BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022931
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225442888|ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
vinifera]
Length = 403
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/224 (83%), Positives = 208/224 (92%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAVKDTDEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP SVPPISELGPDALLEPMT+DEF SLSKKKI IKALLLDQSY
Sbjct: 121 SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
I+GIGNW+ADEVLY A+IHPLQ A SL++ESC TL +CIK+V E
Sbjct: 181 IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIE 224
>gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/222 (83%), Positives = 207/222 (93%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAVKDTDEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP SVPPISELGPDALLEPMT+DEF SLSKKKI IKALLLDQSY
Sbjct: 121 SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+GIGNW+ADEVLY A+IHPLQ A SL++ESC TL +CIK+V
Sbjct: 181 IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQV 222
>gi|255553261|ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
Length = 403
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/255 (75%), Positives = 217/255 (85%), Gaps = 2/255 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR+AIEE+C+GKKI K+IIA D KVIDGVS SDFEA+++GK ++SAHRKGK
Sbjct: 1 MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDGVSPSDFEAALVGKTLISAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL+LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAV DTDEWPSKYSK FVELDDGLEL
Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLLN+P SVPPISELGPDALL+PM VDEF SL KKK+ IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLNNPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
ISGIGNW+ADEVLYQA+IHP Q+A S +KESCATLLKCIKEV E + ++ F
Sbjct: 181 ISGIGNWIADEVLYQARIHPQQSASSFTKESCATLLKCIKEVIEK-AIEVEADSSQFPNS 239
Query: 241 YVHKKHRENKICRLF 255
++ RE K + F
Sbjct: 240 WIF-HSREKKPGKAF 253
>gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
thaliana]
Length = 390
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/224 (83%), Positives = 202/224 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIE 224
>gi|18404050|ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
comes from this gene [Arabidopsis thaliana]
gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana]
gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana]
gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
Length = 390
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/224 (83%), Positives = 202/224 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIE 224
>gi|400261073|pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261074|pdb|3TWM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261075|pdb|3TWM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Fpg
Length = 310
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/273 (71%), Positives = 217/273 (79%), Gaps = 2/273 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV E V + F
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEK-AVEVDADSSQFPSN 239
Query: 241 YVHKKHRENKICRLFKVRLKLMLTAAAFLLNGY 273
++ +RE K + F K+ A Y
Sbjct: 240 WIF-HNREKKPGKAFVDGKKIDFITAGGRTTAY 271
>gi|357455291|ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
Length = 424
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/222 (81%), Positives = 201/222 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EE+CIGKKI K I+ADDNKVIDGVS +FEASV+GK I++A RKGK
Sbjct: 1 MPELPEVEAARRAVEENCIGKKITKCIVADDNKVIDGVSREEFEASVVGKKIVAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAV D DEWPSKYSKFF++LDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRLL DPTSVPPISELGPDAL + MT+DEFT+ L KKK IKALLLDQSY
Sbjct: 121 SFTDKRRFARVRLLKDPTSVPPISELGPDALFDFMTLDEFTERLHKKKTEIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGNWVADEVLYQA+IHP Q A SLS ESC+TL KCIKEV
Sbjct: 181 ISGIGNWVADEVLYQARIHPRQIASSLSGESCSTLYKCIKEV 222
>gi|30695252|ref|NP_849798.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA
glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
comes from this gene [Arabidopsis thaliana]
gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana]
gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis
thaliana]
gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
Length = 274
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/222 (83%), Positives = 201/222 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEV 222
>gi|356547444|ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
Length = 399
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/224 (80%), Positives = 201/224 (89%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E +C+GK+I K ++ADD+KVI GVS SDF+ASVLGK I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVEYNCVGKRITKCVVADDSKVIHGVSPSDFQASVLGKLIVAAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GAIYIKG AVT YKRSAVKD DEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAIYIKGAAVTNYKRSAVKDEDEWPSKYSKIFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DPTSVPPISELGPDAL EPMT+++FT+SL KKK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLEKFTESLHKKKTEIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNWVADEVLYQA+IHP Q A SLS ESC+ L KCIKEV E
Sbjct: 181 ISGIGNWVADEVLYQARIHPRQVASSLSNESCSNLSKCIKEVIE 224
>gi|400261071|pdb|3TWK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261072|pdb|3TWK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Fpg
Length = 297
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/223 (82%), Positives = 199/223 (89%)
Query: 2 PELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKN 61
PELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGKN
Sbjct: 2 PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGKN 61
Query: 62 LWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELS 121
LWL LDSPPFPSFQFG GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLELS
Sbjct: 62 LWLELDSPPFPSFQFGXAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLELS 121
Query: 122 FTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYI 181
FTDKRRFAKVRLL +PTSV PISELGPDALLEP TVDEF +SL+KKKITIK LLLDQ YI
Sbjct: 122 FTDKRRFAKVRLLANPTSVSPISELGPDALLEPXTVDEFAESLAKKKITIKPLLLDQGYI 181
Query: 182 SGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
SGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEV E
Sbjct: 182 SGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIE 224
>gi|449468940|ref|XP_004152179.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Cucumis
sativus]
gi|449513447|ref|XP_004164328.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Cucumis
sativus]
Length = 402
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/224 (81%), Positives = 198/224 (88%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEEHC+GK I K++IADD KVIDGVS SDFEAS+LGK ILSAHRKGK
Sbjct: 1 MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+LWL LDSPPFP+F FGM GAIYIKGVAVT YKRS V D DEWPSKYSKFFVELDDG++L
Sbjct: 61 HLWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKV LL DP SVPPIS+LGPDALLEPM +DEF +SL KKK+ IK LLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNWVADEVLYQA+IHP Q+A +LSKESCA L K I+EV E
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVIE 224
>gi|224134470|ref|XP_002327413.1| predicted protein [Populus trichocarpa]
gi|222835967|gb|EEE74388.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/224 (83%), Positives = 205/224 (91%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEEHCIGKKI K+IIADD+KVIDGVS SDF A+++GK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDGVSPSDFVAALVGKTIVSALRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAV D+DEWPSKYSKFFV+LDDGLEL
Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKFFVQLDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP S PPISELGPDALLEPMTVDE SLSKKK+ IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLEDPASKPPISELGPDALLEPMTVDELHGSLSKKKVAIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+SGIGNW+ADEVLYQA+IHPLQ A SLS+ES ATL KCIKEV E
Sbjct: 181 VSGIGNWIADEVLYQARIHPLQIASSLSRESSATLHKCIKEVIE 224
>gi|357117165|ref|XP_003560344.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Brachypodium
distachyon]
Length = 402
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 165/222 (74%), Positives = 189/222 (85%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC+G++I + +ADD KV+ S FE +++G+ I++A RKGK
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVSTSRVAFERAMVGRTIVAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWLRLD+PPFPSFQFGM GAIYIKGVAVT YKRSAV DEWPSKYSKFFVELDDGLE
Sbjct: 61 NLWLRLDAPPFPSFQFGMAGAIYIKGVAVTNYKRSAVSTADEWPSKYSKFFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRL +DP +VPPISELGPDAL EPM+VD F DSLS+KKI IKALLLDQS+
Sbjct: 121 SFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSRKKIGIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGNW+ADEV YQ++IHPLQ A SLS+ESC L K IKEV
Sbjct: 181 ISGIGNWIADEVFYQSRIHPLQIASSLSRESCEALHKSIKEV 222
>gi|326507936|dbj|BAJ86711.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 190/223 (85%), Gaps = 1/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ IL+A R+G
Sbjct: 1 MPELPEVEAARRALEAHCVGRRITRCAVADDPKVVVAAAGRVAFERAMVGRTILAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWLRLD+PPFPSFQFGM GAIYIKGVAVT+YKRSAV D+WPSKYSKFFVELDDGLE
Sbjct: 61 KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSADDWPSKYSKFFVELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL +DP +VPPISELGPDAL EPM+VD F DSLSKKKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSKKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ISGIGNW+ADEVLYQ+K HPLQ A SL++ESC L + I+EV
Sbjct: 181 FISGIGNWIADEVLYQSKTHPLQIASSLTRESCEALHQSIQEV 223
>gi|115469160|ref|NP_001058179.1| Os06g0643600 [Oryza sativa Japonica Group]
gi|51535473|dbj|BAD37370.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa
Japonica Group]
gi|51535507|dbj|BAD37426.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa
Japonica Group]
gi|113596219|dbj|BAF20093.1| Os06g0643600 [Oryza sativa Japonica Group]
gi|215694501|dbj|BAG89494.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 400
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 158/224 (70%), Positives = 187/224 (83%), Gaps = 2/224 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--FEASVLGKAILSAHRK 58
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ I++A R+
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GKNLWLRLD+PPFPSFQFGM GAIYIKGV VT+YKRS V TDEWPSKYSKFFV+LDDGL
Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
E SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F DSLS+KKI IKALLLDQ
Sbjct: 121 EFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
S+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV
Sbjct: 181 SFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEV 224
>gi|222635968|gb|EEE66100.1| hypothetical protein OsJ_22131 [Oryza sativa Japonica Group]
Length = 405
Score = 343 bits (879), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 158/224 (70%), Positives = 187/224 (83%), Gaps = 2/224 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--FEASVLGKAILSAHRK 58
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ I++A R+
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GKNLWLRLD+PPFPSFQFGM GAIYIKGV VT+YKRS V TDEWPSKYSKFFV+LDDGL
Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
E SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F DSLS+KKI IKALLLDQ
Sbjct: 121 EFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
S+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV
Sbjct: 181 SFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEV 224
>gi|326499279|dbj|BAK06130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 157/224 (70%), Positives = 189/224 (84%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR A+EEHC+GK+I++ A+D KVIDGV+ S EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEAARLALEEHCVGKRILRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPP+PSFQFGM GAIYIKGV +++YKRSAV T+EWPSKYSK FVELDDGLE
Sbjct: 61 NLWLVLDSPPYPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+RLL++P +VPPISELGPDAL EPM +DEF S +K IK+LLLDQS+
Sbjct: 121 SFTDKRRFAKIRLLDNPEAVPPISELGPDALCEPMQLDEFVQSFGRKNAPIKSLLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+SGIGNW+ADEVLYQA+IHP+QT+ +SKE C L +CIKEV E
Sbjct: 181 MSGIGNWMADEVLYQARIHPMQTSSKISKEKCKALHRCIKEVIE 224
>gi|357145554|ref|XP_003573683.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Brachypodium
distachyon]
Length = 448
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 156/224 (69%), Positives = 188/224 (83%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR A+EEHC+GK+IV+ ADD KVIDG++ S EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEAARLALEEHCVGKRIVRCSAADDTKVIDGIAPSQLEAALVGRTIAAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWPSKYSK FVELDDGLE
Sbjct: 61 NLWLVLDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+RLL++P ++PPISELGPDAL +PM +D+F SL +K + IK+LLLDQS
Sbjct: 121 SFTDKRRFAKIRLLDNPEAIPPISELGPDALFDPMQLDDFVQSLGRKNVPIKSLLLDQSI 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+SGIGNW+ADEVLY A+IHP+QTA +SKE L +CIKEV E
Sbjct: 181 MSGIGNWIADEVLYLARIHPMQTASKISKEKYKALHRCIKEVIE 224
>gi|218200905|gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group]
Length = 415
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 157/224 (70%), Positives = 187/224 (83%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIE 224
>gi|222640316|gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group]
Length = 415
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 157/224 (70%), Positives = 187/224 (83%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIE 224
>gi|115475806|ref|NP_001061499.1| Os08g0304900 [Oryza sativa Japonica Group]
gi|50508157|dbj|BAD30940.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica
Group]
gi|50508168|dbj|BAD30974.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica
Group]
gi|113623468|dbj|BAF23413.1| Os08g0304900 [Oryza sativa Japonica Group]
gi|215693253|dbj|BAG88635.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 409
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 157/224 (70%), Positives = 187/224 (83%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EV E
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIE 224
>gi|258644410|dbj|BAI39671.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Indica
Group]
Length = 409
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+SGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EV E
Sbjct: 181 VSGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIE 224
>gi|242096492|ref|XP_002438736.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor]
gi|241916959|gb|EER90103.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor]
Length = 399
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD+KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDDKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKGV VT YKRS V +EWPSKYSKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGVPVTNYKRSVVNSEEEWPSKYSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+VD+F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSVDDFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHRSIQEV 223
>gi|226498176|ref|NP_001141023.1| uncharacterized protein LOC100273102 [Zea mays]
gi|194699240|gb|ACF83704.1| unknown [Zea mays]
gi|413943558|gb|AFW76207.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 384
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 182/223 (81%), Gaps = 1/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + ++ D V+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHQSIEEV 223
>gi|413943559|gb|AFW76208.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 281
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 182/223 (81%), Gaps = 1/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + ++ D V+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHQSIEEV 223
>gi|168061202|ref|XP_001782579.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665899|gb|EDQ52568.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 496
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 172/222 (77%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+AA+ + C+G IVK+++A+D+KVIDGV+ + + ++LGK IL HRKGK
Sbjct: 1 MPELPEVQAAKVLVGSRCLGGVIVKALVANDSKVIDGVTPAALQKALLGKKILETHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+LWL+LDSPP+PSFQFGM+GA+ +KGV QYK S V DT+E+PSKY K ++LD G+E+
Sbjct: 61 HLWLQLDSPPYPSFQFGMSGAVVVKGVKGLQYKSSKVDDTEEFPSKYWKVHLKLDTGVEV 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+FTDKRRFA+VRLL+DP PPISELG DA LE + +FT++L KK IKALLLDQS+
Sbjct: 121 AFTDKRRFARVRLLDDPAKEPPISELGLDAYLELPSAKDFTEALKTKKGAIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGNWV DEVLYQ+KIHP Q+A SL E C L I+ V
Sbjct: 181 LAGIGNWVGDEVLYQSKIHPEQSANSLKDEECTRLHTAIRVV 222
>gi|302771624|ref|XP_002969230.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii]
gi|300162706|gb|EFJ29318.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii]
Length = 268
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC G I ++ +ADD VI+G++ D + ++ K I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL LD PP FQFGM GA+Y+KGV T+Y RSAVKD DEWPSKYSK + LD G+E+
Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRL+ DP PPISELGPDA E F DS++KKK IKA+LLDQS+
Sbjct: 120 SFTDKRRFARVRLIQDPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQSF 179
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+GIGNW+ADEVLYQ++IHP Q A +L+ C L IKEV
Sbjct: 180 IAGIGNWIADEVLYQSRIHPEQPASTLTAIDCERLRGAIKEV 221
>gi|302754324|ref|XP_002960586.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii]
gi|300171525|gb|EFJ38125.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii]
Length = 268
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 165/222 (74%), Gaps = 1/222 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC G I ++ +ADD VI+G++ D + ++ K I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL LD PP FQFGM GA+Y+KGV T+Y RSAVKD DEWPSKYSK + LD G+E+
Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRLL DP PPISELGPDA E F DS++KKK IKA+LLDQ +
Sbjct: 120 SFTDKRRFARVRLLQDPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQVF 179
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+GIGNW+ADEVLYQ++IHP Q A +L+ C L IKEV
Sbjct: 180 IAGIGNWIADEVLYQSRIHPEQPASTLTAIDCERLRGAIKEV 221
>gi|34015259|gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group]
gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza sativa Japonica Group]
Length = 405
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/233 (58%), Positives = 167/233 (71%), Gaps = 28/233 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGM--------TGAIYI-KGVAVTQYKRSAVKDTDEWPSKYSKFF 111
NLWL LDSPPFPSFQFG G Y+ +G Q ++
Sbjct: 61 NLWLALDSPPFPSFQFGFLLYRMPIRNGWSYLHQGCGTEQIQK----------------- 103
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
+DDGLE SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK I
Sbjct: 104 --MDDGLEFSFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPI 161
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
KALLLDQS+ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EV E
Sbjct: 162 KALLLDQSFISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIE 214
>gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 183/249 (73%), Gaps = 8/249 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAA+R ++ HC+G IVK+++ +D KVIDGV+ + + S+ GK ILS HRKGK
Sbjct: 1 MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVELDDGLE 119
+LWL+LDSPP+PSFQFGM+GA+ IKGV QY+ S V D +E +P+ YSK + L G+E
Sbjct: 61 HLWLKLDSPPWPSFQFGMSGAVIIKGVKGPQYRSSKVGDEEEAFPTTYSKVHLVLSTGVE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+FTDKRRFA+VRLL DP+ VPPISELG DA LE + ++ +++ KK ++KALLLDQS
Sbjct: 121 LAFTDKRRFARVRLLEDPSKVPPISELGFDAYLELPSAEQLIEAMKTKKGSVKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE-ALGV---SLQFYKC 235
+I+GIGNWV DEVLY AKIHP Q+A SL +E L ++EV E A+ V S QF +
Sbjct: 181 FIAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDADSEQFPRS 240
Query: 236 YFAKPYVHK 244
+ Y H+
Sbjct: 241 WL---YHHR 246
>gi|413943560|gb|AFW76209.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
gi|413943561|gb|AFW76210.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 208
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQ
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQ 179
>gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 167/223 (74%), Gaps = 1/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
M ELPEVEAA+R + HC+G IVK+I+ +D KVIDGV+ + + ++ GK I+SA R+GK
Sbjct: 1 MAELPEVEAAKRLVNCHCLGATIVKAIVDNDTKVIDGVTPAVLQETLTGKKIVSALREGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVELDDGLE 119
++WL+LDS P+PS+QF + A +KG +QY+ V D +E +P+ +SK ++LD+G+E
Sbjct: 61 HIWLQLDSRPWPSYQFDTSSAFIVKGAKGSQYRSPKVSDEEEAFPTTHSKVLLQLDNGVE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
++FTDK RF +VRLL++P+ PPISELG DA LE ++FT++L KK ++KALLLDQS
Sbjct: 121 VAFTDKLRFGRVRLLDNPSIAPPISELGFDAYLELPNAEQFTEALKTKKGSVKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++SGIGNWV DEVL+QAKIHP Q+ SL++E A L I+EV
Sbjct: 181 FLSGIGNWVGDEVLFQAKIHPEQSVNSLTEEQVAKLHTAIREV 223
>gi|384251140|gb|EIE24618.1| DNA glycosylase/AP lyase [Coccomyxa subellipsoidea C-169]
Length = 373
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 151/223 (67%), Gaps = 2/223 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR + HC GK I ++I ADD KVI+GVS + + ++ G+ I+ AHRKGK
Sbjct: 1 MPELPEVEAARVLVHTHCKGKCIEQAIAADDTKVIEGVSPEELQNALRGRTIVDAHRKGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++WL LD P F GMTG + ++GV + QY +A K DEWP KY K +E D G++
Sbjct: 61 HMWLELDGENPALLFHLGMTGYMVVEGVPIVQY-VNAKKRGDEWPPKYWKVVLETDCGVK 119
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+F D RRF K+RL DP + PIS+LG D +L + F+ L+K++ ++K LLLDQS
Sbjct: 120 LAFCDPRRFGKIRLQADPENNEPISKLGFDPILSMPDLATFSGMLAKQRRSVKPLLLDQS 179
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +G+GNWVADE+LYQAKIHP Q A SL + CA L +K V
Sbjct: 180 FSAGVGNWVADEILYQAKIHPEQKAASLDEAQCAALHHQMKAV 222
>gi|302845178|ref|XP_002954128.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f.
nagariensis]
gi|300260627|gb|EFJ44845.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f.
nagariensis]
Length = 325
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 154/230 (66%), Gaps = 8/230 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAA+R +E C+GK+I + + A D+KV + S D ++ G+ +++AHRKGK
Sbjct: 1 MPELPEVEAAKRLMERGCVGKRIERVVAAKDDKVFEDASPDDVRRALEGRRVVAAHRKGK 60
Query: 61 NLWLRLDSPP--FPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
LWL LD+P +P FGMTG I ++ + T+YKR + DEWP +++K ++L+ G
Sbjct: 61 YLWLELDNPDGLWPLLHFGMTGGIVVQNMGATKYKRIHLASNPDEWPPRFTKLELDLEGG 120
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKK-----KITIK 172
+++F D RRF +V+LL +P++ P+S+LG D L E +++F ++ K+ + IK
Sbjct: 121 AKVAFVDVRRFGRVKLLANPSAQEPLSKLGFDVLDELPPLEQFIAAVRKRVARAPGLKIK 180
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ALLLDQ + SGIGNWV DEVLYQA+IHP Q+A SL + A L + I+ V
Sbjct: 181 ALLLDQEFCSGIGNWVGDEVLYQARIHPEQSAASLGDSALAALRESIRSV 230
>gi|218198635|gb|EEC81062.1| hypothetical protein OsI_23872 [Oryza sativa Indica Group]
Length = 422
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 130/180 (72%), Gaps = 11/180 (6%)
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTG---AIYIKGVA-----VTQYKRSAVKDTDE 102
++ S H + N+W L F F FG+T Y VA ++ RS V TD+
Sbjct: 76 SLFSWHNETINIWTHLLG--FVLF-FGLTVLHLGQYFPQVADLIGHLSWDGRSVVSSTDD 132
Query: 103 WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTD 162
WPSKYSKFFV+LDDGLE SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F D
Sbjct: 133 WPSKYSKFFVQLDDGLEFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFAD 192
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
SLS+KKI IKALLLDQS+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV
Sbjct: 193 SLSRKKIGIKALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEV 252
>gi|359476561|ref|XP_002268184.2| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
vinifera]
Length = 126
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 107/113 (94%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
N+WL+LDSPPFPSFQFGM GA+ IKGVAVT+YKRSAVKDTDEWPSKYSK F+E
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEWPSKYSKLFIE 113
>gi|296085164|emb|CBI28659.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 107/113 (94%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
N+WL+LDSPPFPSFQFGM GA+ IKGVAVT+YKRSAVKDTDEWPSKYSK F+E
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEWPSKYSKLFIE 113
>gi|255080114|ref|XP_002503637.1| predicted protein [Micromonas sp. RCC299]
gi|226518904|gb|ACO64895.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 139/228 (60%), Gaps = 7/228 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN----KVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE+AR +E HCIG K+ K +D K+ V F +++L K + +AH
Sbjct: 1 MPELPEVESARCLVEAHCIGAKVTKVEFNEDGSFDEKIFKDVERKAFVSALLNKTLTAAH 60
Query: 57 RKGKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK++W + P F FGMTGA I+G +YK + V DT WP +++K V D
Sbjct: 61 RRGKHMWWDMSGGADSPLFHFGMTGAFSIRGKGAMKYK-AFVVDTSNWPPRFAKLVVTFD 119
Query: 116 DGLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+G+ L++TD RRF ++RL+ D T+ PPISELG D LL F +K+ IK++
Sbjct: 120 NGIALAYTDPRRFGRIRLVRGDVTASPPISELGFDPLLAMPDEAAFASRFAKRGGPIKSV 179
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ+ +G+GNW+ADEVLY +++HP Q A SL+ L +++V
Sbjct: 180 LLDQTIAAGVGNWIADEVLYHSRLHPEQPAKSLTPAQLRDLRDAMEDV 227
>gi|134117608|ref|XP_772575.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255190|gb|EAL17928.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 447
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAV 233
>gi|134117606|ref|XP_772574.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255189|gb|EAL17927.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 475
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAV 233
>gi|58270186|ref|XP_572249.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228507|gb|AAW44942.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 475
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAV 233
>gi|58270184|ref|XP_572248.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228506|gb|AAW44941.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 447
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAV 233
>gi|321264442|ref|XP_003196938.1| hypothetical protein CGB_L0290C [Cryptococcus gattii WM276]
gi|317463416|gb|ADV25151.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 478
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 143/234 (61%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++++I G ++F + G+ I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDRIIFTGGTDHNEFAKEISGRTITGCERK 59
Query: 59 GKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF + L
Sbjct: 60 GKMFWITLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESVDVWPPRFYKFVLRLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 KGSIGDEPRELAFIDGRRLGRLRLVSDPVSSYPPVSELGFDPVLSHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIKDLHHQLRAV 233
>gi|189189872|ref|XP_001931275.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972881|gb|EDU40380.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 424
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 138/229 (60%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV +++H +GK I DD+ V G SAS F+ ++ GK ++ A ++
Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTIKGVNALDDDIVYGKVGTSASAFKKAITGKKVVDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK WL LD+PP P F FGM G + IK T Y RSA + EWP K+ KF +++++
Sbjct: 61 GKYFWLVLDTPPHPLFHFGMAGWLEIKNEE-TGYYRSAKPEKTEWPPKFWKFVLQMEEEP 119
Query: 119 E--LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E ++F D RR A++RL++ D P+ E GPD +L+ +TV+ L KK+
Sbjct: 120 ENEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVEWLGKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+KALLLDQ+ ISGIGNWV DEV+YQAK+HP Q + + S E TL + I
Sbjct: 180 VKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQIKTLHEAI 228
>gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 277
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 129/226 (57%), Gaps = 7/226 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE ARR + + IG I V I DD +D V++ FE ++ G+ I + R
Sbjct: 1 MPELPEVEKARRLVHDLAIGSPISRVHRPIIDDKVFVD-VASGQFERALSGRKITHSKRH 59
Query: 59 GKNLWLRLDSPP--FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
GK LW +LD P F FGMTGA +G+ QY S T +WP +++K V ++
Sbjct: 60 GKQLWWQLDGNDALVPCFHFGMTGAFVARGIDGIQYYNSKASGTGDWPPRFAKLVVAFEN 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G+EL+F D RRF K++L+ D V I +LGPD LLE + F ++ IK ++
Sbjct: 120 GVELAFVDPRRFGKIKLVADVAEV--IGQLGPDPLLEMPNEEAFAALWRRRSAPIKTAIM 177
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ I+GIGNW+ADE+LY+A++HP A LS + + EV
Sbjct: 178 DQKVIAGIGNWMADEILYRARVHPETRANELSSTQLEAIRFRVTEV 223
>gi|298708421|emb|CBJ48484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 532
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 139/253 (54%), Gaps = 18/253 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD------DNKVIDGVSASDFEASVL-----G 49
MPELPEVE +R +EE C+G I + D + D V D A L G
Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEG 60
Query: 50 KAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSK 109
+ I+ R+GK +W LD PP P F FGMTGA +KG ++K K ++EWP +++K
Sbjct: 61 RKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGE--KRHKFVKFKVSEEWPPRFAK 118
Query: 110 FFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+++ +G L+ TD RR ++V+L +P + PPIS LGPD L P++++ F +L+K
Sbjct: 119 LEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTA 178
Query: 170 TIKALLLDQSY-ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT----LLKCIKEVRE 224
IKA+LL Q +SG+GNWVADEV +QA +HP +L E A LL +E E
Sbjct: 179 PIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACE 238
Query: 225 ALGVSLQFYKCYF 237
A F K +
Sbjct: 239 ARADYTSFPKEWL 251
>gi|303272279|ref|XP_003055501.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463475|gb|EEH60753.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 330
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 136/228 (59%), Gaps = 7/228 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN----KVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE+AR E+H +G IV +D K+ + S F +++ G+ + +A
Sbjct: 1 MPELPEVESARVLCEKHIVGATIVSVEFNEDGTYDEKIFKEIDESQFTSALKGRTVKAAR 60
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIK-GVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R GK+LW L + P F FGMTGA+ IK G ++ +YK AV DT WP +++K V
Sbjct: 61 RLGKHLWWDLGTRSTPLFHFGMTGAMTIKGGGSIVKYKAFAV-DTVNWPPRFAKLVVTFS 119
Query: 116 DGLELSFTDKRRFAKVRLLND-PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+G+ L++TD RRF +VRL++ T PP+S+LG D LL F +K+ +KA+
Sbjct: 120 NGVTLAYTDPRRFGRVRLVDGVVTESPPLSDLGFDPLLAMPDEKTFASLFAKRAAPVKAV 179
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ +G+GNWVADEVL+ A++HP Q A SL+ A + + V
Sbjct: 180 LLDQKVAAGVGNWVADEVLFHARVHPEQPAKSLTHGQLAMVRDAMSMV 227
>gi|159489098|ref|XP_001702534.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280556|gb|EDP06313.1| predicted protein [Chlamydomonas reinhardtii]
Length = 297
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 141/231 (61%), Gaps = 27/231 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR +E C GK I+ + +ADD KVI+G + + ++ G+ +L AHRKG
Sbjct: 1 MPELPEVEAARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKG- 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVELDDGLE 119
MTG I +KGV VT+YKR+ ++ D + WP +++K +EL G
Sbjct: 60 -----------------MTGGIVVKGVGVTKYKRAHLESDPESWPPRFTKLELELQGGGR 102
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLE-PMTVDEFTDSLSKK-----KITI 171
L++ D RRF +++LL DP + P+ LG D LL+ P T +F + ++ + I
Sbjct: 103 LAYVDSRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERVVRAPSLRI 162
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
KALLLDQ + SGIGNWVADEVLYQA+IHP QTA SL S A L I+EV
Sbjct: 163 KALLLDQEFCSGIGNWVADEVLYQARIHPEQTATSLDDGSMAALHAAIREV 213
>gi|320588680|gb|EFX01148.1| formamidopyrimidine-DNA glycosylase [Grosmannia clavigera kw1407]
Length = 365
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 133/221 (60%), Gaps = 22/221 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E + +H +GK+I K+ DD+ V G + + F ASVLGK +LSA +
Sbjct: 1 MPEIAEAARIVHFLRKHLVGKQIKKAAAIDDSNVFGKAGTTGATFAASVLGKKVLSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAV---TQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ LDS P P FGMTG I+IKG+ Y + D D WP ++ KF ++ +
Sbjct: 61 GKYFWIVLDSQPHPVMHFGMTGWIHIKGMRTAYTNYYNKMKPGDADLWPPRFWKFHLQAE 120
Query: 116 -----DGLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFT----- 161
D +EL+FTD RRF +VRL++ P P+ E GPD +++ D FT
Sbjct: 121 ADGAADKVELAFTDPRRFGRVRLIDCPGDRIRQFSPLVENGPDPVVD---ADIFTESFVR 177
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQ 202
D++ ++ + IKALLLDQ++ISGIGNWV DEVL+QA++HP Q
Sbjct: 178 DTMQRRHVPIKALLLDQAFISGIGNWVGDEVLFQARLHPEQ 218
>gi|425768860|gb|EKV07371.1| Formamidopyrimidine-DNA glycosylase, putative [Penicillium
digitatum PHI26]
gi|425776365|gb|EKV14584.1| Formamidopyrimidine-DNA glycosylase, putative [Penicillium
digitatum Pd1]
Length = 370
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 133/232 (57%), Gaps = 11/232 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I EH +GK + K D+ + G SA++F+ ++ GK I+ ++
Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSATEFQKAMQGKKIVGVGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL + SPP FGM G + IK A T Y R+ EWP KY KF +E +DG
Sbjct: 61 GKYFWLTMSSPPHAVMHFGMAGWLKIKD-ADTYYYRTDKPVDQEWPPKYWKFLLETNDGP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + TVDE TD L KKK+
Sbjct: 120 KTEAAFVDARRLGRIRLVDCPAGEIRNHTPLKENGPDPVADKDTVDEAWLTDKLGKKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L + V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKALHSAVHYV 231
>gi|367029573|ref|XP_003664070.1| hypothetical protein MYCTH_2139555 [Myceliophthora thermophila ATCC
42464]
gi|347011340|gb|AEO58825.1| hypothetical protein MYCTH_2139555 [Myceliophthora thermophila ATCC
42464]
Length = 391
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 16/248 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ + H +GKKI + +DN V G + ++ ++ GK +LSA +
Sbjct: 1 MPEIAEIARVVHYLRLHLVGKKIKTATAVEDNNVFGKVGTTGAEVSRALTGKKVLSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKF-FVEL 114
GK WL LD PP P FGMTG I+IKG A T Y K+ ++ D WP KY KF +
Sbjct: 61 GKYFWLVLDQPPHPVMHFGMTGWIHIKGDRTAYTNYYKKMKPEEMDLWPPKYWKFHLITE 120
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKK 168
+ +E++FTD RRF +VRL++ P P+ E G D +++ T D + + +
Sbjct: 121 NPAVEVAFTDPRRFGRVRLVDCPGESIRKFSPLVENGTDPVVDTDVFTEDYLREKMRSRH 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----RE 224
+ IKAL+LDQ+ ISGIGNWV DEVLYQAK+HP Q S E L K I+ V +
Sbjct: 181 VPIKALILDQTIISGIGNWVGDEVLYQAKLHPEQYCDDFSDEQITRLYKSIRHVCQFAVD 240
Query: 225 ALGVSLQF 232
LG S QF
Sbjct: 241 KLGDSDQF 248
>gi|353236828|emb|CCA68814.1| related to formamidopyrimidine-DNA glycosylase [Piriformospora
indica DSM 11827]
Length = 364
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 133/229 (58%), Gaps = 7/229 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A I G+KI K +D V G S ++F + G+ ++ R GK
Sbjct: 1 MPELPEVERAAGVIRAAAKGRKISKVETTEDTIVYTGTSHTEFAQEITGRTLVDTGRYGK 60
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF---FVELDD 116
+L LD P GMTGAI ++G Y++ +D ++WP K+ KF F L++
Sbjct: 61 VFYLLLDGDGRVPVLHLGMTGAIQVRGGEALYYRKKPKQDPNDWPPKFMKFILHFEPLEE 120
Query: 117 G---LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
G E++F D RR A++RL D + PPIS LG D +L ++EF + + K+ IKA
Sbjct: 121 GGEITEIAFLDPRRLARIRLCKDHLNEPPISALGFDPILSMPPIEEFQEKVLKRGCPIKA 180
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLLDQS+ +G+GNW+ADEVL+ + +HP QTA SLS E L + I+ V
Sbjct: 181 LLLDQSFSAGVGNWIADEVLFHSAVHPEQTAKSLSPEKIKLLYRNIEYV 229
>gi|424513788|emb|CCO66410.1| formamidopyrimidine-DNA glycosylase [Bathycoccus prasinos]
Length = 361
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 9/230 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD------DNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE AR+ + HC+ K I D K + F+ +VL K +L+
Sbjct: 1 MPELPEVEHARKLVHAHCVNKICTNVIFPSAETGVLDEKCFKDIGEEMFKKAVLNKRLLN 60
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
HRKGK WL + F F FGMTGA +KG +Y V D + WP K+ KF +E
Sbjct: 61 THRKGKQGWLEFEGESFVLFHFGMTGAFSVKGERPLKYVEFKV-DQESWPPKFYKFVLEF 119
Query: 115 DDGLE-LSFTDKRRFAKVRLLND-PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
G + L++TD RRF +V++ N+ P P+++LG D LE ++ EF ++ IK
Sbjct: 120 SGGEKCLAYTDPRRFGRVQVRNECPRKSAPVNKLGFDPYLERISETEFEKIFRRRNAAIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++LLDQS G+GNW+ADE+LY+AKIHP A L+ E+ +L + + +V
Sbjct: 180 SVLLDQSVACGVGNWMADEMLYRAKIHPEVKASELNGEAMRSLREAMFDV 229
>gi|393218790|gb|EJD04278.1| AtMMH-1 [Fomitiporia mediterranea MF3/22]
Length = 351
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 6/223 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A I+ H GK I+K +D V G + +F +V G+ + R GK
Sbjct: 1 MPELPEVHRAANFIKTHAQGKTIIKVDANEDTIVFSGTTHEEFANAVRGRTVKDVGRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
+L LD P P FGMTG I IKG + YK K WP +++K + L++
Sbjct: 61 VFYLDLDGDGPMPVMHFGMTGNILIKGESPLTYKEGPKKSDTLWPPRFTKCILHLENPPP 120
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+++F D RR ++RL +P PPIS LG D +L ++D+F+ S+ K+ +KAL
Sbjct: 121 APATQIAFIDPRRLGRIRLCKEPLLEPPISLLGFDPILRMPSLDDFSKSVLKRSCPVKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
LLDQS+ +G+GNWVADE+LY +++HP Q +LS + + L K
Sbjct: 181 LLDQSFSAGVGNWVADEILYHSRVHPEQRCNTLSSDQVSVLYK 223
>gi|255947552|ref|XP_002564543.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591560|emb|CAP97795.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 370
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 131/232 (56%), Gaps = 11/232 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I EH +GK + K D+ + G S ++F+ ++ GK I+ A ++
Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSGAEFQKAMQGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ + SPP FGM G + IK A T Y RS EWP KY KF +E +D
Sbjct: 61 GKYFWMTMSSPPHAVMHFGMAGWLKIKD-ADTYYYRSDKPADQEWPPKYWKFLLETNDES 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TVDE T+ L KKK+
Sbjct: 120 KTEAAFVDARRLGRIRLVDCPADEIRDHTPLKENGPDPVTDKDTVDEAWLTEKLGKKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNADQIKDLHSAIHYV 231
>gi|336466518|gb|EGO54683.1| hypothetical protein NEUTE1DRAFT_104118 [Neurospora tetrasperma
FGSC 2508]
gi|350286595|gb|EGZ67842.1| hypothetical protein NEUTE2DRAFT_169673 [Neurospora tetrasperma
FGSC 2509]
Length = 415
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 136/247 (55%), Gaps = 15/247 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK I + DD V G A ++GK I+SA +
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKIVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L P FGMTG I+IKG A T Y K+ + D+WP KY KF +E +
Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDEHDKWPPKYWKFKIETE 120
Query: 116 DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDAL--LEPMTVDEFTDSLSKKKI 169
DG E++FTD RRF +VR+++ P P+ E GPD + L+ T D + + +++
Sbjct: 121 DGDEMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKMKSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REA 225
IKALLLDQ+ ISGIGNWVADEVLY AK+HP Q S L + I+ V +
Sbjct: 181 PIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEMKQLYESIRYVCHTAVDK 240
Query: 226 LGVSLQF 232
LG S QF
Sbjct: 241 LGDSDQF 247
>gi|299755916|ref|XP_001828971.2| AtMMH-1 [Coprinopsis cinerea okayama7#130]
gi|298411439|gb|EAU92978.2| AtMMH-1 [Coprinopsis cinerea okayama7#130]
Length = 370
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 150/278 (53%), Gaps = 14/278 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ GK+I K + D V + + +F + + + A R GK
Sbjct: 1 MPELPEVQRAVNTLKHVAKGKRITKVVTYPDPIVFNATTNEEFGKELENRTVSDAKRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT-DEWPSKYSKFFVELDDGL 118
+L LD P FGMTG +++KGV YK + KD+ D WP ++ KF + L +
Sbjct: 61 VFYLDLDGKGKKPVLHFGMTGMLHVKGVKPMHYKEAPRKDSEDTWPPRFCKFILHLQNPT 120
Query: 119 ---------ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
E++F D RR A++RL P PISELG D LL +++ F+ ++ K+
Sbjct: 121 GSSNGEPETEVAFIDARRLARIRLCTSPMEERPISELGFDPLLSMPSLETFSRTVLKRSC 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVS 229
IKALLLDQS+ +G+GNWVADEVLY A+IHP Q +L+ E L CI V + V
Sbjct: 181 PIKALLLDQSFSAGVGNWVADEVLYHARIHPEQRCNTLTTEQLKNLHHCIVYVCQT-AVD 239
Query: 230 LQFYKCYFAKPYVHKKHRENKICRLFKVRLKLMLTAAA 267
+ F + ++ HR NK + F V+ LML + +
Sbjct: 240 VDADHKLFPENWLF-GHRWNKGKKSFSVK-PLMLPSGS 275
>gi|261194587|ref|XP_002623698.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis
SLH14081]
gi|239588236|gb|EEQ70879.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis
SLH14081]
gi|239613483|gb|EEQ90470.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ER-3]
gi|327355061|gb|EGE83918.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ATCC
18188]
Length = 378
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 135/234 (57%), Gaps = 13/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +G I K + DD V G +A++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYIRKYLVGNTITKVHVQDDPIVFGKAGTTAAEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE--WPSKYSKFFVELDD 116
GK W+ + SPP P FGMTG + + T Y+R+ + +E WP K+ KF +++DD
Sbjct: 61 GKYFWITMSSPPHPVMHFGMTGWLKFT-IMNTHYRRTTAANNEESQWPPKFWKFILQIDD 119
Query: 117 GL--ELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKK 168
E +F D RR +VRL+N P + P+ E GPD +L+ MT+D + L+ KK
Sbjct: 120 ASKSETAFVDPRRLGRVRLVNCPGADIRKHSPLKENGPDPILDKHIMTLDWLSRKLASKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ IKALLLDQS ISGIGNW+ DE+LY AKIHP Q + ++ + L I V
Sbjct: 180 VPIKALLLDQSNISGIGNWMGDEILYHAKIHPEQYSNTIEQGQIEQLHSAISYV 233
>gi|164428247|ref|XP_958637.2| hypothetical protein NCU05984 [Neurospora crassa OR74A]
gi|157072070|gb|EAA29401.2| hypothetical protein NCU05984 [Neurospora crassa OR74A]
Length = 415
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 136/247 (55%), Gaps = 15/247 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK I + DD V G A ++GK ++SA +
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKMVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L P FGMTG I+IKG A T Y K+ + D+WP KY KF +E +
Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIETE 120
Query: 116 DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDAL--LEPMTVDEFTDSLSKKKI 169
DG E++FTD RRF +VR+++ P P+ E GPD + L+ T D + + +++
Sbjct: 121 DGDEMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKMKSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA---- 225
IKALLLDQ+ ISGIGNWVADEVLY AK+HP Q S L + I+ V +
Sbjct: 181 PIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEMKQLYESIRYVCQTAVDK 240
Query: 226 LGVSLQF 232
LG S QF
Sbjct: 241 LGDSDQF 247
>gi|310799523|gb|EFQ34416.1| formamidopyrimidine-DNA glycosylase domain-containing protein
[Glomerella graminicola M1.001]
Length = 427
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 134/238 (56%), Gaps = 19/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKKI K DD V G S FE ++ G+ ++S +
Sbjct: 1 MPEIAEVARCVHFLRHHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKALKGRKVVSVGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ D PP GMTG I+IKG A T Y K+ + D WP KY KF +E D
Sbjct: 61 GKYFWITFDKPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKAGEADVWPPKYWKFQLETD 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS-----L 164
D + +FTD RRF ++RL++ P + P+ E GPD +++ VD FT++ +
Sbjct: 121 DNPPVAAAFTDPRRFGRIRLVDCPGADIRKHSPLKENGPDPVVD---VDVFTEAYLAGKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + +KALLLDQS+ISGIGNWVADEVLYQA++HP Q S A L + ++ V
Sbjct: 178 RTRHVPVKALLLDQSHISGIGNWVADEVLYQARLHPEQYCDSFDVAEVARLYEAVRYV 235
>gi|367040051|ref|XP_003650406.1| hypothetical protein THITE_2109818 [Thielavia terrestris NRRL 8126]
gi|346997667|gb|AEO64070.1| hypothetical protein THITE_2109818 [Thielavia terrestris NRRL 8126]
Length = 393
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 141/256 (55%), Gaps = 22/256 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I +D V G + + ++ GK +LSA +
Sbjct: 1 MPEIAEVARIVHYLRLHLVGKSIKSVKAIEDTNVFGKAGTTGPEVAEALTGKKVLSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK WL LD PP P FGMTG I+IKG A T Y K+ ++ D WP KY KF ++ +
Sbjct: 61 GKYFWLVLDKPPHPVMHFGMTGWIHIKGDRTAYTNYYKKMKPEELDAWPPKYWKFHLKTE 120
Query: 116 D-GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFT-----DSLS 165
D +E++FTD RRF +VRL++ P P+ E GPD +++ D FT D +
Sbjct: 121 DPTVEIAFTDPRRFGRVRLVDCPGESIRKYSPLVENGPDPVVD---TDVFTEGYLRDKMR 177
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV--- 222
+ + IKAL+LDQS ISGIGNWV DEVLYQAK+HP Q + E L + I+ V
Sbjct: 178 SRHVPIKALILDQSVISGIGNWVGDEVLYQAKLHPEQYCDDFTDEQIKRLYEAIRYVCQF 237
Query: 223 -REALGVSLQFYKCYF 237
+ LG S +F K +
Sbjct: 238 AVDKLGDSDEFPKDWL 253
>gi|390604079|gb|EIN13470.1| AtMMH-1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 346
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 131/229 (57%), Gaps = 7/229 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARR +E GK I + D+ V G + +F + G+ I R GK
Sbjct: 1 MPELPEVENARRVLEAVGKGKMIQRVDSVKDDIVFCGTTHDEFAKELEGRMITGVQRYGK 60
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD--DG 117
++ LD FP FGMTG I I+G Y+ S+ K + +WP + KF + L DG
Sbjct: 61 LFYMELDGEGRFPVLHFGMTGMIQIQGQEPFHYQSSSRKVSAQWPPNFLKFVLHLGTPDG 120
Query: 118 ----LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
++++F D RR ++RL++ P + PPISELG D +L + EF+ + ++ IKA
Sbjct: 121 EQIAVQVAFCDARRLGRIRLVSSPMTSPPISELGFDPILSMPALSEFSSKVLRRSCPIKA 180
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLLDQ + +G+GNWVADE+LY ++IHP Q +LS+ L ++V
Sbjct: 181 LLLDQGFSAGVGNWVADEILYHSRIHPEQRCHTLSELQLERLHTHTRQV 229
>gi|330922902|ref|XP_003300019.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1]
gi|311326034|gb|EFQ91877.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1]
Length = 424
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 134/230 (58%), Gaps = 13/230 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPE+ EV +++H +GK I + A D+ +I G SAS F+ ++ GK ++ A +
Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTI-NIVTAQDDPIIYGKVGTSASAFQKAITGKKVVDARQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK WL LDS P P F GM G + K T Y RS + EWP K+ KF +++ +
Sbjct: 60 QGKYFWLVLDSQPHPLFHLGMAGWVEYKNEE-TGYYRSTKPEKTEWPPKFWKFVLQMKEE 118
Query: 118 LE--LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
E ++F D RR A++RL++ D P+ E GPD +L+ +TVD L KK+
Sbjct: 119 PENEMAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVDWLGKKLRSKKV 178
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+KALLLDQ+ ISGIGNWV DEV+YQAK+HP Q + + S E L + I
Sbjct: 179 PVKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQIKALHEAI 228
>gi|402216981|gb|EJT97063.1| hypothetical protein DACRYDRAFT_91738 [Dacryopinax sp. DJM-731 SS1]
Length = 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 10/237 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE E A R ++++ I +DN V +S +F + + +L+AHR GK
Sbjct: 1 MPELPEAERATRLLQKYLKDGLITAVDTIEDNIVYSDISHEEFAKELTNRTVLNAHRYGK 60
Query: 61 NLWLRLDSPP----FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL-- 114
WL LD+P P F GMTG I ++G Y R KD WP ++ KF + +
Sbjct: 61 VFWLELDAPTEESRHPVFHLGMTGMIQLQGQEPVWY-RVRPKDASAWPPRFMKFIIHVTP 119
Query: 115 --DDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+ ++FTD RR ++RL ++P + PPI +LG D LL ++ F+ + K+ + IK
Sbjct: 120 PSGPAVHVAFTDARRLGRIRLRSNPCAQPPIIDLGFDPLLSMPSLPTFSSLMLKRNMPIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE-ALGV 228
ALLLDQS+ +G+GNWVADEVL+ A+IHP A L E + + ++ V E A+GV
Sbjct: 180 ALLLDQSFSAGVGNWVADEVLFHARIHPETRANELRPEEVKRVWEKVRWVCEVAVGV 236
>gi|297805248|ref|XP_002870508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316344|gb|EFH46767.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 89/102 (87%)
Query: 77 GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLND 136
M AIYIKGVAVT+YKRSAVK ++EWPSKYSKF V+LDDGLELS TDKRR AKVRLL +
Sbjct: 6 SMADAIYIKGVAVTKYKRSAVKVSEEWPSKYSKFLVQLDDGLELSITDKRRLAKVRLLAN 65
Query: 137 PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
PTSV PISEL P+ALLEPMTV+EF SL+KKKITIK LLLDQ
Sbjct: 66 PTSVSPISELHPNALLEPMTVEEFAASLAKKKITIKPLLLDQ 107
>gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gibberella zeae PH-1]
Length = 392
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 141/252 (55%), Gaps = 23/252 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+I+ + DD V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASATDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG I+IK A T Y K+ + ++WP ++ KF + +
Sbjct: 61 GKYFWIALEKPPHLVMHFGMTGWIHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDS-----L 164
+E++FTD RRF +VRL+N P P+ E GPD +++ VD FT+ +
Sbjct: 121 GSPEVEVAFTDSRRFGRVRLINCPGDEIRQHSPLVENGPDPVVD---VDRFTEEYLHSKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+ + IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q S TL K I+ V +
Sbjct: 178 RARHVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQITTLYKMIRYVCQ 237
Query: 225 A----LGVSLQF 232
LG S +F
Sbjct: 238 TAVDKLGDSDEF 249
>gi|242768773|ref|XP_002341637.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724833|gb|EED24250.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
stipitatus ATCC 10500]
Length = 359
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 139/254 (54%), Gaps = 17/254 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +G+ + + +D+ V G +A++F+ ++ G I A ++
Sbjct: 1 MPELAEVARIVHFIRKHLVGRTLANVQVQNDDIVYGKAGTTAAEFQKAMQGNKITGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP FGMTG + I+ A T Y R+ D EWP KY KF +E D+
Sbjct: 61 GKYFWITMAKPPHVVMHFGMTGWLKIRN-ADTYYYRTTNADDKEWPPKYWKFLLETDETP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD L + +T+D D + KK+
Sbjct: 120 KTEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-----CIKEVREA 225
IKALLLDQ+ ISGIGNW+ DE+LY +KIHP Q + +L+ E L C VR
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTNEQIQQLHNSIDYVCTTSVR-V 238
Query: 226 LGVSLQFYKCYFAK 239
L S QF + + K
Sbjct: 239 LADSEQFPEDWLFK 252
>gi|449550458|gb|EMD41422.1| hypothetical protein CERSUDRAFT_89989 [Ceriporiopsis subvermispora
B]
Length = 364
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 6/228 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A R + + + K+IV+ +D+ V +G+S +F + + + R GK
Sbjct: 1 MPELPEVERAARLVRDVALHKRIVRVETTEDDIVYNGISHVEFAKELQDRVVTGVGRYGK 60
Query: 61 NLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG-- 117
++ LD S P FGMTG + ++G Y+ + K + +WP ++ KF + + +
Sbjct: 61 VFYIELDGSGRMPVLHFGMTGMLQVRGEKAIYYRETPRKASTDWPPRFMKFILHVRNDES 120
Query: 118 ---LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
EL+F D RR ++RL + P + PPIS LG D ++ ++ FT S+ K+ IKAL
Sbjct: 121 GATTELAFLDARRLGRIRLCSSPLTEPPISTLGFDPIISMPDLEVFTKSVRKRTCPIKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQS+ +G+GNWVADE+LY A+IHP +L+ + A L + EV
Sbjct: 181 LLDQSFSAGVGNWVADEILYHARIHPEARCHTLTDDQIAPLYRQTLEV 228
>gi|378729637|gb|EHY56096.1| formamidopyrimidine-DNA glycosylase [Exophiala dermatitidis
NIH/UT8656]
Length = 447
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 135/251 (53%), Gaps = 32/251 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV I +H +GK + K + DDN V G SA++FE ++ GK ++ A ++
Sbjct: 1 MPEIAEVARTVHYIRKHLVGKTLAKVVATDDNNVYGKAGTSAAEFEKAMTGKKVIDAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---------------RSAVKDTDE- 102
GK W+ + SPP P FGM+G ++ K Y+ K T++
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMSGWLHFKSEHTYYYQPKKADKTTKPNEAGEAGEAKSTEQT 120
Query: 103 -WPSKYSKFFVEL-------DDGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDA 150
WP K KF + D +E +F D RRFA++RL+N P S V P+ E GPD
Sbjct: 121 PWPPKVMKFLLTTKPDDDNSSDVVEAAFVDMRRFARIRLVNCPASEIRNVSPLKENGPDP 180
Query: 151 LLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
+++ +TVD KK+ IKA+LLDQ+ ISGIGNWV DE++Y AK+HP Q A +L+
Sbjct: 181 VIDKDIVTVDWLRQKCKSKKVPIKAMLLDQAVISGIGNWVGDEIMYHAKMHPEQYANTLT 240
Query: 209 KESCATLLKCI 219
+ L K I
Sbjct: 241 DDQIVQLHKSI 251
>gi|429857831|gb|ELA32673.1| formamidopyrimidine-dna glycosylase [Colletotrichum gloeosporioides
Nara gc5]
Length = 390
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 136/249 (54%), Gaps = 17/249 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKKI + D V G S FE +V GK ++S +
Sbjct: 1 MPEIAEVARCVHFLRRHLLGKKIARVSAPGDANVFGKVGTSGLAFEEAVKGKKVVSVGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVEL- 114
GK W+ D PP GMTG I+IKG A T Y K+ + D WP KY KF++E
Sbjct: 61 GKYFWITFDRPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKKSEMDTWPPKYWKFWIETE 120
Query: 115 -DDGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKK 167
D + +FTD RRF ++RL++ P + P+ E GPD +++ T D F + +
Sbjct: 121 GDPTVRAAFTDPRRFGRIRLVDCPGAEIRNHSPLKENGPDPVVDVDVFTEDYFKQMMQSR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA-- 225
+ +KALLL+Q+ ISGIGNWVADEVLYQAK+HP Q +K TL + I+ V +
Sbjct: 181 HVPVKALLLNQANISGIGNWVADEVLYQAKLHPEQYCDDFTKAEIRTLYEKIRYVCQTAV 240
Query: 226 --LGVSLQF 232
LG S +F
Sbjct: 241 DKLGDSDEF 249
>gi|119194501|ref|XP_001247854.1| hypothetical protein CIMG_01625 [Coccidioides immitis RS]
gi|392862910|gb|EAS36408.2| formamidopyrimidine-DNA glycosylase [Coccidioides immitis RS]
Length = 416
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 143/264 (54%), Gaps = 20/264 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK + ++ D+ + G SA +F+ ++ G I+ A ++
Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP P FGMTG + IKGV Y+ +D WP K+ KF + +DD
Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEDDGPWPPKFWKFQLVMDDDK 120
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +VRL++ P S P+ E GPD +++ V E +SKKK+
Sbjct: 121 KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVIDKGIVTESWLKSIVSKKKVP 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REAL 226
IKALLLDQS ISG+GNW+ADEVLY ++IHP QT+ +L L I V + L
Sbjct: 181 IKALLLDQSIISGLGNWMADEVLYHSQIHPEQTSNTLDDSQIRELNSAIHYVCATSVDLL 240
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
G S +F + +H HR NK
Sbjct: 241 GDSARFPADWL----MH--HRWNK 258
>gi|322711093|gb|EFZ02667.1| formamidopyrimidine-DNA glycosylase [Metarhizium anisopliae ARSEF
23]
Length = 372
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 146/253 (57%), Gaps = 25/253 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +G+KI + DD+ V G + ++ EA++ GK ++SA +
Sbjct: 1 MPEIAEVARIVHFLRLHLVGRKIASASAIDDSNVFGKVGTTGAEVEAALRGKQVVSAGNQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTD--EWPSKYSKFFVEL 114
GK W+ LD PP FGMTG ++I+G A T Y + +KD++ WP K+ KF ++
Sbjct: 61 GKYFWITLDKPPHLVMHFGMTGWVHIRGEKTAYTNYYKK-MKDSELTTWPPKFWKFHLKT 119
Query: 115 DDG--LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS----- 163
+ +E++FTD RRF +VRL++ P + P+ E GPD +++ D FT+
Sbjct: 120 EGKPEVEVAFTDARRFGRVRLVDCPGADIRKHTPLKENGPDPVID---TDRFTEEYLRGK 176
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
+ + + +KALLLDQ+ ISGIGNWVADE LYQAK+HP Q + S S L + I+ V
Sbjct: 177 MQARHVPVKALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAEIKKLYESIRYVC 236
Query: 224 EA----LGVSLQF 232
+ LG S QF
Sbjct: 237 QTAVDKLGDSDQF 249
>gi|345570452|gb|EGX53273.1| hypothetical protein AOL_s00006g139 [Arthrobotrys oligospora ATCC
24927]
Length = 417
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 141/247 (57%), Gaps = 16/247 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPE+ E+ I + GK ++K+++A+++ ++ ++S F ++LGK ++ A ++G
Sbjct: 1 MPEISEITRVVHYINRYLAGK-VIKNVVANEDAIVFKDTTSSAFVKAMLGKKVVEAKQQG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK-----RSAVKDTDEWPSKYSKFFVEL 114
K W+ +DSPP P FGMTG I Y+ K+ EWP ++ KF E+
Sbjct: 60 KYFWIEMDSPPHPVMHFGMTGWITFSKAPEAHYRADMAEEDDDKEEIEWPPRFMKFVFEM 119
Query: 115 DD-GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+D G +FTD RR +VRL++ P V P+ E GPD +++ + D F L+++K
Sbjct: 120 EDEGNNAAFTDARRLGRVRLIDVPAEQIRKVSPLKENGPDPVVDGLDEDWFKGVLNQRKK 179
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREA 225
+KALLLDQ +ISG+GNWV DE+LY A+IHP Q + +LSK L + K E
Sbjct: 180 PVKALLLDQGFISGVGNWVGDEILYHARIHPEQYSNTLSKAQQKQLYESTMYVCKTACEL 239
Query: 226 LGVSLQF 232
LG S +F
Sbjct: 240 LGDSSKF 246
>gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
marneffei ATCC 18224]
gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
marneffei ATCC 18224]
Length = 362
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 130/229 (56%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + +D+ V G SA++F+ ++ G ++ A ++
Sbjct: 1 MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP FGMTG + I+ A T Y R+ D EWP KY KF +E D+
Sbjct: 61 GKYFWITMSKPPHVVMHFGMTGWMKIRN-ADTYYYRTTNADDKEWPPKYWKFLLETDENP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD + + +T++ D + K++
Sbjct: 120 KTEAAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
IKALLLDQ+ ISGIGNW+ DE+LY +KIHP Q + +L+ E L I
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSI 228
>gi|426201665|gb|EKV51588.1| hypothetical protein AGABI2DRAFT_41042, partial [Agaricus bisporus
var. bisporus H97]
Length = 311
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 132/233 (56%), Gaps = 14/233 (6%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
EVE A R + K+I K ADD V GV++++F A + G+ ++ AHR GK ++
Sbjct: 1 EVERATRLLNALGADKEITKVETADDTIVYSGVTSTEFAACLTGRKVIRAHRYGKVFFME 60
Query: 66 LDSP-PFPSFQFGMTGAIY----IKGVAVTQYKRSAVKDT--DEWPSKYSKFFVELDD-- 116
L+ P FGMTG ++ +KG + T Y R A DT EWP ++ KF + L +
Sbjct: 61 LNGDGKHPVMHFGMTGMLHACFAVKGQSPTHY-REAPSDTAVSEWPPRWMKFILHLTNPK 119
Query: 117 ---GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIK 172
E++F D RR ++RL P + PPISELG D LL T EF K++ I IK
Sbjct: 120 NGQTTEIAFRDARRLGRIRLCASPHTEPPISELGFDPLLSMPTFSEFLTLFRKRRGIAIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLLDQ++ +G+GNWVADEVLY A+IHP Q +LS+E L + I V E
Sbjct: 180 VLLLDQTFSAGVGNWVADEVLYHARIHPEQRCNTLSQEQLQVLHEKITYVCET 232
>gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 385
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 15/237 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-----KDTDEWPSKYSKFFVE 113
GK W+ + SPP P FGMTG + +K V Y+ A ++ + WPS + KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120
Query: 114 LDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLS 165
LDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K++ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L + L I V
Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQIEQLYSAINYV 237
>gi|389640539|ref|XP_003717902.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae 70-15]
gi|351640455|gb|EHA48318.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae 70-15]
Length = 417
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 130/233 (55%), Gaps = 11/233 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKK+VK DD V G + A++ + ++S +
Sbjct: 1 MPEIAEVARVAHFLRLHLVGKKVVKVSAQDDANVFGKVGTTGEAVVAALKNRKVVSVGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W +D P GMTG +I+G A T Y K+ + D+WP KY +F +E+
Sbjct: 61 GKYFWFVMDKAPHLVMHLGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQ 120
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKI 169
DG +FTD RRF +VRL++ P + P+ E GPD +++ T + + +++
Sbjct: 121 DGTAAAFTDARRFGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKMRSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+KALLLDQ+ ISG+GNWVADEVL+QA++HP Q + S E A L I++V
Sbjct: 181 PVKALLLDQAVISGVGNWVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDV 233
>gi|408394974|gb|EKJ74165.1| hypothetical protein FPSE_05667 [Fusarium pseudograminearum CS3096]
Length = 392
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 23/252 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+I+ + DD V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASAIDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG ++IK A T Y K+ + ++WP ++ KF + +
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDS-----L 164
+E +FTD RRF +VRL++ P P+ E GPD +++ VD FT+ +
Sbjct: 121 GSPEVEAAFTDSRRFGRVRLIDCPGDEIRQHSPLVENGPDPVVD---VDRFTEEYLHSKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+++ IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q S TL K I+ V +
Sbjct: 178 RARRVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQITTLYKMIRYVCQ 237
Query: 225 A----LGVSLQF 232
LG S +F
Sbjct: 238 TAVDKLGDSDEF 249
>gi|225559783|gb|EEH08065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 383
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 132/235 (56%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I + DD V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYIRTYLVGKTITRVHAQDDPIVFGKAGTSAAEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEEPVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RR A+VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRLARVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLASK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K+ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I V
Sbjct: 180 KVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAINYV 234
>gi|406863668|gb|EKD16715.1| BcatrD protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1101
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 131/229 (57%), Gaps = 12/229 (5%)
Query: 6 EVEAAR--RAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKN 61
E E AR +++ +GK + DD V G +A++F+ +++GK +L A ++GK
Sbjct: 28 EKEIARIVHYLKKSLVGKTLSTVKAQDDANVFGKVGTTAAEFQKAMVGKKVLDAGQQGKY 87
Query: 62 LWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--GLE 119
W+ + SPP P F FGMTG +I+G + Y+ D D WP K+ KF +E + +E
Sbjct: 88 FWMIMSSPPHPVFHFGMTGWFHIRGEPTSHYRPKETDDLDIWPPKFWKFALETNSEPKVE 147
Query: 120 LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKITIKA 173
+FTD RRFA+VRL++ D P+ E GPD +++ +T D + KK + +KA
Sbjct: 148 AAFTDARRFARVRLVDCAAEDIRKTTPLKENGPDPVIDKDVLTEDWLVTKMKKKHVPVKA 207
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+LDQ+ ISGIGNWV DE++Y AK+HP Q + S+ L I+ V
Sbjct: 208 FMLDQANISGIGNWVGDEIMYHAKLHPEQYTDTFSESEIRHLHASIRYV 256
>gi|302920238|ref|XP_003053028.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733968|gb|EEU47315.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 376
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 130/235 (55%), Gaps = 13/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+IV + D V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIGDKNVFGKVGTSGEEVEAALEGKEIVSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFF--VE 113
GK W+ L+ PP FGMTG ++IK A T Y K+ + ++WP K+ KF E
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEKTAYTNYYKKMKDSELEQWPPKFWKFQFKTE 120
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDAL--LEPMTVDEFTDSLSKK 167
G+E++FTD RRF +VRL++ P P+ E GPD + L+ T D + +
Sbjct: 121 GSPGVEVAFTDARRFGRVRLVDCPGDQIRKYSPLVENGPDPVVDLDRFTEDYLRGKMRAR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q TL K I+ V
Sbjct: 181 HVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDEFDDSQVTTLYKMIRYV 235
>gi|342320533|gb|EGU12473.1| Hypothetical Protein RTG_01507 [Rhodotorula glutinis ATCC 204091]
Length = 388
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 12/231 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR+ +E GK+I + +D V G + +F ++ GK + S R GK
Sbjct: 1 MPELPEVEAARKKLEGIAKGKRIKRVQAKEDTIVFAGTTHDEFIKALEGKTVESVKRLGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---RSAVKDTDEWPSKYSKFFVELD-D 116
N +L L SPP P FGM+G +I+G Y+ SAV+ + EWP KY+K ++E + +
Sbjct: 61 NFYLSLSSPPHPILHFGMSGQAHIRGEVPIAYRSSSSSAVEASQEWPPKYAKAWIEFEGE 120
Query: 117 GLEL---SFTDKRRFAKVRLL----NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
G E+ +F D RR +++L+ ++ VPP+SELG D LL ++D +L K+K
Sbjct: 121 GGEVAEWAFCDARRLGRIKLVDAEADEIEKVPPLSELGADPLLNMPSLDTLRTALGKRKA 180
Query: 170 TIKALLLDQSY-ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
IKA+LLDQ+ G+GN++ DE+LYQ+ IHP + LS S + LL +
Sbjct: 181 PIKAVLLDQNGPFCGLGNYLVDEILYQSAIHPSLPSTYLSLPSPSALLSTL 231
>gi|402073074|gb|EJT68710.1| formamidopyrimidine-DNA glycosylase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 397
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 139/235 (59%), Gaps = 13/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + +H +GKK+ +I +D+ V G + + A+++GK ++SA +
Sbjct: 1 MPEIAEVARVVHFLRQHLVGKKVRMAIAQEDSSVFGKVGTTGPEVAAALMGKKVVSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVA---VTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK WL L+ PP GMTG ++++G+ YK+ + D+WP KY+K +E +
Sbjct: 61 GKYFWLVLEKPPHLVMHLGMTGWVHLRGIKSAYTNYYKKMKPGEEDQWPPKYAKLQLETE 120
Query: 116 --DGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKK 167
+ +E+++TD RRF ++RL++ P P+ E GPD +++ T + F ++ +
Sbjct: 121 GPNKVEVAYTDPRRFGRIRLVDCPGDEIRKHTPLVENGPDPVVDADVFTREYFAAKMTAR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++ IKALLLDQ+ ISGIGNWV DEVL+QA++HP + + S+ L +++V
Sbjct: 181 RVPIKALLLDQTVISGIGNWVGDEVLFQARLHPERYSNECSEAEVGRLYDAVRDV 235
>gi|119500164|ref|XP_001266839.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri
NRRL 181]
gi|119415004|gb|EAW24942.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri
NRRL 181]
Length = 367
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 130/229 (56%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFIDQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + EWP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKEWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ + GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPAEEIRKHSPLKDNGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSI 228
>gi|407926350|gb|EKG19317.1| Ribosomal protein S13-like H2TH [Macrophomina phaseolina MS6]
Length = 424
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 133/227 (58%), Gaps = 13/227 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H +GK I +++ A ++ ++ G SAS F+ ++ GK +L A +
Sbjct: 1 MPEIGEVARIVHYLRKHVVGKTI-RAVRAQEDDIVYGKAGTSASAFQQALTGKKVLDARQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-KDTDEWPSKYSKFFVELD- 115
+GK WL + P P FGM+G I V YK +A + EWP KY KF +E++
Sbjct: 60 QGKYFWLVMSEAPHPLMHFGMSGWIKFSNVDSAYYKPAAKGPEEQEWPPKYWKFVLEMEG 119
Query: 116 -DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKK 168
+ E +F D RR A++RLL+ P V P+ E GPD +++ +TV+ + K+
Sbjct: 120 KEKCEAAFVDARRLARIRLLDAPGEELRKVSPLKENGPDPVIDKNILTVEWLAKKMRSKR 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+ +KALLLDQ+ ISG+GNWV DEVLYQAKIHP Q + + + +L
Sbjct: 180 VPVKALLLDQANISGVGNWVGDEVLYQAKIHPEQYSNTFNDAQIKSL 226
>gi|240276344|gb|EER39856.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces
capsulatus H143]
gi|325089797|gb|EGC43107.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces
capsulatus H88]
Length = 383
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I K D V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYICSNLVGKTITKVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEEPVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RRF +VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLTSK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
K+ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I
Sbjct: 180 KVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAI 231
>gi|303311231|ref|XP_003065627.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240105289|gb|EER23482.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|320039451|gb|EFW21385.1| formamidopyrimidine-DNA glycosylase [Coccidioides posadasii str.
Silveira]
Length = 416
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK + ++ D+ + G SA +F+ ++ G I+ A ++
Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP P FGMTG + IKGV Y+ + WP K+ KF + +DD
Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEGDGPWPPKFWKFRLVMDDDK 120
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +VRL++ P S P+ E GPD + + V E +SKKK+
Sbjct: 121 KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVTDKGIVTESWLKSIVSKKKVP 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REAL 226
IKALLLDQS +SG+GNW+ADEVLY ++IHP QT+ +L L I V + L
Sbjct: 181 IKALLLDQSIMSGLGNWMADEVLYHSQIHPEQTSNTLDDSQIRELNSAIHYVCATSVDLL 240
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
G S +F + +H HR NK
Sbjct: 241 GDSARFPADWL----MH--HRWNK 258
>gi|409051255|gb|EKM60731.1| hypothetical protein PHACADRAFT_203883 [Phanerochaete carnosa
HHB-10118-sp]
Length = 355
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 121/221 (54%), Gaps = 6/221 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A + GK+I + +DN V + S+FE + G+ + R GK
Sbjct: 1 MPELPEVERAAALLRTLAKGKQIARVEAVEDNLVFSDTTHSEFEKELEGRTVKDVARYGK 60
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
+ LD P FGMTG + +KG T YK + K + +WP ++ KF + + D
Sbjct: 61 VFYFDLDGDGRMPVLHFGMTGMLQVKGQLATYYKETPRKASTDWPPRFMKFILHIRDETT 120
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
E++F D RR +VRL+ P PPIS LG D +L ++ F + ++ IKAL
Sbjct: 121 GSTTEVAFLDARRLGRVRLVKSPLEEPPISALGFDPILSMPKLEPFKVQVLRRTCPIKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
LLDQS+ +G+GNWVADEVLY A+IHP + +L A L
Sbjct: 181 LLDQSFSAGVGNWVADEVLYHARIHPERRCHTLDDTELAAL 221
>gi|428173714|gb|EKX42614.1| hypothetical protein GUITHDRAFT_141036 [Guillardia theta CCMP2712]
Length = 330
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 139/285 (48%), Gaps = 61/285 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGK---------- 50
MPELPEVE ARR +E C+G + + DNKV +GV+ F+ + G
Sbjct: 1 MPELPEVERARRVLERFCVGFVVKCCQVVQDNKVFEGVAPDTFKERMTGDQLAPCVLLLH 60
Query: 51 ---------------------------------------AILSAHRKGKNLWLRLDSPPF 71
IL+A RKGK+LWL L P+
Sbjct: 61 LLSRMLLLFAHDHRDCSRCDVKIPENVWQELCSCYIPGATILAARRKGKHLWLELKERPW 120
Query: 72 PSFQFGMTG---AIYIKGV-AVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRR 127
P GMTG A+ G V +Y S V D + WP K+ KF + +++G +++F RR
Sbjct: 121 PLIHLGMTGSFAAVSPDGTKEVAEYVNSRV-DAESWPPKFWKFRLVMENGNDVAFIAIRR 179
Query: 128 FAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNW 187
F +VR+ DP P+ +LG D L + + + +F D L + +K LLDQS+ +G+GNW
Sbjct: 180 FERVRMQQDPRRESPVKDLGFDPLTDMLPLADFKDELLSRSGPVKGALLDQSFCAGVGNW 239
Query: 188 VADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQF 232
+ADEVLYQA++HP + SLS E +K EA+ SLQ
Sbjct: 240 IADEVLYQARLHPQTPSSSLSLEQ-------VKVEVEAVWQSLQM 277
>gi|238486134|ref|XP_002374305.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|220699184|gb|EED55523.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|391871771|gb|EIT80928.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus oryzae
3.042]
Length = 369
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK I+ A ++
Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D+
Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRN-ADTYYYRTDKPQDKEWPPKYWKFLLETDEDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TV E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+KALLLDQ+ ISGIGNW+ DE+LY A+IHP Q + +L+ + L + V
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKELHSALHYV 231
>gi|169771323|ref|XP_001820131.1| formamidopyrimidine-DNA glycosylase [Aspergillus oryzae RIB40]
gi|83767990|dbj|BAE58129.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 369
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK I+ A ++
Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D+
Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRN-ADTYYYRTDKPQDKEWPPKYWKFLLETDEDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TV E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+KALLLDQ+ ISGIGNW+ DE+LY A+IHP Q + +L+ + L + V
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKELHSALHYV 231
>gi|451999073|gb|EMD91536.1| hypothetical protein COCHEDRAFT_1194331 [Cochliobolus
heterostrophus C5]
Length = 432
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 11/225 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV +++H +GK I +DN V G SA+ F+ ++ GK IL A ++
Sbjct: 1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQEDNIVYGKVGTSAAAFQKAMSGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK WL +D+ P P FGM+G + T Y R + EWP KY KF ++L +
Sbjct: 61 GKYFWLVMDTAPHPLMHFGMSGWMKFSNDE-TAYYRPTKPEEAEWPPKYWKFILQLQEEP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E++F D RR A++RL++ D P+ E GPD +++ +TV+ + L K++
Sbjct: 120 KNEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+KALLLDQ+ ISGIGNWV DE++YQAK+HP Q + + S E L
Sbjct: 180 VKALLLDQANISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQVKRL 224
>gi|392571854|gb|EIW65026.1| AtMMH-1 [Trametes versicolor FP-101664 SS1]
Length = 384
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 139/276 (50%), Gaps = 28/276 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A + + E + K IV A+D V G+S ++F A + G+ + A R GK
Sbjct: 1 MPELPEVERATKLLREVAVSKTIVDIEAAEDTIVFSGISHTEFAAELKGRVVEDAQRYGK 60
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD---- 115
+L L P FGMTG + +KG T Y+ + K + +WP ++ V L
Sbjct: 61 VFYLTLSGEGRHPVMHFGMTGMLQVKGQLATYYRETPRKASTDWPPRFMTASVPLRTLLP 120
Query: 116 ---------------------DGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEP 154
+ +++F D RR ++RL P + PPIS LG D +L
Sbjct: 121 SPLTVLLTKQFILHIKGPTDAETTQVAFLDARRLGRIRLCASPLTEPPISALGFDPILGM 180
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
+ D+F + K+ +KALLLDQS+ +G+GNWVADE+LY A++HP + LS E
Sbjct: 181 PSADDFKKGVRKRSCPVKALLLDQSFSAGVGNWVADEILYHARVHPEERCNVLSDEQLDA 240
Query: 215 LLKCIKEVREALGVSLQFYKCYFAKPYVHKKHRENK 250
L K EV + VS+ F + ++ KHR K
Sbjct: 241 LFKQTSEVCR-IAVSVNADDSLFPEDWLF-KHRWGK 274
>gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 363
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 134/233 (57%), Gaps = 13/233 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG---VSASDFEASVLGKAILSAHR 57
MPEL EV I +H +GK + K + A ++ +I G SA++F+ ++ GK ++ A +
Sbjct: 1 MPELAEVFRIVHFIRQHLVGKTLTK-VSAQEDPIIYGKVGTSAAEFQKAMEGKKVVGAGQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD- 116
+GK W+ + SPP P FGM G + I+ A T Y R+ + EWP KY KF +E D
Sbjct: 60 QGKYFWIAMSSPPHPVMHFGMAGWLKIRD-ADTYYYRTDKPEDKEWPPKYWKFLLETDGE 118
Query: 117 -GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKI 169
E +F D RR ++RL++ P + P+ E GPD +++ V E + L KK+
Sbjct: 119 PKTEAAFVDFRRLGRIRLVDCPADDIRNHTPLKENGPDPVVDKDIVTETWLANKLRSKKV 178
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V
Sbjct: 179 PIKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKELNSAIHYV 231
>gi|70993580|ref|XP_751637.1| formamidopyrimidine-DNA glycosylase [Aspergillus fumigatus Af293]
gi|66849271|gb|EAL89599.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus
fumigatus Af293]
Length = 367
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + WP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKTWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ E GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSI 228
>gi|159125439|gb|EDP50556.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus
fumigatus A1163]
Length = 367
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + WP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKTWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ E GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSI 228
>gi|154287302|ref|XP_001544446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408087|gb|EDN03628.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 383
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 131/235 (55%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I + D V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYICTNLVGKTITQVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEESVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RRF +VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLASK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K+ +KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I V
Sbjct: 180 KVPMKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAINYV 234
>gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue;
AFUA_4G11930) [Aspergillus nidulans FGSC A4]
Length = 363
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 147/268 (54%), Gaps = 16/268 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I +H +GK + K D+ V G SA++F+ ++ GK ++ ++
Sbjct: 1 MPELAEIYRIVHFIRQHLVGKTLAKVSTQHDDIVYGKVGTSAAEFQKAMEGKKVIGTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ + +WP KY KF +E D
Sbjct: 61 GKYFWITMTSPPHVVMHFGMAGWLKIRD-ADTYYYRTDKPEDKQWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E +F D RR A++RL++ P + P+ E GPD L++ +T + LS KK+
Sbjct: 120 KVEAAFVDFRRLARIRLVDCPAEEIRNYTPLKENGPDPLVDKDVVTKEWLGSKLSSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REAL 226
+KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V E L
Sbjct: 180 VKALLLDQAVISGIGNWMGDEILYHAKIHPEQYSNTLTDDQVKELHSSIHYVCSTSTEVL 239
Query: 227 GVSLQFYKCYFAKPYVHKKHRENKICRL 254
S +F + + K + K ++NK L
Sbjct: 240 ADSDKFPEHWLFK-HRWSKGKKNKQSSL 266
>gi|225682725|gb|EEH21009.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides
brasiliensis Pb03]
Length = 392
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 134/244 (54%), Gaps = 22/244 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-----KDTDEWPSKYSKFFVE 113
GK W+ + SPP P FGMTG + +K V Y+ A ++ + WPS + KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120
Query: 114 LDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLS 165
LDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180
Query: 166 KKKITIKALLLDQSYISGIGNWVA-------DEVLYQAKIHPLQTAVSLSKESCATLLKC 218
K++ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L + L
Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGLASAIIRDEILYHAKIHPEQYSNTLQESQIEQLYSA 240
Query: 219 IKEV 222
I V
Sbjct: 241 INYV 244
>gi|358367007|dbj|GAA83627.1| formamidopyrimidine-dna glycosylase [Aspergillus kawachii IFO 4308]
Length = 374
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ + EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPEDREWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLARIRLVDCPAEEIRKYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+KALLLDQ+ ISGIGNW+ DE+LYQAKIHP Q + +L + L I
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDDDQIKELHSAI 228
>gi|389751254|gb|EIM92327.1| hypothetical protein STEHIDRAFT_151658 [Stereum hirsutum FP-91666
SS1]
Length = 387
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A + +G++I K + DD V GV+ +F + + + + R GK
Sbjct: 1 MPELPEVHRAANLLRSLTLGRRITKVVTNDDTIVFAGVTHEEFAKELTNRTVTNVGRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF--FVELDDG 117
N ++ L+ P FGMTG + ++G Y+ + K + +WP ++ KF +E +D
Sbjct: 61 NFYMELNEKCRTPVMHFGMTGMLQVRGELPIHYRETPRKASTDWPPRFMKFVMHIEPEDS 120
Query: 118 L--------ELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
E++F D RR ++RL++ P PPIS LG D +L + F+ L K+
Sbjct: 121 TPSTPTVCTEIAFLDARRLGRIRLVSGSPLESPPISNLGFDPVLSMPDLPTFSSLLLKRS 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
IKALLL+QS+ +G+GNWVADEVLY A +HP Q +LS+E + K E+
Sbjct: 181 CPIKALLLNQSFSAGVGNWVADEVLYHAGVHPEQRCRTLSEEQVEKVWKWTSEI 234
>gi|358386142|gb|EHK23738.1| hypothetical protein TRIVIDRAFT_147401, partial [Trichoderma virens
Gv29-8]
Length = 380
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 13/222 (5%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I + DD+ V G S + E ++ GK ++SA +GK W+ LD PP
Sbjct: 10 LRQRLVGKTIANAAAIDDSSVFGKVGTSGKEVEEALKGKTVVSAGSQGKYFWITLDKPPH 69
Query: 72 PSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKR 126
FGMTG ++I G A T Y K+ D +WP K+ KF + DD +E++FTD R
Sbjct: 70 LVMHFGMTGWVHINGEKTAYTNYYKKMKESDIAQWPPKFWKFHISTDDKEPVEVAFTDAR 129
Query: 127 RFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSY 180
RF +VRL++ P P+ E GPD +++ T + + + + IKALLLDQ+
Sbjct: 130 RFGRVRLVHCPGESIRKHSPLVENGPDPVVDKDIFTEEYLRGKMKSRHVPIKALLLDQAM 189
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGNWVADE LYQAK+HP Q + + + A L + I+ V
Sbjct: 190 ISGIGNWVADETLYQAKLHPEQYSDTFDDKEIARLHESIRYV 231
>gi|358394767|gb|EHK44160.1| hypothetical protein TRIATDRAFT_16905, partial [Trichoderma
atroviride IMI 206040]
Length = 300
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 13/222 (5%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I K+ DD+ V G S + E ++ G+ ++SA +GK W+ LD PP
Sbjct: 8 LNKRLVGKTIAKASAIDDSNVFGKVGTSGKEVEEALKGRTVISAGNQGKYFWITLDKPPH 67
Query: 72 PSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKR 126
FGMTG ++I G A T Y K+ D +WP K+ KF + D +E++FTD R
Sbjct: 68 LVMHFGMTGWVHINGEKTAYTNYYKKMKESDIAQWPPKFWKFQISTTDKEPVEVAFTDAR 127
Query: 127 RFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSY 180
RF +VRL++ P P+ E GPD +++ T + + + + IKALLLDQ+
Sbjct: 128 RFGRVRLVDCPGDSIRKYSPLVENGPDPVVDKDIFTEEYLRGKIQSRHVPIKALLLDQTV 187
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGNWVADE LYQ+KIHP Q + + S + A L + I+ V
Sbjct: 188 ISGIGNWVADETLYQSKIHPEQYSDTFSGKEIARLHEAIRYV 229
>gi|327295530|ref|XP_003232460.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS
118892]
gi|326465632|gb|EGD91085.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS
118892]
Length = 387
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 18/264 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVSRIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V ++
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVC-SV 237
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
V L+ F ++ HR NK
Sbjct: 238 SVDLKGESSDFPTDWLF-HHRWNK 260
>gi|451848294|gb|EMD61600.1| hypothetical protein COCSADRAFT_123410 [Cochliobolus sativus
ND90Pr]
Length = 432
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 11/225 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV +++H +GK I +DN V G SA+ F+ ++ GK IL A ++
Sbjct: 1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQEDNIVYGKVGTSAAAFQKAMSGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK WL +++ P P FGM+G + T Y R + EWP KY KF ++L +
Sbjct: 61 GKYFWLVMETAPHPLMHFGMSGWMKFSNDE-TAYYRPTKPEEAEWPPKYWKFILQLQGEP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E++F D RR A++RL++ D P+ E GPD +++ +TV+ + L K++
Sbjct: 120 KNEVAFVDARRLARIRLVDADAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+KALLLDQ+ ISGIGNWV DE++YQ+K+HP Q + + S E L
Sbjct: 180 VKALLLDQANISGIGNWVGDEIMYQSKLHPEQYSNTFSDEQVKRL 224
>gi|340514903|gb|EGR45161.1| predicted protein [Trichoderma reesei QM6a]
Length = 302
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 19/238 (7%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I + DDN V G S + EA++ G+ ++S+ +GK W+ D PP
Sbjct: 8 LRQRLVGKTIASAAAIDDNSVFGKVGTSGKEVEAALKGRKVISSGSQGKYFWITFDKPPH 67
Query: 72 PSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD----DGLELSFTD 124
FGMTG ++I G A T Y K+ D +WP K+ KF + D D ++++FTD
Sbjct: 68 LVMHFGMTGWVHINGERTAYTNYYKKMKESDIAQWPPKFWKFHLTTDAKDGDPVQVAFTD 127
Query: 125 KRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDE--FTDSLSKKKITIKALLLDQ 178
RRF +VRL++ P P+ E GPD +++ E D + + + +KA LLDQ
Sbjct: 128 ARRFGRVRLVDCPGDAIRQHSPLVENGPDPVVDKDIFTETYLRDKMKNRHVPVKAFLLDQ 187
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQF 232
+ ISGIGNWVADE LYQAK+HP Q + + S L + I+ V + LG S QF
Sbjct: 188 AMISGIGNWVADETLYQAKLHPEQYSDTFSAAEIKRLHEAIRYVCQLAVDKLGDSDQF 245
>gi|326484609|gb|EGE08619.1| formamidopyrimidine-DNA glycosylase [Trichophyton equinum CBS
127.97]
Length = 388
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 18/264 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V ++
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVC-SV 237
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
V L+ F ++ HR NK
Sbjct: 238 SVDLKGESSDFPTDWLF-HHRWNK 260
>gi|326475689|gb|EGD99698.1| formamidopyrimidine-DNA glycosylase [Trichophyton tonsurans CBS
112818]
Length = 388
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 18/264 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V ++
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVC-SV 237
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
V L+ F ++ HR NK
Sbjct: 238 SVDLKGESSDFPTDWLF-HHRWNK 260
>gi|145229675|ref|XP_001389146.1| formamidopyrimidine-DNA glycosylase [Aspergillus niger CBS 513.88]
gi|134055255|emb|CAK43841.1| unnamed protein product [Aspergillus niger]
Length = 375
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPGDKEWPPKYWKFLLETEGDP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+KALLLDQ+ ISGIGNW+ DE+LYQAKIHP Q + +L + L I
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDDDQIRELHSAI 228
>gi|315042754|ref|XP_003170753.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum
CBS 118893]
gi|311344542|gb|EFR03745.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum
CBS 118893]
Length = 390
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 18/264 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTISKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V ++
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVC-SV 237
Query: 227 GVSLQFYKCYFAKPYVHKKHRENK 250
V L+ F ++ HR NK
Sbjct: 238 SVDLKGESSDFPTDWLF-HHRWNK 260
>gi|350638251|gb|EHA26607.1| hypothetical protein ASPNIDRAFT_172862 [Aspergillus niger ATCC
1015]
Length = 375
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPGDKEWPPKYWKFLLETEGDP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIRELHSAI 228
>gi|121708175|ref|XP_001272051.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus
NRRL 1]
gi|119400199|gb|EAW10625.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus
NRRL 1]
Length = 369
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + E+ +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFLSEYVVGKTLTKVTTTNDDIVYGKAGTSASEFQKAMEGKRVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ + PP FGM+G + GV T Y RS + +EWP K+ KF +E D
Sbjct: 61 GKYFWMIMSEPPHAVMHFGMSGWLKFDGVD-TYYYRSDKHEDEEWPPKHWKFLLETDGEP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR ++V L++ P P+ GPD +L+ +T + + KK+
Sbjct: 120 KTEAAFVDVRRLSRVHLVDCPAEDIRKYSPLKNHGPDPILDKNILTEEWLAKKIKSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+K LLDQ+ ISGIGNW+ DE+LY AKI+P Q + +L+ E L I V
Sbjct: 180 VKVFLLDQANISGIGNWMGDEILYHAKIYPEQYSNTLTDEQIKQLYSSINYV 231
>gi|336374427|gb|EGO02764.1| hypothetical protein SERLA73DRAFT_158544 [Serpula lacrymans var.
