 (25%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY Y DEAQ A+D LDG+
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRF-------------------------------------- 82
Query: 121 VDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
DGR + VQFAKYGPNAEKI +GRI E + K
Sbjct: 83 -DGRALMVQFAKYGPNAEKIHRGRITEENPK 112
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 87/130 (66%), Gaps = 39/130 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRDRRTGDSRGFAFVRYK+AD
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHAD 60
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
EAQKA++RLDG KN VDGR I V
Sbjct: 61 EAQKAIERLDG-------------------KN--------------------VDGRNIVV 81
Query: 129 QFAKYGPNAE 138
QFAKYG N E
Sbjct: 82 QFAKYGRNDE 91
>gi|448878316|gb|AGE46121.1| arginine/serine-rich splicing factor SC30 transcript II [Sorghum
bicolor]
Length = 188
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 59/61 (96%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 F 61
F
Sbjct: 61 F 61
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 77/128 (60%), Gaps = 39/128 (30%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
++GPPDI TYSLLVLNI+FRTT +DL PLF+KYG+VVD +IPR+RR G SRGFAFVR++
Sbjct: 17 RTGPPDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFR 76
Query: 66 YADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGRE 125
++A+KA++ +D GR VDGR
Sbjct: 77 KEEDARKAMEEMD---------------------------------------GREVDGRS 97
Query: 126 ITVQFAKY 133
ITVQFAKY
Sbjct: 98 ITVQFAKY 105
>gi|147792441|emb|CAN70275.1| hypothetical protein VITISV_028726 [Vitis vinifera]
Length = 246
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 57/97 (58%), Gaps = 39/97 (40%)
Query: 52 RTGDSRGFAFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFF 111
RTG+SRGFAFVRYKYADEAQKAVDRLDG
Sbjct: 7 RTGESRGFAFVRYKYADEAQKAVDRLDG-------------------------------- 34
Query: 112 LIFFILGRVVDGREITVQFAKYGPNAEKIQQGRIVES 148
R+VDGREITVQFAKYGPNAE+I +GRIVE+
Sbjct: 35 -------RIVDGREITVQFAKYGPNAERIHKGRIVET 64
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 66/130 (50%), Gaps = 39/130 (30%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GPP I SL V N+T+RT+ +DL F+KYG++ D++IPRDR T +SRGFAFVRY
Sbjct: 7 GSRGPPQIEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRY 66
Query: 65 KYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGR 124
+A+ A+D +D G+V+DGR
Sbjct: 67 YEERDAEDAMDSMD---------------------------------------GKVIDGR 87
Query: 125 EITVQFAKYG 134
EI V A+YG
Sbjct: 88 EIRVAMARYG 97
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 73/154 (47%), Gaps = 40/154 (25%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG L DGRE+ V
Sbjct: 67 DAEDAMDAMDGALL---------------------------------------DGRELRV 87
Query: 129 QFAKYG-PNAEKIQQGRIVESSSKSKGRSRSRSP 161
Q A+YG P GR S RSRS SP
Sbjct: 88 QMARYGRPPDSHYGGGRRGPPKKHSGRRSRSHSP 121
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
+GPP+I +L V N+ + ++ DDL +FEKYG++ DV++PRD RTG+ RGFAFVR+
Sbjct: 18 NGPPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMD 77
Query: 67 ADEAQKAVDRLDGLFL 82
+A A+DR+DG F
Sbjct: 78 QRDADDAIDRMDGEFF 93
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 66/131 (50%), Gaps = 39/131 (29%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
+ GPP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR
Sbjct: 3 YSARGPPKIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVR 62
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDG 123
+ +A++A+ +D GRV+DG
Sbjct: 63 FYEKRDAEEALQEMD---------------------------------------GRVLDG 83
Query: 124 REITVQFAKYG 134
RE+ VQ A+YG
Sbjct: 84 RELRVQMARYG 94
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 73 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 132
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 133 DAEDAMDAMDGA---------------------------------------VLDGRELRV 153
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 154 QMARYG 159
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP+I +SL V N+T+RTT +DL FEKYG V DV+IPRDR T +SRGFAFVRY
Sbjct: 6 GPPEIEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDK 65
Query: 68 DEAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 66 RDAEDALDAMDGATLD 81
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 219
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 241
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 41 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 100
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 101 DAEDAMDAMDGAVLD 115
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris
gallopavo]
Length = 239
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS +G+ PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVR+ +AQ A+D +D GR+
Sbjct: 60 FVRFYDKRDAQDALDAMD---------------------------------------GRM 80
Query: 121 VDGREITVQFAKYG 134
+DGRE+ VQ A+YG
Sbjct: 81 LDGRELRVQMARYG 94
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS +G+ PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVR+ +AQ A+D +D GR+
Sbjct: 60 FVRFYDKRDAQDALDAMD---------------------------------------GRM 80
Query: 121 VDGREITVQFAKYG 134
+DGRE+ VQ A+YG
Sbjct: 81 LDGRELRVQMARYG 94
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RT+ +DL FEKYG+V DV+IPRD T +++GFAFVRY
Sbjct: 4 GPPQIEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEK 63
Query: 68 DEAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 64 RDAEDAIDSMDGAVLD 79
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 221
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 40/124 (32%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++FR T D++ P+FEKYG+V D++IPRD T +SRGFAFVR+ +A+ A++R
Sbjct: 3 SLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMER 62
Query: 77 LDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYG-P 135
LDG V+DGRE+ VQ A+YG P
Sbjct: 63 LDGY---------------------------------------VIDGREMRVQLARYGRP 83
Query: 136 NAEK 139
N K
Sbjct: 84 NENK 87
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAILD 81
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I YSL + NI+++TT DL LFEKYG++ D+ IPRDR T S+GF FVRY
Sbjct: 6 GPPSIDGLYSLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSR 65
Query: 68 DEAQKAVDRLDGLFLN 83
+A+ A+DR+DG +++
Sbjct: 66 RDAEYAMDRMDGRWID 81
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +DG V+DGRE+ V
Sbjct: 67 DAEDAMDAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAILD 81
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I YSL + NI+++T DL LFEKYG++ D+ IPRDR T S+GF FVR+
Sbjct: 6 GPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSR 65
Query: 68 DEAQKAVDRLDGLFLN 83
+A+ A+DR+DG +++
Sbjct: 66 RDAEYAMDRMDGRWVD 81
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 39/136 (28%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP+I SL V N+T+RTT +DL F+KYG V DV+IPRDR T +SRGFAFVR+
Sbjct: 6 GPPEIDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREIT 127
+A+ A+D +DG ++DGRE+
Sbjct: 66 RDAEDALDSMDGA---------------------------------------IMDGRELR 86
Query: 128 VQFAKYGPNAEKIQQG 143
VQ A+YG E ++G
Sbjct: 87 VQMARYGRPTEPYRRG 102
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIG 106
+A+ A+D +DG ++ ++ L L L +G
Sbjct: 67 DAEDAMDAMDGAVP--GLAADLATAARSLGPALVLDLG 102
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 40/132 (30%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
++G++ PP I SL V N+T+RTT +DL +FEKYG V DV+IPR T +SRGFAFV
Sbjct: 2 NYGRA-PPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 63 RYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVD 122
R+ + + A+D LDG L D
Sbjct: 61 RFYDKRDCEDAMDSLDGYIL---------------------------------------D 81
Query: 123 GREITVQFAKYG 134
GRE+ VQ A+YG
Sbjct: 82 GRELRVQMARYG 93
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 49/166 (29%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+TFRTT DDL +FE+ G+V D++IPRDR + +SRGFAFVR+
Sbjct: 54 PPRIDGMVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKR 113
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 114 DAEDALDAMD---------------------------------------GRILDGRELRV 134
Query: 129 QFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDY 174
Q A+YG + S +S+GR R + RD+ R+ D+
Sbjct: 135 QMARYGRPS----------SPYRSRGRRRGDHDQGVVRDQDREDDH 170
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + + PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 8 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 66
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVR+ +A+ A+D +D GR+
Sbjct: 67 FVRFYDKRDAEDALDAMD---------------------------------------GRM 87
Query: 121 VDGREITVQFAKYG 134
+DGRE+ VQ A+YG
Sbjct: 88 LDGRELRVQMARYG 101
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
FG +GPPDI SL V N+T+RTT +DL +F K+G V DV+IPR+ R +SRGFAFVR
Sbjct: 63 FG-NGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 121
Query: 64 YKYADEAQKAVDRLDGLFLN 83
+ +A++A+D LDG L+
Sbjct: 122 FFDRRDAEEAMDALDGYRLD 141
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 20/150 (13%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
FG GPPDI SL V N+T+RTT +DL +F K+G V DV+IPR+ R +SRGFAFVR
Sbjct: 3 FGGRGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 62
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVHEILK---------SSLFLRKNLYLCIGFLFFFLIF 114
+ + L L + E LK +++ +N F F+ F
Sbjct: 63 FGNGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 122
Query: 115 F-----------ILGRVVDGREITVQFAKY 133
F + G +DGRE+ + AKY
Sbjct: 123 FDRRDAEEAMDALDGYRLDGRELRIAMAKY 152
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFV----HEILKSSLFLRKNLYLCIG 106
+A+ A+D +DG V ++ ++ L L L +G
Sbjct: 67 DAEDAMDAMDGADPGVGAVPGLAADLATAARSLGPALVLDLG 108
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + + PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVR+ +A+ A+D +D GR+
Sbjct: 60 FVRFYDKRDAEDALDAMD---------------------------------------GRM 80
Query: 121 VDGREITVQFAKYG 134
+DGRE+ VQ A+YG
Sbjct: 81 LDGRELRVQMARYG 94
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella
vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + GPP+I SL V N+T+RTT +DL +F+KYG + D++IPRDR T +SRGFA
Sbjct: 1 MSFDSQRGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGLFLN 83
FVR+ +A+ A+D +D L+
Sbjct: 61 FVRFYEKRDAEDAMDCMDRHLLD 83
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +FEKYG V DV+IPR T DSRGFAFVR+
Sbjct: 6 GPPTIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGLFLN 83
+ + A+D LDG L+
Sbjct: 66 RDGEDAMDALDGYILD 81
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKY +V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR + +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGALLD 81
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I YSL + NI+++T DL LFEKYG++ D+ IPRDR T S+GF FVR+
Sbjct: 282 GPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSR 341
Query: 68 DEAQKAVDRLDGLFLN 83
+A+ A+DR+DG +++
Sbjct: 342 RDAEYAMDRMDGRWVD 357
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 52/167 (31%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + RT RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWS 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+AQ A +DG V+DGRE+ V
Sbjct: 67 DAQDAEAAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYGPNAEKIQQGRIVESSSKSKGRS-------RSRSPRPRYRDE 168
Q A+YG ++ S + +GRS RSRSPR ++R +
Sbjct: 88 QVARYG------RRDLSGSSQEEPRGRSWGGRYGRRSRSPRGQHRSQ 128
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 41/141 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M + KS PP I SL V N+ +RTT +DL +F +YG+V DV+IPRD T +SRGFA
Sbjct: 1 MERYAKS-PPRIEGMVSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +D GR
Sbjct: 60 FVRYPTDREADSAIREMD---------------------------------------GRR 80
Query: 121 VDGREITVQFAKYG-PNAEKI 140
+DGREI VQ AKYG PN+ ++
Sbjct: 81 IDGREIRVQRAKYGRPNSRRM 101
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +FEKYG++ DV+IPRDR T SRGFAFVR+ + A+ A+D
Sbjct: 5 SLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALDA 64
Query: 77 LDGLFLN 83
+DG+ L+
Sbjct: 65 VDGVVLD 71
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L + EKYG+V D +IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DAEDAMDAMDGAVLD 81