lacrymans S7.3]
Length = 364
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 126/237 (53%), Gaps = 20/237 (8%)
Query: 1 MPELP----EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELP EVE A + GK I + +D V G+S DF + G+ + A
Sbjct: 1 MPELPGISPEVERAASLVRSVAKGKLIDRVETVEDPLVFSGISHEDFARELTGRTVKHAA 60
Query: 57 RKGKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R GK +L LD P F FGMTG + +KG Y +S V WP ++ KF + L
Sbjct: 61 RYGKLFFLELDGAGRMPVFHFGMTGMLQVKGQPCLHYGKSEV-----WPPRFMKFVLYLR 115
Query: 116 DG----------LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLS 165
DG +L+F+D RR ++RL P + PPI +LG D +L ++ F +
Sbjct: 116 DGDDHDGSNPAITQLAFSDARRLGRIRLSTSPLTEPPIVDLGFDPILSMPSLSVFNALVQ 175
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K+ IKALLLDQS+ +G+GN++ADE+LY A++HP Q SLS + A L I +V
Sbjct: 176 KRTCPIKALLLDQSFSAGVGNYLADEILYHARVHPEQRCRSLSDDQTAALHHQIADV 232
>gi|440470413|gb|ELQ39484.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae Y34]
Length = 1306
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 17/216 (7%)
Query: 17 HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAIL-SAHRKGKNLWLRLDSPPFPSFQ 75
H +GKK+VK DD V V + G+A++ S +GK W +D P
Sbjct: 914 HLVGKKVVKVSAQDDANVFGKVGTT-------GEAVVVSVGTQGKYFWFVMDKAPHLVMH 966
Query: 76 FGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVR 132
GMTG +I+G A T Y K+ + D+WP KY +F +E+ DG +FTD RRF +VR
Sbjct: 967 LGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQDGTAAAFTDARRFGRVR 1026
Query: 133 LLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGN 186
L++ P + P+ E GPD +++ T + + +++ +KALLLDQ+ ISG+GN
Sbjct: 1027 LVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKMRSRRVPVKALLLDQAVISGVGN 1086
Query: 187 WVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
WVADEVL+QA++HP Q + S E A L I++V
Sbjct: 1087 WVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDV 1122
>gi|171682424|ref|XP_001906155.1| hypothetical protein [Podospora anserina S mat+]
gi|170941171|emb|CAP66821.1| unnamed protein product [Podospora anserina S mat+]
Length = 314
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 136/249 (54%), Gaps = 17/249 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I + DD V G + A++ G+ ++S+ +
Sbjct: 1 MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE----WPSKYSKFFVE- 113
GK WL LD P FGMTG + I+GV T Y S +DTD WP KY+KF +
Sbjct: 61 GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQ-TSYS-SLYRDTDTRVETWPPKYTKFHLTT 118
Query: 114 -LDDGLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSK 166
+ +E++FTD RR A+VRL++ P S P+ E GPD + + T+ F
Sbjct: 119 TCNPAVEVAFTDYRRLARVRLVDCPGAHIRSHAPLKENGPDPVQDTDRFTLAYFQSKCRA 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
+ +KA+LL+Q +ISGIGNWV DEVL+Q++IHP Q L+ TL + I+ V + A
Sbjct: 179 SRAAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQKCNHLTDAQTKTLYEVIRYVCQTA 238
Query: 226 LGVSLQFYK 234
+GV +++
Sbjct: 239 VGVLGDYHQ 247
>gi|296807993|ref|XP_002844335.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae
CBS 113480]
gi|238843818|gb|EEQ33480.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae
CBS 113480]
Length = 392
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 16/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +G I K + D+ + G SA +F+ + GK ++ ++
Sbjct: 1 MPELAEVARIVNYIRKHLVGHTIAKVVANHDDLLFGKVGTSAEEFKKHMQGKTVIGTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS K+ D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKNENFEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQITELHSAINYV 234
>gi|340383395|ref|XP_003390203.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Amphimedon
queenslandica]
Length = 400
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 132/255 (51%), Gaps = 10/255 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+K+V+ +D V G S + ++ G+ + + R GK
Sbjct: 1 MPELPEVERGRRLAQSVAKGRKLVRVFCKEDPIVFAGTSPRRWRRALEGRRVEAVRRWGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE--WPSKYSKFFVELDDGL 118
+W LD+ P P F FGM+G G+A + S E WP ++ K + DDG
Sbjct: 61 RIWFVLDAAPHPIFHFGMSGGFDAPGIAPLSLRTSPRSGEGEHRWPPRFLKILLRFDDGG 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
EL+ D RR + L DP + PI++LG D LL EF L +++ IK+LLLDQ
Sbjct: 121 ELAMFDARRLGSILLREDPENESPIADLGFDPLLAMPRPSEFFRLLQRRRRAIKSLLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSL----SKESCATLLKCIKEVREALGVSLQFYK 234
S+ +G+GNW+ADE LYQA I P A L S+ + LL +++ E S ++ +
Sbjct: 181 SFAAGVGNWIADEALYQAGIDPRCLASDLIEARSRRLRSKLLAIVRKAVEVDADSERYPR 240
Query: 235 CYFAKPYVHKKHREN 249
+ H++ N
Sbjct: 241 TWL----FHRRWGRN 251
>gi|347839801|emb|CCD54373.1| hypothetical protein [Botryotinia fuckeliana]
Length = 437
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 38/252 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I + +GK + DD V G SA++F+ ++ GK + A ++
Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVEL--D 115
GK W+ + SPP P F FGMTG +I+G + Y RS +D +E WP ++SKF ++ +
Sbjct: 61 GKYFWMIMSSPPHPVFHFGMTGWFHIRG-QDSYYYRSKNEDEEEVWPPRFSKFSLQTAGE 119
Query: 116 DGLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
+E +FTD RRF+++RL+N P+ E GPD +L+ +T + L+KK++
Sbjct: 120 PKVEAAFTDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQV 179
Query: 170 TIKALLLDQSYISGIGNWVA--------------------------DEVLYQAKIHPLQT 203
IKALLLDQ+ ISGIGNWV DE+LY A++HP Q
Sbjct: 180 PIKALLLDQANISGIGNWVGSVTLTFTSIRLFDYELSKMPLLFHSCDEILYNARLHPEQY 239
Query: 204 AVSLSKESCATL 215
+ + + E L
Sbjct: 240 SNTFTSEEIKRL 251
>gi|392575829|gb|EIW68961.1| hypothetical protein TREMEDRAFT_15463, partial [Tremella
mesenterica DSM 1558]
Length = 339
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 134/244 (54%), Gaps = 18/244 (7%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRKGKNLW 63
EVE AR+ I + C G KI K + + ++K++ G + +F + G+ I RKGK W
Sbjct: 4 EVERARKLIYDTCRGYKI-KHVDSLEDKIVYTGGTTHDEFAREITGRTITGCERKGKTFW 62
Query: 64 LRLDSPP-FPSFQFGMTGAIY-IKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL------- 114
L L FP FGMTG I +KG Y+R + WP ++ KF ++L
Sbjct: 63 LTLSGKGRFPVMHFGMTGMIQQLKGQEPNWYRRRRKESPTTWPPRFYKFVLDLEPQAGSV 122
Query: 115 -DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
D+ EL+F D R ++RL+ P PP+S LG D +L +++EF L KKK T+K
Sbjct: 123 SDEPRELAFIDGARLGRLRLIPHPVIHHPPVSLLGFDPVLSMPSLEEFQKLLLKKKGTVK 182
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGV 228
+++DQ++ +G+GNWVADE+LYQA IHP LS++ L + I++V E
Sbjct: 183 GVIMDQAFSAGVGNWVADEILYQAHIHPSCPIPHLSEKDVENLHQWIRKVPLMAVEVNAD 242
Query: 229 SLQF 232
SLQF
Sbjct: 243 SLQF 246
>gi|400600307|gb|EJP67981.1| formamidopyrimidine-DNA glycosylase [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 136/252 (53%), Gaps = 23/252 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK+I + DD V G + + A++ GK ++SA +
Sbjct: 1 MPEIAEIARAVHFLRIHLVGKRIASAEAIDDANVFGKVGTTGAAVAAALTGKKVVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG I++K A T Y K+ + WP K+ KF + D
Sbjct: 61 GKYFWITLEQPPHLVMHFGMTGWIHVKNDKTAYTNYFKKMEDSEYTVWPPKFWKFHITTD 120
Query: 116 DGL--ELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+ L E++FTD RRF +VRLLN P P+ E GPD +++ D FT+ + K+
Sbjct: 121 EKLPVEIAFTDPRRFGRVRLLNCPGVDIRKHSPLVENGPDPVVDK---DRFTEEYLRGKM 177
Query: 170 T-----IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-- 222
T IKALLLDQS ISGIGNWVADE LY A++HP Q S + + I V
Sbjct: 178 TSRHVPIKALLLDQSMISGIGNWVADETLYHARVHPEQYCDDFSDSEIKKIYESICYVCN 237
Query: 223 --REALGVSLQF 232
E LG S +F
Sbjct: 238 LAVEKLGDSDEF 249
>gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864]
Length = 985
Score = 144 bits (362), Expect = 7e-32, Method: Composition-based stats.
Identities = 94/288 (32%), Positives = 129/288 (44%), Gaps = 67/288 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE+E AR + C GKK+V+ + +D V DGV+ F +G+ + R GK
Sbjct: 1 MPELPELERARNFLLLTCRGKKVVQVSVDEDTLVFDGVAPQQFAQQFVGRTVRDVKRHGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVA---VTQYKRSAVKDTDE--------------- 102
++W+ D +F FG+TG + K V + + D DE
Sbjct: 61 HIWIEFDGGSDAAFHFGLTGNFFFKSQTSGKVFKAHSGRLPDDDEASEERTQEENERIQE 120
Query: 103 -------------WPSKYSKFFVELD---------------------------------- 115
PS Y + V+ D
Sbjct: 121 KQTEQSLRSRGALTPSPYRRARVDFDYQPVDADIDASLSQSEEVHDGHWPPKDSKCEFSF 180
Query: 116 -DGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
D LSFT+ R ++R L D + PPI LG D L P+ F +L ++ + IKAL
Sbjct: 181 DDQSRLSFTNTCRLGRIRALADSWAEPPICFLGFDP-LTPVEQGAFNAALVRRNVPIKAL 239
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQS+++G+GNWVADEVLYQA IHP Q +LS E A LL I+ V
Sbjct: 240 LLDQSFLAGVGNWVADEVLYQAGIHPEQYTNTLSGEQLAALLDKIQSV 287
>gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera]
Length = 758
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 73/76 (96%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQF 76
N+WL+LDSPPFPSFQF
Sbjct: 61 NMWLQLDSPPFPSFQF 76
>gi|336271672|ref|XP_003350594.1| hypothetical protein SMAC_07911 [Sordaria macrospora k-hell]
gi|380089513|emb|CCC12612.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 416
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 132/249 (53%), Gaps = 18/249 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK + + DD V G A ++GK + K
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVVKHAEAIDDANVFGKVGTDGPKMAADLIGKRLYQQGPK 60
Query: 59 GKNLWLRLDS--PPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVE 113
+N +L PP FGMTG I+IKG A T Y K+ + D+WP KY KF +
Sbjct: 61 -ENTSGQLSQIMPPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIV 119
Query: 114 LDDGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSKK 167
++G E++FTD RRF +VR ++ P P+ E GPD + L+ T D + + +
Sbjct: 120 TEEGDEMAFTDPRRFGRVRAVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLRERMKSR 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA-- 225
++ IKALLLDQ+ ISGIGNWVADEVLYQAK+HP Q S L + I+ V +
Sbjct: 180 RVPIKALLLDQAVISGIGNWVADEVLYQAKLHPEQYCNDFSDAEIKQLYESIRYVCQTAV 239
Query: 226 --LGVSLQF 232
LG S QF
Sbjct: 240 DKLGNSDQF 248
>gi|302502465|ref|XP_003013223.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371]
gi|291176786|gb|EFE32583.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 142/284 (50%), Gaps = 38/284 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVA--------------------DEVLYQAKIHPLQTAVS 206
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGYVLHLLIYFPTTKEANAGSRDEILYHARIHPEQYSDT 238
Query: 207 LSKESCATLLKCIKEVREALGVSLQFYKCYFAKPYVHKKHRENK 250
L L I V ++ V L+ F ++ HR NK
Sbjct: 239 LRDNQIKELHSSINYVC-SVSVDLKGESSDFPTDWLF-HHRWNK 280
>gi|452988509|gb|EME88264.1| hypothetical protein MYCFIDRAFT_192478 [Pseudocercospora fijiensis
CIRAD86]
Length = 427
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 19/220 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H +G+ VKS A ++ ++ G SA F +V GK +L A +
Sbjct: 1 MPEIGEVARIVHYLRKHLVGR-TVKSCKAFNDDIVYGKVGCSADAFSKAVEGKKVLGAGQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTD--EWP--SKYSKFFVE 113
+GK +L DSPP GMTG I YK++ +D + +WP K++K+ ++
Sbjct: 60 QGKYFYLTFDSPPHSVMHLGMTGWIKFSTEETFYYKQAVEEDKEPEQWPPNEKWTKWLIK 119
Query: 114 LD-----DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLE--PMTVDEFTD 162
D + +E++F D RR ++RL++ P+ E GPD +++ +TVD ++
Sbjct: 120 CDKEGGREPVEVAFVDARRLGRIRLIDCEADKIRRESPLKENGPDPVIDKDTLTVDWLSE 179
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQ 202
L++KK+ IKALLLDQ+ ISG+GNWVADE+LYQA+IHP Q
Sbjct: 180 LLNRKKVPIKALLLDQANISGVGNWVADEILYQARIHPEQ 219
>gi|426403713|ref|YP_007022684.1| hypothetical protein Bdt_1723 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860381|gb|AFY01417.1| hypothetical protein Bdt_1723 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 288
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 14/268 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-DNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPE+ EVE RR +++ GK+I + I D D + A + + ++ G I RKG
Sbjct: 1 MPEIAEVETVRRHLDKALRGKRIKEVIYEDKDRHLFAFAPAKEVKKALEGARITGTGRKG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP----SKYS-----KF 110
K WL LD P+P F GM+G I + R+ W S++S +
Sbjct: 61 KYFWLELDRKPWPLFHLGMSGNISLLTDPSDARHRNIWGGKKLWSLEDESEHSMIWFCRL 120
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ LD +E++F+D RRF ++ L +DP P I++LG D LL+ T + L K+K +
Sbjct: 121 LLRLDKKIEMAFSDPRRFGRMWLTDDPWQHPRIAKLGFDPLLDFPTAKALYERLHKRKKS 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREALGVS 229
IK L+LDQ +GIGNW+ DE+L+QA+I P + A L+ T+ + + VR+A+ V
Sbjct: 181 IKGLMLDQGLFAGIGNWLGDEILFQARISPHRLASDLTLAEVTTIRRVTLSVVRKAIAVD 240
Query: 230 LQFYKCYFAKPYV-HKKHRENKICRLFK 256
+ + F K ++ H++ ++K + K
Sbjct: 241 ADYER--FPKTWLFHERWGKSKTAKTHK 266
>gi|449304696|gb|EMD00703.1| hypothetical protein BAUCODRAFT_153147 [Baudoinia compniacensis
UAMH 10762]
Length = 455
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 28/265 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADD---NKVIDGVSASDFEASVLGKAILSAH 56
MPE+ EV + +H +G+ I ADD KV G SA F+ G+ + A
Sbjct: 1 MPEIGEVARVVHYLRKHLVGRTINTCEAFADDIVYGKV--GCSADAFQQHATGRRVTGAD 58
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTD---EWPSKYSKFFVE 113
++GK ++ D PP FGMTG + YK++ K+ EWP KY+KF ++
Sbjct: 59 QQGKYFYMTFDKPPHAVMHFGMTGWMKFDAEETAYYKQAKEKEKGAEVEWPPKYAKFVLK 118
Query: 114 LD---------DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVD 158
+ D L+ +F D RR A++RL++ P+ E GPD + + +TV+
Sbjct: 119 CEEETVDGRKRDPLQAAFVDARRLARIRLVDCEAEKIREESPLKENGPDPVRDKDIVTVE 178
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
T+ L +KK+ +KALLLDQ+ +SG+GNWVADEVLYQA+IHP Q + + E L
Sbjct: 179 WLTELLRRKKVPVKALLLDQANLSGVGNWVADEVLYQARIHPEQYSNTFDDEQIKRLHDA 238
Query: 219 IKEV----REALGVSLQFYKCYFAK 239
+ V E L S QF + + K
Sbjct: 239 LIGVCTLAVETLADSKQFPETWLMK 263
>gi|295669486|ref|XP_002795291.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285225|gb|EEH40791.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 369
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 132/236 (55%), Gaps = 16/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-----KDTDEWPSKYSKFFVE 113
GK W+ + SPP P FGMTG + +K V Y+ A + + WPSK+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDRGEEPWPSKFWKFMLE 120
Query: 114 LDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLS 165
LDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGADIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
K++ IKALLLDQ+ ISGIGNW+ + L +++I L +A++ + LL +E
Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGN-TLQESQIEQLYSAINYVCSTSVGLLGNSEE 235
>gi|395326032|gb|EJF58446.1| hypothetical protein DICSQDRAFT_67087, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 312
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 119/223 (53%), Gaps = 6/223 (2%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
EVE A R + E GK IVK +D V ++ DF + V G+A+ R GK ++
Sbjct: 1 EVERAARLLREVAKGKIIVKVDSDEDAIVFSKITHVDFASEVSGRAVKDVQRYGKVFYVE 60
Query: 66 LDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL-----DDGLE 119
L+ P FGMTG + +KG Y+ + K + +WP K+ KF + + ++ +
Sbjct: 61 LEGDGRHPVMHFGMTGMLQVKGELPMHYREAPRKASTDWPPKFMKFVLHIQGEDDEEAQQ 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
++F D RR ++RL P + PIS LG D ++ + F + K+ IKALLLDQS
Sbjct: 121 VAFLDPRRLGRIRLCKSPLTEAPISSLGFDPIISMPDFEYFEKGVLKRACPIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +G+GNWVADE+LY A++HP + L+ + L EV
Sbjct: 181 FSAGVGNWVADEILYHARVHPEERCNVLNGDQLQALYTQTAEV 223
>gi|440479162|gb|ELQ59948.1| formamidopyrimidine-DNA glycosylase, partial [Magnaporthe oryzae
P131]
Length = 364
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 52 ILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYS 108
++S +GK W +D P GMTG +I+G A T Y K+ + D+WP KY
Sbjct: 1 VVSVGTQGKYFWFVMDKAPHLVMHLGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYW 60
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTD 162
+F +E+ DG +FTD RRF +VRL++ P + P+ E GPD +++ T +
Sbjct: 61 RFHLEVQDGTAAAFTDARRFGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLA 120
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +++ +KALLLDQ+ ISG+GNWVADEVL+QA++HP Q + S E A L I++V
Sbjct: 121 KMRSRRVPVKALLLDQAVISGVGNWVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDV 180
>gi|452848456|gb|EME50388.1| hypothetical protein DOTSEDRAFT_165590 [Dothistroma septosporum
NZE10]
Length = 433
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 17/219 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H + + I + DD+ V G +A F ++ GK + SA +
Sbjct: 1 MPEIGEVARTVHYLRKHLVSRTIKTCVPFDDDIVYGKKGGTTAKAFSDALTGKKVTSAGQ 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD-TDEWPS--KYSKFFVEL 114
+GK +L SPP GM+G I YK++ KD +EWP K++KF ++
Sbjct: 61 QGKYFYLTFSSPPHAVLHLGMSGWIKYSTEETGYYKQAKKKDEQEEWPPNPKWTKFLLKC 120
Query: 115 D-DG----LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALL--EPMTVDEFTDS 163
+ DG +E++F D RR ++ L++ P P+ E GPD ++ E +TV+ +
Sbjct: 121 EADGDREAVEVAFVDARRLGRIGLVDCPAEEIRQNSPMKENGPDPVVDKEKVTVEWLGEL 180
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQ 202
L KK++ +KALLLDQ+ ISG+GNWVADEVLYQAKIHP Q
Sbjct: 181 LGKKRVPVKALLLDQANISGVGNWVADEVLYQAKIHPEQ 219
>gi|346323545|gb|EGX93143.1| formamidopyrimidine-DNA glycosylase, putative [Cordyceps militaris
CM01]
Length = 396
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 129/246 (52%), Gaps = 15/246 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK+I + DD V G + + A++ GK ++SA +
Sbjct: 1 MPEIAEIARAVHYLRIHLVGKRIASAEAIDDANVFGKVGTTGAAVAAALKGKKVVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ L+ PP FGMTG K +K+ + WP K+ KF + DD
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGK-NDKTAYTNYFKKMEDSEYAVWPPKFWKFSIVTDDEP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E++FTD RRF +VRL++ P P+ E GPD +++ T D ++ + +
Sbjct: 120 AVEVAFTDPRRFGRVRLVDCPGEAIRKHSPLVENGPDPVVDKDRFTEDYLRGKMTSRHVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REAL 226
IKALLLDQ+ ISGIGNWVADE LY A++HP Q S L + I V E L
Sbjct: 180 IKALLLDQTMISGIGNWVADETLYHAQMHPEQYCDDFSDAEIKKLYESICYVCDLAVEKL 239
Query: 227 GVSLQF 232
G S QF
Sbjct: 240 GDSDQF 245
>gi|403414603|emb|CCM01303.1| predicted protein [Fibroporia radiculosa]
Length = 2387
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
+VE A R I + KI+K +D+ V G S ++F +++ + + + R GK +++
Sbjct: 2159 QVERAVRLIRDVAQDTKIIKVDTNEDSLVFSGTSHTEFADTIVNRTVTTVGRYGKVFYMQ 2218
Query: 66 LDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKY--SKFFVELDDGL---- 118
LD P FGMTG + +KG T YK + K + +WP ++ ++F + L+D +
Sbjct: 2219 LDGAGRVPVLHFGMTGMLQVKGQLATYYKETPRKASTDWPPRFMKTQFILHLNDPVSNSI 2278
Query: 119 -ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
EL+F D RR ++RL P + PPIS LG D +L T+ EF + + K+ IKALLLD
Sbjct: 2279 TELAFLDARRLGRIRLCTSPLTEPPISALGFDPILSMPTLQEFANGVRKRTCPIKALLLD 2338
Query: 178 QSYISGIGNWVADEVLY 194
QS+ +G+GNWVA + ++
Sbjct: 2339 QSFSAGVGNWVAGKSIH 2355
>gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
Length = 1230
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 22/225 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ ++ + +GK I +D+ + G SAS F+ ++ GK IL A ++
Sbjct: 1 MPEIAEISRIVHYLKRYVVGKTIGAVKTQEDDIIYGKVGTSASAFQKAMTGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK WL +DS P FGM+G + + Y R A + +EWP +Y KF +E+ D
Sbjct: 61 GKYFWLVMDSQPHALMHFGMSGWMKFSNDD-SAYYRPAKAEEEEWPPRYWKFVLEMKEDP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E++F D RR A++RL++ D + P+ E GPD +L+ +TV+ L K
Sbjct: 120 KIEVAFVDPRRLARIRLVDAKAEDMRNTTPLKENGPDPVLDKDVLTVEWLGKKLRKT--- 176
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
S ISGIGNWV DE++YQAK+HP Q + + S E L
Sbjct: 177 --------SNISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQIKQL 213
>gi|302659016|ref|XP_003021203.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517]
gi|291185091|gb|EFE40585.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517]
Length = 373
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 17/220 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENFEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVS 206
KK+ IKALLLDQ+ ISG+GNW+ D L ++I L ++++
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGD-TLRDSQIKELHSSIN 217
>gi|302695915|ref|XP_003037636.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8]
gi|300111333|gb|EFJ02734.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8]
Length = 267
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 90/145 (62%)
Query: 78 MTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDP 137
MTG I +KG A T Y S DEWP ++ KF + DG +L+F D RR ++RL DP
Sbjct: 1 MTGMIQVKGSAATYYISSKRLVGDEWPPRFMKFILHFFDGTQLAFMDARRLGRIRLCADP 60
Query: 138 TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAK 197
PISELG D +L + +F ++++K +KALLLDQS+ +G+GNWVADE+LY A+
Sbjct: 61 LHETPISELGFDPILSMPSRQDFEKLMTRRKCPVKALLLDQSFSAGVGNWVADEILYHAR 120
Query: 198 IHPLQTAVSLSKESCATLLKCIKEV 222
+HP + +L+ E L + + EV
Sbjct: 121 VHPERRCNTLTGEELDGLHRWMGEV 145
>gi|453089484|gb|EMF17524.1| Fapy_DNA_glyco-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 460
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 23/276 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H + + I +D V G A+ F + G+ ++ A +
Sbjct: 1 MPEIGEVARMVHYLRKHLVNRTIATCQAFEDAIVYGKKGGTDANAFSKHLKGRKVVGAGQ 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT--DEWPS--KYSKFFVE 113
+GK ++ LD PP GMTG I YKR+ D + WP K++K+ ++
Sbjct: 61 QGKYFYITLDKPPHSVMHLGMTGWIKCSVEETAYYKRAKEDDKMPEAWPPEPKWTKWLIK 120
Query: 114 LD-----DGLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTD 162
D + +EL+F D RR ++ L++ D + P+ E GPD ++ +TV+ +
Sbjct: 121 CDAEGDREAVELAFVDARRLGRISLVDCEADDIRNHSPLKENGPDPFIDKDIVTVEWLSK 180
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+KK + +KALLL+QS +SGIGNWVADE+L+QAK+HP Q + + ++ L + +V
Sbjct: 181 LLNKKTVPVKALLLNQSNLSGIGNWVADEILFQAKLHPEQYSNTFDQQQIQQLHAALMDV 240
Query: 223 R----EALGVSLQFYKCYFAKPYVHKKHRENKICRL 254
E L S QF + + + Y K ++ + +L
Sbjct: 241 TTIACETLADSSQFPETWLMR-YRWDKGKKGDVNKL 275
>gi|296132484|ref|YP_003639731.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR]
gi|296031062|gb|ADG81830.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR]
Length = 275
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R++EE +GK I I D KVI S +F+ + G+ IL+ R+GK
Sbjct: 1 MPELPEVETVKRSLEEKLLGKSIQHVDIFMD-KVIKEPSVEEFQQILAGREILNLGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L F MTG + +R+AV+ +K++ L D EL
Sbjct: 60 YLLLYLSGGYAIVFHLRMTGQLIYS-------ERTAVR------AKHTHLVFHLSDDNEL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD+R+F +V LL D + + +G + L E T + L +K+ IKALLLDQ
Sbjct: 107 RFTDQRQFGRVYLLPDDQLDKITGLRTMGVEPLTEEFTKEFLKKELKRKRTKIKALLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++I+GIGN ADE L++AKI+P + A +L++ + L + I EV E G S++ Y
Sbjct: 167 TFIAGIGNIYADEALFRAKINPERLASTLNQREISRLHRAIVEVLTEGIENRGTSIKDY 225
>gi|452822651|gb|EME29668.1| formamidopyrimidine-DNA glycosylase isoform 2 [Galdieria
sulphuraria]
Length = 389
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 144/265 (54%), Gaps = 19/265 (7%)
Query: 1 MPELPEVEAARRAIEEH-CIGKKIVKSI-IADDNKVI---DGVSASDFEASVLGKAILSA 55
MPEL +VE R+ I+EH + +V++I + D + +S V+ K ++
Sbjct: 1 MPELIQVEYFRQFIQEHLSLDTAVVENIYFSQDASSLFPKGHISMETIPIQVVHKKVIRV 60
Query: 56 HRKGKNLWLRLDSPP-FPSFQFGMTGAI-------YIKGVAVTQYKRSAVKDTDEWPSKY 107
R GK LWL L SP + F FGM+G++ ++ V ++ S ++ EWPS+Y
Sbjct: 61 QRYGKYLWLELSSPVVYIIFHFGMSGSLAHRKTDGSLEFAHVGKHYSSLIQ---EWPSQY 117
Query: 108 SKFFVELDDGLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
+K + DG EL+F + R++ KV P + I+ LG D +L T+ E D +
Sbjct: 118 AKLRLVFQDGSELAFLETRKWGKVVFTEQSPMQLSYITCLGFDPILSNPTIQELYDKIQS 177
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
K IK +LL+ S I+GIGNW+ADE+LY++KIHPL+ A LS +L + K+V +
Sbjct: 178 YKSAIKTVLLNGSVIAGIGNWMADEILYKSKIHPLEWACLLSLNDVESLWEATKQVVQQ- 236
Query: 227 GVSLQFYKCYFAKPYV-HKKHRENK 250
GV ++ F K ++ H + +++K
Sbjct: 237 GVRVRANSDEFPKDWLFHLRWKKDK 261
>gi|392597060|gb|EIW86382.1| S13-like H2TH domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 293
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELS-----FTDK 125
P FGMTG + I+G QYK S K T+EWP ++ KF + L D + S F D
Sbjct: 1 MPVLHFGMTGMLQIRGQPTLQYKASKHKHTEEWPPRFMKFAIHLVDTEDRSEAVVAFCDA 60
Query: 126 RRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIG 185
RR ++RL P PISELG D +L +++F S++++ +KALLLDQS+ +G+G
Sbjct: 61 RRLGRIRLAASPLKEAPISELGFDPILSMPALEKFAASVTRRSCPVKALLLDQSFSAGVG 120
Query: 186 NWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
N++ADE+LY A+IHP Q LS A+L I EV
Sbjct: 121 NYLADEILYHARIHPEQRINQLSIAQLASLHLQISEV 157
>gi|398410976|ref|XP_003856834.1| hypothetical protein MYCGRDRAFT_34505, partial [Zymoseptoria
tritici IPO323]
gi|339476719|gb|EGP91810.1| hypothetical protein MYCGRDRAFT_34505 [Zymoseptoria tritici IPO323]
Length = 383
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 130/237 (54%), Gaps = 19/237 (8%)
Query: 3 ELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGK 60
++ EV + +H + + I DD+ V G +A+ F + GK + A ++GK
Sbjct: 1 QIGEVARIVHYLRKHLVNRTIASCQGFDDDIVYGKVGCTATAFSQAFTGKRVSLAGQQGK 60
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD---TDEWPSKYSKFFVELD- 115
+L L +S GMTG I + T Y R KD T+EWP KY K+ +++D
Sbjct: 61 YFYLTLAESKVHSVLHLGMTGWIKFN-IEETGYYRQG-KDKPVTEEWPPKYVKWLMKIDA 118
Query: 116 ----DGLELSFTDKRRFAKVRLL----NDPTSVPPISELGPDALLEP--MTVDEFTDSLS 165
+ LE++F D RR A++RL+ + V P+ E GPD +++ +T++ T +
Sbjct: 119 EGEREALEVAFVDPRRLARIRLVECEAGEIRRVSPLKENGPDPVIDKDIVTLEWMTALMR 178
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+KK+ +K LLLDQ+ ISG+GNWVADEVLYQA++HP Q + + S E L + EV
Sbjct: 179 RKKVPVKGLLLDQANISGVGNWVADEVLYQARLHPEQYSNTFSDEEIGRLRDALLEV 235
>gi|322698696|gb|EFY90464.1| formamidopyrimidine-DNA glycosylase [Metarhizium acridum CQMa 102]
Length = 305
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 21/185 (11%)
Query: 66 LDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG--LEL 120
+D PP FGMTG ++I+G A T Y K++ + WP K+ KF ++ + +E+
Sbjct: 1 MDKPPHLVMHFGMTGWVHIRGEQTAYTNYYKKTKDSELKNWPPKFWKFQIKTEGKPEVEV 60
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS-----LSKKKITI 171
+FTD RRF +VRL++ P + P+ E GPD +++ D FT+ + + + +
Sbjct: 61 AFTDARRFGRVRLVDCPGADIRKYTPLKENGPDPVID---TDRFTEEYLRGKMQARHVPV 117
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA----LG 227
KALLLDQ+ ISGIGNWVADE LYQAK+HP Q + S S L +CI+ V + LG
Sbjct: 118 KALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAEIKKLYECIRYVCQTAVDKLG 177
Query: 228 VSLQF 232
S QF
Sbjct: 178 DSDQF 182
>gi|380486925|emb|CCF38377.1| formamidopyrimidine-DNA glycosylase [Colletotrichum higginsianum]
Length = 475
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 57/276 (20%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWL------- 64
+ H +GKKI K DD V G S FE +V G+ ++S +GK W
Sbjct: 24 LRRHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKAVKGRKVVSVGSQGKYFWYVFRPRIP 83
Query: 65 ----------------------------RLDSPPFPSFQFGM-----TGAIYIKG--VAV 89
R ++P P + G I+IKG A
Sbjct: 84 VHVGGSPAHESQDNLRQTASCGDALGHDRYEAPVAPPALLCLRADIAQGWIHIKGDKTAY 143
Query: 90 TQY-KRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKRRFAKVRLLNDPTS----VPP 142
T Y K+ + D WP KY KF +E DD + +FTD RRF ++RL+N P + P
Sbjct: 144 TNYYKKMKDGEADVWPPKYWKFQLETDDDPPVAAAFTDPRRFGRIRLVNCPGADIRNHSP 203
Query: 143 ISELGPDALLEPMTVDE--FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHP 200
+ E GPD +++ E F D + + + +KALLLDQS+ISGIGNWVADEVLYQ+++HP
Sbjct: 204 LKENGPDPVVDADVFTEAYFCDKMRSRHVPVKALLLDQSHISGIGNWVADEVLYQSRLHP 263
Query: 201 LQTAVSLSKESCATLLKCIKEVREA----LGVSLQF 232
Q + ++ L + ++ V + LG S +F
Sbjct: 264 EQYCDTFAEAESRRLYEAVRYVCQTAVDKLGDSDEF 299
>gi|363581745|ref|ZP_09314555.1| DNA-formamidopyrimidine glycosylase [Flavobacteriaceae bacterium
HQM9]
Length = 261
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 18/248 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV ++ IE C+ +KI+ D + + A FE+++LG+ + R GK
Sbjct: 1 MPELPEVHGYQQYIENTCLHQKIIGFDCRDTRLLKQPLVA--FESNLLGETFIGTQRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+++ FGMTG YK + V+ K+ + ++G
Sbjct: 59 YLFIKTSGFKTLLMHFGMTGK-------PNYYKEAEVR------PKFGHIVLTFENGFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F + L++ TS +L DA +T+ EF ++SK+K IK +L+DQS
Sbjct: 106 AFENKRKFGRWDLVDSITSYQKDHKLSKDA--RDLTLQEFITAVSKRKTAIKKVLMDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
+G+GNW+AD+VLYQA+IHP + LS E + ++ V E + L+ + F +
Sbjct: 164 AAGVGNWIADDVLYQAQIHPEKKVTELSNEDLKNIYLKLQYVLET-AIELEAHYADFPEQ 222
Query: 241 YVHKKHRE 248
++ K+ RE
Sbjct: 223 FMVKRRRE 230
>gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
Length = 274
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++E G KI K II + K++ F V G ++ R+GK
Sbjct: 1 MPELPEVETVVRGLKELIKGVKINKVIIRE-TKLLVYPDPDTFIDLVEGSRVIDVLRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ ++LD+ F F MTG + + Y+R+ D K++ F EL+DG +L
Sbjct: 60 YILIKLDNNRFLVFHLKMTGQLVV-------YERNNKYD------KHTHFVFELEDGRDL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F + R+F +V L+ + +++LGP+ L + TVDEF D + ++K IK LLL+Q
Sbjct: 107 RFNNMRKFGRVYLVTKGEFDKAGSLADLGPEPLSDEFTVDEFADIIKRRKGNIKGLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+I+G+GN ADE L++A I P + A SL L I++V + +G+ Y
Sbjct: 167 KFIAGLGNIYADEALFEAGISPERKADSLDDSEIERLYHAIRKVLK-MGIK---YGGTSM 222
Query: 239 KPYVHKKHR 247
K YV+ + R
Sbjct: 223 KDYVNARGR 231
>gi|358056002|dbj|GAA98347.1| hypothetical protein E5Q_05032 [Mixia osmundae IAM 14324]
Length = 765
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 11/233 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL EVE AR +E +GK I + +D V + +DF A +L + + R GK
Sbjct: 375 MPELAEVERARGILERVSLGKTITQCQTLEDTIVYADATHTDFAAELLDRRVELVGRTGK 434
Query: 61 NLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFV 112
++ L P P+ + FGM+GA I+G Y++ D WP ++ K +
Sbjct: 435 QFYMVLSHPSKPTVSALWHFGMSGACQIRGEESNYYRKKPKNELNSDGAPWPPRFWKACL 494
Query: 113 ELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
DDG E +F D RR ++RL+ +DP PP+S L PDALL+ V EF +L K+
Sbjct: 495 TFDDGSEWAFMDARRLGRIRLIRDSDPRLHPPMSLLAPDALLDLPPVPEFATALRKRTAP 554
Query: 171 IKALLLDQS-YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+KA+LLDQ+ +SG+GNW+ DE YQ++IHP Q +L + L + I+ V
Sbjct: 555 VKAILLDQNGVVSGLGNWLVDEFFYQSRIHPGQRGATLHDDQIEALHETIRYV 607
>gi|443926162|gb|ELU44885.1| AtMMH-1 [Rhizoctonia solani AG-1 IA]
Length = 726
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 31/274 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDF--EA---------SVL 48
MPELP VE A + +G+ I K +D V G++ +F EA +
Sbjct: 306 MPELPGVERAAKLTRHVAVGRTIDKVETLEDTIVYTGGITHDEFAIEADGLWRRQAKEIT 365
Query: 49 GKAILSAHRKGKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-K 106
G+ +L R GK ++ L+ P P GMT + + +R+ D WP +
Sbjct: 366 GRKVLDVGRYGKVFYIVLEGPGRMPVLHLGMTEPTWYR-------RRNKDLSADVWPPPR 418
Query: 107 YSKFFV-----ELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT 161
+ KF + + +L+F D RR A++RL +DP PISELG D +L +DEF
Sbjct: 419 FLKFIMHFSATDTQPPTQLAFIDARRLARIRLAHDPLKEHPISELGFDPILSMPELDEFK 478
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK---ESCATLLKC 218
+ K+ +KALLLDQS+ +G+GNWVADE+L+Q++IHP Q A +LS+ + T K
Sbjct: 479 ALVVKRTCPVKALLLDQSFSAGVGNWVADEILFQSRIHPEQRASTLSEAQLQEMYTQTKS 538
Query: 219 IKEVREALGV-SLQFYKCYFAKPYVHKKHRENKI 251
+ ++ A+ S QF K + K Y K +NK
Sbjct: 539 VCDIAVAVNADSSQFPKDWLFK-YRWGKGEKNKT 571
>gi|269836816|ref|YP_003319044.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
gi|269786079|gb|ACZ38222.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
Length = 278
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 122/262 (46%), Gaps = 23/262 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I + I F A V G+ I R+GK
Sbjct: 1 MPELPEVENVRRSLTAAVDGTTIAAVRLGAFTGCIAAPEPDAFVARVTGRRITDFGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LDS + MTG + V D K+ LDDG EL
Sbjct: 61 YLLIALDSGDTIAVHLRMTGEL-------------TVTSPDTPTGKHHHLTFVLDDGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F+D R+F ++ LL + LGP+ L + T + F L+ + +K LLLDQ++
Sbjct: 108 RFSDTRKFGRLTLLTPDEAAALDRSLGPEPLDDRFTAERFAAMLAARSRAVKPLLLDQTF 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQFYKCY 236
++G+GN ADE L+ A+IHPL+ A SL+ + A LL I+ A G +L+ Y+
Sbjct: 168 LAGVGNIYADEALFAARIHPLRPANSLTLDEAARLLDSIRVTLAAAIERGGTTLRDYRDG 227
Query: 237 FAKP-----YVHKKHR-ENKIC 252
+P Y++ HR E C
Sbjct: 228 LGRPGNNQHYLNIYHRAEGDPC 249
>gi|410668136|ref|YP_006920507.1| formamidopyrimidine-DNA glycosylase MutM [Thermacetogenium phaeum
DSM 12270]
gi|409105883|gb|AFV12008.1| formamidopyrimidine-DNA glycosylase MutM [Thermacetogenium phaeum
DSM 12270]
Length = 274
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++E + +I + + + K + F A + G+ I R+GK
Sbjct: 1 MPELPEVETIVRSLEGKIVNHRIRRVEVLSE-KAVKTPEIGLFVARLEGQRITGVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L +R+ S MTG R + D +Y+ +LD+G E+
Sbjct: 60 HLLIRIGSSWVLVIHLRMTG-------------RLIYTEADSPSDRYTHVIFQLDNGGEI 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF + LL + + P + LGPDAL +T D F L ++ IK LLLDQ
Sbjct: 107 RFHDVRRFGTIHLLTNEEAERFPSLCSLGPDALDPELTRDVFKRRLKGRRGQIKNLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
S+ISGIGN A+E+L++A++HP ++ SLS + + ++EV
Sbjct: 167 SFISGIGNIYANEILWKARVHPERSVDSLSSREQGMIYRAMREV 210
>gi|19553271|ref|NP_601273.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|161486717|ref|YP_226310.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|24211704|sp|Q8NNV7.3|FPG_CORGL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|21324843|dbj|BAB99466.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|385144174|emb|CCH25213.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
K051]
Length = 286
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 130/262 (49%), Gaps = 40/262 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ VELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKVELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR---- 223
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKAL 224
Query: 224 -------EALGVSLQFYKCYFA 238
+AL V++ YFA
Sbjct: 225 AQGGTSFDALYVNVNGNSGYFA 246
>gi|336387319|gb|EGO28464.1| hypothetical protein SERLADRAFT_458886 [Serpula lacrymans var.
lacrymans S7.9]
Length = 289
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG----------LEL 120
P F FGMTG + +KG Y +S V WP ++ KF + L DG +L
Sbjct: 1 MPVFHFGMTGMLQVKGQPCLHYGKSEV-----WPPRFMKFVLYLRDGDDHDGSNPAITQL 55
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F+D RR ++RL P + PPI +LG D +L ++ F + K+ IKALLLDQS+
Sbjct: 56 AFSDARRLGRIRLSTSPLTEPPIVDLGFDPILSMPSLSVFNALVQKRTCPIKALLLDQSF 115
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+G+GN++ADE+LY A++HP Q SLS + A L I +V
Sbjct: 116 SAGVGNYLADEILYHARVHPEQRCRSLSDDQTAALHHQIADV 157
>gi|383826401|ref|ZP_09981528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium xenopi RIVM700367]
gi|383332701|gb|EID11176.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium xenopi RIVM700367]
Length = 285
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 127/271 (46%), Gaps = 34/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQTHVVGKAITAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWLRLD GM+G + + + T + R A LDDG
Sbjct: 61 KYLWLRLDDADTALVVHLGMSGQMLLGAIPNTAHLRIAAV---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D ++VP P++ L D L D + + +K +K
Sbjct: 106 RLSFVDQRTFGGWLLADLVTVDGSAVPVPVAHLARDPLDPKFDADAVVNVMRRKHSELKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ+ +SGIGN ADE L++AK+H + A +L + A +L+ +V R+AL
Sbjct: 166 QLLDQTVVSGIGNIYADEALWRAKVHGSRLAAALPRRQLAVVLQAAADVMRDALAHGGTS 225
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + REN+ CR
Sbjct: 226 FDSLYVNVNGESGYFNRS-LDAYGRENQPCR 255
>gi|145296036|ref|YP_001138857.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum R]
gi|417970864|ref|ZP_12611793.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum S9114]
gi|166215621|sp|A4QFD9.1|FPG_CORGB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|140845956|dbj|BAF54955.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044744|gb|EGV40419.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum S9114]
Length = 286
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 121/235 (51%), Gaps = 29/235 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ +ELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKIELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDV 219
>gi|331695858|ref|YP_004332097.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans
CB1190]
gi|326950547|gb|AEA24244.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans
CB1190]
Length = 268
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ARR +E H + ++IV ++ D V + + ++G + +AHR+GK
Sbjct: 1 MPELPEVESARRVLE-HALDRRIV-AVDDTDEWVCRPHPPGEIASVLVGGTLTAAHRRGK 58
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
+W D P GM G + + + D + ++++F V D
Sbjct: 59 AMWCETRDEHGDDGPHLGLHLGMGGHLVVTDADDVRAGGDPRPDGSQGRPEWNRFTVTFD 118
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
DG EL DKRR +VRL P I LGPDA E +T + L + +KA L
Sbjct: 119 DGGELRLFDKRRLGRVRL------DPDIDALGPDA--EEITAAGLRERLRRSHAPVKARL 170
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKC 235
LDQ ++GIGN +ADE L+QA+I P + A L + L + ++ AL +++
Sbjct: 171 LDQKVVAGIGNLLADETLWQARIAPSRPADELDRTEVNRLHRNLE---RALRSAIEKGGV 227
Query: 236 YFAKPYVHKK 245
+ + H++
Sbjct: 228 HTGRVIAHRR 237
>gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
VaMs.102]
gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
VaMs.102]
Length = 390
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 126/249 (50%), Gaps = 43/249 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +G+ I K+ +D+KV G S FE +V G+
Sbjct: 1 MPEIAEVARCVHFLRHHLVGRTIAKATAPEDDKVFGKVGTSGPAFEKAVQGRK------- 53
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
+P G ++IKG A T Y K+ ++ D WP KY KF +E +
Sbjct: 54 ------------YP-------GWVHIKGDKTAYTNYYKKMKPEEADLWPPKYWKFRLETE 94
Query: 116 DG--LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKK 167
+E++FTD RRF +VRL++ P P+ E GPD +++ T + ++ +
Sbjct: 95 GTPKVEVAFTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSR 154
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA-- 225
+ IKALLLDQ++ISGIGNWVADEVLYQA +HP Q S + + ++ V +
Sbjct: 155 HVPIKALLLDQTHISGIGNWVADEVLYQANVHPEQYCDDFSDREIKAIYEKVRYVCQTAV 214
Query: 226 --LGVSLQF 232
LG S +F
Sbjct: 215 DKLGDSDEF 223
>gi|306490892|gb|ADM95010.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 8/222 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I KKI K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKEVINKKINK-IKLNLPRLIKTPTIDEFSRRLKGTYIKKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+S F GM+G + + +T +++ D ++ K+ F +D +
Sbjct: 60 YILCFLNSGECLVFHLGMSGCLLYEKNNLT----ASISDINK---KHHHVFFFFEDDTTM 112
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F K+ LLN + + LG + L E T +EF+ + KK IK+L+++Q Y
Sbjct: 113 IYNDIRQFGKIWLLNKNEKLAEVDSLGLEPLEEQFTFNEFSRIIENKKGNIKSLIMNQKY 172
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+GIGN A+E+L+QA IHPL+ + SL+ L I++
Sbjct: 173 IAGIGNIYANEILFQAGIHPLRRSDSLTTHEIKKLYYSIQDT 214
>gi|413943562|gb|AFW76211.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 106
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV 97
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKR +
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRQVI 98
>gi|418245589|ref|ZP_12871994.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum ATCC 14067]
gi|354510500|gb|EHE83424.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum ATCC 14067]
Length = 286
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 129/262 (49%), Gaps = 40/262 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE R +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRHGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ VELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKVELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR---- 223
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKAL 224
Query: 224 -------EALGVSLQFYKCYFA 238
+AL V++ YFA
Sbjct: 225 AQGGTSFDALYVNVNGNSGYFA 246
>gi|342879494|gb|EGU80741.1| hypothetical protein FOXB_08781 [Fusarium oxysporum Fo5176]
Length = 376
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 14/236 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+IV + DD V G S + E ++ GK + + +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIDDKNVFGKVGTSGEEVETALKGKKVRNCLLQ 60
Query: 59 -GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFF--V 112
N + LD + + ++IK A T Y K+ + ++WP K+ KF
Sbjct: 61 VALNKLIILDRFRRKPGEILLASWMHIKDEQTAYTNYYKKMKEGEHEQWPPKFWKFQFKT 120
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSK 166
E G+E++FTD RRF +VRL++ P P+ E GPD +++ T D +
Sbjct: 121 EGSPGIEVAFTDARRFGRVRLVDCPGDQIRKHSPLVENGPDPVVDHDRFTEDYLRSKMRA 180
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q + ATL + I+ V
Sbjct: 181 RHVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDQFNDAQIATLYEMIRYV 236
>gi|390557794|ref|ZP_10243197.1| Formamidopyrimidine-DNA glycosylase [Nitrolancetus hollandicus Lb]
gi|390174635|emb|CCF82486.1| Formamidopyrimidine-DNA glycosylase [Nitrolancetus hollandicus Lb]
Length = 277
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 20/251 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+++ I + + G+ SDF+ SV G + + R+GK
Sbjct: 1 MPELPEVETIRKSLTA-IQSATITGVVFGTFTGCLAGMEPSDFQQSVTGCRVETIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L S + MTG + I D S + F + L+ EL
Sbjct: 60 YLLLGLSSGDTIAVHLRMTGELTIV-------------DAGTPLSPHHHFTLTLNCEREL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F ++RL+ DP + + LGP+ L + +T D F L ++ IK LLLDQ
Sbjct: 107 RFRDTRKFGRIRLM-DPEGLAELGRSLGPEPLGKELTPDRFAAMLRNRRRAIKPLLLDQK 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+I+GIGN ADE L+ A IHPL+ A SL + LL I++V E G +++ Y+
Sbjct: 166 FIAGIGNIYADEALFAAGIHPLRPADSLDEGEAQGLLDAIRQVLYGAIERNGTTIRDYRN 225
Query: 236 YFAKPYVHKKH 246
+P ++ +
Sbjct: 226 GLGQPGTNQDY 236
>gi|408674493|ref|YP_006874241.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Emticicia oligotrophica DSM 17448]
gi|387856117|gb|AFK04214.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Emticicia oligotrophica DSM 17448]
Length = 267
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 125/225 (55%), Gaps = 23/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFE---ASVLGKAILSAHR 57
MPELPEVE RR EE + + I + +D K++ +D++ + K + R
Sbjct: 1 MPELPEVETYRRYFEETSLFQPIA-DVFVEDTKLL----TTDYDLLIEKLRNKQFIGTKR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GKNL+++LD+P + F FGMTG + + +D ++ P ++++ + +G
Sbjct: 56 IGKNLFIQLDAPYWLHFHFGMTGDL------------AYFRDEEDTP-RFARIVFKFANG 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+L F R+F ++ ++ + ++ DAL ++++E +L KK IK++LLD
Sbjct: 103 FKLGFLCPRKFERIGIVENIEEYLLKKKINKDAL--EISIEELAKTLKKKNAPIKSVLLD 160
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
QS ++GIGNW+ D+VL+QAKIHP +++ LS + + + IK V
Sbjct: 161 QSTVAGIGNWIVDDVLFQAKIHPERSSNQLSNQKIIDIHQAIKLV 205
>gi|148656079|ref|YP_001276284.1| formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1]
gi|166198744|sp|A5UUN1.1|FPG_ROSS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|148568189|gb|ABQ90334.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Roseiflexus sp. RS-1]
Length = 273
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ +G +IV+ D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V+ D P K++ + LDDG ++
Sbjct: 61 WILLFLDGGWTLALHLRMSGSL-------------TVQPADAPPDKHTHLVLRLDDGRQV 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L TV+ + L +K IK LLLDQ+
Sbjct: 108 FFRDPRKFGRARLLDADGRAALDAAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK-EVREAL---GVSLQFYKCY 236
I+GIGN ADE L++A+IHPL+ A LS + A L I+ +R+AL G +L+ Y+
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPASDLSADEVAALHDGIRAALRQALTNGGSTLRDYRNS 227
Query: 237 FAKPYVHKKH-----RENKIC 252
+ ++ H RE + C
Sbjct: 228 YGTRGTNQDHFNAYDREGQPC 248
>gi|159897723|ref|YP_001543970.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus DSM
785]
gi|238687075|sp|A9B0X2.1|FPG_HERA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|159890762|gb|ABX03842.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus DSM
785]
Length = 273
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 24/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ +G+ V K++D S F ++ + I R+ K
Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ MTG + + DE +++ V LD+G EL
Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVAA-------------DEPADRHTHVVVALDNGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F + L+ D + V +++ LGP+ L + T+D+F LS+K IK LLDQS
Sbjct: 108 RFHDPRKFGRWSLV-DRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQS 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
++G+GN ADE L+ AKIHPL++A SL+ A L + IK V E G +L Y+
Sbjct: 167 VLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIEHRGTTLVNYRD 226
Query: 236 YFAKPYVHKKH-----RENKICR 253
+ ++ H R + CR
Sbjct: 227 AYGASGENQYHLEAYGRTGEPCR 249
>gi|108804620|ref|YP_644557.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM
9941]
gi|108765863|gb|ABG04745.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM
9941]
Length = 265
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 29/258 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE + +E +G++I + + D +V+ VSA ++ G+++ HR GK
Sbjct: 1 MPELPDVEVLKGRLERTSLGRRISR-VEVRDGRVVGEVSARGLREALEGRSLRRVHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NL+ ++ + FGM G + S + T+E P + + + D G L
Sbjct: 60 NLFAGVEGGGWVLMHFGMAGGL------------SHLPGTEEEPP-HVRLLLGFDGGDRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+FTD+R +V + DP S LGPDAL + F + L ++ +K++L++Q
Sbjct: 107 AFTDRRALGRVHPIRDPESFVREKGLGPDALR--VDYPSFRERLGGRRGAVKSVLMNQGV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
++G+GN +DEVL++A++HP A L +E I+ + EA G LQ A P
Sbjct: 165 VAGLGNIYSDEVLFRARLHPRTGADRLGEED-------IRRLFEATGGVLQTAIDRGADP 217
Query: 241 ------YVHKKHRENKIC 252
++ + RE C
Sbjct: 218 EALPGSFLLPRRREGARC 235
>gi|154311839|ref|XP_001555248.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10]
Length = 381
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 42/226 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I + +GK + DD V G SA++F+ ++ GK + A ++
Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVEL--D 115
GK W S +D +E WP ++SKF ++ +
Sbjct: 61 GKYFW-------------------------------SKNEDEEEVWPPRFSKFSLQTAGE 89
Query: 116 DGLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
+E +FTD RRF+++RL+N P+ E GPD +L+ +T + L+KK++
Sbjct: 90 PKVEAAFTDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQV 149
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
IKALLLDQ+ ISGIGNWV DE+LY A++HP Q + + + E L
Sbjct: 150 PIKALLLDQANISGIGNWVGDEILYNARLHPEQYSNTFTSEEIKRL 195
>gi|332638559|ref|ZP_08417422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella cibaria KACC 11862]
Length = 277
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 20/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + + K +DG+S +F+A + G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLTRLVVGRTVQGTAVWWE-KTVDGLSPEEFDAELAGRRIEAIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F GMT +++ + Y A + P K+ LDDG++L
Sbjct: 60 YLLFR--------FSGGMTMVSHLR-MEGAYYTVPAGTE----PGKHDLVTFHLDDGIDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ D + V ++++GP+ +++ K ++ +K LLDQ
Sbjct: 107 LYRDTRKFGRMKLVPDAEALQVAGLAKIGPEPTESTLSLAYMVAEFGKSRMHVKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFYK 234
S+I+G+GN DE L+Q+KIHPL A LS++ A L I E G ++ +
Sbjct: 167 SHIAGLGNIYVDETLWQSKIHPLTPANKLSEDELAVLRDNIIAELARATEHHGTTVHSFT 226
Query: 235 CYFAK 239
F +
Sbjct: 227 TAFGE 231
>gi|25028531|ref|NP_738585.1| formamidopyrimidine-DNA glycosylase [Corynebacterium efficiens
YS-314]
gi|259507586|ref|ZP_05750486.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens
YS-314]
gi|29611717|sp|Q8FP17.3|FPG_COREF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|23493816|dbj|BAC18785.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium
efficiens YS-314]
gi|259164765|gb|EEW49319.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens
YS-314]
Length = 285
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 22/231 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ IV + + + ++ EA++ G + + +R+G
Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60
Query: 60 KNLWLRLD--SPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD + PS GM+G + VK D + + +
Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQML-------------VKSPDATLNPHLRARA 107
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
ELDDG E+ F D+R F L VP +S + D L + + + L K I
Sbjct: 108 ELDDGNEVWFVDQRTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLL+Q +SGIGN ADE+L++A IHP Q A +S LL+ +EV
Sbjct: 168 KRLLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREV 218
>gi|332664166|ref|YP_004446954.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter
hydrossis DSM 1100]
gi|332332980|gb|AEE50081.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter
hydrossis DSM 1100]
Length = 258
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 16/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV +R +E + ++I + + DD K+I + + F + G+ ++R+GK
Sbjct: 1 MPELPEVNTFQRYFDESALQQRIARVDVHDD-KIIRNMDGASFAERLHGRTFTGSYRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+ +LD+ FGMTG I +D + P K+ +F D+G +L
Sbjct: 60 YLFAQLDNGHHVLLHFGMTGDI------------KYYEDPIDKP-KHERFAFVFDNGFQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+FA++ L D + LG DAL ++ +F +S KK +KA LL Q
Sbjct: 107 GFDDPRKFARILYLEDLQAYIDSLPLGEDAL--RISEADFLQLISNKKGQLKAFLLQQQN 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCY 236
++G+GN ADE+ YQ +IHP SLS E L ++++ +YK Y
Sbjct: 165 LAGVGNLYADELCYQTRIHPAARIESLSLEDKKLLFTTLQKILNYAVERRAYYKDY 220
>gi|407718772|ref|YP_006796177.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc carnosum JB16]
gi|407242528|gb|AFT82178.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc carnosum JB16]
Length = 277
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG +I K I KVI G S + F VL + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGARITKVTIPYP-KVITGDSQA-FTTGVLNAQFTAIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL S Q + + ++G QY +V+ D P K+++ ELD L
Sbjct: 59 YLLLRL------SNQHTIVSHLRMEG----QY---SVEPIDAAPRKHTEIIFELDGQRVL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LG + E +T+ S+ K +K+ LLD
Sbjct: 106 FYNDTRRFGRMVLTTTGHESIEAPSLAKLGKEPTEESLTLAYMVAVFSRSKKPVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
Q+ I+GIGN ADEVL+Q+KIHP A LS+ A L K I
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPANQLSEVELAILRKNI 207
>gi|338211023|ref|YP_004655074.1| DNA-formamidopyrimidine glycosylase [Runella slithyformis DSM
19594]
gi|336304840|gb|AEI47942.1| DNA-formamidopyrimidine glycosylase [Runella slithyformis DSM
19594]
Length = 271
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 118/225 (52%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR E + + I ++I +D K++ A+ E ++G+ +S R GK
Sbjct: 1 MPELPEVETYRRYFEATSLHQPI-EAIEVEDRKLLTTDYATLTEM-LIGQTFVSTKRVGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NL++ D P FGMTG + +Y S++ ++++ G L
Sbjct: 59 NLFIYTDGGPTLHMHFGMTGDL--------EYYHSSLDR-----PRHARIVFVFASGFHL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F R+F ++ L+ + ++ PDAL ++V+E T +L K+K IK +LLDQS
Sbjct: 106 GFICPRKFERIGLIESVDAYLKKKKIAPDAL--DISVEELTYNLRKRKSFIKPVLLDQST 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
++GIGNW+ DEVL+QAKIHP + L+ E + + V E
Sbjct: 164 VAGIGNWIVDEVLFQAKIHPETLSNRLTDEEIERIFSATRYVLET 208
>gi|309792770|ref|ZP_07687214.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides
DG-6]
gi|308225180|gb|EFO78964.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6]
Length = 275
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 19/251 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ +G+KIV D ++++ DF A ++G+ IL R+ K
Sbjct: 1 MPELPEVEIVARSLAAQVVGRKIVMLEKLDWERMVETPDLPDFCALLIGRTILGVGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ + M+G + + G A + D+ ++ + LDDG +
Sbjct: 61 WLLIQLDAGWTLAVHLRMSGNLIVYGPA---------QPVDQ----HTHLVLGLDDGRRI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD R+F ++RLL DP + + + GP+ L T L++++ +K LLLDQ
Sbjct: 108 FFTDARKFGRLRLL-DPAGIAHLDAAYGPEPLDSHFTSSHLAALLAQRRTKLKPLLLDQG 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQFYKC 235
+I+G+GN A+E L+ A++HPL A + L I++V G SL+ Y+
Sbjct: 167 FIAGLGNIYANEALWIAQLHPLLPANQTPAQHVPALHAAIQQVLHTAIQNQGSSLRNYRN 226
Query: 236 YFAKPYVHKKH 246
+ + +++H
Sbjct: 227 SYGEAGHNQEH 237
>gi|296425340|ref|XP_002842200.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638460|emb|CAZ86391.1| unnamed protein product [Tuber melanosporum]
Length = 394
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL +V +++H GK + DD V +A F ++V G+ +L A G+
Sbjct: 1 MPELVQVARLAGRLKKHLAGKTLKNVTAMDDPVVFKDTTAKKFISAVEGRTVLDAKSLGR 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL-E 119
LWL +D PP P G+ G ++ K + Y + WP K F +++ E
Sbjct: 61 YLWLEMDKPPHPVMHLGIAGWVFFKSDPYSHYYAREKPEFTNWPPKGEIFHLKIHGSQDE 120
Query: 120 LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
F D RR ++RL++ D P+++LGPD L +T++ +K + LL
Sbjct: 121 AMFADPRRLGRLRLMDCSSKDIPKQAPLNDLGPDPLQTEITMEWLRQKFTKHS-PARLLL 179
Query: 176 LDQSYISGIGNWVADEVLYQAKIHP 200
DQ I+G G+W+++E+LYQA+IHP
Sbjct: 180 ADQKNIAGFGSWMSEEILYQARIHP 204
>gi|402833071|ref|ZP_10881693.1| DNA-formamidopyrimidine glycosylase / dephospho-CoA kinase
multi-domain protein [Selenomonas sp. CM52]
gi|402281438|gb|EJU30073.1| DNA-formamidopyrimidine glycosylase / dephospho-CoA kinase
multi-domain protein [Selenomonas sp. CM52]
Length = 477
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ G++I + + A + I +F + V G+ IL R+GK
Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITE-VDALLPRTIRFPQVEEFRSRVRGQRILRLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+S MTG Y +D D P K+ + +LDDG L
Sbjct: 60 YLMLLLESGETLLLHLRMTGRFY-------------RRDVDTPPGKHVRAIFQLDDGSCL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R F ++ LL + + P + +GP+ L E D++ K IK+ LLDQ
Sbjct: 107 FFEDVRTFGEIHLLQPQEWQAFPAFACMGPEPLTEEFDASYLYDAMQKSGQRIKSFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYK 234
++G+GN DE L+ A +HPL+ A +L+ + L + I +V E G + + Y
Sbjct: 167 GKVAGLGNIYVDEALFFAGVHPLRRAHTLNHDEAFRLWQAINKVIAEGIEDGGTTFRDYV 226
Query: 235 CYFAKPYVHKK-----HRENKIC 252
K H++ HRE + C
Sbjct: 227 DGEGKSGFHQQKLRVYHREGEPC 249
>gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M]
gi|238689243|sp|B2HJJ6.1|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M]
Length = 292
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 128/281 (45%), Gaps = 45/281 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
REAL V++ YF + + RE + CR
Sbjct: 225 REALAKGGTSFDSLYVNVNGQSGYFDR-SLDAYGREGEHCR 264
>gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 277
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL--- 226
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I E++ A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAIKHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|443490209|ref|YP_007368356.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium liflandii
128FXT]
gi|442582706|gb|AGC61849.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium liflandii
128FXT]
Length = 292
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 128/281 (45%), Gaps = 45/281 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
REAL V++ YF + + RE + CR
Sbjct: 225 REALAKGGTSFDSLYVNVNGQSGYFDR-SLDAYGREGEHCR 264
>gi|390630661|ref|ZP_10258639.1| Formamidopyrimidine-DNA glycosylase [Weissella confusa LBAE C39-2]
gi|390484128|emb|CCF30987.1| Formamidopyrimidine-DNA glycosylase [Weissella confusa LBAE C39-2]
Length = 277
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+K++ + + + K I G++ +F+A ++G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLTRLVVGRKVLGTEVRWE-KTISGMAPEEFDAELVGRTIEKVDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M GA Y P K+ LD+G++L
Sbjct: 60 YLLFRFSGGLTMVSHLRMEGAYYTVPAGTE-------------PGKHDLVTFHLDEGIDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D + V ++++GP+ + +++ K ++ +K LLDQ
Sbjct: 107 FYRDTRKFGRMNLVPDADALQVAGLAKIGPEPTEKDLSLAYMVSEFGKSRMHVKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFYK 234
S+I+G+GN DE L+Q++IHPL A L+++ A L + I E G ++ +
Sbjct: 167 SHIAGLGNIYVDETLWQSQIHPLTAANKLTEDELARLRENIIHEITRATEHHGTTVHSFT 226
Query: 235 CYFAK 239
F +
Sbjct: 227 TAFGE 231
>gi|381336121|ref|YP_005173896.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356644087|gb|AET29930.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 277
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMKAIFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL--- 226
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I E++ A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAIKHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|270308552|ref|YP_003330610.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS]
gi|270154444|gb|ACZ62282.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS]
Length = 270
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI + I A K + ++F V G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITR-IEALWAKTL-CPPETEFNKLVSGLQVTELSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L F S M+G + +AVK + P ++++ L++G ++
Sbjct: 59 YIIISLSGGLFISVHLKMSGGL------------TAVKAENGQPPRFTRAVFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL ++ + +LGP+ L E T + + LS++K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRINLLTSLDTI--LEKLGPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN ADE L++A ++PL+ A SLSK L I+ V
Sbjct: 165 LAGVGNMYADETLFKACLNPLRPADSLSKAEVINLHSAIRSV 206
>gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 277
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLPYMKAVFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL--- 226
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I E++ A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAIKHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|346970952|gb|EGY14404.1| formamidopyrimidine-DNA glycosylase [Verticillium dahliae VdLs.17]
Length = 371
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 106/215 (49%), Gaps = 58/215 (26%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I K +D+KV G S FE +V G+ ++
Sbjct: 1 MPEIAEVARCVHFLRHHLVGKTIAKVTALEDDKVFGKVGTSGPAFEKAVQGRKVMKP--- 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
++ D WP KY KF +E +
Sbjct: 58 ---------------------------------------EEADHWPPKYWKFRLETEGTP 78
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKIT-- 170
+E++FTD RRF +VRL++ P P+ E GPD +++ VD FT+ + K+T
Sbjct: 79 KVEVAFTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVD---VDMFTEEYMRSKMTSR 135
Query: 171 ---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQ 202
IKALLLDQ++ISGIGNWVADEVLYQAK+HP Q
Sbjct: 136 HVPIKALLLDQTHISGIGNWVADEVLYQAKVHPEQ 170
>gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99]
gi|166215639|sp|A0PQ49.1|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans
Agy99]
Length = 292
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 128/281 (45%), Gaps = 45/281 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K +K LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V
Sbjct: 165 LRGKHSEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
REAL V++ YF + + RE + CR
Sbjct: 225 REALAKGGTSFDSLYVNVNGQSGYFDR-SLDAYGREGEHCR 264
>gi|373494415|ref|ZP_09585020.1| formamidopyrimidine-DNA glycosylase [Eubacterium infirmum F0142]
gi|371968912|gb|EHO86366.1| formamidopyrimidine-DNA glycosylase [Eubacterium infirmum F0142]
Length = 283
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 114/225 (50%), Gaps = 9/225 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ R +E+ + K+I KS I D K I + F ++LGK ILS RK K
Sbjct: 1 MPELPEVESIRSMLEKRVLNKRISKSEIIDI-KAIAKPEPALFGKALLGKKILSVGRKAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + D MTG IYI G + +K + ++++ + DDG
Sbjct: 60 YLIFKFDDTSKLIIHLRMTGNLIYIDGSS-----NLIIKSDENGLPRHARVIINFDDGTR 114
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R+F ++ + + I+ LGP+ L + D L+K + +K +L+D
Sbjct: 115 LFFCDQRKFGRLWFYGNGENYTSCGINRLGPEPLSAEFSEDYLCKQLAKTQRQVKTVLID 174
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
QS ISGIGN +DE+L++A I P A +S E L I EV
Sbjct: 175 QSVISGIGNIYSDEILFKAGILPQTRACDISDERAHLLHDAINEV 219
>gi|229552557|ref|ZP_04441282.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|258539930|ref|YP_003174429.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc
705]
gi|385835579|ref|YP_005873353.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus ATCC
8530]
gi|229314109|gb|EEN80082.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|257151606|emb|CAR90578.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc
705]
gi|355395070|gb|AER64500.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus ATCC
8530]
Length = 282
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++A F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTA--FQKQVVGAAVTTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + ++F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL IKE+ +A+ G S Y
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTY 225
>gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus pentosaceus ATCC 25745]
gi|421894599|ref|ZP_16325086.1| formamidopyrimidine-DNA glycosylase [Pediococcus pentosaceus IE-3]
gi|122266079|sp|Q03GC2.1|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus
ATCC 25745]
gi|385272514|emb|CCG90458.1| formamidopyrimidine-DNA glycosylase [Pediococcus pentosaceus IE-3]
Length = 275
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK IV +++ +K++ A F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLAALVEGK-IVTNVVVRYSKMVS-PKAEIFAEELEGKKILNVRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + S + M + ++G + +V D E K+ ELDDG +L
Sbjct: 59 YLLIDF------SGDYTMVSHLRMEG-------KYSVVDRREEYGKHDHVIFELDDGKDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + V + +GP+ E +T++ T L +K +K+ LLDQ
Sbjct: 106 RYNDTRKFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
S I+G+GN ADEVL+ +KIHP Q + +L+ E A L + I E
Sbjct: 166 SMIAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFE 208
>gi|407647466|ref|YP_006811225.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nocardia brasiliensis ATCC 700358]
gi|407310350|gb|AFU04251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nocardia brasiliensis ATCC 700358]
Length = 286
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 126/273 (46%), Gaps = 36/273 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR I EH +G+ I I V ++G A+D A + G + SA R
Sbjct: 1 MPELPEVEVVRRGIAEHVVGRVIDSVAITHPRSVRRHLEG--AADLAARLAGLKVQSAER 58
Query: 58 KGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
+GK LWL D P GM+G + V+ D K++ L D
Sbjct: 59 RGKFLWLTFDEPDTSLVVHLGMSGQML-------------VQPADAPLEKHAHIRATLHD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G +L F D+R F L D T VP P++ + D L V+ ++ K+ I
Sbjct: 106 GTQLRFVDQRTFGGWALAPLVEVDGTLVPEPVAHIARDPLDPRFDVESVVRAIRAKQTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-------- 223
K +LLDQS ISGIGN ADE L++AK+H + A LS+ LL + V
Sbjct: 166 KRVLLDQSVISGIGNIYADESLWRAKLHGTRLASGLSRPVLRGLLADVGAVMGEALAAGG 225
Query: 224 ---EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + RE++ CR
Sbjct: 226 TSFDALYVNVNGQSGYFERSLA-VYGREDEPCR 257
>gi|170016692|ref|YP_001727611.1| formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20]
gi|414596599|ref|ZP_11446173.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE E16]
gi|421879706|ref|ZP_16311166.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C11]
gi|169803549|gb|ACA82167.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20]
gi|390446415|emb|CCF27286.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C11]
gi|390482620|emb|CCF28234.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE E16]
Length = 280
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 32/229 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +++ IG IV K I D N I GV + F A
Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNASFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPREATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L ++ VP +++LGP+ + +++D + +K K
Sbjct: 99 LSDNRAVFYNDTRRFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTAFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP SLS+ A L + I
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTNSLSRTVLAVLRQNI 207
>gi|421768891|ref|ZP_16205601.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP2]
gi|421770956|ref|ZP_16207617.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP3]
gi|411185740|gb|EKS52867.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP2]
gi|411186391|gb|EKS53515.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP3]
Length = 282
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++A F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLTA--FQKQVVGAAVTTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKAPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL IKE+ +A+ G S Y
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTY 225
>gi|73749072|ref|YP_308311.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1]
gi|147669837|ref|YP_001214655.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Dehalococcoides sp. BAV1]
gi|289433049|ref|YP_003462922.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT]
gi|73660788|emb|CAI83395.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1]
gi|146270785|gb|ABQ17777.1| DNA-(apurinic or apyrimidinic site) lyase [Dehalococcoides sp.
BAV1]
gi|288946769|gb|ADC74466.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT]
Length = 270
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI++ + A K + A DF A G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIR-MEALWAKTLCPPEA-DFNALASGTCVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L S F S M+G + +A++ + ++++ L++G ++
Sbjct: 59 YIIISLSSGLFISVHLKMSGGL------------TAIRAENGQAPRFTRAIFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL SV + +LGP+ L E T F LS +K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRITLLAGLDSV--LEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN ADE L++A ++PL++A SLS L I+ V
Sbjct: 165 LAGVGNMYADEALFKACLNPLRSAESLSMAEVERLHSAIQSV 206
>gi|374996093|ref|YP_004971592.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus orientis
DSM 765]
gi|357214459|gb|AET69077.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus orientis
DSM 765]
Length = 273
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H G ++ + K + G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLAGHVAGL-VINEVELIWPKAVSGWEGQPFEVLVAGRKIKTIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL+ MTG R + P K++ LD G E+
Sbjct: 60 YLLIRLEEDITLIAHMRMTG-------------RLNYYSEKKEPEKHTHVVFRLDQG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + P V + +LGP+ L + T + + LS+KK+ +KA LLDQ
Sbjct: 106 HFSDVRKFGRIQAIPTPLCVSGSALCKLGPEPLEQEFTPEVLKERLSRKKLPVKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN ADE L++A I PL+ +LS+E A L + I+EV + A G S + Y+
Sbjct: 166 HVLAGLGNIYADEALFRAGISPLRRVDTLSEEELAKLHQAIREVLQAGIDAQGTSFRDYR 225
>gi|357041236|ref|ZP_09103015.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum gibsoniae DSM
7213]
gi|355355573|gb|EHG03383.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum gibsoniae DSM
7213]
Length = 276
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +++ G I IA K+I +F A V G+ I R+GK
Sbjct: 1 MPELPEVETVKRTLDKKITGLTITGVDIAMP-KIIREPDPENFAAQVTGRKITRLGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L MTG R DE K++ +L DG EL
Sbjct: 60 YLLLYLTGENVLIIHLRMTG-------------RLVYTAPDEPLPKHTHVIFKLSDGNEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F ++ L D V + +LGP+ L + D L +K+ IK+LLLDQ
Sbjct: 107 RFNDIRQFGRLLLTPKKDLNKVKGLKDLGPEPLEREFSRDFLRRELKRKRTRIKSLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++I+G+GN DE L++A++HP++ A SL+ A L I EV
Sbjct: 167 TFIAGLGNIYVDEALHRARLHPMRIASSLTPREVANLYHSIVEV 210
>gi|452204054|ref|YP_007484187.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
DCMB5]
gi|452205553|ref|YP_007485682.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
BTF08]
gi|452111113|gb|AGG06845.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
DCMB5]
gi|452112609|gb|AGG08340.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
BTF08]
Length = 270
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI++ + A K + A DF A G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIR-MEALWAKTLCPPEA-DFNALASGTCVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L S F S M+G + +A++ + ++++ L++G ++
Sbjct: 59 YIIISLSSGLFISVHLKMSGGL------------TAIRAENGQAPRFTRAIFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL SV + +LGP+ L E T F LS +K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRITLLAGLDSV--LEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN ADE L++A ++PL++A SLS L I+ V
Sbjct: 165 LAGVGNMYADEALFKACLNPLRSAESLSMAEVERLHSAIQSV 206
>gi|339448455|ref|ZP_08652011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus fructivorans KCTC 3543]
Length = 280
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 129/252 (51%), Gaps = 21/252 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G IV S+ A K+++ + A +FE + GK IL R+GK
Sbjct: 1 MPELPEVETIRRGLTNLVQGTTIV-SVDALYPKMLN-MPAKEFENMLAGKEILQIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + + ++G K V + E K++ L+D EL
Sbjct: 59 YLLIRL------SDDYTLVSHLRMEG------KYDVVPEGTE-NQKHTYVVFHLNDEREL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F K+ L+ D + ++++GP+ E +T D L K IKA LLDQ
Sbjct: 106 RYNDTRKFGKMNLVKDSQVYDLSGLNKIGPEPTEEDLTFDYLKKQLHKSHRKIKAFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S I+GIGN ADE L+ +KIHP Q LS + TL K IKE++ A+ G ++ YK
Sbjct: 166 SNIAGIGNIYADETLWLSKIHPEQATNYLSDQEIETLRKNIIKEIQLAIKGHGTTVFTYK 225
Query: 235 CYFAKPYVHKKH 246
F + + H
Sbjct: 226 NAFGEEGSFQNH 237
>gi|433461403|ref|ZP_20419013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Halobacillus sp. BAB-2008]
gi|432190230|gb|ELK47273.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Halobacillus sp. BAB-2008]
Length = 279
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + IGK+I + N + +F+ + G+ I RKGK
Sbjct: 1 MPELPEVETVRRTLHHLAIGKEIASVSVYWGNIIKHPQDPKEFDRLLRGQTIRDIERKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G + Y+ S K K++ DG EL
Sbjct: 61 FLIFQLDDLSLVS-HLRMEGKFGV-------YESSMEK------PKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + +SV P+ +LGPD E T+D F L K +KA+LLDQ
Sbjct: 107 RYNDVRKFGTMHAFRKGEESSVKPLVQLGPDPFEEAFTLDYFYMKLMKTSRNMKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
S ++G+GN DE L++AK+HP + A +L++E A + + I E E G +++ Y
Sbjct: 167 SIVAGLGNIYVDEALFRAKVHPERIANTLTREEAAKVREASIAVILEAIEQGGTTIRSY 225
>gi|340939277|gb|EGS19899.1| DNA-(apurinic or apyrimidinic site) lyase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 373
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 80 GAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKF-FVELDDGLELSFTDKRRFAKVRLLN 135
G I+I+G A T Y KR + +D WP KY KF + D +E++FTD RRF +VRL++
Sbjct: 20 GWIHIRGEQTAYTNYYKRMSDEDKAAWPPKYWKFHLITEDPAVEVAFTDPRRFGRVRLVD 79
Query: 136 DPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVA 189
P P+ E GPD +++P T + D + + + IKALLLDQ+ ISGIGNWVA
Sbjct: 80 CPGDSIRKFSPLVENGPDPVVDPEVFTEEYLRDKMRSRHVPIKALLLDQTVISGIGNWVA 139
Query: 190 DEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQF 232
DE LY A++HP Q + E L + I+ V + LG S QF
Sbjct: 140 DETLYHARLHPEQYCDDFNDEQIKQLYESIRYVCQFAVDKLGDSDQF 186
>gi|379748344|ref|YP_005339165.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
gi|378800708|gb|AFC44844.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
Length = 282
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LDS GM+G + + V + R SA+ LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL----------------LDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 VLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 224
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 FDSLYVNVNGESGYFDRS-LDAYGREGQGCR 254
>gi|116490733|ref|YP_810277.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni PSU-1]
gi|290890153|ref|ZP_06553235.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429]
gi|419757722|ref|ZP_14284050.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB304]
gi|419857368|ref|ZP_14380077.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB202]
gi|419859113|ref|ZP_14381769.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421184125|ref|ZP_15641551.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB318]
gi|421187666|ref|ZP_15645014.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB419]
gi|421189899|ref|ZP_15647207.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB422]
gi|421191085|ref|ZP_15648368.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB548]
gi|421193897|ref|ZP_15651138.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB553]
gi|421194629|ref|ZP_15651847.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB568]
gi|421196574|ref|ZP_15653757.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB576]
gi|116091458|gb|ABJ56612.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni PSU-1]
gi|290480197|gb|EFD88839.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429]
gi|399905539|gb|EJN92979.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB304]
gi|399967503|gb|EJO01983.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB419]
gi|399967921|gb|EJO02379.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB318]
gi|399971110|gb|EJO05399.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB553]
gi|399971555|gb|EJO05796.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB422]
gi|399973272|gb|EJO07448.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB548]
gi|399976557|gb|EJO10571.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB576]
gi|399977334|gb|EJO11315.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB568]
gi|410497133|gb|EKP88609.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410498111|gb|EKP89572.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB202]
Length = 274
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++++ +KI K + K++D ++F V+G + R+GK
Sbjct: 1 MPELPEVETVRRGLKKYFENEKI-KDLKIIYPKLLDS-DRTEFIEKVVGSTVSRIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RLD+ M G R +V+ E P K+++ EL++G ++
Sbjct: 59 FLLFRLDNNLTIVSHLRMEG-------------RYSVEAAQEAPHKHTEMIFELENGKQV 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ N+ V I +GP+ + +T D F + L K K +KALLLD
Sbjct: 106 FYDDTRKFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKALLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
Q+ ++GIGN ADEVL+ ++I PL+ +S+E L + I +RE
Sbjct: 166 QNNVAGIGNIYADEVLWLSEISPLRPTNEISEEEADNLRENI--IRE 210
>gi|152964122|ref|YP_001359906.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus
radiotolerans SRS30216]
gi|151358639|gb|ABS01642.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus
radiotolerans SRS30216]
Length = 273
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 30/258 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV++AR+ +E + + I + D + D +++G+ + +AHR+GK
Sbjct: 1 MPELPEVQSARQVVERGGLFRTIA-DVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGK 59
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIK---------GVAVTQYKRSAVKDTDEWPSK 106
++W D P GM+G I++ G + S +EW
Sbjct: 60 SMWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRESPNPVKEEW--- 116
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
+F ++ +DG +L DKRR +VRL P + LGPDA L + +EF + + +
Sbjct: 117 -YRFTLDFEDGGQLRLFDKRRLGRVRL------DPDVDALGPDAEL--VGREEFRERIGR 167
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
+KA LLDQS ++GIGN +ADEVL++A+ PL+ A L E L +E+R A+
Sbjct: 168 GSAPLKARLLDQSVVAGIGNLLADEVLWRARASPLKPAGELRAEELDELR---RELRAAI 224
Query: 227 GVSLQFYKCYFAKPYVHK 244
+++ + + H+
Sbjct: 225 RHAVRHGGVHTGEVVPHR 242
>gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
gi|379755633|ref|YP_005344305.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-02]
gi|379763177|ref|YP_005349574.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-64]
gi|387877002|ref|YP_006307306.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. MOTT36Y]
gi|378805849|gb|AFC49984.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-02]
gi|378811119|gb|AFC55253.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-64]
gi|386790460|gb|AFJ36579.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. MOTT36Y]
Length = 282
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LDS GM+G + + V + R SA+ LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL----------------LDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 VLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 224
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 FDSLYVNVNGESGYFDRS-LDAYGREGQGCR 254
>gi|435853198|ref|YP_007314517.1| formamidopyrimidine-DNA glycosylase Fpg [Halobacteroides halobius
DSM 5150]
gi|433669609|gb|AGB40424.1| formamidopyrimidine-DNA glycosylase Fpg [Halobacteroides halobius
DSM 5150]
Length = 274
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 17/228 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ + K+I I + ++I DF+ ++G I R+GK
Sbjct: 1 MPELPEVQTVVDTLQGFILNKEITDVKIKQE-RLIAQSKPEDFKEILIGSKIEEVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
+ + LD+ + MTG +Y K DE KY F + E
Sbjct: 60 YIIIELDNRYYLVTHLRMTGRFVYTK--------------QDEEHDKYDYIFFKFRGADE 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L KR+F +V L+ D +++LGP+ L + T++ F + LS ++ IK LLL+Q
Sbjct: 106 LRLGSKRQFTRVYLVKDLEDAGSLTKLGPEPLSDEFTLELFKEMLSTRRGRIKPLLLNQK 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+++G+GN DE +Y ++IHPL+TA +LS E L K IK+V RE +
Sbjct: 166 FLAGLGNIYVDEAIYISQIHPLRTADTLSLEEIERLYKAIKQVLREGI 213
>gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc argentinum KCTC 3773]
Length = 280
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG +I K I D I GV + F A
Sbjct: 1 MPELPEVETVRRGLEKLIIGSQITQVKLPYPKVITGDSQAFITGVRNAYFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ D P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPIDATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRL--LNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L N T +VP + +LGP+ + +T+ + ++ K
Sbjct: 99 LADDRVLFYNDTRRFGRMVLATTNQETLAVPALGKLGPEPTAQDLTLADMVAKFARSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL--- 226
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP A LS+ ATL + I E+ A+
Sbjct: 159 VKSFLLDQTQIAGIGNIYADEVLWQSKIHPETPANLLSEMQLATLRQNIISEMARAIEHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|323339591|ref|ZP_08079865.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC
25644]
gi|417973868|ref|ZP_12614702.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
25644]
gi|323092986|gb|EFZ35584.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC
25644]
gi|346329739|gb|EGX98024.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
25644]
Length = 276
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S ++F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKAEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRQKGEPVEKHTHVIFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFYK 234
+ ++G+GN ADEVLY AKIHPL LS++ L I ++ E G +++ Y
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQSDCLRNSIIDELEKASEKGGTTIRSYA 225
Query: 235 CYF 237
F
Sbjct: 226 NAF 228
>gi|333923228|ref|YP_004496808.1| fomramidopyrimidine-DNA glycosylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748789|gb|AEF93896.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 277
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 21/227 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R++E+H G I ++ KVI F ++GK + R+G
Sbjct: 1 MPELPEVETVVRSLEKHLAGLTIT-AVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L G+T ++++ R D + K++ LD+G +
Sbjct: 60 KYLLLHLSD--------GLTLVVHLRMTG-----RLVYCDAEAPVEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L FTD+R+F +++L+ PTS + I +LGP+ L E T D + +++ IK LL
Sbjct: 107 LRFTDQRQFGRMQLV--PTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLL 164
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LDQ +I+G+GN ADE L++A++HP + A LS A L K I EV
Sbjct: 165 LDQCFIAGLGNIYADEALFRARVHPERIASDLSPREIARLHKAIVEV 211
>gi|323703152|ref|ZP_08114806.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans
DSM 574]
gi|323531929|gb|EGB21814.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans
DSM 574]
Length = 277
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 21/227 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R++E+H G I ++ KVI F ++GK + R+G
Sbjct: 1 MPELPEVETVVRSLEKHLAGLTIT-AVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L G+T ++++ R D + K++ LD+G +
Sbjct: 60 KYLLLHLSD--------GLTLVVHLRMTG-----RLVYCDAETPVEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L FTD+R+F +++L+ PTS + I +LGP+ L E T D + +++ IK LL
Sbjct: 107 LRFTDQRQFGRMQLV--PTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLL 164
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LDQ +I+G+GN ADE L++A++HP + A LS A L K I EV
Sbjct: 165 LDQCFIAGLGNIYADEALFRARVHPERIASDLSPREIARLHKAIVEV 211
>gi|443306800|ref|ZP_21036587.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. H4Y]
gi|442764168|gb|ELR82166.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. H4Y]
Length = 282
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLTDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LDS GM+G + + V + R SA+ LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL----------------LDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 VLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 224
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 FDSLYVNVNGESGYFDRS-LDAYGREGQGCR 254
>gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 273
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 117/240 (48%), Gaps = 23/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + G+ I + I +V+ G +F+ +LG+ +L R+ K
Sbjct: 1 MPELPEVETIAAGLAPLVSGRSI-RDIFLMQARVVRG-DELEFQRRLLGRKVLDVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD P F MTG ++ V D P K++ ++L D + +
Sbjct: 59 LLILDLDGPLHLVFHLKMTGKVW-------------VPDKGVQPGKHTHLILDLGDEVYV 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D+RRF V L P S LGP+ L ++ +FTD +K IK+LLLDQ
Sbjct: 106 FFDDQRRFGYVTALTPPELESWDFYRGLGPEPL--HLSSQDFTDIFQGRKARIKSLLLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSLQFYK 234
I+GIGN ADE LY A IHP AV LS + +L + ++E +A G S + Y+
Sbjct: 164 QVIAGIGNIYADEALYMAGIHPCTRAVDLSGDQLEALHCSLQQVLQEAIQAGGSSFRDYR 223
>gi|406031886|ref|YP_006730778.1| Formamido pyrimidine-DNA glycosylase [Mycobacterium indicus pranii
MTCC 9506]
gi|405130433|gb|AFS15688.1| Formamido pyrimidine-DNA glycosylase [Mycobacterium indicus pranii
MTCC 9506]
Length = 282
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLTDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LDS GM+G + + V + R SA+ LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL----------------LDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 VLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 224
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 FDSLYVNVNGESGYFDRS-LDAYGREGQGCR 254
>gi|425735353|ref|ZP_18853667.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Brevibacterium casei S18]
gi|425479759|gb|EKU46931.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Brevibacterium casei S18]
Length = 315
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 31/258 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-------DNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE+ RR ++E G ++ + + D + ID +A+ F V G +I
Sbjct: 1 MPELPEVESVRRGVDEWTAGARVTAAEVVDPRILGTTSARRIDEATAAAFAERVTGASIT 60
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
A R+GK +WL LD GM+G + + A DE ++++ +
Sbjct: 61 GAERRGKFMWLTLDVDAGLLIHLGMSGQLRVHLAA------------DE-THRHTRAVLR 107
Query: 114 LDDG---LELSFTDKRRFAKVR---LLNDPTSVPPIS--ELGPDALLEPMTVDEFTDSLS 165
L+ G +L F D+R F + L+ + P S + PD L + V+ D+L+
Sbjct: 108 LERGEQRYDLRFVDQRIFGHLSVQGLVASHGRLVPASAIHIAPDPLEDAFDVEATVDALA 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+K+ IKA LLDQ+ +SGIGN ADE L++A +HPL + A +L+ V
Sbjct: 168 RKRTPIKAALLDQTLVSGIGNIYADEALFRAGVHPLALPARTRRSRLAAVLESATTV--- 224
Query: 226 LGVSLQFYKCYFAKPYVH 243
+G +L F YV+
Sbjct: 225 MGDALAVGGTSFDSLYVN 242
>gi|335996439|ref|ZP_08562356.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis SPM0211]
gi|335351509|gb|EGM53000.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis SPM0211]
Length = 276
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S ++F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKAEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRRKGEPVEKHTHVVFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFYK 234
+ ++G+GN ADEVLY AKIHPL LS++ L I ++ E G +++ Y
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQADCLRNSIIDELEKASEKGGTTIRSYA 225
Query: 235 CYF 237
F
Sbjct: 226 NAF 228
>gi|379710092|ref|YP_005265297.1| formamidopyrimidine-DNA glycosylase [Nocardia cyriacigeorgica
GUH-2]
gi|374847591|emb|CCF64661.1| formamidopyrimidine-DNA glycosylase [Nocardia cyriacigeorgica
GUH-2]
Length = 288
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 25/247 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR + +H +G I +A V ++G A+D A + G + +A R
Sbjct: 1 MPELPEVEVVRRGLADHVVGHVIESVAVAHPRSVRRHLEG--AADLAARLSGLRVTAAER 58
Query: 58 KGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
+GK LWL D P GM+G + I+ K + ++ T LD+
Sbjct: 59 RGKYLWLTFDDPDLALVVHLGMSGQMLIRPAEAPVEKHAHIRAT-------------LDN 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G EL F D+R F L D T VP P++ + D L + ++ K I
Sbjct: 106 GAELRFVDQRTFGGWALAELVEVDGTRVPEPVAHIARDPLDPRFDPEAVVAAIRAKNTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSL 230
K +LLDQ+ ISG+GN ADE L++AK+H + A LS+ TLL V R+AL
Sbjct: 166 KRVLLDQTVISGVGNIYADEALWRAKLHGCRIASGLSRPVLHTLLADAAAVMRDALAAGG 225
Query: 231 QFYKCYF 237
+ +
Sbjct: 226 TSFDALY 232
>gi|421876480|ref|ZP_16308037.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C10]
gi|372557773|emb|CCF24157.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C10]
Length = 280
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 114/229 (49%), Gaps = 32/229 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +++ IG IV K I D N I GV + F A
Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNAYFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPREATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L ++ VP +++LGP+ + +++D +K K
Sbjct: 99 LSDNRAVFYNDTRRFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTVFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP SLS+ A L + I
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTNSLSRTVLAVLRQNI 207
>gi|158312992|ref|YP_001505500.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec]
gi|229541073|sp|A8L594.1|FPG_FRASN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|158108397|gb|ABW10594.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec]
Length = 291
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 125/246 (50%), Gaps = 13/246 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E +G+ + + + V ++ +D F AS++G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60
Query: 60 KNLWLRL--DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL L P P+ + G + + G Q D+ + F D+G
Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSG----QLLVVPADSPDQVHLRVRFRFT--DEG 114
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL F D+R F + +++ +P PI+ + PD L + F D+L +++ +K LL
Sbjct: 115 RELRFVDQRTFGGLAVVSGGAELPAPIAHIAPDPLSVDFDPERFADALRRRRTGLKRALL 174
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCY 236
DQ+ ISG+GN ADE L+ A++H + ++++ A L+ + VR + +L
Sbjct: 175 DQTLISGVGNIYADEGLWAARLHYARPTETVTR---AEALRLLDAVRTVMTAALAAGGTS 231
Query: 237 FAKPYV 242
F + YV
Sbjct: 232 FDRLYV 237
>gi|418070924|ref|ZP_12708199.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus rhamnosus R0011]
gi|423078735|ref|ZP_17067412.1| DNA-formamidopyrimidine glycosylase [Lactobacillus rhamnosus ATCC
21052]
gi|357540344|gb|EHJ24361.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus rhamnosus R0011]
gi|357549023|gb|EHJ30871.1| DNA-formamidopyrimidine glycosylase [Lactobacillus rhamnosus ATCC
21052]
Length = 282
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFRDGSQL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + ++F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL IKE+ +A+ G S Y
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTY 225
>gi|410720764|ref|ZP_11360117.1| formamidopyrimidine-DNA glycosylase [Methanobacterium sp.
Maddingley MBC34]
gi|410600475|gb|EKQ55003.1| formamidopyrimidine-DNA glycosylase [Methanobacterium sp.
Maddingley MBC34]
Length = 261
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP VE ++ + + + I + +++ S + + S+ G + R GK
Sbjct: 1 MPELPSVEIFKQYFDRTSLHQPITNVNVVSPEILVE-TSTTQMKESLEGHEFTDSIRYGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+ +LD+ F FGMTG ++ DT E S+Y + ++ DG L
Sbjct: 60 YLFGKLDNDLFLIMHFGMTGYLHY--------------DT-ENSSRYPRLLLKFSDGNFL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F D R+F K+ L +DP LGPDAL + ++F + +K +K LLL+Q+
Sbjct: 105 AFDDARKFGKLGLTHDPDEFIATRRLGPDAL--EVNFEDFQEIFRTRKGMMKPLLLNQNI 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGN ADE+LYQ+++HP+ A L + L K +K+V
Sbjct: 163 LAGIGNLYADEILYQSRVHPMTHANLLDDQEWEQLFKNMKKV 204
>gi|347525545|ref|YP_004832293.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
27782]
gi|345284504|gb|AEN78357.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
27782]
Length = 276
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 17/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S +F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKDEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRRKGEPVEKHTHVIFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ ++G+GN ADEVLY AKIHPL LS++ L I
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQADCLRNSI 206
>gi|199599522|ref|ZP_03212911.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001]
gi|199589591|gb|EDY97708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001]
Length = 282
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL IKE+ +A+ G S Y
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTY 225
>gi|397654322|ref|YP_006495005.1| formamidopyrimidine DNA glycosylase [Corynebacterium ulcerans 0102]
gi|393403278|dbj|BAM27770.1| formamidopyrimidine DNA glycosylase [Corynebacterium ulcerans 0102]
Length = 285
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLHGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK LW LD GM+G + IK D P + F+ ++
Sbjct: 60 GKFLWFVLDDSCALMVHLGMSGQMLIKHA-----------DAHSHPHTRIRCFLSDEEAR 108
Query: 119 -ELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F RL + VP P++ + D LLEP+ T L K K + I
Sbjct: 109 GELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPVQDLMATARLIKSKHVEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+
Sbjct: 168 KKLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLR 213
>gi|431793586|ref|YP_007220491.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783812|gb|AGA69095.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 273
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ H + + + I ++ F +V G I S R+GK
Sbjct: 1 MPELPEVETIRRSLSLH-VFNQCINEIEVRWPGAVEDYEGRTFAETVKGLRIQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD MTG + V TQ + P K++ ++LD G E+
Sbjct: 60 YLLFTLDEGWSFIAHMRMTGRL----VYHTQ---------NHEPEKHTHVVLKLDQG-EI 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + + ++ LGP+ L E T DE ++ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLNQSSLARLGPEPLEEDFTPDELGKRIAARKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
S ++GIGN ADE L++A I P + A +L+ E +L + I+EV + A G S + Y+
Sbjct: 166 SLVAGIGNIYADESLFRAGIAPERCANTLTNEEVESLYRAIREVLQEGIDAKGTSFRDYQ 225
>gi|403379790|ref|ZP_10921847.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus sp. JC66]
Length = 285
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + GK+I K + + F + G++I S R+GK
Sbjct: 1 MPELPEVETVVRTLNQLVSGKRIEKVSVHLPRIIQRPSEPEQFSQVLAGRSIASIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ M + ++G R + DE K++ DDG EL
Sbjct: 61 FIRFILND-------LVMVSHLRMEG-------RYGLYSRDEPVEKHTHVIFHFDDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L N + +PP+ +LG + L T+D F L + IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHLFNPGEEWQLPPLHKLGLEPLDPAFTLDAFRAQLRGRSTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
I+GIGN ADE L++A IHP +TA SL+++ A+L I +E A G S++ Y
Sbjct: 167 QRIAGIGNIYADEALFRAGIHPERTAGSLTRQEAASLHTAIVGTLQEAVHAGGSSIKSY 225
>gi|320160672|ref|YP_004173896.1| formamidopyrimidine-DNA glycosylase [Anaerolinea thermophila UNI-1]
gi|319994525|dbj|BAJ63296.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1]
Length = 271
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 33/235 (14%)
Query: 1 MPELPEVEAARRAIEE------HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEV+ + + +GK+I + +A K + F+ ++ G+ I
Sbjct: 1 MPELPEVQTIVSVLRDGGRGAPSILGKQITAANVAW-QKTLAMPDLFTFQQNITGEEIRD 59
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-----YSK 109
R+GK +W+ L S M+G + ++ PS + +
Sbjct: 60 IRRRGKFIWIILQSAHL-FIHLRMSGDVRVE------------------PSTSPLQLHDR 100
Query: 110 FFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
++E DGL L F D R+F +V L +P V I +LGP+ L E ++ +F L+K +
Sbjct: 101 LWLEFSDGLRLVFNDPRKFGRVWLAENPQDV--IGDLGPEPLDESLSPTQFHQRLTKNRR 158
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+KALLLDQ++++G+GN +DE L+ AK+HP +++ SLS E A LL+ I++V E
Sbjct: 159 QLKALLLDQNFLAGVGNIYSDEALFLAKLHPKRSSDSLSPEESARLLQAIRQVLE 213
>gi|379705759|ref|YP_005204218.1| formamido pyrimidine-DNA glycosylase [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682458|gb|AEZ62747.1| formamido pyrimidine-DNA glycosylase [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 273
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G+KIV + V +SA FE+ +LG+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLERLIVGRKIVSVDVRVPKMVKTDLSA--FESDLLGQTIQSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + ++ +D K+ F +LDDG L
Sbjct: 59 YLLLNLDEQVIIS-HLRMEGKYLL-------FEHQVPED------KHFHIFFDLDDGSTL 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L+ N + +LGP+ E V EFT LS K IK LLDQ
Sbjct: 105 VYKDVRKFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
+ ++G+GN DEVL+ AKIHP + A SL K
Sbjct: 165 TLVAGLGNIYVDEVLWAAKIHPERQANSLQK 195
>gi|258508755|ref|YP_003171506.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|385828416|ref|YP_005866188.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|257148682|emb|CAR87655.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|259650061|dbj|BAI42223.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
Length = 282
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL IKE+ +A+ G S Y
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTY 225
>gi|258515628|ref|YP_003191850.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans
DSM 771]
gi|257779333|gb|ACV63227.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans
DSM 771]
Length = 275
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE +R +E G+ +++I + I G+ +F+ ++G+ I S R+G
Sbjct: 1 MPELPEVETIKRTLEPKLTGQSFTEALIYLPTIIRIPGIE--EFKKEIVGQKIKSISRRG 58
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + L + F MTG R DE K++ ++LD G E
Sbjct: 59 KYLTINLSNNLALIFHLRMTG-------------RLIYCHADEPIVKHTHLILKLDSGNE 105
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D R+F ++ L++ +V + +LGP+ + T + L +++ IK LLLD
Sbjct: 106 LRFIDVRQFGRIWLVSVQKLNTVSGLKDLGPEPFDKKFTREFLKKELRRRRTRIKPLLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
Q++I+G+GN ADE L++A+IHP + A +L+ + L I+EV E
Sbjct: 166 QTFIAGLGNIYADEALHRARIHPEKLACNLTARETSKLFITIREVLE 212
>gi|375142898|ref|YP_005003547.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium rhodesiae
NBB3]
gi|359823519|gb|AEV76332.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium rhodesiae
NBB3]
Length = 296
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H + K I + V + +D A +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVVDKTISAVRVHHPRAVRRHEAGPADLTARLLNSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + I G + R ++ E + + LDDG
Sbjct: 61 KYLWLTLDDGCALVVHLGMSGQMLI-GAPTSARARRGQREPRE---DHLRIAALLDDGTA 116
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D T VP P++ + D L D L +K IK
Sbjct: 117 LSFVDQRTFGGWMLADVVTVDGTEVPMPVAHIARDPLDPDFNRDGVVTVLRRKHSEIKRQ 176
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SG+GN ADE L++AKI+ + A SL++ +L +V EALG
Sbjct: 177 LLDQTVVSGVGNIYADEALWRAKINGARLASSLTRAKLGEVLDAATDVMTEALGQGGTSF 236
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 237 DSLYVNVNGESGYFER-SLDAYGREGEPCR 265
>gi|443242062|ref|YP_007375287.1| DNA glycosylase [Nonlabens dokdonensis DSW-6]
gi|442799461|gb|AGC75266.1| DNA glycosylase [Nonlabens dokdonensis DSW-6]
Length = 260
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 18/252 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV + I+ C+ KKI SI D ++ A+DFE ++G+ +++ R GK
Sbjct: 1 MPELPEVHGYKVYIDSTCLHKKIT-SIDCRDKRLFKK-PAADFETFLVGEQLVNTVRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L++ FGMTG R + E K+ + D+
Sbjct: 59 YLFIETSGEKVLVMHFGMTG-------------RPKYYKSKEDRPKFGHIVLTFDNDFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F L++D L DA +++D+F +SL +K IK +LLDQS
Sbjct: 106 AFENKRKFGWWDLIDDIQEYKEEHGLSDDA--RELSLDDFKNSLKTRKTHIKKVLLDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
+G+GNW+ADE+LYQAK HP ++ ++ + +K+V E + + + F +
Sbjct: 164 CAGVGNWMADEILYQAKTHPKIKVENMMEKGIEDVFNAMKKVIE-VAIEKDAHYSDFPQD 222
Query: 241 YVHKKHRENKIC 252
++ E IC
Sbjct: 223 FLMHFREEGGIC 234
>gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
11154]
gi|339491521|ref|YP_004706026.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc sp. C2]
gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
11154]
gi|338853193|gb|AEJ31403.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc sp. C2]
Length = 287
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG +I K + KVI G S + F VL + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGSQI-KQVKLPYPKVITGDSQA-FVTGVLNATFHAIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + M G QY +V+ P K+++ ELDD +
Sbjct: 59 YLLLRLSNGHTIVSHLRMEG----------QY---SVEPLGAQPYKHTEIIFELDDQRAI 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ V + +LGP+ +T+ D S+ K +K+ LLD
Sbjct: 106 FYNDTRRFGRMVLTTTDHETDEVQSLGKLGPEPTDVSLTLPYMIDIFSRSKKPVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFY 233
Q+ I+GIGN ADEVL+Q+KIHP A LS+ ATL + I E++ A+ G ++ +
Sbjct: 166 QNKIAGIGNIYADEVLWQSKIHPETPANELSEIELATLRQNIISEMKMAIKNHGTTVHSF 225
Query: 234 KCYFAK 239
F +
Sbjct: 226 SNVFGE 231
>gi|300087227|ref|YP_003757749.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526960|gb|ADJ25428.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 271
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE I + + +++ ++ + G S + F A + G+ + R+GK
Sbjct: 1 MPELPEVETVTNEIRPY-VQDRVITGVVVHWPGTVRGHSPAQFSADLEGRRVTGVFRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LD MTG++ G D D+ P Y + + LDDG +
Sbjct: 60 YIVWELDDGNRLLTHLKMTGSLIALG-----------PDDDDPP--YVRVEIRLDDGRRV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F ++ L+ + + V ++ LGP+ L + T + F L K+K +K LLDQ+
Sbjct: 107 IFRDPRKFGRMALVGEASGV--LAGLGPEPLADEFTAEVFESLLRKRKSPVKTALLDQTL 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY--- 233
++GIGN ADE L+ A IHPL+ A SL + L I+ + +A G S+ Y
Sbjct: 165 MAGIGNMYADEALHSAGIHPLRPADSLDTDEYRRLYLAIRRILRSAIDARGASISNYIRP 224
Query: 234 -----KCYFAKPYVHKKHRENKIC 252
+FA HK+ + C
Sbjct: 225 GGDLGHAHFAFKVAHKRGENCRGC 248
>gi|156743763|ref|YP_001433892.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM
13941]
gi|189044671|sp|A7NQM8.1|FPG_ROSCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|156235091|gb|ABU59874.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM
13941]
Length = 283
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ G +I + D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V + P K++ + L+DG ++
Sbjct: 61 WILLFLDDGWTLALHLRMSGSL-------------TVHPAEAQPDKHTHLALRLEDGRQI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L + TV+ L +K IK LLLDQS
Sbjct: 108 FFLDPRKFGRARLLDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK-EVREAL---GVSLQFYKCY 236
I+GIGN ADE L++A+IHPL+ A LS A L I+ +R+AL G +L+ Y+
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGSTLRDYRNS 227
Query: 237 FAKPYVHKKH-----RENKIC 252
+ +++H RE + C
Sbjct: 228 YGAGGTNQEHFNAYDREGRPC 248
>gi|354543096|emb|CCE39814.1| hypothetical protein CPAR2_602320 [Candida parapsilosis]
Length = 391
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 67/293 (22%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS--------DFEASVLGKAI 52
MPE+ EV ++ + +G +I ++ D + + S D ++ +LG I
Sbjct: 1 MPEVAEVAHVCALLKRNVLGFRIKNVNLSLDTLLFPILKESKHPDAELEDIKSKLLGSRI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS-----FQFGMTGAIYIKGV-----------------AVT 90
S R GK WLRL P FGMTG I I+ V +
Sbjct: 61 DSVGRHGKYFWLRLTKEEVPKSRVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKILKELN 120
Query: 91 QYKRSA---VKDTDEWPSKYSKFFVEL---DDGLELSFTDKRRFAKVRLLNDPTS----- 139
+ K+ V+ EWP ++SKF ++L D LE+SF D RR +VRL++D +
Sbjct: 121 EPKKEGDVKVEIDHEWPPRFSKFEMDLAKDDFKLEISFADPRRLGRVRLISDELASTDEG 180
Query: 140 ---VPPISELGPD--------------ALLEP---------MTVDEFTDSLSKKKITIKA 173
+PP+ LGPD +P +++ +F + + KK IK+
Sbjct: 181 LLQLPPLDALGPDYSKSKVVKKDSDDFVFGDPDPCNHGRPRLSLLDFNELILSKKKPIKS 240
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
LLLDQ+Y +G+GNWVADEVL+ AK+HP + S + + T+ ++ + E+L
Sbjct: 241 LLLDQAYFAGVGNWVADEVLFHAKLHPNEIISSKIENNHGTVHPVVQGLYESL 293
>gi|89894087|ref|YP_517574.1| hypothetical protein DSY1341 [Desulfitobacterium hafniense Y51]
gi|219668498|ref|YP_002458933.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
DCB-2]
gi|423076844|ref|ZP_17065552.1| DNA-formamidopyrimidine glycosylase [Desulfitobacterium hafniense
DP7]
gi|122483280|sp|Q24XW2.1|FPG_DESHY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789434|sp|B8FU83.1|FPG_DESHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|89333535|dbj|BAE83130.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538758|gb|ACL20497.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
DCB-2]
gi|361852021|gb|EHL04306.1| DNA-formamidopyrimidine glycosylase [Desulfitobacterium hafniense
DP7]
Length = 273
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
+ ++GIGN ADE L++A I P + A SL+KE L I +V E A G S + Y+
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
>gi|117928780|ref|YP_873331.1| formamidopyrimidine-DNA glycosylase [Acidothermus cellulolyticus
11B]
gi|166215603|sp|A0LV85.1|FPG_ACIC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|117649243|gb|ABK53345.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus
cellulolyticus 11B]
Length = 284
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G++I + + V A+DF ++G+ I + R+G
Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LDS GM+G + A P F D E
Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASPS------------PKHLRARFAFTDGDPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + L VP IS + PD L EF ++++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLTLAPLIADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+ ISG+GN ADE L++A++H V +S +C LL ++ V R AL
Sbjct: 169 TLISGVGNIYADEALWRARLHYATPTVDISAATCRRLLAALRAVFRAAL 217
>gi|300173771|ref|YP_003772937.1| formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG
18811]
gi|333446006|ref|ZP_08480948.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc inhae KCTC 3774]
gi|299888150|emb|CBL92118.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG
18811]
Length = 287
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ +G +I K I D I GV+ + F A
Sbjct: 1 MPELPEVETVRRGLEKLIVGGQITQVHLLYPKLINGDSQAFITGVTNASFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVESIETRPYKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L N + VP +++LGP+ + + +D D S+ K
Sbjct: 99 LLDQRRVFYNDTRRFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVDIFSRSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL--- 226
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP +L+ + L + I E++ A+
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTKTLTVRELSLLRENIIAEMKRAIAHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|383821033|ref|ZP_09976284.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium phlei RIVM601174]
gi|383334064|gb|EID12507.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium phlei RIVM601174]
Length = 284
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H + K I + V +D A +LG I+ R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVVDKTITAVRVHHPRAVRRHEAGPADLTARLLGSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + I V + R A LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLIGEVPNANHLRIATL---------------LDDGTR 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L+F D+R F L + D + VP P++ L D L D L K IK
Sbjct: 106 LNFVDQRTFGGWMLTDMVSVDGSEVPLPVAHLARDPLDPRFDRDAVVKVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++AKI+ + A SLS+ A LL +V R+AL
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAKINGARVASSLSRPKLAALLDHAADVMRDALAQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>gi|365175262|ref|ZP_09362692.1| formamidopyrimidine-DNA glycosylase [Synergistes sp. 3_1_syn1]
gi|363612826|gb|EHL64352.1| formamidopyrimidine-DNA glycosylase [Synergistes sp. 3_1_syn1]
Length = 273
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ + +G +I I +D KV+ SA +F + G+ I+ R+GK
Sbjct: 1 MPELPEVETVKQVLAPQIMGLRIA-DITVNDPKVVARPSAEEFVRELKGERIMELERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ MTG++ + ++P K++ L++G
Sbjct: 60 FLSLCLEGGGRIVLHLRMTGSLLLT--------------PPDFPLEKHTHLIFHLENGRA 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L FTD RRF + L+ + +S LGP+ E + + +L+K+K +K+ LLD
Sbjct: 106 LRFTDMRRFGRFWLIRGGEEDLFSGVSRLGPEPFDEDFSAAYLSSALAKRKSAVKSCLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +I+GIGN ADE L+ A I P + A LS + C L I+E
Sbjct: 166 QEFIAGIGNIYADESLFAANIRPERPACGLSGDECERLAAAIREA 210
>gi|341820027|emb|CCC56252.1| formamidopyrimidine-DNA glycosylase [Weissella thailandensis
fsh4-2]
Length = 278
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + + V+S K++ G++A +F+ ++ + IL R+GK
Sbjct: 1 MPELPEVETVRRGLT-NLVAGRTVESTEVRWEKIVGGLTAEEFDQALRNQTILKIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M G+ Y P K+ LD G++L
Sbjct: 60 YLLFRFTGDITMVSHLRMEGSYYTVPAGTE-------------PGKHDLVTFHLDHGVDL 106
Query: 121 SFTDKRRFAKVRLL-NDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ ND +V ++ +GP+ +T+D K K+ +K LL+Q
Sbjct: 107 FYRDTRKFGRMNIVPNDQVMTVAGLATIGPEPTESDLTIDYMISEFGKSKMHVKPFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
++I+G+GN DE L+Q+KIHPL +A L+ E L K I
Sbjct: 167 NHIAGLGNIYVDETLWQSKIHPLTSANQLTVEELTILRKNI 207
>gi|421186694|ref|ZP_15644076.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB418]
gi|399965498|gb|EJO00070.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB418]
Length = 274
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 20/227 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++++ +KI K + K++D ++F V+G + R+GK
Sbjct: 1 MPELPEVETVRRGLKKYFENEKI-KDLKIIYPKLLDS-DRTEFIEKVVGSTVSRIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RLD+ M G R +V+ E P K+++ EL++G ++
Sbjct: 59 FLLFRLDNNLTIVSHLRMEG-------------RYSVEAAQEAPHKHTEMIFELENGKQV 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ N+ V I +GP+ + +T D F + L K K +KA LLD
Sbjct: 106 FYDDTRKFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKAWLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
Q+ ++GIGN ADEVL+ ++I PL+ +S+E L + I +RE
Sbjct: 166 QNNVAGIGNIYADEVLWLSEISPLRPTNEISEEEADNLRENI--IRE 210
>gi|304407961|ref|ZP_07389611.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus
YK9]
gi|304342980|gb|EFM08824.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus
YK9]
Length = 299
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK IV+ ++ + F A++ G I S R+GK
Sbjct: 1 MPELPEVETVRRTLNELVAGKTIVRVTVSLPRIIRRPAEPEQFAAALAGHTITSVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + + ++G R V DE ++ DG EL
Sbjct: 61 FLRLVLDG-------LVLVSHLRMEG-------RYGVYRQDELVETHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + +PP+++LG + L + T + LS + IK LLLDQ
Sbjct: 107 RYKDVRQFGTMDLFAPEEDLLLPPLNKLGMEPLDDDFTEKALRERLSSRTTKIKPLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+Y+ G+GN DE L+QA IHP +TA +L + L + I++
Sbjct: 167 AYVVGLGNIYVDEALFQAGIHPERTADTLKRAEWTRLYEAIRDT 210
>gi|441206732|ref|ZP_20973265.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis MKD8]
gi|440628430|gb|ELQ90229.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis MKD8]
Length = 285
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V + +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV +ALG
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDALGQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDR-SLDAYGREGEPCR 254
>gi|284040426|ref|YP_003390356.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74]
gi|283819719|gb|ADB41557.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74]
Length = 271
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E + + V I +D K++ A+ + +++G+ R GK
Sbjct: 1 MPELPEVEIRRQYLETSSLYQP-VSHIEVEDKKLLTTDLAT-LQQALIGRQFTGTRRVGK 58
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
NL++ D+P FGMTG + +Y +++ ++++ E G
Sbjct: 59 NLFIFTDAPDVIIHMHFGMTGDL--------EYYHASLDR-----PRFARIVFEFTSGFN 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F R+F +V L+ D + ++G D L ++++ +D + +KK IK +LLDQS
Sbjct: 106 LGFLCPRKFERVGLVTDVDAFLLRKKIGEDGL--DISLETLSDRVRRKKAFIKPVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
++G+GNW+ DEVL+QA IHP Q A +L+ + A+L I+ V E
Sbjct: 164 VVAGLGNWIVDEVLFQALIHPEQRADTLTNDQMASLHIAIRLVLET 209
>gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|399986772|ref|YP_006567121.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|166215635|sp|A0QV21.1|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|399231333|gb|AFP38826.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
Length = 285
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV +ALG
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDALGQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDR-SLDAYGREGEPCR 254
>gi|392989395|ref|YP_006487988.1| formamidopyrimidine-DNA glycosylase [Enterococcus hirae ATCC 9790]
gi|392336815|gb|AFM71097.1| formamidopyrimidine-DNA glycosylase [Enterococcus hirae ATCC 9790]
Length = 278
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + +GKKI K I ++I+ + FEAS++G+ ILS R+GK
Sbjct: 1 MPELPEVETVRKGLSRLVVGKKIQK-IQVLWPRIIEQPETAIFEASLVGEEILSIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL + + + ++G + + +E K++ +DG +L
Sbjct: 60 FLIFRLS-------HYELISHLRMEG-------KYQFVEKNEPIDKHTHVIFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ TS I +LGP+ L + +D F L K IK LLLDQ
Sbjct: 106 RYHDVRKFGRMTLVEKGTSDAYKGIMKLGPEPLPDTFLLDGFRLGLQKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L K I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWEAKIHPEQPADTLKPKEAELLRKAIIDVLSRAIEAGGTTIRSY 224
>gi|374608493|ref|ZP_09681292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tusciae JS617]
gi|373554025|gb|EHP80612.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tusciae JS617]
Length = 296
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 121/270 (44%), Gaps = 22/270 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H + K I + V +D A +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVVDKTITAVRVHHLRAVRRHEAGPADLTARLLDSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + +R D+ + + LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLLGAPTSAGARRQRPAPRDD----HLRIAALLDDGTT 116
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D T VP P++ + D L D L +K IK
Sbjct: 117 LSFVDQRTFGGWMLADVVTVDGTDVPLPVAHVARDPLDPKFNRDGVVTVLRRKHSEIKRQ 176
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++A ++ + A SL++ LL EV EALG
Sbjct: 177 LLDQTVVSGIGNIYADEALWRAHVNGARLASSLTRAKLGELLDAATEVMTEALGQGGTSF 236
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 237 DSLYVNVNGESGYFER-SLDAYGREGEPCR 265
>gi|377809858|ref|YP_005005079.1| formamidopyrimidine-DNA glycosylase [Pediococcus claussenii ATCC
BAA-344]
gi|361056599|gb|AEV95403.1| formamidopyrimidine-DNA glycosylase [Pediococcus claussenii ATCC
BAA-344]
Length = 279
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I + + D V + +F++++ GK IL R+GK
Sbjct: 1 MPELPEVETVRRGLEALVKGKTIKQVNVRYDKMV--SPNPDEFKSALKGKKILDIERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + AV E SK+ EL DG +L
Sbjct: 59 YLIFRF------SENLSMVSHLRMEG-------KYAVLPHTEPLSKHDHVIFELTDGSDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ +V ++ +GP+ E +T + + L KK+ +K+ LL+Q
Sbjct: 106 RYNDTRKFGRMNLVPSGKELTVGGLATIGPEPTPETLTFEYLSQRLRSKKVGMKSFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL 226
S ++G+GN DEVL+ K+HPLQ + +L+ E L L E+ A+
Sbjct: 166 SNVAGLGNIYVDEVLWLTKVHPLQPSNTLTDEEIKALRLNIFSELERAI 214
>gi|163847434|ref|YP_001635478.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus
J-10-fl]
gi|189044586|sp|A9WDC2.1|FPG_CHLAA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|163668723|gb|ABY35089.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus
J-10-fl]
Length = 278
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ G+ I D K++ S +F A + G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLT-PSPDEFAALIAGRRIEAIGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + M+G + + A +T E +++ F ++LD+G L
Sbjct: 60 WLLLSLDGEWTLAIHLRMSGQLLV-----------AEPETSE--ARHVHFALDLDNGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + GP+ L T + L ++ IKALLLDQ
Sbjct: 107 IFNDQRKFGRVHLLDRQGLAALDAVHGPEPLAADFTPSALAERLQNRRAPIKALLLDQHL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYKCY 236
I+GIGN A+E L+ A+IHPL L+ E L I+ V +EA+ G SL+ Y+
Sbjct: 167 IAGIGNIYANEALWLARIHPLTPGAMLTPEQINELHHAIRHVLQEAITNQGSSLRNYRDG 226
Query: 237 FAKPYVHKKH 246
+ + ++H
Sbjct: 227 YGRQGTQQEH 236
>gi|395203525|ref|ZP_10394716.1| DNA-formamidopyrimidine glycosylase [Propionibacterium humerusii
P08]
gi|422439794|ref|ZP_16516614.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA3]
gi|422471878|ref|ZP_16548369.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA2]
gi|422573633|ref|ZP_16649194.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL044PA1]
gi|313836650|gb|EFS74364.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA2]
gi|314928157|gb|EFS91988.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL044PA1]
gi|314972156|gb|EFT16253.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA3]
gi|328907981|gb|EGG27741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium humerusii
P08]
Length = 282
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 31/268 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD----FEASVLGKAILSAH 56
MPELPEVE R +E+H I +V+ + D + + + F+ ++ G +
Sbjct: 1 MPELPEVETVRAGLEDHVI-PAVVEGVDVIDARGLRPSGGPEDAALFQTALTGHQFTAVR 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW L+ GM+G + T+++ +++ + L+D
Sbjct: 60 RRGKYLWFVLNDGTAMLAHLGMSGQFRVVDRHATRHR-------------HTRIVIALND 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P+ + PD + VDE L +K T+K L
Sbjct: 107 GRDLRFLDQRTFGGLALAPLLDGIPGPVVHIAPDPFEKCFDVDEVARRLRTRKSTLKKSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-----------RE 224
LDQ+ +SGIGN ADE L++A+ HP LS+ LL+ +EV +
Sbjct: 167 LDQTLVSGIGNIYADETLWRARYHPETPCSYLSQPKAVELLQTAREVIAEAISAGGTSFD 226
Query: 225 ALGVSLQFYKCYFAKPYVHKKHRENKIC 252
AL V++ YF++ + REN+ C
Sbjct: 227 ALYVNVNGESGYFSR-VLDAYGRENQPC 253
>gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium
hydrogeniformans]
gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium
hydrogeniformans]
Length = 276
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE + + I K I + ++N + +S + + ++G I S R+G
Sbjct: 1 MPELPEVETVIKGLRPLIINKTITDLEVREENLIGYPDLSTVELKQMLIGAKIDSISRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + ++LD MTG + VK+ +E+ K++ LDDG E
Sbjct: 61 KYILIKLDINKILVIHLRMTGKLL-------------VKEVEEFRDKHTHIIFSLDDGQE 107
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ F + R+F ++ L++ P ++ LGP+ L + +++++F + + ++ IK+LLL+
Sbjct: 108 IRFNNVRKFGRIYLIDPDRPEQAGGLATLGPEPLSDQLSLEDFKNLFTNRRGVIKSLLLN 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
Q +I+GIGN ADE+LY + I P + A +LS+E + +K++ E
Sbjct: 168 QKFIAGIGNIYADEILYLSGIKPDRKADTLSEEEKEKIYFNMKDILE 214
>gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 286
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ +GK I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVEL 114
K LWL LD P P GM+G + + V + R SA+ L
Sbjct: 61 KYLWLVLDGPGQPDTALVVHLGMSGQMLLGEVPRADHVRISAL----------------L 104
Query: 115 DDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKI 169
DDG LSF D+R F L + D + VP P++ L D L D D L +K
Sbjct: 105 DDGTVLSFADQRTFGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHS 164
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG- 227
IK LLDQ+ +SGIGN ADE L++AK++ + A +LS+ +L EV R+AL
Sbjct: 165 EIKRQLLDQTVVSGIGNIYADEALWRAKVNGARIAATLSRRRLGAVLDAAAEVMRDALSQ 224
Query: 228 ---------VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 GGTSFDSLYVNVNGQSGYFDR-SLDAYGREGQNCR 258
>gi|386740668|ref|YP_006213848.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 31]
gi|384477362|gb|AFH91158.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 31]
Length = 285
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + +++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVVVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLN 213
>gi|433647038|ref|YP_007292040.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium smegmatis
JS623]
gi|433296815|gb|AGB22635.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium smegmatis
JS623]
Length = 285
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTITAVRVHHPRAVRRHEAGPADLTARLLDAKITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFFVELDDGL 118
K +WL LD GM+G + + E P++ + + LDDG
Sbjct: 61 KYMWLTLDDESALVVHLGMSGQMLLG----------------ELPNENHLRIATLLDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D T VP P++ L D L D L +K IK
Sbjct: 105 ALSFVDQRTFGGWMLADLVTVDGTDVPMPVAHLARDPLDPAFNRDGVVTVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ+ +SGIGN ADE L++A+I+ + A SLS+ A LL EV +ALG
Sbjct: 165 QLLDQTVVSGIGNIYADEALWRARINGARLASSLSRAKLAELLDAAAEVMSDALGQGGTS 224
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 FDSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>gi|366085719|ref|ZP_09452204.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus zeae KCTC 3804]
Length = 282
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 128/242 (52%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ I K + +I + K+ I+G+ F+ V+G A+ + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LIKSKRITAISTNWAKILINGLPT--FQKDVVGAAVTTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL++ M G Y+ A T + K+ DG +
Sbjct: 58 KYLLIRLNNGETIVSHLRMEGRYYVVSDAHTPF------------DKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL++ SVP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIHTGQEQSVPALAKLGPEP--TPATFDEAAFAQKLKRHHKAIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQ 231
LDQ+ ++GIGN ADEVL+ ++++PLQ A +L+K+ TL IKE+ A+ G S
Sbjct: 164 LDQTVVAGIGNIYADEVLWLSRLNPLQPADTLTKKEIHTLHDNIIKELDAAIAAGGTSAH 223
Query: 232 FY 233
Y
Sbjct: 224 TY 225
>gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064]
gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces clavuligerus ATCC 27064]
gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064]
Length = 289
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + V ++ A DF A + G ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L D+ GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWLPLADTDSSVLGHLGMSGQLL-------------VQPEDAADEKHLRIRISFDDSL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL F D+R F + L N P +P I+ + D L D F +L K+ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + SL++ A LL I++V A
Sbjct: 168 LLDQSLISGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNA 218
>gi|395236822|ref|ZP_10414972.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|423350252|ref|ZP_17327905.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|394488005|emb|CCI83060.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|404387775|gb|EJZ82877.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
Length = 276
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR + H +G + + A N+ DG E + G+++ +A R+
Sbjct: 1 MPELPEVEVVRRGLASHVVGAAFDSAEVLRARSNRGQDG----PLEPLLRGRSVTAARRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK LWL L GM+G + V+ D P ++++ + +
Sbjct: 57 GKYLWLELSDGRALFIHLGMSGQLR-------------VQPADTPPGRHTRVRLGMTGAA 103
Query: 119 E----LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
L F D+R F ++ +VP P++ + PD E E ++ +K+ IK
Sbjct: 104 GGRFFLDFVDQRTFGRLLATGMEGAVPAPVAHVAPDPFEESFDPVEVARTIRRKRSEIKR 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFY 233
+LLDQ +SGIGN ADE L+ AKI P + A +L ++ L+ + E R +G +L+
Sbjct: 164 VLLDQQVVSGIGNIYADEALWAAKIRPTKKATTLRQKDA---LRLLDEARAVMGRALEAG 220
Query: 234 KCYFAKPYVHKKHRENKICRLFKV 257
F + YV+ R V
Sbjct: 221 GTSFDELYVNVNGESGYFSRSLNV 244
>gi|427440031|ref|ZP_18924560.1| formamidopyrimidine-DNA glycosylase [Pediococcus lolii NGRI 0510Q]
gi|425787863|dbj|GAC45348.1| formamidopyrimidine-DNA glycosylase [Pediococcus lolii NGRI 0510Q]
Length = 279
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + ++ V A F A + K I + R+GK
Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTP--EADQFAAELKNKTIETIRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L S Q M + ++G + AV D D+ +K+ ELDDG +L
Sbjct: 59 YLIFDF------SNQLSMVSHLRMEG-------KYAVVDRDQPYNKHDHVIFELDDGQDL 105
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D R+F R++ PT V + +GP+ E +TVD T +L +K +K+ LL
Sbjct: 106 RYNDTRKFG--RMVLTPTGQEMQVGGLKTIGPEPTPETLTVDYLTKALRSRKRVMKSFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI-KEVREALG 227
DQS I+G+GN ADEVL+ +KIHP + + SL+ L + I E+ EA+
Sbjct: 164 DQSLIAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESIFAELNEAIA 215
>gi|383760975|ref|YP_005439957.1| formamidopyrimidine-DNA glycosylase [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381381243|dbj|BAL98059.1| formamidopyrimidine-DNA glycosylase [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 276
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ G+ +V + + + I A F V G+ R+GK
Sbjct: 1 MPELPEVEVYVQELKPLLAGRTVVSARVFWP-RTIAFPDAETFAMQVAGQRFAQFGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L L+S MTG +Y+ + + P ++ ++LD+ +L
Sbjct: 60 YMLLHLESGATMIVHLRMTGRLYLV-------------EANTSPGPHTHVVMKLDNERQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F ++ L +P +V +++LGP+ T + F +L + +IKALLLDQS
Sbjct: 107 VFQDTRKFGRIWLTTEPMAV--LAKLGPEPFDPAFTDEAFARALRNRSASIKALLLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN ADE L++A+IHP + SL +E L + I++V
Sbjct: 165 VAGVGNIYADEALFRARIHPARPGGSLREEEVTALREAIRQV 206
>gi|298242821|ref|ZP_06966628.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM
44963]
gi|297555875|gb|EFH89739.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM
44963]
Length = 308
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 29/280 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ +G I ++ + + ++I DF A + G+ I R+GK
Sbjct: 1 MPELPEVEYTARQLQASIVGATIREAQVFWE-RIIAHPLPEDFCAQISGRTIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE------- 113
L L L MTG + T +D W ++ F +E
Sbjct: 60 FLLLDLSGEGLLIIHRRMTGNFLLLEPGWTLDTSLRERDAQAWSTRGPSFTLETDGSQAY 119
Query: 114 ------------LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT 161
L+DG L FTD+R+F +V L + LGP+ L E ++
Sbjct: 120 SSEMNYCRVCFILEDGRNLLFTDQRKFGRVSLWQRSQEEEVLRGLGPEPLSEAFNIEGLA 179
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+L+ ++ IK +LLDQ+ I+G+GN ADE L+ A+IHP + A SL+ + A+L + +
Sbjct: 180 QALAHRRSPIKQVLLDQTVIAGVGNIYADEALFHARIHPRRAANSLTSQEIASLHEAVVS 239
Query: 222 VR----EALGVSLQFYKCYFAKP-----YVHKKHRENKIC 252
V E G S Y+ + + +VH + K C
Sbjct: 240 VLLKAIEHGGTSFSSYRDLWGEAGDNYNHVHVYKQAGKPC 279
>gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101299|sp|Q3ABL4.3|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 263
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 27/257 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + +GK I + + K+I VS +F V+GK I++ R+GK
Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLP-KIIKNVSVEEFTRRVVGKEIVALKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + MTG + I + + KD K++ +L D LEL
Sbjct: 60 YLLIDLSGKETVTVHLRMTGKLLI-------LPKGSPKD------KHTHAIFDLGD-LEL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + E+GP+ L + T + L + +KA+LLDQ
Sbjct: 106 HFNDIRQFGGFSF--------EMPEIGPEPLEDEFTPEYLKTKLKASQKNLKAVLLDQKI 157
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
I+GIGN ADE+L++A + P + A SLS++ L K I+++ ALG+ Y+ +
Sbjct: 158 IAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKIL-ALGIE---YRGTSIRD 213
Query: 241 YVHKKHRENKICRLFKV 257
YV ++++ RL KV
Sbjct: 214 YVDAENQQGSFQRLLKV 230
>gi|260887311|ref|ZP_05898574.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC
35185]
gi|330838935|ref|YP_004413515.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC
35185]
gi|260862947|gb|EEX77447.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC
35185]
gi|329746699|gb|AEC00056.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC
35185]
Length = 477
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 25/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ G++I + + + I F + V G+ IL R+GK
Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITEVDVLLP-RTIRFPEVEAFRSRVRGQRILCLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+S MTG Y +D D ++ + LDDG L
Sbjct: 60 YLMLPLESGETLLLHLRMTGRFY-------------RRDADTPTGRHVRAIFHLDDGSCL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R F ++ LL + + P S +GP+ L E D++ K IK+ LLDQ
Sbjct: 107 FFEDVRTFGEIHLLQPQERKAFPAFSCMGPEPLTEEFDASYLYDAMQKSSQRIKSFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYK 234
++G+GN DE L+ A +HPL+ A +L+ + L + I +V E G + + Y
Sbjct: 167 GKVAGLGNIYVDEALFFAGVHPLRRAHTLNHDEAFRLWQAINKVIAEGIEDGGTTFRDYV 226
Query: 235 CYFAKPYVHKK-----HRENKIC 252
K H++ HRE + C
Sbjct: 227 DGEGKSGFHQQKLRVYHREGEPC 249
>gi|3850130|emb|CAA21931.1| hypothetical protein [Candida albicans]
Length = 372
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 68/294 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSA-- 55
MPE+ EV ++ + +G +I K + D V+ + ++ E + + KA+ +A
Sbjct: 1 MPEVAEVSHVCALLKRNILGFRITKVNLLHDPLLFPVLKDTNNAEKELNKMRKALTNAVV 60
Query: 56 ---HRKGKNLWLRLDSPPFPS---FQFGMTGAIYIKGV--------------AVTQYKRS 95
R GK W+RL++ + FGMTG + ++ V A+ + +R
Sbjct: 61 TSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMVKLRNVHSHLAFMENGGDKKALEKLERF 120
Query: 96 AVKDT---------DEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN------DP 137
KD+ EWP +++KF +EL++ LE +F+D RR A+VRLL+ D
Sbjct: 121 RYKDSRIKPDVEVKQEWPPRFTKFDMELENNDKKLEFAFSDPRRLARVRLLSGLEVSTDE 180
Query: 138 T--SVPPISELGPD--------ALLEP---------------MTVDEFTDSLSKKKITIK 172
+ + P+ LGPD EP +++DEF+ + KK IK
Sbjct: 181 SLLKLSPLDALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALILSKKKPIK 240
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
+LLLDQ+Y +G+GNWVADEVL+QA IHP + S + + IK++ ++L
Sbjct: 241 SLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDSL 294
>gi|83816661|ref|YP_444607.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855]
gi|83758055|gb|ABC46168.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855]
Length = 265
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+ RR + + + + I + + D + DG+ + G+ + HR GK
Sbjct: 1 MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLEPHRLGEVLRGRTLTDTHRHGK 60
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++++R + + + FGMTG + + D +Y+ V +DG
Sbjct: 61 HVFVRYGEETGWLALHFGMTGRVQVV--------------PDGTMPEYAYVQVHFEDGGA 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+F R+FA+VRL++ P + +LGPDA VD F + ++ IK LLDQS
Sbjct: 107 LAFECPRKFARVRLVDTPDAFVEAKDLGPDARR--ADVDAFLAPFASRRGAIKGRLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
++G+GN ADE LYQ IHP T LS+ L I+ V +A
Sbjct: 165 VVAGLGNIYADEALYQEGIHPRTTVPELSETDLRGLYDAIQRVLDA 210
>gi|241896103|ref|ZP_04783399.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides
ATCC 33313]
gi|241870617|gb|EER74368.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides
ATCC 33313]
Length = 278
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + + V+S K + G +A +F+ ++ + IL R+GK
Sbjct: 1 MPELPEVETVRRGLT-NLVAGRTVESTEVRWEKTVGGFTAEEFDQALRNQTILKIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M G+ Y P K+ LD G++L
Sbjct: 60 YLLFRFTGGITMVSHLRMEGSYYTVPAGTK-------------PGKHDLVTFHLDHGVDL 106
Query: 121 SFTDKRRFAKVRLL-NDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ ND +V ++ +GP+ + +T+D K K+ +K LL+Q
Sbjct: 107 FYRDTRKFGRMNIVPNDQVMTVAGLATIGPEPTEDTLTLDYMISEFGKSKMHVKPFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
++I+G+GN DE L+Q+KIHPL A L+ + A L K I
Sbjct: 167 NHIAGLGNIYVDETLWQSKIHPLTAANQLTTDELAILRKNI 207
>gi|407983093|ref|ZP_11163754.1| formamidopyrimidine-DNA glycosylase [Mycobacterium hassiacum DSM
44199]
gi|407375376|gb|EKF24331.1| formamidopyrimidine-DNA glycosylase [Mycobacterium hassiacum DSM
44199]
Length = 291
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H + + I + V +D A +LG I+ R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVVDRTITAVRVHHPRAVRRHEAGPADLTARLLGARIIGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + G + R A LDDG
Sbjct: 61 KYLWLSLDDGAALVVHLGMSGQMLLGGTPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D VP P++ L D L D L +K IK
Sbjct: 106 LSFVDQRTFGGWLIADMVTVDGADVPAPVAHLARDPLDPWFDRDAVVTVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++A+I+ + A SLS+ A LL +V R+AL
Sbjct: 166 LLDQTVVSGIGNIYADEALWRARINGARPASSLSRPRLAELLDHAADVMRDALAQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>gi|339634095|ref|YP_004725736.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella koreensis KACC 15510]
gi|420161440|ref|ZP_14668205.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|420161577|ref|ZP_14668341.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|338853891|gb|AEJ23057.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella koreensis KACC 15510]
gi|394745115|gb|EJF34011.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|394745417|gb|EJF34301.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
Length = 275
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I+K + + V G+S ++F+A + + I R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVQGRTILKVEVRWEKIV--GMSEAEFDAEMADRKIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M GA Y P K+ LDD ++L
Sbjct: 59 YLLFRLSGNKTLVSHLRMEGAYYTVPAGTE-------------PGKHDLITFHLDDEIDL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ P + V ++++GP+ + +T+ E+ ++K IK LLDQ
Sbjct: 106 FYRDTRKFGRMNLVDTPNTMQVAGLAKIGPEPTEDDLTL-EYMQKEFQRKGAIKPFLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
S+I+G+GN DE L+ AKIHPLQ A ++ E L K I
Sbjct: 165 SHIAGLGNIYVDETLWMAKIHPLQPANTIDLEHLTHLRKAI 205
>gi|389866044|ref|YP_006368285.1| formamidopyrimidine-DNA glycosylase [Modestobacter marinus]
gi|388488248|emb|CCH89821.1| Formamidopyrimidine-DNA glycosylase [Modestobacter marinus]
Length = 294
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 27/254 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + V + A F A++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLDRWVTGRTIAEVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60
Query: 60 KNLWLRL-DSPPFPSFQ-----FGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL + +S P+ Q GM+G + ++ ++ DE + F
Sbjct: 61 KYLWLPVAESDGTPTGQALVAHLGMSGQLLVE----------KPEEADEVHLRARFRFT- 109
Query: 114 LDDGLELSFTDKRRFAKVRLLND----PTSVPP-ISELGPDALLEPMTVDEFTDSLSKKK 168
D G EL F D+R F + + + P VPP ++ + D L + VD F+ +L ++
Sbjct: 110 -DGGRELRFVDQRTFGGLAVEDGAGTGPADVPPRLAHIAIDPLDDAFDVDAFSAALRRRH 168
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGV 228
+K LLDQ+ I G+GN ADE L++A++H + L++ A LL+ +++V LG
Sbjct: 169 TEVKRALLDQTLIGGVGNIYADESLWRARLHGARPTDKLTRAQVADLLEGVRDV---LGE 225
Query: 229 SLQFYKCYFAKPYV 242
SL+ F YV
Sbjct: 226 SLEQGGTSFDSLYV 239
>gi|429730865|ref|ZP_19265511.1| DNA-formamidopyrimidine glycosylase [Corynebacterium durum F0235]
gi|429147303|gb|EKX90333.1| DNA-formamidopyrimidine glycosylase [Corynebacterium durum F0235]
Length = 284
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 23/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+H G+ +V + + D E + G + + R+GK
Sbjct: 1 MPELPEVEVVRRGLEQHVQGRTLVGPEVLHPRAARHNTTPRDVEKHLDGAVVQAVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL L GM+G + +KG T ++ + + V LDDG +L
Sbjct: 61 FLWLVLGDEAL-LVHLGMSGQMLMKGPEETTHR-------------HLRARVHLDDGNQL 106
Query: 121 SFTDKRRFAK---VRLLNDPT-----SVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
F D+R F V L++ P +P I+ + PD L + + + ++ +K +
Sbjct: 107 WFVDQRTFGYWSVVPLIDAPVPSAHQRIPASIAHIAPDLLDPTLDLSDLARTVKQKDTEL 166
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
K +LLDQ +SGIGN ADE+L+QA +H Q A ++ +LL+ + V E
Sbjct: 167 KRVLLDQRVVSGIGNIYADEMLWQAGLHGRQRASRIATSRLVSLLEAGQSVME 219
>gi|258652623|ref|YP_003201779.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM
44233]
gi|258555848|gb|ACV78790.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM
44233]
Length = 288
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 34/247 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ARR + + + ++I + D+ V ++ ++++G+ +AHR+GK
Sbjct: 1 MPELPEVESARRVLADGALHRRIA-DVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGK 59
Query: 61 NLWLRL----DSPPFP---------SFQFGMTGAIYIKGVAVTQ----------YKRSAV 97
++WL + D P P GM+G + + G + + Y+R
Sbjct: 60 SMWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDRE 119
Query: 98 KDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-LEPMT 156
+ D Y +F V DG + D RR ++VRL P I LGPDAL L P
Sbjct: 120 QFVDR--GAYQRFAVTFADGGRMRLLDPRRLSRVRL------DPDIQALGPDALGLSPTA 171
Query: 157 V-DEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
T +KA LLDQS ++G+GN +ADE L++AKI+P + +LS L
Sbjct: 172 FRTAMTAGRRVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQLNRL 231
Query: 216 LKCIKEV 222
+ ++
Sbjct: 232 GRAVQSA 238
>gi|433449547|ref|ZP_20412411.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella ceti NC36]
gi|429539061|gb|ELA07099.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella ceti NC36]
Length = 278
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 20/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I +S+ +K I ++ +F+A + G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGQTI-ESVEVRWDKTISNMTPEEFDAEIAGRTIEVVERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M GA Y P K+ +L D ++L
Sbjct: 60 YLLFRLSGKKTLVSHLRMEGAYYTMPAGTE-------------PGKHDLVTFKLTDDIDL 106
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ND SV ++++GP+ E + ++ K + IK LLDQ
Sbjct: 107 FYRDTRKFGRMALVNDTDVMSVAGLAKIGPEPTEEALDLEYMVTIFGKSRTAIKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL---GVSLQFYK 234
S I+GIGN ADEVL+Q IHPL ++ A L L I E+ ++ G ++ +
Sbjct: 167 SKIAGIGNIYADEVLWQTMIHPLTKTNDVTPTELAELRLNIINEMARSIAHHGTTVHSFT 226
Query: 235 CYFAK 239
F +
Sbjct: 227 DAFGE 231
>gi|379058022|ref|ZP_09848548.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serinicoccus profundi MCCC 1A05965]
Length = 302
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 114/249 (45%), Gaps = 35/249 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR + EH +G++I + + ++V D A V G +L A R+
Sbjct: 1 MPELPEVEVVRRGLAEHVVGRRIETATLTG-HRVARRHAAGPGDLTARVAGATVLEADRR 59
Query: 59 GKNLWLRL----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
GK LWL L D P GM+G + ++ + K
Sbjct: 60 GKYLWLVLQAPGDDPQALVVHLGMSGQLLVEAADAPREK------------HLHATLDFA 107
Query: 115 DDGLELSFTDKRRFAKVRLLN-------DPTS-------VP-PISELGPDALLEPMTVDE 159
DDG +L F D+R F + L DP+ +P P+ + PD L +
Sbjct: 108 DDGPQLRFVDQRTFGGLALTPLHPDRAPDPSGAGGHAHGIPEPVLHIAPDPLEDAFDRPG 167
Query: 160 FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ K + IK LLLDQ +SGIGN ADE L++A++H + A +L++ + LL
Sbjct: 168 VIRRMKAKDVAIKRLLLDQGLVSGIGNIYADEALWRAQVHGRRPAAALTRPALGRLLDHA 227
Query: 220 KEV-REALG 227
EV R ALG
Sbjct: 228 AEVMRAALG 236
>gi|383754332|ref|YP_005433235.1| putative formamidopyrimidine-DNA glycosylase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366384|dbj|BAL83212.1| putative formamidopyrimidine-DNA glycosylase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 276
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 25/264 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR ++ GKKI+ I ++I F A V G+ I R+GK
Sbjct: 1 MPEMPEVEIIRRYLDTQVAGKKIMDLDIRLP-RMIKWPDTEGFRALVTGRTIKKMARRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ F MTG R + T +++ +L++G L
Sbjct: 60 YLLMELDNDNEVVFHLRMTG-------------RLVYEPTGNTADSHARVIFQLENGGAL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R + L + + ++E+GP+ L T + S++K IK+ LL+Q
Sbjct: 107 VYGDTRTLGTIHGLKPQELIMLKGLAEMGPEPLSVEFTPAYLEQAASQRKTAIKSFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYK 234
YI GIGN ADE L+ A IHPL+ A SLS E C L + + +V E G + + Y+
Sbjct: 167 KYIGGIGNIYADEALFLAGIHPLRPAKSLSAEECRRLWESVNQVIAAGIEDGGTTFRDYQ 226
Query: 235 CYFAKPYVHKKH-----RENKICR 253
H++H R+ + CR
Sbjct: 227 NGEGGKGSHQEHLYVYGRKGEPCR 250
>gi|433443887|ref|ZP_20409010.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
TNO-09.006]
gi|432001861|gb|ELK22728.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
TNO-09.006]
Length = 273
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +GK I + + +K+I + F + G+ I R+GK
Sbjct: 1 MPELPEVEMVRRTLLPLVVGKTI-ERVKVHWSKIIQHPDVATFCECLKGQTIHDIQRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G R + D +++ F D EL
Sbjct: 60 FLLFQLDDVVLVS-HLRMEG-------------RYIYEKEDAPFDQHTHIFFTFTDQTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L N + VPP+S +G + E TV TD L + K TIKA LLDQ
Sbjct: 106 RYRDVRKFGTMHLFNKGEEFRVPPLSSIGVEPFDEQFTVAWLTDRLQRTKRTIKATLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ ++G+GN DEVL+++ IHP +TA +L+ L ++ I+E E G +++ Y
Sbjct: 166 TIVAGLGNIYVDEVLFRSSIHPERTATTLTIREIEALHEAIVQTIQEAIEKGGSTVRTY 224
>gi|337291061|ref|YP_004630082.1| formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans
BR-AD22]
gi|334699367|gb|AEG84163.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans
BR-AD22]
Length = 285
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLRGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK LW LD GM+G + IK D +++ L D
Sbjct: 60 GKFLWFVLDDSCALMVHLGMSGQMLIK-------------HADAHSHPHTRIRCSLSDEE 106
Query: 119 ---ELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKI 169
EL F D+R F RL + VP P++ + D LLEP T L K K +
Sbjct: 107 ARGELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPAQDLMATARLIKSKHV 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
IK LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+
Sbjct: 166 EIKKLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLR 213
>gi|408492073|ref|YP_006868442.1| formamidopyrimidine-DNA glycosylase MutM [Psychroflexus torquis
ATCC 700755]
gi|408469348|gb|AFU69692.1| formamidopyrimidine-DNA glycosylase MutM [Psychroflexus torquis
ATCC 700755]
Length = 260
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ + I+ + ++I + + D K++ A DF+A + + ++ R GK
Sbjct: 1 MPELPEVQGYKTYIDSTSLHQRITE-VDCRDTKLLKKPKA-DFDAYLYNQELIETQRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+L+ FGMTG R +E K+ + ++G
Sbjct: 59 YLFLKTTGKKILVMHFGMTG-------------RPHYYKNEEDRPKFGHLELSFENGFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F L++ +L DA +T+++F S + +K IK +++DQS
Sbjct: 106 AFENKRKFGWWDLIDSIADFKASHKLSDDA--RDLTLEDFKQSFNGRKTDIKKIIMDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
+G+GNW+ADE+LYQ+KIHP + + ++ ++ +K+V E + YK F K
Sbjct: 164 AAGVGNWMADEILYQSKIHPTKKVIEMTDTDIKSVFDAMKKVIEVAIENHAHYKD-FPKT 222
Query: 241 YVHKKHRENKIC 252
++ +E C
Sbjct: 223 FLMHFRKEGATC 234
>gi|306490830|gb|ADM94950.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 22/229 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K+I K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKKVINKRINK-IKVNLPRLIKKPTIDEFSRRLKGTYITKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-------SKYSKFFVE 113
+ L+S F GM+G + + +T+E P K+ F
Sbjct: 60 YILCFLNSGECLVFHLGMSGCL--------------LYETNELPISIIDINKKHFHVFFF 105
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+D ++ + D R+F K+ LL + + LG + L E T+D+FT + KK IK+
Sbjct: 106 FEDNTKMIYNDVRQFGKIWLLKKDDKLTEVESLGLEPLEEDFTIDKFTRIIENKKSNIKS 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+++Q +I+GIGN A+E+L++A IHPL+ + SL+ L IK+
Sbjct: 166 LIMNQKHIAGIGNIYANEILFRAGIHPLRRSNSLTTHEIKKLYYSIKDT 214
>gi|392425102|ref|YP_006466096.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus
acidiphilus SJ4]
gi|391355065|gb|AFM40764.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus
acidiphilus SJ4]
Length = 273
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H +I K I + G DF+ VLG+ IL+ R+GK
Sbjct: 1 MPELPEVETIRRTLAVHITDLRI-KDISLKWPSAVSGWRDKDFKELVLGRQILALDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD MTG R + P K++ + L+ G E+
Sbjct: 60 YLLIHLDEEITLIAHMRMTG-------------RLNYYPEPKEPDKHTHVVLTLERG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F+D R+F +++ + PTS+ +S+LGP+ L T + D L+KKK+ IK LL
Sbjct: 106 HFSDVRKFGRIQAI--PTSLCIQESSLSKLGPEPLDPQFTANMLRDRLAKKKVNIKGALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQF 232
DQ ++G+GN ADE L++A I P + A SL+ E L + I+ V + A G S +
Sbjct: 164 DQHVLAGLGNIYADESLFRAGISPQRPANSLTDEEIKHLHRAIQAVLQAGIDARGTSFRD 223
Query: 233 YK 234
Y+
Sbjct: 224 YR 225
>gi|384515973|ref|YP_005711065.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans 809]
gi|334697174|gb|AEG81971.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans 809]
Length = 285
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 114/225 (50%), Gaps = 20/225 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLRGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK LW LD GM+G + IK + + ++ + + +
Sbjct: 60 GKFLWFILDDSCALMVHLGMSGQMLIKHANAHSHPHTRIRCS----------LSDEEARG 109
Query: 119 ELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITIK 172
EL F D+R F RL + VP P++ + D LLEP T L K K + IK
Sbjct: 110 ELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPAQDLMATARLIKSKHVEIK 168
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+
Sbjct: 169 KLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLR 213
>gi|427392236|ref|ZP_18886241.1| formamidopyrimidine-DNA glycosylase [Alloiococcus otitis ATCC
51267]
gi|425731642|gb|EKU94457.1| formamidopyrimidine-DNA glycosylase [Alloiococcus otitis ATCC
51267]
Length = 274
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ RR +E +GK I + + DN + S F+ +LG+ I R+GK
Sbjct: 1 MPELPEVESVRRGLEAQVVGKTIQEVQVYWDNIIESPKPVSQFKRRLLGQTIHQVKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G + + D D +K+S DG +L
Sbjct: 61 LLLFYLDQDVLIS-HLRMEG-------------KYGLLDQDAPLTKHSHVIFNFRDGTQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ +++LGP+ E +T++ L+ K IK++LLDQ
Sbjct: 107 RYEDVRKFGRMSLVEKGKEAQHKSLAQLGPEPTFEDLTLEWMLTFLAHKTRAIKSILLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFYK 234
+ G+GN ADE+L+QA+I P + SL+ E L +K ++E G +++ YK
Sbjct: 167 KLLVGVGNIYADEILFQARIQPDRPGGSLTNEEVEALRQAAIKILQEATLRGGSTVRSYK 226
>gi|260574420|ref|ZP_05842424.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2]
gi|259023316|gb|EEW26608.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2]
Length = 283
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ IV + + + + + A + G +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMAGQTIVAAQV--NRPDLRWPFPPNMAARLTGARVLGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G + + G + Q+ + P+K+ ++++ G +
Sbjct: 59 YLLADLSSGETLLIHLGMSGRMLVSGAMLGQFHHA-----HPAPAKHDHVVLDMESGARV 113
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ + S P ++ LGP+ L +L + IK+ LLDQ
Sbjct: 114 TFNDARRFGAMDLMATDGAESHPLLASLGPEPLGNAFDESVLAAALKNRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYK 234
++G+GN EVL++A+++P A SL+ E A+L+ I++V EA G SL+ Y+
Sbjct: 174 HVVAGLGNIYVCEVLFRARLNPAAKAGSLTPEQTASLVPIIRQVLSEAIEAGGSSLRDYR 233
Query: 235 ------CYFAKPYVHKKHRENKIC 252
YF + H RE + C
Sbjct: 234 QTDGELGYFQHRF-HVYDREGQPC 256
>gi|441509919|ref|ZP_20991831.1| formamidopyrimidine-DNA glycosylase [Gordonia aichiensis NBRC
108223]
gi|441445934|dbj|GAC49792.1| formamidopyrimidine-DNA glycosylase [Gordonia aichiensis NBRC
108223]
Length = 293
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRAGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLIGRLRGATILAARRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P GM+G + + V + V+ T L
Sbjct: 61 KYLWLDVAAPQGDDRFALVVHLGMSGQMLVARVGAPDHTHLRVRAT-------------L 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A V L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGVELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
+ K +K LLDQS ISG+GN ADE L++A+++ + +SK A LL EV
Sbjct: 168 MRGKHTEVKRALLDQSLISGVGNIYADEALWRARLNGTRVTDGISKAKLAELLDAATEVM 227
Query: 224 -----------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + ++ R + CR
Sbjct: 228 SDALAVGGTSFDALYVNVNGQSGYFERS-LNAYGRAGQPCR 267
>gi|392968793|ref|ZP_10334209.1| DNA-formamidopyrimidine glycosylase [Fibrisoma limi BUZ 3]
gi|387843155|emb|CCH56263.1| DNA-formamidopyrimidine glycosylase [Fibrisoma limi BUZ 3]
Length = 275
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 121/226 (53%), Gaps = 24/226 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEA---SVLGKAILSAHR 57
MPELPEVE R+ +E + + I + + +D K++ +D++ ++G+ + R
Sbjct: 1 MPELPEVEIRRQYLETSSLHQTI-EHVEVEDKKLL----TTDYQTLIEKLIGRQFVGTRR 55
Query: 58 KGKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
GKNL++ D P FGMTG + +Y ++V ++++ +
Sbjct: 56 VGKNLFVVTDVPNVIVHMHFGMTGDL--------EYYHASVDR-----PRFARIVFAFSN 102
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G L F R+F ++ L++D + ++G D L ++V++F +++ +KK IK +LL
Sbjct: 103 GFNLGFLCPRKFERIGLVDDINAYLERKKIGDDGL--AISVEQFAEAVRRKKSLIKPVLL 160
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQS ++G+GNW+ DEVL+QA +HP Q A +L+ L I+ V
Sbjct: 161 DQSTVAGLGNWIVDEVLFQAYVHPEQRANTLTDAQIHQLHSSIQLV 206
>gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
20284]
gi|418068944|ref|ZP_12706224.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus acidilactici MA18/5M]
gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
20284]
gi|357537677|gb|EHJ21700.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus acidilactici MA18/5M]
Length = 279
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + ++ V A F A + K I + R+GK
Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTP--EADQFAAELKNKTIETIRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L S Q M + ++G + AV D D+ +K+ ELDDG +L
Sbjct: 59 YLIFDF------SNQLSMVSHLRMEG-------KYAVVDRDQPYNKHDHVIFELDDGQDL 105
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D R+F R++ PT V + +GP+ E +T+D T +L +K +K+ LL
Sbjct: 106 RYNDTRKFG--RMVLTPTGQEMQVGGLKTIGPEPTPETLTLDYLTKALRSRKRVMKSFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI-KEVREALG 227
DQS I+G+GN ADEVL+ +KIHP + + SL+ L + I E+ EA+
Sbjct: 164 DQSLIAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESIFAELNEAIA 215
>gi|399517759|ref|ZP_10759296.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc
pseudomesenteroides 4882]
gi|398647285|emb|CCJ67323.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc
pseudomesenteroides 4882]
Length = 277
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG V ++ KVI G S + F V+ R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGTT-VTAVNVPYPKVITGDSQA-FVTGVMQATFTKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL S Q + + ++G QY + T P K+++ EL D L
Sbjct: 59 YLLLRL------SNQHTIVSHLRMEG----QYSVEPIGTT---PYKHTEIIFELADDRAL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LGP+ +T+ ++ SK K IK LLD
Sbjct: 106 FYNDTRRFGRMVLATTGHESLVSPSLAKLGPEPTETDLTLPYMINAFSKSKKPIKTFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL---GVSLQFY 233
Q+ I+GIGN ADEVL+Q+KIHP LSK A L I E+ A+ G ++ +
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPTNQLSKLQLAILRTNIIAEIARAIKHHGTTVHSF 225
Query: 234 KCYFAK 239
F +
Sbjct: 226 SNVFGE 231
>gi|171780160|ref|ZP_02921064.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281508|gb|EDT46943.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 273
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G++IV + V +SA FE+ +LG+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLERLIVGREIVSVDVRVPKMVKTDLSA--FESDLLGQTIQSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + ++ +D K+ F LDDG L
Sbjct: 59 YLLLNLDEQVIIS-HLRMEGKYLL-------FEHQVPED------KHFHIFFGLDDGSTL 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L+ N + +LGP+ E V EFT LS K IK LLDQ
Sbjct: 105 VYKDVRKFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
+ ++G+GN DEVL+ AKIHP + A SL K
Sbjct: 165 TLVAGLGNIYVDEVLWAAKIHPERQANSLQK 195
>gi|387138931|ref|YP_005694910.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389850685|ref|YP_006352920.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 258]
gi|349735409|gb|AEQ06887.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388247991|gb|AFK16982.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 258]
Length = 285
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLL-----NDPTSVPPISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ ++ + P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLAPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLN 213
>gi|418048327|ref|ZP_12686415.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium rhodesiae JS60]
gi|353193997|gb|EHB59501.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium rhodesiae JS60]
Length = 288
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVAGKTITAVRVHHPRAVRRHEAGAADLTARLLDAQITGTDRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D GM+G + + + T + R A LDDG
Sbjct: 61 KYLWLNLSDDETALVVHLGMSGQMLLGEIPNTNHLRIATL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F +L + D + VP P++ + D L + L +K IK
Sbjct: 106 TLSFVDQRTFGGWQLADLVEVDGSRVPEPVAHIARDPLDPLFDREAVVTVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG 227
LLDQ+ +SG+GN ADE L++ KI+ + A +L++ LL EV REALG
Sbjct: 166 QLLDQTVVSGVGNIYADESLWRVKINGARLAANLTRRQLGELLDAATEVMREALG 220
>gi|300858756|ref|YP_003783739.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis FRC41]
gi|375288937|ref|YP_005123478.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 3/99-5]
gi|379715634|ref|YP_005303971.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 316]
gi|383314515|ref|YP_005375370.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis P54B96]
gi|384504931|ref|YP_005681601.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 1002]
gi|384507028|ref|YP_005683697.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis C231]
gi|384509116|ref|YP_005685784.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis I19]
gi|384511206|ref|YP_005690784.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis PAT10]
gi|385807816|ref|YP_005844213.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 267]
gi|387136855|ref|YP_005692835.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|300686210|gb|ADK29132.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis FRC41]
gi|302206462|gb|ADL10804.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis C231]
gi|302331017|gb|ADL21211.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 1002]
gi|308276704|gb|ADO26603.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis I19]
gi|341825145|gb|AEK92666.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis PAT10]
gi|348607300|gb|AEP70573.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|371576226|gb|AEX39829.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 3/99-5]
gi|377654340|gb|AFB72689.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 316]
gi|380870016|gb|AFF22490.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis P54B96]
gi|383805209|gb|AFH52288.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 267]
Length = 285
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 113/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLN 213
>gi|392400863|ref|YP_006437463.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis Cp162]
gi|390531941|gb|AFM07670.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis Cp162]
Length = 285
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 113/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHVVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLN 213
>gi|88813702|ref|ZP_01128929.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231]
gi|88789056|gb|EAR20196.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231]
Length = 272
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 21/251 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE H G++I K II D + A + + I+ R+ K
Sbjct: 1 MPELPEVETTRRGIEPHVRGRRIAKIIIRDAR--LRWPIAENLPRQAEDRRIIGIQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL++ GM+G++ + A +D P ++ + L G L
Sbjct: 59 YLLFRLEADATLILHLGMSGSLRL----------VAAQDP---PLAHAHLDIILASGQAL 105
Query: 121 SFTDKRRFAKVR-LLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+TD RRF + DP ++ LGP+ L D ++I KALL+D
Sbjct: 106 RYTDPRRFGSLHWCTGDPAQHHLLASLGPEPLSSAFHADYLYGLSRGRRICAKALLMDSR 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK----EVREALGVSLQFYKC 235
+ GIGN A+E LY+A I P+++A + + A L++ +K E EA G +L+ +
Sbjct: 166 AVVGIGNIYANEALYRAAIRPMRSAGCIGRNRYARLVQAVKSVLAEAIEAGGTTLRDFTD 225
Query: 236 YFAKP-YVHKK 245
+P Y H++
Sbjct: 226 STGQPGYFHRR 236
>gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA
glycosylase [Rubrobacter xylanophilus DSM 9941]
gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rubrobacter xylanophilus DSM 9941]
Length = 286
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + + +G +I ++ + + +++ +F + G + A R+ K
Sbjct: 1 MPELPEVETIKNDLRGLVVGSRIERAEVREP-ALVEQPPQEEFVRRLGGARVTGARRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L + LD+ FQ + G + + V +E P + LD G L
Sbjct: 60 HLVVELDTGEALVFQLKIGGQLLL------------VPPVEE-PEDSVMLVLSLDGGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
D+ F++ RLL + +S LGP+ E TV + L ++ IK LLLDQS
Sbjct: 107 LLRDQTGFSRARLLGEKELAERLSGLGPEPFSEEFTVRYLKERLGSRRAQIKPLLLDQSL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKCY 236
ISGIGN ADE+LY A++ P + A SLS+E L I+ E G +++ Y+
Sbjct: 167 ISGIGNIYADEILYDARLSPRRRASSLSEEEWERLYAAIRSNLAAGIEHRGTTVRLYRDV 226
Query: 237 FAKPYVHKKH 246
+ H+ H
Sbjct: 227 LGRAGEHQNH 236
>gi|156060539|ref|XP_001596192.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980]
gi|154699816|gb|EDN99554.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 389
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 40/228 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I ++ +GK + DD V G SA++F+ ++ GK +
Sbjct: 1 MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKV------ 54
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVEL- 114
+ T I ++ KD E WP K+SKF ++
Sbjct: 55 -------------DDYVLAATSGISLR--------HDGSKDEGEKEVWPPKFSKFSLQTA 93
Query: 115 -DDGLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKK 167
+ ++ +FTD RRF+++RL++ + P+ E GPD +++ +T + L+KK
Sbjct: 94 EEPKVDAAFTDSRRFSRIRLVDCVAGAIRNTTPLKENGPDPVIDKDILTAEWLEQKLNKK 153
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
++ IKALLLDQ+ ISGIGNWV DE+LY+A++HP Q + + S E L
Sbjct: 154 QVPIKALLLDQANISGIGNWVGDEILYRARLHPEQYSNTFSSEEIKRL 201
>gi|339496613|ref|ZP_08657589.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 277
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG V ++ KVI G S + F V+ R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGAT-VTAVNVPYPKVITGDSQA-FVTGVMQATFTKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL S Q + + ++G QY + T P K+++ EL D L
Sbjct: 59 YLLLRL------SNQHTIVSHLRMEG----QYSVEPIGTT---PYKHTEIIFELADDRAL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LGP+ +T+ ++ SK K IK LLD
Sbjct: 106 FYNDTRRFGRMVLATTGHESIVSPSLAKLGPEPTEVDLTLPYMINAFSKSKKPIKTFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQFY 233
Q+ I+GIGN ADEVL+Q+KIHP LS+ A L I E+ A+ G ++ +
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPTNQLSESQLAVLRSNIISEIARAIKHHGTTVHSF 225
Query: 234 KCYFAK 239
F +
Sbjct: 226 SNVFGE 231
>gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
JJ]
gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
JJ]
Length = 281
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RA+ G+ + ++ D + + + F +++G+ I + R+ K
Sbjct: 1 MPELPEVETIARALAPGLTGRAVTGLVVPDPKVLAGPRTKAAFAKNLVGRPITTVDRRAK 60
Query: 61 NLWLRL--------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
L +RL D+ +F MTG +I D + ++ V
Sbjct: 61 LLLVRLGPRPEVAGDAAAVLAFHLKMTGRFHIA-------------SADAPVPERARLLV 107
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP---ISELGPDALLEP--MTVDEFTDSLSKK 167
+L+DG L F+D RRF RL + P + + LGP EP MT + FT +LS++
Sbjct: 108 DLNDGQALVFSDLRRFGTARLFS-PEGLAAWDFYASLGP----EPWDMTPEAFTTALSRR 162
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
IKA+LLDQ+ I+GIGN ADE L+ A IHP A +S LL I+ V
Sbjct: 163 STRIKAVLLDQTVIAGIGNIYADESLHAAGIHPETRAGDISPSRAEKLLAAIQAV 217
>gi|167629831|ref|YP_001680330.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum
Ice1]
gi|238687886|sp|B0TER7.1|FPG_HELMI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|167592571|gb|ABZ84319.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum
Ice1]
Length = 277
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 17/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I K + K+ + + F ++ G+ I+ R+GK
Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEK-VELRLPKIAFALPGTLFTDALRGRRIIELGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD MTG + + R ++ E ++ FF LDDG L
Sbjct: 60 YLLLHLDGDETLVIHLRMTGRLI--------HLRPEEREEPEAAHTHAVFF--LDDGSLL 109
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F + L+ ++ P LGP+ L + + +F ++L K+K +K LLLDQ
Sbjct: 110 RYTDVRQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQ 169
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFY 233
S+++G+GN ADE L +A++HP +TA SL E L CI+ V + A G S + Y
Sbjct: 170 SFLAGLGNIYADEALARARLHPDRTADSLDDEESRRLYDCIRTVLQEGIDAKGTSFRDY 228
>gi|404423974|ref|ZP_11005589.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403652540|gb|EJZ07575.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 288
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 123/276 (44%), Gaps = 39/276 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++EH GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQEHVAGKSITAVRVHHPRAVRRHDAGPADLTARLLGARITGTGRRG 60
Query: 60 KNLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L + GM+G + + ++D ++ +
Sbjct: 61 KYLWLTLAEDDGQAETEALVVHLGMSGQMLL----------GPLRD-----DRHLRIAAL 105
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LDDG LSF D+R F +L D T+VP P++ + D L D + L K
Sbjct: 106 LDDGTALSFVDQRTFGGWQLAELVTVDGTAVPQPVAHVARDPLDPRFDRDHVVNVLRHKH 165