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 39/127 (30%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP I SL V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+
Sbjct: 6 APPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREIT 127
+ + A+D LDG + DGRE+
Sbjct: 66 RDCEDAMDALDGYMM---------------------------------------DGRELR 86
Query: 128 VQFAKYG 134
VQ A+YG
Sbjct: 87 VQMARYG 93
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFERR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A++A+D LD GR++DGRE+ V
Sbjct: 67 DAEEALDSLD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 43/138 (31%)
Query: 1 MSHFGKSG----PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDS 56
MS+ G G PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +S
Sbjct: 1 MSNGGGLGGARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 60
Query: 57 RGFAFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFI 116
RGFAFVR+ +A+ A++ +D
Sbjct: 61 RGFAFVRFYDKRDAEDALEAMD-------------------------------------- 82
Query: 117 LGRVVDGREITVQFAKYG 134
GR++DGRE+ VQ A+YG
Sbjct: 83 -GRMLDGRELRVQMARYG 99
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 18 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 77
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 78 DAEDALEAMD---------------------------------------GRMLDGRELRV 98
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 99 QMARYG 104
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 66/134 (49%), Gaps = 41/134 (30%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSH PP+I SL V N+T+RTT +DL FEKYG V DV+IPRDR + +SRGFA
Sbjct: 1 MSH--SRTPPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFA 58
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVR+ +A A++ +DG V
Sbjct: 59 FVRFFDKRDADDAMESMDGA---------------------------------------V 79
Query: 121 VDGREITVQFAKYG 134
+DGRE+ VQ AKYG
Sbjct: 80 MDGRELRVQSAKYG 93
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEK---YGKVVDVFIPRDRRTGDSRGFAFVRYK 65
PPD+ SL V N+T+RT+ D L +FEK YG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFH 66
Query: 66 YADEAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 67 DKRDAEDAMDAMDGAVLD 84
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A++A+D LD GR++DGRE+ V
Sbjct: 67 DAEEALDSLD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L P+FEKYG+V DV+IPR+ T GFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+AQ A +DG V+DGRE+ V
Sbjct: 67 DAQDAEAAMDGA---------------------------------------VLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +
Sbjct: 7 PPDVDGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRS 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNL 101
+AQ A +D L+ + ++ +L+ R++L
Sbjct: 67 DAQDAEAAMDRAMLDGRELR--VQMALYGRRDL 97
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRLLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRLLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQIAKYG 94
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRLLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 77 DAEDALEAMD---------------------------------------GRMLDGRELRV 97
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 98 QMARYG 103
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 39/127 (30%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP I SL V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+
Sbjct: 6 APPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREIT 127
+ + A+D LDG + DGRE+
Sbjct: 66 RDCEDAMDALDGYMM---------------------------------------DGRELR 86
Query: 128 VQFAKYG 134
VQ A+YG
Sbjct: 87 VQMARYG 93
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A++A+D +D GR++DGRE+ V
Sbjct: 67 DAEEALDTMD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR+VDGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRMVDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRL 77
+A+ A+D +
Sbjct: 67 DAEDAMDAM 75
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+T+ T++ L +FEKYG + DV+IPRDR T +SRGFAF+R+ Y A+ A+
Sbjct: 14 SIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFCYKHHAEDALGA 73
Query: 77 LDGLFLNFNFVHEILKSSLFLRKNLYLCIG 106
LDG+ L+ HE+ L LC G
Sbjct: 74 LDGILLD---GHELQVQLAHCACPLELCQG 100
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A++A+D LD GR++DGRE+ V
Sbjct: 67 DAEEALDSLD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 76 DAEDALEAMD---------------------------------------GRMLDGRELRV 96
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 97 QMARYG 102
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+ +A
Sbjct: 66 DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDA 125
Query: 71 QKAVDRLDGLFLN 83
+ A+D +DG L+
Sbjct: 126 EDAMDAMDGAVLD 138
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A++A+D LD GR++DGRE+ V
Sbjct: 67 DAEEALDSLD---------------------------------------GRMLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 40/135 (29%)
Query: 1 MSH-FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MSH G PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGF
Sbjct: 1 MSHNSGGRPPPRIDGMISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGR 119
AFVR+ +A+ A++ +D GR
Sbjct: 61 AFVRFYDKRDAEDALEAMD---------------------------------------GR 81
Query: 120 VVDGREITVQFAKYG 134
+DGRE+ VQ A+YG
Sbjct: 82 KLDGRELRVQMARYG 96
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 39/127 (30%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +FEKYG V DV+IP+DR + +SRGFAFVR+
Sbjct: 5 GPPRIEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDR 64
Query: 68 DEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREIT 127
+ + A+ +D GR++DGRE+
Sbjct: 65 RDGEDAMHAMD---------------------------------------GRMMDGRELR 85
Query: 128 VQFAKYG 134
VQ A+YG
Sbjct: 86 VQLARYG 92
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A++ +D GR++DGRE+ V
Sbjct: 77 DAEDALEAMD---------------------------------------GRMLDGRELRV 97
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 98 QMARYG 103
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 151
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 39/125 (31%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL V N+T+ TT +DL FEKYG+V D++IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQ 129
A+ A+D +DG NLY DGR++ VQ
Sbjct: 68 AEDAMDSMDG--------------------NLY-------------------DGRKLRVQ 88
Query: 130 FAKYG 134
A+YG
Sbjct: 89 MARYG 93
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 39/125 (31%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQ 129
AQ A +DG V+DGRE+ VQ
Sbjct: 68 AQDAEAAMDGA---------------------------------------VLDGRELRVQ 88
Query: 130 FAKYG 134
A+YG
Sbjct: 89 MARYG 93
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 62
Query: 77 LDGLFLN 83
+DG L+
Sbjct: 63 MDGAVLD 69
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P+I SL V NIT+RTT DDL +F+KYG++ DV+IPRDRR G+SRG+AFVRY +
Sbjct: 1 PEISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDRR-GESRGYAFVRYHDRRD 59
Query: 70 AQKAVDRLDG 79
A+ A+D + G
Sbjct: 60 AEDAMDCVHG 69
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYYTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 263 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 322
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 323 DAQDAEAAMDGAVLD 337
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 153 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 212
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 213 DAQDAEAAMDGAELD 227
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAVLD 81
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 39/126 (30%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+D +D GR++DGRE+ V
Sbjct: 67 DAEDALDAMD---------------------------------------GRLLDGRELRV 87
Query: 129 QFAKYG 134
Q A+YG
Sbjct: 88 QMARYG 93
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 40/134 (29%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRV 120
FVRY EA A+ +DG H+
Sbjct: 60 FVRYCTDREADCAIRGMDG--------HK------------------------------- 80
Query: 121 VDGREITVQFAKYG 134
VDGRE+ VQ AKYG
Sbjct: 81 VDGREVRVQRAKYG 94
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVRY+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYR--- 63
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 64 DAEDALDAMDGRMLD 78
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKY V DV+IPR+ T RGFAFVR+
Sbjct: 201 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFVRFHDRS 260
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 261 DAQDAEAAMDGAVLD 275
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 39/125 (31%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD SL V N+T+ TT +DL FEKYG+V D++IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDFEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQ 129
A+ A+D +DG NLY DGR++ VQ
Sbjct: 68 AEDAMDSMDG--------------------NLY-------------------DGRKLRVQ 88
Query: 130 FAKYG 134
A+YG
Sbjct: 89 MARYG 93
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAELD 81
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 39/118 (33%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RTTA+DL +FE+ G V D++IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDS 62
Query: 77 LDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYG 134
LD GR++DGRE+ VQ A+YG
Sbjct: 63 LD---------------------------------------GRMLDGRELRVQMARYG 81
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A +DG L+
Sbjct: 67 DAEDAEAAMDGAELD 81
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 67 DAQDAEAAMDGAVLD 81
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 39/125 (31%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T R FAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQ 129
AQ A +DG V+DGRE+ VQ
Sbjct: 68 AQDAEAAMDGA---------------------------------------VLDGRELRVQ 88
Query: 130 FAKYG 134
A+YG
Sbjct: 89 MARYG 93
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 113 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 172
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A +DG L+
Sbjct: 173 DAEDAEAAMDGAELD 187
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 39/117 (33%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+ + + A+D L
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYG 134
DG + DGRE+ VQ A+YG
Sbjct: 61 DGYMM---------------------------------------DGRELRVQMARYG 78
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRR 66
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A D +DG L+
Sbjct: 67 DAEDAEDAMDGAELD 81
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ PP + + SL V N+T+RT+ + L FEKYG V DV+IPRDR + +SRGFA
Sbjct: 1 MSRGGRP-PPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGLFLN 83
FVR+ +A+ A+D +DG ++
Sbjct: 60 FVRFYDKRDAEDAMDCMDGKTMD 82
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 39/117 (33%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+ +A+ A++ +
Sbjct: 48 CVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 107
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYG 134
D GR++DGRE+ VQ A+YG
Sbjct: 108 D---------------------------------------GRMLDGRELRVQMARYG 125
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 45/67 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI F + ++L +FE GK+ DV+IPRD RTG+ RGFAFVRY +A AVDR
Sbjct: 3 TLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDR 62
Query: 77 LDGLFLN 83
LDG N
Sbjct: 63 LDGTRFN 69
>gi|193787706|dbj|BAG53419.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 5 GKSGPPDIR---DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
G+ G PD + L V + TT +++ PLFE +G +V+V +PRDRR+G +G+ F
Sbjct: 118 GRPGSPDHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCF 177
Query: 62 VRYKYADEAQKAVDRLDGLFLNFNFVHEI 90
V+Y +EA +A+ L+G + VH +
Sbjct: 178 VKYATIEEADRAIRALNGQYTIPGEVHPL 206
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
+++++ L+V NI F T +DL LF YG V+D+FIP DR+ RGFAFVR + ++A
Sbjct: 64 ELQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTLEQA 123
Query: 71 QKAVDRLDG 79
+ A+ LDG
Sbjct: 124 EAAIAALDG 132
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
KS PDI YSL V NI +R + +F +G++ DV++PRDR TG+SRGFAFVR+
Sbjct: 1 KSTAPDISGMYSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFI 60