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG 227
IK LLDQ+ +SGIGN ADE L++ K++ TA L++ A LL EV +ALG
Sbjct: 166 SEIKRQLLDQTVVSGIGNIYADEALWRTKVNGASTAALLTRRKLAELLDAAAEVMTDALG 225
Query: 228 ----------VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 QGGTSFDSLYVNVNGESGYFERS-LDAYGREGEPCR 260
>gi|344300065|gb|EGW30405.1| hypothetical protein SPAPADRAFT_57196 [Spathaspora passalidarum
NRRL Y-27907]
Length = 384
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 67/291 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---------DGVSASDFEASVLGKA 51
MPE+ EV + + +G +I KS++A ++ +I S F+ ++ G +
Sbjct: 1 MPEVAEVAHVCAQLRRNILGHRI-KSVLASNDPLIFPFLKLSTDPDKELSTFQNALTGCS 59
Query: 52 ILSAHRKGKNLWLRLDSPPFPSF----QFGMTGAIYIKGVAV------------------ 89
+ S R GK W+RL S FGMTG + ++ +
Sbjct: 60 VSSIGRHGKYFWMRLQPRDKSSLVLLMHFGMTGMVKLRNINSHLIFMENGGDKKRLDKLK 119
Query: 90 -TQYKRSAVKDTDEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN--------DP 137
T+ + S + WP K++KF + +DG +E +F D RR A++RLL D
Sbjct: 120 QTEKEPSVADEEVTWPPKFTKFEMTFEDGDNQVEFAFVDPRRLARIRLLTGDSIQNDLDL 179
Query: 138 TSVPPISELGPD-------------ALLEP---------MTVDEFTDSLSKKKITIKALL 175
+ PP+ LGPD + +P +T+ EF + KK IK+LL
Sbjct: 180 LNHPPLDVLGPDYSKPRELLKQEQFTMGDPDPDNHGRPRLTLAEFNKLILTKKKPIKSLL 239
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
LDQ+ +G+GNWVADE+L+ A+IHP + +S ++ T+ I+ + E L
Sbjct: 240 LDQNCFAGVGNWVADEILFNARIHPAE-VISNKIDNVTTIHPVIERLYENL 289
>gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
avium ATCC 25291]
gi|166215633|sp|A0QJ66.1|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
Length = 283
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 124/272 (45%), Gaps = 36/272 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + V ++ R SA+ LDDG
Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAVPRAEHVRISAL----------------LDDG 104
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 TVLSFADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIK 164
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG---- 227
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V R+AL
Sbjct: 165 RQLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGT 224
Query: 228 ------VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 225 SFDSLYVNVNGESGYFDRS-LDAYGREGESCR 255
>gi|429205419|ref|ZP_19196696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus saerimneri 30a]
gi|428146491|gb|EKW98730.1| formamidopyrimidine-DNA glycosylase [Lactobacillus saerimneri 30a]
Length = 275
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ VK + K+I+ ++F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLIKLVQGR-TVKKVTVLYPKMIES-DLTEFVTQLTGKKILTVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR M G + V+ + K++ +LDDG +L
Sbjct: 59 YLLLRFSGDLTVVSHLRMEGKYF-------------VQPQTQPLEKHTHVVFDLDDGQQL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL+ + + +LGP+ TVD F +L ++K IK LLDQ
Sbjct: 106 RYNDSRKFGRMRLVQTGQENDLKSLQKLGPEPFAPEFTVDYFAQALHRRKKAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
+ ++G+GN DEVL+ KIHP A +++ L + I E++ A+ G +++ Y
Sbjct: 166 TIVTGLGNIYVDEVLWMTKIHPETPANHVTRSEITALRQNIIAELQRAITAGGTTIRSYT 225
Query: 235 CYF 237
F
Sbjct: 226 DAF 228
>gi|384497129|gb|EIE87620.1| hypothetical protein RO3G_12331 [Rhizopus delemar RA 99-880]
Length = 560
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 102 EWPSKYSKFFVELDDG-----LELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPM 155
EWP ++ K + +D + F D RR +K+RL++ DP V PIS+LG D +L
Sbjct: 13 EWPPRFWKLLITFEDPATGKIVNFGFKDPRRLSKLRLIDGDPMKVEPISKLGFDPVLNMP 72
Query: 156 TVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+ +EF+ + K+ + K LLLDQS+ +G+GNWVADE+L+QAKIHP Q + +L+KE +L
Sbjct: 73 SFEEFSGLVCKRAVPTKTLLLDQSFSAGVGNWVADEILFQAKIHPAQLSNTLTKEELLSL 132
Query: 216 LKCIKEVREALGVSLQFYKCYFAKPYVHKKHRENK 250
K V E V+++ + F + ++ K+R NK
Sbjct: 133 YDKTKYVCET-AVAVEADESKFPEDWLM-KYRWNK 165
>gi|433608890|ref|YP_007041259.1| Formamidopyrimidine-DNA glycosylase [Saccharothrix espanaensis DSM
44229]
gi|407886743|emb|CCH34386.1| Formamidopyrimidine-DNA glycosylase [Saccharothrix espanaensis DSM
44229]
Length = 286
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + + + A+DF + + G+ ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVAGRTVAAVEVLHARAIRRHLPGAADFASRLAGRTMVGARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW+ L GM+G + ++ + K V+ +F D+G E
Sbjct: 61 KYLWVDLSDGDALLAHLGMSGQMLVQPLDAPDEKHLRVR---------VRF---ADEGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T +P P++ + D + D +L +++ +K
Sbjct: 109 LRFVDQRTFGGLALAEIVEVDGTPLPVPVAHIARDPMDPVFDPDAAVTALRRRRTEVKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG 227
LLDQ+ +SG+GN ADE L++ ++H L+ L++ A LL +V REALG
Sbjct: 169 LLDQTLVSGVGNIYADEALWRTRLHGLRPTEKLTRAKAAELLGHATDVMREALG 222
>gi|302391164|ref|YP_003826984.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM
5501]
gi|302203241|gb|ADL11919.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM
5501]
Length = 275
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ + E + K+I + + K+I + +F ++ G I R+GK
Sbjct: 1 MPELPEVQTVVDTLTESVLKKEIT-DVEVKNEKLIANLEVEEFIDTLTGSRIEDIRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + LD+ + MTG R E KY F + EL
Sbjct: 60 YIIMELDTDYYLVTHLRMTG-------------RFVYCQKKEEVDKYDYIFFKFKGNDEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
KR+F + L+ D +++LGP+ L + T+D+F + LS ++ IK LLL+Q +
Sbjct: 107 RLGSKRKFTRTYLVADLKEAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPLLLNQKF 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ ++IHPL+TA +L+ + L + I++V
Sbjct: 167 LAGLGNIYVDEALFISQIHPLRTADTLTDQEIKKLYQAIQQV 208
>gi|306490859|gb|ADM94978.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 22/229 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K+I K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKKVINKRINK-IKVNLPRLIKKPTIDEFSRRLKGTYITKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-------SKYSKFFVE 113
+ L S F GM+G + + +T+E P K+ F
Sbjct: 60 YILCFLSSGECLVFHLGMSGCL--------------LYETNELPISIIDINKKHFHVFFF 105
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+D ++ + D R+F K+ LL + + LG + L E T+D+FT + KK IK+
Sbjct: 106 FEDNTKMIYNDVRQFGKIWLLKKDDKLTEVESLGLEPLEEDFTIDKFTRIIENKKGNIKS 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+++Q +I+GIGN A+E+L++A IHPL+ + SL+ L IK+
Sbjct: 166 LIMNQKHIAGIGNIYANEILFRAGIHPLRRSNSLTTHEIKKLYCSIKDT 214
>gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
Length = 269
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ ++ ++ VSA S+ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNE-RLRWPVSAEIH--SLSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + D D P K+ + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRI------------LPD-DLPPEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF P ++ LGP+ L + VD + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKTLEGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSADECERLVRAIKTV 205
>gi|260892909|ref|YP_003239006.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4]
gi|260865050|gb|ACX52156.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4]
Length = 269
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E IG +I + + + + + D + GK I R+GK
Sbjct: 1 MPELPEVETIRRQLAEKVIGARIKRVEVRRAAVMTNPIPGLDL---LSGKTITGVSRRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL L+ F GMTG + ++ E P ++ +ELD G L
Sbjct: 58 WLWLSLEGDLALLFHLGMTGQL-------------VWEEEGELPP-HTHLLIELDRG-RL 102
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF +VRL + E LGP+ L +V ++L++ + IKALLL+Q
Sbjct: 103 RFTDFRRFGRVRLGKSEEIRDYLEEKLGPEPLSPAFSVSYLKNALARSRRPIKALLLEQK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ A I P + A +L+++ L + IK V
Sbjct: 163 AVAGLGNIYTDEALFLAGIDPRRPACTLTEDEVKRLHEAIKGV 205
>gi|409358246|ref|ZP_11236609.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Dietzia alimentaria 72]
Length = 307
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H + + IV S+ A + EA + G+ + AHR+G
Sbjct: 1 MPELPEVEVVRRGLADHVVARTIVAASVTGARTARRQPGGAPEIEARLTGRTVSGAHRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL LD GM+G + V E ++ EL
Sbjct: 61 KYLWLTLDHEDTAGGDCLLVHLGMSGQML-------------VTTAGEPTVRHLHARAEL 107
Query: 115 DDGLELSFTDKRRFAKVRLLN-----DPTSV---PPISELGPDALLEPMTVDEFTDSLSK 166
DDG EL F D+R F ++ D T V P + + D E ++ +
Sbjct: 108 DDGTELRFVDQRTFGGWTVVPLTEALDGTGVLLPAPAAHIAADPFEAGFDAAEVARTIRR 167
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K IK LLLDQ+ +SGIGN ADE L+++ IH + + +L+ + LL+ ++V
Sbjct: 168 KNTEIKRLLLDQTVVSGIGNIYADEALWRSGIHGRRRSGALTVRAVTDLLEHARDV 223
>gi|354559459|ref|ZP_08978708.1| Formamidopyrimidine-DNA glycosylase [Desulfitobacterium
metallireducens DSM 15288]
gi|353542355|gb|EHC11818.1| Formamidopyrimidine-DNA glycosylase [Desulfitobacterium
metallireducens DSM 15288]
Length = 273
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H + ++ ++ ++ + G FE V G+ ILS R+GK
Sbjct: 1 MPELPEVETIRRTLCQHIL-QQTIEDVLIRWPGAVKGWDIFPFEQGVKGRRILSVDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD MTG + G +++ P K++ +L +G EL
Sbjct: 60 YLLFHLDEDWSLLAHMRMTGRLNFYG---------ELRE----PEKHTHVVFKLSNG-EL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F ++ L+ + + P I LGP+ L E T + L K+ + +K LLDQ
Sbjct: 106 HFTDTRKFGRIMLVPTQECSQHPSICILGPEPLEEDFTPQVLGERLKKRSVALKIALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN DE L++AK+ P + A SLS++ L I+ V + A G S + Y+
Sbjct: 166 KVVAGLGNIYVDESLFRAKLSPERAANSLSRKELKALHAAIRIVLQAGIDAQGTSFRDYR 225
>gi|417931306|ref|ZP_12574674.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
SK182B-JCVI]
gi|340776045|gb|EGR98095.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
SK182B-JCVI]
Length = 280
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI----DGVSASDFEASVLGKAILSAH 56
MPELPEVE R +E I +V+S+ D + + + A+ FE + G+ + +
Sbjct: 1 MPELPEVETVRAGLENLVI-PAVVESVDVVDARGLRPSGEPEDAAFFETVLTGRQLTAVS 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW LD GM+G + Q++ +++ + LD+
Sbjct: 60 RRGKYLWFVLDDDTALLAHLGMSGHFRVVDRRAPQHR-------------HTRIVIALDE 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P++ + PD E DE L ++ TIK L
Sbjct: 107 GRDLRFLDQRTFGGLTLTPLLDGIPGPVTHIAPDPFEECFDADEVARRLCARRSTIKRSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LDQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V
Sbjct: 167 LDQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDV 213
>gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
Length = 263
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV ++ + + KKIV+ I D K+ A DFE + A S R GK
Sbjct: 1 MPELPEVAYQKKYADATILHKKIVE-IETGDKKIYQSAKA-DFEKILTDNAFESTSRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+L+L FGMTG + Y+ D+ P KY++ + +D +L
Sbjct: 59 YLFLKLKKNGVLVMHFGMTGKL-------DYYQH------DDTP-KYTQLKLIFEDHSKL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+FT R+FAK+ L LG DAL +T EF + TIK LL++QS
Sbjct: 105 AFTCPRKFAKLYLAKSVEEFQQSHNLGADAL--AITEKEFLKICDGRSGTIKGLLMNQSL 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+GIGN ADEVL+Q KIHP +LS++ ++ I+EV
Sbjct: 163 IAGIGNMYADEVLFQTKIHPKTKVNTLSQKQLKSIFDKIEEV 204
>gi|333397058|ref|ZP_08478871.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum KCTC 3527]
gi|406600445|ref|YP_006745791.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum JB7]
gi|406371980|gb|AFS40905.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum JB7]
Length = 275
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI-------VKSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ +G +I K I D I GV+ + F A
Sbjct: 1 MPELPEVETVRRGLEKLIVGGQIRQVHLLYPKLINGDSQAFITGVTNASFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPIETRPYKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D ++ + D RRF ++ L N + VP +++LGP+ + + +D S+ K
Sbjct: 99 LLDQRQVFYNDTRRFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVAIFSRSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL--- 226
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP +L+ + L + I E++ A+
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTKTLTVPELSLLRENIIAEMKRAIAHH 218
Query: 227 GVSLQFYKCYFAK 239
G ++ + F +
Sbjct: 219 GTTVHSFSNVFGE 231
>gi|395242567|ref|ZP_10419564.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pasteurii CRBIP
24.76]
gi|394480299|emb|CCI85804.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pasteurii CRBIP
24.76]
Length = 276
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 119/245 (48%), Gaps = 33/245 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK------SIIADDNKVIDGVSASDFEASVLGKAILS 54
MPE+PEVE RR + +GK I K +II+ D++ +F+ ++GK IL+
Sbjct: 1 MPEMPEVETVRRTLTPLAVGKVIKKVDLWYPNIISSDHR--------EFKNKLVGKKILA 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R K L +RL M G Y+ A + K V+ E
Sbjct: 53 IDRYAKFLLIRLSEDLTIVSHLRMEGKYYLSLPATPKDKHDHVQ-------------FEF 99
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
DG L + D R+F +++L+ + V I++LGP+A T+D F L+K+ IK
Sbjct: 100 TDGTSLRYNDVRKFGRMQLVETGSEKIVTGIAKLGPEADSPEFTLDYFYAGLNKRHKNIK 159
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL---GV 228
+LLDQS +SG+GN DEVL+ +KIHPL + K+ A L I + EA+ G
Sbjct: 160 NVLLDQSLVSGLGNIYVDEVLWSSKIHPLSICNKIPKDKVAILRDEINHTIEEAIKYKGT 219
Query: 229 SLQFY 233
++ Y
Sbjct: 220 TVHTY 224
>gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
Length = 281
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 33/236 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ +G+ IV + D KV+ G +DF A +G+ I S R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVIV-GVDVPDAKVLAGPKRRADFAAMAVGRTIQSVGRRA 59
Query: 60 KNLWLRL--------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K L L L D P +F MTG +I D D ++
Sbjct: 60 KLLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIA--------PPGAPDPDR-----ARLL 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPI---SELGPDALLEP--MTVDEFTDSLSK 166
V L DG L F D RRF R+L P ++ + LGP EP MT F ++L +
Sbjct: 107 VRLSDGNTLVFADLRRFGTARVLT-PEALSAWDFHASLGP----EPWDMTPQAFEEALGR 161
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K IKA LLDQ+ I+GIGN ADE L+ A+I P A L+ LLK ++ V
Sbjct: 162 KSTRIKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQRQRLLKAVQNV 217
>gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc fallax KCTC 3537]
Length = 275
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 114/229 (49%), Gaps = 32/229 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE R +E+ +G +I K I+ D I G AS F A
Sbjct: 1 MPELPEVETVRSGLEKLIVGGEIANIRVPYPKVIMGDAPAFIQGTLASQFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L+LRL S Q + + ++G QY +V+ D K+++ E
Sbjct: 53 -IDRRGKYLFLRL------SNQRTIVSHLRMEG----QY---SVEPLDAPLHKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L DG L + D RRF ++ L + +VP +++LGP+ + + ++ +K K
Sbjct: 99 LADGRALFYNDTRRFGRMTLAETGLEQIAVPTLAKLGPEPITTDLHLEYMIQIFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP A L A L I
Sbjct: 159 VKSFLLDQTKIAGIGNIYADEVLWQSKIHPETPANELDPSQLAILRDSI 207
>gi|417999445|ref|ZP_12639654.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei T71499]
gi|410539076|gb|EKQ13614.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei T71499]
Length = 282
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
gi|189044668|sp|A5D0T6.1|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
Length = 276
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 26/229 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR ++ G KI V+ ++ KVI S+F+ ++ K IL R+
Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLP---KVIRSPELSEFKETIADKKILKVGRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L + L + MTG +Y G + P++++ L +G
Sbjct: 58 GKYLLINLSEGYTLAVHLRMTGRLVYCAG--------------QDPPARHTHVIFNLSNG 103
Query: 118 LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D R+F ++ L+ PT + I ELG + L E T + L ++ IK
Sbjct: 104 CQLHFADMRQFGRIWLV--PTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKP 161
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLLDQ++I+G+GN ADE L++A+I+P + A +L+ A L + I+++
Sbjct: 162 LLLDQTFIAGLGNIYADEALHRARINPERLATTLTPREIARLYRAIRDL 210
>gi|404444993|ref|ZP_11010141.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium vaccae ATCC 25954]
gi|403652897|gb|EJZ07913.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium vaccae ATCC 25954]
Length = 282
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H G++I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAQHVTGRRIAAVRVHHPRAVRRHEAGPADLTARLLDTTITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLLGQVPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D ++VP P++ + D L D L K IK L
Sbjct: 106 LSFVDQRTFGGWMITDLVDVDGSAVPVPVAHIARDPLDPRFDRDAVVKVLRGKHSEIKRL 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----------- 223
LLDQ+ +SGIGN ADE L++AKI+ + A +S+ A LL V
Sbjct: 166 LLDQTVVSGIGNIYADESLWRAKINGARPASGVSRAKLAELLDAASAVMTDALAQGGTSF 225
Query: 224 EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
++L V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>gi|403721060|ref|ZP_10944285.1| formamidopyrimidine-DNA glycosylase [Gordonia rhizosphera NBRC
16068]
gi|403207400|dbj|GAB88616.1| formamidopyrimidine-DNA glycosylase [Gordonia rhizosphera NBRC
16068]
Length = 329
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 41/280 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ IV + V + A+D +LG+ + HR+G
Sbjct: 1 MPELPEVETVRRGLAAHVEGRHIVAVEVLHPRSVRRQLGGAADLTGRLLGRPVAGVHRRG 60
Query: 60 KNLWLRL--DSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL + D+ FP GM+G + I + D D + + LDD
Sbjct: 61 KYLWLDIGADTDTFPLVVHLGMSGQMLI----------TRAGDPDH---VHLRIRATLDD 107
Query: 117 GLELSFTDKRRF-----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSL 164
G EL F D+R F A R + + +P I+ + PD V ++
Sbjct: 108 GNELRFVDQRTFGGWHVDEYAEPAASRTPDTTSRLPDSIAHIAPDPFDPAFDVGAVIAAM 167
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR- 223
+ + IK +LLDQ+ ISG+GN ADE L++++IH + A LS+ L+ + V
Sbjct: 168 AARHSEIKRVLLDQTVISGVGNIYADEALWRSRIHGGRGADRLSRAKLTELVAAVTAVMG 227
Query: 224 ----------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + ++ RE + CR
Sbjct: 228 EALAVGGTSFDALYVNVNGQSGYFER-SLNAYGREGEPCR 266
>gi|57233872|ref|YP_182098.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes
195]
gi|57224320|gb|AAW39377.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes
195]
Length = 270
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 18/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI + + ++F V G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRMEALWAKTLCP--PETEFNKLVSGLQVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVELDDGLE 119
+ + L F S M+G + +AVK +T+++P ++++ L++G +
Sbjct: 59 YIIISLSGGLFISVHLKMSGGL------------TAVKAETEQFP-RFTRAVFHLENGEQ 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ FTD R+F ++ LL ++ + +LGP+ L T + LS +K IKA+LLDQ
Sbjct: 106 VYFTDIRKFGRINLLTSLDTI--LEKLGPEPLEGDFTPEVLGKRLSGRKGPIKAVLLDQK 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN ADE L++A ++PL+ A SLSK L I+ V
Sbjct: 164 VLAGVGNMYADEALFKACLNPLRPADSLSKAEVTKLHSAIQSV 206
>gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
gi|166198746|sp|A4FMJ7.1|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
Length = 295
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 29/240 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G+ + + + V V DF + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60
Query: 60 KNLWLRLDSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFF 111
K +WL L P GM+G + ++ DE P + + +
Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQ--------------PDEAPDETHLRVR 106
Query: 112 VELDDG-LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
DDG +L F D+R F + L D +VP P++ + PD L ++ +
Sbjct: 107 FRFDDGGPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMR 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
K++ +K LLDQ+ +SGIGN ADE L++AK+H + +L++ TLL EV +A
Sbjct: 167 KRRTGVKRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQARTLLVAAVEVMQA 226
>gi|357633255|ref|ZP_09131133.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B]
gi|357581809|gb|EHJ47142.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B]
Length = 289
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 113/244 (46%), Gaps = 41/244 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE RA+ +G+ +V I A D KV+ A ++A R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVVV-GIEAPDRKVLAAPKTRAAWARAAAGRTVTAVSRRA 59
Query: 60 KNLWLRLDSPPFP----------------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEW 103
K L + L P P +F MTG +I TD
Sbjct: 60 KLLLVHLGPAPAPGSLPGAPDLDEDTLLFAFHLKMTGRFHIA-------------PTDAP 106
Query: 104 PSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEP--MTVD 158
P Y++ V LDDG L F+D RRF RLL P ++ P + LGP EP MT +
Sbjct: 107 PPAYARLLVRLDDGQSLVFSDMRRFGTARLLT-PQALSDWPFYATLGP----EPWDMTPE 161
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
F +LS++ IKA+LLDQ+ ++GIGN ADE L+ A I P A SLS LL
Sbjct: 162 AFEAALSRRTTRIKAVLLDQTVMAGIGNIYADESLFAAGIRPDTPAKSLSAGQRQKLLAA 221
Query: 219 IKEV 222
++ V
Sbjct: 222 VQAV 225
>gi|150865500|ref|XP_001384741.2| hypothetical protein PICST_84240 [Scheffersomyces stipitis CBS
6054]
gi|149386756|gb|ABN66712.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 361
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 71/269 (26%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASD-----FEASVLGKAI 52
MPE+ EV + + +G +I ++ +D V+ S + + +L I
Sbjct: 1 MPEVAEVAHVCAQLRRNVLGYQIASLVLNNDALLFPVLKNASNPEKELQSLQGRLLHSTI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS-------FQFGMTGAIYIKGVA----------------- 88
S R GK WLR + P S FGMTG I I+ +
Sbjct: 61 ESVGRHGKYFWLR--TRPVDSKSTDVLLMHFGMTGNIKIRNIGSHLIFLENAGTKEDVVT 118
Query: 89 ---VTQYKRSAVKDTDEWPSKYSKFFVELD-DG--LELSFTDKRRFAKVRLLNDPT---- 138
+ + + K+ +EWP +++K + L+ DG L+L+FTD RR ++RLL P
Sbjct: 119 VEQLQNEENESKKEPEEWPPRFTKMELVLEKDGTRLDLAFTDPRRLGRIRLLTGPGIQAD 178
Query: 139 ----SVPPISELGPDALLEPM-----------------------TVDEFTDSLSKKKITI 171
+ P+ LGPD P TV+EF+ + KK I
Sbjct: 179 EDLLNTSPLDALGPDYSKSPNSLKSEKEFVIGDPDPHHHGRPRPTVEEFSKLVLSKKKPI 238
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHP 200
K+ LLDQ++ SGIGNWV DEV+YQA+IHP
Sbjct: 239 KSFLLDQAFFSGIGNWVGDEVVYQARIHP 267
>gi|379012971|ref|YP_005270783.1| formamidopyrimidine-DNA glycosylase Fpg [Acetobacterium woodii DSM
1030]
gi|375303760|gb|AFA49894.1| formamidopyrimidine-DNA glycosylase Fpg [Acetobacterium woodii DSM
1030]
Length = 270
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 51/297 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ IGK+I K + DN + +A F S+ G+ I R GK
Sbjct: 1 MPELPEVETVRRTLKNFIIGKEITKITVHYDNIITGDTNA--FVTSLTGQTIRDIDRVGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L LD+ F S M G I VA ++ P +K+ DG E
Sbjct: 59 YLIFILDTQAFIS-HLRMEGKYNI--VAASK------------PLNKHEHLSFLFSDGSE 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVD--EFTDSLSKKKITIKALL 175
L + D R+F ++ L+N T P+ +LGP EP D + K + IK LL
Sbjct: 104 LRYQDTRKFGRLELVNKETYRHDLPLCKLGP----EPWDADPQAIYRKIHKSNLPIKTLL 159
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQ 231
LDQS ++GIGN A+E+ ++ KIHP LSK+ A L+ E+ +A+ G ++
Sbjct: 160 LDQSLMAGIGNIYANEICFRMKIHPATPGKRLSKKRVAELIDVSTEILTQAITQGGTTIH 219
Query: 232 FYKCYFAKPYVHKKHRENKICRLFKVRLKLMLTAAAFLLNGYFIFDGAKSLEKLMVR 288
+ N I LF+V+L++ L + NG ++ K MVR
Sbjct: 220 SFDA-------------NGITGLFQVQLQVHLQKNCSVCNG--------AITKEMVR 255
>gi|377561843|ref|ZP_09791273.1| formamidopyrimidine-DNA glycosylase [Gordonia otitidis NBRC 100426]
gi|377521038|dbj|GAB36438.1| formamidopyrimidine-DNA glycosylase [Gordonia otitidis NBRC 100426]
Length = 293
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRSGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLVGRLSGATILAARRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P GM+G + + V + V+ T L
Sbjct: 61 KYLWLDVAAPQGDDRFALVVHLGMSGQMLVARVGAPDHTHLRVRAT-------------L 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGEELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
+ K +K LLDQS +SG+GN ADE L++A+++ + +SK A LL EV
Sbjct: 168 MRGKHTEVKRALLDQSLVSGVGNIYADEALWRARLNGTRVTDGISKAKLAELLDAATEVM 227
Query: 224 -----------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + ++ R + CR
Sbjct: 228 SDALAAGGTSFDALYVNVNGQSGYFERS-LNAYGRAGQPCR 267
>gi|333978062|ref|YP_004516007.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821543|gb|AEG14206.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 274
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R ++E G I I K+I S +F V+ K IL R+GK
Sbjct: 1 MPELPEVETVKRTLKERLPGLTICGVDIYLP-KIIQTPSPEEFCRQVVDKKILDVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L MTG + TDE SK++ L++G +L
Sbjct: 60 YLLISLSQGLMLVVHLRMTGQL-------------VYTVTDEPRSKHTHLVFHLNNGHQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F + L+ D +V + +LG + L T++ L ++ +K LLLDQ
Sbjct: 107 RFTDMRQFGRFWLVPERDLQAVSGLKDLGVEPLSREFTIEFLEKELKARRTRLKTLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
++ISG+GN DE L++A +HP + A +L+ L + I+ V E
Sbjct: 167 TFISGLGNIYVDEALHRAGLHPSRPANTLTPGEVEALFQAIRAVLE 212
>gi|271969196|ref|YP_003343392.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM
43021]
gi|270512371|gb|ACZ90649.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM
43021]
Length = 288
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + + + V A +F + + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRVIAHAEVLHPRAIRRHVPGAEEFSSRLKGRTIGSAERRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + G A ++ R + TD P
Sbjct: 61 KYLWLPLDGSDAILAHLGMSGQLLVVEPGSAPERHLRVRIGFTDGGP------------- 107
Query: 118 LELSFTDKRRFAKVRLL----NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+L F D+R F V + + VP PI+ + D E D F L ++ +K
Sbjct: 108 -DLRFVDQRTFGHVLVTAMAHSGGRPVPEPITHIAADPFEEHFDEDLFGRRLRARQTEVK 166
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQS ISG+GN ADE L++A++H + +L++ A LL +EV
Sbjct: 167 RALLDQSLISGVGNIYADEALWRARLHGARPTGALTRPKIAELLGAAREV 216
>gi|417989987|ref|ZP_12630481.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei A2-362]
gi|410536419|gb|EKQ11013.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei A2-362]
Length = 282
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVTGMGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|406837657|ref|ZP_11097251.1| formamidopyrimidine-DNA glycosylase [Lactobacillus vini DSM 20605]
Length = 276
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +G++I +I K+I G S ++F ++ K +LS R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVVGQRIT-AIDIRYPKIIIG-SPAEFCQALHNKKLLSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G + ++ +D+ K++ +L G +L
Sbjct: 59 FLLFNFDQ------NLTMVSHLRMEG-------KYFIRRSDQPIEKHTHIIFQLASGQQL 105
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L + ++P +S+LGP+ L + +FT L K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLAKTDQVQNLPNLSKLGPEPLSTDFKLTDFTRKLLHCKKAIKPALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ + G+GN DEVL+ ++IHPL + L+ + A L + I
Sbjct: 166 TIVVGLGNIYVDEVLWLSQIHPLTSCYELTAKQAADLFQNI 206
>gi|378981297|ref|YP_005229438.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419976061|ref|ZP_14491464.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981837|ref|ZP_14497108.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419987368|ref|ZP_14502489.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992938|ref|ZP_14507888.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419999163|ref|ZP_14513942.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004934|ref|ZP_14519565.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010527|ref|ZP_14524999.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016685|ref|ZP_14530974.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420022169|ref|ZP_14536341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027830|ref|ZP_14541818.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033468|ref|ZP_14547272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039270|ref|ZP_14552907.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420045100|ref|ZP_14558572.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420051030|ref|ZP_14564322.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056662|ref|ZP_14569815.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062576|ref|ZP_14575544.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067993|ref|ZP_14580779.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073462|ref|ZP_14586088.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079208|ref|ZP_14591657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420082641|ref|ZP_14594935.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421910260|ref|ZP_16340049.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916184|ref|ZP_16345769.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428147721|ref|ZP_18995633.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428938093|ref|ZP_19011225.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae VA360]
gi|364520708|gb|AEW63836.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397341556|gb|EJJ34733.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397342157|gb|EJJ35323.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397344908|gb|EJJ38037.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397358754|gb|EJJ51467.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397359810|gb|EJJ52499.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397364008|gb|EJJ56643.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374654|gb|EJJ66979.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397378579|gb|EJJ70789.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385422|gb|EJJ77523.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397392743|gb|EJJ84525.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397394836|gb|EJJ86555.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403389|gb|EJJ94961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397409962|gb|EJK01258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397410333|gb|EJK01616.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420310|gb|EJK11391.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427081|gb|EJK17867.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397427664|gb|EJK18428.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397437943|gb|EJK28479.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444009|gb|EJK34303.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451958|gb|EJK42034.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|410115858|emb|CCM82674.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121548|emb|CCM88394.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|426306283|gb|EKV68388.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae VA360]
gi|427542362|emb|CCM91771.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 269
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L S + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLEL-SDGWIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|160914227|ref|ZP_02076448.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991]
gi|158433854|gb|EDP12143.1| DNA-formamidopyrimidine glycosylase [Eubacterium dolichum DSM 3991]
Length = 275
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E +I+ + DN I + F ++ K I HR GK
Sbjct: 1 MPELPEVETVVRTLEHQLQQIEIMDCRVLWDN--IIAMDTQAFIETIRHKKIQGYHRHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S F M G Y++ E K++ L DG EL
Sbjct: 59 YLMFDLGSYDF-IVHLRMEGKFYVQA-------------PQEPYDKHTHVIFSLSDGREL 104
Query: 121 SFTDKRRFAKVRL---LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L L + P + +GPDA E + D L KKK +KA+LLD
Sbjct: 105 RYHDTRKFGKMVLYPKLENYQEYPCFAHIGPDAFDEELCADSLYRMLHKKKTYLKAVLLD 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
QS ++GIGN ADE+ Y ++HP L K+ A L I E R L +++
Sbjct: 165 QSVMAGIGNIYADEICYAMRMHPETKISHLRKKDFAVL---ITETRRILSGAIR 215
>gi|134299455|ref|YP_001112951.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens
MI-1]
gi|172044279|sp|A4J4X3.1|FPG_DESRM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|134052155|gb|ABO50126.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Desulfotomaculum reducens MI-1]
Length = 277
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R++E+H G ++ S+ +VI F ++G+ R+G
Sbjct: 1 MPELPEVETIVRSLEKHLSGL-VITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L + G+T I+++ Y D D K++ LD+G +
Sbjct: 60 KYLLLHMSD--------GLTLVIHLRMTGRLIYC-----DADLPLEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L+ + +P I E+GP+ L + + L +++ IK+LLLD
Sbjct: 107 LRFADVRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +++G+GN ADE L++AKIHP + A L+ + L K I EV
Sbjct: 167 QCFVAGLGNIYADEALHEAKIHPERLAPDLTSREASGLHKAIIEV 211
>gi|348169251|ref|ZP_08876145.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Saccharopolyspora spinosa NRRL 18395]
Length = 372
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 27/252 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
+PELPEVE RR + EH +G+ + + V V DF + G+ + +A R+G
Sbjct: 7 VPELPEVEVVRRGVAEHAVGRTLSSVEVLHPRAVRRHVPGPDDFAGRLAGRCLSAARRRG 66
Query: 60 KNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K LWL L D P GM+G + ++ + K V+ +F
Sbjct: 67 KYLWLELGDEAGSPDSGGEALVVHLGMSGQLLVQPGDAREEKHLRVR---------LRF- 116
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
D G EL F D+R F + L + D ++P P++ + PD L + VD L
Sbjct: 117 --ADGGPELRFVDQRTFGGLHLADLVEVDGIALPKPVAHIAPDPLEQVFAVDAVAARLRS 174
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
++ IK LLDQS +SG+GN ADE L++A++H + +L++ L + +V +EA
Sbjct: 175 RRTGIKRALLDQSLVSGVGNIYADEALWRAQLHWARPTATLTRPKIRELFDAVTDVMQEA 234
Query: 226 LGVSLQFYKCYF 237
L V + +
Sbjct: 235 LQVGGTSFDALY 246
>gi|421728003|ref|ZP_16167160.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca M5al]
gi|410371185|gb|EKP25909.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca M5al]
Length = 269
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHPALAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|258544390|ref|ZP_05704624.1| adenylate kinase [Cardiobacterium hominis ATCC 15826]
gi|258520349|gb|EEV89208.1| adenylate kinase [Cardiobacterium hominis ATCC 15826]
Length = 272
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H +I SI A K+ + ++ + G + R+GK
Sbjct: 1 MPELPEVETTRRGIAPHLENHRI-HSISAHIAKLRQPLDTAELN-RISGHTLTRIERRGK 58
Query: 61 NLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
+L L D P GM+GA+ I A + +K K+ + LD+G E
Sbjct: 59 HLILHSDQPELALHIHLGMSGALRIT-PASSPHK------------KHDHVAITLDNGDE 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L D RRF V L+ DPT P ++ LG + L + KK IK +++Q
Sbjct: 106 LRLHDPRRFGHVALI-DPTRPPASLANLGDEPLDDNFNGARLYAQTRGKKSAIKTHIMNQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
Y++G+GN A E L+ + IHP + A +L++ C L + IK V +A
Sbjct: 165 RYLTGVGNIYATEALFASAIHPARAATTLTRADCDRLAEAIKTVLQA 211
>gi|418008307|ref|ZP_12648174.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW4]
gi|410546985|gb|EKQ21228.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW4]
Length = 282
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPSTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVAGVGNIYADEVLWLSQLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827]
gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827]
Length = 291
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + + + A+DF + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW+ L GM+G + ++ V K V+ V DDG E
Sbjct: 61 KYLWVDLSGGEAVLAHLGMSGQMLVQPVGAPDEKHLRVR------------VVFEDDGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T +P +S + D + D +L +K +K
Sbjct: 109 LRFVDQRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-EALG 227
LLDQ+ +SG+GN ADE L++A++H L+ L+ A LL +V EALG
Sbjct: 169 LLDQTLVSGVGNIYADESLWRARLHGLRPTAKLTTAKTAELLGHATQVMLEALG 222
>gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS]
gi|166215636|sp|A3PXU1.1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Mycobacterium sp. JLS]
Length = 296
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 122/281 (43%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----LDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
R+ALG V++ YF + + RE + CR
Sbjct: 226 RDALGQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>gi|68478421|ref|XP_716712.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|68478540|ref|XP_716652.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|46438325|gb|EAK97657.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|46438390|gb|EAK97721.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
Length = 322
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 47 VLGKAIL-SAHRKGKNLWLRLDSPPFPS---FQFGMTGAIYIKGV--------------A 88
VL A++ S R GK W+RL++ + FGMTG I ++ V A
Sbjct: 4 VLTNAVVTSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMIKLRNVHSHLAFMENGGDKKA 63
Query: 89 VTQYKRSAVKDT---------DEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN- 135
+ + +R KD+ EWP +++KF +EL++ LE +F+D RR A+VRLL+
Sbjct: 64 LEKLERFRYKDSRIKPDVEVKQEWPPRFTKFNMELENNDKKLEFAFSDPRRLARVRLLSG 123
Query: 136 -----DPT--SVPPISELGPD--------ALLEP---------------MTVDEFTDSLS 165
D + + P++ LGPD EP +++DEF+ +
Sbjct: 124 LEVSTDESLLKLSPLNALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALIL 183
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
KK IK+LLLDQ+Y +G+GNWVADEVL+QA IHP + S + + IK++ ++
Sbjct: 184 SKKKPIKSLLLDQTYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDS 243
Query: 226 L 226
L
Sbjct: 244 L 244
>gi|302865862|ref|YP_003834499.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC
27029]
gi|315502407|ref|YP_004081294.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5]
gi|302568721|gb|ADL44923.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC
27029]
gi|315409026|gb|ADU07143.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5]
Length = 285
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE R + + IG++I + V A VL G+ + R+G
Sbjct: 1 MPELPEVETVRVGLAQWVIGRRIAAVEVRHPRAVRRHAPGGAHFADVLAGRTVTGVQRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ V V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPVGAADELHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D + + + F +L +K+ IK LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGAELPAEIAHIARDPMDPEFSDEAFVAALRRKRTEIKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+ ISG+GN ADE L++AK+H + A +L++ + L+ + VR+ L +++ F
Sbjct: 169 TLISGVGNIYADEALWRAKLHGTRPADALTRPAA---LRLLGHVRDVLAEAIKQGGTSFD 225
Query: 239 KPYVH 243
+ YV+
Sbjct: 226 ELYVN 230
>gi|366089357|ref|ZP_09455830.1| formamidopyrimidine-DNA glycosylase [Lactobacillus acidipiscis KCTC
13900]
Length = 290
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E K+I I K+I G +F + GK R+GK
Sbjct: 12 MPELPEVETVRRELSELVTDKQIT-GIELLYPKIIQG-DPQEFIKELTGKKFEKIDRRGK 69
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + +VK ++ K++ +LDDG +L
Sbjct: 70 YLLFRF------SGELTMVSHLRMEG-------KYSVKSSEMPLDKHTHVVFDLDDGTQL 116
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T + + +LGP+ E VDEF L KKK IK LLDQ
Sbjct: 117 RYNDVRKFGRMHLVKTGTEDDLAALKKLGPEPTPETFLVDEFYQELQKKKKVIKTALLDQ 176
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+ ++G+GN DEVL+ KIHP ++ E L
Sbjct: 177 TIVAGLGNIYVDEVLWMTKIHPETKCFEITHEQTQKL 213
>gi|336179507|ref|YP_004584882.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca
glomerata]
gi|334860487|gb|AEH10961.1| Formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca
glomerata]
Length = 284
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 14/224 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR +E G+ I +A V + + A+VL G+ I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERTLPGRTIATVAVAHPRAVRRHAAGAADFAAVLTGRTIEAACRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + + A + DE + F D G E
Sbjct: 61 KYLWLALDSGAALLGHLGMSGQLLV----------VATEKPDE--THLRVRFTFSDAGRE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + ++ VP PI+ + D L + F ++ +++ IK LLDQ
Sbjct: 109 LRFVDQRTFGGLAVVPADAGVPAPIAHIARDPLDPGFSDAGFVAAVRRRRTGIKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +SGIGN ADE L++A +H + +L++ LL+ ++EV
Sbjct: 169 TLVSGIGNIYADESLWRAGLHYARPTGTLTRGELNRLLQSVREV 212
>gi|402841621|ref|ZP_10890066.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. OBRC7]
gi|423105459|ref|ZP_17093161.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5242]
gi|376380776|gb|EHS93519.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5242]
gi|402282555|gb|EJU31094.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. OBRC7]
Length = 269
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + VD +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNVDYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECGQLVKVIKLV 205
>gi|257869279|ref|ZP_05648932.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2]
gi|357050169|ref|ZP_09111377.1| formamidopyrimidine-DNA glycosylase [Enterococcus saccharolyticus
30_1]
gi|257803443|gb|EEV32265.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2]
gi|355381992|gb|EHG29102.1| formamidopyrimidine-DNA glycosylase [Enterococcus saccharolyticus
30_1]
Length = 280
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K +K + ++I+ F A + G+ + R+GK
Sbjct: 1 MPELPEVETVRRGLEK-LILNKTIKEMEIRWPRIIESPEVPIFAAMLKGQQFQAFDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + + + P K++ + DG EL
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEFFEKEGVPDKHTHVIFQFTDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + ++ I +LGP+ L E + +FT L K K IK LLLDQ
Sbjct: 106 HYRDVRKFGRMTLVEKDQSSTYKGIMQLGPEPLPELFLLTDFTRDLKKSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q+A +L++ L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWEAKIHPEQSAATLNEAEINLLHRAIIDVLARAVEAGGTTIRTY 224
>gi|241888677|ref|ZP_04775984.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC
10379]
gi|241864700|gb|EER69075.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC
10379]
Length = 285
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 112/232 (48%), Gaps = 29/232 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK----SIIADDNKV----IDGVSASDFEASVLGKAI 52
MPELPEVE + +EE I KKI+ ++ D +KV I S F SV GK I
Sbjct: 1 MPELPEVENIKFGLEEVVINKKIINITYSKVVEDSHKVGKMAIVKQKLSAFSDSVKGKEI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK----YS 108
R+GK L+ L+ + FGMTGA ++ VKD E +K +
Sbjct: 61 EKLSRRGKYLYFTLNEGYIIT-HFGMTGAFFL------------VKDIAEITNKNYYKHQ 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
EL G +L ++D RRF ++R ++D T P L P+ + F L + K
Sbjct: 108 HVIFELSTGEKLVYSDIRRFGELRYIDDITKFKPFINLAPEPF-DKKAKKYFLSKLEENK 166
Query: 169 I---TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
+IKALLL+ + G GN EVLY+ KIHPL A LSK+ +L K
Sbjct: 167 YREQSIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKESLFK 218
>gi|386391951|ref|ZP_10076732.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio sp. U5L]
gi|385732829|gb|EIG53027.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio sp. U5L]
Length = 289
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 116/236 (49%), Gaps = 25/236 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ +G+ +V I A D KV+ + + + + G+ I + R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVVV-GIEAPDRKVLATPKTRAAWAKAAAGRTITAVSRRA 59
Query: 60 KNLWLRLDSPPFPSFQFGMTG--------AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K L + L P G G A ++K R + TD P Y++
Sbjct: 60 KLLLVHLGPGPASGSVPGGPGLDEDTLLFAFHLK-----MTGRFHIAPTDAPPPAYARLL 114
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEP--MTVDEFTDSLSK 166
V L DG L F+D RRF RLL P ++ P + LGP EP MT + F +LS+
Sbjct: 115 VRLGDGQSLVFSDMRRFGTARLLT-PQALSDWPFYATLGP----EPWDMTPEAFEAALSR 169
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ IKA+LLDQ+ I+GIGN ADE L+ A I P A SLS LL ++ V
Sbjct: 170 RTTRIKAVLLDQTVIAGIGNIYADESLFAAGIRPDAPAKSLSAGQRQKLLAAVQAV 225
>gi|359783121|ref|ZP_09286338.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas psychrotolerans L19]
gi|359369009|gb|EHK69583.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas psychrotolerans L19]
Length = 270
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H +G+++ + I+ D + D + + G+ I + R+ K
Sbjct: 1 MPELPEVETTRRGIAPHVVGQRVRRVIVRDGR--LRWPVPEDLDVRLSGQRIEAVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R +S GM+G++ + D+ P+K+ +EL+ GL L
Sbjct: 59 YLLIRAESGTLIG-HLGMSGSLRLV-------------PADQPPAKHEHVDIELESGLSL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + DP + +S+LGP+ L E + + + +K ++D +
Sbjct: 105 RYTDPRRFGALLWTQDPHAHVLLSKLGPEPLTEAFDGGRLYELSRGRSMAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A I P + A S+S+ L + IK+V
Sbjct: 165 VVGVGNIYAAEALFAAGIDPRRAAGSVSRARYERLAEEIKKV 206
>gi|406706871|ref|YP_006757224.1| formamidopyrimidine-DNA glycosylase Fpg [alpha proteobacterium
HIMB5]
gi|406652647|gb|AFS48047.1| formamidopyrimidine-DNA glycosylase Fpg [alpha proteobacterium
HIMB5]
Length = 287
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 5/224 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ ++ IGKKI K +I + N + FE + K +++ +R K
Sbjct: 1 MPELPEVEIVRLSLSKNIIGKKINKVLIRNRN--LRFKLKFSFEKHLKNKFVINIYRFSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYI-KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + L+ F GM+G I+I K Y ++ + P K++ + +D L
Sbjct: 59 YLIIELNDKSFCIIHLGMSGTIHILKKNKKNIYTNTSFYHSPGLPKKHNHVEISFND-LT 117
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L + D RRF +++ + ++ GP+ + +D + KK IK+ LLDQ
Sbjct: 118 LVYNDPRRFGFFQIVKNKENLTNRFKNYGPEPFDKNFNLDYMANYFKDKKKDIKSFLLDQ 177
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++SGIGN A+E+LY +KI+P L K L+K K+V
Sbjct: 178 KFVSGIGNIYANEILYLSKINPKIPVKKLKKTQFKLLIKNSKKV 221
>gi|409997557|ref|YP_006751958.1| hypothetical protein BN194_18920 [Lactobacillus casei W56]
gi|406358569|emb|CCK22839.1| hypothetical protein BN194_18920 [Lactobacillus casei W56]
Length = 299
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 18 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 74
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 75 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 122
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 123 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPT--PRTFDETEFARRLKRHHKPIKSVL 180
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQ 231
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S
Sbjct: 181 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 240
Query: 232 FY 233
Y
Sbjct: 241 TY 242
>gi|392951516|ref|ZP_10317071.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Hydrocarboniphaga effusa AP103]
gi|391860478|gb|EIT71006.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Hydrocarboniphaga effusa AP103]
Length = 272
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H +G++I + ++ + K + A DF ++G+ I++ R+GK
Sbjct: 1 MPELPEVETVRRGVEPHVLGRRIERVVVRE--KRLRWPIAEDFVDKLIGRRIVATERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
L L LD+ GM+G +++ G A+ K+ VELDDG
Sbjct: 59 YLQLVLDNGDRLLVHLGMSGRLFVLRSGHALL---------------KHDHVDVELDDGT 103
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSK-KKITIKALLL 176
L F D RRF + L + + P+ + +GP+ + E+ +LS+ +K +K+ ++
Sbjct: 104 LLRFNDPRRFGAMLLWHSGEPLHPLLATMGPEPFSDEFN-GEYLHTLSRGRKTAVKSFIM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQF 232
D + G GN A E L++A I P + A +S+ L I+EV A G +L+
Sbjct: 163 DGGVVVGAGNIYAAESLFRAGIRPTRAASDVSRPRYDRLAVAIREVLAAAIEQGGTTLRD 222
Query: 233 YKCYFAKPYVHKK-----HRENKICRL 254
Y P ++ R+ + CR+
Sbjct: 223 YAGADGAPGYFQQVLDVYGRDGEACRV 249
>gi|333991296|ref|YP_004523910.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601]
gi|333487264|gb|AEF36656.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601]
Length = 278
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +G+ I + V +D +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHLVGRTIAGVRVHHPRAVRRHDAGPADLTGRLLDARIVGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L + GM+G + + + T++ R A LDDG +
Sbjct: 61 KYLWLLLSTDEALVVHLGMSGQMLLGDLPDTRHLRIAAV---------------LDDGTK 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+SF D+R F +L + D + VP P++ L D L + + L +K IK
Sbjct: 106 VSFVDQRTFGGWQLTDLVAVDDSVVPLPVAHLARDPLDPRFDAESVVNVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----------- 223
LLDQ+ +SGIGN ADE L++A I + A +LS+ LL+ + V
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAGIRGTRMADALSRPRLRALLESARAVMSDALAAGGTSF 225
Query: 224 EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
++L V++ YF++ + RE++ CR
Sbjct: 226 DSLYVNVNGESGYFSRS-LDAYGREDEPCR 254
>gi|419709507|ref|ZP_14236975.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M93]
gi|382943388|gb|EIC67702.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M93]
Length = 286
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 36/273 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG--- 227
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V R AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 -------VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + ++ RE + CR
Sbjct: 226 TSFDDLYVNVNGESGYFDR-WLEAYGREGEPCR 257
>gi|191638698|ref|YP_001987864.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei BL23]
gi|385820412|ref|YP_005856799.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W]
gi|385823599|ref|YP_005859941.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II]
gi|418005432|ref|ZP_12645425.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW1]
gi|190713000|emb|CAQ67006.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA
glycosylase) (DNA-(apurinic or apyrimidinic site) lyase
mutM) (AP lyase mutM) [Lactobacillus casei BL23]
gi|327382739|gb|AEA54215.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W]
gi|327385926|gb|AEA57400.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II]
gi|410546829|gb|EKQ21073.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW1]
Length = 282
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|41326247|emb|CAF20409.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE [Corynebacterium glutamicum
ATCC 13032]
Length = 277
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 122/252 (48%), Gaps = 40/252 (15%)
Query: 11 RRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRL 66
RR +E+H +G IV + + A N++ G + EA++ G + +A R+GK LWL L
Sbjct: 2 RRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAKRRGKFLWLEL 58
Query: 67 -DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
D+P + GM+G + IK + D S + + VELD+G
Sbjct: 59 IDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHLRAKVELDNGD 105
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
E+ F D+R F L + VP +S + D L E +L +K IK LLL+
Sbjct: 106 EVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSEIKRLLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EAL 226
Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V +AL
Sbjct: 166 QEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKALAQGGTSFDAL 225
Query: 227 GVSLQFYKCYFA 238
V++ YFA
Sbjct: 226 YVNVNGNSGYFA 237
>gi|379737164|ref|YP_005330670.1| Formamidopyrimidine-DNA glycosylase [Blastococcus saxobsidens DD2]
gi|378784971|emb|CCG04642.1| Formamidopyrimidine-DNA glycosylase [Blastococcus saxobsidens DD2]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 126/260 (48%), Gaps = 33/260 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ G+ + + V + +D F ++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLEQWIAGRTVATVEVQHPRAVRRHLEGADHFVQALTGRTLAAAHRRG 60
Query: 60 KNLWLRLDSP-PFPSFQ-----FGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L P PS + GM+G + ++ K SA +T F
Sbjct: 61 KYLWLPLAEPDGTPSGRALVAHLGMSGQLLVE-------KPSAPDET-----HLRARFTF 108
Query: 114 LDDGLELSFTDKRRF--------AKVRLLNDPTS--VPP-ISELGPDALLEPMTVDEFTD 162
D G EL F D+R F A+ + P + +PP ++ + D L VD F+
Sbjct: 109 ADGGRELRFVDQRTFGGLAVEECARAGGVAGPAAEEIPPRLAHIAIDPLDPSFDVDAFSV 168
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+L +++ +K LLDQ+ I G+GN ADE L++A++H + L+ A LL+ +++V
Sbjct: 169 ALRRRRTEVKRALLDQTLIGGVGNIYADESLWRARLHGARPTDKLTGAQVADLLEGVRDV 228
Query: 223 REALGVSLQFYKCYFAKPYV 242
LG SL F YV
Sbjct: 229 ---LGESLAQGGTSFDSLYV 245
>gi|301066753|ref|YP_003788776.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei str.
Zhang]
gi|300439160|gb|ADK18926.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei str.
Zhang]
Length = 282
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|256617749|ref|ZP_05474595.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200]
gi|256597276|gb|EEU16452.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200]
Length = 280
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ V G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQVAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|417987088|ref|ZP_12627650.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 32G]
gi|410524152|gb|EKP99069.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 32G]
Length = 282
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ VP +++LGP+ EF L + IK++LLD
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFY 233
Q+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S Y
Sbjct: 166 QTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTY 225
>gi|436833874|ref|YP_007319090.1| DNA-formamidopyrimidine glycosylase [Fibrella aestuarina BUZ 2]
gi|384065287|emb|CCG98497.1| DNA-formamidopyrimidine glycosylase [Fibrella aestuarina BUZ 2]
Length = 272
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 18/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E + + I SI +D K++ + +E + G+ R GK
Sbjct: 1 MPELPEVEIRRMYLEATSLAQPI-DSITVEDKKLLTTEFDTLYE-KLEGRQFTHTRRVGK 58
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
NL++ D P FGMTG + +Y ++V ++++ +G
Sbjct: 59 NLFIYTDDPRVILRMHFGMTGDL--------EYYHNSVDR-----PRHARIVFYFTNGFC 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F R+F ++ L+ND + ++ PDAL + + D L K++ IK +LLDQS
Sbjct: 106 LGFICPRKFERIGLVNDVDEFLRLKKIAPDAL--SIELGTLRDKLKKRRSPIKPVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+G+GNW+ DEVL+QAK+HP + LS+ + + I+ V
Sbjct: 164 TTAGLGNWIVDEVLFQAKVHPSAVSAELSEAEVEAIHEAIQLV 206
>gi|392393531|ref|YP_006430133.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524609|gb|AFM00340.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 273
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ + + +I + I+ ++G F +V G I S R+GK
Sbjct: 1 MPELPEVETIRRSLCQRILNLRI-EDILIRWPGAVEGYEGKTFADTVKGLRIQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ MTG R + P K++ ++L G E+
Sbjct: 60 YLLFTLEEGWSFIAHMRMTG-------------RLVYHAQGQEPEKHTHVVLKLSSG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L + +E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLKQPSLARLGPEPLEGGFSAEELARRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
+ ++G+GN ADE L++A I P + A SL+KE L I +V E A G S + Y+
Sbjct: 166 NLLAGVGNIYADEALFRAGIAPERCANSLTKEETEKLYTAICQVLEEGIAANGTSFRDYQ 225
>gi|430835805|ref|ZP_19453792.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0680]
gi|430489167|gb|ELA65800.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0680]
Length = 278
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
S ++G+GN DE L++AKIHP Q A +L + L + + EA G +++ Y
Sbjct: 166 SLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSY 224
>gi|297559195|ref|YP_003678169.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296843643|gb|ADH65663.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 284
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH +G+ + + V + +DF A + G+ +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHALGRTVGAVEVLHPRAVRRYLPGPADFAARLSGRVPTAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD+ GM+G + ++ DE ++ + + L DG E
Sbjct: 61 KYLWLVLDNGEMLLTHLGMSGQMLVQ----------PEGKPDE---RHLRVRLPLSDGTE 107
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDAL----LEPMTVD----EFTDSLSKKKITI 171
L F D+R F + + VP + E P ++ L+P+ D +F +L ++ +
Sbjct: 108 LRFVDQRTFGHLMV-----DVPGVREDVPSSVDHIALDPLDPDFVAEDFVRALRARRTEV 162
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVS 229
K LLDQS ISG+GN ADE L+++++H ++ LS LL + +V EAL V
Sbjct: 163 KRALLDQSLISGVGNIYADEALWRSRLHWARSTRELSDAEAVELLGHVGQVMNEALEVG 221
>gi|219848489|ref|YP_002462922.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM
9485]
gi|254789432|sp|B8G9X1.1|FPG_CHLAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|219542748|gb|ACL24486.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM
9485]
Length = 275
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ + + IV D +++ +F A V G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLT-PPPPEFAALVAGRRIEAVGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD+ G T AI+++ A D + + F ++LDDG L
Sbjct: 60 WLLLTLDA--------GWTLAIHLRMSGHLLVAEPAAAD-----APHVHFALDLDDGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + + GP+ L + T + L ++ IKALLLDQ
Sbjct: 107 IFDDQRKFGRVHLLDSTGLLALDAAHGPEPLTDDFTPAVLAERLRNRQAPIKALLLDQRL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYKCY 236
I+GIGN A+E L+ A IHPL +L+ + A L I+ V +A+ G SL+ Y+
Sbjct: 167 IAGIGNIYANEALWLAGIHPLTPGGTLTVDQIAALHHAIRLVLADAIANQGSSLRNYRDG 226
Query: 237 FAKPYVHKKH 246
+ + +++H
Sbjct: 227 YGRRGNYQEH 236
>gi|189425027|ref|YP_001952204.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ]
gi|189421286|gb|ACD95684.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ]
Length = 271
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 25/215 (11%)
Query: 1 MPELPEVEAARRAI---EEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE+ + + IG+ +V+ + N VIDG AS +V G +R
Sbjct: 1 MPELPEVESVLQCLTTSNPSLIGR-LVREVRILRNSVIDG-EASAVVQTVTGSTCCDVYR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVE 113
GK L+ FG G K V + + R + E ++++F +
Sbjct: 59 HGKYLF------------FGFQGHSASKRVWLALHLRMTGRLFLVPEQEIAERHTRFALL 106
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LD GL L F D R F +V L++DP+ V S+LGPDALL + F D L + +K
Sbjct: 107 LDHGLALRFDDPRAFGRVWLVDDPSEV--TSKLGPDALL--IQQKTFLDRLHGARRQLKP 162
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
LLLDQ +++G+GN ADE L++A++HP + + L+
Sbjct: 163 LLLDQGFVAGVGNIYADETLFRAQLHPARLSADLT 197
>gi|328957054|ref|YP_004374440.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4]
gi|328673378|gb|AEB29424.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4]
Length = 278
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 128/241 (53%), Gaps = 22/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ +E+ + + ++S+ +++I G + ++F+ ++G+ I+ R+G
Sbjct: 1 MPELPEVETVRKGLEK-LVSEATIESVDIYWDRIISGPIETTEFKRILMGEKIMEFDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +R Q+ + + ++G + V+++ K++ L DG +
Sbjct: 60 KYIIIRFK-------QWALVSHLRMEG-------KYEVEESSAPLKKHTHVVFHLADGRD 105
Query: 120 LSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L + + + I LGP+ +E F +L KK IK LLLD
Sbjct: 106 LRYLDVRKFGRMTLVPIGEEFTATGIKLLGPEPTVETFDEAIFYKTLQTKKRAIKPLLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q ++G+GN DE L+ AK+HPL+TA SL K + L +K + + EA G +++ Y
Sbjct: 166 QKIVAGLGNIYVDEALFLAKMHPLRTANSLQKNEVSLLHEAIIKVLGDAVEAGGTTIRTY 225
Query: 234 K 234
+
Sbjct: 226 Q 226
>gi|423122718|ref|ZP_17110402.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5246]
gi|376391999|gb|EHT04666.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5246]
Length = 269
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G I+ ++I + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGATILHAVI-RNGRLRWPVSEEIYRLSDI--PVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPGG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRSLEGHPALAHLGPEPLSDDFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECERLVKVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + R+ ++CR+
Sbjct: 223 SDGKPGYFAQELQVYGRKGELCRV 246
>gi|296270739|ref|YP_003653371.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM
43833]
gi|296093526|gb|ADG89478.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM
43833]
Length = 294
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 111/241 (46%), Gaps = 38/241 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I + + V + D A + G+ +LSA R+GK
Sbjct: 1 MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRR--NTGDLPARLKGRPLLSAERRGK 58
Query: 61 NLWLRLDS--PPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
LWL L P P GM+G + + TD
Sbjct: 59 YLWLPLGDGDPADPREAEEALVVHLGMSGQLLL---------------TDRGAPAERHLR 103
Query: 112 VEL---DDGLELSFTDKRRFAKVRLLNDPTS------VP-PISELGPDALLEPMTVDEFT 161
V L DDG EL F D+R F +L P + VP PI+ + PD L E D F
Sbjct: 104 VRLGFADDGPELRFVDQRTFGH--MLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFA 161
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
L++++ +K LLDQS ISG+GN ADE L++A++H + +L+ LL ++
Sbjct: 162 HRLTRRRTGLKRALLDQSLISGVGNIYADEALWRARLHWARATETLTAAEVTELLAQVRA 221
Query: 222 V 222
V
Sbjct: 222 V 222
>gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|166215630|sp|A6TFM6.1|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 269
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|149182833|ref|ZP_01861294.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1]
gi|148849448|gb|EDL63637.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1]
Length = 274
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK+I + V +F+ S+ G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLAELVTGKRIKSVSVFWPKMVKLPDEVEEFKLSLQGETIQGVDRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ D ++ + + ++G R V DE K++ +DG EL
Sbjct: 61 FLILQTD-------RYSLVSHLRMEG-------RYGVFPGDEEVEKHTHVIFHFEDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ TV+ T+ L+K + +KA+LLDQ
Sbjct: 107 RYKDVRKFGTMHLFPKGEENLSLPLSQLGPEPFSPNFTVNYLTEKLAKTERAVKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ + G+GN DE L+++ IHP + A S+ K L + + E E G +++ Y
Sbjct: 167 TVLVGLGNIYVDEALFRSGIHPARKAKSVKKSEMKKLHNEIIDTLSEAVEQGGSTIRSY 225
>gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152]
gi|81679878|sp|Q5YS09.3|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica
IFM 10152]
Length = 294
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + I V ++ S D A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60
Query: 60 KNLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL D P GM+G + ++ A K++
Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAPV-------------EKHAHI 107
Query: 111 FVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
LDDG EL F D+R F L D + VP P++ + D L + ++
Sbjct: 108 RAALDDGSELRFVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIR 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-- 223
K IK +LLDQ+ +SGIGN ADE L++A I+ + A L++ + LL ++ V
Sbjct: 168 AKNSEIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTRPAVRRLLAEVRAVMLE 227
Query: 224 ---------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + R+++ CR
Sbjct: 228 ALAAGGTSFDALYVNVNGQSGYFERALA-VYGRQDEPCR 265
>gi|403736853|ref|ZP_10949814.1| formamidopyrimidine-DNA glycosylase [Austwickia chelonae NBRC
105200]
gi|403192948|dbj|GAB76584.1| formamidopyrimidine-DNA glycosylase [Austwickia chelonae NBRC
105200]
Length = 292
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ I ++ +S ASD A G+ ++ R+G
Sbjct: 1 MPELPEVEVVRRGLEEHVLGRTIGALHLSGSRVARRHLSGASDLSARAAGQRCIAVERRG 60
Query: 60 KNLWLRLDSPPFPSF--QFGMTGAIYIKGVAVTQYK-RSAVKDTDEWPSKYSKFFVELDD 116
K LW+ L +P + + GM+G + + ++K + A D D DD
Sbjct: 61 KYLWMVL-APSYEALIIHLGMSGQMLVSSKECPRHKHQHATFDFD-------------DD 106
Query: 117 GLELSFTDKRRFAKVR---LLND--------PTSVPP-ISELGPDALLEPMTVDEFTDSL 164
G +L F D+R F + L+ D VP I+ + PD L ++ +L
Sbjct: 107 GFQLRFVDQRTFGGLAWSDLIPDSKLTYSELAHGVPASIAHIAPDPLEAGFVPEDLAMAL 166
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K++ +K LLDQ +SGIGN ADE L++A +H A +LS + L+ +EV
Sbjct: 167 RKRRTAVKRALLDQRLVSGIGNIYADEALWRAGVHGEHPASALSADRIIGLIGYAREV 224
>gi|402818280|ref|ZP_10867864.1| formamidopyrimidine-DNA glycosylase MutM [Paenibacillus alvei DSM
29]
gi|402504027|gb|EJW14558.1| formamidopyrimidine-DNA glycosylase MutM [Paenibacillus alvei DSM
29]
Length = 276
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ + GK+I + + + + F ++ G I R+GK
Sbjct: 1 MPELPEVETVKQTLNTLVAGKRIERVTVTLPRIIQRPLEIEQFCDALQGHTIERVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD S M G R V DE K++ DDG EL
Sbjct: 61 FLRILLDGLVLVS-HLRMEG-------------RYGVYKADEPVEKHTHVIFHFDDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + +PP+ +LG + L TV+ F +++ +++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFAAGEEWELPPLHKLGVEPLSAEFTVERFAEAMRRRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
+ GIGN DE L++A IHP + A L+ E A L + I +E EA G S++ Y
Sbjct: 167 HIVVGIGNIYVDEALFRAGIHPNRAADELTDEEYALLHRSIIDTLQEAVEAGGSSIKSY 225
>gi|419765188|ref|ZP_14291427.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397742316|gb|EJK89535.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 32 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 88
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 89 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 133
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 134 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 193
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
+ G+GN A E L+ A IHP + A SLS+E C L+K IK
Sbjct: 194 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIK 234
>gi|288553688|ref|YP_003425623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus pseudofirmus OF4]
gi|120474|sp|P19210.3|FPG_BACFI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|39475|emb|CAA37877.1| unnamed protein product [Bacillus firmus]
gi|288544848|gb|ADC48731.1| formamidopyrimidine-DNA glycosylase [Bacillus pseudofirmus OF4]
Length = 274
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK I + N + + +FE ++ + I S R+GK
Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G R + + +E ++ DG EL
Sbjct: 61 FLLFEFDD-------IVMVSHLRMEG-------RYGLYEKEEPLPPHTHVIFHFTDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L V P++ LG + E T + ++ K IK LLDQ
Sbjct: 107 RYQDVRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
+ G+GN DE L++A+IHP + A SLSKE A L K I +E E G S++ Y
Sbjct: 167 KTVVGLGNIYVDEALFRARIHPERLAHSLSKEEMAVLHKAIVSTLEEAVEMGGSSIKSY 225
>gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
gi|365140995|ref|ZP_09346900.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 4_1_44FAA]
gi|386037118|ref|YP_005957031.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae KCTC 2242]
gi|402778434|ref|YP_006633980.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|424832948|ref|ZP_18257676.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931209|ref|ZP_18349581.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425074303|ref|ZP_18477406.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425083749|ref|ZP_18486846.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425084939|ref|ZP_18488032.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425093862|ref|ZP_18496946.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932141|ref|ZP_19005725.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae JHCK1]
gi|449048141|ref|ZP_21731111.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae hvKP1]
gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
gi|339764246|gb|AEK00467.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae KCTC 2242]
gi|363653237|gb|EHL92220.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 4_1_44FAA]
gi|402539405|gb|AFQ63554.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405595768|gb|EKB69138.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405598241|gb|EKB71470.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405608354|gb|EKB81305.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405610358|gb|EKB83162.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805396|gb|EKF76647.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414710394|emb|CCN32098.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426307408|gb|EKV69490.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae JHCK1]
gi|448877108|gb|EMB12078.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae hvKP1]
Length = 269
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|387130142|ref|YP_006293032.1| formamidopyrimidine-DNA glycosylase [Methylophaga sp. JAM7]
gi|386271431|gb|AFJ02345.1| Formamidopyrimidine-DNA glycosylase [Methylophaga sp. JAM7]
Length = 272
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 30/265 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G+ I++ +I D ++ + A D E + G+ IL R+ K
Sbjct: 1 MPELPEVETTRVGIAPHIEGQ-IIERVIVRDYRLRWPIPA-DIEKILTGQQILQVQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + + GM+G R V DT P+K+ + +GL L
Sbjct: 59 YLLFKTPTGTL-IMHLGMSG-------------RMRVVDTPVKPAKHDHVDITFRNGLTL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF + T + P I LGP+ L E T D K++++IK +++
Sbjct: 105 RFTDPRRFGAMLWTTTSTDLHPLIHHLGPEPLSEDFTGDSLYQRSRKRQVSIKTFIMNAE 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK- 234
+ G+GN A E + A++HP A L++ L IK V E A G +L+ ++
Sbjct: 165 IVVGVGNIYASEACFLARLHPEMKAGKLTRPQAERLATAIKTVLEKAIAAGGTTLRDFRD 224
Query: 235 -----CYFA-KPYVHKKHRENKICR 253
YFA K +V+ R N+ CR
Sbjct: 225 AAGNPGYFAQKLFVYA--RANQPCR 247
>gi|453078060|ref|ZP_21980794.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus triatomae BKS 15-14]
gi|452757695|gb|EME16097.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus triatomae BKS 15-14]
Length = 287
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 32/270 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G ++ + V + D A + G ++ +A R+G
Sbjct: 1 MPELPEVEVVRRGLTAHVVGSRMDAVEVLHPRAVRRHLPGGDDLVARLTGLSVTAAQRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL +D GM+G + ++ V + K+ + ELD G
Sbjct: 61 KYLWLEVDPGDLAVVVHLGMSGQMLVQTPDVAR-------------EKHLRILAELDSGA 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
EL F D+R F L D T+VP P++ + D L D ++ +K+ +K
Sbjct: 108 ELRFVDQRTFGGWALAPLVEVDGTAVPEPVAHIARDPLDPLFDPDVAIAAIRRKQSEVKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR---------- 223
+LLDQ+ +SG+GN ADE L++++IH + A L++ LL + EV
Sbjct: 168 VLLDQTVLSGVGNIYADEALWRSRIHGNRPADRLTRPQVRLLLDSVTEVMTEALAQGGTS 227
Query: 224 -EALGVSLQFYKCYFAKPYVHKKHRENKIC 252
+AL V++ YF + + RE++ C
Sbjct: 228 FDALYVNVNGESGYFDR-SLSAYGREDEPC 256
>gi|418421370|ref|ZP_12994544.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus
subsp. bolletii BD]
gi|363996450|gb|EHM17665.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus
subsp. bolletii BD]
Length = 286
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ D V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHDRAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLITVDGSELPEPVAHIARDPLDELFEVRAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L V
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVLDSAAAV 216
>gi|309805278|ref|ZP_07699330.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
09V1-c]
gi|312871811|ref|ZP_07731899.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
3008A-a]
gi|329920100|ref|ZP_08276931.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
1401G]
gi|308165512|gb|EFO67743.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
09V1-c]
gi|311092753|gb|EFQ51109.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
3008A-a]
gi|328936554|gb|EGG32998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
1401G]
Length = 276
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
Length = 269
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|452975464|gb|EME75283.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sonorensis L12]
Length = 275
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + IGK I I N + +F ++G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLAGLVIGKTIESVEIRWTNIIKRPAEPEEFARLLIGETIQSVDRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD F M + ++G + + E K+ DG EL
Sbjct: 61 FLLFHLD-------HFTMVSHLRMEG-------KYGLHQNGEPMDKHVHVIFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+ +LGP+ + T+ + L K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEQTELPLKQLGPEPFSDEFTIGYLRERLKKTSRFVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ G+GN DE L++A IHP A L+K+ A L +K +KE EA G +++ Y
Sbjct: 167 KTVVGLGNIYVDEALFRAGIHPETAANKLTKKQTALLHEEIIKTLKEAVEAGGSTVRSY 225
>gi|324997986|ref|ZP_08119098.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia sp. P1]
Length = 286
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE AR A+ G+ I + D+ V D +++ G + +AHR GK
Sbjct: 19 MPELPEVENAR-AVLAQATGRTIT-DVDDRDDWVCRPHRPGDIASALKGGRLTAAHRIGK 76
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVEL 114
+W D+ P GM G I + + + D ++ +F V
Sbjct: 77 TMWCDTETSDGDAGPALGVHLGMGGRIVVTNSGGERIGGGPARPDRQARKREWDRFTVTF 136
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
DDG + DKRR +VRL P +S LGPDA E + F + L + + +KA
Sbjct: 137 DDGGQFRLFDKRRLGRVRL------DPDLSGLGPDA--EGLRPAVFRERLLRGRSAVKAR 188
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LLDQS ++G+GN +ADE L+QA+I P L++
Sbjct: 189 LLDQSVLAGVGNLLADETLWQARIAPATPVRDLTR 223
>gi|402573281|ref|YP_006622624.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus meridiei
DSM 13257]
gi|402254478|gb|AFQ44753.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus meridiei
DSM 13257]
Length = 273
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H G KI + + + VI FE V + I R+GK
Sbjct: 1 MPELPEVETIRRTLAQHVNGLKIKEVKLVWSSAVISW-EDQPFEVLVADRQIQRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RLD+ MTG R + P K++ LD G E+
Sbjct: 60 YLLIRLDNDLTLIAHMRMTG-------------RLNYYTEKQPPDKHTHVVFCLDKG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + S+ + +LGP+ L T + KKK+++KA LLDQ
Sbjct: 106 HFSDVRKFGRIQAIPTSRSISDSSLGKLGPEPLELEFTPQVLKERFGKKKVSVKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN DE L+QA+I P +T SL++E A L + I+ V + A G S + Y+
Sbjct: 166 HVLAGLGNIYVDESLFQARISPNRTVDSLTEEELAELHQAIRNVLQAGIDAQGTSFRDYR 225
>gi|259500514|ref|ZP_05743416.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335]
gi|302191204|ref|ZP_07267458.1| formamidopyrimidine-DNA glycosylase [Lactobacillus iners AB-1]
gi|309808040|ref|ZP_07701959.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
01V1-a]
gi|312875632|ref|ZP_07735633.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2053A-b]
gi|325912596|ref|ZP_08174979.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B]
gi|349611544|ref|ZP_08890779.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 7_1_47FAA]
gi|259167898|gb|EEW52393.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335]
gi|308168723|gb|EFO70822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
01V1-a]
gi|311088886|gb|EFQ47329.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2053A-b]
gi|325478017|gb|EGC81146.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B]
gi|348608637|gb|EGY58617.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 7_1_47FAA]
Length = 276
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM
15272]
gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM
15272]
Length = 284
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 42/273 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-------DFEASVLGKAIL 53
MPELPEVE R + +H +G+ + D +V+D S DF + G+ ++
Sbjct: 1 MPELPEVEVVRLGLVDHVVGRTV------SDVRVLDARSLRRHLPGPVDFADRLRGRTVV 54
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFV 112
A R+GK LWL LD + GM+G + I T++ P ++ + +
Sbjct: 55 DACRRGKYLWLPLDDGSALTAHLGMSGQMLIG--------------TEQTPDPRHLRVGL 100
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKIT 170
+LDDG L F D+R F + + + + P ++ + D L +EF+ L +++
Sbjct: 101 DLDDGTRLHFVDQRIFGGLAVSDQVSDGVPAAMAHIARDPLDPAFDAEEFSARLRRRQTG 160
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR------- 223
+K LLDQ+ +SGIGN ADE L++ +H + L + L++ + +V
Sbjct: 161 VKRALLDQTLVSGIGNIYADEALWRVPLHYARNTRHLRRAEIDALVEHVTDVMRAALEQG 220
Query: 224 ----EALGVSLQFYKCYFAKPYVHKKHRENKIC 252
+AL V++ YF + +H RE + C
Sbjct: 221 GTSFDALYVNVNGQSGYFDR-SLHAYGREGEPC 252
>gi|417788014|ref|ZP_12435697.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
NIAS840]
gi|334308191|gb|EGL99177.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
NIAS840]
Length = 276
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +I+ ++F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIIN--EETEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ E V++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEMQTAGLAKLGPEPKEETFIVEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEV---REALGVSLQFYK 234
+ ++G+GN ADEVL+ +KIHP A L+KE L IKE+ EA G +++ Y
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTKEEIEVLRDNIIKELALATEAGGTTIRSYT 225
Query: 235 CYF 237
F
Sbjct: 226 DAF 228
>gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC
19977]
gi|419714447|ref|ZP_14241863.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M94]
gi|420864681|ref|ZP_15328070.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0303]
gi|420869470|ref|ZP_15332852.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RA]
gi|420873915|ref|ZP_15337291.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RB]
gi|420910873|ref|ZP_15374185.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-R]
gi|420917326|ref|ZP_15380629.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-S]
gi|420967761|ref|ZP_15430965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0810-R]
gi|420983877|ref|ZP_15447044.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0728-R]
gi|421008680|ref|ZP_15471790.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0119-R]
gi|421013850|ref|ZP_15476928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-R]
gi|421018794|ref|ZP_15481851.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-S]
gi|421024368|ref|ZP_15487412.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0731]
gi|421029996|ref|ZP_15493027.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-R]
gi|421035823|ref|ZP_15498841.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-S]
gi|421044269|ref|ZP_15507269.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0116-S]
gi|238688908|sp|B1MDL2.1|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium
abscessus]
gi|382945566|gb|EIC69860.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M94]
gi|392063397|gb|EIT89246.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0303]
gi|392065390|gb|EIT91238.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RB]
gi|392068940|gb|EIT94787.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RA]
gi|392110217|gb|EIU35987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-S]
gi|392112867|gb|EIU38636.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-R]
gi|392168873|gb|EIU94551.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0728-R]
gi|392196828|gb|EIV22444.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0119-R]
gi|392200705|gb|EIV26310.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-R]
gi|392207424|gb|EIV33001.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-S]
gi|392211165|gb|EIV36731.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0731]
gi|392223216|gb|EIV48738.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-R]
gi|392224318|gb|EIV49839.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-S]
gi|392233722|gb|EIV59220.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0116-S]
gi|392250268|gb|EIV75742.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0810-R]
Length = 286
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAV 216
>gi|312874220|ref|ZP_07734254.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2052A-d]
gi|311090290|gb|EFQ48700.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2052A-d]
Length = 276
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|385800353|ref|YP_005836757.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM
2228]
gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM
2228]
Length = 276
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 20/227 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE + + KK+ + I + N + + + A F+ +LG I R
Sbjct: 1 MPELPEVETVVKGLGPLIRNKKVTEVEIREKNMIAYPKNNIKA--FKKDLLGAKIEKVKR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK + + L++ MTG + VK+ ++ K++ LDDG
Sbjct: 59 RGKYIIIELNNYKNLVIHLRMTGKLL-------------VKEVKDFRDKHTHVIFSLDDG 105
Query: 118 LELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
E+ F + R+F +V L++ P ++ LGP+ L + +++++F + ++ +K+LL
Sbjct: 106 QEIRFNNIRKFGRVYLIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLL 165
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+Q +I+GIGN ADE+L++A I P +TA LS+ + ++E+
Sbjct: 166 LNQKFIAGIGNIYADEILFRAAILPDRTADQLSESEKEAIYYNMREI 212
>gi|365902908|ref|ZP_09440731.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus malefermentans KCTC 3548]
Length = 278
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + ++ S+ K++ S FE ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLT-NLVKNAVINSVEVRYLKMVSPESPL-FEQALQGKTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M + ++G Q + S V +K++ L DG EL
Sbjct: 59 YLLFRFND------HLTMVSHLRMEGKYDVQPEGSVV-------TKHTHVIFHLSDGREL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F ++RL+N D + +P + +GP+ + + +D K TIK LLDQ
Sbjct: 106 RYTDTRKFGRMRLINTGDESVIPGLKAMGPEPTEKTLKLDYMKKIFRKSHRTIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
S I+G+GN DE L+ ++I+PLQ L E A L I
Sbjct: 166 SKIAGLGNIYVDETLWLSQINPLQQTDELPDEKIADLRDAI 206
>gi|392415757|ref|YP_006452362.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium chubuense
NBB4]
gi|390615533|gb|AFM16683.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium chubuense
NBB4]
Length = 283
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L + R+G
Sbjct: 1 MPELPEVEVVRRGLNEHVTGKTITAVRVHHPRAVRRHEAGPADLAARLLDATVTGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLADGGALVVHLGMSGQMLLGPVPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D T VP P++ + D L D + L K IK
Sbjct: 106 LSFVDQRTFGGWLIADLVTVDGTDVPAPVAHIARDPLDPQFDRDRVVNVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG------ 227
LLDQ+ +SGIGN ADE L++AK++ + A LS+ A LL V +ALG
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAKVNGARLASGLSRPKLAELLDAAAVVMTDALGQGGTSF 225
Query: 228 ----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDR-SLDVYGREGEPCR 254
>gi|307286687|ref|ZP_07566773.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109]
gi|422703428|ref|ZP_16761250.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302]
gi|306502165|gb|EFM71449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109]
gi|315165260|gb|EFU09277.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302]
Length = 280
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQVDDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|325912043|ref|ZP_08174441.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII
143-D]
gi|325475993|gb|EGC79161.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII
143-D]
Length = 276
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDTPKQKHEHVQFAFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|309803096|ref|ZP_07697193.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
11V1-d]
gi|309810236|ref|ZP_07704081.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
2503V10-D]
gi|308164604|gb|EFO66854.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
11V1-d]
gi|308169508|gb|EFO71556.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
2503V10-D]
Length = 276
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|88606811|ref|YP_505015.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ]
gi|88597874|gb|ABD43344.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ]
Length = 268
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ + IG++I + + + A DFE V G+ I S +R K
Sbjct: 1 MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVR--IADDFEQLVTGREICSVYRVAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LDS F GM+G I Y + V P K+ + G L
Sbjct: 59 YLVMQLDSGAKLVFHMGMSGRIL--------YMHAPV------PEKHDCVVFAMQHGYSL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D RRF V LL+ + ++GPD E D + K +I K++L++ +
Sbjct: 105 VFNDTRRFGLVTLLDGEGYRSLLEKMGPDPFSEAFNADCLLNMHGKARI--KSVLMNSAV 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ GIGN A E+L+ A I P + +LS+E C +++ +EV
Sbjct: 163 VVGIGNIYASEILFTAAILPHREVSTLSREECCRIVESTREV 204
>gi|406027127|ref|YP_006725959.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri CD034]
gi|405125616|gb|AFS00377.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri CD034]
Length = 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 24/228 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G I +S+ K+I+ + +DF+ ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLTQLVKGSTI-QSVDVLYAKMIN-LPPNDFKKALRGKTIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + ++G + V+ D K++ L DG +L
Sbjct: 59 YLLIRL------SDNLTIVSHLRMEG-------KYDVEPEDAPVGKHTHIIFHLTDGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ T V + +GP+ + +TVD SK + IK LLDQ
Sbjct: 106 RYNDTRKFGRMNLVDTGTEMQVAGLKTIGPEPTEDNLTVDYMQKIFSKSRKVIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
S I+G+GN ADEVL+ +KI+P Q A +L+ L+ IKE+R+ +
Sbjct: 166 SNIAGLGNIYADEVLWLSKINPQQPANTLT-------LRQIKELRKNI 206
>gi|293569013|ref|ZP_06680326.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071]
gi|291588446|gb|EFF20281.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071]
Length = 278
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRSKEVEQLRLSIIDVLDRAIEAGGTTIRSY 224
>gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS]
gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS]
gi|123369434|sp|Q1BAM5.1|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166215637|sp|A1UED7.1|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Mycobacterium sp. MCS]
gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS]
Length = 296
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----FDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV- 222
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 223 REALG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
R+ALG V++ YF + + RE + CR
Sbjct: 226 RDALGQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>gi|39996100|ref|NP_952051.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA]
gi|409911545|ref|YP_006890010.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens
KN400]
gi|81702906|sp|Q74EG5.3|FPG_GEOSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|39982865|gb|AAR34324.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA]
gi|298505115|gb|ADI83838.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens
KN400]
Length = 271
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 113/229 (49%), Gaps = 20/229 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G++ V ++ A K+ + + + G+ I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHVTGRR-VTAVTARAAKLRLPIP-PELGERLTGRVIERVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR GMTG + V P KY + LDDG L
Sbjct: 59 YLLLRCGDG-TAIIHLGMTGTLR-------------VAPAGSPPGKYDHLDLVLDDGRTL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIKALLLDQ 178
F D R+F V +DP + P +++LGP+ P+ + S S+K+ IK LL+D
Sbjct: 105 RFRDPRKFGLVLWTGSDPLAHPLLAQLGPEPF-PPLFNGSYLFSRSRKRNAAIKLLLMDN 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+ G+GN A+E L++A+IHP + A SLS+E CATL + +V R+A+
Sbjct: 164 RIVVGVGNIYANEALFRARIHPERAAGSLSEEDCATLATAVGDVLRDAI 212
>gi|336247768|ref|YP_004591478.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter aerogenes KCTC 2190]
gi|444354123|ref|YP_007390267.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Enterobacter
aerogenes EA1509E]
gi|334733824|gb|AEG96199.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter aerogenes KCTC 2190]
gi|443904953|emb|CCG32727.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Enterobacter
aerogenes EA1509E]
Length = 269
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGANILHAVVRN-GRLRWPVSEEIYRLS--DEPVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + L +G
Sbjct: 58 YLLLELRHG-WIIIHLGMSGSLRIL--------------SEEQPAEKHDHVDLVLSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHPVLAHLGPEPLSDEFNADYLQQRCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSHQECEWLVKMIKLV 205
>gi|334126199|ref|ZP_08500178.1| formamidopyrimidine-DNA glycosylase [Enterobacter hormaechei ATCC
49162]
gi|419959027|ref|ZP_14475084.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae GS1]
gi|295095221|emb|CBK84311.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA
glycosylase [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|333385859|gb|EGK57085.1| formamidopyrimidine-DNA glycosylase [Enterobacter hormaechei ATCC
49162]
gi|388605996|gb|EIM35209.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae GS1]
Length = 269
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
gi|238066645|sp|B5XTG8.1|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
Length = 269
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|372325617|ref|ZP_09520206.1| Formamidopyrimidine-DNA glycosylase [Oenococcus kitaharae DSM
17330]
gi|366984425|gb|EHN59824.1| Formamidopyrimidine-DNA glycosylase [Oenococcus kitaharae DSM
17330]
Length = 274
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + ++ +KIV ++ K++ G +F V G + R+GK
Sbjct: 1 MPELPEVETVRRGLSKYFANEKIV-AVQVLYRKLLLG-DPEEFIQQVTGSTVREVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL++ M G R A++D P K+++ +L +G ++
Sbjct: 59 FLLLRLNNRQTIVSHMRMEG-------------RYAIEDGSAQPRKHTEAIFKLANGSQI 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ + V ++ +GP+ +T+D L K K IK LLD
Sbjct: 106 FYDDTRKFGKMQLVVTGQETEEVRSLATMGPEPTEATLTLDYLFARLQKSKKAIKGWLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
Q+ ++G+GN ADEVL+ +KI+PL+ A +++E L + I
Sbjct: 166 QNNLAGLGNIYADEVLWMSKINPLRPACRINREEAELLRENI 207
>gi|443673519|ref|ZP_21138581.1| DNA-formamidopyrimidine glycosylase [Rhodococcus sp. AW25M09]
gi|443413902|emb|CCQ16919.1| DNA-formamidopyrimidine glycosylase [Rhodococcus sp. AW25M09]
Length = 293
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 25/251 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R +E H +GK V+S+ + + + D + G+ + SA R+
Sbjct: 1 MPELPEVEVVRLGLESHVVGK-TVRSVEVLHPRAVRRHDLGGLDLIGQLRGQRVSSAQRR 59
Query: 59 GKNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK LWL ++ F + GM+G + ++ + DE K+ + LDDG
Sbjct: 60 GKYLWLVMEPGDFATVVHLGMSGQMLVQPPSAP----------DE---KHLRIRARLDDG 106
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+L F D+R F L D T VP P++ + D + + + L K IK
Sbjct: 107 TDLRFVDQRTFGGWALAPIVTVDGTPVPEPVAHIARDPIDPLFDAESVVNVLRGKHTEIK 166
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQF 232
LLDQ+ +SG+GN ADE L++AKIH + A +L++ + LL + V +G +L
Sbjct: 167 RALLDQTVLSGVGNIYADEALWRAKIHGNRIAETLTRPALRRLLTAVHAV---MGEALAQ 223
Query: 233 YKCYFAKPYVH 243
F YV+
Sbjct: 224 GGTSFDALYVN 234
>gi|29375464|ref|NP_814618.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583]
gi|227554990|ref|ZP_03985037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22]
gi|229548815|ref|ZP_04437540.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC
29200]
gi|255971331|ref|ZP_05421917.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1]
gi|255973950|ref|ZP_05424536.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2]
gi|256761635|ref|ZP_05502215.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3]
gi|256960004|ref|ZP_05564175.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96]
gi|256964300|ref|ZP_05568471.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704]
gi|257083793|ref|ZP_05578154.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1]
gi|257089290|ref|ZP_05583651.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188]
gi|257415443|ref|ZP_05592437.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG]
gi|257418474|ref|ZP_05595468.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11]
gi|257421125|ref|ZP_05598115.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus
faecalis X98]
gi|293383757|ref|ZP_06629664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712]
gi|293388767|ref|ZP_06633260.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613]
gi|307271879|ref|ZP_07553147.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855]
gi|307278425|ref|ZP_07559500.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860]
gi|312904439|ref|ZP_07763598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635]
gi|312907027|ref|ZP_07766023.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
512]
gi|312952853|ref|ZP_07771715.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102]
gi|312978715|ref|ZP_07790442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
516]
gi|384517927|ref|YP_005705232.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62]
gi|422689764|ref|ZP_16747868.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630]
gi|422692166|ref|ZP_16750188.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031]
gi|422694480|ref|ZP_16752471.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244]
gi|422699768|ref|ZP_16757629.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342]
gi|422707337|ref|ZP_16765032.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043]
gi|422713361|ref|ZP_16770111.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A]
gi|422717613|ref|ZP_16774297.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B]
gi|422727399|ref|ZP_16783840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312]
gi|422731006|ref|ZP_16787387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645]
gi|422735315|ref|ZP_16791589.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341]
gi|422738964|ref|ZP_16794149.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141]
gi|428766385|ref|YP_007152496.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis str.