Query: 66 YADEAQKAVDRLD 78
+EA+ A+ ++
Sbjct: 61 DKNEAEDAIKAMN 73
>gi|193785174|dbj|BAG54327.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GPPDI YSL + N+ + T + L LF K+G++ DV++PRD T SRGFAFVR+
Sbjct: 20 GPKGPPDISGLYSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRF 79
Query: 65 KYADEAQKAVDRLDGLFLN 83
K A+ A+ D LN
Sbjct: 80 KDRTAAEDAIKEFDQKELN 98
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ + L +FEKYG+V DV+IPRDR + +SRGFAFVR+ +A+ A+D
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 77 LDGLFLN 83
+DG L+
Sbjct: 61 MDGALLD 67
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
K GPPDI + +S+ + N++F T +++ +F YG++ DV++PR+ T RGFAFVRY
Sbjct: 48 KKGPPDISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYV 107
Query: 66 YADEAQKAVDRL 77
A A+D +
Sbjct: 108 EKQSADAAIDAM 119
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N++F+ T DDL F +YGKVV V +P+DR TG RGFAFV E A+D
Sbjct: 2 SVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAIDA 61
Query: 77 LDG 79
LDG
Sbjct: 62 LDG 64
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ +S+ + N+ T +DL FEKYGK+ D++IPR+ G +RGF FVRY D
Sbjct: 7 PTDVNSLFSVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNED 66
Query: 69 EAQKAVDR 76
EA+KA+D
Sbjct: 67 EARKALDE 74
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP++ ++L V N+ F+ +D+L LF K+G++ DV+IPR R + +SRGFAFVR+
Sbjct: 350 PPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKR 409
Query: 69 EAQKAVDRLDG 79
+A+ A+D ++G
Sbjct: 410 DAEDAIDGMEG 420
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46
Splicing Factor
Length = 103
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G SGP D+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 4 GSSGP-DVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRF 62
Query: 65 KYADEAQKAVDRLDGLFLN 83
+AQ A +DG L+
Sbjct: 63 HDRRDAQDAEAAMDGAELD 81
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
SG D D + + N+ F DL LF ++G++ DV++P+DR TG SRGFA V ++
Sbjct: 516 SGSNDTSDYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQ 575
Query: 67 ADEAQKAVDRLDGLFL 82
+ A+KA++ + LFL
Sbjct: 576 LESAKKALENTNPLFL 591
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPDI SL + N+++RT A+ L F K+G++ DV+IP+D+ G+SRGFAFVR+
Sbjct: 6 PPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGLFLN 83
+A A+D L G L+
Sbjct: 65 DAGDAIDDLAGKDLD 79
>gi|325183684|emb|CCA18143.1| eukaryotic translation initiation factor 3 subunit G putative
[Albugo laibachii Nc14]
Length = 317
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V NI+ T DDL+ LF +G V+ V++ RDR T SRGFAFV + AD+A++A+++
Sbjct: 210 TLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETMQSRGFAFVSFARADDAERALNK 269
Query: 77 LDGLFLNFNFVHEILK 92
L G + + H ILK
Sbjct: 270 LQG----YGYDHLILK 281
>gi|293675|gb|AAA39332.1| IFN-response element binding factor 2, partial [Mus musculus]
Length = 277
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFA
Sbjct: 53 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 104
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 39/118 (33%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFAFVRY EA A+
Sbjct: 3 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 62
Query: 77 LDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYG 134
+DG H+ VDGRE+ VQ AKYG
Sbjct: 63 MDG--------HK-------------------------------VDGREVRVQRAKYG 81
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDINGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDGLFLN 83
A+ A+DR DG ++
Sbjct: 72 AEHALDRTDGKLVD 85
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 13 PDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 72
Query: 70 AQKAVDRLDGLFLN 83
A+ A+DR DG ++
Sbjct: 73 AEHALDRTDGKLVD 86
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI+F DD+ F+ YG V+DV++P+DR TG RG AFV+Y EA AV++
Sbjct: 2 SVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVEK 61
Query: 77 LDGL 80
G+
Sbjct: 62 ATGM 65
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ DV+IP+D + G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKD-KYGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDG 79
+A A+D+LDG
Sbjct: 65 DAGDAIDQLDG 75
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ DV+IP+D + G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKD-KYGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDG 79
+A A+D+LDG
Sbjct: 65 DAGDAIDQLDG 75
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDG 79
A+ A+DR DG
Sbjct: 72 AEHAMDRTDG 81
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G+ P ++ +SL V NIT T D + LF+ +G++ D+++PRDR T SRGF FVR+
Sbjct: 3 GRPPPSNVDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRF 62
Query: 65 KYADEAQKAVDRLDG 79
+A KA +++DG
Sbjct: 63 YEEADADKAAEKMDG 77
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL FEKYG V DV++P++ TG+ RGF FV+Y+YA++A +A R
Sbjct: 53 GLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQR 112
Query: 77 LDGLFLN 83
++ +
Sbjct: 113 MNHKIIG 119
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 13 PDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 72
Query: 70 AQKAVDRLDGLFLN 83
A+ A+DR DG ++
Sbjct: 73 AEHALDRTDGKLVD 86
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T +DL L E +G++ DV + RDR +G SRGF F R+K AQ+A+D L
Sbjct: 314 IFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQQAMDAL 373
Query: 78 DGLFLNFNFVH 88
DG +H
Sbjct: 374 DGSVYQGRLLH 384
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P+ + L++ NI F + +L LF +G V + +P+ + G RGF FV Y E
Sbjct: 732 PEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPK-KVDGSGRGFCFVEYATPQE 790
Query: 70 AQKAVDRLDG 79
+A + G
Sbjct: 791 TARATALVQG 800
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +AQ A
Sbjct: 5 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 64
Query: 77 LDGLFLN 83
+DG L+
Sbjct: 65 MDGAELD 71
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 50/70 (71%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P++ + ++L V N+ F+ +D+L LF K+G++ DV+IPR R + +SRGFAFVR+ +
Sbjct: 1 PNVDNMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRD 60
Query: 70 AQKAVDRLDG 79
A+ A++ ++G
Sbjct: 61 AEDAIEGMEG 70
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ + SLLV N+ F T+ + FE+YG V DV++P D T RGF FV Y +A
Sbjct: 85 DVSEGCSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDA 144
Query: 71 QKAVDRLDGLFLNFNFVHEIL 91
Q AV+RLDG L+ + + ++
Sbjct: 145 QDAVNRLDGSLLDGSTIRVVV 165
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +F++YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDGLFLN 83
A+ A+DR DG ++
Sbjct: 72 AEHALDRTDGKLVD 85
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+R+ S+LV NI TA+DL FEK+G++ DV+IPRD T SRGF F+ ++ A +A
Sbjct: 17 VRNKVSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDAD 76
Query: 72 KAVDRLDGLFLNFNFVHEIL 91
+A+ + D L+ ++ L
Sbjct: 77 EAIYQTDRTMLDGREINVCL 96
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ ++DL +FEKYG + DV+IP D T + RGFA+V++ Y D+A+ AVD
Sbjct: 11 SVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVDG 70
Query: 77 LDGLFL 82
LDG L
Sbjct: 71 LDGTTL 76
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+ S+LV N+TF+ + +DL FEK+G V DV+IP D T + RGFAF+ EA +A
Sbjct: 11 EGVSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEA 70
Query: 74 VDRLDGLFLNFNFVHEILKS 93
+ LDG L+ + +L +
Sbjct: 71 IAGLDGKDLDGRVIKVLLAA 90
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI+F T DL LF YGKV D F+P +R TG RGFAFV + EAQ A+ L
Sbjct: 4 LYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIADL 63
Query: 78 DG 79
DG
Sbjct: 64 DG 65
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
DI ++ L + N+++ TT DD+ FE +GK+ +V+IP DR + S+G AFV + ++A
Sbjct: 319 DIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIPEQA 378
Query: 71 QKAVDRLDGLFLNFNFVH 88
+A + LDG L +H
Sbjct: 379 MRAANDLDGKTLQGRIIH 396
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ NI F ++ LF YG++ V +P + TG RGF FV Y EA+ A++ L
Sbjct: 766 IKNIAFECKPIEIRKLFTTYGELKSVRLP-SKPTGGHRGFGFVEYLTEQEAKNAMEAL 822
>gi|301120270|ref|XP_002907862.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
gi|262102893|gb|EEY60945.1| eukaryotic translation initiation factor 3 subunit G, putative
[Phytophthora infestans T30-4]
Length = 325
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ T DDL LF +G V V++ +DR T SRGFAFV + Y ++A+KA
Sbjct: 211 DSATLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKA 270
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++L G + + H ILK
Sbjct: 271 LNKLQG----YGYDHLILK 285
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +FEK+G+V DV++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGLFLNFNFVHEIL-----KSSLFLRKNL 101
+D ++ N VH I+ KS +R++L
Sbjct: 66 MDRTMIDGNEVHVIIAQDRRKSPETMRRHL 95
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +FEK+G+V DV++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGLFLNFNFVHEIL-----KSSLFLRKNL 101
+D ++ N VH I+ KS +R++L
Sbjct: 66 MDRTMIDGNEVHVIIAQDRRKSPETMRRHL 95
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SLL+ NI+ R +D+L FE++G V DV+IPRD T + +GFAFV +K +A++
Sbjct: 4 RSGISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEE 63
Query: 73 AV-----DRLDGLFLNFNFVHEILKSS 94
A+ RLDG + F E KS+
Sbjct: 64 ALRNLDGSRLDGREITVVFAQEKRKST 90
>gi|255090217|gb|ACU00434.1| RNA binding protein [Schistosoma japonicum]
Length = 70
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+ ++TT DDL +F ++G+V D++IPRD T +SRGFAFVRY
Sbjct: 4 PPRIYGMVSLKVDNLVYKTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDR 63
Query: 69 EAQKAV 74
EA A+
Sbjct: 64 EADCAI 69
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SLLV NI+ R +D+ FE+YG+V DV+IP+D T + +GFAFV ++ EA+
Sbjct: 4 RGGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAED 63
Query: 73 AVDRLDGLFLN-----FNFVHEILKSSLFLRK 99
A LDG+ ++ F E KS+ +R+
Sbjct: 64 ARRNLDGVRIDGRDIRVVFAQERRKSTDQMRE 95
>gi|345568773|gb|EGX51665.1| hypothetical protein AOL_s00054g64 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DL +FE++G+V VF+ +DR TG ++GFAFV Y+ +AQ+A
Sbjct: 202 DLATLRVTNLSEFAEEQDLRDMFERFGRVTRVFLAKDRDTGRAKGFAFVSYQDRLDAQRA 261
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F + H ILK
Sbjct: 262 CEKMDG----FGYGHLILK 276
>gi|452979604|gb|EME79366.1| hypothetical protein MYCFIDRAFT_212200 [Pseudocercospora fijiensis
CIRAD86]
Length = 294
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DL +FE+YG+V VF+ +DR TG ++GFAFV Y +A +A
Sbjct: 211 DLATLRVTNVSEFAEEGDLRDMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARA 270
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG + F H ILK
Sbjct: 271 CEKMDG----YGFGHLILK 285
>gi|116196004|ref|XP_001223814.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
gi|121937877|sp|Q2H0U6.1|EIF3G_CHAGB RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|88180513|gb|EAQ87981.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
Length = 303
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
GK G D D +L V N++ +L +FE++G+V VF+ +DR TG ++GFAF+ Y
Sbjct: 214 GKYGERD--DLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGMAKGFAFISY 271
Query: 65 KYADEAQKAVDRLDGLFLNFNFVHEILK 92
D+A KA +++DG F F H IL+
Sbjct: 272 ADRDDAVKACNKMDG----FGFRHLILR 295
>gi|307106841|gb|EFN55086.1| hypothetical protein CHLNCDRAFT_24218 [Chlorella variabilis]
Length = 91
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
RD S+ V N++ T DDL LF +G + +F+ +DR TG+SRGFAF+ + + ++A +
Sbjct: 5 RDENSVRVSNLSEDVTEDDLADLFGPFGPIQRIFVAKDRETGESRGFAFINFIHREDALR 64
Query: 73 AVDRLDGLFLNFNFVHEILKSSL 95
A+ +LDG F + + IL S+
Sbjct: 65 AISKLDG----FGYDNLILSVSM 83
>gi|348677474|gb|EGZ17291.1| hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae]
Length = 330
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ T DDL LF +G V V++ +DR T SRGFAFV + Y ++A+KA
Sbjct: 216 DSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFVYREDAEKA 275
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++L G + + H ILK
Sbjct: 276 LNKLQG----YGYDHLILK 290
>gi|330937139|ref|XP_003305556.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
gi|311317390|gb|EFQ86366.1| hypothetical protein PTT_18431 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 202 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 261
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 262 CEKMDG----FGFGHLILR 276
>gi|451851414|gb|EMD64712.1| hypothetical protein COCSADRAFT_25710 [Cochliobolus sativus ND90Pr]
Length = 282
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 260
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 261 CEKMDG----FGFGHLILR 275
>gi|451995810|gb|EMD88278.1| hypothetical protein COCHEDRAFT_1197317 [Cochliobolus
heterostrophus C5]
Length = 282
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 260
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 261 CEKMDG----FGFGHLILR 275
>gi|396458891|ref|XP_003834058.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
gi|312210607|emb|CBX90693.1| similar to eukaryotic translation initiation factor 3 subunit G
[Leptosphaeria maculans JN3]
Length = 282
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 201 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKA 260
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 261 CEKMDG----FGFGHLILR 275
>gi|189210555|ref|XP_001941609.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977702|gb|EDU44328.1| translation initiation factor eIF3g [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 283
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 202 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRSDAAKA 261
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 262 CEKMDG----FGFGHLILR 276
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
G PD+ + +S+ V NI T +DL F+++G++ D+++PR R T D RG+AFVR+
Sbjct: 4 GGRPDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFIN 63
Query: 67 ADEAQKAVDRLDGLFLNFNFVH 88
+A+ A+ +DG LN V+
Sbjct: 64 ERDAEDAIKHMDGQQLNGKEVY 85
>gi|452819344|gb|EME26405.1| translation initiation factor eIF-3 subunit 4 [Galdieria
sulphuraria]
Length = 290
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 2 SHFGKSGPPDIR--------------DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFI 47
++ GK PP +R D+ ++ V N++ TT DL LF +G + +FI
Sbjct: 176 ANTGKYVPPHLRGGGRVSSDSSYTRDDSATVRVSNLSPNTTESDLQELFHPFGNIRRIFI 235
Query: 48 PRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGLFLNFNFVHEILKSSL 95
+DR TG+ +GFAFV + ++A+K +++LDG + + H IL+
Sbjct: 236 SKDRHTGEGKGFAFVAFSNREDARKCIEKLDG----YGYDHLILRCEW 279
>gi|169618950|ref|XP_001802888.1| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
gi|224488071|sp|Q0U6E7.2|EIF3G_PHANO RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|160703713|gb|EAT79965.2| hypothetical protein SNOG_12667 [Phaeosphaeria nodorum SN15]
Length = 281
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D+ +L V N++ DL +F +YG V VF+ +DR TG ++GFAFV Y +A KA
Sbjct: 200 DSATLRVTNVSEFAEEQDLRDMFSRYGHVTRVFLAKDRETGRAKGFAFVSYADRTDAAKA 259
Query: 74 VDRLDGLFLNFNFVHEILK 92
+++DG F F H IL+
Sbjct: 260 CEKMDG----FGFGHLILR 274
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N++ DDL LF+++G+V VFI RDR TG +G+AFV ++ D AQ+A
Sbjct: 210 DMPTLRVTNLSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFVSFEDRDSAQRA 269
Query: 74 VDRLDGL 80
+DR+ G+
Sbjct: 270 LDRVHGM 276
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G DI DT L V N+++ T D L LF ++G +V++ +P D+ + + GFAFV +
Sbjct: 397 GDEADEDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTF 456
Query: 65 KYADEAQKAVDRLDGLFLNFNFVH 88
AD A KA+ +LDG +H
Sbjct: 457 MMADHAIKAMSKLDGSIFEGRILH 480
Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V NI F T +L LF +G + + +P+ + TG RGFAF+ + +A++A L
Sbjct: 794 MVVRNIPFEATVKELQELFSTFGHIKSLRLPK-KITGTHRGFAFIDFTTKQDAKRAFKAL 852
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+TFRT DD+ +F +G V DV++P D T RGFAFV + +A A DR
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 77 LDGLFLN 83
LDG L+
Sbjct: 94 LDGYNLD 100
>gi|242076828|ref|XP_002448350.1| hypothetical protein SORBIDRAFT_06g025590 [Sorghum bicolor]
gi|241939533|gb|EES12678.1| hypothetical protein SORBIDRAFT_06g025590 [Sorghum bicolor]
Length = 217
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D S+ V N++ T+ DLF LF K+G V F+ +DRRTG SRGF FV + + ++ ++A
Sbjct: 135 DENSIRVNNLSEDTSEFDLFELFSKFGPVNRAFVAKDRRTGSSRGFGFVNFVHREDGERA 194
Query: 74 VDRLDGLFLNFNFVHEILKSSLFLRKN 100
+ +L+G + + + IL+ +KN
Sbjct: 195 ISKLNG----YGYDNLILRVEWSEKKN 217
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 2 SHFGKSGPPDIRDTY-SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
S G GP RD Y +L V N++ T DDL LF ++G+V VFI RDR T S+GFA
Sbjct: 194 SGAGPGGPS--RDEYPTLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFA 251
Query: 61 FVRYKYADEAQKAVDRLDGL 80
FV ++ +A+KA+++++G+
Sbjct: 252 FVSFELRSDAEKALEKVNGM 271
>gi|412991371|emb|CCO16216.1| RNA-binding motif protein, X-linked 2 [Bathycoccus prasinos]
Length = 336
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V I T D+ + +YG++VDVF+PRD +TG S+GFAFV Y AVD L
Sbjct: 100 VFVGGIHSELTEGDVLAILSQYGEIVDVFVPRDEKTGKSKGFAFVCYLDQRSTIIAVDNL 159
Query: 78 DG 79
+G
Sbjct: 160 NG 161
>gi|313231584|emb|CBY08698.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++ T DD+ LF K+GK+ + + RDRRT +SRGFAF+ + + D+AQ+A+D
Sbjct: 182 AIRVSNLSPAATQDDVQTLFAKFGKIARIHLGRDRRTNESRGFAFINFHHRDDAQRAIDT 241
Query: 77 L-----DGLFLNFNF 86
+ D L L+ +
Sbjct: 242 MNRYGYDNLILSVEW 256
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF F++Y +A +A
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 97
Query: 77 LDGLFL 82
+DG L
Sbjct: 98 MDGSHL 103
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R+ S+ V N++ T DDL LF +G + ++I DR TG+SRGFAFV + + ++A +
Sbjct: 199 REENSVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAAR 258
Query: 73 AVDRLDG-----LFLNFNFV 87
AV +LDG L L F
Sbjct: 259 AVQKLDGHGYDNLILRVEFA 278
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGLFL 82
+DG L
Sbjct: 97 MDGYLL 102
>gi|412993042|emb|CCO16575.1| predicted protein [Bathycoccus prasinos]
Length = 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R+ S+ V N++ T DL LF +G V +++ +R TG+SRGFAFV + D+ Q+
Sbjct: 210 REENSVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFNRETGESRGFAFVNFVNRDDGQR 269
Query: 73 AVDRLDGLFLNFNFVHEILK 92
A+DRLDG F + + IL+
Sbjct: 270 AIDRLDG----FGYDNLILR 285
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D V+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDT-------------VYIPRDRYTKESRGFAFVRFHDKR 53
Query: 69 EAQKAVDRLDGLFLN 83
+A+ A+D +DG L+
Sbjct: 54 DAEDAMDAMDGAVLD 68
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI +DL FE++G V DV++P++ TG+ RGF FV+++ A++A +A L
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHL 105
Query: 78 D-----GLFLNFNFVHEILKSSLFLRKN 100
+ G + F E K+ +R N
Sbjct: 106 NHSVIGGREIAIVFAEENRKTPQEMRTN 133
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ RTT D L F K+G+V+ + DR TG S+GF FVRY ++A K ++ +
Sbjct: 50 LFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGM 109
Query: 78 DGLFLN 83
DG FL+
Sbjct: 110 DGKFLD 115
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ +T L + N+ + T DDL LFE +GK+ +++IP DR + S+G AF+ + + A
Sbjct: 321 DVGETGRLFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSKKSKGIAFLLFMIPENA 380
Query: 71 QKAVDRLDGLFLNFNFVH 88
+A+ +DG + VH
Sbjct: 381 MRAMTEMDGKAIQGRLVH 398
Score = 41.2 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
V NI F + ++ LF YG++ V IP+ + TG RGF FV+Y EA+ A+D L
Sbjct: 781 VKNIPFEASPAEVRKLFATYGELQSVRIPK-KPTGGHRGFGFVQYLTEQEAKNAMDAL 837
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G + D+++PRD TG+ RGF FV+Y +A +A
Sbjct: 43 SLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHH 102
Query: 77 LDGLFL 82
+DG L
Sbjct: 103 MDGRVL 108
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL N++ TTADDL E++G + D+++P+D TGD RG FV + +A++A
Sbjct: 30 SLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHS 89
Query: 77 LDGLFL 82
LDG L
Sbjct: 90 LDGSTL 95
>gi|187282153|ref|NP_001119768.1| transformer-2 protein homolog alpha [Rattus norvegicus]
gi|149033412|gb|EDL88213.1| similar to RIKEN cDNA G430041M01 (predicted) [Rattus norvegicus]
Length = 235
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 164 YFERIDDSKEAMERANGMELD 184
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY---KYADE 69
R SLLV NI+ R +D+ FE+YG+V DV+IP+D T + +GFAFV + + AD+
Sbjct: 229 RGGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADD 288
Query: 70 AQKAVD--RLDGLFLNFNFVHEILKSS 94
A++ +D R+DG + F E KS+
Sbjct: 289 ARRNLDGVRIDGRDIRVVFAQERRKST 315
>gi|168011149|ref|XP_001758266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690722|gb|EDQ77088.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 407
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 90 ILKSSLFLRKNLYLCIGFL------FFFLIFFILGRVVDGREITVQFAKYGPNAEKIQQG 143
++ SS + L + I +L + FL I+GR VDGR I VQ AKYG N E I +G
Sbjct: 112 VILSSTLMELALMISIHYLTAMARWWTFLFPEIVGRAVDGRNIVVQSAKYGRNDEPIHRG 171
Query: 144 RIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSR-----SRSRERYDRDRYRSKERDH 198
RI +++ K KG R + R + R + S SR+R +R+ YR +RD
Sbjct: 172 RITDTTVK-KGNRSRSHSPRRSSRDRRYRQDDRHMKDTHHHSHSRDRNERESYRGGDRDD 230
Query: 199 RRR 201
R R
Sbjct: 231 RYR 233
>gi|198435962|ref|XP_002131898.1| PREDICTED: similar to peptidylprolyl isomerase-like 4 [Ciona
intestinalis]
Length = 522
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD L V + TT +DL +F ++G ++ I RD +TGDS +AFV ++ D
Sbjct: 237 PPD----NVLFVCKLNAVTTDEDLEIIFSRFGTIISCEIIRDYKTGDSLQYAFVEFETPD 292
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFF--FLIFFILGRVVDGREI 126
+KA ++D + ++ +H S + L F F + + I
Sbjct: 293 MCEKAYQKMDNVLIDDRRIHVDFSQS----------VSKLNFPRFNATKKSNEEISNKSI 342
Query: 127 TVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERY 186
Q P+ + ++ R V + R PR R D RRR R S
Sbjct: 343 RRQKTPDSPDQKYKRRHRDVTPPVRHNQNRRDVPPRNRPNDH----SLRRRHREESPVSR 398
Query: 187 DRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRS 228
DRD + RD R R PD H N RG+Y SRS
Sbjct: 399 DRDVSHRRHRDVEDRRHQR---PDSHSN-SRGRYPSSNNSRS 436
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL FE++G V DV++P++ TG+ RGF FV++++A++A +A +L
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
Query: 78 D-----GLFLNFNFVHEILKSSLFLR 98
+ G + F E K+ +R
Sbjct: 112 NHTVIGGREIRIVFAEENRKTPQEMR 137
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP D L V ++ F T DDL +F+ +G + V + RD+ TG S+G+AFV++K
Sbjct: 425 GPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNM 484
Query: 68 DEAQKAVDRLDGLFL 82
+A+ A+++++G L
Sbjct: 485 HDAKNAMEKMNGFQL 499
>gi|57530708|ref|NP_001006360.1| transformer-2 protein homolog alpha [Gallus gallus]
gi|53127932|emb|CAG31257.1| hypothetical protein RCJMB04_4g4 [Gallus gallus]
Length = 277
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 110 HTGSRANPDPNTC--LGVFGLSLYTTERDLCEVFSRYGPLTGVNVVYDQRTGRSRGFAFV 167
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++ +G+ L+
Sbjct: 168 YFERIDDSKEAMEHANGMELD 188
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+R L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ + AD
Sbjct: 258 PSDMRGPMRLYVGSLHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSAD 317
Query: 69 EAQKAVDRLDGLFL 82
+A+KA+++L+G L
Sbjct: 318 DAKKALEQLNGFEL 331
>gi|74152700|dbj|BAE42623.1| unnamed protein product [Mus musculus]
Length = 212
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 164 YFERIDDSKEAMERANGMELD 184
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 44/70 (62%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + ++ T D+ +F +YG+VV++ + RD++TG S+G+ F+ Y+
Sbjct: 33 KDSAWIFIGGLDYQLTEGDVICVFSQYGEVVNINLIRDKKTGKSKGYCFLCYEDQRSTVL 92
Query: 73 AVDRLDGLFL 82
+VD L+G+ L
Sbjct: 93 SVDNLNGISL 102
>gi|50582744|gb|AAT78814.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708537|gb|ABF96332.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|215692981|dbj|BAG88401.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 19/105 (18%)
Query: 141 QQGRIVESSSKSKGRSRSRSPRPR---------YRDEHRDKDY------RRRSRSRSRER 185
+GRIVE SK +GRSRS SP+ R YRD++RD+ Y R RSRS ER
Sbjct: 81 HKGRIVEEISKPRGRSRSPSPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIER 140
Query: 186 YDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRS 230
Y+R+RY +E+ +RR RSRS SPD + H + +ER RSRS
Sbjct: 141 YERERY--QEKGYRR--RSRSISPDYDRRHRKNGPRDERSPRSRS 181