Symbioflor 1]
gi|39931263|sp|Q837G3.3|FPG_ENTFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|29342924|gb|AAO80688.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583]
gi|227175872|gb|EEI56844.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22]
gi|229306044|gb|EEN72040.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC
29200]
gi|255962349|gb|EET94825.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1]
gi|255966822|gb|EET97444.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2]
gi|256682886|gb|EEU22581.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3]
gi|256950500|gb|EEU67132.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96]
gi|256954796|gb|EEU71428.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704]
gi|256991823|gb|EEU79125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1]
gi|256998102|gb|EEU84622.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188]
gi|257157271|gb|EEU87231.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG]
gi|257160302|gb|EEU90262.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11]
gi|257162949|gb|EEU92909.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus
faecalis X98]
gi|291078833|gb|EFE16197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712]
gi|291081924|gb|EFE18887.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613]
gi|295113920|emb|CBL32557.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA
glycosylase [Enterococcus sp. 7L76]
gi|306504931|gb|EFM74126.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860]
gi|306511385|gb|EFM80387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855]
gi|310627012|gb|EFQ10295.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
512]
gi|310629369|gb|EFQ12652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102]
gi|310632137|gb|EFQ15420.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635]
gi|311288422|gb|EFQ66978.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
516]
gi|315145153|gb|EFT89169.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141]
gi|315148037|gb|EFT92053.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244]
gi|315152952|gb|EFT96968.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031]
gi|315155182|gb|EFT99198.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043]
gi|315157510|gb|EFU01527.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312]
gi|315163061|gb|EFU07078.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645]
gi|315167986|gb|EFU12003.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341]
gi|315171782|gb|EFU15799.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342]
gi|315574208|gb|EFU86399.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B]
gi|315577338|gb|EFU89529.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630]
gi|315581649|gb|EFU93840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A]
gi|323480060|gb|ADX79499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62]
gi|427184558|emb|CCO71782.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis str.
Symbioflor 1]
Length = 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|400537018|ref|ZP_10800552.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium colombiense CECT 3035]
gi|400330031|gb|EJO87530.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium colombiense CECT 3035]
Length = 289
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 122/278 (43%), Gaps = 42/278 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK + + V +D +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTMTAVRVHHPRAVRRHEAGPADLTVRLLNARITGTDRRG 60
Query: 60 KNLWLRLDSPPFPS-------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL LD+ P GM+G + + V + R SA+
Sbjct: 61 KYLWLLLDTEPAGQESDTALVVHLGMSGQMLLGEVPRADHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K IK LLDQ +SGIGN ADE L++AK++ + A +LS++ +L EV R+A
Sbjct: 165 KHSEIKRQLLDQQVVSGIGNIYADEALWRAKVNGARIADTLSRKQLTAVLDAAAEVMRDA 224
Query: 226 LG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE + CR
Sbjct: 225 LAQGGTSFDSLYVNVNGESGYFDRS-LDAYGREGEACR 261
>gi|229546724|ref|ZP_04435449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322]
gi|256854275|ref|ZP_05559639.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8]
gi|307275296|ref|ZP_07556439.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134]
gi|307290894|ref|ZP_07570784.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411]
gi|422685455|ref|ZP_16743671.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000]
gi|229308073|gb|EEN74060.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322]
gi|256709835|gb|EEU24879.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8]
gi|306497964|gb|EFM67491.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411]
gi|306507930|gb|EFM77057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134]
gi|315029748|gb|EFT41680.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000]
Length = 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|381211870|ref|ZP_09918941.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lentibacillus sp. Grbi]
Length = 276
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ I K I+ + N + F+ ++ ++I HR+GK
Sbjct: 1 MPELPEVETIKNTLKRFVIDKTIIDVSVFWPNIIKQPDDIDHFKHLLMKQSIKDIHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G + +V + E K++ + DG EL
Sbjct: 61 FLLFELDDAVLVS-HLRMEG-------------KYSVHPSGEPVKKHTHVIFKFSDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L D + P+++LGPD E T+D F L K IK++LLDQ
Sbjct: 107 RYNDVRKFGTMHLFKKGDERNNKPLNQLGPDPFDEAFTLDYFYQKLKKTDRAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ ++G+GN DE L++A IHPL A L K + + +KE G +++ Y
Sbjct: 167 AIVAGLGNIYVDETLFKANIHPLSKANKLKKREVKVIWEAAIYTLKEAVAQGGTTIRSY 225
>gi|282854596|ref|ZP_06263931.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139]
gi|386069697|ref|YP_005984593.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes ATCC 11828]
gi|422390077|ref|ZP_16470173.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL103PA1]
gi|422458757|ref|ZP_16535408.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA2]
gi|422463028|ref|ZP_16539647.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL060PA1]
gi|422467305|ref|ZP_16543859.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA4]
gi|422469382|ref|ZP_16545907.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA3]
gi|422565431|ref|ZP_16641080.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA2]
gi|282582178|gb|EFB87560.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139]
gi|314966092|gb|EFT10191.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA2]
gi|314981863|gb|EFT25956.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA3]
gi|315090789|gb|EFT62765.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA4]
gi|315094942|gb|EFT66918.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL060PA1]
gi|315104263|gb|EFT76239.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA2]
gi|327328031|gb|EGE69800.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL103PA1]
gi|353454064|gb|AER04583.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes ATCC 11828]
Length = 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDV 213
>gi|261207883|ref|ZP_05922568.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6]
gi|289566951|ref|ZP_06447355.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF]
gi|294617838|ref|ZP_06697449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679]
gi|406580957|ref|ZP_11056142.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD4E]
gi|406583128|ref|ZP_11058219.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD3E]
gi|406585544|ref|ZP_11060531.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD2E]
gi|406590633|ref|ZP_11064993.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD1E]
gi|410937196|ref|ZP_11369057.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. GMD5E]
gi|415897517|ref|ZP_11551092.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4453]
gi|416134168|ref|ZP_11598224.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4452]
gi|427396175|ref|ZP_18888934.1| formamidopyrimidine-DNA glycosylase [Enterococcus durans
FB129-CNAB-4]
gi|430844043|ref|ZP_19461941.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1050]
gi|430851662|ref|ZP_19469397.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1258]
gi|430860199|ref|ZP_19477803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1573]
gi|430949846|ref|ZP_19486069.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1576]
gi|431006651|ref|ZP_19489116.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1578]
gi|431229778|ref|ZP_19501981.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1622]
gi|431253116|ref|ZP_19504442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1623]
gi|431294040|ref|ZP_19506914.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1626]
gi|431370131|ref|ZP_19509830.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1627]
gi|431412449|ref|ZP_19511884.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1630]
gi|431661112|ref|ZP_19523924.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1904]
gi|431759337|ref|ZP_19547951.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3346]
gi|447912577|ref|YP_007393989.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium NRRL
B-2354]
gi|260078266|gb|EEW65972.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6]
gi|289161250|gb|EFD09146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF]
gi|291595911|gb|EFF27193.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679]
gi|364090536|gb|EHM33108.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4453]
gi|364092680|gb|EHM35028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4452]
gi|404453333|gb|EKA00398.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD4E]
gi|404457103|gb|EKA03677.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD3E]
gi|404462559|gb|EKA08291.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD2E]
gi|404469061|gb|EKA13899.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD1E]
gi|410734307|gb|EKQ76227.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. GMD5E]
gi|425722845|gb|EKU85736.1| formamidopyrimidine-DNA glycosylase [Enterococcus durans
FB129-CNAB-4]
gi|430496633|gb|ELA72692.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1050]
gi|430542244|gb|ELA82352.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1258]
gi|430552636|gb|ELA92364.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1573]
gi|430557700|gb|ELA97146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1576]
gi|430561187|gb|ELB00464.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1578]
gi|430573764|gb|ELB12542.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1622]
gi|430578204|gb|ELB16774.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1623]
gi|430581633|gb|ELB20072.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1626]
gi|430583878|gb|ELB22236.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1627]
gi|430589404|gb|ELB27532.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1630]
gi|430600232|gb|ELB37886.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1904]
gi|430626137|gb|ELB62723.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3346]
gi|445188286|gb|AGE29928.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium NRRL
B-2354]
Length = 278
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSY 224
>gi|377564337|ref|ZP_09793659.1| formamidopyrimidine-DNA glycosylase [Gordonia sputi NBRC 100414]
gi|377528519|dbj|GAB38824.1| formamidopyrimidine-DNA glycosylase [Gordonia sputi NBRC 100414]
Length = 295
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRAGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLVGRLRGATILAARRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P GM+G + + V + V+ L
Sbjct: 61 KYLWLDVAAPDGVDRFALVVHLGMSGQMLVARVGAPDHTHLRVR-------------AAL 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGDELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
+ K +K LLDQS ISG+GN ADE L++A+++ + +S+ A LL V
Sbjct: 168 MRGKHTEVKRALLDQSLISGVGNIYADEALWRARLNGARVTDGISRRKLAELLDAATAVM 227
Query: 224 -----------EALGVSLQFYKCYFAKPYVHKKHRENKICRLFKVRLKLMLTAAAFLLNG 272
+AL V++ YF + ++ R + CR R ++ F+ G
Sbjct: 228 SDALAVGGTSFDALYVNVNGQSGYFER-SLNAYGRAGQPCR----RCGTLMRREEFMNRG 282
Query: 273 YF 274
F
Sbjct: 283 SF 284
>gi|417810604|ref|ZP_12457283.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
GJ-24]
gi|335349400|gb|EGM50900.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
GJ-24]
Length = 276
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +I+ ++F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIIN--EETEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ E +++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEMQTAGLAKLGPEPKEETFIIEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEV---REALGVSLQFYK 234
+ ++G+GN ADEVL+ +KIHP A L+KE L IKE+ EA G +++ Y
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTKEEIEVLRDNIIKELALATEAGGTTIRSYT 225
Query: 235 CYF 237
F
Sbjct: 226 DAF 228
>gi|386842772|ref|YP_006247830.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374103073|gb|AEY91957.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451796064|gb|AGF66113.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 286
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V V+ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAETEVLHPRAVRRHVAGADDFAHRLKGHHIGTPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L+ GM+G + ++ + DE K+ + V D
Sbjct: 61 KYLWLPLEETNQSVLAHLGMSGQLLVQ----------PHETADE---KHLRIRVRFADSL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A+IH + + ++ A LL I++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARIHYERPTANFTRPVTAELLGHIRDVMNA 218
>gi|291302738|ref|YP_003514016.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM
44728]
gi|290571958|gb|ADD44923.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM
44728]
Length = 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ IG++I + V +DF A +LG I R+G
Sbjct: 1 MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + I+ D + P + + + +
Sbjct: 61 KFLWLPLDSGDALLCHLGMSGQLLIE-----------PPDKPDGPHLRIRLVFDQAE-HQ 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F ++ + D +P I+ + PD + EF+ L ++ +K LLDQ
Sbjct: 109 LRFVDQRTFGEMLVSPDGAELPGEIAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
S ISG+GN ADE L++A++H + LS L++ I+EV +A
Sbjct: 169 SLISGVGNIYADEALWRARLHGNHPSQELSDAVARELVEHIREVFDA 215
>gi|452822652|gb|EME29669.1| formamidopyrimidine-DNA glycosylase isoform 1 [Galdieria
sulphuraria]
Length = 363
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 43/264 (16%)
Query: 1 MPELPEVEAARRAIEEH-CIGKKIVKSI-IADDNKVI---DGVSASDFEASVLGKAILSA 55
MPEL +VE R+ I+EH + +V++I + D + +S V+ K ++
Sbjct: 1 MPELIQVEYFRQFIQEHLSLDTAVVENIYFSQDASSLFPKGHISMETIPIQVVHKKVIRV 60
Query: 56 HRKGKNLWLRLDSPP-FPSFQFGMTGAI-------YIKGVAVTQYKRSAVKDTDEWPSKY 107
R GK LWL L SP + F FGM+G++ ++ V ++ S ++ EWPS+Y
Sbjct: 61 QRYGKYLWLELSSPVVYIIFHFGMSGSLAHRKTDGSLEFAHVGKHYSSLIQ---EWPSQY 117
Query: 108 SKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKK 167
+K P + I+ LG D +L T+ E D +
Sbjct: 118 AKL-------------------------SPMQLSYITCLGFDPILSNPTIQELYDKIQSY 152
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALG 227
K IK +LL+ S I+GIGNW+ADE+LY++KIHPL+ A LS +L + K+V + G
Sbjct: 153 KSAIKTVLLNGSVIAGIGNWMADEILYKSKIHPLEWACLLSLNDVESLWEATKQVVQQ-G 211
Query: 228 VSLQFYKCYFAKPYV-HKKHRENK 250
V ++ F K ++ H + +++K
Sbjct: 212 VRVRANSDEFPKDWLFHLRWKKDK 235
>gi|423110942|ref|ZP_17098637.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5243]
gi|376377422|gb|EHS90191.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5243]
Length = 269
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +++ P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEDLPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|257081124|ref|ZP_05575485.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol]
gi|256989154|gb|EEU76456.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol]
Length = 280
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHKADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|423126386|ref|ZP_17114065.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5250]
gi|376397958|gb|EHT10588.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5250]
Length = 269
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I ++ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRILSEELSAEKHDHVD-------------LVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELQGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 164 VVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|312872916|ref|ZP_07732976.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2062A-h1]
gi|311091438|gb|EFQ49822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2062A-h1]
Length = 276
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILDIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKKAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|291454393|ref|ZP_06593783.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus
J1074]
gi|359148734|ref|ZP_09181841.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. S4]
gi|421739405|ref|ZP_16177715.1| formamidopyrimidine-DNA glycosylase Fpg [Streptomyces sp. SM8]
gi|291357342|gb|EFE84244.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus
J1074]
gi|406692178|gb|EKC95889.1| formamidopyrimidine-DNA glycosylase Fpg [Streptomyces sp. SM8]
Length = 286
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF + G + R+G
Sbjct: 1 MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL +D PF GM+G + ++ K V+ +F +L G
Sbjct: 61 KYLWLPVDDAPFAVLAHLGMSGQLLVQPGEAPDEKHLRVR---------LRFADDL--GT 109
Query: 119 ELSFTDKRRFAKVRLLN-DPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL F D+R F + L + P +P I+ + D L D F +L +++ T+K LL
Sbjct: 110 ELRFVDQRTFGGLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALL 169
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
DQS ISG+GN ADE L+++++H + +L++ A LL I+ V A
Sbjct: 170 DQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRSAELLTHIRAVMTA 218
>gi|384512571|ref|YP_005707664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF]
gi|430358758|ref|ZP_19425518.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis OG1X]
gi|430366998|ref|ZP_19427711.1| formamidopyrimidine-DNA glycosyllase [Enterococcus faecalis M7]
gi|327534460|gb|AEA93294.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF]
gi|429513583|gb|ELA03162.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis OG1X]
gi|429516812|gb|ELA06288.1| formamidopyrimidine-DNA glycosyllase [Enterococcus faecalis M7]
Length = 280
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|406929845|gb|EKD65330.1| hypothetical protein ACD_50C00117G0012 [uncultured bacterium]
Length = 279
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 32/277 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI------VKSIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE R ++++ +GK I +K I++ D K ++G ++
Sbjct: 1 MPELPEVETIRLGLQKYIVGKTIKDVEVRLKKIVSGDPK------------DIIGAKVVD 48
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L + LD+ + +TG + ++K S K E P+K++ +L
Sbjct: 49 VRRFGKGLVIDLDNGYSITSHIKLTGQFVYRDSKTAKFKISP-KVGKEIPNKFTHVIFKL 107
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
D+G+ + + D R+F ++++ +ELGP+ + +T D+F +++S+ K IK
Sbjct: 108 DNGI-VYYNDVRQFGWIKIIQSSKLKDQSFFNELGPE-FFKDLTFDKFLETISRAKGPIK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGV 228
LL+DQ +SG+GN A++ L+ AKI P ++A +S E L LK +K+ E G
Sbjct: 166 PLLMDQKKMSGVGNIYANDALFDAKIDPRRSAKQISDEEIKKLYNAILKVLKKGLEQGGA 225
Query: 229 SLQFYKCYFAKPYVHKKH-----RENKICRLFKVRLK 260
S Y + ++ H RE + CR+ K ++
Sbjct: 226 SELNYVNVLGQEGGYQNHFLVYGREKEPCRVCKTPIQ 262
>gi|429085551|ref|ZP_19148522.1| Formamidopyrimidine-DNA glycosylase [Cronobacter condimenti 1330]
gi|426545377|emb|CCJ74563.1| Formamidopyrimidine-DNA glycosylase [Cronobacter condimenti 1330]
Length = 269
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D D KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGDYLHDKCVKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|335052626|ref|ZP_08545504.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 409-HC1]
gi|342211729|ref|ZP_08704454.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp.
CC003-HC2]
gi|422495154|ref|ZP_16571443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA1]
gi|313813553|gb|EFS51267.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA1]
gi|333763092|gb|EGL40559.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 409-HC1]
gi|340767273|gb|EGR89798.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp.
CC003-HC2]
Length = 280
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|256847514|ref|ZP_05552960.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis
101-4-CHN]
gi|256716178|gb|EEU31153.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis
101-4-CHN]
Length = 277
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 21/244 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + E G++I+ I + K I+ F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLNEIADGQQII-GIDVNYGKTIEN-DVEGFREALVGQTIEHVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G Q V K++ +G +L
Sbjct: 59 YLLFRF------SNHLTMISHLRMEGSYFKQKTGMPV-------DKHTHVIFHFKNGTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL+ + + + +GP+ + +D F L K + IK LL+Q
Sbjct: 106 CYRDTRKFGRMRLVTTGEEMNYGGLRTIGPEPTEQDFKLDYFERILHKSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFYK 234
S+++G+GN DEVL+ +KI+P Q A +L+ E TL +K I E G ++ YK
Sbjct: 166 SHVAGLGNIYCDEVLWMSKINPEQAANTLTHEQAKTLRENIIKEIATATEHKGTTVHTYK 225
Query: 235 CYFA 238
F
Sbjct: 226 NAFG 229
>gi|50842930|ref|YP_056157.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
KPA171202]
gi|335054136|ref|ZP_08546957.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 434-HC2]
gi|387503829|ref|YP_005945058.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes 6609]
gi|422456220|ref|ZP_16532888.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA1]
gi|50840532|gb|AAT83199.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
KPA171202]
gi|315106731|gb|EFT78707.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA1]
gi|333765501|gb|EGL42850.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 434-HC2]
gi|335277874|gb|AEH29779.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes 6609]
Length = 256
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDV 213
>gi|407796041|ref|ZP_11142997.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salimicrobium sp. MJ3]
gi|407019395|gb|EKE32111.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salimicrobium sp. MJ3]
Length = 274
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+A ++++ + GK+I + + + V FE + G+ + S RKGK
Sbjct: 1 MPELPEVDAVKQSLLKQVTGKRISRVEVFWPSIVKVPEDRKQFEEMLQGQELQSVDRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G +I+ + +E K++ +DG L
Sbjct: 61 FLILHLDDYSLVS-HLRMEGKYFIR-------------NGEEPKDKHTHIIFTFEDGSSL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + + P++ LGPD + T + + L + IK +LLDQ
Sbjct: 107 HYNDVRKFGTMHLFDKGEEYNNKPLNTLGPDPIEGRFTTEYMYEQLQRTTRRIKTILLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSLQFY 233
S ++G GN DE L++A +HP + SL +E+ ++ K I+E EA G +++ Y
Sbjct: 167 SVVAGFGNIYVDETLFRAGVHPERLGSSLDRETVKRIVEEGEKVIREAMEAGGSTIRSY 225
>gi|294615647|ref|ZP_06695502.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636]
gi|425057931|ref|ZP_18461328.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 504]
gi|430825488|ref|ZP_19443692.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0164]
gi|430827617|ref|ZP_19445750.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0269]
gi|430833100|ref|ZP_19451113.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0679]
gi|430838094|ref|ZP_19456044.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0688]
gi|430849691|ref|ZP_19467464.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1185]
gi|430858147|ref|ZP_19475776.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1552]
gi|431146140|ref|ZP_19499037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1620]
gi|431497706|ref|ZP_19514860.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1634]
gi|431746176|ref|ZP_19535010.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2134]
gi|431764106|ref|ZP_19552649.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4215]
gi|291591476|gb|EFF23130.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636]
gi|403039506|gb|EJY50650.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 504]
gi|430445953|gb|ELA55652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0164]
gi|430484477|gb|ELA61492.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0269]
gi|430486555|gb|ELA63391.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0679]
gi|430492374|gb|ELA68788.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0688]
gi|430537442|gb|ELA77785.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1185]
gi|430546099|gb|ELA86065.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1552]
gi|430575680|gb|ELB14377.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1620]
gi|430588641|gb|ELB26833.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1634]
gi|430608945|gb|ELB46151.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2134]
gi|430631291|gb|ELB67613.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4215]
Length = 278
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L + + EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSY 224
>gi|430822523|ref|ZP_19441101.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0120]
gi|430865083|ref|ZP_19480841.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1574]
gi|431743134|ref|ZP_19532015.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2071]
gi|430443100|gb|ELA53097.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0120]
gi|430553161|gb|ELA92862.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1574]
gi|430607498|gb|ELB44818.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2071]
Length = 278
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ + S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETVQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSY 224
>gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417749382|ref|ZP_12397782.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440778452|ref|ZP_20957210.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium avium subsp. paratuberculosis
S5]
gi|81700438|sp|Q73VL9.3|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459094|gb|EGO38043.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436721102|gb|ELP45275.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium avium subsp. paratuberculosis
S5]
Length = 283
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + V ++ R SA+ LDDG
Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAVPRAEHVRISAL----------------LDDG 104
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
LSF D+R F L + D + +P P++ L D L L +K IK
Sbjct: 105 TVLSFADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIK 164
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
LLDQ +SGIGN ADE L++AK+H + A +++ +L EV R+AL
Sbjct: 165 RQLLDQQVVSGIGNIYADEALWRAKVHGARIAATMTGRQLTAVLDAAAEVMRDAL 219
>gi|374621064|ref|ZP_09693598.1| formamidopyrimidine-DNA glycosylase Fpg [gamma proteobacterium
HIMB55]
gi|374304291|gb|EHQ58475.1| formamidopyrimidine-DNA glycosylase Fpg [gamma proteobacterium
HIMB55]
Length = 270
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE H +G+K V S++ D ++ +S SD E + G +L+ R+ K
Sbjct: 1 MPELPEVETTRRGIEPHVVGRK-VTSVMVRDRRLRWPIS-SDLEQRLQGARVLATRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + GM+G++ + VT+ E P K+ + LD G L
Sbjct: 59 YLLIDFQDGSL-LVHLGMSGSLRL----VTE---------KEEPRKHDHVDIGLDSGFLL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D RRF + L+D + + + LGP+ L + D + K+ IK ++D
Sbjct: 105 RYHDPRRFGSMHWLDDASHML-LDHLGPEPLSTDFSADYLYGTSRKRSAPIKHFIMDAKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ A I P + A +SK L+ IK+V
Sbjct: 164 VVGVGNIYANEALFMAGIRPDRAANKISKARYELLVDAIKQV 205
>gi|448821040|ref|YP_007414202.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum ZJ316]
gi|448274537|gb|AGE39056.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum ZJ316]
Length = 274
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + V E K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEDQGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I E+ A+ G ++ +
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMTMAIKGHGTTVHSFS 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
F + ++H RE + C
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC 248
>gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
Length = 274
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + V E K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEDQGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + ++V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEESTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I E+ A+ G ++ +
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
F + ++H RE + C
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC 248
>gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
28-3-CHN]
gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
28-3-CHN]
Length = 279
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + G++I K I + K I+ +F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQI-KGIDVNYGKTIEN-DVEEFRQALIGQTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G Q + V K++ DG +L
Sbjct: 59 YLLFRF------SNDLTMVSHLRMEGSYFNQPTSAEV-------DKHTHVIFHFTDGTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ E D F L K + IK LLDQ
Sbjct: 106 CYRDTRKFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S+++G+GN ADEVL+Q +I+P Q A SL+ + L + I E+ A G ++ +K
Sbjct: 166 SHVAGLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENIIAEIARATAGHGTTVHTFK 225
Query: 235 CYFA 238
F
Sbjct: 226 NAFG 229
>gi|212638360|ref|YP_002314880.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
WK1]
gi|212559840|gb|ACJ32895.1| Formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
WK1]
Length = 273
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 115/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +GK I + + K+I + F + G+ I + R+GK
Sbjct: 1 MPELPEVETVRLTLLPLVVGKTI-ERVKVHWPKIIQHPDVATFCERLKGQTIHNIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G R + D +++ F D EL
Sbjct: 60 FLLFQLDDVVLVS-HLRMEG-------------RYIYEKEDAPFDQHTHIFFTFTDQTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + VPP+S +G + E TV TD L + K TIKA LLDQ
Sbjct: 106 RYRDVRKFGTMHLFSKGEELHVPPLSSIGVEPFDEQFTVAWLTDQLQRTKRTIKATLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ ++G+GN DEVL+++ IHP +TA +L+ L ++ I+E E G +++ Y
Sbjct: 166 TIVAGLGNIYVDEVLFRSSIHPERTAATLTIREIEALHEAIVQTIQEAIEKGGSTVRTY 224
>gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 269
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYLLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|397162898|ref|ZP_10486363.1| formamidopyrimidine-DNA glycosylase [Enterobacter radicincitans DSM
16656]
gi|396095045|gb|EJI92590.1| formamidopyrimidine-DNA glycosylase [Enterobacter radicincitans DSM
16656]
Length = 269
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PHELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNTDYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSRQECEILVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRV 246
>gi|239632071|ref|ZP_04675102.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|417980899|ref|ZP_12621576.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 12A]
gi|417983726|ref|ZP_12624362.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 21/1]
gi|417993231|ref|ZP_12633580.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei CRF28]
gi|417996574|ref|ZP_12636853.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei M36]
gi|418011140|ref|ZP_12650906.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lc-10]
gi|418013193|ref|ZP_12652846.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lpc-37]
gi|239526536|gb|EEQ65537.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|410523835|gb|EKP98754.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 12A]
gi|410527995|gb|EKQ02857.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 21/1]
gi|410531703|gb|EKQ06419.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei CRF28]
gi|410535420|gb|EKQ10045.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei M36]
gi|410552777|gb|EKQ26791.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lc-10]
gi|410556140|gb|EKQ30062.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lpc-37]
Length = 282
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEPT--PSTFDEADFAQRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQ 231
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 232 FY 233
Y
Sbjct: 224 TY 225
>gi|375257988|ref|YP_005017158.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca KCTC 1686]
gi|365907466|gb|AEX02919.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca KCTC 1686]
Length = 269
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|453053099|gb|EMF00569.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 288
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 43/278 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + V ++ A+DF A + G+ + A R+G
Sbjct: 1 MPELPEVEVVRRGLAAWASGRTVASVEVRHPRAVRRHLAGAADFAAQLTGERLGLARRRG 60
Query: 60 KNLWLRLDSPPFPSF--QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD- 116
K LWL L+ P + GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWLPLEGPSGRAVLAHLGMSGQLL-------------VQPEDAPDEKHLRVRLRFDDA 107
Query: 117 -GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLSK 166
G EL F D+R F + L + +VP ++ PD + L+P DE F +L +
Sbjct: 108 AGTELRFVDQRTFGGLSLHD---TVPGSADALPDVISHIARDPLDP-AFDEAAFHAALRR 163
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
++ T+K LLDQS ISG+GN ADE L+++++H + L++ A LL I+EV EA
Sbjct: 164 RRTTVKRALLDQSLISGVGNIYADEALWRSRLHFDRPTAGLTRPRTAELLTHIREVMNEA 223
Query: 226 LG----------VSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 224 LAAGGTSFDSLYVNVNGESGYFDR-SLDAYGREDEPCR 260
>gi|323342140|ref|ZP_08082373.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464565|gb|EFY09758.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 273
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 16/220 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ GK+I SI K+++ S E +++G + HR+GK
Sbjct: 1 MPELPEVETIIRTLEKSLKGKQI-DSINFIYPKLLEDQSEYSLE-NLVGSNFKAFHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LW + + M G ++ D D+ PSK++ + D G +
Sbjct: 59 YLWFEMSNGLHWILHLRMEGKFHLY-------------DYDKAPSKHTHCVINYDGG-TI 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F+++ ++ DP LG + + + + K +K++LLDQS
Sbjct: 105 HYLDTRKFSRMAVVKDPLKYLETKNLGYEPFDSNLNGEYVYQKIHHSKRVMKSILLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
I+GIGN ADE+L++ +IHPL T ++ + C +L++ K
Sbjct: 165 IAGIGNIYADEILFETQIHPLTTGSKITMKQCDSLVETTK 204
>gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380032358|ref|YP_004889349.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
gi|418275034|ref|ZP_12890446.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|38257325|sp|Q88WV4.3|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342241601|emb|CCC78835.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
gi|376009505|gb|EHS82833.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 274
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + V E K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEDQGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I E+ A+ G ++ +
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
F + ++H RE + C
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC 248
>gi|423116944|ref|ZP_17104635.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5245]
gi|376376813|gb|EHS89588.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5245]
Length = 269
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRN-GRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I D K+ + + +G L
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL-------------SGDLPAEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 164 VVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|414583388|ref|ZP_11440528.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1215]
gi|420881011|ref|ZP_15344378.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0304]
gi|420884698|ref|ZP_15348058.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0421]
gi|420891121|ref|ZP_15354468.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0422]
gi|420896292|ref|ZP_15359631.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0708]
gi|420902629|ref|ZP_15365960.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0817]
gi|420907624|ref|ZP_15370942.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1212]
gi|420973083|ref|ZP_15436275.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0921]
gi|421050260|ref|ZP_15513254.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392078381|gb|EIU04208.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0422]
gi|392080461|gb|EIU06287.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0421]
gi|392085920|gb|EIU11745.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0304]
gi|392095604|gb|EIU21399.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0708]
gi|392099990|gb|EIU25784.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0817]
gi|392105528|gb|EIU31314.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1212]
gi|392118540|gb|EIU44308.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1215]
gi|392164634|gb|EIU90322.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0921]
gi|392238863|gb|EIV64356.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense CCUG
48898]
Length = 286
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEVGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L V
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVLDSAAAV 216
>gi|289426426|ref|ZP_06428169.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187]
gi|365963145|ref|YP_004944711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965385|ref|YP_004946950.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974319|ref|YP_004955878.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427395|ref|ZP_16504311.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA1]
gi|422432640|ref|ZP_16509509.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA2]
gi|422434194|ref|ZP_16511054.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA2]
gi|422438645|ref|ZP_16515483.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL092PA1]
gi|422444314|ref|ZP_16521109.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA1]
gi|422446985|ref|ZP_16523723.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA1]
gi|422451395|ref|ZP_16528098.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA2]
gi|422453548|ref|ZP_16530244.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA3]
gi|422491912|ref|ZP_16568222.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL086PA1]
gi|422499380|ref|ZP_16575644.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA2]
gi|422510008|ref|ZP_16586159.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA1]
gi|422516859|ref|ZP_16592967.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA2]
gi|422522646|ref|ZP_16598667.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA2]
gi|422530581|ref|ZP_16606540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA1]
gi|422540323|ref|ZP_16616192.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA1]
gi|422542318|ref|ZP_16618170.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA1]
gi|422544438|ref|ZP_16620276.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA1]
gi|422547213|ref|ZP_16623035.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA3]
gi|422557217|ref|ZP_16632962.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA2]
gi|422563846|ref|ZP_16639518.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA1]
gi|422571261|ref|ZP_16646854.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL067PA1]
gi|422579506|ref|ZP_16655028.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA4]
gi|289153154|gb|EFD01872.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187]
gi|313763648|gb|EFS35012.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA1]
gi|313794041|gb|EFS42065.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA1]
gi|313801429|gb|EFS42680.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA2]
gi|313816826|gb|EFS54540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA1]
gi|313829555|gb|EFS67269.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA2]
gi|313839851|gb|EFS77565.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL086PA1]
gi|314914650|gb|EFS78481.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA4]
gi|314920853|gb|EFS84684.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA3]
gi|314930531|gb|EFS94362.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL067PA1]
gi|314954309|gb|EFS98715.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA1]
gi|314957412|gb|EFT01515.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA1]
gi|314963604|gb|EFT07704.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA1]
gi|314968564|gb|EFT12662.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA1]
gi|315079458|gb|EFT51451.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA2]
gi|315099275|gb|EFT71251.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA2]
gi|315100491|gb|EFT72467.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA1]
gi|315109075|gb|EFT81051.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA2]
gi|327451939|gb|EGE98593.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL092PA1]
gi|327455026|gb|EGF01681.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA3]
gi|327457686|gb|EGF04341.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA2]
gi|328755142|gb|EGF68758.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA1]
gi|328758080|gb|EGF71696.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA2]
gi|365739826|gb|AEW84028.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742066|gb|AEW81760.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744318|gb|AEW79515.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 256
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|284992410|ref|YP_003410964.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM
43160]
gi|284065655|gb|ADB76593.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM
43160]
Length = 292
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 22/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V + A F A++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60
Query: 60 KNLWLRL-DSPPFPSFQ-----FGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L + P+ Q GM+G + ++ K T + F
Sbjct: 61 KYLWLPLAEGDGTPAGQALVAHLGMSGQLLVE------------KPTQPDETHLRARFTF 108
Query: 114 LDDGLELSFTDKRRFAK--VRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKIT 170
D G EL F D+R F V + +VPP ++ + D L EF+ L +++
Sbjct: 109 TDGGRELRFVDQRTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTE 168
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+K LLDQ+ I G+GN ADE L++A++H + L++ LL+ +++V
Sbjct: 169 VKRALLDQTLIGGVGNIYADESLWRARLHGNRPTDRLTRAQVGALLEGVRDV 220
>gi|163790756|ref|ZP_02185182.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7]
gi|159873936|gb|EDP68014.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7]
Length = 279
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ +E+ +G I KS+ +++I G + +++F+ ++G+ I R+G
Sbjct: 1 MPELPEVETVRKGLEKLVLGATI-KSVDVYWDRIIAGSIESTEFKQLLIGEKITGFDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + + + + ++G + V+++ K++ L DG +
Sbjct: 60 KYIVFHFKN-------WALVSHLRMEG-------KYEVEESTVPLKKHTHVVFHLADGRD 105
Query: 120 LSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L L + S+ I LGP+ E F ++L KK IK LLLD
Sbjct: 106 LRYLDVRKFGRMTLVPLGEEYSMTGIRLLGPEPTKEAFDETTFFNTLLTKKRAIKPLLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q ++G+GN DE L+ AKIHPL+ A SL K+ + L +K + + +A G +++ Y
Sbjct: 166 QKIVAGLGNIYVDEALFAAKIHPLRMANSLKKQEVSQLHEAIIKVLGDAVKAGGTTIRTY 225
Query: 234 K 234
+
Sbjct: 226 Q 226
>gi|194702244|gb|ACF85206.1| unknown [Zea mays]
gi|413943563|gb|AFW76212.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 229
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
M+VD F DSL +KKI IKALLLDQS+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC
Sbjct: 1 MSVDSFLDSLGRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNLPRESCEA 60
Query: 215 LLKCIKEV 222
L + I+EV
Sbjct: 61 LHQSIEEV 68
>gi|149912815|ref|ZP_01901349.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b]
gi|149813221|gb|EDM73047.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b]
Length = 283
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 15/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + D + GK +LS R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGAVIAR---ADVNRPDLRWPLPVDMATRLSGKTVLSLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L S GM+G + + G + A P+K+ + +G
Sbjct: 58 KYILADLSSGETLLIHLGMSGRMTVSGDPL-----GAFHHDHPAPAKHDHVVFHMANGAR 112
Query: 120 LSFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L++ P + P +++LGP+ L D+LS + IK+ LLD
Sbjct: 113 ITFNDPRRFGAMDLISTPKADTHPLLAKLGPEPLGNQFDESYLADALSGRNTPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
Q ++G+GN E LY+A+I P + A +LS+ A L+ I++V EA G SL+ +
Sbjct: 173 QRIVAGLGNIYVCEALYRARISPKRRARNLSRARAAALVPIIRDVLRDAIEAGGSSLRDF 232
Query: 234 K 234
+
Sbjct: 233 R 233
>gi|317125434|ref|YP_004099546.1| bifunctional DNA-(apurinic or apyrimidinic site)
lyase/formamidopyrimidine-DNA glycosylase
[Intrasporangium calvum DSM 43043]
gi|315589522|gb|ADU48819.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA
glycosylase [Intrasporangium calvum DSM 43043]
Length = 292
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 27/274 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H +G+ I ++ I V+ D V G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAGPEDLADRVSGTTVTAASRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + +K + K F DDG +
Sbjct: 61 KYLWLVLDGDEALIIHLGMSGQMLVKPADAPREKHCHAA------------FDFADDGPQ 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R F + L T P + + PD + ++ +K LLD
Sbjct: 109 LRFVDQRTFGGLALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLD 168
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EAL 226
QS +SGIGN ADE L++A++H + SL+K + +L +EV +AL
Sbjct: 169 QSLVSGIGNIYADEALWRARVHGERVCASLTKPVLSRVLDHAREVMAEALTQGGTSFDAL 228
Query: 227 GVSLQFYKCYFAKPYVHKKHRENKICRLFKVRLK 260
V++ YF + +H R+ C R++
Sbjct: 229 YVNVNGASGYFDR-SLHAYGRDGTPCDRCGARMR 261
>gi|422548524|ref|ZP_16624336.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA1]
gi|314919237|gb|EFS83068.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA1]
Length = 256
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
3956]
gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
ATCC 14931]
gi|385812535|ref|YP_005848926.1| DNA glycosylase [Lactobacillus fermentum CECT 5716]
gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
3956]
gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
ATCC 14931]
gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716]
Length = 279
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + G++I K I + K I+ +F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQI-KGIDVNYGKTIEN-DVEEFRQALIGQTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G Q + V K++ DG +L
Sbjct: 59 YLLFRF------SNDLTMVSHLRMEGSYFNQPTGAEV-------DKHTHVIFHFTDGTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ E D F L K + IK LLDQ
Sbjct: 106 CYRDTRKFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFYK 234
S+++G+GN ADEVL+Q +I+P Q A SL+ + L + I E+ A G ++ +K
Sbjct: 166 SHVAGLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENIIAEIARATAGHGTTVHTFK 225
Query: 235 CYFA 238
F
Sbjct: 226 NAFG 229
>gi|375088806|ref|ZP_09735144.1| formamidopyrimidine-DNA glycosylase [Dolosigranulum pigrum ATCC
51524]
gi|374561771|gb|EHR33110.1| formamidopyrimidine-DNA glycosylase [Dolosigranulum pigrum ATCC
51524]
Length = 277
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEA +R +++ +GK+ V +I +K+I F+ S++G+ R+GK
Sbjct: 1 MPELPEVEAVKRGLDQSIVGKR-VTAIEVMWSKIIRHDDIEAFKQSLIGQVCQRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D+ S M G ++ D ++ K++ +ELD+ EL
Sbjct: 60 FLLIYFDTHVLLS-HLRMEGKYFLC-------------DKEQPVHKHTHVILELDEQEEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPD---ALLEPMTVDEFTDSLSKKKITIKALL 175
+ D R+F ++ LL P +++LGP+ A P + E+ LS + IK +L
Sbjct: 106 RYHDVRKFGRMELLEIGQEFQHPSLTKLGPEPMPATFSPHVIKEY---LSGRTTAIKNIL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQ 231
LDQ ++GIGN ADE+L+ A +HP +A ++ E L I + +A G +++
Sbjct: 163 LDQRMVAGIGNIYADEILFDAYVHPEMSAAEITDEEIQQLYYSIISIMQAAIKAGGSTIR 222
Query: 232 FYKCYFAK 239
Y F +
Sbjct: 223 SYTNMFGE 230
>gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
clavuligerus ATCC 27064]
gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
clavuligerus ATCC 27064]
Length = 286
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 19/228 (8%)
Query: 4 LPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKGKNL 62
+PEVE RR ++ G+ I + + V ++ A DF A + G ++ A R+GK L
Sbjct: 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60
Query: 63 WLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--GLE 119
WL L D+ GM+G + V+ D K+ + + DD G E
Sbjct: 61 WLPLADTDSSVLGHLGMSGQLL-------------VQPEDAADEKHLRIRISFDDSLGTE 107
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R F + L N P +P I+ + D L D F +L K+ T+K LLD
Sbjct: 108 LRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLD 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
QS ISG+GN ADE L++A++H + SL++ A LL I++V A
Sbjct: 168 QSLISGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNA 215
>gi|425056060|ref|ZP_18459520.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 505]
gi|403032459|gb|EJY44013.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 505]
Length = 278
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLW-TKIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|403718445|ref|ZP_10943321.1| formamidopyrimidine-DNA glycosylase [Kineosphaera limosa NBRC
100340]
gi|403208466|dbj|GAB98004.1| formamidopyrimidine-DNA glycosylase [Kineosphaera limosa NBRC
100340]
Length = 302
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 46/284 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE R + +H +G+ ++ + + + A+D V G + +A R+G
Sbjct: 1 MPELPEVEVVRAGLADHVVGRDLLAATLTGTRVARRHLPGAADLVDRVTGTHVQAARRRG 60
Query: 60 KNLWLRL----DSP--------PFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK 106
K LWL L D P PF GM+G + ++ D +
Sbjct: 61 KYLWLELVRGHDLPVQGSDREAPFALVIHLGMSGQLLVQ-----------APDAPDPKHL 109
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLL------NDPTSVP-PISELGPDALLEPMTVDE 159
+++F EL DG EL F D+R F + L D VP P++ +GPD +
Sbjct: 110 HARF--ELSDGRELRFVDQRTFGGLSLAELLPSKRDGQPVPEPVTHIGPDPFEATFDLPL 167
Query: 160 FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
++ IK LLDQ +SGIGN ADE L++A IH + A L+K + LL
Sbjct: 168 AVRRFKARRSAIKRALLDQQLVSGIGNIYADEALWRAGIHGQRYAEDLTKPALTRLLGHA 227
Query: 220 KEVR-----------EALGVSLQFYKCYFAKPYVHKKHRENKIC 252
++V +AL V++ YF + +H RE + C
Sbjct: 228 RDVMAAALEAGGTSFDALYVNVNGASGYFDR-SLHAYGREGQPC 270
>gi|398780567|ref|ZP_10544896.1| formamidopyrimidine-DNA glycosylase [Streptomyces auratus AGR0001]
gi|396998032|gb|EJJ08966.1| formamidopyrimidine-DNA glycosylase [Streptomyces auratus AGR0001]
Length = 263
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 21/218 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VEA RR ++ C ++ I D V+ GVSA S+ G+ + R+GK
Sbjct: 1 MPELPDVEAFRRVLDS-CARGAPLRRIEVHDEGVLHGVSARRLRRSLEGRRFAAPQRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + P FGMTG + A + + + + D +L
Sbjct: 60 WLLAPTEKGPTLMLHFGMTGQLLCCPPAEALHP-------------HDRVTFTVGDDRQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDE--FTDSLSKKKITIKALLLD 177
+ D+R+ + L ++ +V + E GPDAL TVD F D+LS ++ +K+ LLD
Sbjct: 107 RYRDQRKLKGLWLADESAAVARMMENQGPDAL----TVDRPGFEDALSGRRGGLKSALLD 162
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
QS ++G+GN +ADE+L++AK+HP + +L+ + L
Sbjct: 163 QSVLAGLGNLLADEILWRAKLHPARPVGTLTDQELGRL 200
>gi|430819966|ref|ZP_19438610.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0045]
gi|430871240|ref|ZP_19483663.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1575]
gi|430440169|gb|ELA50446.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0045]
gi|430558197|gb|ELA97624.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1575]
Length = 278
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FE+S++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFESSLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSY 224
>gi|397679994|ref|YP_006521529.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense str.
GO 06]
gi|418247599|ref|ZP_12873985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus 47J26]
gi|420932370|ref|ZP_15395645.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-151-0930]
gi|420942629|ref|ZP_15405885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-153-0915]
gi|420947700|ref|ZP_15410950.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-154-0310]
gi|420952890|ref|ZP_15416132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0626]
gi|420957061|ref|ZP_15420296.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0107]
gi|420963430|ref|ZP_15426654.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-1231]
gi|420998785|ref|ZP_15461920.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-R]
gi|421003307|ref|ZP_15466429.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-S]
gi|353452092|gb|EHC00486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus 47J26]
gi|392137129|gb|EIU62866.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-151-0930]
gi|392147726|gb|EIU73444.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-153-0915]
gi|392151803|gb|EIU77510.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0626]
gi|392154730|gb|EIU80436.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-154-0310]
gi|392177567|gb|EIV03220.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-R]
gi|392192010|gb|EIV17634.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-S]
gi|392246343|gb|EIV71820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-1231]
gi|392250892|gb|EIV76365.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0107]
gi|395458259|gb|AFN63922.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense str.
GO 06]
Length = 286
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIACDPLDELFEVGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL 216
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVL 210
>gi|336322721|ref|YP_004602688.1| DNA-formamidopyrimidine glycosylase [Flexistipes sinusarabici DSM
4947]
gi|336106302|gb|AEI14120.1| DNA-formamidopyrimidine glycosylase [Flexistipes sinusarabici DSM
4947]
Length = 265
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+V + I+ + KKI ++ DD +V+ + + G+ R+GK
Sbjct: 1 MPELPDVTYFKHYIDRVALHKKI-SAVQCDDERVLKNTNCQGLNRILKGEKFAGTKRRGK 59
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + L +S FGMTG I Y+ S K DE KYS+ +E +G
Sbjct: 60 FLIINLANSGKMLILHFGMTGNI--------SYRESEAKTEDE--KKYSQLTIEFHNGSR 109
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
L + +KR V L++ V I E+GPDAL ++ + F LSK ++ IKA L+DQ
Sbjct: 110 LFWINKRLLGSVHLVDKVDEVATIKEMGPDAL--ELSENLFLKLLSKHERKNIKAFLMDQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
S I+G+GN ++E+L+QA I P + L + K ++++ E
Sbjct: 168 SNIAGLGNEYSNELLFQADIDPHRKIKGLGNPERKNIYKVMRDMLE 213
>gi|365968406|ref|YP_004949967.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae EcWSU1]
gi|365747319|gb|AEW71546.1| Formamidopyrimidine-DNA glycosylase [Enterobacter cloacae EcWSU1]
Length = 279
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + SD ++ K ILS R+ K
Sbjct: 11 MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 67
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 68 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 113 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 172
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 173 LVVGVGNIYASESLFAAGIHPDRLASSLSSQECELLVRVIKAV 215
>gi|331701575|ref|YP_004398534.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL
B-30929]
gi|329128918|gb|AEB73471.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL
B-30929]
Length = 280
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 24/228 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G I +S+ K+I+ + +DF+ ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLTQLVKGSTI-QSVDVLYAKMIN-LPPNDFKKALRGKTIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + ++G + V+ D K++ L DG +L
Sbjct: 59 YLLIRL------SDNLTIVSHLRMEG-------KYDVEPEDAPVGKHTHIIFHLTDGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ T V + +GP+ + +TVD K + IK LLDQ
Sbjct: 106 RYNDTRKFGRMNLVDTGTEMQVAGLKTIGPEPTEDDLTVDYMQKIFGKSRKVIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
S I+G+GN ADEVL+ +KI+P Q A +L+ L+ IKE+R+ +
Sbjct: 166 SNIAGLGNIYADEVLWLSKINPQQPANTLT-------LRQIKELRKNI 206
>gi|357401982|ref|YP_004913907.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|386358045|ref|YP_006056291.1| formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337768391|emb|CCB77104.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365808553|gb|AEW96769.1| formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 292
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 25/241 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V A DF + + G + A R+G
Sbjct: 1 MPELPEVEVVRRGLERWISGRTVAEVTVLHPRAVRRHPAGAEDFASRLRGTVLGPARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LWL LD GM+G + ++ + D + + + L D G
Sbjct: 61 KYLWLLLDDGGSLLGHLGMSGQLLVQPL-------------DAPAETHLRVRIRLADDLG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP--------PISELGPDALLEPMTVDEFTDSLSKKKI 169
EL F D+R F + + P P++ + PD L D F +L +++
Sbjct: 108 TELRFVDQRTFGGLSVHPCVPDGPDAAVGLPLPLAHIAPDPLEAAFDEDAFHAALRRRRT 167
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGV 228
TIK LLDQS ISG+GN ADE L+++++H + +L++ A L+ I+EV EAL V
Sbjct: 168 TIKRALLDQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRTAELVGHIREVMNEALAV 227
Query: 229 S 229
Sbjct: 228 G 228
>gi|406575184|ref|ZP_11050894.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Janibacter hoylei PVAS-1]
gi|404555365|gb|EKA60857.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Janibacter hoylei PVAS-1]
Length = 290
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 13/246 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + + V D E + G+ + AHR+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTIETVSLRGERVARRHVPGPRDLEDRLAGRTVTGAHRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-GL 118
K LWL L P G+ + + G + V D D+ ++++ V D G
Sbjct: 61 KYLWLALAEGPDAVPDEGLVVHLGMSGQML-------VTDPDDAEARHTHARVRFTDAGH 113
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
EL F D+R F L + VP I+ + D D + +++ IK +LL+
Sbjct: 114 ELRFVDQRTFGGFALADLVDGVPEGITHIALDPFDPDYDRDVVVRDIKRRRSGIKRVLLN 173
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
Q+ +SGIGN ADE L++A +H + A SL+K + A LL R+ + +L+ F
Sbjct: 174 QTVVSGIGNIYADEALWRAGVHGERLASSLTKPAIARLL---DHARDVMAQALEQGGTSF 230
Query: 238 AKPYVH 243
+ YV+
Sbjct: 231 DELYVN 236
>gi|227551618|ref|ZP_03981667.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257895779|ref|ZP_05675432.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12]
gi|227179295|gb|EEI60267.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257832344|gb|EEV58765.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12]
Length = 278
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFVAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|261341756|ref|ZP_05969614.1| hypothetical protein ENTCAN_08235 [Enterobacter cancerogenus ATCC
35316]
gi|288316124|gb|EFC55062.1| DNA-formamidopyrimidine glycosylase [Enterobacter cancerogenus ATCC
35316]
Length = 269
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSALAHLGPEPLSEAFNADYLRAKCAKKKAPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|367468265|ref|ZP_09468148.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
gi|365816669|gb|EHN11684.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
Length = 281
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I SI DD + S ++ EA++ G+ I+ R+GK
Sbjct: 1 MPELPEVETIRRQLVPLVAGRTIA-SIAIDDPRWCAPQSVAEVEAALTGRRIVGIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ R D + MTG + + D D + Y + + LDD +
Sbjct: 60 HMLWRTDGGTV-AMHLRMTGVLLVD-----------AADDD---APYERVRIVLDDERTV 104
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF R D LGP+ L + +L ++ IK LLLDQ
Sbjct: 105 RFCDPRRFGTGRWFAAADDADRWIDERLGPEPLGDDFDGPALRAALRGRRAPIKGLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
++G+GN ADE L+ A++HPL+ L+ CA L ++
Sbjct: 165 RVVAGVGNIYADEALFHARVHPLRAGGQLTATQCAALADGVR 206
>gi|403510496|ref|YP_006642134.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis alba ATCC
BAA-2165]
gi|402798747|gb|AFR06157.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis alba ATCC
BAA-2165]
Length = 286
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 20/235 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H +G++I + + V+ +DF + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLVDHAVGRRIGDVEVLHPRSIRRHVAGPADFAGRLEGRTPTAVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K +WL LDS GM+G + ++ Q K DE K+ + + L DG E
Sbjct: 61 KYMWLVLDSGEMLLTHLGMSGQMLVQ----PQGK------PDE---KHLRVRLPLADGNE 107
Query: 120 LSFTDKRRFAKVRLLNDP---TSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D+R F + L+++P VP + + D L + F +L K+ +K L
Sbjct: 108 LRFVDQRTFGHL-LVDEPGERVEVPASVDHIALDPLDPEFVPEVFVRALRAKRTEVKRAL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVS 229
LDQS ISG+GN ADE L+++++H ++ L + LL + +V EAL V
Sbjct: 167 LDQSLISGVGNIYADEALWRSRLHWARSTRGLDTAAALELLGHVTDVMSEALEVG 221
>gi|114762146|ref|ZP_01441614.1| formamidopyrimidine-DNA glycosylase [Pelagibaca bermudensis
HTCC2601]
gi|114545170|gb|EAU48173.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. HTCC2601]
Length = 283
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 20/265 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G +I ++ + + + + G IL R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMEGNRIAQAQV--NRPDLRWPFPERMAERLTGARILQLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GMTG + + G A+ ++ V D P K+ +++ DG +
Sbjct: 59 YILGDLDSGETLLIHLGMTGRMLVSGDALGRF----VHD-HPAPEKHDHVVLDMADGARV 113
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T+ P ++ LGP+ L + +L+ + + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLMQTATAEAHPLLAALGPEPLGNAFSESHLVAALAGRNMPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN E LY+ IHP + +S++ A+L+ I+EV E A G SL+ ++
Sbjct: 174 KIVAGLGNIYVCEALYRCGIHPGRRVRRISEKRIASLVPVIREVLEEAIAAGGSSLRDFR 233
Query: 235 ------CYFAKPYVHKKHRENKICR 253
YF + RE + CR
Sbjct: 234 QADGELGYFQHSF-DVYGREGQPCR 257
>gi|441178348|ref|ZP_20970024.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440614521|gb|ELQ77786.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 286
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 29/270 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V + A DF + G+ I A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVRGRTVAEVEVRHPRAVRRHTAGAVDFATRLKGQRIGEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL + GM+G + ++ K ++ F + D G E
Sbjct: 61 KYLWLPVTDGLSVLAHLGMSGQLLVQPQDAPDEKHLRIR-----------FTFDDDAGTE 109
Query: 120 LSFTDKRRFAKVRLLN----DPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L + DP +P I+ + D L F ++L +++ T+K
Sbjct: 110 LRFVDQRTFGGLSLHDAVPGDPEGLPDVIAHIARDPLDPAFDDAAFHEALRRRRTTVKRA 169
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA--------- 225
LLDQS ISG+GN ADE L+++++H + + ++ A LL I++V A
Sbjct: 170 LLDQSLISGVGNIYADEALWRSRLHYDRPTATFTRPRTAELLGHIRDVMSAALAVGGTSF 229
Query: 226 --LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 230 DSLYVNVNGESGYFER-SLDAYGREDEPCR 258
>gi|329767933|ref|ZP_08259445.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341]
gi|328838596|gb|EGF88199.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341]
Length = 286
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 117/239 (48%), Gaps = 29/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV----KSIIADDNKV----IDGVSASDFEASVLGKAI 52
MPELPEVE + +EE I K+I+ +++ + +K+ I + F +V GK I
Sbjct: 1 MPELPEVENIKFGLEEVVINKQILDMKYSNVVTESHKLNKMAIVKQDINYFSENVKGKTI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK----YS 108
R+GK L+ L+ + FGMTGA ++ VKD E +K +
Sbjct: 61 EKLSRRGKYLYFTLNEGYIIT-HFGMTGAFFL------------VKDISEITNKNYFKHQ 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
EL G +L ++D RRF ++R + D T P L P+ + F D L + K
Sbjct: 108 HVIFELSTGEKLIYSDIRRFGELRYIEDVTKFKPFVNLAPEPF-DKKAKKYFLDKLDENK 166
Query: 169 I---TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+IKALLL+ + G GN EVLY+ KIHPL A LSK+ +L K + ++ E
Sbjct: 167 YKDQSIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKESLFKELVDILE 225
>gi|257884460|ref|ZP_05664113.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501]
gi|257887243|ref|ZP_05666896.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733]
gi|293377606|ref|ZP_06623795.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1]
gi|293571801|ref|ZP_06682817.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980]
gi|430841378|ref|ZP_19459297.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1007]
gi|431032968|ref|ZP_19490814.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1590]
gi|431071630|ref|ZP_19494601.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1604]
gi|431106076|ref|ZP_19497233.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1613]
gi|431737601|ref|ZP_19526554.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1972]
gi|431740031|ref|ZP_19528950.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2039]
gi|431751984|ref|ZP_19540670.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2620]
gi|257820298|gb|EEV47446.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501]
gi|257823297|gb|EEV50229.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733]
gi|291608055|gb|EFF37361.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980]
gi|292643606|gb|EFF61727.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1]
gi|430494154|gb|ELA70404.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1007]
gi|430564069|gb|ELB03253.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1590]
gi|430567263|gb|ELB06349.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1604]
gi|430569608|gb|ELB08598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1613]
gi|430598688|gb|ELB36423.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1972]
gi|430604158|gb|ELB41658.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2039]
gi|430614593|gb|ELB51573.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2620]
Length = 278
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|424765987|ref|ZP_18193349.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium TX1337RF]
gi|431585968|ref|ZP_19520483.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1861]
gi|402412994|gb|EJV45345.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium TX1337RF]
gi|430593146|gb|ELB31132.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1861]
Length = 278
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLHPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|312901579|ref|ZP_07760852.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470]
gi|311291374|gb|EFQ69930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470]
Length = 280
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLASFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+ A+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWHAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|422575315|ref|ZP_16650856.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL001PA1]
gi|314923851|gb|EFS87682.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL001PA1]
Length = 280
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P+ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVIHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDV 213
>gi|86608720|ref|YP_477482.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557262|gb|ABD02219.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 279
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 40/289 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R+ ++ +G +I V+ ++A + I + F S++G R+
Sbjct: 1 MPELPEVETVRQDLQRLTLGPRILAVEVLLA---RTIAYPAGEMFGRSLIGTRFTQWQRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAI-YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LDS MTG + +++G S +++ + ++G
Sbjct: 58 GKYLLGSLDSRAVLGVHLRMTGQLLWVQGSTPL--------------SAHTRVRLAFEEG 103
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F ++ L+ +P + LGP+ + F +L K + IKA
Sbjct: 104 WDLRFVDQRTFGQMWLVPAGVELEAVIPTLQTLGPEPFSPAFSEAYFQAALQKSRRLIKA 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVS 229
LLDQS ++G+GN ADE L+ + IHPL AV LS + A L + + EV E G +
Sbjct: 164 ALLDQSLVAGVGNIYADEALFLSGIHPLTPAVQLSDVAKARLREALIEVLRAGLEQRGTT 223
Query: 230 LQFYK-------CYFAKPYVHKKHRENKICRLFKV---RLKLMLTAAAF 268
L+ Y+ Y + +V+ RE CRL R+KL +A F
Sbjct: 224 LRDYRDLRGLNGNYQGQAWVYG--REGDPCRLCGTPIQRMKLAGRSAHF 270
>gi|431762026|ref|ZP_19550588.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3548]
gi|430624718|gb|ELB61368.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3548]
Length = 278
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|346313980|ref|ZP_08855504.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
2_2_44A]
gi|373121806|ref|ZP_09535673.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
21_3]
gi|422330007|ref|ZP_16411031.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
6_1_45]
gi|345907121|gb|EGX76837.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
2_2_44A]
gi|371655098|gb|EHO20454.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
6_1_45]
gi|371664785|gb|EHO29954.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
21_3]
Length = 276
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H + + ++ N +I A+ F ++GK I +R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLDRVMITGCEVFWNNIIGYPDAATFCRDIVGKTIQGYYRHGK 59
Query: 61 NLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++R D M G Y V+ E K+ ++L DG +
Sbjct: 60 --YMRFDLGDMEWICHMRMEGKFY-------------VQQPQEPYDKHVHVILQLSDGRQ 104
Query: 120 LSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F K+ L D +S P +G DA E +T + +L KKK +KA+LL
Sbjct: 105 LRYHDTRKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ YI+GIGN ADE+ + +HP L K+ L+ I+ +
Sbjct: 165 DQRYIAGIGNIYADEICFAMHMHPETMINHLRKKDFEELIYHIRRI 210
>gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 295
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 15/239 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++++ G +I + I ++ +S DF+ SV+ I R+GK
Sbjct: 1 MPELPEVETIKKSLLSDLTGDRISRVEIYFPG-MLQNMSPEDFKESVISNQIKDVKRRGK 59
Query: 61 NLWLRL-------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS--KFF 111
L + + D MTG + +K V K D +E +Y +
Sbjct: 60 YLLIYVSCNGKMKDQVKVIIIHLRMTGRLILKNNEVE--KSHNHLDDEEIIQEYRHLRCL 117
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKI 169
+L G+ L F D+R+F + L+N ++ LGP+ L E ++F + K K
Sbjct: 118 FQLQSGITLEFHDQRKFGTMALVNQGEEFYWKGLANLGPEPLSEEFDYEDFYKGVKKSKK 177
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGV 228
IK +LLDQ ++GIGN ADEVL+ + IHP + L+++ +L K I ++ E LG+
Sbjct: 178 PIKGILLDQKLVAGIGNIYADEVLFASGIHPARKGEELTEQEVGSLYKTIIQILE-LGI 235
>gi|357010981|ref|ZP_09075980.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus elgii B69]
Length = 287
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + I KKI + + + F + G++I S R+GK
Sbjct: 1 MPELPEVETVRRTLNQLVIDKKIERVSVLLPRIIQHPDDIQAFAVMLEGESIRSVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD ++ + + ++G R V +DE K++ DG EL
Sbjct: 61 FLRFMLD-------RYTLVSHLRMEG-------RYGVYRSDEPMEKHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+ +LG + L E T + F + K+K IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHVYPKDRDLLEAPLKKLGLEPLDEAFTPEAFRTKIGKRKTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
YI GIGN DE L+ A IHP + A +LS A L ++ +K+ A G S++ Y
Sbjct: 167 EYIVGIGNIYVDEALFLAGIHPEREAHTLSAAETAKLHEAIVETLKDAVAAGGSSIKSY 225
>gi|421730687|ref|ZP_16169813.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407074841|gb|EKE47828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
M27]
Length = 276
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T D + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEERIALPLSQLGPEPDDEAFTADYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|282891369|ref|ZP_06299871.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174999|ref|YP_004651809.1| formamidopyrimidine-DNA glycosylase [Parachlamydia acanthamoebae
UV-7]
gi|281498866|gb|EFB41183.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479357|emb|CCB85955.1| formamidopyrimidine-DNA glycosylase [Parachlamydia acanthamoebae
UV-7]
Length = 275
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 1 MPELPEVEAARRAIEEHCI-GKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R + E + G+ I K+ I + + I S S F ++G+ IL+ R+G
Sbjct: 1 MPELPEVETITREMREAKLEGRTIEKAQIFWE-RTIATPSPSIFSKKIVGQKILNISRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L L MTG I A Q K P + + + LDDG
Sbjct: 60 KFIILTLSKESL-LIHLRMTGKFLI---AKEQIK----------PDSHERVRLFLDDGRI 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L + D+R+F K L+ +P V + LG + L E T+ F L+ IK LLDQ
Sbjct: 106 LRYEDQRKFGKWYLVKNPDEV--LGALGIEPLSENFTLSTFQKILTGHHRQIKPFLLDQH 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
YI+G+GN DE L+ +KIHPL++ +L+K K IK + EA+ + LQ
Sbjct: 164 YIAGLGNIYVDEALWVSKIHPLRSVSTLTK-------KEIKALHEAIPIVLQ 208
>gi|69246665|ref|ZP_00604055.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO]
gi|257878418|ref|ZP_05658071.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933]
gi|257882836|ref|ZP_05662489.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502]
gi|257889383|ref|ZP_05669036.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410]
gi|257894396|ref|ZP_05674049.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408]
gi|260560007|ref|ZP_05832185.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68]
gi|293559953|ref|ZP_06676461.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162]
gi|294623285|ref|ZP_06702150.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317]
gi|314937781|ref|ZP_07845098.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a04]
gi|314941673|ref|ZP_07848553.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C]
gi|314948921|ref|ZP_07852290.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082]
gi|314950961|ref|ZP_07854028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A]
gi|314992963|ref|ZP_07858359.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B]
gi|314996410|ref|ZP_07861453.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a01]
gi|383328867|ref|YP_005354751.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium Aus0004]
gi|389868744|ref|YP_006376167.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium DO]
gi|424792400|ref|ZP_18218637.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium V689]
gi|424802661|ref|ZP_18228138.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium S447]
gi|424834915|ref|ZP_18259600.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R501]
gi|424859603|ref|ZP_18283594.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R499]
gi|424869097|ref|ZP_18292820.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R497]
gi|424950747|ref|ZP_18365896.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R496]
gi|424953548|ref|ZP_18368500.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R494]
gi|424955613|ref|ZP_18370439.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R446]
gi|424960443|ref|ZP_18374958.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1986]
gi|424963162|ref|ZP_18377426.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1190]
gi|424967007|ref|ZP_18380748.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1140]
gi|424970234|ref|ZP_18383761.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1139]
gi|424973187|ref|ZP_18386476.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1137]
gi|424977743|ref|ZP_18390729.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1123]
gi|424980148|ref|ZP_18392962.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV99]
gi|424985183|ref|ZP_18397675.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV69]
gi|424987168|ref|ZP_18399557.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV38]
gi|424990263|ref|ZP_18402480.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV26]
gi|424995067|ref|ZP_18406965.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV168]
gi|424996915|ref|ZP_18408699.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV165]
gi|425000769|ref|ZP_18412317.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV161]
gi|425005271|ref|ZP_18416529.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV102]
gi|425006564|ref|ZP_18417736.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV1]
gi|425012304|ref|ZP_18423128.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E422]
gi|425015069|ref|ZP_18425710.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E417]
gi|425016753|ref|ZP_18427298.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C621]
gi|425019801|ref|ZP_18430141.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C497]
gi|425027913|ref|ZP_18435165.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C1904]
gi|425032067|ref|ZP_18437155.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 515]
gi|425034753|ref|ZP_18439620.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 514]
gi|425038456|ref|ZP_18443072.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 513]
gi|425041836|ref|ZP_18446216.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 511]
gi|425045984|ref|ZP_18450040.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 510]
gi|425050291|ref|ZP_18454053.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 509]
gi|425051334|ref|ZP_18455003.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 506]
gi|425060975|ref|ZP_18464241.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 503]
gi|430830709|ref|ZP_19448765.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0333]
gi|430846044|ref|ZP_19463909.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1133]
gi|430854809|ref|ZP_19472521.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1392]
gi|431541896|ref|ZP_19518125.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1731]
gi|431750123|ref|ZP_19538850.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2297]
gi|431754812|ref|ZP_19543472.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2883]
gi|431767187|ref|ZP_19555642.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1321]
gi|431770809|ref|ZP_19559206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1644]
gi|431772267|ref|ZP_19560609.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2369]
gi|431775793|ref|ZP_19564063.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2560]
gi|431778778|ref|ZP_19566984.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4389]
gi|431781906|ref|ZP_19570046.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6012]
gi|431785717|ref|ZP_19573740.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6045]
gi|68195139|gb|EAN09597.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO]
gi|257812646|gb|EEV41404.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933]
gi|257818494|gb|EEV45822.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502]
gi|257825743|gb|EEV52369.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410]
gi|257830775|gb|EEV57382.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408]
gi|260073842|gb|EEW62166.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68]
gi|291597313|gb|EFF28499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317]
gi|291606041|gb|EFF35467.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162]
gi|313589392|gb|EFR68237.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a01]
gi|313592486|gb|EFR71331.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B]
gi|313596816|gb|EFR75661.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A]
gi|313599564|gb|EFR78407.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C]
gi|313642812|gb|EFS07392.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a04]
gi|313644711|gb|EFS09291.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082]
gi|378938561|gb|AFC63633.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium Aus0004]
gi|388533993|gb|AFK59185.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium DO]
gi|402917679|gb|EJX38433.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium V689]
gi|402919380|gb|EJX39986.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium S447]
gi|402921850|gb|EJX42269.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R501]
gi|402926266|gb|EJX46317.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R499]
gi|402932545|gb|EJX52044.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R496]
gi|402936152|gb|EJX55350.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R497]
gi|402938753|gb|EJX57734.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R494]
gi|402947721|gb|EJX65913.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1986]
gi|402948262|gb|EJX66415.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R446]
gi|402950164|gb|EJX68176.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1190]
gi|402955274|gb|EJX72816.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1140]
gi|402959226|gb|EJX76500.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1137]
gi|402962325|gb|EJX79278.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1139]
gi|402964612|gb|EJX81382.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1123]
gi|402966601|gb|EJX83221.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV69]
gi|402967249|gb|EJX83821.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV99]
gi|402974988|gb|EJX90980.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV38]
gi|402978280|gb|EJX94035.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV168]
gi|402979839|gb|EJX95486.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV26]
gi|402986674|gb|EJY01786.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV102]
gi|402987449|gb|EJY02511.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV165]
gi|402988507|gb|EJY03510.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV161]
gi|402993761|gb|EJY08349.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E422]
gi|402996846|gb|EJY11207.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E417]
gi|402997096|gb|EJY11446.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV1]
gi|403004985|gb|EJY18736.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C1904]
gi|403006193|gb|EJY19857.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C621]
gi|403010746|gb|EJY24097.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C497]
gi|403014047|gb|EJY27067.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 515]
gi|403019436|gb|EJY32039.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 514]
gi|403019561|gb|EJY32157.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 513]
gi|403024237|gb|EJY36411.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 509]
gi|403025335|gb|EJY37421.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 511]
gi|403025869|gb|EJY37913.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 510]
gi|403037856|gb|EJY49107.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 506]
gi|403042083|gb|EJY53058.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 503]
gi|430482298|gb|ELA59416.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0333]
gi|430539864|gb|ELA80103.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1133]
gi|430547688|gb|ELA87604.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1392]
gi|430592943|gb|ELB30930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1731]
gi|430610596|gb|ELB47740.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2297]
gi|430618640|gb|ELB55481.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2883]
gi|430631195|gb|ELB67518.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1321]
gi|430634700|gb|ELB70814.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1644]
gi|430638131|gb|ELB74108.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2369]
gi|430642441|gb|ELB78219.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2560]
gi|430643439|gb|ELB79178.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4389]
gi|430646876|gb|ELB82337.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6045]
gi|430648307|gb|ELB83714.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6012]
Length = 278
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S +++ Q+ + K++ +DG +L
Sbjct: 60 FLIFHLDHCELIS---------HLRMEGKYQFTKENTPI-----DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSY 224
>gi|386852251|ref|YP_006270264.1| formamidopyrimidine-DNA glycosylase [Actinoplanes sp. SE50/110]
gi|359839755|gb|AEV88196.1| formamidopyrimidine-DNA glycosylase [Actinoplanes sp. SE50/110]
Length = 285
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE R + + G+ + + + + + F A + G+ IL R+G
Sbjct: 1 MPELPEVETVRMGLAKWVTGRTVSAVEVHHPRAIRRHLPGDTHFIAMLTGRTILDVARRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ K V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAIIAHLGMSGQLLMQPGTADDEKHLRVR------------FRFTDDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P IS + D + D F+ L + +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGADLPAEISHIARDPIDPLFDDDAFSARLRGRHTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
S ISG+GN ADE L++A++H + LS+ + A LL + VR+ LG ++ F
Sbjct: 169 SLISGVGNIYADEALWRARLHGTRPTDKLSRPAVARLL---QHVRDVLGEAIVAGGTSFD 225
Query: 239 KPYVH 243
+ YV+
Sbjct: 226 ELYVN 230
>gi|345023450|ref|ZP_08787063.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Ornithinibacillus scapharcae TW25]
Length = 275
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ + + I + N + F+ ++G+ I RKGK
Sbjct: 1 MPELPEVETIRKTLKRFVLNRTINDVNVYWGNIIKKPDDTEHFKQLLIGQTIHDIKRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G YK VK K++ EL
Sbjct: 61 FLLFELDD-------YTLISHLRMEGKYSVHYKDEPVK-------KHTHVIFSFTTDEEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + ++N + P+ +LGPD + T+D F L +IKA+LLDQ
Sbjct: 107 RYNDVRKFGTMHIVNKGEELIQKPLDQLGPDPFDKEFTLDYFYKRLKTTNRSIKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK----CIKEVREALGVSLQFY 233
+ ++G+GN DE L++A+IHPL+ + L+K+ + K ++E E G +++ Y
Sbjct: 167 TVVAGLGNIYVDETLFKARIHPLKKSNKLTKKEVQEIRKQAILTLEEAVEQGGTTIRSY 225
>gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
UCC118]
gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
11741]
gi|122449230|sp|Q1WUN7.1|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
UCC118]
gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
11741]
Length = 276
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +++ S+F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVN--EESEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ + V++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEV---REALGVSLQFYK 234
+ ++G+GN ADEVL+ +KIHP A L++E L IKE+ EA G +++ Y
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKELALATEAGGTTIRSYT 225
Query: 235 CYF 237
F
Sbjct: 226 DAF 228
>gi|257898349|ref|ZP_05678002.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15]
gi|257836261|gb|EEV61335.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15]
Length = 278
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPLFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLCPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|46446526|ref|YP_007891.1| formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697648|sp|Q6MCT3.3|FPG_PARUW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|46400167|emb|CAF23616.1| putative formamidopyrimidine-DNA glycosidase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 276
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEE-HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEV + +++ IGKKI+ + I K + + F V G++I + R+G
Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWP-KTLAVPTPEIFCQQVQGQSIQNVDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +L + F MTG R + S Y + ++G +
Sbjct: 60 KYIIFQLSNQMFLIVHLRMTG-------------RFQFVTSQTPASPYVRIQFNFENGDQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F D R+F + L++D + I LGP+ LL T + F D + +K +K+LLLDQS
Sbjct: 107 LRFHDTRKFGRWYLVSDVEEI--IGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+I G+GN DE L++AK+HPL A ++ + L IK V E
Sbjct: 165 FIVGLGNIYVDEALWEAKLHPLIPANQINLKHLKILYHSIKYVLE 209
>gi|414153053|ref|ZP_11409380.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455435|emb|CCO07282.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 277
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R +EE G ++ + +VI F + GK R+G
Sbjct: 1 MPELPEVETVVRTLEEKLCGL-VITDVELFKPEVIRFPKPDQFIEQITGKQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L MTG R + D+ K++ L +G
Sbjct: 60 KYLLLHLSDHLTLVVHLRMTG-------------RLVYCEADQPLIKHTHVIFRLSNGKH 106
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L + + +P I +LGP+ L + T + F L +++ IK LLLD
Sbjct: 107 LRFADTRRFGRLLLTSTEEVYGLPGIRDLGPEPLDQEFTREFFKKELRRRRSRIKPLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +++G+GN ADE L++AKIHP + A LS A L + I EV
Sbjct: 167 QCFMAGLGNIYADEALFRAKIHPERLAPELSSREVANLHRAIVEV 211
>gi|225181343|ref|ZP_03734787.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT
1]
gi|225167924|gb|EEG76731.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT
1]
Length = 274
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 26/243 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ G+ I + D +A+D + GK + R+GK
Sbjct: 1 MPELPEVETIRCGLEQVLPGRVFAAVEIGYGGSIKD-PAAADVMTRLPGKRVTGTGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + LD MTG ++ +G AVT K++ DG
Sbjct: 60 YLQIFLDDDSVLVIHLRMTGQLVFNEGAAVT--------------DKHTHVVFSFTDGST 105
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L+F+D R+F + + P S + ++ LGP+ L + K+ +TIKALL
Sbjct: 106 LAFSDIRKFGTIWWV--PISRLDHIKGLATLGPEPLSADFHFSYLNREVEKRTVTIKALL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQ 231
L+Q +++G+GN ADE+L++A+I P + A SLS++ L I+EV E G S+
Sbjct: 164 LNQQFLAGLGNIYADEILHRAQILPQRKARSLSRQERQHLFSAIREVLAEAIECRGTSMS 223
Query: 232 FYK 234
Y+
Sbjct: 224 DYR 226
>gi|72161056|ref|YP_288713.1| formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX]
gi|90101321|sp|Q47S77.3|FPG_THEFY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|71914788|gb|AAZ54690.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Thermobifida fusca YX]
Length = 296
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ +G + + V A+DF A V G + A R+G
Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LDS GM+G + + + A ++ R + T ++ + +
Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAERHLRVRLPLT-------ARQGHDPEAP 113
Query: 118 LELSFTDKRRFAKV---RLLNDPTS--VPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
EL F D+R F + RL++D T +P IS + D L D F +L +K+ +
Sbjct: 114 QELRFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTEL 173
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQS ISGIGN ADE L+ +++H +LS+ ATLL ++EV
Sbjct: 174 KRALLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQVATLLAAVREV 224
>gi|295706847|ref|YP_003599922.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319]
gi|294804506|gb|ADF41572.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319]
Length = 277
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK I + + N + F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD + M + ++G + A+ + E P K+ F DG EL
Sbjct: 61 FLKIVLDD-------YTMVSHLRMEG-------KYALHENAEEPDKHVHVFFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + PP+ LGP+ E + + K IK +LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ + G+GN DE L++A IHP + A L+ E L K I
Sbjct: 167 NVVVGLGNIYVDEALFRAGIHPERVASQLTDEEYEKLYKEI 207
>gi|431756800|ref|ZP_19545432.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3083]
gi|430620654|gb|ELB57456.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3083]
Length = 278
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAVGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L I +V EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSY 224
>gi|227530467|ref|ZP_03960516.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus vaginalis ATCC 49540]
gi|227349572|gb|EEJ39863.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus vaginalis ATCC 49540]
Length = 280
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 21/244 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+KI I K I F S++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAGRKI-NGIDVHYGKTITN-DVEQFRQSLIGQTIETVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G+ Y + V D K++ + DG EL
Sbjct: 59 YLLFRFSNHLTMVSHLRMEGSYYTQPV-------------DAPIDKHTHVVFKFTDGTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D +V + +GP+ +D F L + + IK LL+Q
Sbjct: 106 CYRDTRKFGRMTLVKTGDEMTVGGLKTIGPEPTAADFKIDYFKRILQRSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQFYK 234
+I+G+GN DEVL+ +KI+P Q A +L+ + TL I+E+ A+ G ++ +K
Sbjct: 166 RHIAGLGNIYVDEVLWMSKINPEQPANTLTDKQIQTLHDNIIQELSRAIEYKGTTVHTFK 225
Query: 235 CYFA 238
F
Sbjct: 226 NAFG 229
>gi|335357477|ref|ZP_08549347.1| formamidopyrimidine-DNA glycosylase [Lactobacillus animalis KCTC
3501]
Length = 276
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 23/246 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +++ +G+KI + + ++ A DF+A + + + R+GK
Sbjct: 1 MPELPEVETVRRGLQKLVLGQKIARVEVLYPKMIVG--DADDFKAKLTEQTLEKIERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G Y VK+ + K++ +L DG +L
Sbjct: 59 YLLFRFTNGLTVVSHLRMEGKFY-------------VKEATDPVDKHTHVIFDLADGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +P +++LGP+ + E V +F L KKK IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVQTGSEEKLPGLAKLGPEPVAETFKVADFYQKLQKKKKNIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL--KCIKEVREAL---GVSLQFY 233
+ ++G+GN DEVL+Q+KIHP + L+ + AT+L I E+ +A+ G +++ Y
Sbjct: 166 TLVTGLGNIYVDEVLWQSKIHPETSCQKLTLDQ-ATILHDNIITELAKAIKAGGTTIRSY 224
Query: 234 KCYFAK 239
F K
Sbjct: 225 TDAFQK 230
>gi|300788843|ref|YP_003769134.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
U32]
gi|384152309|ref|YP_005535125.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|399540724|ref|YP_006553386.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|299798357|gb|ADJ48732.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
U32]
gi|340530463|gb|AEK45668.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|398321494|gb|AFO80441.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
Length = 257
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 21/236 (8%)
Query: 19 IGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRL---DSPPFPSF- 74
+G+KI +S+ D+ V + D ++ G + AHR+GK LW D P P+
Sbjct: 12 LGRKI-RSVDDHDDWVCRPHAPGDIATALRGGRLTEAHRRGKTLWCETEGGDGRPGPNLG 70
Query: 75 -QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRL 133
GM G + G + + ++D DE P ++ +F + DG +L D RR ++VRL
Sbjct: 71 LHLGMAGQLRFAGESGPPGR---IRDRDEKP-EWFRFGITFADGEQLRLFDTRRLSRVRL 126
Query: 134 LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVL 193
P + LGPDA ++ +F + + + + +KA LLDQS ++GIGN +ADE L
Sbjct: 127 ------DPDLDALGPDA--GEISRRDFAERVGRGRAPLKARLLDQSVVAGIGNLLADETL 178
Query: 194 YQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKPYVHKKHREN 249
+QA + P + +S + L K + R+AL +++ + + H++ E+
Sbjct: 179 WQAALSPARPVHEMSSDDLGHLHKAL---RKALRAAIRHGGVHTGEIIGHRRAGEH 231
>gi|374606088|ref|ZP_09678985.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus dendritiformis C454]
gi|374388315|gb|EHQ59740.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus dendritiformis C454]
Length = 280
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + GK I + + + + +F ++ G I R+GK
Sbjct: 1 MPELPEVETVKRTLNTLVAGKTIERVTVTLPRIIQRPANIEEFCDALSGHTIEQVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD G+T +++ R V E K++ L DG EL
Sbjct: 61 FLRILLD---------GLTLVSHLR-----MEGRYGVFKAGEPVEKHTHVIFHLTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ++ +PP+ +LG + L E T + T L K++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFRRDEEWGMPPLQKLGVEPLSEQFTPEVLTALLRKRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
+ GIGN DE L++A IHPL+ A L+ C L + I E EA G S++ Y
Sbjct: 167 HVVVGIGNIYVDEALFRAGIHPLRPADELTDAECVRLHEAIIATLSEAVEAGGSSIKSY 225
>gi|257086218|ref|ZP_05580579.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6]
gi|422722809|ref|ZP_16779358.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137]
gi|424671007|ref|ZP_18108022.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis 599]
gi|256994248|gb|EEU81550.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6]
gi|315027065|gb|EFT38997.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137]
gi|402359567|gb|EJU94192.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis 599]
Length = 280
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLSGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+ A+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWHAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|345297295|ref|YP_004826653.1| Formamidopyrimidine-DNA glycosylase [Enterobacter asburiae LF7a]
gi|345091232|gb|AEN62868.1| Formamidopyrimidine-DNA glycosylase [Enterobacter asburiae LF7a]
Length = 269
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSDAFNADYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSPQECELLVRVIKAV 205
>gi|406900324|gb|EKD43325.1| Formamidopyrimidine-DNA glycosylase [uncultured bacterium]
Length = 289
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ G+KI KSI K + S SDF ++ R+GK
Sbjct: 1 MPELPEVETIRRDLEKKIAGEKI-KSIEILAAKSVHNKS-SDFLKILIVNNFKHIERRGK 58
Query: 61 NLWLRLDSPPFPSF---QFGMTGAI---YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L LD ++ MTG + + K + + ++A+ DT P+K+++
Sbjct: 59 LLMFALDKVGKYAYLLVHLKMTGQLIYRHKKQILAGGHSQNAM-DTI-VPNKFTRVIFTF 116
Query: 115 DDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L F D RRF ++L++ + I+ G + L T++ F K++I IKA
Sbjct: 117 GDGGQLFFNDLRRFGYLKLVSKEEKEKIVINSFGIEPLTPDYTLEAFQKLFKKRQINIKA 176
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLL+Q ISGIGN ADEV + AKI P + SLS L CI++V
Sbjct: 177 LLLNQKLISGIGNIYADEVCFCAKILPTRKVGSLSGLEIKKLFYCIEDV 225
>gi|397660615|ref|YP_006501317.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca E718]
gi|394348619|gb|AFN34740.1| Formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca E718]
Length = 269
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + + S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVFSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV 205
>gi|302342357|ref|YP_003806886.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM
2075]
gi|301638970|gb|ADK84292.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM
2075]
Length = 272
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 36/232 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E +G+ IV K+++ D DG+ GK+I
Sbjct: 1 MPELPEVECVRRTLEPAVLGRAIVAVQINYAKAVLPDARAFADGLG---------GKSIT 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFV 112
+ R GK L L LD F + MTG + + D+ P + + +
Sbjct: 52 ATARHGKLLILGLDQGAFMTIHLRMTGQVIV---------------ADQAPQADHIHARI 96
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKIT 170
+LDDG L + D R+F ++ D ++ P++ +GPDAL + + F + +
Sbjct: 97 DLDDGQSLFYRDMRKFGRLNYCPDAQALQNGPLANMGPDAL--ELEAEAFATLVGARGGK 154
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+K +LLDQ ++G+GN ADE L++A + PL +LS + L + +++
Sbjct: 155 LKNVLLDQRVLAGVGNIYADESLHRAGLSPLADPRALSADDLDRLHRALRQT 206
>gi|162147553|ref|YP_001602014.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545659|ref|YP_002277888.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044595|sp|A9HI30.1|FPG_GLUDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|161786130|emb|CAP55712.1| putative formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533336|gb|ACI53273.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 286
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 23/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + H GK I + +A + +D A + G I R+ K
Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIAR--VAVRRADLRFPFPADLVARLEGATITGFARRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RLD+ GM+G + + ++ P ++ FF E DG
Sbjct: 59 YILIRLDTGDTLLLHLGMSGRVLL-----------SLPGDAPVPDRHEHFFFETTDGTRC 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPP----ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
D RRF V L+ PT+ ++ LGP+ L + + L++++ +IKA LL
Sbjct: 108 GLIDPRRFGAVDLM--PTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALL 165
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQF 232
DQ+ ++G+GN E L++A IHP + A +L A L++ I+ V REA+ G SL+
Sbjct: 166 DQTVVAGLGNIYVSEALFRAGIHPARLACTLDAAEDARLVQAIRAVLREAIAAGGSSLRD 225
Query: 233 Y 233
Y
Sbjct: 226 Y 226
>gi|313899426|ref|ZP_07832936.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2]
gi|312955714|gb|EFR37372.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2]
Length = 276
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H + + ++ N +I A+ F ++GK I +R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLDRVMITGCEVFWNNIIGYPDAAIFCRDIVGKTIQGYYRHGK 59
Query: 61 NLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++R D M G Y V+ E K+ ++L DG +
Sbjct: 60 --YMRFDLGDMEWICHMRMEGKFY-------------VQQPQEPYDKHVHVILQLSDGRQ 104
Query: 120 LSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F K+ L D +S P +G DA E +T + +L KKK +KA+LL
Sbjct: 105 LRYHDTRKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ YI+GIGN ADE+ + +HP L K+ L+ I+ +
Sbjct: 165 DQRYIAGIGNIYADEICFAMHMHPETMINHLRKKDFEELIYHIRRI 210
>gi|256957262|ref|ZP_05561433.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5]
gi|257077764|ref|ZP_05572125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1]
gi|294781290|ref|ZP_06746636.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1]
gi|307267955|ref|ZP_07549343.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248]
gi|422696553|ref|ZP_16754510.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346]
gi|422711660|ref|ZP_16768587.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027]
gi|422720356|ref|ZP_16776974.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017]
gi|422729867|ref|ZP_16786262.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012]
gi|422866952|ref|ZP_16913556.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467]
gi|256947758|gb|EEU64390.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5]
gi|256985794|gb|EEU73096.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1]
gi|294451626|gb|EFG20082.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1]
gi|306515596|gb|EFM84123.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248]
gi|315032492|gb|EFT44424.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017]
gi|315034274|gb|EFT46206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027]
gi|315149640|gb|EFT93656.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012]
gi|315174877|gb|EFU18894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346]
gi|329577870|gb|EGG59291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467]
Length = 280
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL A L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVAKLYQAIIDVLARAVEAGGTTIRTY 224
>gi|374710135|ref|ZP_09714569.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Sporolactobacillus inulinus CASD]
Length = 279
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 20/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE +R + + +GK VK + K+I + F+ +++G+ I R+G
Sbjct: 1 MPELPEVETVKRTLSQLVLGK-TVKEVEVRWPKIIRRPDDLNQFKHALIGQTIHDIKRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGL 118
K L D F + + ++G +Y+ D + P+ KY+ D
Sbjct: 60 KFLLFCFDD-------FVLVSHLRMEG----RYRL----DPEHAPTDKYTHVIFHFTDDT 104
Query: 119 ELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + L N + PP+++LGP+ L + +TVD T + S+ +IK +LL
Sbjct: 105 ALRYRDVRKFGTMHLFNKGEEWQHPPLAKLGPEPLSKALTVDYLTTAFSRTSRSIKQVLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
DQ+ + G+GN DE L++A IHPL A SLS E L +
Sbjct: 165 DQTVVVGLGNIYVDESLFKAGIHPLTPASSLSAEQLEQLHHAV 207
>gi|443672937|ref|ZP_21138013.1| Formamidopyrimidine-DNA glycosylase [Rhodococcus sp. AW25M09]
gi|443414422|emb|CCQ16351.1| Formamidopyrimidine-DNA glycosylase [Rhodococcus sp. AW25M09]
Length = 272
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE AR+ +E+ +G+ IV AD + + + ++ G + A R+GK
Sbjct: 1 MPELPEVENARQVVEK-ALGRVIVDIDDADTFECRPHMPG-EIAHALKGGQLTEACRRGK 58
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD--TDEWPS---KYSKF 110
+W S P GM G + + R D E P+ ++++F
Sbjct: 59 AMWCETVTADGSSGPTLGIHLGMGGRVIVTAPDGDSTSRYGGGDPHVGERPTDKPEWTRF 118
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ DDG +L DKRR +VRL P I LGPDA +T DEF +
Sbjct: 119 SMTFDDGGQLRLFDKRRLGRVRL------EPDIDALGPDAA--EITRDEFRHRIGSSAAP 170
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
+KA LLDQ+ I+G+GN +ADEVL+Q++ P + A +L+ E
Sbjct: 171 LKARLLDQAAIAGVGNLLADEVLWQSEQAPSRRAKTLTTE 210
>gi|126734088|ref|ZP_01749835.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2]
gi|126716954|gb|EBA13818.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2]
Length = 283
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE + I G I + AD N+ + + + GK +L R+
Sbjct: 1 MPELPEVETVKAGIAPVMEGHVIAQ---ADVNRPDLRWPFPAQMAKRLTGKRVLGLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + I G V ++ P+K+ +DDG
Sbjct: 58 KYILVDLDSAETLLIHLGMSGRMLISGHTVGEFHHP-----HPVPAKHDHVVFHMDDGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ T I +LGP+ L + L + IK+ LLD
Sbjct: 113 ITFNDARRFGAMDLMETATQDDHWLIRDLGPEPLGNAFNESYLIERLKGRNTPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFY 233
Q +SG+GN EVL++A IHP + A +S ATL+ I++V EA+ G SL+ Y
Sbjct: 173 QRIVSGLGNIYVCEVLFRAGIHPARKAGRISAARVATLVPLIRDVLSEAIAAGGSSLRDY 232
Query: 234 K 234
+
Sbjct: 233 R 233
>gi|326330625|ref|ZP_08196929.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium
Broad-1]
gi|325951466|gb|EGD43502.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium
Broad-1]
Length = 289
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H +G +IV + V ++ AS F + G+ + A R+G
Sbjct: 1 MPELPEVEVVRAGLERHVLGARIVAVDVLHPRPVRRHLAGASAFADELKGRVLTGARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD---D 116
K LWL LDS GM+G + ++ A DE ++ + + L+ +
Sbjct: 61 KYLWLPLDSGDALMAHLGMSGQMLVQPPA----------SPDE---RHLRVRIRLEGAAE 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G EL F D+R F + + +PP I+ + PD L + + + IK +L
Sbjct: 108 GRELRFVDQRMFGGLSISPGGAELPPEIAHIAPDPLEAAFDAEAVVRWVRRSASGIKRIL 167
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+Q+ ISG+GN ADE L++AK+H + L+ LL + +V
Sbjct: 168 LNQTVISGVGNIYADEALWRAKLHGERPGERLTAPKVRELLGHVHDV 214
>gi|330466267|ref|YP_004404010.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Verrucosispora maris AB-18-032]
gi|328809238|gb|AEB43410.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Verrucosispora maris AB-18-032]
Length = 285
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 26/266 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE R+ + G++I + V V+ A VL G+ +L R+G
Sbjct: 1 MPELPEVETVRQGLARWVTGRRIESVEVRHPRAVRRHVAGGAHFADVLAGRTVLDVCRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ + V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPATAPEEPHLRVR------------FRFTDDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + ++P I+ + D L + +F ++ +++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGATLPAEIAHIARDPLDPQFSDADFVTAMRRRRTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EALG 227
+ ISG+GN ADE L++A +H + +L+ + LL +++V +AL
Sbjct: 169 TLISGVGNIYADEALWRAGLHGTRPTDALTGPAVRRLLGHVRDVLTEAITAGGTSFDALY 228
Query: 228 VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + ++ RE + CR
Sbjct: 229 VNVNGQSGYFDR-SLNVYGREGQPCR 253
>gi|315653651|ref|ZP_07906571.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC
55195]
gi|315489013|gb|EFU78655.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC
55195]
Length = 276
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ I + R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKISAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDTPKQKHEHVQFAFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYF 237
S + G+GN DEVL+Q+KIHPL A ++++S L++ ++ + +++Q++ F
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDS---LVELFYDINNTIKIAIQYHGTTF 221
>gi|424757300|ref|ZP_18185054.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R508]
gi|402407373|gb|EJV39905.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R508]
Length = 280
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A L ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADFLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|333374342|ref|ZP_08466224.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437]
gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437]
Length = 274
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +++ GK + + ++ + + F + G+ + R+GK
Sbjct: 1 MPELPEVETVKRTLQKLITGKTVEEVKVSLPRILQEPPDPQLFGEMLKGRKVTGVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D + + + ++G R +++ + +K++ DG EL
Sbjct: 61 FLRIFFDP-------WVLVSHLRMEG-------RYSLESAETPVAKHTHVIFRFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + ++PP+ +LGP+ L E T+ F L+K+K IKALLL+Q
Sbjct: 107 RYRDVRQFGTMHLWPKGEELNLPPLRKLGPEPLSEAFTLAGFAAGLAKRKTNIKALLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK----EVREALGVSLQFY 233
++ G+GN DE L+ A IHP + SL + L K I+ + EA G S++ Y
Sbjct: 167 EFLCGLGNIYVDEALFTAGIHPERRVQSLDSDEVKRLYKSIRSTLVKAVEAGGSSVRSY 225
>gi|293556213|ref|ZP_06674803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039]
gi|291601632|gb|EFF31894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039]
Length = 278
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLKRLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + + + K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEGKYQFTKENTPI-------DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
++G+GN DE L++AKIHP Q A +L + L + + EA G +++ Y
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSY 224
>gi|406994133|gb|EKE13175.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[uncultured bacterium]
Length = 275
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 15/222 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE + + ++ G+KIV ++ D + + S F +V GK I S R K
Sbjct: 1 MPELPETQTIAALLNKNLKGRKIVTVQVSKDYRALP--STEIFIKAVTGKEIKSVRRVAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ + L++ F MTG + + + ++ K + LD+G++L
Sbjct: 59 NILIELENGNHILFHLAMTGRLLLWNDKIGN-------------ERWVKVILHLDNGVKL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F+D R F K +L+ + + GP+ L + T + D L K+ IK LLDQ
Sbjct: 106 TFSDMRVFGKAAVLSPKQTQELEARYGPEPLDKKTTHQQLVDRLKTKRTNIKNALLDQEI 165
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISGIGN A + L+ AKI+P ++ E+ LL I+ V
Sbjct: 166 ISGIGNIYATDALFLAKINPFTKTSEITLENANRLLDSIRSV 207
>gi|325290276|ref|YP_004266457.1| DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA
glycosylase [Syntrophobotulus glycolicus DSM 8271]
gi|324965677|gb|ADY56456.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA
glycosylase [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 134/269 (49%), Gaps = 35/269 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEAS--VLGKAILSAHRK 58
MPELPEVE R ++ ++ IG++I + + + V+A+D + + ++GK + S R+
Sbjct: 1 MPELPEVENIRLSLAKNIIGQEIKEFKLFWPDVF---VNATDLDPNDLLIGKKVESLGRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L++ L F MTG IY +G + P K++ L++G
Sbjct: 58 GKYLFIHLAGSVTLILHFRMTGKLIYYQG--------------EHEPEKHTHAVFYLENG 103
Query: 118 LELSFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
++ +D R+F +++L+ VP I++LGP+ E +++ F LS KK TIK+ L
Sbjct: 104 -QIHHSDMRKFGRIQLVETALLGKVPAIAKLGPEPFDERFSIEVFGQRLSGKKSTIKSAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQ 231
LDQ ++GIGN ADE L+ A I P + SL L I K EA G S +
Sbjct: 163 LDQETVAGIGNIYADEALFMAGIRPERRTASLKISEVILLYDAIQGALKAGIEAGGTSFR 222
Query: 232 FYK-------CYFAKPYVHKKHREN-KIC 252
Y+ + YV+ + +N K+C
Sbjct: 223 DYRDGDGNKGLFQENLYVYGRAGQNCKVC 251
>gi|306836416|ref|ZP_07469393.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC
49726]
gi|304567697|gb|EFM43285.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC
49726]
Length = 271
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADD--NKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ RR +E + +GK+I IA N+ D V+GK I + R+
Sbjct: 1 MPELPEVESVRRGVESYVVGKEITSVDIAHPRANRGQD----EPLAGLVVGKEIAAVARR 56
Query: 59 GKNLWLR-LDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL + P S GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIG-------------HTD---SPHRRIT 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
V L D EL F D+R F L P S IS +G D L + L KKK +
Sbjct: 101 VVLSDATELHFVDQRTFGY--WLYAPWST--ISHIGLDPLEPDFDIASAARRLRKKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
K LLDQ+ +SGIGN ADE L+ A+I P + A +L ++ LL + V A
Sbjct: 157 KTALLDQTLVSGIGNIYADEALWTARISPRKKASALRQKDAVALLSAAQTVMSA 210
>gi|397699269|ref|YP_006537057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis D32]
gi|397335908|gb|AFO43580.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis D32]
Length = 280
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL A L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVAKLYQAIIDVLARAVEAGGTTIRTY 224
>gi|413943564|gb|AFW76213.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 139
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
M+VD F DSL +KKI IKALLLDQS+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC
Sbjct: 1 MSVDSFLDSLGRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNLPRESCEA 60
Query: 215 LLKCIKEV 222
L + I+EV
Sbjct: 61 LHQSIEEV 68
>gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|373451726|ref|ZP_09543645.1| formamidopyrimidine-DNA glycosylase [Eubacterium sp. 3_1_31]
gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|371967947|gb|EHO85414.1| formamidopyrimidine-DNA glycosylase [Eubacterium sp. 3_1_31]
Length = 276
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 21/235 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H +G +K + +I + F A + GK I R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLGNVTIKDCHVLWDNIIAYPTPQTFCAQIKGKTIQHYERYGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S + + M G YI+ +DE K+ +L DG +L
Sbjct: 60 YLLFDLGSMMWIA-HMRMEGKFYIQ-------------KSDEPYDKHVHVLFDLQDGRQL 105
Query: 121 SFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L D P +G DA E +T +L K+KI +KA LLD
Sbjct: 106 RYHDTRKFGKMYLYEKRKDIHQYPCFQNIGLDAFDERLTPTYLYHALHKRKIVLKAALLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQF 232
QS I+GIGN ADE+ + +HP L K+ LL +E R L ++++
Sbjct: 166 QSVIAGIGNIYADEICFALGMHPETKIYHLRKKDFERLL---QETRRILQGAIRY 217
>gi|300859742|ref|ZP_07105830.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD
Ef11]
gi|300850560|gb|EFK78309.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD
Ef11]
Length = 280
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + + I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLASQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|297191815|ref|ZP_06909213.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151083|gb|EFH30953.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
pristinaespiralis ATCC 25486]
Length = 286
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 31/270 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + + A DF A + G+ + A R+G
Sbjct: 1 MPELPEVEVVRRGLQSWVSGRTIADVQVLHPRAIRRHLPGAQDFAARLTGRTVGDARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL- 118
K LWL P + G + + G + Q + + DE K+ + + D L
Sbjct: 61 KYLWL-----PLADTDTSILGHLGMSGQLLVQPEHA----DDE---KHLRIRIRFTDPLA 108
Query: 119 -ELSFTDKRRFAKVRLL-NDPTSVPPI-SELGPDALLEPMTVDE-FTDSLSKKKITIKAL 174
EL F D+R F + L N P +P + + + D L +P+ D F +L ++ T+K
Sbjct: 109 TELRFVDQRTFGGLSLHENAPDGLPDVLAHIARDPL-DPLFDDAAFHTALRARRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA--------- 225
LLDQS ISG+GN ADE L++AK+H + +L++ LL+ ++EV A
Sbjct: 168 LLDQSLISGVGNIYADEALWRAKLHYERPTATLTRPRSVELLRHVREVMTAALAVGGTTF 227
Query: 226 --LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 228 DSLYVNVNGESGYFDR-SLDAYGREDEPCR 256
>gi|374581859|ref|ZP_09654953.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus youngiae
DSM 17734]
gi|374417941|gb|EHQ90376.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus youngiae
DSM 17734]
Length = 273
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H G +I + I + + G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLAQHVTGLEI-REIKLIWSSAVCGWEDQSFEYLVTGRRIKTIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RLD MTG + Y S + P K++ +L+ G E+
Sbjct: 60 YLLIRLDEDLTLIAHMRMTGRL-------NYYAES------QEPEKHTHVVFQLEHG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F+D R+F +++ + PT S + +LGP+ L T + + KK +++KA LL
Sbjct: 106 HFSDVRKFGRIQAI--PTQLCISGSSLCKLGPEPLEAEFTPEVLKERFGKKTLSLKAALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQF 232
DQ ++G+GN DE L+QA I P + +LS+E + L I+ V + A G S +
Sbjct: 164 DQHVLAGLGNIYVDESLFQAGISPERGVDTLSEEEISRLHGAIRNVLQAGIDAQGTSFRD 223
Query: 233 YK 234
Y+
Sbjct: 224 YR 225
>gi|253577307|ref|ZP_04854625.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843311|gb|EES71341.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 285
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +GK I + + FEA + G IL R+GK
Sbjct: 1 MPELPEVETVRRTLTQLIVGKTIQSVHVFLPRIIQRPDDIRRFEAELAGHTILEIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + +D G + + + + R + E K++ DG EL
Sbjct: 61 FLRIIMD------------GLVLVSHLRME--GRYGLYQPGEEVEKHTHVIFRFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+ +LG + L E T+ F D +S++ IK LL+Q
Sbjct: 107 RYKDVRQFGTMHLFAPGEEFTNKPLVKLGLEPLEESFTLQAFQDKISRRTTKIKPALLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSLQFY 233
YI G+GN DE L++A IHP A L+K A +++ + E EA G S++ Y
Sbjct: 167 EYIVGLGNIYVDEALFRAGIHPEYPADKLTKRQLEQLHAAIVETLTEAVEAGGSSIKSY 225
>gi|336117264|ref|YP_004572031.1| formamidopyrimidine-DNA glycosylase/AP lyase [Microlunatus
phosphovorus NM-1]
gi|334685043|dbj|BAK34628.1| formamidopyrimidine-DNA glycosylase/AP lyase [Microlunatus
phosphovorus NM-1]
Length = 282
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 23/265 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE+ RR + G+ I + + + + DF A + G+ R+G
Sbjct: 1 MPELPEVESVRRGLAGGLTGRTIAQVTVLHPRPLRRHLPGPDDFVAQLAGRTFTEPRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL GM+G + + V F D GL+
Sbjct: 61 KYLWLPFADGDALLAHLGMSGQFRFHAADAPLQRNTRV---------LVDFTDGADGGLQ 111
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + L +PP I+ + D L +D L +K+ IK LLDQ
Sbjct: 112 LRFVDQRMFGGLSLSEGGAELPPEIAHIARDPLDPEYDLDAVVARLRRKRTGIKRALLDQ 171
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EALG 227
ISGIGN ADE L+QA++H + ++S+ + +L +V +AL
Sbjct: 172 QLISGIGNIYADEALWQARMHYARATDTMSRRAAVNVLTAAAQVMTEALAVGGTSFDALY 231
Query: 228 VSLQFYKCYFAKPYVHKKHRENKIC 252
V++ YF + +H RE + C
Sbjct: 232 VNVNGDSGYFDR-SLHAYGREGEPC 255
>gi|302024112|ref|ZP_07249323.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05HAS68]
gi|330832409|ref|YP_004401234.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3]
gi|329306632|gb|AEB81048.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3]
Length = 275
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 116/244 (47%), Gaps = 30/244 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWP-SKYSKFFVELDD 116
L IY+ + + R K D+ P +K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSL 230
LLDQS ++G+GN DEVL++AK+HP QT+ LS E A L + EV E G ++
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSAEQVADLRQATIEVLQLGIEKGGSTI 220
Query: 231 QFYK 234
+ YK
Sbjct: 221 RTYK 224
>gi|312109949|ref|YP_003988265.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1]
gi|336234371|ref|YP_004586987.1| formamidopyrimidine-DNA glycosylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718990|ref|ZP_17693172.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215050|gb|ADP73654.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1]
gi|335361226|gb|AEH46906.1| formamidopyrimidine-DNA glycosylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383367893|gb|EID45168.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 274
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK + + + + S+F ++ G+ I HR+GK
Sbjct: 1 MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D S M G +Y S KD E ++ + DG EL
Sbjct: 61 FLKFIFDEHVLIS-HLRMEG----------RYAVSKKKDAIE---PHTHVIFQFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ E T + L K TIKA LLDQ
Sbjct: 107 RYRDVRKFGTMHLYPKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK----CIKEVREALGVSLQFY 233
+ + G GN DE L++A IHP + A SL+ E A L + ++E E G +++ Y
Sbjct: 167 TVVVGFGNIYVDEALFRAGIHPERAASSLTDEEAACLHREMVATLQEAVEKGGSTVRSY 225
>gi|441471260|emb|CCQ21015.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes]
gi|441474391|emb|CCQ24145.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes N53-1]
Length = 273
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K TIK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRTIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + K K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTY 224
>gi|121534306|ref|ZP_01666130.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans
Nor1]
gi|121307076|gb|EAX47994.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans
Nor1]
Length = 274
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + + +G++I +++ D +++ S S+F+ +V G+ I R+GK
Sbjct: 1 MPEMPEVETIRRTLADKVVGRRI-EAVKIDLPRLVKWPSVSEFKEAVTGRKIERLDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL+ MTG +Y K++ +LD+ L
Sbjct: 60 YLLFRLEHDLVMVVHLRMTGRLYYVPAGYQH-------------DKFTHIVFDLDNNDAL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R + ++ D + ++ +GP+ L T D F L K++ +IKA+LL+Q
Sbjct: 107 IYADSRTLGTLYAIHLADLGRIAGLATMGPEPLSPEFTFDYFRMMLKKRQSSIKAVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
I G+GN DE L A I P + A SLS++ L + I +V E
Sbjct: 167 QLIGGLGNIYVDESLAVAGIAPTRPAASLSEDETQKLYRAINQVIE 212
>gi|253752113|ref|YP_003025254.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84]
gi|253753938|ref|YP_003027079.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7]
gi|253755187|ref|YP_003028327.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407]
gi|386580297|ref|YP_006076702.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14]
gi|386582312|ref|YP_006078716.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SS12]
gi|386588499|ref|YP_006084900.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis A7]
gi|251816402|emb|CAZ52033.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84]
gi|251817651|emb|CAZ55399.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407]
gi|251820184|emb|CAR46549.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7]
gi|319758489|gb|ADV70431.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14]
gi|353734458|gb|AER15468.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SS12]
gi|354985660|gb|AER44558.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis A7]
Length = 275
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L + L S M G +Y A D+ P +K+ F DG
Sbjct: 59 YLLIYLTDHVLIS-HLRMEG----------KYNFFA----DQVPANKHFHAFFTFIDGST 103
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D + ++GP+ E ++EF L+K K IK+ LLD
Sbjct: 104 LVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
QS ++G+GN DEVL++AK+HP QT+ LS + A L + EV E G +++ Y
Sbjct: 164 QSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTY 223
Query: 234 K 234
K
Sbjct: 224 K 224
>gi|297202625|ref|ZP_06920022.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
gi|197713200|gb|EDY57234.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
Length = 286
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 117/230 (50%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G + + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGAEDFAHRLEGHRVGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + ++ A K ++ +F E+D
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAPDEKHLRIR---------VRFADEVD--T 109
Query: 119 ELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKALL 175
EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK L
Sbjct: 110 ELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRSTIKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LDQS ISG+GN ADE L++++IH + ++ A LL +++V A
Sbjct: 169 LDQSLISGVGNIYADEALWRSRIHYERPTAGFTRPRTAELLGHVRDVMNA 218
>gi|42519527|ref|NP_965457.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC
533]
gi|81703799|sp|Q74IB5.3|FPG_LACJO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|41583816|gb|AAS09423.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC
533]
Length = 276
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ + +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVN--NPDEFVEKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + + D K+ DG L
Sbjct: 59 YLLFRF------SDDLTMVSHLRMEG-------KYHLVTPDHPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+Q+KIHPL +A S+ + L I
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHT 209
>gi|380302782|ref|ZP_09852475.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium squillarum
M-6-3]
Length = 335
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 120/283 (42%), Gaps = 29/283 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G+ + + D + D +LG I + R+G
Sbjct: 1 MPELPEVEVVRRGLEPHVLGRTVTGLELLDARIIRRQHGGEDRLRDGLLGARIDAVARRG 60
Query: 60 KNLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS----KYSK 109
K LWLRL P GM+G + ++GV +AV E P+ ++ +
Sbjct: 61 KFLWLRLSEPDGGDRGDALVAHLGMSGQLRLRGVLPEPGDPAAVPAPSEGPASDPLRHRR 120
Query: 110 FFVELDDGLELSFTDKRRFAKV--RLLNDPTSVPPISELGPDALLEPMTVDEFTDSLS-- 165
+ LDDG L D+R F + L++ P PDALL D D L
Sbjct: 121 LTLTLDDGARLDMIDQRLFGGIWTSPLDEAADGRPAGRGNPDALLPRDARDIARDLLDPA 180
Query: 166 -----------KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
++ +K+LLL Q +SGIGN ADE L+QA+ LS+
Sbjct: 181 ADLPGIARAIRARRAPVKSLLLSQGIVSGIGNIYADEGLWQARTRYDTPGSLLSQRRALA 240
Query: 215 LLKCIKEVREALGVSLQFYKCYFAKPYVHKKHRENKICRLFKV 257
+L+ ++V E +L+ F YV+ R R V
Sbjct: 241 ILRGTRDVMER---ALEVGGTSFDALYVNVDGRSGYFARSLAV 280
>gi|335049527|ref|ZP_08542517.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 199-6]
gi|333762787|gb|EGL40272.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 199-6]
Length = 280
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +GK+IV+ + N V+ + F V+GK I R+GK
Sbjct: 1 MPELPEVETVRTHLAPYVVGKRIVQVEVNAPN-VLKNTTVPGFRNRVVGKRIEGLVRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L MTG + R A+++ ++ + L GL L
Sbjct: 60 YLQFLLSGEQAVLVHLRMTGKLLY---------RPALQEEPR-----ARLRLHLQKGL-L 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F L+ PT VP LGPDA E T L+ KK IKALLLDQ
Sbjct: 105 VYEDVRTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ A I P + A ++S+ L I V
Sbjct: 165 HVVAGLGNIYVDEALFAAHIRPDRQAATISRTEVGKLHAAIGRV 208
>gi|110677612|ref|YP_680619.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh
114]
gi|122973136|sp|Q16DL0.1|FPG_ROSDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|109453728|gb|ABG29933.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh
114]
Length = 283
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 15/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + +D A + GK + R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIAR---ADVNRPDLRWPFPADMAARLTGKRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + + G + Q+ S P K+ + +
Sbjct: 58 KYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHS-----HPAPEKHDHVVFHMANNAR 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ ++ +S LGP+ L ++ + +K++LLD
Sbjct: 113 ITFNDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
Q +SG+GN E L++AKIHP++ A +S ATL+ I+EV EA G SL+ +
Sbjct: 173 QRIVSGLGNIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVLAEAIEAGGSSLRDF 232
Query: 234 K 234
K
Sbjct: 233 K 233
>gi|429506197|ref|YP_007187381.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429487787|gb|AFZ91711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 278
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|408680984|ref|YP_006880811.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC
10712]
gi|328885313|emb|CCA58552.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC
10712]
Length = 286
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 29/269 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V +DF A + G+ A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVTEVEVLHPRAVRRHPAGGADFAARLTGQRFEVARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LWL P + G + + G + Q + +A DE K+ + + DD G
Sbjct: 61 KYLWL-----PLAESGTSVLGHLGMSGQLLVQPEGAA----DE---KHLRIRIRFDDSAG 108
Query: 118 LELSFTDKRRFAKVRLLND-PTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL F D+R F + L + P +P I + D L F +L ++ T+K L
Sbjct: 109 TELRFVDQRTFGGLSLHDQTPAGLPDVIGHIARDPLDPEFDDAAFQSALRLRRTTVKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA---------- 225
LDQS ISG+GN ADE L+++++H + +L++ A LL I++V A
Sbjct: 169 LDQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRSAELLGHIRDVMNAALAVGGTSFD 228
Query: 226 -LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 229 SLYVNVNGESGYFDR-SLDAYGREDEPCR 256
>gi|354721361|ref|ZP_09035576.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter mori LMG 25706]
Length = 269
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDAFNAEYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|284008829|emb|CBA75606.1| formamidopyrimidine-DNA glycosylase [Arsenophonus nasoniae]
Length = 269
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G KI SI+ N + A++ + +++LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGNKIQYSIVR--NSQLRWPVATEI-LHIANESVLSVKRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++L + GM+G+I I ++ K+ + L DG L
Sbjct: 58 YLLIQLQHG-WIIIHLGMSGSIRILA-------------KEQLAEKHDHIDLVLADGKTL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF ND + P + LGP+ L D KK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTNDLDNCPVLFHLGPEPLSTDFNADYLYQRAKNKKTAIKPWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ AKI P + A SL+++ L+ IK++
Sbjct: 164 VVGVGNIYANEALFAAKILPTRAAHSLTRKEIDNLVIQIKQI 205
>gi|408382465|ref|ZP_11180009.1| DNA-formamidopyrimidine glycosylase [Methanobacterium formicicum
DSM 3637]
gi|407814820|gb|EKF85443.1| DNA-formamidopyrimidine glycosylase [Methanobacterium formicicum
DSM 3637]
Length = 238
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 17/185 (9%)
Query: 38 VSASDFEASVLGKAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV 97
S++ + ++ G + R GK L+ +LDS F FGMTG ++ +
Sbjct: 12 TSSNQMKKAMEGHEFTESTRYGKYLFAKLDSDLFLIMHFGMTGYLHYE------------ 59
Query: 98 KDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTV 157
+ S+Y + ++ G L+F D R+F K+ L DP +LGPDAL ++
Sbjct: 60 ---HQNTSRYPRLLIKFSGGNFLAFDDARKFGKLGLTLDPDEFIENKKLGPDAL--EVSF 114
Query: 158 DEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
+F D + +K IK LLL+Q+ ++GIGN ADE+LYQ+++HPL A + K+ + +
Sbjct: 115 KDFYDIVHGRKGMIKPLLLNQNILAGIGNLYADEILYQSRVHPLTRANLIDKQGWGQIFQ 174
Query: 218 CIKEV 222
+K+V
Sbjct: 175 NMKKV 179
>gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK]
gi|315445100|ref|YP_004077979.1| bifunctional DNA-(apurinic or apyrimidinic site)
lyase/formamidopyrimidine-DNA glycosylase [Mycobacterium
gilvum Spyr1]
gi|189044665|sp|A4TE57.1|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum
PYR-GCK]
gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA
glycosylase [Mycobacterium gilvum Spyr1]
Length = 282
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + + V + R AV LDDG
Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLLGPVRNENHLRIAVL---------------LDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ + D L + L +K IK
Sbjct: 106 LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----------- 223
LLDQ+ +SGIGN ADE L++AKI+ + A +SK A LL +V
Sbjct: 166 LLDQTVVSGIGNIYADESLWRAKINGARLASGVSKAKLAELLDAATDVMTDALAQGGTSF 225
Query: 224 EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
++L V++ YF + + RE + CR
Sbjct: 226 DSLYVNVNGESGYFDRS-LDAYGREGEPCR 254
>gi|386715048|ref|YP_006181371.1| formamidopyrimidine-DNA glycosylase [Halobacillus halophilus DSM
2266]
gi|384074604|emb|CCG46097.1| formamidopyrimidine-DNA glycosylase [Halobacillus halophilus DSM
2266]
Length = 278
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ + K I + N + + +F+ + G++ L RKGK
Sbjct: 1 MPELPEVETVRQTLKNLVLKKTIDDVSVYWGNIIKNPRDPDEFKRLLKGQSFLDIERKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +D S M G + D + K++ DG EL
Sbjct: 61 FMIFHMDDLVLVS-HLRMEGKF-------------GLYDAEVEKPKHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+++LGPD + T+D F L + IKA+LLDQ
Sbjct: 107 RYDDVRKFGTMHVFPKGEELDRKPLNQLGPDPFDKAFTLDYFFHKLQRTSRNIKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREALGVSLQFYKCYF 237
S ++G+GN DE LY+A+IHP + A L KE + K ++ + EA+G+ + Y
Sbjct: 167 SIVAGLGNIYVDEALYRARIHPERLANKLLKEEADRIRKSSVQIIEEAIGLGGSTIRSYL 226
>gi|367467709|ref|ZP_09467631.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
gi|365817258|gb|EHN12234.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
Length = 323
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 125/292 (42%), Gaps = 73/292 (25%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR E G+ +V AD+ V + +V G+ I R GK
Sbjct: 1 MPELPEVEAARALAERWTSGRTVVDVEDADE-WVCRPHPPGEIAKAVSGRRIERVGRIGK 59
Query: 61 NLWLRLD--------------------------------SPPFPSFQFGMTGAIYIK--- 85
+LWL LD SP PS G GA +
Sbjct: 60 SLWLELDDERRLGLHLGMAGRLVGLAPEGAGPDHEPGAVSPGGPSDLPGGWGATRLDERL 119
Query: 86 ----GVAVTQYKRSAVKDTDEWP-----------------SKYSKFFVELDDGLELSFTD 124
G+ T + ++ W +++F ++LDDG L D
Sbjct: 120 AAAAGLPDTAGEPLTARERASWSMPVGRGSRPPLRDLPGDGSWTRFALDLDDGSRLLLFD 179
Query: 125 KRRFAKVRLLNDPTSVPPISELGPDALLEPMTVD--EFTDSLSKKKITIKALLLDQSYIS 182
KRR A+VRL P +S LGPDAL T+D F + + + +KA L+DQS ++
Sbjct: 180 KRRLARVRL------DPDLSTLGPDAL----TIDAATFAERVGRGNAPLKARLMDQSVLA 229
Query: 183 GIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSL 230
G+GN + DEVL+QA PL+ A L++E TL+ C +E GV +
Sbjct: 230 GVGNLLCDEVLWQAAKSPLRPAGELTREELDDLHETLIDCTREAIARGGVHM 281
>gi|294501499|ref|YP_003565199.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551]
gi|294351436|gb|ADE71765.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551]
Length = 277
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK I + + N + F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD + M + ++G + A+ + E P K+ F DG EL
Sbjct: 61 FLKIVLDD-------YTMVSHLRMEG-------KYALHENAEEPDKHVHVFFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + PP+ LGP+ E + + K IK +LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKES--------CATLLKCIKE 221
+ + G+GN DE L++A IHP + A L+ E ATL + +K+
Sbjct: 167 NVVVGLGNIYVDEALFRAGIHPERVASQLTDEEYEKLYEEIVATLQEAVKQ 217
>gi|451345942|ref|YP_007444573.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens IT-45]
gi|449849700|gb|AGF26692.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens IT-45]
Length = 276
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|345009586|ref|YP_004811940.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu
4113]
gi|344035935|gb|AEM81660.1| Formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu
4113]
Length = 310
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V + DF A + G+ R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60
Query: 60 KNLWLRLDSPPFPSF---QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL D GM+G + ++ + DE K+ + V D
Sbjct: 61 KYLWLPFDDDAAAEAVLAHLGMSGQLLVQ----------PAEAPDE---KHLRIRVRFAD 107
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLS 165
G EL F D+R F + L + +VP E PDA+ L+P DE F +L
Sbjct: 108 AAGTELRFVDQRTFGGLSLHD---TVPGDLEGLPDAIAHIARDPLDP-AFDEAAFHTALR 163
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+++ TIK LLDQS ISG+GN ADE L++A++H + +L++ A LL ++EV A
Sbjct: 164 RRRTTIKRALLDQSLISGVGNIYADEALWRARLHYDRPTATLARPRAAELLGHVREVMTA 223
Query: 226 -----------LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + REN+ CR
Sbjct: 224 ALAVGGTSFDSLYVNVNGESGYFER-SLDAYGRENEPCR 261
>gi|238063284|ref|ZP_04607993.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149]
gi|237885095|gb|EEP73923.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149]
Length = 285
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE R+ + + G++I + + ++ A VL G+ + R+G
Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAGVEVRHPRAIRRHLAGPAHFADVLAGRTVRDVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L+S GM+G + ++ V+ F DDG E
Sbjct: 61 KYLWLPLNSGDAIVGHLGMSGQLLLQPATAADELHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +PP I+ + D + + F +L +++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLAVSAGGAELPPEIAHIARDPMDPGFSDGAFVAALLRRRTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+ +SGIGN ADE L++AK+H Q L+ + L I VR+ LG +++ F
Sbjct: 169 TLVSGIGNIYADEALWRAKLHGAQPTDQLTAPAAQRL---IGHVRDVLGEAVKEGGTSFD 225
Query: 239 KPYVH 243
YV+
Sbjct: 226 ALYVN 230
>gi|227520125|ref|ZP_03950174.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104]
gi|424676418|ref|ZP_18113291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV103]
gi|424679375|ref|ZP_18116200.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV116]
gi|424682426|ref|ZP_18119197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV129]
gi|424686083|ref|ZP_18122754.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV25]
gi|424689281|ref|ZP_18125867.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV31]
gi|424692793|ref|ZP_18129269.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV37]
gi|424697103|ref|ZP_18133439.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV41]
gi|424699382|ref|ZP_18135602.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV62]
gi|424703822|ref|ZP_18139946.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV63]
gi|424705989|ref|ZP_18142003.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV65]
gi|424716174|ref|ZP_18145488.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV68]
gi|424719115|ref|ZP_18148337.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV72]
gi|424722541|ref|ZP_18151591.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV73]
gi|424726297|ref|ZP_18154965.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV81]
gi|424734500|ref|ZP_18163012.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV85]
gi|424746551|ref|ZP_18174782.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV93]
gi|227072415|gb|EEI10378.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104]
gi|402356958|gb|EJU91676.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV103]
gi|402357071|gb|EJU91786.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV116]
gi|402367722|gb|EJV02060.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV129]
gi|402368027|gb|EJV02354.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV25]
gi|402369018|gb|EJV03316.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV31]
gi|402376340|gb|EJV10285.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV62]
gi|402376656|gb|EJV10590.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV41]
gi|402376863|gb|EJV10781.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV37]
gi|402383747|gb|EJV17330.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV63]
gi|402388519|gb|EJV21954.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV68]
gi|402388805|gb|EJV22231.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV65]
gi|402397069|gb|EJV30105.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV72]
gi|402399864|gb|EJV32719.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV81]
gi|402401871|gb|EJV34612.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV73]
gi|402407906|gb|EJV40404.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV85]
gi|402409278|gb|EJV41710.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV93]
Length = 280
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTSEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL ATL + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPVEVATLYQAIIDVLARAVEAGGTTIRTY 224
>gi|225021994|ref|ZP_03711186.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii
ATCC 33806]
gi|224945280|gb|EEG26489.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii
ATCC 33806]
Length = 308
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ I + + + +F + +LG++I+ R+G
Sbjct: 1 MPELPEVETIRRGLAEHVCGRTIADVAVHHPRAIRHVLGGEGEFRSEILGRSIIGLGRRG 60
Query: 60 KNLWLRLDSPPF------------PSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKY 107
K LWL L P P+ Q G + G++ + + ++D+ K+
Sbjct: 61 KFLWLNLADPAVAAASASSGPTSQPTPQAGDQVVVVHLGMSGQMLIKDSNANSDDPKFKH 120
Query: 108 SKFFVELDDGLELSFTDKRRFA---KVRLLNDPTS-VPPISELGPDALLEP-MTVDEFTD 162
+ V DD +L F D+R F +L++ VP ++ LL+P + + E
Sbjct: 121 CRIQVRFDDNTQLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDPELKLSEVAS 180
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ K + +K LLL+Q I+GIGN ADE+L+ A I+P Q A +L + LL + V
Sbjct: 181 MMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPAALKNLLMAGRTV 240
Query: 223 REA 225
A
Sbjct: 241 MRA 243
>gi|307103677|gb|EFN51935.1| hypothetical protein CHLNCDRAFT_9497 [Chlorella variabilis]
Length = 150
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%)
Query: 130 KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVA 189
+VR L+ P VPPISELG D LL+ ++ F L ++ IKA+LLDQS+ +GIGNWVA
Sbjct: 1 QVRFLDRPEGVPPISELGWDPLLDMPSLPSFAAQLGGQRRAIKAVLLDQSFSAGIGNWVA 60
Query: 190 DEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DEVLYQA+IHP Q A S+ +E A L + I V
Sbjct: 61 DEVLYQARIHPEQPAHSVPQEQVAALHRAISHV 93
>gi|227534793|ref|ZP_03964842.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187549|gb|EEI67616.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 295
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 123/242 (50%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++ I + R+G
Sbjct: 14 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVSSEITTIDRRG 70
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 71 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 118
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 119 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEPT--PSTFDEADFAQRLKRHHKPIKSVL 176
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQ 231
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S
Sbjct: 177 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 236
Query: 232 FY 233
Y
Sbjct: 237 TY 238
>gi|399155400|ref|ZP_10755467.1| formamidopyrimidine-DNA glycosylase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 272
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E G I I N ++ G F+ + G+ L R+ K
Sbjct: 1 MPELPEVETVVRELREKICGDIISSVEIFRSNPIVQG-DLDTFQEQLCGRKFLDVRRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ + MTG V D P+KY++ + L+ G ++
Sbjct: 60 YLIFNLEPKRYLVAHLRMTGKF-------------IVSDPLPEPTKYNRVWFNLESGRQM 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R F + + +D + +LG + L + MT+ F +L K IK+ LLDQ
Sbjct: 107 IFDDIRCFGTLEVYDDLADSKSLQKLGIEPLSKAMTLGYFKKNLGSSKREIKSALLDQQI 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I+G+GN E+L+ ++IHP ++A S+++ + ++K K +
Sbjct: 167 IAGLGNIYVSEILFHSRIHPQRSAGSINEREWSLIIKYTKYI 208
>gi|116495189|ref|YP_806923.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei ATCC 334]
gi|418002397|ref|ZP_12642515.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UCD174]
gi|116105339|gb|ABJ70481.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Lactobacillus casei ATCC 334]
gi|410544053|gb|EKQ18391.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UCD174]
Length = 282
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 123/242 (50%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++ I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVSSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEPT--PSTFDEADFAQRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQ 231
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I+E+ A+ G S
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 232 FY 233
Y
Sbjct: 224 TY 225
>gi|227889521|ref|ZP_04007326.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC
33200]
gi|227849999|gb|EEJ60085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC
33200]
Length = 276
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIAKIIIWYPKIIVN--DPDEFVKKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + + D+ K+ DG L
Sbjct: 59 YLLFR--------FNDGLTMVSHLR-----MEGKYHLVTPDQPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+Q+KIHPL +A S+ + L I
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHT 209
>gi|85706182|ref|ZP_01037277.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217]
gi|85669346|gb|EAQ24212.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217]
Length = 283
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I ++ + + + + A + G+ +L+ R+ K
Sbjct: 1 MPELPEVETVRRGLAPIMEGQVIARATV--NRPDLRWPFPPEMSARLTGQRVLALRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G + I G + Q+ + P K+ +++ G +
Sbjct: 59 YLLADLASGETLLIHLGMSGRMLISGDPLGQFVHA-----HPAPEKHDHVVLDMAGGARI 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T S P ++ +GP+ L T +L + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLMPTTTAESHPLLARIGPEPLGNDFNELYLTAALKGRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYK 234
++G+GN E LY+A I PL A +LS + A+L+ I++V R+A+ G SL+ ++
Sbjct: 174 RIVAGLGNIYVCETLYRAGISPLTRAGTLSAKRAASLVPIIRDVLRDAITAGGSSLRDFR 233
Query: 235 ------CYFAKPYVHKKHRENKICR 253
YF + RE +CR
Sbjct: 234 QTDGELGYFQHSF-DVYGREGDLCR 257
>gi|296100497|ref|YP_003610643.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295054956|gb|ADF59694.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 269
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|440696023|ref|ZP_20878526.1| DNA-formamidopyrimidine glycosylase [Streptomyces turgidiscabies
Car8]
gi|440281781|gb|ELP69326.1| DNA-formamidopyrimidine glycosylase [Streptomyces turgidiscabies
Car8]
Length = 286
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V V+ DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVARRTVADAEVLHPRAVRRHVAGPDDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + V+ D K+ + V D L
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLL-------------VQPHDAADEKHLRIRVRFADDL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 ATELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L+++++H + V ++ A LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRVHYERPTVGFTRPRTAELLGHVRDVMNA 218
>gi|283769053|ref|ZP_06341959.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219]
gi|283104410|gb|EFC05787.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219]
Length = 269
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ I + ++S+ +K++ F + G+ R+GK
Sbjct: 2 MPELPEVETVVRTLEQQ-ISQCQIRSVRVYYDKIVG--DPKRFTDCLSGQRFRYFSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD M G YI+ D E +++ +LD+G+EL
Sbjct: 59 YLLFQLDRNTL-VVHLRMEGKFYIQ-------------DPREPLNRHIHVVFDLDNGMEL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDS-LSKKKITIKALLLDQS 179
+ D R+F ++ +L + LGP+ +P+ E+ + L +KK +K++LLDQS
Sbjct: 105 RYMDTRKFGRMEVLPKELDLKNFHGLGPEPF-DPIFDSEYVYAFLKRKKAPLKSVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+++GIGN ADE+L + I P +A LSK+ C L++ ++E+
Sbjct: 164 FVAGIGNIYADEILAKIGIRPKMSARRLSKKKCEALVEAVQEI 206
>gi|422479949|ref|ZP_16556353.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA1]
gi|313825875|gb|EFS63589.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA1]
Length = 256
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LWL LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWLILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|452856557|ref|YP_007498240.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080817|emb|CCP22582.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 276
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|421858164|ref|ZP_16290440.1| formamidopyrimidine-DNA glycosylase [Paenibacillus popilliae ATCC
14706]
gi|410832266|dbj|GAC40877.1| formamidopyrimidine-DNA glycosylase [Paenibacillus popilliae ATCC
14706]
Length = 280
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + GK I + + + + +F ++ G I R+GK
Sbjct: 1 MPELPEVETVKRTLHTLAAGKTIERVTVTLPRIIQRPANIEEFCDALSGHTIEQVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD G+T +++ R + T E K++ L DG EL
Sbjct: 61 FLRILLD---------GLTLVSHLR-----MEGRYGLFQTGEPVEKHTHVIFHLTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S+PP+ +LG + L E T D L K++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFRRGEEWSMPPLQKLGVEPLSEQFTPDVLIALLRKRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
++GIGN DE L++A IHPL+ A L+ L + I E EA G S++ Y
Sbjct: 167 HVVAGIGNIYVDEALFRAGIHPLRPANELTDAEYVRLHEAIVATLTEAIEAGGSSIKSY 225
>gi|429088712|ref|ZP_19151444.1| Formamidopyrimidine-DNA glycosylase [Cronobacter universalis NCTC
9529]
gi|426508515|emb|CCK16556.1| Formamidopyrimidine-DNA glycosylase [Cronobacter universalis NCTC
9529]
Length = 269
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|386005789|ref|YP_005924068.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB423]
gi|380726277|gb|AFE14072.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB423]
Length = 289
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL LD+ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLDTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|392977007|ref|YP_006475595.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392322940|gb|AFM57893.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 269
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWAKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|373464489|ref|ZP_09556027.1| DNA-formamidopyrimidine glycosylase [Lactobacillus kisonensis
F0435]
gi|371762410|gb|EHO50941.1| DNA-formamidopyrimidine glycosylase [Lactobacillus kisonensis
F0435]
Length = 280
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 29/256 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E +G KI K++ K I + +DFE ++ K I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVVGSKI-KAVDVLYEK-IGNLPKADFEQALRNKIIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK---DTDEWP-SKYSKFFVELDD 116
L +R+ G+ + + R K + D P K++ L D
Sbjct: 59 YLLIRISG-----------------GLTIVSHLRMEGKYDVEPDGVPIGKHTHVIFYLTD 101
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F ++ L++ +V + +GP+ +T+D +K K +K
Sbjct: 102 GRELRYNDSRKFGRMNLVDTGQEMTVAGLKTIGPEPTDHDLTIDYMKTIFAKSKKMVKPF 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSL 230
LLDQS I+G+GN ADEVL+ +KIHP Q ++ + L I E+++A+ G ++
Sbjct: 162 LLDQSKIAGLGNIYADEVLWLSKIHPEQPVNLITADEIERLRHNIITEIQKAIAGHGTTV 221
Query: 231 QFYKCYFAKPYVHKKH 246
Y + + + H
Sbjct: 222 HSYSNAYGEAGEFQNH 237
>gi|325000485|ref|ZP_08121597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudonocardia sp. P1]
Length = 280
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 25/237 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H + +++ + V + S DF A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLADHVLDRRVAAVEVLHPRAVRRHPTGSADFTARLTGRTLRAAARRG 60
Query: 60 KNLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
K LWL LD+ GM+G + V+D E K+ + + D
Sbjct: 61 KYLWLELDTAEAGDDALLAHLGMSGQML-------------VEDPAEPDEKHLRVRLRFD 107
Query: 116 D-GLELSFTDKRRFAKVRLLN-DPTS----VP-PISELGPDALLEPMTVDEFTDSLSKKK 168
D G EL F D+R F + + P S +P P++ + D + + D+ +L +++
Sbjct: 108 DDGPELRFVDQRTFGGLSVHPLAPASGGGLLPEPVAHIARDPMDPAFSADDTVAALRRRR 167
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+K LLDQ+ +SGIGN ADE L++A++H L+ L++ +L V A
Sbjct: 168 TEVKRALLDQTVVSGIGNIYADEALWRARLHGLRPTEKLTRAQGHAVLDAATTVMTA 224
>gi|430749586|ref|YP_007212494.1| formamidopyrimidine-DNA glycosylase Fpg [Thermobacillus composti
KWC4]
gi|430733551|gb|AGA57496.1| formamidopyrimidine-DNA glycosylase Fpg [Thermobacillus composti
KWC4]
Length = 310
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE R + GK I +++ ++I + F A++ G+ I S R+G
Sbjct: 1 MPELPEVETVARTLNALVAGKTI-RAVTVRLPRIIQRPEEPEAFAAALEGRTIRSIGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L LD + + ++G R +V DE K++ L DG +
Sbjct: 60 KFLRFVLDD-------LVLVSHLRMEG-------RYSVCPADEPIEKHTHVLFHLTDGTD 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + PP+S+LG + L + TV+ L +K IK LLL+
Sbjct: 106 LRYKDVRQFGTMHLFRPGEEFEQPPLSKLGMEPLDDAFTVEALRKLLGGRKAPIKPLLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL---GVSLQFY 233
Q+Y++G+GN DE L++A IHP + A SL L I+E +REA+ G S++ Y
Sbjct: 166 QAYVTGLGNIYVDESLHKAGIHPERPASSLRAAEWTRLHASIRETLREAVDAGGSSVRSY 225
>gi|421844852|ref|ZP_16278008.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411773715|gb|EKS57243.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 269
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S KA+LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DKAVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICR 253
KP + RE + CR
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR 245
>gi|440285591|ref|YP_007338356.1| formamidopyrimidine-DNA glycosylase Fpg [Enterobacteriaceae
bacterium strain FGI 57]
gi|440045113|gb|AGB76171.1| formamidopyrimidine-DNA glycosylase Fpg [Enterobacteriaceae
bacterium strain FGI 57]
Length = 269
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +II + SD + K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIQYAIIRNGRLRW---PVSDEIHRLSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNAEYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + CA L+ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSPQECALLVSTIKAV 205
>gi|227503343|ref|ZP_03933392.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC
49725]
gi|227075846|gb|EEI13809.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC
49725]
Length = 271
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADD--NKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ R +E + +GK+I IA N+ D ++GK I +A R+
Sbjct: 1 MPELPEVESVRHGVESYVVGKEITSVDIAHPRANRGQD----EPLAGLIVGKEIAAAARR 56
Query: 59 GKNLWLR-LDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL + P S GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIG-------------HTD---SPHRRIT 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
V L D EL F D+R F L P S IS +G D L + L KKK +
Sbjct: 101 VVLSDATELHFVDQRTFGY--WLYAPWST--ISHIGLDPLEPDFDIASAARRLRKKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
K LLDQ+ +SGIGN ADE L+ A+I P + A +L ++ LL + V A
Sbjct: 157 KTALLDQTLVSGIGNIYADEALWAARISPRKKASALRQKDAVALLAAAQTVMSA 210
>gi|386841414|ref|YP_006246472.1| hypothetical protein SHJG_5331 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101715|gb|AEY90599.1| hypothetical protein SHJG_5331 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794709|gb|AGF64758.1| hypothetical protein SHJGH_5095 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 262
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR +E C +++ ++ D V+ GV ++ G+ R GK
Sbjct: 1 MPELPDVEGFRRVLET-CATGRVIHRVVVRDAGVLHGVGPCGLRDALEGRRFTEPERHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P FGMTG R D D+ Y + L G +L
Sbjct: 60 WLLAHTGDGPTVLLHFGMTG-------------RLVCGDPDDAVEPYDRVLFTLSGGRQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D+R+ + L +D + + GPDAL ++ EF +L+ ++ +K L DQS
Sbjct: 107 RYRDQRKLQGLWLAHDDCEIARRLERQGPDALA--VSRQEFETALASRRGHVKTALTDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
++G+GN +ADE+L++A++ P + A L++
Sbjct: 165 VLAGLGNLLADEILWRARLRPDRRASGLAQ 194
>gi|260428860|ref|ZP_05782837.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45]
gi|260419483|gb|EEX12736.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45]
Length = 283
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 13/240 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I K+++ + + + G + R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMEGNTIAKALV--NRPDLRWPFPERMAERLTGARVERLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GMTG + + G A+ ++ V D P K+ ++L DG +
Sbjct: 59 YILGDLDSGETLLIHLGMTGRMLVSGDALGRF----VHD-HPAPEKHDHVVLDLADGARI 113
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T+ P ++ LGP+ L + +LS + + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMNLMPTATAEQHPLLAALGPEPLGNAFSESHLMAALSGRTMPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN E LY+ IHP + +S + A+L+ I++V E A G SL+ ++
Sbjct: 174 KIVAGLGNIYVCEALYRCGIHPGRRVSRISAKRIASLVPVIRQVLEEAIAAGGSSLRDFR 233
>gi|268319915|ref|YP_003293571.1| hypothetical protein FI9785_1445 [Lactobacillus johnsonii FI9785]
gi|262398290|emb|CAX67304.1| mutM [Lactobacillus johnsonii FI9785]
Length = 276
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTISKIIIWYPKIIVN--DPDEFVKKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + + D+ K+ DG L
Sbjct: 59 YLLFR--------FNDGLTMVSHLR-----MEGKYHLVTPDQPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+Q+KIHPL +A S+ + L I
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHT 209
>gi|334881705|emb|CCB82605.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus MP-10]
gi|339636945|emb|CCC15772.1| formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus IG1]
Length = 274
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 36/268 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDN----KVIDGVSASDFEASVLGKAILSA 55
MPELPEVE RR + ++VK + IAD + K+I+ + F+ ++ + I +
Sbjct: 1 MPELPEVETVRRGL------NRLVKGATIADIDVYWPKIINN-DVALFKQRLINQTIQTI 53
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L R F G+T +++ + V E K++ L
Sbjct: 54 DRRGKYLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEARDKHTHVVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
D +L + D R+F ++ L+ + SV + +GP+ + + +T+ T +L K IK
Sbjct: 101 DDRDLLYNDTRKFGRMTLVPTGEELSVAGLRTIGPEPVADQLTLAYLTATLEHSKKMIKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVS 229
LLLDQS I+GIGN ADE L+ +KIHP++ A SL+ + ATL I E+ A+ G +
Sbjct: 161 LLLDQSKIAGIGNIYADETLWMSKIHPMRPANSLTADEIATLRDNIITEMALAIKGHGTT 220
Query: 230 LQFYKCYFA-----KPYVHKKHRENKIC 252
+ + F + ++H RE + C
Sbjct: 221 VHSFSTAFGEAGQFQNHLHVYGREGEPC 248
>gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262]
gi|21362544|sp|Q92BF1.3|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262]
Length = 273
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+HP + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTY 224