>gi|51701959|sp|Q6PFR5.1|TRA2A_MOUSE RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|34785414|gb|AAH57448.1| Transformer 2 alpha homolog (Drosophila) [Mus musculus]
Length = 281
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 164 YFERIDDSKEAMERANGMELD 184
>gi|111160869|ref|NP_932770.2| transformer-2 protein homolog alpha [Mus musculus]
gi|171846642|gb|AAI61978.1| Tra2a protein [Rattus norvegicus]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 164 YFERIDDSKEAMERANGMELD 184
>gi|148666184|gb|EDK98600.1| RIKEN cDNA G430041M01, isoform CRA_a [Mus musculus]
Length = 281
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 164 YFERIDDSKEAMERANGMELD 184
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY--KY-ADEAQKA 73
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + Y A EAQ
Sbjct: 38 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYH 97
Query: 74 VDR 76
++R
Sbjct: 98 MNR 100
>gi|148666187|gb|EDK98603.1| RIKEN cDNA G430041M01, isoform CRA_d [Mus musculus]
Length = 302
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 126 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 183
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 184 YFERIDDSKEAMERANGMELD 204
>gi|148666186|gb|EDK98602.1| RIKEN cDNA G430041M01, isoform CRA_c [Mus musculus]
Length = 300
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 126 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 183
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++R +G+ L+
Sbjct: 184 YFERIDDSKEAMERANGMELD 204
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + VD
Sbjct: 62 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEF---------VDP 112
Query: 77 LDGLFLNFNFVHEIL 91
D ++ +++
Sbjct: 113 YDASEAQYHMNRQVV 127
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY--KY-ADEAQKA 73
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + Y A EAQ
Sbjct: 77 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYH 136
Query: 74 VDR 76
++R
Sbjct: 137 MNR 139
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 77 -----LDGLFLNFNFVHEILKSSLFLRKNLY 102
LDG+ +N F E KS +R Y
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHREY 104
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K+++GR V
Sbjct: 84 QFAQGDRKTPNQMKVKEGRNV 104
>gi|326921889|ref|XP_003207186.1| PREDICTED: transformer-2 protein homolog alpha-like [Meleagris
gallopavo]
Length = 277
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 110 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 167
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++ +G+ L+
Sbjct: 168 YFERIDDSKEAMEHANGMELD 188
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 77 -----LDGLFLNFNFVHEILKSSLFLRKNLY 102
LDG+ +N F E KS +R Y
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHREY 104
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL+V N+ +DL FEKYG++ DV+IPRD T RGF F+ +K +A+ A+
Sbjct: 52 SLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYN 111
Query: 77 LDGLFLN 83
LD +N
Sbjct: 112 LDRSVVN 118
>gi|449492584|ref|XP_002192791.2| PREDICTED: transformer-2 protein homolog alpha [Taeniopygia
guttata]
Length = 275
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++ +G+ L+
Sbjct: 166 YFERIDDSKEAMEHANGMELD 186
>gi|449270976|gb|EMC81612.1| Transformer-2 like protein alpha, partial [Columba livia]
Length = 264
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 98 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 155
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++ +G+ L+
Sbjct: 156 YFERIDDSKEAMEHANGMELD 176
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T SLLV N+ + TT + L FEK+G + DV+IP + T RGF FV + +A A+
Sbjct: 34 TMSLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHDFRDANMAL 93
Query: 75 DRLDGLFLNFNFVH 88
+DG L+ N +
Sbjct: 94 REMDGGELDGNKIE 107
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 87
Query: 77 -----LDGLFLNFNFVHEILKSSLFLRKNLY 102
LDG+ +N F E KS +R Y
Sbjct: 88 MDGATLDGVTINVTFAQEGRKSPESMRHREY 118
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T+ D + LF +YG++ DV++P D T RGF FV + ++A +A+
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 77 LDGLFLNFNFVH 88
+DG ++ N V
Sbjct: 74 MDGEEIDGNKVE 85
>gi|327274869|ref|XP_003222198.1| PREDICTED: transformer-2 protein homolog alpha-like [Anolis
carolinensis]
Length = 279
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
++ D++++A++ +G+ L+
Sbjct: 164 YFERIDDSKEAMEHANGMELD 184
>gi|339258866|ref|XP_003369619.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
gi|316966115|gb|EFV50740.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
Length = 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H+ + PPD L V + TT DDL +F ++G ++ + RDR+TGDS +AF+
Sbjct: 231 HYAEEKPPD----NVLFVCKLNAVTTEDDLEVIFGRFGPILSCEVIRDRKTGDSLQYAFI 286
Query: 63 RYKYADEAQKAVDRLDGLFLN 83
+ A + A ++D + ++
Sbjct: 287 EFADAKHCENAYFKMDNVLID 307
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 371 LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQL 430
Query: 78 DGLFL 82
+G L
Sbjct: 431 NGFEL 435
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 396
Query: 78 DGLFL 82
+G L
Sbjct: 397 NGFEL 401
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 D 78
+
Sbjct: 123 N 123
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 D 78
+
Sbjct: 123 N 123
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 D 78
+
Sbjct: 123 N 123
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDLKTPNQMKAKEGRNV 104
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY--KY-ADEAQKA 73
SLLV NI +DL FE++G V DV++P+D +G+ RGFAFV + Y A EAQ
Sbjct: 38 SLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 97
Query: 74 VDR 76
++R
Sbjct: 98 MNR 100
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y L V +I R +DL F++YG + DV++ R+ GFAFV Y Y ++A KAV
Sbjct: 12 YRLFVGDIGTRVGKNDLEREFDRYGPITDVWVARN-----PPGFAFVVYMYREDADKAVR 66
Query: 76 RLDGLFL 82
LDG +
Sbjct: 67 SLDGRLM 73
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 333 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 392
Query: 78 DGLFL 82
+G L
Sbjct: 393 NGFEL 397
>gi|424513420|emb|CCO66042.1| unnamed protein product [Bathycoccus prasinos]
Length = 479
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD SL V + TT +DL +F ++GKV + RDRRTGDS +AF+ ++ +
Sbjct: 254 PPD----ESLFVCKLNPVTTDEDLEIIFSRFGKVTSCDVIRDRRTGDSLCYAFINFETKE 309
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLF-LRKNL 101
+ A ++D ++ +H S+ L KN
Sbjct: 310 MCEAAYFKMDNALIDDRRIHVDFSQSMHGLWKNF 343
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 355 LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 414
Query: 78 DGLFL 82
+G L
Sbjct: 415 NGFEL 419
>gi|414869212|tpg|DAA47769.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 206
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 107 FLFFFLIFFI-LGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 151
LF ++ F+ GR VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 17 LLFLIIVDFLGAGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 62
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQIKAKEGRNV 104
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 46/139 (33%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGR 144
QFA+ PN K ++GR
Sbjct: 84 QFAQGDRKTPNQMKAKEGR 102
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 351 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 410
Query: 78 DGLFL 82
+G L
Sbjct: 411 NGFEL 415
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
L V ++ F T D+ +FE +G++ V + RD TG S+G+AFV+YK A++A+ A+
Sbjct: 353 AMQLYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMAL 412
Query: 75 DRLDGLFL 82
+++DG L
Sbjct: 413 EQMDGFEL 420
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ Y AD+A+KA+++L
Sbjct: 342 LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 401
Query: 78 DGLFL 82
+G L
Sbjct: 402 NGFEL 406
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK CI GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK----CIC----------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ + AD+A+KA+++L
Sbjct: 305 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQL 364
Query: 78 DGLFL 82
+G L
Sbjct: 365 NGFEL 369
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 153 KGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRS---KERDHRRRS-RSRSAS 208
K + RSRSPRP RD+ R+KD RR+S+ RS+ R R R RS KE+DHR ++ RS
Sbjct: 79 KDKDRSRSPRP--RDKEREKD-RRKSKERSKSRSPR-RERSKDHKEKDHRSKNDHHRSVE 134
Query: 209 PDRHKNHGRGKYDEERR 225
R + G G D R+
Sbjct: 135 KRRSRERGGGMIDHRRK 151
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 42/131 (32%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAK---Y 133
LD RK ++C GR+I +QFA+
Sbjct: 71 LD-------------------RK--WIC------------------GRQIEIQFAQGDRK 91
Query: 134 GPNAEKIQQGR 144
PN K ++GR
Sbjct: 92 TPNQMKAKEGR 102
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F +G + + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYGPNA 137
D + ++ +H S+ + + GR V G + F N
Sbjct: 302 DNVLIDDRRIHVDFSQSVSK--------------VTWRGKGRGVVGDYGKLDFDNLRDNK 347
Query: 138 EKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSK-ER 196
++ + GRSR R ++++ R +D R R S R + R++ + ER
Sbjct: 348 DR---------RKPNNGRSR----REDHKEDKRAEDPRHRMSSAERRKAREQRHQEQSER 394
Query: 197 DHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYESAS 235
D R+ R RS S ++ E+ RSRSR++++ S
Sbjct: 395 DDRKNVRGRSRSREKQ---------EQNRSRSRNWQNGS 424
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ + AD+A+KA+++L
Sbjct: 291 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQL 350
Query: 78 DGLFL 82
+G L
Sbjct: 351 NGFEL 355
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++P+D TG+ RGF FV+Y +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 77 LDGLFL 82
+DG L
Sbjct: 102 MDGQVL 107
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T + L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 250 GQTGP------MRLYVGSLLFNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTF 303
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 304 RNADDAKKALEQLNGFEL 321
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 240 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 293
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 294 RNADDAKKALEQLNGFEL 311
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V + ++ DL FE+YGKV D++IP+ G RGFA+V++ ++A+ A+++
Sbjct: 5 SIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEK 64
Query: 77 LD-----GLFLNFNFVHEILKSSLFLRK 99
+ G LN + K+S +R+
Sbjct: 65 IPSIVILGQTLNVEWATGERKTSNDMRR 92
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK---YADEAQKA 73
SL V NI D+L F +YG + DV+IPRD RGFA+V++ A++AQ+
Sbjct: 12 SLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEG 71
Query: 74 VD--RLDGLFLNFNFVHEILKSSLFLR 98
+D ++ G F++ F KS +R
Sbjct: 72 MDGRKVCGRFIDVQFAKGDRKSPGSMR 98
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 266 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 319
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 320 RNADDAKKALEQLNGFEL 337
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 264 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 317
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 318 RNADDAKKALEQLNGFEL 335
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 262 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 315
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 316 RNADDAKKALEQLNGFEL 333
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 241 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 294
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 295 RNADDAKKALEQLNGFEL 312
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 242 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 295
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 296 RNADDAKKALEQLNGFEL 313
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 242 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 295
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 296 RNADDAKKALEQLNGFEL 313
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 240 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTF 293
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 294 RNADDAKKALEQLNGFEL 311
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G++GP L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ +
Sbjct: 254 GQTGP------MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTF 307
Query: 65 KYADEAQKAVDRLDGLFL 82
+ AD+A+KA+++L+G L
Sbjct: 308 RNADDAKKALEQLNGFEL 325
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A LD RK ++C GR+I +
Sbjct: 63 DAEDAFHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKAKEGRNV 104
>gi|350407880|ref|XP_003488226.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Bombus
impatiens]
Length = 502
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RDR+TGDS +AF+ + ++A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDRQTGDSLQYAFIEFADRKSCEEAYFKM 301
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYGPNA 137
D + ++ +H S+ + G+ VQ+ + A
Sbjct: 302 DNVLIDDRRIHVDFSQSVAKMR---------------------WKGKGKGVQY--FDDEA 338
Query: 138 EKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERD 197
+++ + + SK K R RS +R R KD +++ S Y+RD+Y KE+
Sbjct: 339 DEVGNENLEKVISKHKQRDEPRSKEIEHRKYERIKD-ANKAKVYS---YNRDKYIEKEKY 394
Query: 198 HRRRSRSRS 206
+R R S
Sbjct: 395 KVQRHRDSS 403
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G SGP L V ++ F T + L +FE +GK+ ++ + +D TG S+G+ F+ +
Sbjct: 251 GNSGP------MRLYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITF 304
Query: 65 KYADEAQKAVDRLDGLFL 82
A++A+KA+++L+G L
Sbjct: 305 HDAEDAKKALEQLNGFEL 322
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V NI+ + +DL F +YG +VDV+IP D T RGFA+++++ +A+ A+
Sbjct: 11 SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALHS 70
Query: 77 LDGLFL 82
LD ++
Sbjct: 71 LDRKWV 76
>gi|194909374|ref|XP_001981933.1| GG12319 [Drosophila erecta]
gi|190656571|gb|EDV53803.1| GG12319 [Drosophila erecta]
Length = 654
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F +G + + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSSFGMLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYGPNA 137
D + ++ +H S+ + + GR V G + F N
Sbjct: 302 DNVLIDDRRIHVDFSQSVSK--------------VTWRGKGRGVVGDYGKLDFDNLRDNK 347
Query: 138 E--KIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRD----RY 191
+ K GR + + R+ PR R R K +R + +S ER DR R
Sbjct: 348 DHRKSNDGR--SRTEDHREPKRADDPRNRMSSAERKKAREQRHQEQS-ERDDRKNVRRRT 404
Query: 192 RSKERDHRRRSRSRSA-SPDRHKNHGRGKYDEERRSRSR 229
RS+E+ + RSRSR+ + KN R + ER SRSR
Sbjct: 405 RSREKQEQNRSRSRNWPNGSARKNSDRERIRNERSSRSR 443
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 177 RSRSRSRERYDRDRYRSKERDHRRRSRSRSAS---PDRHKNHGRGKYDEERRSRSRSYES 233
R RSRSR++ +R R R +E++ RRRSRSR + P ++++H + + + R R+ +S
Sbjct: 470 RERSRSRDQKERRRSRPREQNERRRSRSRDQTEKRPPQNRDHNKSRRFNSPQERRRTEDS 529
Query: 234 ASPPRHSP-NSKRSPSPRKTHKGEINPDERSPALKRVSPDGRRSVS 278
R + N KRSP R+ + +N + + + SP+ +R +S
Sbjct: 530 GGSHRDTLRNQKRSPERRQQSRDRVNHRVDTHSSRNKSPEKKRKLS 575
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 9 PPDIRDT----YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
PP + T L V ++ F+ T +++ +FE +G++ V + RD TG S+G+ F++Y
Sbjct: 294 PPGVTATSHGPMQLYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQY 353
Query: 65 KYADEAQKAVDRLDGLFLN-----FNFVHE 89
+ ++A+ A++++DG L N VHE
Sbjct: 354 RRPEDAKMALEQMDGFELAGRQLRVNTVHE 383
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTG------------DSRGFAFVRY 64
SLLV N+ +DL FE++G V D+++PRD TG D RGF FV++
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQF 96
Query: 65 KYADEAQKAVDRLDGLFL 82
+A A +DG L
Sbjct: 97 MDPADAADAKHHMDGYLL 114
>gi|158297018|ref|XP_317325.4| AGAP008136-PA [Anopheles gambiae str. PEST]
gi|157014993|gb|EAA12690.4| AGAP008136-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK+V + RD+ TGDS +AF+ ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKLTGDSLQYAFIEFENQKSCEDAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|15292733|gb|AAK92735.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
Length = 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ R T DL F K GKV DV + D T +SRGF F+ K +A + +
Sbjct: 46 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRS 105
Query: 77 LDGLFLNFNFV 87
LD L +
Sbjct: 106 LDHSVLQGRVI 116
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 46/141 (32%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T DL F +YG VVDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 63 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 83
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 84 QFAQGDRKTPNQMKGKEGRNV 104
>gi|42561780|ref|NP_563787.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|28973767|gb|AAO64199.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
gi|332189991|gb|AEE28112.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ R T DL F K GKV DV + D T +SRGF F+ K +A + +
Sbjct: 76 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRS 135
Query: 77 LDGLFLNFNFV 87
LD L +
Sbjct: 136 LDHSVLQGRVI 146
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P ++ L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ ++ +
Sbjct: 255 PKNMTGPMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCE 314
Query: 69 EAQKAVDRLDGLFL 82
+A+KA+++L+G L
Sbjct: 315 DAKKALEQLNGFEL 328
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF------ 61
GP D L V ++ F T DDL +F+ +G + V + RD+ TG S+G+AF
Sbjct: 425 GPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFTLLTCV 484
Query: 62 -VRYKYADEAQKAVDRLDGLFL 82
+R+K +A+ A+++++G L
Sbjct: 485 NIRFKNMHDAKNAMEKMNGFQL 506
>gi|328791237|ref|XP_001121334.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Apis
mellifera]
Length = 507
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RDR+TGDS +AF+ + ++A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGDSLQYAFIEFADRKSCEEAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VDV+IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLD 78
+A+ A+ LD
Sbjct: 63 DAEDALHSLD 72
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 14 DTYSLLVLN-ITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
D Y L + + + T DDL E YGKV V + RD+ +G RG+AFV +++ + +
Sbjct: 102 DAYKTLFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRA 161
Query: 73 AVDRLDGLFLN 83
A DG+ LN
Sbjct: 162 AYRYADGMRLN 172
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P ++ L V ++ F T D L +FE +GK+ ++ + D TG S+G+ F+ ++ +
Sbjct: 234 PKNMTGPMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCE 293
Query: 69 EAQKAVDRLDGLFL 82
+A+KA+++L+G L
Sbjct: 294 DAKKALEQLNGFEL 307
>gi|194696838|gb|ACF82503.1| unknown [Zea mays]
gi|219888871|gb|ACL54810.1| unknown [Zea mays]
gi|413922157|gb|AFW62089.1| arginine/serine-rich splicing factor 10 isoform 1 [Zea mays]
gi|413922158|gb|AFW62090.1| arginine/serine-rich splicing factor 10 isoform 2 [Zea mays]
gi|413922159|gb|AFW62091.1| arginine/serine-rich splicing factor 10 isoform 3 [Zea mays]
Length = 295
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DDL F K GKV + + D RT +SRGFAFV + A++++
Sbjct: 87 NLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARRSIKY 146
Query: 77 LDGLFLNFNFV 87
L L V
Sbjct: 147 LHRTVLEGRLV 157
>gi|226506692|ref|NP_001148693.1| LOC100282309 [Zea mays]
gi|195621452|gb|ACG32556.1| arginine/serine-rich splicing factor 10 [Zea mays]
Length = 295
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DDL F K GKV + + D RT +SRGFAFV + A++++
Sbjct: 87 NLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARRSIKY 146
Query: 77 LDGLFLNFNFV 87
L L V
Sbjct: 147 LHRTVLEGRLV 157
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ + + D TG S+G+ F+ + +A +A+KA+++L
Sbjct: 282 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQL 341
Query: 78 DGLFL 82
+G L
Sbjct: 342 NGFEL 346
>gi|195158659|ref|XP_002020203.1| GL13859 [Drosophila persimilis]
gi|194116972|gb|EDW39015.1| GL13859 [Drosophila persimilis]
Length = 615
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F +G + D+++P+D TG RGF F+++ +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYH 101
Query: 77 LDGLFL 82
+DG L
Sbjct: 102 MDGQVL 107
>gi|403168962|ref|XP_003328523.2| peptidylprolyl isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167741|gb|EFP84104.2| peptidylprolyl isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 437
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T ++DL +F ++G ++ + +D +TGDS +AF+
Sbjct: 241 FAEVAPPE----NILFVCKLNSITRSEDLELIFSRFGTILSCEVIKDAKTGDSLQYAFIE 296
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDG 123
+ ++A++A ++DG+ ++ +H S + L IF G+ V
Sbjct: 297 FDQREDAERAYFKMDGVLIDDRRIHVDFSQS----------VSKLHSDWIFKRTGKRV-- 344
Query: 124 REITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSR 183
PN Q+ + + S +S R+R S +Y D D RS RS
Sbjct: 345 ----------KPNQTYEQRPKKRQPSERSPPRARRDS---KYEMSFDDADLIERSARRSD 391
Query: 184 ERYDRDRYRSKERDHRRRSRSRS 206
R DR RDHR R S
Sbjct: 392 HRRHDDRRPHSSRDHRSNHRQDS 414
>gi|66801303|ref|XP_629577.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
gi|60462961|gb|EAL61158.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
Length = 489
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD + L V + T A+DL +F + G V + RD+ T DS +AFV Y +
Sbjct: 240 PPD----HVLFVCKLNPITEAEDLELVFSQCGTVKSCEVVRDKVTNDSLCYAFVEYSTKE 295
Query: 69 EAQKAVDRLDGLFLNFNFVH 88
E +KA +L+ + ++ +H
Sbjct: 296 ECEKAYLKLENILIDERRIH 315
>gi|194745953|ref|XP_001955449.1| GF18772 [Drosophila ananassae]
gi|190628486|gb|EDV44010.1| GF18772 [Drosophila ananassae]
Length = 621
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|111226498|ref|XP_001134546.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970613|gb|EAS66863.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 348
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V + + D+ +F +YG++ + + R++ TG S+GF FV Y AVD L
Sbjct: 35 IYVGGLNYDLNEGDVIAIFSQYGEISECNLVRNKETGRSQGFCFVGYDQQKSTVLAVDNL 94
Query: 78 DGLFL 82
+G+ L
Sbjct: 95 NGINL 99
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI F T +DL +FE +G++ V + +D TG SRG+ FV+++ ++A++A++++
Sbjct: 279 LYVGNIHFSITENDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKM 337
Query: 78 DGLFL 82
+G L
Sbjct: 338 NGFDL 342
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RD ++ V + R +L FEK G V + I +DR +G S+G +V +K D
Sbjct: 173 DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEDSV 232
Query: 71 QKAVDRLDGLFLNFNFVHEILKS 93
A+ L + ++ ++
Sbjct: 233 APAIQLTGQKLLGIPIIAQLTEA 255
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 6 KSGPP-DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
+S PP I + + + +I + T D + +F ++G+V+ F+ ++ TG +GF FV +
Sbjct: 758 ESAPPVPINEASRIYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDF 817
Query: 65 KYADEAQKAVDRLDGLFL 82
+ A A+ ++G L
Sbjct: 818 ELKKSADDAIATMNGFEL 835
>gi|357141252|ref|XP_003572153.1| PREDICTED: scaffold attachment factor B1-like [Brachypodium
distachyon]
Length = 275
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 11 DIRDT-YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
D+R+ +L V ++ R T +L F GKV + + D RT +SRGFAFV ++
Sbjct: 81 DLRNPGNNLYVTGLSTRVTEAELEKFFSTEGKVKNCHVVLDPRTKESRGFAFVSMDTVED 140
Query: 70 AQKAVDRLDGLFLNFNFV 87
A++ + RL L V
Sbjct: 141 ARRCIKRLHRTVLEGRLV 158
>gi|307166099|gb|EFN60351.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Camponotus floridanus]
Length = 490
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RD +TGDS +AF+ + + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|195452564|ref|XP_002073409.1| GK13166 [Drosophila willistoni]
gi|194169494|gb|EDW84395.1| GK13166 [Drosophila willistoni]
Length = 594
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + + TT DDL +F ++G V + RDR+TGDS +AFV + + A ++
Sbjct: 242 LFICKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFDEQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLVDDRRIH 312
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
SG P+ + L V NI F T DL +FE +G++ V + +D +G SRG+ FV+++
Sbjct: 278 SGHPNSVPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDD-SGRSRGYGFVQFRD 336
Query: 67 ADEAQKAVDRLDGLFL 82
A +A++A+++++G L
Sbjct: 337 AGQAREALEKMNGFDL 352
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T + L +FE +GK+ D+ + RD T S+G+ F+ + +++A+KA+++L
Sbjct: 262 LYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQL 321
Query: 78 DGLFL 82
+G L
Sbjct: 322 NGFEL 326