>gi|223932651|ref|ZP_03624650.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591]
gi|386583670|ref|YP_006080073.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D9]
gi|223898621|gb|EEF64983.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591]
gi|353735816|gb|AER16825.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D9]
Length = 297
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 116/244 (47%), Gaps = 30/244 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 23 LPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 81 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 122
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 123 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSH 182
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSL 230
LLDQS ++G+GN DEVL++AK+HP QT+ LS E A L + EV E G ++
Sbjct: 183 LLDQSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSAEQVADLRQATIEVLQLGIEKGGSTI 242
Query: 231 QFYK 234
+ YK
Sbjct: 243 RTYK 246
>gi|159036824|ref|YP_001536077.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205]
gi|189044672|sp|A8M661.1|FPG_SALAI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|157915659|gb|ABV97086.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205]
Length = 287
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ + + G++I + + + A+ F ++G + R+G
Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ A V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPGAAPDEAHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D L + F +L +++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSAGGAEMPTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+ +SG+GN ADE L++A++H + A L+ + L+ + VR+ LG +++ F
Sbjct: 169 TLLSGVGNIYADEALWRARLHGARPADGLTGPAA---LRLLGHVRDVLGEAIKEGGTSFD 225
Query: 239 KPYVH 243
YV+
Sbjct: 226 ALYVN 230
>gi|357022644|ref|ZP_09084868.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium thermoresistibile ATCC 19527]
gi|356477633|gb|EHI10777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium thermoresistibile ATCC 19527]
Length = 286
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + V +D A ++ I R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVTGRAVAAVRVHHPRAVRRHEAGPADLTARLVDARITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLDDGAEALVVHLGMSGQMLLGPVPNENHLRIAAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F + + + + VP P+ L D L D L K IK
Sbjct: 106 TLSFVDQRTFGGWMIADMVTVEGSEVPAPVVHLARDPLDPLFDRDAVVTVLRGKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
LLDQ+ +SGIGN ADE L++A+I+ +TA +L++ LL +V REAL
Sbjct: 166 QLLDQTVVSGIGNIYADEALWRARINGARTASALTRRRLGELLDAAADVMREAL 219
>gi|357410944|ref|YP_004922680.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC
33331]
gi|320008313|gb|ADW03163.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC
33331]
Length = 285
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V ++ +DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LW+ LD GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWVPLDEADSSLLGHLGMSGQLL-------------VQPEDAVDEKHLRIRIRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL F D+R F + L N P +P I+ + D L F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
LLDQS ISG+GN ADE L+++++H + SL++ A LL ++ V REAL
Sbjct: 168 LLDQSLISGVGNIYADEALWRSRLHYERPTASLTRPRTAELLGHVRAVMREAL 220
>gi|260599932|ref|YP_003212503.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter turicensis z3032]
gi|429102416|ref|ZP_19164390.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis 564]
gi|260219109|emb|CBA34464.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis z3032]
gi|426289065|emb|CCJ90503.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis 564]
Length = 269
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|302537166|ref|ZP_07289508.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
gi|302446061|gb|EFL17877.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
Length = 289
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V ++ DF A + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVAAVEVLHPRAVRRHLAGGPDFAARLAGQTIGVPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L+ GM+G + ++ DE + F + D G
Sbjct: 61 KYLWLPLEGRDLSVLGHLGMSGQLLVQ----------PADAPDEKHLRIRLRFAD-DTGT 109
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLSKKKI 169
EL F D+R F + L +VP +E PD + L+P+ DE + +L K+
Sbjct: 110 ELRFVDQRTFGGLSLHE---TVPGSAEGLPDVIAHIARDPLDPL-FDEGAYHLALRAKRT 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
T+K LLDQS ISG+GN ADE L++A++H + +L++ A LL ++EV A
Sbjct: 166 TVKRALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRSAELLTHVREVMNA 221
>gi|354580240|ref|ZP_08999145.1| formamidopyrimidine-DNA glycosylase [Paenibacillus lactis 154]
gi|353202671|gb|EHB68120.1| formamidopyrimidine-DNA glycosylase [Paenibacillus lactis 154]
Length = 277
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE +R + + I K + + + ++I D A +L G I R+G
Sbjct: 1 MPELPEVETVKRTLNQ-LIKGKYIDHVTVNLPRIIQRPDDVDAFAFMLKGHTIEGVERRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + LD G + + + + R + DE K++ DG E
Sbjct: 60 KFLRILLD------------GLVLVSHLRME--GRYGLYRKDEPVEKHTHVIFHFSDGTE 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + + PP+S+LG + L + +T D F + + KK IKA+LL+
Sbjct: 106 LRYKDVRQFGTMHLFAPGEEFNHPPLSKLGYEPLDDTLTPDTFKEVIGSKKTKIKAVLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQFY 233
Q+Y+ GIGN DE L++A IHP A L + + L I E EA G S++ Y
Sbjct: 166 QAYVVGIGNIYVDESLFRAGIHPEIPANKLGDDELSRLYHSIVATLSEAVEAGGSSIKSY 225
>gi|146319050|ref|YP_001198762.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|146321256|ref|YP_001200967.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33]
gi|386578232|ref|YP_006074638.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis GZ1]
gi|145689856|gb|ABP90362.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|145692062|gb|ABP92567.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33]
gi|292558695|gb|ADE31696.1| Formamidopyrimidine-DNA glycolase [Streptococcus suis GZ1]
Length = 297
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 24/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 23 LPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L S M G +Y A D+ P+ K+ F DG
Sbjct: 81 YLLIYLTDHVLIS-HLRMEG----------KYNFFA----DQVPANKHFHAFFTFIDGST 125
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D + ++GP+ E ++EF L+K K IK+ LLD
Sbjct: 126 LVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLD 185
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
QS ++G+GN DEVL++AK+HP QT+ LS + A L + EV E G +++ Y
Sbjct: 186 QSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTY 245
Query: 234 K 234
K
Sbjct: 246 K 246
>gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638]
gi|166988461|sp|A4W514.1|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638]
Length = 269
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + S+ ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSNEIHTLSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS++ C L+K IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEQECEILVKVIKAV 205
>gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|238689009|sp|B1VYY1.1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 286
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LW+ +D GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLL-------------VRPADAPDEKHLRIRMRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRL-LNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHANTPDGLPETIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ A LL ++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNA 218
>gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces griseus
XylebKG-1]
gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces griseus
XylebKG-1]
Length = 286
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LW+ +D GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLL-------------VRPADAPDEKHLRIRMRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRL-LNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHANTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ A LL ++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNA 218
>gi|213964684|ref|ZP_03392884.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum
SK46]
gi|213952877|gb|EEB64259.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum
SK46]
Length = 287
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 33/258 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE+ RR ++ + +G +I S + + V A++F G+ ++++ R+G
Sbjct: 1 MPELPEVESVRRGLDTYVVGGRIDDSFVYNARAVRRQPGGAAEFIGRTRGRTVVASDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTG-----AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K +WL LD + GM+G A Y ++ R+A F + L
Sbjct: 61 KFMWLTLDDDSAIAIHLGMSGQLRVEAPYTPNTLSGRHTRAA-------------FDIAL 107
Query: 115 DDGLE--LSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVD--EFTDSLS 165
DG ++F D+R F V S VP P +++ PD LLEP TVD +
Sbjct: 108 PDGARHLINFNDQRTFGWVWACELVESHGRFVPEPAAKIAPD-LLEP-TVDVVALAHRMM 165
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
K + IKA+LL+Q+ +SGIGN ADE+L+ AK+ A LS A LL +E +
Sbjct: 166 KSRSPIKAVLLNQNIVSGIGNIYADEMLWAAKVDGRVPACDLSVRRLAKLL---REGQSV 222
Query: 226 LGVSLQFYKCYFAKPYVH 243
L +L F YVH
Sbjct: 223 LERALAAGGTSFDALYVH 240
>gi|283836014|ref|ZP_06355755.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC
29220]
gi|291068196|gb|EFE06305.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC
29220]
Length = 269
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTTELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECGLLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRI 246
>gi|310816813|ref|YP_003964777.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare
Y25]
gi|385234411|ref|YP_005795753.1| DNA glycosylase [Ketogulonicigenium vulgare WSH-001]
gi|308755548|gb|ADO43477.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare
Y25]
gi|343463322|gb|AEM41757.1| DNA glycosylase [Ketogulonicigenium vulgare WSH-001]
Length = 286
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 13/240 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + + + + D + GK +LS R+ K
Sbjct: 1 MPELPEVETVRRGLLPVMEGQVIAAADVRRPD--LRWPFPPDMAQRLTGKRVLSLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GM+G + I GV + +Y+ + P K+ +++ G +
Sbjct: 59 YILADLDSAETLLIHLGMSGRMLISGVMIGEYEHARA-----LPEKHDHVVLDMAGGARI 113
Query: 121 SFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ D P I+ LGP+ + L+ +K IK+ LLDQ
Sbjct: 114 AFNDARRFGAMDLMATDAVDQNPLIAVLGPEPFGNDFSPAYLAARLAGRKTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN EVL++A+IHP + A L+ L+ I++V + A G SL+ Y+
Sbjct: 174 HIVAGLGNIYVCEVLFRARIHPARLAGDLTALEADRLVPLIRDVLDEAIRAGGSSLRDYQ 233
>gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
Length = 288
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 124/275 (45%), Gaps = 40/275 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I + V + S D + G+ ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL L+ PS GM+G + ++ V DE K+ + L
Sbjct: 61 KYLWLVLE----PSSVAIVVHLGMSGQMLVQDPTVP----------DE---KHLRIRARL 103
Query: 115 DDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKI 169
+ G++L F D+R F L + D T VP ++ + D L D +L K
Sbjct: 104 ESGIDLRFVDQRTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHT 163
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR------ 223
IK LLDQ+ +SG+GN ADE L++A+IH + LS LL ++V
Sbjct: 164 EIKRALLDQTVVSGVGNIYADEALWRAEIHGNRPTDKLSGPRLRVLLDAARDVMTEALDQ 223
Query: 224 -----EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
+AL V++ YF + ++ +EN CR
Sbjct: 224 GGTSFDALYVNVNGQSGYFDR-SLNAYGQENLPCR 257
>gi|385826322|ref|YP_005862664.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii DPC
6026]
gi|417838012|ref|ZP_12484250.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii pf01]
gi|329667766|gb|AEB93714.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii DPC
6026]
gi|338761555|gb|EGP12824.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii pf01]
Length = 276
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE +R + GK I K II +++ + +F + K IL R GK
Sbjct: 1 MPEMPEVETVKRTLTPLVKGKTIAKIIIWYPKIIVN--NPDEFVEKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + + D K+ DG L
Sbjct: 59 YLLFRF------SDDLTMVSHLRMEG-------KYHLVTPDHPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+Q+KIHPL +A S+ + L I
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHT 209
>gi|345011428|ref|YP_004813782.1| formamidopyrimidine-DNA glycosylase catalytic domain-containing
protein [Streptomyces violaceusniger Tu 4113]
gi|344037777|gb|AEM83502.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Streptomyces violaceusniger Tu 4113]
Length = 262
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 20/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + G ++ + +AD V+ GV+A + + G+ + R GK
Sbjct: 1 MPELPDVEGFRRTLASCAQGHRVERVEVADAG-VLHGVTAQRLKRDLEGRRFAAPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D P FGMTG R A E ++ + +LDDG L
Sbjct: 60 WLIAPTDGPTV-VVHFGMTG-------------RLACGAESEPAGRFERVAFDLDDGHRL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDAL-LEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D+R+ + L V I + GPDAL L +D L+ ++ +KA L DQ
Sbjct: 106 GYEDQRKLQGIWLAATEADVDRILGDQGPDALSLSRADLDRL---LAGRRGRVKATLTDQ 162
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ I+G+GN + DE+L++A+IHP + A +L+ + L ++EV
Sbjct: 163 AVIAGLGNLLGDEILWRARIHPQRPANALTDDEHERLHTAMREV 206
>gi|429112214|ref|ZP_19173984.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 507]
gi|426313371|emb|CCK00097.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 507]
Length = 269
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLVQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|419421600|ref|ZP_13961828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes PRP-38]
gi|422395436|ref|ZP_16475476.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL097PA1]
gi|327334307|gb|EGE76021.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL097PA1]
gi|379978091|gb|EIA11416.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes PRP-38]
Length = 280
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|148265694|ref|YP_001232400.1| formamidopyrimidine-DNA glycosylase [Geobacter uraniireducens Rf4]
gi|189044594|sp|A5G7Q9.1|FPG_GEOUR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|146399194|gb|ABQ27827.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
Length = 271
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + +GK+I + + + D ++ + G+ I + R+GK
Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLP--LQPDLDSILSGRIISAVERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GMTG + + D P ++ + L+ GL L
Sbjct: 59 YLLVRFTAGTL-ILHLGMTGNLRLV-------------QADTPPGRHDHLDLVLNSGLCL 104
Query: 121 SFTDKRRFAK-VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
TD RRF+ V +DP +++ GP+ L + D ++IT+K ++D
Sbjct: 105 RLTDPRRFSTIVWTHDDPLRHTLLAKHGPEPLTGDFSGDYLYTKSRGRRITVKQFIMDSR 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN A E L++A IHP A +LS C L IKEV
Sbjct: 165 VLAGVGNIYACEALFRAGIHPETPAGALSTTHCLRLADTIKEV 207
>gi|339624120|ref|ZP_08659909.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Fructobacillus fructosus KCTC 3544]
Length = 276
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 22/246 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G IV+ + KV+ + F+ ++G I R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVKGA-IVRQVDVPYPKVVTS-DLTAFKHDLVGATIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G QY +V+ K+++ L+D +L
Sbjct: 59 YLLFRFSTNETMVSHLRMEG----------QY---SVEPEGAALHKHTETVFHLEDDRQL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L+ ++ +V + +LGP+ E +T+D + K +K+ LLD
Sbjct: 106 FYNDTRRFGRMTLVKTGDEMATVSGLKDLGPEPTEEDLTLDYMKEIFHKSHRVVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQFY 233
QS I+G+GN ADEVL+ KIHP T LS E A L + IKE+ A G ++ +
Sbjct: 166 QSKIAGLGNIYADEVLWMTKIHPETTTDKLSDEQLAELRQNIIKEINRATAHHGTTVHSF 225
Query: 234 KCYFAK 239
F +
Sbjct: 226 SNIFGE 231
>gi|84684525|ref|ZP_01012426.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667504|gb|EAQ13973.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus
HTCC2654]
Length = 283
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G +I ++ + + + + G +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMTGHRIARAEVRREG--LRWPFPERMAERLTGATVLGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS--KYSKFFVELDDGL 118
+ LD+ GM+G I I G + ++ E P+ K+ +++D G
Sbjct: 59 YILADLDTNETCLIHLGMSGRILISGTTLGKFHH-------EHPATEKHDHVVLDMDGGA 111
Query: 119 ELSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
++ D RRF + L T P I+ LGP+ L L+ K IK+ LL
Sbjct: 112 RITLNDARRFGVMDLFTTGTGDLHPLIAALGPEPLGNEFNEGYLIAKLAGKNTPIKSALL 171
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQF 232
DQ ++G+GN E LY+A IHP + A +S A+L+ I++V EA+ G SL+
Sbjct: 172 DQRIVAGLGNIYVCEALYRAGIHPARKAGRISAARIASLVPIIRDVLAEAIAAGGSSLRD 231
Query: 233 YK 234
Y+
Sbjct: 232 YR 233
>gi|427391734|ref|ZP_18885958.1| formamidopyrimidine-DNA glycosylase [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425731701|gb|EKU94514.1| formamidopyrimidine-DNA glycosylase [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 312
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 116/264 (43%), Gaps = 57/264 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ RR + +H G++I S+ N+VI A SV+G I + R+GK
Sbjct: 1 MPELPEVESVRRGLVQHAAGQRI-HSVQTFGNRVIRYAPAG--LQSVIGARIRAVARRGK 57
Query: 61 NLWLRLDSPP------------------FPSF----QFGMTGAIYIKGVAVTQYKRSAVK 98
LW LD PS GM+G Q++
Sbjct: 58 FLWFELDDAAGSWAGNASSAAGAADGCGGPSLALVAHLGMSG----------QFR----- 102
Query: 99 DTDEWPSKYSKFFVELDDGLELSFTDKRRF---AKVRLLNDP-------TSVPP-----I 143
D P ++ + + ++G L F D+R F A L+ P S P I
Sbjct: 103 -VDSEPERHLRARLLFENGTRLDFIDQRTFGYLAPAALVPTPDGDRGGEGSTGPYIPANI 161
Query: 144 SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQT 203
+ D L + V EF +L K +K LLDQ+ ISG+GN ADE L++A IHP Q
Sbjct: 162 VHIARDVLDPALNVPEFERALGAKCTAVKTALLDQTLISGVGNIYADEALFRAGIHPRQP 221
Query: 204 AVSLSKESCATLLKCIKEV-REAL 226
A +L LL + EV REAL
Sbjct: 222 ASTLKMVEITRLLDALGEVLREAL 245
>gi|306831910|ref|ZP_07465065.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304425836|gb|EFM28953.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 296
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 24 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVAFETEILGQTFQNIGRR 79
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L L+ S M G + V +K+ +LDDG
Sbjct: 80 GKYLLLMLNKQVIIS-HLRMEGKYLLFPEQVPD-------------NKHFHVLFQLDDGS 125
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + LL N + +LGP+ E + EFT L K IK LL
Sbjct: 126 TLVYQDVRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLL 185
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVS 229
DQ+ + G+GN DE L+ AKIHP + ++SL+ A L I + + LG+S
Sbjct: 186 DQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALLHDEIIRILQ-LGIS 237
>gi|290969142|ref|ZP_06560667.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1
str. 28L]
gi|290780648|gb|EFD93251.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1
str. 28L]
Length = 280
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +G +IV+ + N V+ + F V+GK I R+GK
Sbjct: 1 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPN-VLKNTTVPGFRNRVVGKRIEGLVRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L MTG + R A+++ ++ + L GL L
Sbjct: 60 YLQFLLSGEQAVLVHLRMTGKLLY---------RPALQEEPR-----ARLRLHLQKGL-L 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F L+ PT VP LGPDA E T L+ KK IKALLLDQ
Sbjct: 105 VYEDVRTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ A I P + A ++S+ L I V
Sbjct: 165 HVVAGLGNIYVDEALFAAHIRPDRQAATISRTEVGKLHAAIGRV 208
>gi|394991802|ref|ZP_10384600.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. 916]
gi|393807347|gb|EJD68668.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. 916]
Length = 276
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELNALPLSQLGPEPDDEAFTAAYLKERLVKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|385678565|ref|ZP_10052493.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Amycolatopsis sp. ATCC 39116]
Length = 287
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + + + DF + G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVAGRGIARVEVLHPRAIRRHELGPEDFTGRLAGARVEAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG-L 118
K LWL L GM+G + ++ DE K+ + + DDG
Sbjct: 61 KYLWLELSDKEAILAHLGMSGQMLVQPEGAP----------DE---KHLRVRIRFDDGGP 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
EL F D+R F + L + D T +P PI+ + D + + +L ++ IK
Sbjct: 108 ELRFVDQRTFGGLALADLVTSDGTLLPAPIAHIARDPMDPAFDPAQAVKALRSRRTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ+ +SG+GN ADE L++A++H + L++ A +L+ EV
Sbjct: 168 ALLDQTLVSGVGNIYADESLWRARLHWARPTEKLTRAQGAAVLEAATEV 216
>gi|311113799|ref|YP_003985021.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC
17931]
gi|310945293|gb|ADP41587.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC
17931]
Length = 332
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 60/268 (22%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G I + I D+ + + S DF + I A+R+G
Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVRILDERSIRRHIGGSADFTTCLERTRIRGAYRRG 60
Query: 60 KNLWLRLDSP---PFPS--------------FQFGMTGAIYIKGVAVTQYKRSAVKDTDE 102
K +WL L +P PFP GM+G + +K T E
Sbjct: 61 KYMWLTLSAPEDEPFPKRGDSDDTLLPYALVIHLGMSGQLLVK--------------TPE 106
Query: 103 WPS-KYSKFFVELD--DG------LELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALL 152
+P+ K+ K +EL+ DG EL F D+R F + L N +P S G + +
Sbjct: 107 FPAEKHLKIVLELEPADGESTNKATELRFVDQRIFGGMFLSNLVPDIPAGTSSAGAEEIS 166
Query: 153 EPMTVDEFTDSLSKKKI------------------TIKALLLDQSYISGIGNWVADEVLY 194
E V E + + + + IK LLLDQS +SGIGN ADE L+
Sbjct: 167 EEFLVPEAVEHIGRDPVDPSFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALW 226
Query: 195 QAKIHPLQTAVSLSKESCATLLKCIKEV 222
+A+IH + A SLS L + +V
Sbjct: 227 RARIHYAKPAKSLSAAQTRELFAAVHQV 254
>gi|295836306|ref|ZP_06823239.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74]
gi|295825948|gb|EFG64563.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74]
Length = 284
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V V+ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL LD GM+G + ++ A K+ + + DD
Sbjct: 61 KYLWLPLDGAGEAVLAHLGMSGQLLVQPHAAPA-------------EKHLRLRIGFDDAL 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L P I+ + D L +P+ D F +L +K+ IK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTAIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA-------- 225
LLDQS ISG+GN ADE L++A++H + SL++ LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTASLTRPRTDELLGHVRDVMNAALAVGGTS 226
Query: 226 ---LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 227 FDSLYVNVNGESGYFDRS-LDAYGREDEPCR 256
>gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL
11379]
gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
roseosporus NRRL 15998]
gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
roseosporus NRRL 15998]
Length = 286
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LW+ P + G + + G + V+ D K+ + + DD G
Sbjct: 61 KYLWV-----PIEEASASLLGHLGMSGQLL-------VQPADAPDEKHLRIRMRFDDALG 108
Query: 118 LELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKAL 174
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 109 TELRFVDQRTFGGLSLHDNTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V A
Sbjct: 168 LLDQSLISGVGNIYADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNA 218
>gi|294631624|ref|ZP_06710184.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
gi|292834957|gb|EFF93306.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
Length = 289
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 40/243 (16%)
Query: 4 LPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKGKNL 62
+PEVE RR +E + + + + V ++ DF ++G + + R+GK L
Sbjct: 1 MPEVEVVRRGLERWVAQRTVAEVAVLHPRAVRRHLAGPDDFARRLIGHRVGTPSRRGKYL 60
Query: 63 WLRL-DSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
WL L DS GM+G + + + A ++ R V+ DE DG E
Sbjct: 61 WLPLADSDQAILAHLGMSGQLLVQPREAAAEKHLRIRVRFADE-------------DGTE 107
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-----------LEPMTVDE-FTDSLSKK 167
L F D+R F + L E GPD L L+P+ DE F +L +K
Sbjct: 108 LRFVDQRTFGGLSL----------HETGPDGLPDVIAHIARDPLDPLFDDEAFHRALRRK 157
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+ TIK LLDQS ISG+GN ADE L++A++H + +L++ A LL +++V EAL
Sbjct: 158 RTTIKRALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTAELLGHVRDVMNEAL 217
Query: 227 GVS 229
V
Sbjct: 218 AVG 220
>gi|169348424|ref|ZP_02866362.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552]
gi|169293893|gb|EDS76026.1| DNA-formamidopyrimidine glycosylase [Clostridium spiroforme DSM
1552]
Length = 270
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 53/286 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK------SIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE RR ++ + K+I+ II DD +F+ V + I
Sbjct: 1 MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDD--------IEEFKNKVCNQVIND 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L +LD F S M G + + DE +K+ L
Sbjct: 53 IDRIGKFLIFKLDDVAFVS-HLRMEGKYH-------------YVNRDEPLNKHDHIVFNL 98
Query: 115 DDGLELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
DDG +L + D R+F +++L L++ + P+S+LGP EP DE + L K +
Sbjct: 99 DDGKQLRYNDTRKFGRMKLVSLDNYANELPLSKLGP----EPFYADEKKLYEKLHKCNLP 154
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL--- 226
IK LLDQS I+GIGN A+E+ + + P A L+K+S L++ + EA+
Sbjct: 155 IKHALLDQSIIAGIGNIYANEICFAMGLDPYTPASKLTKKSVKELIEVASSILNEAIKQG 214
Query: 227 GVSLQFYKCYFAKPYVHKKHRENKICRLFKVRLKLMLTAAAFLLNG 272
G ++ + N I LF+V+LK+ L + G
Sbjct: 215 GTTIHSFSA-------------NGIDGLFQVKLKVHLQKKCSICGG 247
>gi|169831563|ref|YP_001717545.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638407|gb|ACA59913.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis
audaxviator MP104C]
Length = 276
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G + ++ + KV+ + +F + G+ IL R+GK
Sbjct: 1 MPELPEVETIVRDLGARLTGLMVERAEVLLP-KVVAAPAPEEFARLIAGRKILGLSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L MTG + V + +P K++ + LD G+ L
Sbjct: 60 YILIELSRGWVLILHLRMTGQLVYTTV------------LEPFP-KHTHLVLHLDQGV-L 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F + L+ + VP + ELG + L ++F L++ + IK LLLDQ
Sbjct: 106 RFTDLRQFGRASLVPAREVRRVPGLRELGVEPLGAEFVKEDFIRKLARSRRMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFY 233
++++G+GN DE L++A IHP + A L TL + I+EV E + G S+Q Y
Sbjct: 166 TFLTGLGNIYTDEALHRAGIHPERRAADLDTREAGTLYRAIREVLAEGVAFRGTSVQHY 224
>gi|385992183|ref|YP_005910481.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CCDC5180]
gi|385995809|ref|YP_005914107.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CCDC5079]
gi|424948564|ref|ZP_18364260.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
NCGM2209]
gi|449065004|ref|YP_007432087.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium bovis BCG
str. Korea 1168P]
gi|339295763|gb|AEJ47874.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CCDC5079]
gi|339299376|gb|AEJ51486.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CCDC5180]
gi|358233079|dbj|GAA46571.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
NCGM2209]
gi|449033512|gb|AGE68939.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium bovis BCG
str. Korea 1168P]
Length = 306
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 18 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 77
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 78 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 123
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 124 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 181
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 182 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 241
Query: 226 L 226
L
Sbjct: 242 L 242
>gi|407935864|ref|YP_006851506.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes C1]
gi|407904445|gb|AFU41275.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes C1]
Length = 256
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|384266457|ref|YP_005422164.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387899497|ref|YP_006329793.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens Y2]
gi|380499810|emb|CCG50848.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387173607|gb|AFJ63068.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens Y2]
Length = 278
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESAHIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
>gi|422413055|ref|ZP_16490014.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378]
gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378]
Length = 273
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+HP + A +LS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANTLSDKEINRIFEATKSIMTEAVALGGSTVRTY 224
>gi|374849527|dbj|BAL52540.1| formamidopyrimidine-DNA glycosylase [uncultured Chloroflexi
bacterium]
Length = 266
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 20/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G+ ++++ I S FE + G+ IL R+GK
Sbjct: 1 MPELPEVETIARNLRPILSGQ-CIRAVQVLWPGTIAEPSVQSFEQRLPGQTILEVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE- 119
L LRL I+++ Q+++ P K+ + + D E
Sbjct: 60 YLMLRLSRDLL---------LIHLRMSGDLQWRQHGAS-----PQKHDRVLF-IPDAAEV 104
Query: 120 -LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L+F D R+F +V L+ DP V + LGP+ L T + L + +K LLLDQ
Sbjct: 105 ILAFHDPRKFGRVWLVQDPEKV--LGGLGPEPLDAQFTSQALEERLRGRDRRLKPLLLDQ 162
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++++G+GN ADE L++A +HPL+ A L+ E + L + I++V
Sbjct: 163 TFLAGLGNIYADEALHRAGLHPLRVASELTGEEVSRLWQAIRQV 206
>gi|220933505|ref|YP_002512404.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254789453|sp|B8GUQ6.1|FPG_THISH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|219994815|gb|ACL71417.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 271
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR IE H G++ V S+I + ++ + G A LG+ + R
Sbjct: 1 MPELPEVETTRRGIERHVTGRR-VTSVIVREPRLRWPVPGDLAERLTGHTLGRVL----R 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L + +D+ GM+G++ + VT D K+ + LD G
Sbjct: 56 RAKYLLIEVDTGLL-LLHLGMSGSLRV----VT---------PDAPLRKHDHIDLCLDSG 101
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L D RRF V + P P+ +ELGP+ L + D S K+++ IK ++
Sbjct: 102 RCLRLHDPRRFGAVLWIEGPAHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIM 161
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN A E L+ A I P + A L++ CA L++ I++V
Sbjct: 162 NSHVVVGVGNIYASEALFLAGIRPGRAAGRLTRAECARLVETIRQV 207
>gi|16803604|ref|NP_465089.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes EGD-e]
gi|284801955|ref|YP_003413820.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578]
gi|284995097|ref|YP_003416865.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923]
gi|386050540|ref|YP_005968531.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-561]
gi|404284057|ref|YP_006684954.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2372]
gi|405758613|ref|YP_006687889.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2479]
gi|21362541|sp|Q8Y6W7.3|FPG_LISMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|16410993|emb|CAC99642.1| mutM [Listeria monocytogenes EGD-e]
gi|284057517|gb|ADB68458.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578]
gi|284060564|gb|ADB71503.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923]
gi|346424386|gb|AEO25911.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-561]
gi|404233559|emb|CBY54962.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2372]
gi|404236495|emb|CBY57897.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2479]
Length = 273
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + K K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTY 224
>gi|436840691|ref|YP_007325069.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169597|emb|CCO22968.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 274
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E +GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLSEALVGKTIESVKILNHSSVK--MPWYLFSSRVAGEEITRVHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + A + P +++ L DG +
Sbjct: 59 LLIMDLGEDLHITFHLKMTGRVLAHEGATS-------------PDTHTRLVFGLADGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L T + + +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQDWDFYRNLGPEPL--ETTAAALAERIEGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
S ++G+GN ADE L+++ IHP A LSK+S L ++ V
Sbjct: 164 SVVAGVGNIYADESLFRSGIHPKAKASDLSKDSLEKLFSEVQSV 207
>gi|433643117|ref|YP_007288876.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070008]
gi|432159665|emb|CCK56976.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070008]
Length = 289
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARISGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|242277525|ref|YP_002989654.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM
2638]
gi|259647331|sp|C6BUX8.1|FPG_DESAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|242120419|gb|ACS78115.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM
2638]
Length = 274
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSVK--MPWYLFSSRVAGEKITRIHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + T P +++ L DG +
Sbjct: 59 LLIMDLGDDLHITFHLKMTGRVLAHEGPTT-------------PEPHTRIVFGLTDGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L +T +E + ++ +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQEWDFYKNLGPEPL--EVTAEELAERITGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
S ++G GN ADE L+++ IHP A LS ES L+K E++ L ++Q
Sbjct: 164 SVVAGCGNIYADESLFRSGIHPKAKASDLSNES---LVKLFTELQAVLKQAIQ 213
>gi|350567555|ref|ZP_08935965.1| DNA-formamidopyrimidine glycosylase [Propionibacterium avidum ATCC
25577]
gi|348662626|gb|EGY79283.1| DNA-formamidopyrimidine glycosylase [Propionibacterium avidum ATCC
25577]
Length = 280
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVS--ASDFEASVLGKAILSAHR 57
MPELPEVE R +E I + + + D + G S A FE + G+ + +R
Sbjct: 1 MPELPEVETVRAGLEILVIPSVVERVDVVDVRGLRTTGGSEEARTFETILTGRQFTAINR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G Q++ V D + ++++ + L D
Sbjct: 61 RGKYLWFVLDDGTAMLAHLGMSG----------QFR---VVDREAPRHRHTRVVIGLGDD 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L VP P++ + PD + VDE L ++ TIK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDDVPGPVAHIAPDPFEDSFGVDEVARRLRARRSTIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +EV
Sbjct: 168 DQTLVSGIGNIYADETLWRVRRHPETPCSRLSQRKAVELLETAREV 213
>gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM
14469]
gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Marvinbryantia formatexigens
DSM 14469]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL EVE RR +E G+ + K ++ +V+ F +V G I R+GK
Sbjct: 27 MPELAEVEMIRRVLEPQLGGRTVTKLLVVRP-EVVAHPQTEQFAENVCGAVIERLCRRGK 85
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + + MTG + V D P KY++ + LDDG EL
Sbjct: 86 YLQIIFQNGSRAVVHLRMTGQLL-------------VLPADSPPEKYTQLVLSLDDGREL 132
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF + L ++P + + LGP+ E +T + + IK LL Q
Sbjct: 133 RFLDMRRFGRWWFLQKDEPDTFTGMQTLGPEPSDERLTAGYLREKAGASRKAIKDWLLCQ 192
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFY 233
Y++GIGN +DE+L+ A I+P + A SL+++ L E + ++QF+
Sbjct: 193 QYVAGIGNIYSDEILFAAGIYPGRGACSLTEKEWERLA-------EEIPRTMQFF 240
>gi|406977586|gb|EKD99714.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[uncultured bacterium]
Length = 284
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV + +H G I + I KVI G A F + G+ I R K
Sbjct: 1 MPELPEVFTITTDLNKHISGYTIESAKIVGGYKVIPGPKA--FTQGLSGQLITGVERIAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE- 119
N+ + L S MTG + +K + T + P ++++ ++L G +
Sbjct: 59 NIIINLASGNSLLVHLAMTGQVLLK------------ESTAKEP-RWTRVILKLTKGTDT 105
Query: 120 --LSFTDKRRFAKVRLLNDPTSVPPISELGPDAL--LEPMTVDEFTDSLSKKKITIKALL 175
L TD R F K+ L+N T ++ GPD + +EP V+EF + +KK +IK L
Sbjct: 106 KTLFLTDMRMFGKIALINPTTLTKLRAKYGPDPIQSIEPNPVEEFYLKVMQKKTSIKNAL 165
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
LDQ+ ISG+GN A + L+ A IHPL L++ + + L IK + +
Sbjct: 166 LDQTIISGVGNIYATDALFLAGIHPLTPTTKLTQNTLSKLFDKIKLILQ 214
>gi|375295256|ref|YP_005099523.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
KZN 4207]
gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
KZN 4207]
Length = 304
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 121
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 122 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 179
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 180 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 239
Query: 226 L 226
L
Sbjct: 240 L 240
>gi|408411094|ref|ZP_11182277.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 66c]
gi|407874757|emb|CCK84083.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 66c]
Length = 275
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I + + D ++ V + F+ + GK I R GK
Sbjct: 1 MPEMPEVETVRRTLTPLAAGKTIKRVDVWYDKVIVGDVKS--FQQQLKGKTIEKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S M G +Y+ + D K+ DG L
Sbjct: 59 YLLFRLGDLTIVS-HLRMEG----------KYRLTTA---DAPREKHEHLQFVFTDGSAL 104
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T V I LGP+AL T D F +L K IK LLLDQ
Sbjct: 105 RYDDVRKFGRLQLVETGTERIVTGIKHLGPEALSPEFTEDYFAKALKNKTKKIKNLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREA 225
+ ++G+GN DEVL+QAKI+P+ L+K+ L + I ++EA
Sbjct: 165 TVVAGLGNIYVDEVLWQAKINPVAEPKDLTKQQVQDLYEAINSTIKEA 212
>gi|395234046|ref|ZP_10412277.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. Ag1]
gi|394731412|gb|EJF31193.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. Ag1]
Length = 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILYAVVRNARLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------AEELPAEKHDHVDLIMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + +S LGP+ L + + + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWGKELEGSNVLSHLGPEPLSDTFSAEYLREKSAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP ++A SLSK+ TL+ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRSAQSLSKKESETLVAAIKAVLQRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRV 246
>gi|159045909|ref|YP_001534703.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12]
gi|189044587|sp|A8LNK8.1|FPG_DINSH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|157913669|gb|ABV95102.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12]
Length = 284
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 14/241 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G++I+++ I + + ++ + + GK IL R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPD--LRWPLPANMQTRLEGKRILRLARRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GM+G I I G A+ + K+ ++ D G +
Sbjct: 59 YILAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLE----KHDHVVLDFDTGARV 114
Query: 121 SFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
F D RRF + L + T + P ++ LGP+ L T L + IK+ LLD
Sbjct: 115 VFNDARRFGAMDLC-ETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLD 173
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
Q ++G+GN E L+QA I PL+ A +S+ A+L+ I+ V EA G SL+ Y
Sbjct: 174 QKVVAGLGNIYVCEALFQAGISPLRKAGRVSETRIASLVPIIRTVLGDAIEAGGSSLRDY 233
Query: 234 K 234
+
Sbjct: 234 R 234
>gi|451337402|ref|ZP_21907947.1| Formamidopyrimidine-DNA glycosylase [Amycolatopsis azurea DSM
43854]
gi|449419997|gb|EMD25508.1| Formamidopyrimidine-DNA glycosylase [Amycolatopsis azurea DSM
43854]
Length = 286
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + + + A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEAHVAGRTITDVEVLHARAIRRHELGAEDFSGRLSGTKITAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + ++ K V+ F D+G E
Sbjct: 61 KYLWLELSDGQAMLAHLGMSGQMLVQPDDAPDEKHLRVR------------FRFADNGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T++P I+ + D + +D+ +L ++ IK
Sbjct: 109 LRFVDQRTFGGLALAELTEVDGTALPGTIAHIARDPMDPRFDLDQAVRALRSRRTEIKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV A
Sbjct: 169 LLDQTLVSGIGNIYADEALWRSKLHWARPTDKLTAAHGRTVLTAAGEVMAA 219
>gi|379029252|dbj|BAL66985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
str. Erdman = ATCC 35801]
Length = 351
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 63 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 122
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 123 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 168
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 169 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 226
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 227 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 286
Query: 226 L 226
L
Sbjct: 287 L 287
>gi|154687040|ref|YP_001422201.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
FZB42]
gi|385265799|ref|ZP_10043886.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 5B6]
gi|154352891|gb|ABS74970.1| MutM [Bacillus amyloliquefaciens FZB42]
gi|385150295|gb|EIF14232.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 5B6]
Length = 278
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
>gi|149186671|ref|ZP_01864982.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21]
gi|148829579|gb|EDL48019.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21]
Length = 260
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R +E C+ + I + +D I+ + + A ++G+ R GK
Sbjct: 1 MPELPENEAQRLTLERECLHRTIEAVELGEDVTYIE-LPGDNERARLVGRQFTETRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N++ + P+ + GMTG + ++K + + L
Sbjct: 60 NIFAGSKTGPWMTVHLGMTGKLVPFDAPDDP-------------PDHTKLLIRFEGDRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++DP S LGPDAL ++ ++F + + IK+ L+ Q
Sbjct: 107 AFQCPRKLGHVRVIDDPASYLEDEGLGPDAL--EVSCEQFVQTFGSTRSAIKSALMKQDK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGN +DE L+Q IHP A +L ++ + + ++ +
Sbjct: 165 MAGIGNLWSDETLFQTGIHPEARANALGEDVLSDIHAAMRRI 206
>gi|409349128|ref|ZP_11232673.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus equicursoris CIP
110162]
gi|407878400|emb|CCK84731.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus equicursoris CIP
110162]
Length = 275
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I + + D ++ V + F+ + GK I R GK
Sbjct: 1 MPEMPEVETVRRTLTPLAAGKTIKRVDVWYDKVIVGDVKS--FQQQLKGKTIEKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S M G +Y+ + D K+ DG L
Sbjct: 59 YLLFRLGDLTIVS-HLRMEG----------KYRLTTA---DAPREKHEHLQFVFTDGSAL 104
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T V I LGP+AL T D F +L K IK LLLDQ
Sbjct: 105 RYDDVRKFGRLQLVETGTERIVTGIKHLGPEALSPEFTEDYFAKALKNKTKKIKNLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREA 225
+ ++G+GN DEVL+QAKI+P+ L+K+ L + I ++EA
Sbjct: 165 TVVAGLGNIYVDEVLWQAKINPVAEPKDLTKQQVQDLYEAINSTIKEA 212
>gi|289428678|ref|ZP_06430361.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165]
gi|295130990|ref|YP_003581653.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137]
gi|354607789|ref|ZP_09025757.1| formamidopyrimidine-DNA glycosylase [Propionibacterium sp.
5_U_42AFAA]
gi|386024411|ref|YP_005942716.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266]
gi|417930237|ref|ZP_12573616.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK182]
gi|422385609|ref|ZP_16465741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA3]
gi|422387744|ref|ZP_16467855.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA2]
gi|422393664|ref|ZP_16473714.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL099PA1]
gi|422425599|ref|ZP_16502533.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA1]
gi|422430652|ref|ZP_16507532.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA2]
gi|422449683|ref|ZP_16526407.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA3]
gi|422462689|ref|ZP_16539311.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL038PA1]
gi|422473636|ref|ZP_16550110.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL056PA1]
gi|422477337|ref|ZP_16553770.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL007PA1]
gi|422481391|ref|ZP_16557791.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA1]
gi|422485988|ref|ZP_16562345.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA2]
gi|422487460|ref|ZP_16563792.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA2]
gi|422491428|ref|ZP_16567742.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL020PA1]
gi|422497110|ref|ZP_16573387.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA3]
gi|422503315|ref|ZP_16579556.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA2]
gi|422505413|ref|ZP_16581643.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA2]
gi|422517359|ref|ZP_16593459.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL074PA1]
gi|422521168|ref|ZP_16597200.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL045PA1]
gi|422525754|ref|ZP_16601755.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA1]
gi|422528968|ref|ZP_16604943.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA1]
gi|422533757|ref|ZP_16609688.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA1]
gi|422536763|ref|ZP_16612666.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL078PA1]
gi|422551117|ref|ZP_16626912.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA3]
gi|422555476|ref|ZP_16631244.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA2]
gi|422560295|ref|ZP_16635985.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA1]
gi|422566756|ref|ZP_16642384.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA2]
gi|289158076|gb|EFD06296.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165]
gi|291377097|gb|ADE00952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137]
gi|313773587|gb|EFS39553.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL074PA1]
gi|313811638|gb|EFS49352.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA1]
gi|313822218|gb|EFS59932.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA1]
gi|313823549|gb|EFS61263.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA2]
gi|313831379|gb|EFS69093.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL007PA1]
gi|313834991|gb|EFS72705.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL056PA1]
gi|314924612|gb|EFS88443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA3]
gi|314962024|gb|EFT06125.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA2]
gi|314974254|gb|EFT18350.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA1]
gi|314976741|gb|EFT20836.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL045PA1]
gi|314978881|gb|EFT22975.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA2]
gi|314984442|gb|EFT28534.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA1]
gi|314986460|gb|EFT30552.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA2]
gi|314990819|gb|EFT34910.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA3]
gi|315081315|gb|EFT53291.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL078PA1]
gi|315083516|gb|EFT55492.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA2]
gi|315087197|gb|EFT59173.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA3]
gi|315089370|gb|EFT61346.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA1]
gi|315095394|gb|EFT67370.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL038PA1]
gi|327328344|gb|EGE70106.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA2]
gi|327329790|gb|EGE71546.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA3]
gi|327444128|gb|EGE90782.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA2]
gi|327444992|gb|EGE91646.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA1]
gi|327446475|gb|EGE93129.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA2]
gi|328752231|gb|EGF65847.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL020PA1]
gi|328760096|gb|EGF73675.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL099PA1]
gi|332675869|gb|AEE72685.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266]
gi|340772364|gb|EGR94868.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK182]
gi|353556335|gb|EHC25706.1| formamidopyrimidine-DNA glycosylase [Propionibacterium sp.
5_U_42AFAA]
gi|456738576|gb|EMF63143.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes FZ1/2/0]
Length = 256
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|401761655|ref|YP_006576662.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400173189|gb|AFP68038.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 269
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|375363319|ref|YP_005131358.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371569313|emb|CCF06163.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 278
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A+IHP A SLS TL IK+ ++EA+ + Y
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
>gi|338810641|ref|ZP_08622883.1| formamidopyrimidine-DNA glycosylase [Acetonema longum DSM 6540]
gi|337277386|gb|EGO65781.1| formamidopyrimidine-DNA glycosylase [Acetonema longum DSM 6540]
Length = 274
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 117/252 (46%), Gaps = 20/252 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H + K+I I +++ SA +F A VL K I RKGK
Sbjct: 1 MPELPEVETIRRNLESHIVDKQITAVDIFLP-RLVKWPSADEFRARVLKKKINRLERKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL MTG +YI A TD ++ + + LD L
Sbjct: 60 YLLLRLQGDITLIIHLRMTGQLYIA---------EAGHVTD----RFERIRLHLDSEEVL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++D R ++ D V + LGP+ L EP TV + IK+LLL+Q
Sbjct: 107 VYSDARTLGTWYVMPDHELGRVHGLESLGPEPLSEPFTVSYLAAIFRSRTGKIKSLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYK 234
I G+GN ADE L A I+P + A SL+ + L + I V +AL G + + Y+
Sbjct: 167 ELIGGLGNIYADESLALAGIYPERPANSLNSDELEALHQAINTVISQALQNAGTTFRDYR 226
Query: 235 CYFAKPYVHKKH 246
+ + ++ H
Sbjct: 227 NGYRQEGHNQHH 238
>gi|410657557|ref|YP_006909928.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. DCA]
gi|410660592|ref|YP_006912963.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. CF]
gi|409019912|gb|AFV01943.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. DCA]
gi|409022948|gb|AFV04978.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. CF]
Length = 273
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 31/245 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-----IDGVSASDFEASVLGKAILSA 55
MPELPEVE+ R ++ +GK I +D +V ++ DF A V + I S
Sbjct: 1 MPELPEVESIRLSLAARILGKTI------EDVEVRWLPAAVSLADEDFSALVRNRTIESL 54
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L + L F MTG R P K++ LD
Sbjct: 55 DRRGKYLLMNLSHGLTMIIHFRMTG-------------RLIYYPEQHEPDKHTHVVFRLD 101
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
G EL ++D R+F +++L++ + +++LGP+ L E D+ L++KK TIKA
Sbjct: 102 QG-ELHYSDIRKFGRIQLVSFKMAFKAACLAKLGPEPLDESFAFDQLGMRLARKKSTIKA 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVS 229
LLDQ+ ++GIGN ADE L++A I P + SL L I EV + A G S
Sbjct: 161 ALLDQTVVAGIGNIYADEALFRAGILPDRNTASLKVSEIILLYDAICEVLQEGITAGGTS 220
Query: 230 LQFYK 234
+ Y+
Sbjct: 221 FRDYR 225
>gi|420368537|ref|ZP_14869285.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1235-66]
gi|391322179|gb|EIQ78879.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1235-66]
Length = 269
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRN-GRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAAYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECGLLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRV 246
>gi|15610061|ref|NP_217440.1| Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium tuberculosis H37Rv]
gi|15842470|ref|NP_337507.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
CDC1551]
gi|31794101|ref|NP_856594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97]
gi|121638806|ref|YP_979030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662769|ref|YP_001284292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
H37Ra]
gi|148824114|ref|YP_001288868.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
F11]
gi|167969553|ref|ZP_02551830.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
H37Ra]
gi|224991298|ref|YP_002645987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|254233015|ref|ZP_04926342.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
C]
gi|254551998|ref|ZP_05142445.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289444480|ref|ZP_06434224.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
T46]
gi|289448590|ref|ZP_06438334.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CPHL_A]
gi|289571112|ref|ZP_06451339.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
T17]
gi|289575630|ref|ZP_06455857.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
K85]
gi|289746724|ref|ZP_06506102.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
02_1987]
gi|289751593|ref|ZP_06510971.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
T92]
gi|289755038|ref|ZP_06514416.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
EAS054]
gi|289759047|ref|ZP_06518425.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
T85]
gi|289763101|ref|ZP_06522479.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
GM 1503]
gi|298526394|ref|ZP_07013803.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium
tuberculosis 94_M4241A]
gi|306781123|ref|ZP_07419460.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu002]
gi|306785761|ref|ZP_07424083.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu003]
gi|306789801|ref|ZP_07428123.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu004]
gi|306794614|ref|ZP_07432916.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu005]
gi|306798858|ref|ZP_07437160.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu006]
gi|306804703|ref|ZP_07441371.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu008]
gi|306808896|ref|ZP_07445564.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu007]
gi|306968995|ref|ZP_07481656.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu009]
gi|307085636|ref|ZP_07494749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu012]
gi|339632931|ref|YP_004724573.1| formamidopyrimidine-DNA glycosylase [Mycobacterium africanum
GM041182]
gi|340627915|ref|YP_004746367.1| putative formamidopyrimidine-DNA glycosylase FPG [Mycobacterium
canettii CIPT 140010059]
gi|378772662|ref|YP_005172395.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str.
Mexico]
gi|383308668|ref|YP_005361479.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB327]
gi|385999709|ref|YP_005918008.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
CTRI-2]
gi|392387551|ref|YP_005309180.1| fpg [Mycobacterium tuberculosis UT205]
gi|397674843|ref|YP_006516378.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
H37Rv]
gi|422813982|ref|ZP_16862351.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CDC1551A]
gi|424805263|ref|ZP_18230694.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
W-148]
gi|433628044|ref|YP_007261673.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140060008]
gi|433635991|ref|YP_007269618.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070017]
gi|54037118|sp|P64151.3|FPG_MYCBO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|54040772|sp|P64150.3|FPG_MYCTU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166215634|sp|A1KMR9.1|FPG_MYCBP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166215638|sp|A5U6T0.1|FPG_MYCTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789445|sp|C1AG40.1|FPG_MYCBT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|13882775|gb|AAK47321.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
CDC1551]
gi|31619696|emb|CAD96636.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA
GLYCOSYLASE) [Mycobacterium bovis AF2122/97]
gi|121494454|emb|CAL72935.1| Probable formamidopyrimidine-dna glycosylase fpg [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124602074|gb|EAY61084.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
C]
gi|148506921|gb|ABQ74730.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium tuberculosis
H37Ra]
gi|148722641|gb|ABR07266.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
F11]
gi|224774413|dbj|BAH27219.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289417399|gb|EFD14639.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
T46]
gi|289421548|gb|EFD18749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CPHL_A]
gi|289540061|gb|EFD44639.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
K85]
gi|289544866|gb|EFD48514.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
T17]
gi|289687252|gb|EFD54740.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
02_1987]
gi|289692180|gb|EFD59609.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
T92]
gi|289695625|gb|EFD63054.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
EAS054]
gi|289710607|gb|EFD74623.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
GM 1503]
gi|289714611|gb|EFD78623.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
T85]
gi|298496188|gb|EFI31482.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium
tuberculosis 94_M4241A]
gi|308326063|gb|EFP14914.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu002]
gi|308329541|gb|EFP18392.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu003]
gi|308333734|gb|EFP22585.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu004]
gi|308337091|gb|EFP25942.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu005]
gi|308340903|gb|EFP29754.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu006]
gi|308344740|gb|EFP33591.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu007]
gi|308348720|gb|EFP37571.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu008]
gi|308353416|gb|EFP42267.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu009]
gi|308364863|gb|EFP53714.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu012]
gi|323718536|gb|EGB27707.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
CDC1551A]
gi|326904539|gb|EGE51472.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
W-148]
gi|339332287|emb|CCC27999.1| putative formamidopyrimidine-DNA glycosylase FPG (FAPY-DNA
glycosylase) [Mycobacterium africanum GM041182]
gi|340006105|emb|CCC45277.1| putative formamidopyrimidine-DNA glycosylase FPG (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140010059]
gi|341602844|emb|CCC65522.1| probable formamidopyrimidine-DNA glycosylase fpg [Mycobacterium
bovis BCG str. Moreau RDJ]
gi|344220756|gb|AEN01387.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
CTRI-2]
gi|356594983|gb|AET20212.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str.
Mexico]
gi|378546102|emb|CCE38381.1| fpg [Mycobacterium tuberculosis UT205]
gi|380722621|gb|AFE17730.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB327]
gi|395139748|gb|AFN50907.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
H37Rv]
gi|432155650|emb|CCK52901.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140060008]
gi|432167584|emb|CCK65104.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070017]
gi|440582403|emb|CCG12806.1| putative FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA
GLYCOSYLASE) [Mycobacterium tuberculosis 7199-99]
gi|444896466|emb|CCP45727.1| Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium tuberculosis H37Rv]
Length = 289
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|352517678|ref|YP_004886995.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic
site) lyase [Tetragenococcus halophilus NBRC 12172]
gi|348601785|dbj|BAK94831.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic
site) lyase [Tetragenococcus halophilus NBRC 12172]
Length = 282
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 123/242 (50%), Gaps = 23/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + K V +I K+I+ + F ++G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLVT-LVQDKTVAEVIVRWPKIIESPAVDTFCQKLIGQVINDIARRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + ++G +Y+ + K+T+ K++ + DG +L
Sbjct: 60 FLIFEFTD-------FDLISHLRMEG----KYEYTP-KNTEAPVDKHTHVIFKFTDGSQL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVP---PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
S+ D R+F ++ L+ + P I +LGP+ + E ++ F L IK LLL+
Sbjct: 108 SYHDVRKFGRMALV-EKGQYPFYKGIKQLGPEPVEEEFSLQAFEKKLQHSSSLIKPLLLN 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI-----KEVREALGVSLQF 232
Q ++G+GN ADEVL+ AKIHP Q A +L+K+ +L + I K VR A G +++
Sbjct: 167 QKVVAGLGNIYADEVLWLAKIHPQQPARTLTKKEAESLHQAIIAILAKAVR-AGGTTIRS 225
Query: 233 YK 234
YK
Sbjct: 226 YK 227
>gi|302522138|ref|ZP_07274480.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
gi|318056549|ref|ZP_07975272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. SA3_actG]
gi|318076723|ref|ZP_07984055.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. SA3_actF]
gi|302431033|gb|EFL02849.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
Length = 284
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V V+ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL LD GM+G + ++ A + V+ + DD
Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAERHLRVR-------------IGFDDAL 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L P I+ + D L +P+ D F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + L++ LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTAGLTRPRTDELLGHVRDVMNA 218
>gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
1435]
gi|297635544|ref|ZP_06953324.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
4207]
gi|297732543|ref|ZP_06961661.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
R506]
gi|313659875|ref|ZP_07816755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis KZN V2475]
gi|392431464|ref|YP_006472508.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
KZN 605]
gi|253319490|gb|ACT24093.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
KZN 1435]
gi|392052873|gb|AFM48431.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
KZN 605]
Length = 289
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|94987079|ref|YP_595012.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis
PHE/MN1-00]
gi|442555915|ref|YP_007365740.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis N343]
gi|94731328|emb|CAJ54691.1| Formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis
PHE/MN1-00]
gi|441493362|gb|AGC50056.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis N343]
Length = 279
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 31/231 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E G+ + + + + V +S ++ GK R+GK
Sbjct: 1 MPELPEVETIVRTLEPIINGRMCLNYTVYNQDSVQGDISLDVLIGAIFGKPF----RRGK 56
Query: 61 NLWLRL---DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
L + L DS +Y + + R V D P+ +++ LDDG
Sbjct: 57 LLLIPLVIKDS------------HVYTLCIHLKMTGRILVYPQDRCPTTHTRVSFSLDDG 104
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVD--EFTDSLSKKKITI 171
+ F D R+F VR+L+ T+ P+ + LGP EP+ +D F + ++ I
Sbjct: 105 NTIFFEDIRKFGYVRILS--TTEEPVWPFWNTLGP----EPLEIDVSTFIERFRGRRGNI 158
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K+LLL+Q I+G GN ADE L++A+I P+ T LS ES ATL ++EV
Sbjct: 159 KSLLLNQRVIAGCGNIYADESLFRAQISPMATVSQLSMESIATLYHALQEV 209
>gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
210]
Length = 328
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL L++ P+ GM+G + + V + R
Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVR---------------ISA 120
Query: 113 ELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKK 167
LDDG LSF D+R F L + D + VP P++ L D L D L +K
Sbjct: 121 LLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRK 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+K LLDQ +SGIGN ADE L++AK++ A +L +L +V REAL
Sbjct: 181 HSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREAL 240
>gi|336394014|ref|ZP_08575413.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 282
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + I K + ++ K+I+G SA F ++G +R+GK
Sbjct: 1 MPELPEVETVRQGLRG-LILNKTITNVEVRWGKIINGDSAQ-FANDLVGLTFQEINRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S + + + ++G +Y+ V + +K++ DG L
Sbjct: 59 YLLFRL------SDELTIVSHLRMEG----KYR---VTPQAQEVTKHTHVIFNFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T V + LGP+ TV +FT L K K IK LLDQ
Sbjct: 106 RYLDTRKFGRMTLIKTGTEDQVGGLKTLGPEPTATDFTVADFTRRLHKHKKAIKPTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQFYK 234
++G+GN ADEVL+ ++IHPLQ A +L+ L I E+ +A+ G +++ Y
Sbjct: 166 KVVAGLGNIYADEVLWLSQIHPLQPANTLTGTQIQALHDNIIAELAKAIKAKGTTIRSYT 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
+ + +H RE + C
Sbjct: 226 DAYGATGGFQLSLHAYGREGEPC 248
>gi|345861586|ref|ZP_08813842.1| formamidopyrimidine-DNA glycosylase [Desulfosporosinus sp. OT]
gi|344325286|gb|EGW36808.1| formamidopyrimidine-DNA glycosylase [Desulfosporosinus sp. OT]
Length = 273
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H KI + + + V+ G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLVKHVKDLKIKEITLIWPSAVV-GWEDKTFEGLVTGRRIQTIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD MTG + + + E P K++ L+ G EL
Sbjct: 60 YLLIMLDEDLTLIAHMRMTGRL------------NYFAEKKE-PEKHTHVVFRLEHG-EL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + P + + +LGP+ L+E T + KKK+ +KA LLDQ
Sbjct: 106 HFSDTRKFGRIQAIPTPLCICKSSLQKLGPEPLVEGFTPAVLKERFGKKKVFLKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
S ++G+GN DE L+ A + P + +LS E L I++V + A G S + Y+
Sbjct: 166 SVLAGMGNIYVDESLFLAGLSPERRVDTLSDEEIVKLHHAIQKVLQAGIDARGTSFRDYR 225
>gi|429106796|ref|ZP_19168665.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 681]
gi|426293519|emb|CCJ94778.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 681]
Length = 269
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|389879418|ref|YP_006372983.1| formamidopyrimidine-DNA glycosylase [Tistrella mobilis
KA081020-065]
gi|388530202|gb|AFK55399.1| formamidopyrimidine-DNA glycosylase [Tistrella mobilis
KA081020-065]
Length = 287
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R I IG+++ V++ D + + + F + G+A+++A R+
Sbjct: 1 MPELPEVETVLRGIAPRMIGRRLAEVEARRPDLRRPL----PAGFVQRLTGRAVIAADRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG----VAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K L L L+ GM+G + I+ VA AV D + ++ L
Sbjct: 57 AKYLRLHLEGGETLIVHLGMSGRLVIEDAPPPVAFHHGPSIAVAD-----APHTHVVFRL 111
Query: 115 DDGLELSFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
DDG + F D RRF + +D + + LGP+ L + + ++ +K
Sbjct: 112 DDGTRILFADPRRFGLMDIAATDDLDAHDLFAHLGPEPLGNGFSGPYLARAFEGRRAPVK 171
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
ALLLDQ + G+GN A E L++A IHP + A +LS E C L ++
Sbjct: 172 ALLLDQRVVVGVGNIYASESLFEAGIHPARAAGTLSAEDCDRLAAAVR 219
>gi|452953034|gb|EME58457.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Amycolatopsis decaplanina DSM 44594]
Length = 286
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + + + + A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEAHVSGRTITEVEVLHARAIRRHELGAEDFSGRLSGVKITAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + ++ K V+ F D+G E
Sbjct: 61 KYLWLELSDGQAMLAHLGMSGQMLVQPDDAPDEKHLRVR------------FRFADNGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T++P I+ + D + +D+ +L ++ IK
Sbjct: 109 LRFVDQRTFGGLALAELTEVDGTALPGTIAHIARDPMDPRFDLDQAVRALRSRRTEIKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV
Sbjct: 169 LLDQTLVSGIGNIYADEALWRSKLHWARPTDRLTAAHGRTVLTAASEV 216
>gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans
CB1190]
gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans
CB1190]
Length = 298
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 34/241 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H G++I +A + A+DF + G+ + + R+G
Sbjct: 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60
Query: 60 KNLWLRL----DSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL L P P GM+G + V D + K+ +
Sbjct: 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQML-------------VADHGKPDEKHLRV 107
Query: 111 FVELDD-GLELSFTDKRRFAKVRLLNDPTS-------VP-PISELGPDALLEPMTVDEFT 161
V DD G EL F D+R F L P + +P P++ + D + +D+
Sbjct: 108 RVTFDDDGPELRFVDQRTFGG--LSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAV 165
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+ +++ +K LLDQ+ +SGIGN ADE L++A++H + SL++ +L E
Sbjct: 166 AGIRRRRTGLKRALLDQTVVSGIGNIYADEALWRARLHWARPTESLTRAQGRAVLTAAAE 225
Query: 222 V 222
V
Sbjct: 226 V 226
>gi|373857546|ref|ZP_09600287.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 1NLA3E]
gi|372452678|gb|EHP26148.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 1NLA3E]
Length = 275
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E + K+I + V F+ ++ G+ I R+GK
Sbjct: 1 MPELPEVETVKRTLEALVLQKEINSVSVFWPKIVKRPDEVVQFQDALKGQKIQKMGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + + + ++G + V T+ K++ DG EL
Sbjct: 61 FLI-------FYTEDYALVSHLRMEG-------KYGVFSTEAPVEKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + T PP+S LGP+ E TV T+ L++ IK LLDQ
Sbjct: 107 RYKDIRKFGTMHLFSKGTEFEQPPLSLLGPEPFSEKFTVQYLTEILARTNRKIKVTLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ + G+GN DE L+++KIHP + A SLS E L + I
Sbjct: 167 ATVVGLGNIYVDETLFRSKIHPERQAASLSSEEITALHQEI 207
>gi|423100646|ref|ZP_17088353.1| DNA-formamidopyrimidine glycosylase [Listeria innocua ATCC 33091]
gi|370792870|gb|EHN60713.1| DNA-formamidopyrimidine glycosylase [Listeria innocua ATCC 33091]
Length = 273
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D ++ +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENDEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+HP + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTY 224
>gi|392948607|ref|ZP_10314214.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus KCA1]
gi|392436169|gb|EIW14086.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus KCA1]
Length = 274
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 36/268 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDN----KVIDGVSASDFEASVLGKAILSA 55
MPELPEVE RR + ++VK + IAD + K+I+ + F+ ++ + I +
Sbjct: 1 MPELPEVETVRRGL------NRLVKGATIADIDVYWPKIINN-DVALFKERLINQTIQTI 53
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L R F G+T +++ + V E K++ L
Sbjct: 54 DRRGKYLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEARDKHTHVVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
D +L + D R+F ++ L+ + SV + +GP+ + + +T+ T + K IK
Sbjct: 101 DDRDLLYNDTRKFGRMTLVPTGEELSVAGLRTIGPEPVADQLTLAYLTATFEHSKKMIKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVS 229
LLLDQS I+GIGN ADE L+ +KIHP++ A SL+ + ATL I E+ A+ G +
Sbjct: 161 LLLDQSKIAGIGNIYADETLWMSKIHPMRPANSLTADEIATLRDNIITEMALAIKGHGTT 220
Query: 230 LQFYKCYFA-----KPYVHKKHRENKIC 252
+ + F + ++H RE + C
Sbjct: 221 VHSFSTAFGEAGQFQNHLHVYGREGQPC 248
>gi|251795551|ref|YP_003010282.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2]
gi|247543177|gb|ACT00196.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2]
Length = 287
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK+I + + FE ++ G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLIELVAGKRIASVEVKLPRIIQRPAEPEAFEMALAGRTIQTVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + +D + + ++G R V +DE ++ DDG +L
Sbjct: 61 FLRVVMDG-------LVLVSHLRMEG-------RYGVFPSDEPVELHTHVLFHFDDGTDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALL-EPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + L T + P+S+LG + L E T D L KK IK LLL+
Sbjct: 107 RYKDVRQFGTMHLFEPGTEFEMKPLSKLGLEPLENEAFTADALKGLLGKKTGLIKPLLLN 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
Q Y+ G+GN DE L+ A IHP +TA SL K L + I
Sbjct: 167 QEYVVGLGNIYVDEALFLAGIHPERTADSLKKAEWIRLHEAI 208
>gi|385262563|ref|ZP_10040667.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK643]
gi|385190464|gb|EIF37911.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK643]
Length = 274
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKI SI K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLENLILGKKI-SSIDIRYPKMIK-TDLDEFHKEVSGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLIFYLTDKVLIS-HLRMEGKFFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + E + F +LSK K IK
Sbjct: 104 LVYEDVRKFGTMELL-----APQLLEAYFVSKKLGPEPMEEDFDLQTFQAALSKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGV 228
+ LLDQ+ ++G+GN DEVL++A++HP +T+ SL+ + L + + + E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAQVHPARTSQSLTAKEVTALHDQTIAVLGQAVEKGGS 218
Query: 229 SLQFYKCYFAK 239
+++ Y F +
Sbjct: 219 TIRTYTNAFGE 229
>gi|325978855|ref|YP_004288571.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|386338290|ref|YP_006034459.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|325178783|emb|CBZ48827.1| fpg [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280926|dbj|BAK28500.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 273
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 1 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVSFETEILGQTFQNIGRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L L+ S M G + V +K+ +LDDG
Sbjct: 57 GKYLLLMLNKQVIIS-HLRMEGKYLLFPEQVPD-------------NKHFHVLFQLDDGS 102
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + LL N + +LGP+ E + EFT L K IK LL
Sbjct: 103 TLVYQDIRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLL 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
DQ+ + G+GN DE L+ AKIHP + ++SL+ A L
Sbjct: 163 DQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALL 201
>gi|41407426|ref|NP_960262.1| hypothetical protein MAP1328c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417750615|ref|ZP_12398970.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776928|ref|ZP_20955757.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395778|gb|AAS03645.1| hypothetical protein MAP_1328c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336457778|gb|EGO36772.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436722916|gb|ELP46802.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 262
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + ++ + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRHQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPDAL + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDAL--GLGLRDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQS ++G+GN + DE+ ++A+I P + L + L + + +V
Sbjct: 163 DQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQV 208
>gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes
DSM 40736]
gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes
DSM 40736]
Length = 286
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ + + ++ + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + ++ DE K+ + V D L
Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPHTAP----------DE---KHLRIRVRFTDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
EL F D+R F + L N P +P I+ + D L E + F +L +K+ TIK
Sbjct: 108 DTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ +LL +++V A
Sbjct: 168 LLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTLSLLGHVRDVMNA 218
>gi|424801640|ref|ZP_18227182.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 696]
gi|423237361|emb|CCK09052.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 696]
Length = 267
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRV 246
>gi|288905821|ref|YP_003431043.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
UCN34]
gi|288732547|emb|CBI14119.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus
gallolyticus UCN34]
Length = 273
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 1 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVSFETEILGQTFQNIGRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L L+ S M G + V +K+ +LDDG
Sbjct: 57 GKYLLLMLNKQVIIS-HLRMEGKYLLFPEQVPD-------------NKHFHVLFQLDDGS 102
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + LL N + LGP+ E + EFT L K IK LL
Sbjct: 103 TLVYQDIRKFGTMELLYPNQIEAYFQKKNLGPEPTKETFDLSEFTRKLKASKKIIKPYLL 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
DQ+ + G+GN DE L+ AKIHP + ++SL+ A L
Sbjct: 163 DQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALL 201
>gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu001]
gi|306973332|ref|ZP_07485993.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu010]
gi|307081038|ref|ZP_07490208.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu011]
gi|308214424|gb|EFO73823.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu001]
gi|308357235|gb|EFP46086.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu010]
gi|308361244|gb|EFP50095.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis
SUMu011]
Length = 289
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHMTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F L + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ A +L +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|345513657|ref|ZP_08793173.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4]
gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4]
Length = 276
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE +R IE +G KI S+I + ++VI FE G+ I R+GK
Sbjct: 1 MPEMPEVETIKRIIEPQIVGVKI-DSVITNHSQVIAYPDMYRFEQETNGQTINKMSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L + DS MTG + + +P ++ + L +G +
Sbjct: 60 YLTIHFDSGDRLILHLRMTGQLLVT--------------PHNYPMENHTHLIMNLSNGTQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D RR + L ND + +LG + L +T LSK+K IK +L D
Sbjct: 106 LRYIDVRRLGRFWLFGKNDIDDKSGLEKLGMEPLDNNLTAPYLVAHLSKRKRPIKEMLHD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q+ I+GIGN +DE+L+ A I+P + LS + +L+ I+E+
Sbjct: 166 QTVIAGIGNIYSDEILHAAGIYPGKYCSDLSDKEWNSLVVKIREI 210
>gi|300741696|ref|ZP_07071717.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567]
gi|300380881|gb|EFJ77443.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567]
Length = 331
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 117/267 (43%), Gaps = 59/267 (22%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G I + I D+ + + S DF + G I A+R+G
Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVHILDERSIRRHIGGSADFTMRLEGTRIRGAYRRG 60
Query: 60 KNLWLRL---DSPPFPS--------------FQFGMTGAIYIKGVAVTQYKRSAVKDTDE 102
K +WL L D P P GM+G + +K T E
Sbjct: 61 KYMWLTLSASDDEPSPKPGDSDDTLLPYALVIHLGMSGQLLVK--------------TPE 106
Query: 103 WPS-KYSKFFVELDDG-------LELSFTDKRRFAKVRLLNDPTSVPPISELG-----PD 149
+P+ K+ K +EL+ +EL F D+R F + L +P + L P+
Sbjct: 107 FPAEKHLKIVLELEPANDDIGKTIELRFVDQRIFGGMFLSEVVPGIPAGASLAGAEEIPE 166
Query: 150 ALLEPMTV--------DEFTDSLSKKKIT------IKALLLDQSYISGIGNWVADEVLYQ 195
LL P V D + D ++I IK LLLDQS +SGIGN ADE L++
Sbjct: 167 ELLVPEAVEHIGRDPVDPYFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWR 226
Query: 196 AKIHPLQTAVSLSKESCATLLKCIKEV 222
A+IH + A SLS L + +V
Sbjct: 227 ARIHYAKPAKSLSAAQTRELFAAVHQV 253
>gi|256397116|ref|YP_003118680.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM
44928]
gi|256363342|gb|ACU76839.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM
44928]
Length = 290
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 123/280 (43%), Gaps = 46/280 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E +G+ + + + + DG DF A G +LSA R
Sbjct: 1 MPELPEVEVVRRGLERWAVGRTVAAAEVLHPRAIRRHPDG--PEDFAARAAGLTLLSAER 58
Query: 58 KGKNLWLRLDSPPFP-----SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
+GK LWL L + GM+G + ++ K ++ F
Sbjct: 59 RGKFLWLPLGEGETSVGEAVTGHLGMSGQLLLQPSGTPDEKHLRIR------------FT 106
Query: 113 ELDDGLELSFTDKRRFAKV---RLLND------PTSVPPISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F + +L +D P SV I+ D L VD F
Sbjct: 107 FADDGPELRFVDQRTFGGMALEKLEHDRQGVVVPASVVHIAR---DVLDPEFDVDFFHSE 163
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
L ++ +K LLDQ+ +SGIGN ADE L+ A++H + + + +L+ +EV
Sbjct: 164 LRRRNTGLKRALLDQTRVSGIGNIYADEALWIARLHYDRPTSKMRRPDTDRVLEAAREVM 223
Query: 224 EA-----------LGVSLQFYKCYFAKPYVHKKHRENKIC 252
A L V++ YFA+ +H RE + C
Sbjct: 224 TAALAVGGTSFDSLYVNVNGESGYFAR-SLHAYGREGEPC 262
>gi|156936197|ref|YP_001440113.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ATCC
BAA-894]
gi|389839070|ref|YP_006341154.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ES15]
gi|417792804|ref|ZP_12440119.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii E899]
gi|429117382|ref|ZP_19178300.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 701]
gi|429120495|ref|ZP_19181170.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 680]
gi|449310290|ref|YP_007442646.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii SP291]
gi|166215624|sp|A7MQ97.1|FPG_ENTS8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|156534451|gb|ABU79277.1| hypothetical protein ESA_04096 [Cronobacter sakazakii ATCC BAA-894]
gi|333953087|gb|EGL71074.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii E899]
gi|387849546|gb|AFJ97643.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ES15]
gi|426320511|emb|CCK04413.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 701]
gi|426325009|emb|CCK11907.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 680]
gi|449100323|gb|AGE88357.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii SP291]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRW---PVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRV 246
>gi|401678167|ref|ZP_10810135.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. SST3]
gi|400214535|gb|EJO45453.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. SST3]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ + T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRVL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS + C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAV 205
>gi|365840768|ref|ZP_09381945.1| DNA-formamidopyrimidine glycosylase [Anaeroglobus geminatus F0357]
gi|364560511|gb|EHM38445.1| DNA-formamidopyrimidine glycosylase [Anaeroglobus geminatus F0357]
Length = 273
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MP+ EVE RR + G+ I +++ ++I S +DF A++ G+ + + RKGK
Sbjct: 1 MPKFTEVETVRRTLAAVLPGRTI-ETVHVALPRLIKNASPADFAAALRGQTVTAVQRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L L D P MTG+ +Y A + P K + LD G
Sbjct: 60 YLRLVFDGPRHLLIHLRMTGSLVYFPAAA-------------DLP-KSAHIIFRLDKG-N 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R F + L+ PT V LGPDA TVD L K + T+KA LLD
Sbjct: 105 LVYCDVRTFGCLWLIPPAGPTGVKGYDTLGPDANGPDFTVDYIWSLLKKSERTVKAFLLD 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q+ I+G+GN ADE L+ A I P + S++K+S L + I+ V
Sbjct: 165 QTVIAGLGNIYADEALFLAGIRPSRRCGSMTKKSLVALHEAIQSV 209
>gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
11563]
gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
11563]
Length = 285
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 30/249 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+PEVE RR +EE IGK IV S+ ++I GV A FE + G+ + R
Sbjct: 2 MPEMPEVETVRRGLEEIVIGK-IVSSVTVTWPRIIQAEGGVEA--FETRMPGQQLEKVGR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDD 116
GK L F T +I A + + + ++ E P +Y+ L D
Sbjct: 59 VGKFLL------------FYWTEVTWI---AHLRMEGKYLYESTESPVDQYTHVICHLTD 103
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISEL--GPDALLEPMTVDEFTDSLSKKKITIKAL 174
G +L + D R+F ++ ++ + I++L GP+ +T D K +IKA+
Sbjct: 104 GHDLRYRDVRKFGRIHMVEKADTEAEIAKLKLGPEP--NDLTFDYLQKRFDKTTRSIKAV 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSL 230
LLDQ I+GIGN ADE+L+ AKIHP Q+A SL E ++ + + E G ++
Sbjct: 162 LLDQGVIAGIGNIYADEILFAAKIHPEQSARSLYDEEIQAIITESRRIMASAIEVGGTTI 221
Query: 231 QFYKCYFAK 239
+ Y F +
Sbjct: 222 RTYTNTFGE 230
>gi|383782233|ref|YP_005466800.1| putative formamidopyrimidine-DNA glycosylase [Actinoplanes
missouriensis 431]
gi|381375466|dbj|BAL92284.1| putative formamidopyrimidine-DNA glycosylase [Actinoplanes
missouriensis 431]
Length = 281
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE R+ + + G+ I + + + + + F A + G+ IL R+G
Sbjct: 1 MPELPEVETVRQGLSKWVAGRTIAAAEVHHPRAIRRHLPGDAHFSAVLAGRTILDISRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ K V+ F D G +
Sbjct: 61 KYLWLPLDSGDAVIAHLGMSGQLLMQPAEAPDEKHLRVR------------FTFTDGGPQ 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKALLLD 177
L F D+R F + + +P IS + D + +P+ DE F L + IK LLD
Sbjct: 109 LRFVDQRTFGGLSVSEGGAELPGEISHIARDPM-DPLFDDEAFVARLRGRHTEIKRALLD 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q+ ISG+GN ADE L++AK+H + +++ + LL +++V
Sbjct: 168 QTLISGVGNIYADEALWRAKLHGARPTDQITRPAAKRLLAHVRDV 212
>gi|305680813|ref|ZP_07403620.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii
ATCC 14266]
gi|305659018|gb|EFM48518.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii
ATCC 14266]
Length = 312
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ I + + + +F + +LG+ I+ R+G
Sbjct: 1 MPELPEVETIRRGLAEHVCGRTITDVAVHHPRAIRHVLGGEGEFRSEILGRTIIGLGRRG 60
Query: 60 KNLWLRLDSP--------------PFPS-----------FQFGMTGAIYIKGVAVTQYKR 94
K LWL L P P P GM+G + IK
Sbjct: 61 KFLWLNLADPAAATASASSVPTSQPTPQATPQAGDQVVVVHLGMSGQMLIK--------- 111
Query: 95 SAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFA---KVRLLNDPTS-VPPISELGPDA 150
+ ++D+ K+ + V DD +L F D+R F +L++ VP ++
Sbjct: 112 DSNANSDDPKFKHCRIQVRFDDDTQLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARD 171
Query: 151 LLEP-MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LL+P + + E ++ K + +K LLL+Q I+GIGN ADE+L+ A I+P Q A +L
Sbjct: 172 LLDPELKLSEVAATMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDP 231
Query: 210 ESCATLLKCIKEVREA 225
+ LL + V A
Sbjct: 232 AALKNLLMAGRTVMRA 247
>gi|428306815|ref|YP_007143640.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Crinalium epipsammum PCC 9333]
gi|428248350|gb|AFZ14130.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Crinalium epipsammum PCC 9333]
Length = 283
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 39/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + KKI+ + + +SA DF A + G AI HR+GK
Sbjct: 1 MPELPEVETVRQGLNHVTLAKKILGGDVLLTRTIAHPLSAEDFLAGLKGTAITEWHRRGK 60
Query: 61 NLWLRL------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L + S + MTG + D ++ K+++ +
Sbjct: 61 YLLASVIDAHSASSAGWLGVHLRMTGQLLWV-------------DQEQPLEKHTRVRLFF 107
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPP------ISELGPDALLEPMTVDEFTDSLSKKK 168
G EL F D+R F ++ + T PP + +LG D + +V+ T L ++K
Sbjct: 108 QGGHELRFVDQRTFGQMWWVQPGT--PPEEVITGLQKLGLDPFSDDFSVEYLTKQLHQRK 165
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE---- 224
+IK +LLDQ+ ++G+GN ADE L+ + I P A SL+ E L I +V E
Sbjct: 166 RSIKTVLLDQATVAGLGNIYADEALFLSGIKPTTVASSLTVEQIERLRTAIIQVLENSIA 225
Query: 225 ALGVSLQFY-------KCYFAKPYVHKKHREN-KICRLFKVRLKLMLTAAAF 268
A G + + Y +V+ + + ++C +RLKL+ +A F
Sbjct: 226 AGGTTFSNFLNVQGVNGNYGGIAWVYNRTSQPCRVCNTPILRLKLVGRSAHF 277
>gi|392531516|ref|ZP_10278653.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
ATCC 35586]
Length = 284
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + G I + D + S+ F +LG+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTNLVEGATIQDVDVYWDRIITAPFSSEAFRNDLLGQTIHKIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +D + M + ++G + V+ T K++ L DG +L
Sbjct: 61 YLIFLMDD-------WAMISHLRMEG-------KYEVEKTGTPLKKHTHVVFHLTDGRDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T P I LGP+ + E ++ F+ +L K IK LLL+Q
Sbjct: 107 RYLDVRKFGRMTLVPIGTEHEAPGIKGLGPEPIPELFKLEPFSVALGSKLRAIKPLLLEQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLS----KESCATLLKCIKEVREALGVSLQFYK 234
+ G+GN DE L++AKIHPL+ A SL+ K +++ + EA G +++ Y+
Sbjct: 167 KIVVGLGNIYVDEALFEAKIHPLRPANSLTSIEIKNLHHSIIGVLGRAVEAGGTTIRTYQ 226
>gi|365102456|ref|ZP_09332757.1| formamidopyrimidine-DNA glycosylase [Citrobacter freundii
4_7_47CFAA]
gi|363646184|gb|EHL85432.1| formamidopyrimidine-DNA glycosylase [Citrobacter freundii
4_7_47CFAA]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 28/263 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICR 253
KP + RE + CR
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR 245
>gi|333395892|ref|ZP_08477709.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
Length = 282
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + I K + ++ K+I+G SA F ++G R+GK
Sbjct: 1 MPELPEVETVRQGLRG-LILNKTIANVEVRWGKIINGDSAQ-FANDLVGLTFQEIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S + + + ++G +Y+ V + +K++ DG L
Sbjct: 59 YLLFRL------SDELTIVSHLRMEG----KYR---VTPQAQEVTKHTHVIFNFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T V + LGP+ TV +FT L K K IK LLDQ
Sbjct: 106 RYLDTRKFGRMTLIKTGTEDQVGGLKTLGPEPTATDFTVADFTQRLRKHKKAIKPTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQFYK 234
++G+GN ADEVL+ ++IHPLQ A +L+ L I E+ +A+ G +++ Y
Sbjct: 166 KVVAGLGNIYADEVLWLSQIHPLQPANTLTSAQIQALHDNIIAELAKAIKAKGTTIRSYT 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
+ + +H RE + C
Sbjct: 226 DAYGATGGFQLSLHAYGREGEPC 248
>gi|422506916|ref|ZP_16583134.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA2]
gi|313819676|gb|EFS57390.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA2]
Length = 256
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN--KVIDGVS-ASDFEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + G++ A+ FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPRGGLAGAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|119717504|ref|YP_924469.1| formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614]
gi|166215641|sp|A1SLU7.1|FPG_NOCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|119538165|gb|ABL82782.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardioides sp. JS614]
Length = 295
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 121/265 (45%), Gaps = 24/265 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H +G I + + V D + F A++ G+ I +A R+G
Sbjct: 1 MPELPEVEVVRAGLERHVLGATIARVDVLHPRPVRRDLRGPAGFAAALTGRRIEAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD+ GM+G + ++ DE + D+G E
Sbjct: 61 KYLWLPLDNGDALLGHLGMSGQLLVQ----------PPDAPDERHLRVRLALEGADEGRE 110
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +PP I+ + D L D+F + ++ +K LLDQ
Sbjct: 111 LRFVDQRMFGGLSVSAGGADLPPEIAHIARDPLDPEFDDDDFVRRVRRRTSGVKRQLLDQ 170
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EALG 227
+ ISG+GN ADE L++A+IH + L+ LL +EV +AL
Sbjct: 171 NLISGVGNIYADEALWRARIHGERPGDRLTATRVRELLAHAREVMLAALGEGGTSFDALY 230
Query: 228 VSLQFYKCYFAKPYVHKKHRENKIC 252
V++ YF + +H RE + C
Sbjct: 231 VNVNGESGYFDR-SLHAYGREGEAC 254
>gi|377573012|ref|ZP_09802088.1| formamidopyrimidine-DNA glycosylase [Mobilicoccus pelagius NBRC
104925]
gi|377538286|dbj|GAB47253.1| formamidopyrimidine-DNA glycosylase [Mobilicoccus pelagius NBRC
104925]
Length = 299
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR I +H +G+ + V D A + G+ +L+A R+G
Sbjct: 1 MPELPEVEVVRRGIADHVVGRTFSHVALHGSRVARRHVPGPDDLAARLAGRTVLAADRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + ++ + P +++ F + D G +
Sbjct: 61 KYLWLALDGAEALVVHLGMSGQMLVED-----------PSAERRPHQHATFTFD-DAGTQ 108
Query: 120 LSFTDKRRF---AKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT------ 170
L F D+R F A V L+ DP + + P+++ + VD D + +
Sbjct: 109 LRFVDQRTFGGLALVDLVPDPRGGGYVHGI-PESVTH-IAVDPLEDVFDARAVARLMRAS 166
Query: 171 ---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+K LLL Q +SGIGN ADE L++A++H + A +++ + LL +++V A
Sbjct: 167 RSGVKRLLLHQGVVSGIGNIYADESLWRARLHGERPAAAVTGPAIERLLAHVQDVMRA 224
>gi|414083233|ref|YP_006991941.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
LMA28]
gi|412996817|emb|CCO10626.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
LMA28]
Length = 284
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + G I + D + S+ F +LG+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTNLVEGATIQDVDVYWDRIITAPFSSEAFRNDLLGQTIHKIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +D + M + ++G + V+ T K++ L DG +L
Sbjct: 61 YLIFLMDD-------WAMISHLRMEG-------KYEVEKTGTPLKKHTHVVFHLTDGRDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T P I LGP+ + E ++ F+ ++ K IK LLL+Q
Sbjct: 107 RYLDVRKFGRMTLVPIGTEHEAPGIKGLGPEPIPELFKLEPFSVAIGSKSRAIKPLLLEQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLS----KESCATLLKCIKEVREALGVSLQFYK 234
+ G+GN DE L++AKIHPL+ A SL+ K +++ + EA G +++ Y+
Sbjct: 167 KIVVGLGNIYVDEALFEAKIHPLRPANSLTSIEIKNLHHSIIGVLGRAVEAGGTTIRTYQ 226
>gi|283787732|ref|YP_003367597.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168]
gi|282951186|emb|CBG90879.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G KI+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGAKILHAHVRN-GRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS+ C L++ IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSQADCELLVRVIKAV 205
>gi|455645454|gb|EMF24514.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii GTC 09479]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICR 253
KP + RE + CR
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR 245
>gi|433632020|ref|YP_007265648.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070010]
gi|432163613|emb|CCK61033.1| Putative formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA
glycosylase) [Mycobacterium canettii CIPT 140070010]
Length = 289
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFF 111
K LWL L++ P+ GM+G + + V + R SA+
Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSK 166
LDDG LSF D+R F + D + VP P++ L D L D L +
Sbjct: 107 --LDDGTVLSFADQRTFGGWLFADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REA 225
K +K LLDQ +SGIGN ADE L++AK++ + A +L+ +L +V REA
Sbjct: 165 KHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGARVAATLTCRRLGAVLHAAADVMREA 224
Query: 226 L 226
L
Sbjct: 225 L 225
>gi|67906503|gb|AAY82610.1| predicted formamidopyrimidine-DNA glycosylase [uncultured bacterium
MedeBAC35C06]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 26/262 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A++ + KKIV I +N+ + DFE ++ K I+S R+ K
Sbjct: 1 MPELPEVETTMSALQPF-VEKKIVSVDI--NNRNLRWKIEKDFEKNISNKKIISIARRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L S F GM+G I I+ + YK K+ + L D ++
Sbjct: 58 YIIFNL-SDGFIILHLGMSGNIRIQDLKSNTYK------------KHDHIILYLKDK-KI 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D RRF + ++ I LGP+ LL + K K IK +++Q
Sbjct: 104 IYNDIRRFGSIHFTDNAKDHFLIKNLGPEPLLSDFNKKYLFNISRKSKTNIKNFIMNQKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQ-FYKC 235
+ G+GN A E L++A+I+P S+S+E C L+K IK + + G +L+ FY
Sbjct: 164 VVGVGNIYASEALFEARINPNMITNSISEEDCKRLVKSIKNILKIAINMGGTTLKDFYSV 223
Query: 236 YFAKPYVHKK----HRENKICR 253
++ Y K RENK C+
Sbjct: 224 DGSEGYFKIKLKVYGRENKKCK 245
>gi|365861189|ref|ZP_09400966.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. W007]
gi|364009340|gb|EHM30303.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. W007]
Length = 286
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRSVRRHLAGGVDFAARLRGVRFGVAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LW+ +D GM+G + ++ + DE K+ + + DD
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVQ----------PAEAPDE---KHLRIRMRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ D F +L +++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDTIAHIARDPL-DPLFDDAAFHTALRQRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRAKLHYDRPTETLTRPKSAELLGHARDVMNA 218
>gi|345002306|ref|YP_004805160.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SirexAA-E]
gi|344317932|gb|AEN12620.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SirexAA-E]
Length = 285
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 16/231 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVEDVDVLHPRAVRRHIAGGPDFAARLRGLRFGTAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ LD GM+G + ++ K ++ +F +L G
Sbjct: 61 KYLWIPLDEVSASLLGHLGMSGQLLVQPSEAPDEKHLRIR---------VRFADDL--GT 109
Query: 119 ELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL F D+R F + L N P +P I+ + D L F +L ++ T+K LL
Sbjct: 110 ELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHTALRLRRTTVKRALL 169
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
DQS ISG+GN ADE L+++++H + +L++ A LL +++V REAL
Sbjct: 170 DQSLISGVGNIYADEALWRSRLHYERPTATLTRPRTAELLGHVRDVMREAL 220
>gi|269929067|ref|YP_003321388.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
gi|269788424|gb|ACZ40566.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
Length = 286
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARR I E +G+ +V + V+ + +++G + R GK
Sbjct: 1 MPELPEVEAARRGIAEQLLGRVLVGYELTRPALVVPAPGLT--LDALVGSRLECVERHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRS-AVKDTD-EWPSKYSKFFVELDDGL 118
L+L + P + G + +G + + V D P K + + D
Sbjct: 59 YLFLSFE-PAVLVIHLKLAGQLVARGSGIPGFAAGHPVPAYDAPLPHKSTHLRFDFDGDA 117
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISE---LGPDALLEPMTVDEFTDSLSKKKIT-IKAL 174
L TD R FA+V LL +P E LGPD L TV+ L+++ + +K
Sbjct: 118 HLYLTDIRHFARVWLLPH-DDLPAFREGLHLGPDVLDPAFTVETLRQGLARRTVGRLKPT 176
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
LLDQS ++G+GN DE L+QAK+HP +TA SL+ L + I E
Sbjct: 177 LLDQSLVAGLGNIYVDESLWQAKLHPERTAASLTDAEIERLYEGIHTTME 226
>gi|395243791|ref|ZP_10420770.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus hominis CRBIP
24.179]
gi|394483841|emb|CCI81778.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus hominis CRBIP
24.179]
Length = 276
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 100/233 (42%), Gaps = 31/233 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS-------IIADDNKVIDGVSASDFEASVLGKAIL 53
MPE+PEVE RR +E GK I K I+ D KV D + K IL
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKTIKKVTVWYPKIIMGDSQKVADRLQ---------NKTIL 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R GK L +RL M G R KDT + ++ +F
Sbjct: 52 GIDRYGKYLLIRLSDDLTLVSHLRMEGKY-----------RLVAKDTPKQKHEHVQFL-- 98
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
DDG L + D R+F ++ L+ T I LGP+ T + L+KKK I
Sbjct: 99 FDDGTALRYDDVRKFGRMHLVETGTERQTTGIRHLGPEPNSSEFTFNYLKGQLAKKKKNI 158
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
K +LDQS + G+GN DEVL+Q+KIHPL T + + L I E
Sbjct: 159 KTSILDQSIVCGLGNIYVDEVLWQSKIHPLSTPAKIPVKQVKVLYDSINATIE 211
>gi|377556243|ref|ZP_09785958.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus gastricus PS3]
gi|376168666|gb|EHS87414.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus gastricus PS3]
Length = 279
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G++I + + + V +F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLMRIAAGRQINGIDVLYGKTITNDVE--EFRQALIGQTITDIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + Q M + ++G Q V K++ D +L
Sbjct: 59 YLLFRFTN------QLTMVSHLRMEGSYFNQPTGGEV-------DKHTHVIFHFTDQTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + V + +GP+ +D F D L + IK LL+Q
Sbjct: 106 CYRDTRKFGRMTLVKTGNEYEVGGLKTIGPEPTEHDFKLDYFIDILKHSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSLQFYK 234
S+++G+GN DEVL+ AKI+P Q A SLS + L K I E++ A G ++ +K
Sbjct: 166 SHVAGLGNIYCDEVLWMAKINPEQPANSLSDTQASILRKSIISEIKRATKLHGTTVHTFK 225
Query: 235 CYFAK 239
F
Sbjct: 226 NAFGN 230
>gi|420146248|ref|ZP_14653678.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402064|gb|EJN55457.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 282
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 26/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + K I ++ K+I+G SA F ++G R+GK
Sbjct: 1 MPELPEVETVRQGLRGLILNKTIA-NVEVRWGKIINGDSAQ-FANDLVGLTFQEIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S + + + ++G +Y+ V + +K++ DG L
Sbjct: 59 YLLFRL------SDELTIVSHLRMEG----KYR---VTPQAQEVTKHTHVIFNFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T V + LGP+ TV +FT L K K IK LLDQ
Sbjct: 106 RYLDTRKFGRMTLIKTGTEDQVGGLKTLGPEPTATDFTVADFTQRLRKHKKAIKPTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL-KCIKEVREAL---GVSLQFYK 234
++G+GN ADEVL+ ++IHPLQ A +L+ L I E+ +A+ G +++ Y
Sbjct: 166 KVVAGLGNIYADEVLWLSQIHPLQPANTLTGAQIQALHDNIIAELAKAIKAKGTTIRSYT 225
Query: 235 CYFA-----KPYVHKKHRENKIC 252
+ + +H RE + C
Sbjct: 226 DAYGATGGFQLSLHAYGREGEPC 248
>gi|306834024|ref|ZP_07467145.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC
700338]
gi|336064758|ref|YP_004559617.1| formamidopyrimidine-DNA glycosylase [Streptococcus pasteurianus
ATCC 43144]
gi|304423812|gb|EFM26957.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC
700338]
gi|334282958|dbj|BAK30531.1| formamidopyrimidine-DNA glycosylase [Streptococcus pasteurianus
ATCC 43144]
Length = 296
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 24 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVAFETGILGQTFQNIGRR 79
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L L+ S M G + V +K+ +LDDG
Sbjct: 80 GKYLLLMLNKQVIIS-HLRMEGKYLLFPEQVPD-------------NKHFHVLFQLDDGS 125
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + LL N + +LGP+ E + EFT L K IK LL
Sbjct: 126 TLVYQDVRKFGTMELLYLNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLL 185
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
DQ+ + G+GN DE L+ AKIHP + + SL+ A L
Sbjct: 186 DQTLVVGLGNIYVDEALWAAKIHPERVSSSLTDSEIALL 224
>gi|451343315|ref|ZP_21912388.1| formamidopyrimidine-DNA glycosylase [Eggerthia catenaformis OT 569
= DSM 20559]
gi|449337895|gb|EMD17050.1| formamidopyrimidine-DNA glycosylase [Eggerthia catenaformis OT 569
= DSM 20559]
Length = 270
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS------IIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE R+ ++ + KKI+ + II D+ ++ F+ +V K IL
Sbjct: 1 MPELPEVETVRQTLKHFVLNKKIISADLRYPKIIEDEPEI--------FKQAVSNKKILD 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L L+ M G IK TD + K+
Sbjct: 53 IDRMGKYLIFLLEEQTVFIAHLRMEGKFNIKS-------------TDTFYQKHDHIIFHF 99
Query: 115 DDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DDG ++ + D R+F +++L+ + PP+S+LG + +T +E + + +K
Sbjct: 100 DDGTDMRYNDTRKFGRMKLVGMNYVDEPPLSQLGKEPF--DITEEELYRKIHHSSLAVKT 157
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
+LLDQ +SGIGN A+E+ + KI P A LSK+ L++
Sbjct: 158 VLLDQHIMSGIGNIYANEICFHMKIDPRTKASRLSKKRTRELIE 201
>gi|86604927|ref|YP_473690.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab]
gi|86553469|gb|ABC98427.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab]
Length = 283
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ +G I+ S+ + + +F + G + R+GK
Sbjct: 1 MPELPEVETVRRDLQRLTLGLCIL-SVEVLLPRTVAYPGKDEFAQGLAGSCLTQWQRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAI-YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L LDS MTG + +++G A +++ + L+ G E
Sbjct: 60 YLLGSLDSGAVLGVHLRMTGQLLWVQGSAPLPI--------------HTRVRLHLEQGWE 105
Query: 120 LSFTDKRRFAKVRLLN---DP-TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D R F ++ L+ +P T +P + LGP+ L + F +L K + IKA L
Sbjct: 106 LRFVDLRTFGQMWLVPAGVEPETVIPALQSLGPEPLSPAFSEAYFQAALQKSRRPIKAAL 165
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCA----TLLKCIKEVREALGVSLQ 231
LDQS ++G+GN ADE L+ + IHP A LS + + +L++ ++ E G +L+
Sbjct: 166 LDQSLVAGVGNIYADEALFLSGIHPSTPAAQLSDAAKSRLRESLIQVLRAGLEQRGTTLR 225
Query: 232 FYK-------CYFAKPYVHKKHRENKICRL 254
Y+ Y + +V+ RE CRL
Sbjct: 226 DYRDLRGLNGNYQGQAWVYG--REGDPCRL 253
>gi|422419165|ref|ZP_16496120.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067]
gi|422422084|ref|ZP_16499037.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171]
gi|313633102|gb|EFS00002.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067]
gi|313637952|gb|EFS03260.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171]
Length = 273
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRL------------MNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T++ F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++GIGN ADE+ ++AK+ P + A SLS + L + K + EA+ + + Y
Sbjct: 166 KLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLLFEATKSIMTEAVALGGSTVRTY 224
>gi|342217507|ref|ZP_08710149.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 135-E]
gi|341593854|gb|EGS36672.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 135-E]
Length = 277
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R A+E + +GK I + + +++ VS F+ G IL R+GK
Sbjct: 1 MPELPEVETIRTALESYIVGKNI-ERVTVGLPRLVKNVSVLTFQQKTQGCTILGIRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS--KYSKFFVELDDGL 118
L L L MTG + D P+ Y + L+ G
Sbjct: 60 YLTLLLSGSVHVVIHLRMTGRLLY---------------MDRLPAMMDYIHIYFRLNKGF 104
Query: 119 ELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R F L + T + LGPD T + K+K TIKA+LL
Sbjct: 105 -LVYHDVRTFGGFWLVPITGMTGIDGYDSLGPDGNSPKFTATYLYRLVQKRKSTIKAVLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ ++G+GN DE L+ AKI P + A LS +C L + I +V
Sbjct: 164 DQKVVAGLGNIYVDEALFLAKIRPDEKANVLSLHACKVLHEAINQV 209
>gi|254383290|ref|ZP_04998643.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp.