>gi|195037156|ref|XP_001990030.1| GH18460 [Drosophila grimshawi]
gi|193894226|gb|EDV93092.1| GH18460 [Drosophila grimshawi]
Length = 582
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL + NI+ + +DL F +YG VVDV+IP D + RGFA+++++ +A+ A+
Sbjct: 11 SLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHN 70
Query: 77 LD 78
LD
Sbjct: 71 LD 72
>gi|198449749|ref|XP_002136956.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
gi|198130740|gb|EDY67514.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAKYGPNA 137
D + ++ +H S+ + + GR V+G + + F N
Sbjct: 302 DNVLIDDRRIHVDFSQSVSK--------------VTWRGKGRGVEGVDGKLDFDNLRDNN 347
Query: 138 EKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERD 197
E+ + GR R R +RD R D R R S R R R++ ++ D
Sbjct: 348 ER---------RPHNNGRGRDRDRPDEHRDRKRPDDPRSRMSSAER-RKAREQRHQEQND 397
Query: 198 H 198
H
Sbjct: 398 H 398
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL + N+ T +DL LF KYG + DV+IP D RGFA+V+++ +A+ A+
Sbjct: 33 SLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYS 92
Query: 77 LD 78
LD
Sbjct: 93 LD 94
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V ++ F + +D+ F +G V V + +D T S+GFAFV Y Y D A A+ +
Sbjct: 253 IYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHM 312
Query: 78 DGLFL 82
+G L
Sbjct: 313 NGFML 317
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V +I + T+DD+ +FE +G V + + TG +G+ FV Y+ + A++A+ ++
Sbjct: 413 IYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQM 472
Query: 78 DGLFLN 83
+G L
Sbjct: 473 NGWDLG 478
>gi|21355677|ref|NP_651291.1| CG5808 [Drosophila melanogaster]
gi|4972682|gb|AAD34736.1| unknown [Drosophila melanogaster]
gi|7301211|gb|AAF56342.1| CG5808 [Drosophila melanogaster]
gi|220943598|gb|ACL84342.1| CG5808-PA [synthetic construct]
gi|220953568|gb|ACL89327.1| CG5808-PA [synthetic construct]
Length = 653
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F +G + + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|91089021|ref|XP_968771.1| PREDICTED: similar to CG5808 CG5808-PA [Tribolium castaneum]
gi|270011537|gb|EFA07985.1| hypothetical protein TcasGA2_TC005570 [Tribolium castaneum]
Length = 467
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T+ DDL +F ++GK+ + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKTGDSLQYAFVEFEDKKSCEDAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + NI F T D+ F +G + + + +D TG SRGF F+ Y Y + A A+ +
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQNM 664
Query: 78 D 78
+
Sbjct: 665 N 665
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T +DL +F ++G ++ + RD+RTGDS +AF+
Sbjct: 240 FAEVKPPE----NVLFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKRTGDSLQYAFIE 295
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVH 88
++ + ++A +++G+ ++ + +H
Sbjct: 296 FENQKDCEQAYFKMEGVLIDDHRIH 320
>gi|326483936|gb|EGE07946.1| peptidyl-prolyl cis-trans isomerase-like 4 [Trichophyton equinum
CBS 127.97]
Length = 454
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T +DL +F ++G+++ + RD++TGDS +AF+
Sbjct: 240 FAEVKPPE----NVLFVCKLNPVTQDEDLNLIFSRFGRILSCEVIRDKKTGDSLQYAFIE 295
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVH 88
++ + ++A ++ G+ ++ + +H
Sbjct: 296 FEDQKDCEQAYFKMQGVLIDDHRIH 320
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI F T DL +FE +G++ V + +D TG SRG+ FV+++ ++A++A++++
Sbjct: 279 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKM 337
Query: 78 DGLFL 82
+G L
Sbjct: 338 NGFDL 342
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RD ++ V + R +L FEK G V + I +DR +G S+G +V +K +
Sbjct: 173 DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESV 232
Query: 71 QKAVDRLDGLFLNFNFVHEILKS 93
A+ L + ++ ++
Sbjct: 233 APAIQLTGQKLLGIPIIAQLTEA 255
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS L+ N+ F T+ + FEK+GK+ DV++P D T RGF FV + +A AV
Sbjct: 7 YSTLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVR 66
Query: 76 RLDGLFLNFNFVHEIL 91
+D L+ + + +
Sbjct: 67 AMDNTELDGSVITCCI 82
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ ++ + ++ TG S+GF F+ + A+ A++A+++L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 308
Query: 78 DGLFL 82
+G L
Sbjct: 309 NGFEL 313
>gi|195388776|ref|XP_002053055.1| GJ23668 [Drosophila virilis]
gi|194151141|gb|EDW66575.1| GJ23668 [Drosophila virilis]
Length = 530
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++G V + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ ++ + +D TG S+GF F+ + ++ A++A+++L
Sbjct: 277 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 336
Query: 78 DGLFL 82
+G L
Sbjct: 337 NGFEL 341
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ F T D L +FE +GK+ ++ + +D TG S+GF F+ + ++ A++A+++L
Sbjct: 275 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 334
Query: 78 DGLFL 82
+G L
Sbjct: 335 NGFEL 339
>gi|348531146|ref|XP_003453071.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Oreochromis niloticus]
Length = 470
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++G + I RD +TGDS +AF+ ++ ++ +KA ++
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGCIKSCEIIRDWKTGDSLCYAFIEFEKQEDCEKAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|212546055|ref|XP_002153181.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064701|gb|EEA18796.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 369
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F PP+ L V + T +DL +F ++G ++ + RD++TGDS +AF+
Sbjct: 155 FADVKPPE----NVLFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKKTGDSLQYAFIE 210
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVH 88
++ + ++A +++G+ ++ + +H
Sbjct: 211 FENQKDCEQAYFKMEGVLIDDHRIH 235
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK-YADEAQKAVD 75
SL + N+ T +DL LF KYG + DV+IP D RGFA+V+Y + D + A D
Sbjct: 12 SLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQYPLFLDHLRDAED 71
Query: 76 RLDGL 80
+ L
Sbjct: 72 AMYSL 76
>gi|307196041|gb|EFN77766.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Harpegnathos saltator]
Length = 451
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T DDL +F ++GK++ + RD +TGDS +AF+ + ++A ++
Sbjct: 242 LFVCKLNPVTNDDDLEIIFNRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEEAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 148 SSSKSKG---RSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRS 204
S S+SKG RSRSRS R R K RSRSRS+ + DR R RSK +D R SRS
Sbjct: 305 SRSRSKGMDERSRSRSKTQDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDR--SRS 362
Query: 205 RS-ASPDRHKNHGRGKYDEERRSRSRSYESASPPRHSPNSKRSPSPRKT 252
RS A DR ++ +GK DE RSRS++ + +S R N +RS SP K+
Sbjct: 363 RSKAKDDRSRSRSKGK-DERSRSRSKAKDESSCSRSKDNRERSLSPSKS 410
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ T + L +FE +GK+ + + RD+ TG S+G+ F+ + A+ A++A+++L
Sbjct: 268 LYVGSLHCNITKEMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECARRALEQL 327
Query: 78 DGLFL 82
+G L
Sbjct: 328 NGFEL 332
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++GK+V + RD++T +S +AF+ + + A ++
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGKIVSCEVIRDKKTSNSLQYAFIEFDNKKSCEDAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|212546053|ref|XP_002153180.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064700|gb|EEA18795.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 454
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 43/71 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T +DL +F ++G ++ + RD++TGDS +AF+ ++ + ++A ++
Sbjct: 250 LFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKKTGDSLQYAFIEFENQKDCEQAYFKM 309
Query: 78 DGLFLNFNFVH 88
+G+ ++ + +H
Sbjct: 310 EGVLIDDHRIH 320
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 42/132 (31%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + ++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ L
Sbjct: 97 LRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 156
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAK---YG 134
D RK ++C GR+I +QFA+
Sbjct: 157 D-------------------RK--WIC------------------GRQIEIQFAQGDRKT 177
Query: 135 PNAEKIQQGRIV 146
PN K ++GR V
Sbjct: 178 PNQMKAKEGRNV 189
>gi|8778550|gb|AAF79558.1|AC022464_16 F22G5.31 [Arabidopsis thaliana]
Length = 415
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDV---FIPRDRRTGDSRGFAFVRYKYADEAQKA 73
SL V ++ R T DL F K GKVVDV + D T +SRGF F+ K +A +
Sbjct: 108 SLYVTGLSHRVTERDLEDHFAKEGKVVDVTDVHLVLDPWTRESRGFGFISMKSVGDANRC 167
Query: 74 VDRLDGLFLNFNFV 87
+ LD L +
Sbjct: 168 IRSLDHSVLQGRVI 181
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R + ++ V NI D+L +F +YG +V +P D +G +GFAFV+++ +A++
Sbjct: 3 RSSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEE 62
Query: 73 AVDRLDG 79
+ DRL G
Sbjct: 63 SFDRLQG 69
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
SL V NI + +DL F +YG +VDV+IP D T RGFA+++Y
Sbjct: 11 SLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQY 58
>gi|348503355|ref|XP_003439230.1| PREDICTED: ribonuclease 3-like [Oreochromis niloticus]
Length = 1347
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 53/88 (60%), Gaps = 13/88 (14%)
Query: 151 KSKGRS---RSRSPRPRYRDEHRDKDY---RRRSRSRSRERY-DRDRYRSKERD-HRRRS 202
K +GRS RSR RYR E+ D+ R RSR RSRERY RD RS+ D HR+R
Sbjct: 239 KDRGRSPDRRSRQEGGRYRSEY-DRGRTPPRHRSRDRSRERYRHRDSRRSQSPDRHRKRP 297
Query: 203 RSRSASPDRHKNHGRGKYDEERRSRSRS 230
RSRS S DR RG+++EER RS S
Sbjct: 298 RSRSTSRDR----KRGRWEEERDRRSES 321
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T DL +F ++GK+V + RD+ TGDS +AF+ ++ + A ++
Sbjct: 242 LFVCKLNPVTADSDLQIIFSRFGKIVGCEVIRDKVTGDSLQYAFIEFEDKKSCETAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI F T DL +FE +G++ V + +D G SRG+ FV+++ ++A++A++++
Sbjct: 297 LYVGNIHFSITESDLQNVFEPFGELDFVQLQKDE-NGRSRGYGFVQFRDPNQAREALEKM 355
Query: 78 DGLFL 82
+G L
Sbjct: 356 NGFDL 360
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RD ++ V + R +L FEK G V D I +DR +G S+G +V +K +
Sbjct: 190 DERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESV 249
Query: 71 QKAVDRLDGLFLNFNFVHEILKS 93
A+ L + + ++
Sbjct: 250 PVAIQLTGQKLLGIPIIAQFTEA 272
>gi|313212785|emb|CBY36708.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D L V + TT +DL +F ++G + I RDRRT S +AF+ + D+ ++A
Sbjct: 183 DKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFATDDDCERA 242
Query: 74 VDRLDGLFLNFNFVH 88
++D + ++ +H
Sbjct: 243 YFKMDNVLIDDRRIH 257
>gi|326437755|gb|EGD83325.1| hypothetical protein PTSG_12099 [Salpingoeca sp. ATCC 50818]
Length = 741
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + RT L F ++G + V I RDR+TG+SR F F+ +K D+A A D+L
Sbjct: 646 LGVFGLHDRTDEHALEECFGEFGDLDRVIIVRDRKTGESRRFGFITFKRQDDADAARDKL 705
Query: 78 DG 79
+G
Sbjct: 706 NG 707
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP + L + + T D L +FE +GK+ + I D +G S+G+A+V +++A
Sbjct: 344 GPTNTTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHA 402
Query: 68 DEAQKAVDRLDGLFL 82
D+A++A+++++G L
Sbjct: 403 DDAKRAMEQMNGFEL 417
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP + L + + T D L +FE +GK+ + I D +G S+G+A+V +++A
Sbjct: 261 GPTNTTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHA 319
Query: 68 DEAQKAVDRLDGLFL 82
D+A++A+++++G L
Sbjct: 320 DDAKRAMEQMNGFEL 334
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP + L V + T D L +F+ +GK+ ++ I D +G S+G+A+V +++A
Sbjct: 361 GPTNTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHA 419
Query: 68 DEAQKAVDRLDGLFL 82
D+ ++A+++++G L
Sbjct: 420 DDGKRAMEQMNGFEL 434
>gi|313227010|emb|CBY22157.1| unnamed protein product [Oikopleura dioica]
Length = 434
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D L V + TT +DL +F ++G + I RDRRT S +AF+ + D+ ++A
Sbjct: 243 DKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFATDDDCERA 302
Query: 74 VDRLDGLFLNFNFVH 88
++D + ++ +H
Sbjct: 303 YFKMDNVLIDDRRIH 317
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP + L V + T D L +F+ +GK+ ++ I D +G S+G+A+V +++A
Sbjct: 247 GPTNTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHA 305
Query: 68 DEAQKAVDRLDGLFL 82
D+ ++A+++++G L
Sbjct: 306 DDGKRAMEQMNGFEL 320
>gi|403374574|gb|EJY87244.1| Peptidylprolyl isomerase (Cyclophilin)-like 4 [Oxytricha trifallax]
Length = 412
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T DL +F ++G + I RD +TGDS +AF+ ++ + +A R+
Sbjct: 195 LFVCKLNPVTQDGDLRLIFSRFGPIKCCEIVRDWKTGDSLQYAFIEFENEESCIEAYSRM 254
Query: 78 DGLFLNFNFVHEILKSSLFLRKNLY 102
+G+ ++ +H S+ N Y
Sbjct: 255 EGVAIDERRIHIDFSQSVAKEWNQY 279
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + DDL +FE +G V V +PRD TG +GF FV++ ++A+ A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNA---- 341
Query: 78 DGLFLNFNFVHEI 90
LN N EI
Sbjct: 342 ----LNLNGQLEI 350
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + DDL +FE +G V V +PRD TG +GF FV++ ++A+ A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNA---- 341
Query: 78 DGLFLNFNFVHEI 90
LN N EI
Sbjct: 342 ----LNLNGQLEI 350
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + DDL +FE +G V V +PRD TG +GF FV++ ++A+ A
Sbjct: 325 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNA---- 379
Query: 78 DGLFLNFNFVHEI 90
LN N EI
Sbjct: 380 ----LNLNGQLEI 388
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + DDL +FE +G V V +PRD TG +GF FV++ ++A+ A
Sbjct: 336 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNA---- 390
Query: 78 DGLFLNFNFVHEI 90
LN N EI
Sbjct: 391 ----LNLNGQLEI 399
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H GP SL V I T D++ LF +YG V DV IP D T RGFA++
Sbjct: 48 HMSTRGP-----NTSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYI 102
Query: 63 RYKY---ADEAQKAVDR--LDGLFLNFNFVH 88
++ A+ AQK ++R L L+ +F
Sbjct: 103 EFESIEDAEYAQKKLNRTRLGDKMLHVDFAQ 133
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H GP SL V I T D++ LF +YG V DV IP D T RGFA++
Sbjct: 48 HMSTRGP-----NTSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYI 102
Query: 63 RYKY---ADEAQKAVDR--LDGLFLNFNFV 87
++ A+ AQK ++R L L+ +F
Sbjct: 103 EFESIEDAEYAQKKLNRTRLGDKMLHVDFA 132
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 47/141 (33%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RG + ++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITFEDVR 61
Query: 69 EAQKAVDRLDGLFLNFNFVHEILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITV 128
+A+ A+ LD RK ++C GR+I +
Sbjct: 62 DAEDALHNLD-------------------RK--WIC------------------GRQIEI 82
Query: 129 QFAK---YGPNAEKIQQGRIV 146
QFA+ PN K ++GR V
Sbjct: 83 QFAQGDRKTPNQMKAKEGRNV 103
>gi|414887663|tpg|DAA63677.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 158
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 128 VQFAKYGPNAEKIQQGRIVESSSKSKG 154
VQFAKYGPNAE+I +GRIVE + G
Sbjct: 2 VQFAKYGPNAERINKGRIVEPVPRPGG 28
>gi|109892837|sp|P0C1I6.1|PPIL4_RHIO9 RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|384491073|gb|EIE82269.1| peptidyl-prolyl cis-trans isomerase-like 4 [Rhizopus delemar RA
99-880]
Length = 446
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T +DL +F ++G + I RDR+TGDS +AFV
Sbjct: 234 FAEVKPPE----NVLFVCKLNPVTRDEDLEMIFSRFGLIHSCEIIRDRQTGDSLSYAFVE 289
Query: 64 YKYADEAQKAVDRLDGLFLNFNFVH 88
++ ++A++A ++ + ++ +H
Sbjct: 290 FENKEDAEEAYFKMQSVLIDDRRIH 314
>gi|255558828|ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis]
gi|223540279|gb|EEF41850.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis]
Length = 399
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F GKV+DV + D T +SRGF FV EA + + L
Sbjct: 49 LYVTGLSPRITKRDLEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMSTLVEADRCIKYL 108
Query: 78 D 78
+
Sbjct: 109 N 109
>gi|327279975|ref|XP_003224730.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Anolis
carolinensis]
Length = 478
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++G + + RD +T +S +AF+ ++ ++ +KA ++
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTSESLCYAFIEFEKEEDCEKAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLIDDRRIH 312
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I + T+ L FE YG + + + D+ TG RG+AF+ Y++ + A
Sbjct: 103 TLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKH 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
>gi|324511081|gb|ADY44625.1| Peptidyl-prolyl cis-trans isomerase-like protein 4 [Ascaris suum]
Length = 430
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++G + + RDRRTG S +AF+ ++ + A ++
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGAIKCCEVIRDRRTGASLQYAFIEFEDEKSCENAYFKM 301
Query: 78 DGLFLNFNFVH 88
D + ++ +H
Sbjct: 302 DNVLVDDRRIH 312
>gi|452820199|gb|EME27245.1| splice factor, putative isoform 2 [Galdieria sulphuraria]
Length = 422
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++ + +L LFEKYGK R RGF FV Y EA+ A++
Sbjct: 2 SLFVGNVSSSVSKRELQDLFEKYGKC---------RIDLKRGFMFVDYDEEAEAKDALES 52
Query: 77 LDG---LFLNFNFVHEILKSSLFLRK 99
L G +++ + L SLF R+
Sbjct: 53 LQGKVREWVSLLYTSVSLSGSLFYRQ 78
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + I + T+ L FE YG + + + D+ +G RG+AF+ Y++ + A
Sbjct: 233 TLFIARINYDTSESKLRREFEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERDMHAAYKH 292
Query: 77 LDG 79
DG
Sbjct: 293 ADG 295
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ + T L +FE +GK+ ++ + D S+G+ F+ + A++A++A+D+L
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQL 366
Query: 78 DGLFL 82
+G L
Sbjct: 367 NGFEL 371
>gi|325180057|emb|CCA14459.1| PREDICTED: similar to AGAP009570PA putative [Albugo laibachii Nc14]
gi|325186695|emb|CCA21243.1| PREDICTED: RNAbinding protein S1 putative [Albugo laibachii Nc14]
Length = 377
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
++ V N+T + L +F K+G V V + +R T S+G A + + +A+ A+
Sbjct: 85 IAVRVENLTRNVNTEHLTEIFAKFGSVTKVKLMTERDTKISKGSAVIEFNTDQDAENAIQ 144
Query: 76 RL-DGLFLNFNFVHEILKSSLF 96
+ DG V +++ L
Sbjct: 145 HMHDGWLDGRKIVVQLMTEDLV 166
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 33/103 (32%)
Query: 30 DDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGLFLNFNFVHE 89
+DL F +YG +VDV+IP D T RGFA+V+Y LF F V +
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP--------------LFFIFEDVRD 48
Query: 90 ILKSSLFLRKNLYLCIGFLFFFLIFFILGRVVDGREITVQFAK 132
+ +L+ ++C GR+I +QFA+
Sbjct: 49 A-EDALYNLNRKWVC------------------GRQIEIQFAQ 72
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
P+ RD +LL++ I T DL F G V DV I D RTG S+G +V +
Sbjct: 235 PEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEF 289
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ NI + + L E +GK+ + +D TG S G A Y+ +D A +AV+ L
Sbjct: 402 LIMSNIPVVLAEEQVKELVEPFGKLKSFTLVKDSATGASLGSALFEYEDSDVAAQAVEGL 461
Query: 78 DGLFL 82
+GL +
Sbjct: 462 NGLSI 466
>gi|326430244|gb|EGD75814.1| hypothetical protein PTSG_07932 [Salpingoeca sp. ATCC 50818]
Length = 459
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ I RD +T +S +AF+ ++ ++A ++
Sbjct: 223 LFVCKLNPVTTDDDLRLIFSRFGKILSCEIIRDWKTQESLQYAFIEFEDKAACEEAYLKM 282
Query: 78 DGLFLNFNFVH 88
+ + ++ +H
Sbjct: 283 ENVLIDDRRIH 293
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GP + LV N+ + L +F+ +G++ + + +D G+++GFA + +
Sbjct: 264 GGKGPAQV------LVENLHPKIDDKMLGEVFDSFGRIDKLDVEKDM-NGENKGFAVITF 316
Query: 65 KYADEAQKAVDRLD 78
+ ADEAQKA ++L+
Sbjct: 317 RNADEAQKACEQLN 330
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
RD +LL++ I T DL F G V DV I D RTG S+G +V +
Sbjct: 164 RDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEF 215
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 155 RSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKN 214
RSRSRS R R K RSRSRS+ + DR R RSK +D R RSRS++ DR ++
Sbjct: 375 RSRSRSKTKNDRSRSRSKTKNDRSRSRSKTKDDRSRSRSKTKDDRSRSRSKTK-DDRSRS 433
Query: 215 HGRGKYDEERRSRSRSYESASPPRHSPNSKRSPSPRKT 252
+ K D+ RSRS++ + S R N KRS SP K
Sbjct: 434 RSKTK-DDRSRSRSKAKDERSRSRSKENRKRSRSPSKN 470
>gi|410896972|ref|XP_003961973.1| PREDICTED: uncharacterized protein LOC101068055 [Takifugu rubripes]
Length = 685
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 150 SKSKGRSRSRSPRPRYRDE-HRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSAS 208
S+S+ +SR +S R + RD+ H+ K RR RSRS+ + D+ R E DH S+ R+
Sbjct: 437 SQSRSKSREKSRRSKSRDKSHKHKSDGRRGRSRSKTQDDK-RKEEVETDH---SKERNKG 492
Query: 209 PD---RHKNHGRGKYDEERRSRSRSYESASP--PRHSPNSKRSPS 248
PD +H+ +G+ E+ RS+S+S E S PR + +K +P+
Sbjct: 493 PDSDKKHREEAKGRNREKSRSKSQSKEGTSKDGPRSTSMNKDTPT 537
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I + T+ L FE YG + + + ++ G RG+AF+ Y+Y + A
Sbjct: 103 TLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYKH 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ + T L +FE +G V V + D T S+GF FV ++ A A++A++++
Sbjct: 282 LYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQM 341
Query: 78 DGLFL 82
+G L
Sbjct: 342 NGFEL 346
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|395751523|ref|XP_002829587.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Pongo abelii]
Length = 624
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 229 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 288
Query: 77 LDG 79
DG
Sbjct: 289 ADG 291
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + ++R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|242064392|ref|XP_002453485.1| hypothetical protein SORBIDRAFT_04g006716 [Sorghum bicolor]
gi|241933316|gb|EES06461.1| hypothetical protein SORBIDRAFT_04g006716 [Sorghum bicolor]
Length = 65
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 123 GREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRS 182
RE QF + E +GRI E + K +GR RSRSPRPRYR++++D+DYRRR++SRS
Sbjct: 4 AREWRKQF-----HNEHGHRGRITEENPKPRGRFRSRSPRPRYREDYQDRDYRRRNQSRS 58
Query: 183 RERYDRD 189
RERY++D
Sbjct: 59 RERYEQD 65
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I F T+ L FE YG V + I D ++G RG+AFV Y+ + A
Sbjct: 103 TLFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYKY 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
>gi|432109584|gb|ELK33748.1| Serine/arginine repetitive matrix protein 5 [Myotis davidii]
Length = 718
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 136 NAEKIQQGRIVESSSKSKGRSRSRSPR-------PRYRDEHRDKDYRRRSRSRSRE-RYD 187
N+ K + R SSSK +G SR+R+PR PR + RD RSR+ S+E R++
Sbjct: 424 NSSKERGHRRPRSSSKERGHSRTRTPRKERRHNQPRSSSKERDHS---RSRNSSKERRHN 480
Query: 188 RDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSR 229
R R SKERDH SRSR++S +R N R E SRSR
Sbjct: 481 RPRTSSKERDH---SRSRNSSKERRHNRPRTSSKERDHSRSR 519
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 241 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 300
Query: 77 LDG 79
DG
Sbjct: 301 ADG 303
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
RD +LL++ I T DL F G V DV I D RTG S+G +V +
Sbjct: 167 RDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 17 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 76
Query: 77 LDG 79
DG
Sbjct: 77 ADG 79
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 55 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 114
Query: 77 LDG 79
DG
Sbjct: 115 ADG 117
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 281 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 340
Query: 77 LDG 79
DG
Sbjct: 341 ADG 343
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + +R+G RG+AF+ Y++ + A
Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHTVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163
Query: 77 LDG 79
DG
Sbjct: 164 ADG 166
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT L FE YG + + + +R+G RG+AF+ Y++ + A
Sbjct: 136 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 195
Query: 77 LDG 79
DG
Sbjct: 196 ADG 198
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + I + T+ L FE YG + + + D+ +G +G+AF+ Y++ + A
Sbjct: 103 TLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKH 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + I + T+ L FE YG + + + D+ +G +G+AF+ Y++ + A
Sbjct: 103 TLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKH 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + I + T+ L FE YG + + + D+ +G +G+AF+ Y++ + A
Sbjct: 103 TLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKH 162
Query: 77 LDG 79
DG
Sbjct: 163 ADG 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,624,456,889
Number of Sequences: 23463169
Number of extensions: 197408277
Number of successful extensions: 1749868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20543
Number of HSP's successfully gapped in prelim test: 21042
Number of HSP's that attempted gapping in prelim test: 1110370
Number of HSP's gapped (non-prelim): 255799
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)