Mg1]
gi|194342188|gb|EDX23154.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp.
Mg1]
Length = 286
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 122/269 (45%), Gaps = 29/269 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + V + DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LWL P + G + + G + Q D K+ + V DD G
Sbjct: 61 KYLWL-----PLAGRDLSVLGHLGMSGQLLVQ-------PADAPDEKHLRIRVRFDDAAG 108
Query: 118 LELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL F D+R F + L N P +P I+ + D L + +L K+ T+K L
Sbjct: 109 TELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA---------- 225
LDQS ISG+GN ADE L++A++H + +L++ A LL +++V A
Sbjct: 169 LDQSLISGVGNIYADEALWRARLHYERPTATLTRPLSAELLGHVRDVMNAALAVGGTSFD 228
Query: 226 -LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE++ CR
Sbjct: 229 SLYVNVNGESGYFDR-SLDAYGREDEPCR 256
>gi|332670941|ref|YP_004453949.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484]
gi|332339979|gb|AEE46562.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484]
Length = 302
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G+ + + D V V DF + G+ + +A R+G
Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + RSA DE + + + LDDG
Sbjct: 61 KFLWLLLDDEDAALMAHLGMSGQLLV---------RSAQDLRDEVRHPHLRVRLALDDGS 111
Query: 119 ELSFTDKRRFAKVR---LLNDPTSVP------------PISELGPDALLEPMTVDEFTDS 163
L F D+R F + L+ P P P++ + D L + ++
Sbjct: 112 ALDFVDQRTFGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEA 171
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
+ ++ IK LLDQ+ +SGIGN ADE L++A++H + +L + L +EV
Sbjct: 172 VRARRTGIKRALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAEVERALDGAQEVM 231
Query: 224 EA 225
A
Sbjct: 232 TA 233
>gi|319638532|ref|ZP_07993294.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102]
gi|317400281|gb|EFV80940.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102]
Length = 275
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R IE H GKKI K I + D + G+ +L+ +R+ K
Sbjct: 1 MPELPEVETTLRGIEPHIDGKKIAKVTIRQFK--LRWPVHPDLAQILAGRKVLACNRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 59 YLIITFETGIL-LIHLGMSGSLRI---------FTADDERIATPDKHDHLDFVFDDGTVL 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L E + L +K +K L+D +
Sbjct: 109 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSEAFDANYLYQKLKTQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY-- 233
+ G+GN A+E L++A I PL+ A L+K+ CA L++ IK + E G +L+ +
Sbjct: 169 VVVGVGNIYANESLFKAGISPLRPANKLTKKECALLVETIKAILLRAIETGGSTLRDFVN 228
Query: 234 ----KCYFAKPY-VHKKHRE 248
YF + Y V+ +H E
Sbjct: 229 SDGKSGYFQQEYTVYGRHNE 248
>gi|429098673|ref|ZP_19160779.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 582]
gi|426285013|emb|CCJ86892.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 582]
Length = 269
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRW---PVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSEAFNGAYLHQKCVKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS+ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSENECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLLVYGREGEPCRV 246
>gi|315303333|ref|ZP_07873959.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596]
gi|313628294|gb|EFR96801.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596]
Length = 273
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ + R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-NQVIVHVPKMIKNTPPDEFVHMLVGQEMEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRL------------MNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T++ F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++GIGN ADE+ ++AK+ P + A SLS + L + K + EA+ + + Y
Sbjct: 166 KLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLLFEATKSIMTEAVALGGSTVRTY 224
>gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylase [Mycobacterium vanbaalenii
PYR-1]
gi|166215640|sp|A1T737.1|FPG_MYCVP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|119955982|gb|ABM12987.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium
vanbaalenii PYR-1]
Length = 293
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGRTVTAVRVHHPRAVRRHEAGPADLTARLLDTTITGTGRRG 60
Query: 60 KNLWLRL-DSPPFP----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL L D P GM+G + + V + R A
Sbjct: 61 KYLWLTLGDGADEPLARRESNFALVVHLGMSGQMLLGDVPNANHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F L + D + VP P++ + D L D
Sbjct: 111 -----LDDGTTLSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR 223
L +K IK LLDQ+ +SGIGN ADE L++AKI+ + A +S+ A LL +V
Sbjct: 166 LRRKHSEIKRQLLDQTVVSGIGNIYADESLWRAKINGARLASGVSRAKLAELLGAAADVM 225
Query: 224 -----------EALGVSLQFYKCYFAKPYVHKKHRENKICR 253
++L V++ YF + + RE + CR
Sbjct: 226 TDALAQGGTSFDSLYVNVNGESGYFDR-SLDAYGREGEPCR 265
>gi|229820102|ref|YP_002881628.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM
12333]
gi|229566015|gb|ACQ79866.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM
12333]
Length = 310
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 52/251 (20%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK----------VIDGVSASDFEASVLGK 50
MPELPEVE R + H +G++IV+ +A + ++D + + F A+V
Sbjct: 1 MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAV--- 57
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
R+GK WL LD+ GM+G + ++G A +D + P
Sbjct: 58 ------RRGKFCWLTLDTGRALLVHLGMSGQLLVRG---------AGQDAQDDPRHLRAR 102
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDA------------------LL 152
DDG EL F D+R F + + + P ++ GP LL
Sbjct: 103 IRFADDG-ELLFIDQRTFGYL----TSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLL 157
Query: 153 EP-MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKES 211
+P + +DE ++ ++ +K LLDQS +SG+GN ADE L++A++HP + L + +
Sbjct: 158 DPALRIDELVTAVRTRRSAVKRALLDQSLVSGVGNIYADEALWRARVHPERATRGLPRLA 217
Query: 212 CATLLKCIKEV 222
++L+ V
Sbjct: 218 VRSVLESAAGV 228
>gi|347752917|ref|YP_004860482.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1]
gi|347585435|gb|AEP01702.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1]
Length = 277
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ I + V + F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D + + + ++G R V D +E K++ G EL
Sbjct: 61 FLIFYTD-------HYALVSHLRMEG-------RYRVYDQNEPVEKHTHMIFHFQSGKEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ L + T L K + +K+ LLDQ
Sbjct: 107 RYKDVRKFGTMHLFLKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSLQFY 233
+ ISG+GN DE L++A I+P + A SL+K+ + +++ ++E E G +++ Y
Sbjct: 167 TVISGLGNIYVDESLFRAHIYPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSY 225
>gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
DSM 12680]
gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
DSM 12680]
Length = 267
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 25/251 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEA-SVLGKAILSAHRKG 59
MPELPEVE +R++ +GK + ++ D V DF + +G I+ R+G
Sbjct: 1 MPELPEVETIKRSLAP-IVGKTVTGLMVLRS----DIVKRCDFGVKNAVGSEIIDVTRRG 55
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L ++L GMTG R + + E + ++ + L+ +
Sbjct: 56 KYLVIKLSCARHLVVHLGMTG-------------RLLMVASSEPIAAHTHMVINLEGEKD 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ + D RRF + + D S LGP+ L +E L ++ +IK +LLDQ
Sbjct: 103 VRYQDPRRFGNISFVKDTGGF--FSSLGPEPLDPSFGPEELARRLKRRSASIKPVLLDQG 160
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYKC 235
++GIGN ADE+L+ A +HP + A L++ + L IKEV E G + + Y+
Sbjct: 161 VVAGIGNIYADEILFAAGLHPARGASELNEYEISRLHAAIKEVITRAIECRGTTFRDYRD 220
Query: 236 YFAKPYVHKKH 246
F +P + H
Sbjct: 221 GFNQPGQFQTH 231
>gi|291437028|ref|ZP_06576418.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
ghanaensis ATCC 14672]
gi|291339923|gb|EFE66879.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
ghanaensis ATCC 14672]
Length = 286
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLEGHRIGTADRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + V+ D K+ + V D L
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLL-------------VQPHDAPDEKHLRIRVRFADDL 107
Query: 119 --ELSFTDKRRFAKVRLLND-PTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L + P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 HTELRFVDQRTFGGLSLHDTTPDGLPDVIAHIARDPL-DPLFDDEAFHRALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A+IH ++ LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARIHYESPTAGFTRPRTLLLLGHVRDVMNA 218
>gi|383815761|ref|ZP_09971169.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serratia sp. M24T3]
gi|383295339|gb|EIC83665.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serratia sp. M24T3]
Length = 269
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G KI+ +++ + +++ VS S+ + ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGHKIMHAVVRN-SRLRWPVSQEIM--SLSDQVVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + + GM+G++ R ++T+ P+K+ + +D G L
Sbjct: 58 YLLVELKTG-WIIIHLGMSGSL-----------RVLAEETE--PAKHDHVDLVMDTGFVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D +S LGP+ L E + D KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTQDLEGSSVLSHLGPEPLSEDFHAEYLRDKSQKKKSPIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A I P + A SLS E A L+ IK V
Sbjct: 164 VVGVGNIYASESLFVAGISPDRPANSLSLEEYALLVATIKAV 205
>gi|339021284|ref|ZP_08645389.1| formamidopyrimidine-DNA glycosylase [Acetobacter tropicalis NBRC
101654]
gi|338751598|dbj|GAA08693.1| formamidopyrimidine-DNA glycosylase [Acetobacter tropicalis NBRC
101654]
Length = 279
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ G+ I +II + + ++DF + G+ ++ R+GK
Sbjct: 1 MPELPEVETVMRGMQIALQGRVIQTAIIRRYD--LRWRISADFSQRISGRKVIGFRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RL GM+G I V D+D+ P + + DDG
Sbjct: 59 YILMRLAGDLSVILHLGMSGRI--------------VLDSDKAPVPHEHVVLVTDDGKRC 104
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + +L P + ++ +GP+ L + + L++K +IK +LLDQ
Sbjct: 105 AFVDPRRFGMIDVLPTPMEDTYRLLAGMGPEPLDADFSSSTLENGLARKNASIKTVLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFY 233
++G+GN E L++A IHP A +L K+ L + I+ V EA+ G SL+ Y
Sbjct: 165 KIVAGLGNIYVCEALFRAGIHPETPAGTLKKKQIRLLHEAIQSVLTEAIAAGGSSLKDY 223
>gi|432336960|ref|ZP_19588422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus wratislaviensis IFP 2016]
gi|430776124|gb|ELB91585.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus wratislaviensis IFP 2016]
Length = 292
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I+SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIVSADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
IK LLDQ+ +SGIGN ADE L++A+IH + +S LL +EV REAL
Sbjct: 163 TEIKRALLDQTVVSGIGNIYADEALWRAQIHGNRLTDRVSGPKVRELLTAAREVMREAL 221
>gi|415884120|ref|ZP_11546149.1| formamidopyrimidine-DNA glycosylase [Bacillus methanolicus MGA3]
gi|387591915|gb|EIJ84232.1| formamidopyrimidine-DNA glycosylase [Bacillus methanolicus MGA3]
Length = 274
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + K+I + + + F+ +++G+ I+ R+GK
Sbjct: 1 MPELPEVETIRRTLIKLVLHKQIDRVSVFWPKMIKHPEEVEQFKDALIGQTIVQISRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + + + ++G R + ++ K++ DG EL
Sbjct: 61 LLI-------FYTNDYALVSHLRMEG-------RYTLFSKNDPVEKHTHVIFHFSDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L T PP+++LGP+ + T+ ++ L K +K LLDQ
Sbjct: 107 RYKDVRKFGTMHLYKKGTEFQYPPLNQLGPEPFSDSFTIGSLSEKLKKTNRKVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN DE L++AKIHP + A SL+ E L + I E
Sbjct: 167 KIVVGLGNIYVDEALFRAKIHPERIANSLTDEEIERLHREIIET 210
>gi|406997588|gb|EKE15618.1| hypothetical protein ACD_11C00116G0005 [uncultured bacterium]
Length = 298
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSI-IADDNKVIDGVSASDFEASVLGKAI 52
MPELPEV+ + G IV KSI IA + KV S ++ E + + I
Sbjct: 1 MPELPEVQTIVDDLNRKIKGDVIVGFWSDWLKSIKIARNGKVSLAASQNEVEKEIANRKI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT-DEWPSKYSKFF 111
L A R GKN+++ L MTG + IK ++ K++ KD + ++Y
Sbjct: 61 LQAWRIGKNMFIDLSGGKTIYIHLKMTGHLLIKKETESRKKKATKKDYFKDKVNQYIHHI 120
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKK-K 168
L G+ L F+D R+FAK+ L++ + I +LG DA+ T+ +F + L KK +
Sbjct: 121 WYLKSGITLEFSDLRKFAKIVLVDTDKIKDLAEIKKLGVDAMSPEFTLKKFKEILGKKSR 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
I +L++Q I+GIGN E+L++A I+P + SL+ E + K IK++
Sbjct: 181 APIGIVLMEQELIAGIGNIYRSEILFRAGINPQRKISSLTAEEIKEIYKNIKKI 234
>gi|307700916|ref|ZP_07637941.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16]
gi|307613911|gb|EFN93155.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16]
Length = 306
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 112/272 (41%), Gaps = 58/272 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--------------SDFEAS 46
MPELPEVE RR + H + N + VSA S F
Sbjct: 5 MPELPEVETIRRNLSSHLL------------NTCVTAVSAPTHPRSLRFQPGGFSRFHEL 52
Query: 47 VLGKAILSAHRKGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
++GK + S R+GK LWL L F GM+G + R A D P
Sbjct: 53 LVGKRLESVSRRGKFLWLELSGNQTAWCFHLGMSGQL-----------RLAAGDITALPH 101
Query: 106 KYSKFFVELDDGLELSFTDKRRFA--KVRLLNDPTSVPP-------------ISELGPDA 150
+ +F LD+GLEL F D+R F +VR L T P + + D
Sbjct: 102 ERLRF--TLDNGLELVFCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDV 159
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
L + V L + IK LLDQ+ +SGIGN ADE L+ A +HP A +LS E
Sbjct: 160 LDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGE 219
Query: 211 SCATLLKCIKEVREALGVSLQFYKCYFAKPYV 242
LL+ V +L+F F + YV
Sbjct: 220 DLRNLLEVAASVMRH---ALEFGGTSFDQLYV 248
>gi|386043875|ref|YP_005962680.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S]
gi|404410867|ref|YP_006696455.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC5850]
gi|345537109|gb|AEO06549.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S]
gi|404230693|emb|CBY52097.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC5850]
Length = 273
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKKIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|47096729|ref|ZP_00234314.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
1/2a F6854]
gi|254828201|ref|ZP_05232888.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N3-165]
gi|254912238|ref|ZP_05262250.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818]
gi|254936565|ref|ZP_05268262.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900]
gi|386047216|ref|YP_005965548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161]
gi|386053817|ref|YP_005971375.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland
1998]
gi|404413644|ref|YP_006699231.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC7179]
gi|47014913|gb|EAL05861.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 1/2a str. F6854]
gi|258600589|gb|EEW13914.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N3-165]
gi|258609160|gb|EEW21768.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900]
gi|293590214|gb|EFF98548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818]
gi|345534207|gb|AEO03648.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161]
gi|346646468|gb|AEO39093.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland
1998]
gi|404239343|emb|CBY60744.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC7179]
Length = 273
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|347534298|ref|YP_004840968.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504354|gb|AEN99036.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 283
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ R+ + + G KI KS+ K+I+ + A DFE + GK I+ R+GK
Sbjct: 4 MPELPEVQTVRQGLNKLVKGSKI-KSVEVLYPKMIN-IPAEDFEKKLAGKEIIQIDRRGK 61
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M G ++ E P K++ L DG EL
Sbjct: 62 YLLFRLSDDLTLVSHLRMEGKYEVQSEGT------------ERP-KHTNVVFHLTDGREL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F K+ L+ D + ++++GP+ + + D + + K IK LLDQ
Sbjct: 109 RYKDTRMFGKMALVKNEDVYKLSGLNKIGPEPTEQDLKFDYMKEIMHKSHRKIKGFLLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVREAL---GVSLQFY 233
S I+G+GN DEVL+ +KI+P Q LS + L IKE+ A+ G ++ Y
Sbjct: 169 SKIAGLGNIYCDEVLWLSKINPEQLTNELSDDEIRRLRANIIKEIAAAIKDHGTTVHSY 227
>gi|269978188|ref|ZP_06185138.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1]
gi|269933697|gb|EEZ90281.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1]
Length = 306
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 112/272 (41%), Gaps = 58/272 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--------------SDFEAS 46
MPELPEVE RR + H + N + VSA S F
Sbjct: 5 MPELPEVETIRRNLSSHLL------------NTCVTAVSAPTHPRSLRFQPGGFSRFHEL 52
Query: 47 VLGKAILSAHRKGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
++GK + S R+GK LWL L F GM+G + R A D P
Sbjct: 53 LVGKRLESVSRRGKFLWLELSGNQTAWCFHLGMSGQL-----------RLAAGDITALPH 101
Query: 106 KYSKFFVELDDGLELSFTDKRRFA--KVRLLNDPTSVPP-------------ISELGPDA 150
+ +F LD+GLEL F D+R F +VR L T P + + D
Sbjct: 102 ERLRF--TLDNGLELVFCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDV 159
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
L + V L + IK LLDQ+ +SGIGN ADE L+ A +HP A +LS E
Sbjct: 160 LDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGE 219
Query: 211 SCATLLKCIKEVREALGVSLQFYKCYFAKPYV 242
LL+ V +L+F F + YV
Sbjct: 220 DLRNLLEVAASVMRH---ALEFGGTSFDQLYV 248
>gi|83595128|ref|YP_428880.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC
11170]
gi|386351895|ref|YP_006050143.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodospirillum rubrum F11]
gi|123525348|sp|Q2RMQ2.1|FPG_RHORT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|83578042|gb|ABC24593.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rhodospirillum rubrum ATCC 11170]
gi|346720331|gb|AEO50346.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodospirillum rubrum F11]
Length = 281
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +G+++ S +A + D + GK + S R+ K
Sbjct: 1 MPELPEVETVRLGLTPALVGERL--SRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR+ P GM+G++ + +A P + E + GL +
Sbjct: 59 YLLLRMIDGPVALIHLGMSGSMTVGPLA-----------GHAEPGPHDHILFETEAGLRV 107
Query: 121 SFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+F D RRF + L +P ++ P +++LGP+ L E + L+ ++ IKA LLD
Sbjct: 108 TFRDPRRFGLI-TLAEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q ++G+GN E L++A I PL+ A S++ L+ I+ V
Sbjct: 167 QGVVAGLGNIYVSEALFRAGISPLRPAASVTGAWAEALVAAIRAV 211
>gi|153003174|ref|YP_001377499.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5]
gi|152026747|gb|ABS24515.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5]
Length = 276
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 23/216 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE A R + +G++I + I D K V + + F + G R
Sbjct: 1 MPELPEVEIAARNLRRWTMGRRIER--IEPDPKARYVFRPATPTAFARGLEGARFGPIRR 58
Query: 58 KGKNLWLRL--DSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
GK+L + + D P GMTG +++ ++ D PS++S+ L
Sbjct: 59 IGKHLLVSMKKDGAPVGLLAHLGMTGK-WLR------------REGDAAPSRFSRARFHL 105
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
DDG L F D R F ++R++ V I+ELGPD L + + +D ++L + ++ +K
Sbjct: 106 DDGAVLHFDDMRLFGRLRVVPGARFEEVREIAELGPDPLEQGIDLDRLAEALGRSRLAVK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
++DQ+ + G+GN VA E L+ AKI P + A SL+
Sbjct: 166 VRIMDQALLPGVGNIVASESLFLAKIDPRRQARSLT 201
>gi|411004905|ref|ZP_11381234.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces globisporus C-1027]
Length = 286
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARFGPALRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LW+ P + G + + G + V+ D K+ + + DD G
Sbjct: 61 KYLWV-----PIEEASASLLGHLGMSGQLL-------VQPADAPDEKHLRIRMRFDDALG 108
Query: 118 LELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKAL 174
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 109 TELRFVDQRTFGGLSLHGNTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V A
Sbjct: 168 LLDQSLISGVGNIYADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNA 218
>gi|254775599|ref|ZP_05217115.1| hypothetical protein MaviaA2_13153 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 262
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + ++ + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRHQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPDAL + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDAL--GLGLLDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQS ++G+GN + DE+ ++A+I P + L + L + + +V
Sbjct: 163 DQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQV 208
>gi|269127638|ref|YP_003301008.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM
43183]
gi|268312596|gb|ACY98970.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM
43183]
Length = 297
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 47/247 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V V A+DF A ++G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAAEVLHPRAVRRHVGGAADFTARLIGNTIGAARRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L + GM+G + + A + + V+ T F D
Sbjct: 61 KYLWLPLAEGGGAIVAHLGMSGQLLVGDPARARQRHLRVRLT----------FT--DGSH 108
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL----------------------LEPMT 156
+L F D+R F + ++EL PDA LEP
Sbjct: 109 DLRFVDQRTFGHLM----------VAELVPDAFGRAGKEAEAAVPAPVAHIAPDPLEPAF 158
Query: 157 VDE-FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
DE F +L +++ IK LLDQS ISG+GN ADE L++A++H + +L++ + +
Sbjct: 159 DDEAFYRALRRRRTGIKRALLDQSLISGVGNIYADEALWRARLHWARATENLTRAEVSRV 218
Query: 216 LKCIKEV 222
L+ ++EV
Sbjct: 219 LEGVREV 225
>gi|410464822|ref|ZP_11318216.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982070|gb|EKO38565.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 281
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ +G+ ++ + D KV+ G ++F A +G+ I + R+
Sbjct: 1 MPELPEVETIARALAPGLVGR-VITGVDVPDAKVLAGPKRRAEFAAMAVGRTIEAVGRRA 59
Query: 60 KNLWLRL--------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K L + L D P +F MTG +I A D + ++
Sbjct: 60 KLLLVNLGPRPQVPGDGPAVLAFHLKMTGRFHI-----------APPDAPD--PDRARLL 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPP---ISELGPDALLEP--MTVDEFTDSLSK 166
L DG L F D RRF R L P ++ + LGP EP MT D F ++L++
Sbjct: 107 TRLSDGNTLVFADLRRFGTARALT-PEALDAWDFYASLGP----EPWDMTPDAFEEALAR 161
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK 217
K IKA LLDQ+ I+GIGN ADE L+ A+I P A +L+ LL+
Sbjct: 162 KSTRIKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKALTPSQRRRLLE 212
>gi|379727018|ref|YP_005319203.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius
DAT561]
gi|376317921|dbj|BAL61708.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius
DAT561]
Length = 274
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + +GK I + + +++I+ F+ ++G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLW-SRIIEQPEVETFQKQLIGQKIKRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + + ++G T K D+ +K++ D +L
Sbjct: 60 FLIFKLTN-------WDLISHLRMEGKYETHQK-------DDPITKHTHVIFTFSDDSQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + I+ LGP+ LE V+EF +L+K IK LLL+Q
Sbjct: 106 RYLDVRKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ AKIHP + A +LS L K I ++
Sbjct: 166 KLVTGLGNIYVDEALWTAKIHPEKPANTLSVSEVNRLHKAIIDI 209
>gi|432374394|ref|ZP_19617425.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE11]
gi|430893816|gb|ELC16140.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE11]
Length = 269
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I +T+ + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRI----LTEERP---------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKDLEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|398782207|ref|ZP_10546025.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces auratus AGR0001]
gi|396996944|gb|EJJ07923.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces auratus AGR0001]
Length = 308
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + + + A+DF A + G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTIDAVEVHHPRSIRRHTAGAADFAARLKGLRIGAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTG------AIYIKGVAVTQY----KRSAVKDTDEWPSKYSK 109
K LWL + P+ Q G G+A+ + + V+ K+ +
Sbjct: 61 KYLWLPVTGG-GPASQTAAEGISPMVTPSVTHGLAILAHLGMSGQLLVQPEGAPDEKHLR 119
Query: 110 FFVELDD--GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE- 159
V DD G EL F D+R F + L + +VP ++ PD + L+P D
Sbjct: 120 IRVRFDDALGTELRFVDQRTFGGLSLHD---TVPGAADHLPDVIAHIARDPLDPAFDDAA 176
Query: 160 FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
F D+L +++ TIK LLDQ+ ISG+GN ADE L+++++H + + ++ A LL +
Sbjct: 177 FHDALRRRRTTIKRALLDQTLISGVGNIYADEALWRSRLHYERPTATFTRPRTAELLGHV 236
Query: 220 KEVREA-----------LGVSLQFYKCYFAKPYVHKKHRENKICR 253
++V A L V++ YF + + RE++ CR
Sbjct: 237 RDVMNAALAVGGTSFDSLYVNVNGESGYFER-SLDAYGREDEPCR 280
>gi|118466096|ref|YP_882333.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium avium 104]
gi|118167383|gb|ABK68280.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein
[Mycobacterium avium 104]
Length = 262
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + +Y + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRYQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPD+L + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDSL--GLGLRDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+QS ++G+GN + DE+ ++A+I P + L + L + + +V
Sbjct: 163 EQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQV 208
>gi|422512830|ref|ZP_16588957.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA2]
gi|313807891|gb|EFS46372.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA2]
Length = 256
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+Q+ +SGIGN ADE L++ + HP LS+ LL+ +V
Sbjct: 168 NQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDV 213
>gi|341615546|ref|ZP_08702415.1| DNA-formamidopyrimidine glycosylase [Citromicrobium sp. JLT1363]
Length = 260
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R + C+ + I + DD I+ + + ++G HR GK
Sbjct: 1 MPELPEAEANRLRVARDCLNRTIEAAEPGDDTDHIE-LPGDNERGRLVGHQFTQTHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + P+ + GMTG++ D D+ P Y+KF + + L
Sbjct: 60 LIFAGSGTGPWIAVHLGMTGSLR-------------PFDADDGPPDYAKFVIRFEGERRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++ P + E GPDA ++ D F + + + IK+ L+ Q
Sbjct: 107 AFRCPRKLGWVRVVDSPQAEIDRIEFGPDAF--EISRDVFVEVIGTSRGAIKSALMQQKK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
++GIGN +DE+L++ I P + L +E + ++ + A+
Sbjct: 165 LAGIGNLWSDEILFRLGIDPQRKGTQLDEEQLGEMYDAMRNILRAV 210
>gi|332687081|ref|YP_004456855.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC
35311]
gi|332371090|dbj|BAK22046.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC
35311]
Length = 274
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + +GK I + + +++I+ F+ ++G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLW-SRIIEQPEVETFQKQLIGQKIKRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + + ++G T K D+ +K++ D +L
Sbjct: 60 FLIFKLTN-------WDLISHLRMEGKYETHQK-------DDPITKHTHVIFTFSDDSQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + I+ LGP+ LE V+EF +L+K IK LLL+Q
Sbjct: 106 RYLDIRKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN DE L+ AKIHP + A +LS L K I ++
Sbjct: 166 KLVTGLGNIYVDEALWTAKIHPEKPANTLSVSEVNRLHKAIIDI 209
>gi|289434844|ref|YP_003464716.1| hypothetical protein lse_1479 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171088|emb|CBH27630.1| fpg [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 273
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRL------------MNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T++ F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++GIGN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLVFEATKNIMTEAVALGGSTVRTY 224
>gi|377578559|ref|ZP_09807536.1| formamidopyrimidine-DNA glycosylase [Escherichia hermannii NBRC
105704]
gi|377540145|dbj|GAB52701.1| formamidopyrimidine-DNA glycosylase [Escherichia hermannii NBRC
105704]
Length = 269
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +I+ + SD ++ K ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAIVRNGRLRW---PVSDEIHALSDKPVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ + E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRVL--------------PHEMPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF ++ LGP+ L + + ++KK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTASLEGHNVLAHLGPEPLSDEFNGEYLHQRCARKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLSKE C L IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDKLAQSLSKEECELLATAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|395228979|ref|ZP_10407297.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. A1]
gi|424732342|ref|ZP_18160920.1| phosphopantetheine adenylyltransferase [Citrobacter sp. L17]
gi|394717685|gb|EJF23369.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. A1]
gi|422893001|gb|EKU32850.1| phosphopantetheine adenylyltransferase [Citrobacter sp. L17]
Length = 269
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSQDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICR 253
KP + RE + CR
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR 245
>gi|290893965|ref|ZP_06556941.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J2-071]
gi|404408003|ref|YP_006690718.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2376]
gi|290556503|gb|EFD90041.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J2-071]
gi|404242152|emb|CBY63552.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2376]
Length = 273
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F+ + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFSTGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|365850851|ref|ZP_09391305.1| DNA-formamidopyrimidine glycosylase [Lactobacillus parafarraginis
F0439]
gi|363718100|gb|EHM01455.1| DNA-formamidopyrimidine glycosylase [Lactobacillus parafarraginis
F0439]
Length = 280
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 25/254 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G + V S+ K+++ + DF A++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQ-VTSVDVLYPKMVN-LPPEDFAAALKDRIIEQIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIK--GVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
L+LR+ M G ++ G +T K++ L DG
Sbjct: 59 YLFLRMSGHQTIVSHLRMEGNYDVQPEGTPLT---------------KHTHIVFHLADGR 103
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L + D R+F ++ L+ +V + +GP+ +T+D SK + IK LL
Sbjct: 104 QLRYNDSRKFGRMTLVETGQEMTVAGLKTIGPEPTESDLTLDYMKKIFSKSRKVIKPFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL---GVSLQF 232
DQS I+G+GN ADEVL+ +KI+P Q +LS TL K I E++ A+ G ++
Sbjct: 164 DQSKIAGLGNIYADEVLWLSKINPKQPVNTLSLSELKTLRKNIIHEIQIAIAGHGTTVHS 223
Query: 233 YKCYFAKPYVHKKH 246
Y + + + H
Sbjct: 224 YSTAYGEAGQFQNH 237
>gi|334133629|ref|ZP_08507174.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF7]
gi|333608842|gb|EGL20129.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF7]
Length = 286
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 28/243 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + +GK I + + ++I + A +L G+ I R+G
Sbjct: 1 MPELPEVETVRRTLSRLVVGKTI-QEVEVRLKRIIQKPEEPELFADLLEGQTIQGVSRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---RSAVKDTDEWPSKYSKFFVELDD 116
K L LD GV V+ + R + + + ++ D
Sbjct: 60 KFLRFLLDD-----------------GVLVSHLRMEGRYGLYEASDEVEPHTHVIFRFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + S P+ +LG + L E T + F ++ K+ IK L
Sbjct: 103 GTELRYRDVRQFGTMHLFAGEEDLSSKPLHKLGIEPLDESFTFEAFRQAIGKRSTKIKPL 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSL 230
LL+Q+YI G+GN DE L++A IHP + A SL++ L + I + EA G S+
Sbjct: 163 LLNQAYIVGLGNIYVDEALFRAGIHPEREAASLTRLELQRLHEAIVHTLQSSVEAGGSSI 222
Query: 231 QFY 233
+ Y
Sbjct: 223 KSY 225
>gi|312868766|ref|ZP_07728958.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3]
gi|417885647|ref|ZP_12529799.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris F0423]
gi|311095752|gb|EFQ54004.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3]
gi|341595143|gb|EGS37818.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris F0423]
Length = 277
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+KI + + + V DF +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAKGRKINAIDVYYGKTITNDVE--DFRQALIGQTIEDIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G Q + K++ + DG EL
Sbjct: 59 YLLFRF------SNNLTMVSHLRMEGKYYNQPIGGPI-------DKHTHVVFQFTDGTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D +V + LGP+ + F D L + + IK LL+Q
Sbjct: 106 CYHDTRKFGRMTLVETGDEKTVGGLKTLGPEPTAADFKLAFFQDELGRSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+++G+GN DEVL+ +KI+P Q A SL+ + A L
Sbjct: 166 RHVAGLGNIYVDEVLWMSKINPEQPANSLTPDQAAVL 202
>gi|300714652|ref|YP_003739455.1| formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661]
gi|299060488|emb|CAX57595.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661]
Length = 269
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 25/226 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN----KVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE +RR IE H +G I+ +I+ +D ++ S SD + +LS
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNDRLRWPVSLEIQSLSD-------QPVLSVQ 53
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+ K L + L + GM+G++ + + P+K+ + + +
Sbjct: 54 RRAKYLLIELPHG-WIIIHLGMSGSLRVLPEELP-------------PAKHDHVDLVMSN 99
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G L +TD RRF D + ++ LGP+ L + + + D K+ +K L+
Sbjct: 100 GKVLRYTDPRRFGAWLWCTDLAASNVLAHLGPEPLHDAFSAEYLFDKSRNKRTPVKPWLM 159
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
D + G+GN A E L+ A IHP + A++L+++ A L+K IK V
Sbjct: 160 DNKLVVGVGNIYASESLFVAGIHPDRPAMTLTQDEAALLVKTIKAV 205
>gi|347548947|ref|YP_004855275.1| putative formamidopyrimidine-DNA glycosylase [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982018|emb|CBW86003.1| Putative formamidopyrimidine-DNA glycosylase [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 273
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQQIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRL------------MNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T++ F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKFGEVDTNSIKKLGPEPLTPTFTLEAFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++GIGN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLVFEATKSIMTEAVALGGSTVRTY 224
>gi|408828138|ref|ZP_11213028.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces somaliensis DSM 40738]
Length = 289
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V + DF + + G + A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAVEVLHPRAVRRHLGGGIDFASRLTGHRVGVARRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL LD GM+G + ++ + V+ + DD
Sbjct: 61 KYLWLPLDDTNASVLGHLGMSGQLLVQPETAPDERHLRVR-------------IRFDDAL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDAIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA-------- 225
LLDQS ISG+GN ADE L+++++H + L++ LL I++V +A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRLHYDRPTALLTRPRSYELLGHIRDVMDAALAAGGTS 226
Query: 226 ---LGVSLQFYKCYFAKPYVHKKHRENKICR 253
L V++ YF + + RE + CR
Sbjct: 227 FDSLYVNVNGESGYFDRS-LDAYGREGEPCR 256
>gi|406957988|gb|EKD85792.1| Formamidopyrimidine-DNA glycosylase [uncultured bacterium]
Length = 288
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + ++ +G KI+ D N + + D +++G + R GK
Sbjct: 1 MPELPEVETIRLGLSKYLVGHKIL-----DVNVKLKRIFTGD-PKNIIGAKVEKIERFGK 54
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT--DEWPSKYSKFFVELDDGL 118
L + L++ + +TG I +A + + + + + P+K++ +LD +
Sbjct: 55 GLVINLNNSYCIAIHIKLTGQIIYSDLAFVRNRNIHLSQSKVGQLPNKFTHVIFDLDKQV 114
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDAL----LEPMTVDEFTDSLSKKKITIK 172
+L + D R+F ++++ +D ++ +LGP+ + P+T+++F LSK +++K
Sbjct: 115 KLYYNDIRQFGWIKIVKKDDLKTLQFFKDLGPEPIPSSGQPPLTLEQFKKILSKSGLSVK 174
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L++DQ I G+GN A++ L+ A I P + A ++K L + I EV
Sbjct: 175 VLIMDQKRIGGVGNIYANDALFLAGIDPRRKAKDITKNEVKKLFEAILEV 224
>gi|335430395|ref|ZP_08557289.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Haloplasma contractile SSD-17B]
gi|334888162|gb|EGM26466.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Haloplasma contractile SSD-17B]
Length = 290
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 22/226 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADD--NKVIDGVSASDFEASVLGKAILSAHRK 58
+PELPEVE R+ + K + KSI A D + I S F+ +++ + I R+
Sbjct: 2 LPELPEVETVRQTLR----TKILDKSIKAVDILYEPIIKTDLSHFKQTIINQTINEIERR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK + ++LD S M G YI R+++ +T SK+ LDDG
Sbjct: 58 GKYILIKLDDHYLIS-HLRMEGKYYI---------RNSLHET----SKHEHVIFHLDDGT 103
Query: 119 ELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L + D R+F + L L + P+ +LG + E +T L K K IK LL
Sbjct: 104 QLRYHDVRKFGTMHLKSLEEVHIGEPLEKLGYEPHDELLTFSYLKPKLKKSKRPIKTALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ I+G+GN DEV++ +K+HP Q+A SLS +++ K+V
Sbjct: 164 DQTIIAGLGNIYVDEVIFLSKLHPEQSADSLSDRDIKQIIQASKQV 209
>gi|336066253|ref|YP_004561111.1| formamidopyrimidine-DNA glycosylase [Erysipelothrix rhusiopathiae
str. Fujisawa]
gi|334296199|dbj|BAK32070.1| formamidopyrimidine-DNA glycosylase [Erysipelothrix rhusiopathiae
str. Fujisawa]
Length = 273
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 16/220 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ K+I SI K+++ S E S++G + HR+GK
Sbjct: 1 MPELPEVETIIRTLEKSLKDKQI-DSIDFIYPKLLEDQSEYPLE-SLVGSNFQAFHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LW + + M G ++ D D+ PSK++ + D G +
Sbjct: 59 YLWFEMSNGLHWILHLRMEGKFHLY-------------DYDKAPSKHTHCVINYDGG-TI 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F+++ ++ +P LG + + + + +K +LLDQS
Sbjct: 105 HYLDTRKFSRMAIVKEPLKYLETKNLGLEPFDTNLNGEYIYQKIHHSNRVMKTILLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
I+GIGN ADE+L++ +IHPL T ++ + C +L++ K
Sbjct: 165 IAGIGNIYADEILFETQIHPLTTGSKITMKQCDSLVETTK 204
>gi|319651808|ref|ZP_08005933.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
gi|317396460|gb|EFV77173.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
Length = 275
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++E IGK I + V F+ ++ G+ R+GK
Sbjct: 1 MPELPEVETVRRTLQELVIGKTIAHVSVFWPKMVKHPEELVQFKDALAGQIFQDIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + + + ++G R + +E K++ DG EL
Sbjct: 61 FLILY-------TIDYALVSHLRMEG-------RYGLFLKEEPVDKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P++ LGP+ E T ++ L++ IK LLDQ
Sbjct: 107 RYKDVRKFGTMHLYAKGEEFKTLPLAHLGPEPFGEEFTAEDLAARLARTTRNIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL 226
I G+GN DE L++++IHP + A SL+K TL K I + +REA+
Sbjct: 167 KTIVGLGNIYVDEALFRSRIHPERAANSLTKSELETLHKEIADTLREAV 215
>gi|385677311|ref|ZP_10051239.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis sp. ATCC 39116]
Length = 259
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + H +GK+I + D V+ GVSA ++ + R+GK
Sbjct: 1 MPELPDVEGFRRTLAAHGVGKRIT-GVTTLDAGVLRGVSARRLRETLRHQRFGEPRRRGK 59
Query: 61 NLWLRLDSPPFPS-FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + +D P FGMTG++ S + D + ++ + DDG E
Sbjct: 60 WLIVPVDGRPATMVLHFGMTGSLEW----------SELDDRN----RHDRVIFAFDDG-E 104
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L + D R+ +RLL D +++ GPDAL P + F L +++ IK LL DQ
Sbjct: 105 LRYRDMRKLQGLRLLAGDAELDRLLADTGPDALDVPK--ERFRVLLGRRR-GIKQLLTDQ 161
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ ++G+GN +ADE+L++A++ P A L + L + ++EV
Sbjct: 162 AVLAGLGNLLADEILWRARLAPRVRAADLDGTAADRLHREMREV 205
>gi|384160437|ref|YP_005542510.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens TA208]
gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens TA208]
Length = 276
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFNMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A IHP A SLS L IK+ ++EA+ + Y
Sbjct: 167 KAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAIDAGGSTVRSYI 226
>gi|255525116|ref|ZP_05392060.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans
P7]
gi|296188081|ref|ZP_06856473.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans
P7]
gi|255511170|gb|EET87466.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans
P7]
gi|296047207|gb|EFG86649.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans
P7]
Length = 277
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E G+KI K + + +VI A F +V+G+ I+ R+GK
Sbjct: 1 MPELPEVETVKRVLEPQIKGQKI-KYVDISNKQVIAYPDAEAFCDNVIGQTIVGIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + +S MTG + I ++Y+++ K++ L +G EL
Sbjct: 60 FLNILFESGDRMVLHLRMTGCLLI---TPSEYEKA----------KHTHVVFSLKNGNEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D RRF + L ++ + I++LG + + +T + + L KKK IK LL+Q
Sbjct: 107 RYIDTRRFGRFWFLKKDEEDTFTGINKLGLEPFDKNLTGEYLHNCLLKKKKPIKECLLEQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
S ++GIGN DE+L+ A + P + A SL+ E L K I
Sbjct: 167 SMVAGIGNIYGDEILFAAGLCPSRPANSLTCEEYDRLAKQI 207
>gi|389856233|ref|YP_006358476.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST1]
gi|403061868|ref|YP_006650084.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus suis S735]
gi|353739951|gb|AER20958.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST1]
gi|402809194|gb|AFR00686.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus suis S735]
Length = 275
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + G A+ F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTG--ATVFCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKQLAKSRKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSL 230
LLDQS ++G+GN DEVL++A++HP Q + LS E A L + EV E G ++
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFRAQVHPAQASNQLSAEQAADLRQATIEVLQLGIEKGGSTI 220
Query: 231 QFYK 234
+ YK
Sbjct: 221 RTYK 224
>gi|297583658|ref|YP_003699438.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens
MLS10]
gi|297142115|gb|ADH98872.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens
MLS10]
Length = 286
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + E IG+ I + + + F + G+ I S RKGK
Sbjct: 1 MPELPEVETVRQTLTELLIGRTIEDVWVGWPAMIKEPDDVERFALMLTGQTIQSIGRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + A+K+ SK++ + DG L
Sbjct: 61 FLKLYLDDCVLVS-HLRMEG-------------KYALKEAGSERSKHTHVVIRFTDGTAL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDAL-LEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + T PP+S++GP+ + + +T DE L K +KA LLD
Sbjct: 107 HYADVRKFGTMHAFVKGTEEQRPPLSKVGPEPVGKDRITADELGTRLKKTTRAVKAALLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL---GVSLQFY 233
QS ++G+GN DE L++A IHP A +L + LL I + ++EA+ G S++ Y
Sbjct: 167 QSLVAGLGNIYVDEALFRAGIHPAVPAHTLPDKLIPVLLSAISDTLQEAIDQGGTSIRSY 226
>gi|381401573|ref|ZP_09926471.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Kingella kingae PYKK081]
gi|380833427|gb|EIC13297.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Kingella kingae PYKK081]
Length = 272
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKIV++I+ + SD + + I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPK--LRWQMPSDLADILQHQTIRQCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ GM+G++ I +DT K+ +DG L
Sbjct: 59 YLLIQLDTGVL-LIHLGMSGSLRI------------FRDTLPDAGKHDHADFVFEDGTVL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT-----DSLSKKKITIKALL 175
+ D RRF + L V EL + +EP+ DEFT D L K IK +
Sbjct: 106 RYHDPRRFGAILWL---AGVAEHHELLRNLGVEPLN-DEFTADYLFDRLRGKHRAIKLAI 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+D + + G+GN A+E L+QA I P + A SLSK+ CA L+ IK++
Sbjct: 162 MDNAIVVGVGNIYANESLFQAAISPNRPAQSLSKQECADLVAAIKQI 208
>gi|384101472|ref|ZP_10002511.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus imtechensis RKJ300]
gi|383841026|gb|EID80321.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus imtechensis RKJ300]
Length = 292
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
IK LLDQ+ +SGIGN ADE L++A+IH + +S LL +EV REAL
Sbjct: 163 TEIKRALLDQTVVSGIGNIYADEALWRAQIHGNRLTDRVSGPKVRELLTAAREVMREAL 221
>gi|340028393|ref|ZP_08664456.1| formamidopyrimidine-DNA glycosylase [Paracoccus sp. TRP]
Length = 281
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H + I ++ + + D + G + R+ K
Sbjct: 1 MPELPEVETVRRGLEPHLTNRIITRAEARRPD--LRRPLPPDMVQVLTGARVTGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ GM+G + I+G + + R D P ++ + ++G +
Sbjct: 59 YILADLEDRGSLLLHLGMSGRMLIEGESQGDFHR----DPAILP-RHDHVVLWTEEGTRI 113
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F D RRF + L+ S P ++ LGP+ L + T ++ +L+ +++ IKA LLDQ
Sbjct: 114 TFNDARRFGLIDLVAPGESHPLLAHLGPEPLSDTFTPEKLLQALAGRRMPIKAALLDQRI 173
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYK 234
++G+GN E LY+A I P + A ++++ A L+ ++ V E A G SL+ ++
Sbjct: 174 VAGLGNIYVSEALYRAGIDPRRLAGAVAEAEIAALVNHVRAVLEEAIAAGGSSLRDHR 231
>gi|315655501|ref|ZP_07908400.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC
51333]
gi|315490156|gb|EFU79782.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC
51333]
Length = 321
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 37/276 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--SDFEASVLGKAILSAHRK 58
MPELPEVE RR +E+ +G +++ + + ++ ++G + +A R+
Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITELRTGLVGARLGAAVRR 60
Query: 59 GKNLWLRLDSPPFPS--------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP--SKYS 108
GK LW L S PS GM+G + ++ T +++ A P S+ +
Sbjct: 61 GKFLWFSL-SGEVPSSEGPLALVIHLGMSGQLRVESRGATLHRKEAATSPQVAPQYSRET 119
Query: 109 KFFVE------LDDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEF- 160
+ + LD+ +L F D+R F V L PT+ +G L P+ V+
Sbjct: 120 RLLLHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPLGVEHIA 179
Query: 161 ----------TDSLSKKKITIKAL---LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSL 207
TD + K + + +A+ LLDQ +SGIGN ADE L+ A+IHP SL
Sbjct: 180 RDVLDPCRDTTDFVKKTRASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAPGRSL 239
Query: 208 SKESCATLLKCIKEVREALGVSLQFYKCYFAKPYVH 243
S LL + V +G +L F F + YV+
Sbjct: 240 SDRKLRELLGAVAAV---MGQALVFGGTSFDRLYVN 272
>gi|297181411|gb|ADI17600.1| formamidopyrimidine-DNA glycosylase [uncultured delta
proteobacterium HF0130_19C20]
Length = 272
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +G I I +N ++ G F+ ++G+ R+ K
Sbjct: 1 MPELPEVETVVRELSNEILGDSISSVDIFRNNPIVQG-DLEAFQKQLIGRKFKYVTRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L F MTG V D + PSKY++ + L G +
Sbjct: 60 YLIFHLHPHGFMVAHMRMTGKF-------------IVCDPIDMPSKYNRVWFHLKSGRLM 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R F + + + + +++LG + E + V+ F +S K IK++LLDQ
Sbjct: 107 IFDDVRCFGTLEVYENLSDSKALNKLGIEPFSEDLNVNYFKSKVSSSKREIKSILLDQKI 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
I+G+GN E+L+++KI PL+T+ ++ + + ++K + V E
Sbjct: 167 IAGLGNIYVSEILFRSKISPLRTSETIRNKEWSQIIKYTQSVLE 210
>gi|389573842|ref|ZP_10163913.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. M 2-6]
gi|388426412|gb|EIL84226.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. M 2-6]
Length = 297
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 21 MPELPEVETVRRTLQRLVKGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G +Y+ V +T E K+ DG EL
Sbjct: 81 FLLFHLD-------HYVMVSHLRMEG----KYR---VHETGEPYDKHVHVVFTFTDGTEL 126
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + + T D + L K +K LLDQ
Sbjct: 127 RYHDVRKFGTMHLFQPGEEKKELPLSQLGYEPFSDSFTPDYLWEQLKKTSRVVKTALLDQ 186
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ G+GN DEVL+++ IHP A LS SC L K I
Sbjct: 187 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLASCKVLHKHI 227
>gi|227488593|ref|ZP_03918909.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091487|gb|EEI26799.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 273
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEA---SVLGKAILSAHR 57
MPELPEVE RR ++ +G + V V+ +A EA + G+ I R
Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSV------SVLHPRAARSTEALAPRLAGREICGTGR 54
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LWL LD M+G + I TQ R S +++ ELD G
Sbjct: 55 RGKFLWLVLDGAEALVIHLRMSGQMRI-----TQTARPV--------SPHTRIVAELD-G 100
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + F D+R F L +P ++ + PD L + + L + + +K LL
Sbjct: 101 LTVQFVDQRTFGSWSLSELVGGLPVTLAHIAPDLLDASLDIRGVAKHLKRGRGELKPALL 160
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+Q +SGIGN ADE+L++A++HP QT +S LL ++V R+AL
Sbjct: 161 NQGIVSGIGNIYADEMLWRARLHPRQTRSHVSPHRLTELLLAGQDVMRDAL 211
>gi|237728932|ref|ZP_04559413.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2]
gi|226909554|gb|EEH95472.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2]
Length = 269
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRN-GRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + SLSK+ C L++ IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLTSSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICR 253
KP + RE + CR
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR 245
>gi|217964289|ref|YP_002349967.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23]
gi|386008335|ref|YP_005926613.1| mutM [Listeria monocytogenes L99]
gi|386026937|ref|YP_005947713.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes M7]
gi|217333559|gb|ACK39353.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23]
gi|307571145|emb|CAR84324.1| mutM [Listeria monocytogenes L99]
gi|336023518|gb|AEH92655.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes M7]
Length = 273
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|403745854|ref|ZP_10954602.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121198|gb|EJY55522.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 300
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 20/244 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + E G IV + ++I S +DF G+ I + R+GK
Sbjct: 12 VPELPEVETVRRGLAELVSGDVIV-DVQVSLPRIIRYPSVADFVDRATGRTIRAIGRRGK 70
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L D P+ + + ++G QY+ V T E + ++ L G +L
Sbjct: 71 --YLLFDLAPYT-----LVSHLRMEG----QYR---VVPTSEPLALHTHVIFRLASGRDL 116
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + LL S P + LGP+ +T SL ++ +KA+LLDQ+
Sbjct: 117 RYRDVRQFGTMDLLLPDESRPSGLQTLGPEPFDSNLTPTLLRSSLQRRTGPVKAVLLDQT 176
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
I+G+GN DE L+ + IHPL+ A L + A LL I++V EA G S++ Y+
Sbjct: 177 IIAGLGNIYVDEALFLSGIHPLEPANRLGPKRLARLLSSIRDVLGRAIEAGGSSIRTYQD 236
Query: 236 YFAK 239
+ +
Sbjct: 237 GYGR 240
>gi|443289364|ref|ZP_21028458.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil
and 5-hydroxymethyluracil [Micromonospora lupini str.
Lupac 08]
gi|385887517|emb|CCH16532.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil
and 5-hydroxymethyluracil [Micromonospora lupini str.
Lupac 08]
Length = 293
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
+PELPEVE R+ + + G++I + V + A VL G+ +L A R+G
Sbjct: 9 VPELPEVETVRQGLAQWVTGRRIASVEVRHPRAVRRHLPGDVHFADVLAGRTVLDARRRG 68
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ V+ F D+G E
Sbjct: 69 KYLWLPLDSGDAIVGHLGMSGQMLLQPPGTPDETHLRVR------------FRFADEGPE 116
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D + + F +L +++ +K LLDQ
Sbjct: 117 LRFVDQRTFGGLAVSEGGADLPAEIAHIARDPMDPEFSDAAFVAALRRRRTEVKRALLDQ 176
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR-----------EALG 227
+ ISG+GN ADE L++A +H + +L+ + LL +++V +AL
Sbjct: 177 TLISGVGNIYADEALWRAGLHGARPTDALTGPAAQRLLGHVRDVLAEAIKVGGTSFDALY 236
Query: 228 VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + ++ RE + CR
Sbjct: 237 VNVNGESGYFDR-ALNAYGREGEPCR 261
>gi|51244765|ref|YP_064649.1| formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila
LSv54]
gi|81692916|sp|Q6APT2.3|FPG_DESPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|50875802|emb|CAG35642.1| probable formamidopyrimidine-DNA glycosylase [Desulfotalea
psychrophila LSv54]
Length = 277
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I G+ IV ++ ++ + + GK I R+GK
Sbjct: 1 MPELPEVEIILRGISPLICGRTIV-AVGGSGKQLRLPLPLPELNRDASGKEITRLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L+ GMTG + V ++ +K+ F+ LD+ E
Sbjct: 60 YISIFLNDGGILVLHLGMTGQL-------------GVFPKEQARAKHDHFWCRLDNNQEF 106
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D RRF +R L S +LGP+ L E T D + K + IK ++
Sbjct: 107 RYNDTRRFGSIRFLPAGKSRMLQESLYQKLGPEPLGETFTADYLRRAAEGKSLAIKNFIM 166
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
D + GIGN A+E L++A IHP ++ S+ +E L +CI+++
Sbjct: 167 DSHIVVGIGNIYANESLFKAAIHPARSVQSIEQEEWEKLARCIQQI 212
>gi|432836583|ref|ZP_20070113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE136]
gi|431381979|gb|ELG66328.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE136]
Length = 269
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + FGM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHFGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|417092558|ref|ZP_11957174.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis R61]
gi|353532237|gb|EHC01909.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis R61]
Length = 275
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWP-SKYSKFFVELDD 116
L IY+ + + R K D+ P +K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K K IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVGAYFISRKIGPEPTEEDFVLEEFALKLAKSKKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
LLDQS ++G+GN DEVL++A++HP Q + LS E A L
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAQVHPAQASNQLSAEQVADL 201
>gi|336395182|ref|ZP_08576581.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus farciminis KCTC 3681]
Length = 275
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + + G+KI I N + V F V G + R+ K
Sbjct: 1 MPEMPEVETVRRGLIDQVKGRKITHVEIRYQNLITGDVDQ--FVEFVTGATVTDIGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ M G R + + K+S LD+G +L
Sbjct: 59 FLLIHLDNGYTIISHLRMEG-------------RYKISNDPSAIDKHSHAIFTLDNGEKL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L N D ++ I +LGP+ L + T + + + + IK +LLDQ
Sbjct: 106 IYNDVRKFGRMQLWNTDDLSNNKSIQKLGPEPLSKDFTFENLKPRIIRHRKDIKTVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI-KEVREALGVSLQFYKCYF 237
S +SG+GN DEVL++ KIHP +A L+ + +++ +E+R+A+ + Y
Sbjct: 166 SVMSGLGNIYVDEVLWKVKIHPETSANHLTDKDIQKIIEASNEEMRQAIQAGGSTVRSYI 225
Query: 238 AKPYVHKKHRENKI 251
HK + +N +
Sbjct: 226 -DANGHKGNMQNSL 238
>gi|443623853|ref|ZP_21108341.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
gi|443342634|gb|ELS56788.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
Length = 286
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G + + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRSVADAEVLHPRAVRRHIAGADDFAHRLKGHRVGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L D+ GM+G + ++ DE K+ + V D
Sbjct: 61 KYLWLPLEDTNQSILAHLGMSGQLLVQPHTAP----------DE---KHLRIRVRFADVL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDVIAHIARDPL-DPLFDDEGFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++ ++H + + ++ LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRTRLHYDRPTATFTRPRTLELLGHVRDVMNA 218
>gi|357467643|ref|XP_003604106.1| hypothetical protein MTR_3g118550 [Medicago truncatula]
gi|355493154|gb|AES74357.1| hypothetical protein MTR_3g118550 [Medicago truncatula]
Length = 196
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 73/132 (55%), Gaps = 25/132 (18%)
Query: 34 VIDGVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK 93
V DGVS S+FEA V+ K +A KGKN ++L S PFPSFQ GMTG +YIK V
Sbjct: 79 VSDGVSRSEFEAFVVSKKSFAACLKGKNTRIQLYSHPFPSFQLGMTGVLYIKDV------ 132
Query: 94 RSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLE 153
D D+WP K F++LDDGLE VR DPT V PI ELG D L E
Sbjct: 133 -----DEDKWP---CKLFIQLDDGLE-----------VRTCKDPTLVFPIFELGLDTLFE 173
Query: 154 PMTVDEFTDSLS 165
MT E +D S
Sbjct: 174 SMTPKEVSDDRS 185
>gi|429091312|ref|ZP_19153990.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 1210]
gi|426744139|emb|CCJ80103.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 1210]
Length = 269
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRW---PVSDEIHALSDKPVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSEAFNGAYLHQKCVKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A E L+ A IHP + A SLS+ C L + IK V E G +L+ +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSENECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 YFAKPYVHKKH-----RENKICRL 254
KP + RE + CR+
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCRV 246
>gi|408356303|ref|YP_006844834.1| formamidopyrimidine-DNA glycosylase/AP lyase [Amphibacillus xylanus
NBRC 15112]
gi|407727074|dbj|BAM47072.1| formamidopyrimidine-DNA glycosylase/AP lyase [Amphibacillus xylanus
NBRC 15112]
Length = 276
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE R+ + + + +++ S+ K+I D VS F+ ++G++I +R
Sbjct: 1 MPELPEVETVRQTLLK-LVKDEVITSVDVFWPKIIKKPDDVSI--FKQLLIGQSIKDINR 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
KGK L LD S M G I Y + A+KD K++ + G
Sbjct: 58 KGKFLIFELDHYSLVS-HLRMEGKYGI-------YPKEAIKD------KHTHVIFNFESG 103
Query: 118 LELSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F + L N + P++++GPD ++ + K IK +L
Sbjct: 104 RSLHYHDVRKFGTMHLFNKGEAHLELPLAKVGPDPFEPGYLFEDIYPKIKKSSRAIKNIL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL---GVSLQ 231
LDQ+ ISG+GN DE L++AKIHPL+ SLS+ +LK K+ +REA+ G +++
Sbjct: 164 LDQTIISGLGNIYVDETLFRAKIHPLRQGTSLSETEVQFILKEAKDTLREAVKQGGTTIR 223
Query: 232 FY 233
Y
Sbjct: 224 SY 225
>gi|386856104|ref|YP_006260281.1| Formamidopyrimidine-DNA glycosylase [Deinococcus gobiensis I-0]
gi|379999633|gb|AFD24823.1| Formamidopyrimidine-DNA glycosylase [Deinococcus gobiensis I-0]
Length = 274
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 116/245 (47%), Gaps = 44/245 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE G+ I+ ++ + + G A+ +G+ + R+GK
Sbjct: 1 MPELPEVETTRRKIEPLLRGQ-IITAVRHEPSHRYQGTQAA------VGRRVKGLTRRGK 53
Query: 61 NLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
L L+L +P GMTG ++ P K+++
Sbjct: 54 YLMLQLAAPGAAESEPHDLELIVHLGMTGGFRLE------------------PGKHTRVT 95
Query: 112 VELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+E G L F D RRF K+ ++ + +P +S +GP+ L E DEF + +
Sbjct: 96 LETGAGA-LHFDDPRRFGKMVVVRPGEYAGMPTLSGMGPEPLSEDFREDEFV-ARAATAG 153
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EA 225
+K LL Q +SG+GN ADE L+ A+IHP QTA L+ + + L + ++EV EA
Sbjct: 154 AVKPWLLSQKPVSGVGNIYADEALWHARIHPAQTA--LNADEASRLYRAVREVMAQAVEA 211
Query: 226 LGVSL 230
G SL
Sbjct: 212 GGSSL 216
>gi|333920820|ref|YP_004494401.1| fomramidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483041|gb|AEF41601.1| Formamidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus
DQS3-9A1]
Length = 292
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H + ++I +S+ + + +D + G+A A R+
Sbjct: 1 MPELPEVEVVRRGLESHALRQQI-ESVEVRHPRAVRRHAAGPADLAGRLAGRAFSGAFRR 59
Query: 59 GKNLWLRL-DSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
GK LWL L + P + GM+G + ++ D +++ V
Sbjct: 60 GKYLWLTLAEKNPDEAADSVLVHLGMSGQMLVQA-------------ADAPMEPHARIVV 106
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVP---------PISELGPDALLEPMTVDEFTDS 163
LD G L F D+R F + +VP PI + D L +
Sbjct: 107 TLDGGTHLRFVDQRTFGGWLVAPLVPAVPDSAGELLPQPIVHIARDPLDPLFDERAVIEV 166
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +K IK +LLDQS ISG+GN ADE L++A IH ++A SLS+ T+L +EV
Sbjct: 167 IRRKPSEIKRILLDQSVISGVGNIYADEALWRAGIHGNRSARSLSRAKIRTILFAAREV 225
>gi|227543197|ref|ZP_03973246.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181006|gb|EEI61978.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 273
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEA---SVLGKAILSAHR 57
MPELPEVE RR ++ +G + V V+ +A EA + G+ I R
Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSV------SVLHPRAARSTEALAPRLAGREICGTGR 54
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LWL LD M+G + I TQ R S +++ ELD G
Sbjct: 55 RGKFLWLVLDGAEALVIHLRMSGQMRI-----TQTARPV--------SPHTRIVAELD-G 100
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + F D+R F L +P ++ + PD L + + L + + +K LL
Sbjct: 101 LTVQFVDQRTFGSWSLSELVDGLPVTLAHIAPDLLDASLDIRGVAKHLKRGRGELKPALL 160
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+Q +SGIGN ADE+L++A++HP QT +S LL ++V R+AL
Sbjct: 161 NQGIVSGIGNIYADEMLWRARLHPRQTRSHVSPHRLTELLLAGQDVMRDAL 211
>gi|254852187|ref|ZP_05241535.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-503]
gi|254931504|ref|ZP_05264863.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
HPB2262]
gi|255520154|ref|ZP_05387391.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-175]
gi|300764770|ref|ZP_07074760.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N1-017]
gi|404281124|ref|YP_006682022.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2755]
gi|404286988|ref|YP_006693574.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|405749910|ref|YP_006673376.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes ATCC
19117]
gi|417317669|ref|ZP_12104281.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes J1-220]
gi|424823326|ref|ZP_18248339.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
Scott A]
gi|258605492|gb|EEW18100.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-503]
gi|293583056|gb|EFF95088.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
HPB2262]
gi|300514446|gb|EFK41503.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N1-017]
gi|328474917|gb|EGF45717.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes J1-220]
gi|332312006|gb|EGJ25101.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
Scott A]
gi|404219110|emb|CBY70474.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes ATCC
19117]
gi|404227759|emb|CBY49164.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2755]
gi|404245917|emb|CBY04142.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 273
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|363420256|ref|ZP_09308350.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus pyridinivorans AK37]
gi|359736052|gb|EHK85003.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus pyridinivorans AK37]
Length = 287
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 32/271 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +G + + V D V G+ + S R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVVGATVDSVQVLHPRAVRRHEPGPRDLALQVTGQKVASVERRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K +WL L+ GM+G + ++ V DE K+ + LD+G
Sbjct: 61 KYMWLVLEPADLALVVHLGMSGQMLVQPPTVP----------DE---KHLRIRAVLDNGA 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F L D +P P++ + D + D L K IK
Sbjct: 108 DLRFVDQRTFGGWALAPLVEVDGDRLPLPVAHIARDPMDPRFDPDAVVAVLRTKHTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG----- 227
LLDQ+ +SGIGN ADE L++A+IH + +LS+ + L EV EALG
Sbjct: 168 ALLDQTVVSGIGNIYADEALWRARIHGNRPTDALSRPKLRSALDAATEVMAEALGQGGTS 227
Query: 228 -----VSLQFYKCYFAKPYVHKKHRENKICR 253
V++ YF + ++ REN+ CR
Sbjct: 228 FDALYVNVNGESGYFER-SLNVYGRENEPCR 257
>gi|297622481|ref|YP_003703915.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM
17093]
gi|297163661|gb|ADI13372.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM
17093]
Length = 267
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 31/232 (13%)
Query: 11 RRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRLDSPP 70
RR +E + G+ I+ + + D G + E +V G+ IL+ R+GK L L L
Sbjct: 2 RRELEPYVRGRVILAATLVD---APPGPKYARLERAV-GQRILAVTRRGKFLILPLSGGD 57
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAK 130
GMTG + + E K+ + +EL +G L F D RRF
Sbjct: 58 DLIIHLGMTGIL-----------------SPEPAPKHVRVRLELSEGGALYFRDARRFG- 99
Query: 131 VRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGN 186
R L P+ ++P +S +GP+ L T D +L + + IK LL Q +SG+GN
Sbjct: 100 -RFLVVPSGAYEALPTLSAMGPEPLSAAFTGDALYRALQRSRTPIKPFLLSQKPVSGVGN 158
Query: 187 WVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYK 234
ADE L++A+IHPL A +S+ A L I+EV A G +LQ Y+
Sbjct: 159 IYADEALWRARIHPLTPANEVSRAKAAQLAGAIREVLAASLRAKGTTLQDYR 210
>gi|254824377|ref|ZP_05229378.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-194]
gi|405755723|ref|YP_006679187.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2540]
gi|293593612|gb|EFG01373.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-194]
gi|404224923|emb|CBY76285.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2540]
Length = 273
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|419964640|ref|ZP_14480594.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus opacus M213]
gi|414570035|gb|EKT80774.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus opacus M213]
Length = 292
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
IK LLDQ+ +SGIGN ADE L++A+IH + +S LL +EV REAL
Sbjct: 163 TEIKRALLDQTVVSGIGNIYADEALWRAQIHGNRLTDRVSGPKVRELLTAAQEVMREAL 221
>gi|259647148|sp|C0ZXQ5.1|FPG_RHOE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226185036|dbj|BAH33140.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus
erythropolis PR4]
Length = 289
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +G I + + + S D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L+ GM+G + ++ T +W K+ + + LD G
Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQ------------PPTVDW-EKHLRIRLALDSGA 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F + D T +P ++ + D + ++ L K IK
Sbjct: 108 DLRFVDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFY 233
+LDQ+ +SGIGN ADE L++AKIH + A SL++ LL V +G +L
Sbjct: 168 AILDQTVVSGIGNIYADESLWRAKIHGNRIAESLTRPKLRELLTAAHSV---MGEALDQG 224
Query: 234 KCYFAKPYVH 243
F YV+
Sbjct: 225 GTSFDALYVN 234
>gi|424851986|ref|ZP_18276383.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus PD630]
gi|356666651|gb|EHI46722.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus PD630]
Length = 292
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLTATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
IK LLDQ+ +SGIGN ADE L++A+IH + LS +L +EV REAL
Sbjct: 163 TEIKRALLDQTVVSGIGNIYADEALWRAQIHGNRLTDRLSGPKIREVLTAAQEVMREAL 221
>gi|392961135|ref|ZP_10326598.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans DSM
17108]
gi|421055125|ref|ZP_15518089.1| formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B4]
gi|421058993|ref|ZP_15521626.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B3]
gi|421067086|ref|ZP_15528601.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A12]
gi|421072005|ref|ZP_15533118.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A11]
gi|392440228|gb|EIW17916.1| formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B4]
gi|392446593|gb|EIW23878.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A11]
gi|392450874|gb|EIW27881.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A12]
gi|392454386|gb|EIW31223.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans DSM
17108]
gi|392459732|gb|EIW36115.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B3]
Length = 274
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS--IIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPE+PEVE RR++ E G+ IV+ ++A +++ S+++F+A + + I + R+
Sbjct: 1 MPEMPEVEIIRRSLIEKISGRTIVEVEFLLA---RLVKWPSSAEFQAVLTNRKIETVARR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LD MTG + QY R KD K+++ +LD+G
Sbjct: 58 GKYLLFHLDDKQVLVIHLRMTGRL--------QYITRDGEKD------KFTRILFKLDNG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R + L+ ++ + + +GP+ L ++ T+ L K IKA+L
Sbjct: 104 DILVYADTRTLGTLYLMPFDELWRIAGLFTMGPEPLTPEFSLIYLTEMLKKHHGKIKAIL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQ 231
L+Q YI G+GN DE + A IHP + A SLS+ L I +V E G + +
Sbjct: 164 LNQKYIGGLGNIYVDECMAIAGIHPERIASSLSENENEKLYHAINKVIADGIEHGGTTFR 223
Query: 232 FYKCYFAKPYVHKKH 246
Y+ K H+ H
Sbjct: 224 DYRDGDGKSGSHQYH 238
>gi|420338591|ref|ZP_14840145.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-315]
gi|391257906|gb|EIQ17014.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-315]
Length = 269
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP Q A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDQLASSLSLAECELLARVIKAV 205
>gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylase [Rhodococcus jostii RHA1]
gi|123045457|sp|Q0S2E0.1|FPG_RHOSR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|110823012|gb|ABG98296.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1]
Length = 292
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+K LLDQ+ +SGIGN ADE L++A+IH + LS +L +EV REAL
Sbjct: 163 TEVKRALLDQTVVSGIGNIYADEALWRARIHGNRLTDRLSGPKVREVLTAAQEVMREAL 221
>gi|309807139|ref|ZP_07701116.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners
LactinV 03V1-b]
gi|308166490|gb|EFO68692.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners
LactinV 03V1-b]
Length = 197
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEGKYHFL-------------DSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTA 204
S + G+GN DEVL+Q+KIHPL A
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIA 191
>gi|302539955|ref|ZP_07292297.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus
ATCC 53653]
gi|302457573|gb|EFL20666.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus
ATCC 53653]
Length = 262
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + G +I + +AD V+ GV+A + + G+ + R GK
Sbjct: 1 MPELPDVEGFRRTLASCAQGHRIERVEVAD-PAVLRGVTAQRLKRELEGRRFAAPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P FGMTG + + + P ++ + + LDDG +L
Sbjct: 60 WLIAPAGGPTL-ILHFGMTGGLV-------------CRSEGDPPERFGRVVLTLDDGHQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D+R+ + L V I E GPDAL + E L ++ +KA L DQS
Sbjct: 106 RYHDQRKLRGLWLATTDADVDRILGEQGPDAL--SLGRAELDSLLEGRRGRVKATLTDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN + DE+L++A++HP L + L ++ V
Sbjct: 164 VVAGLGNLLGDEILWRARVHPKSRTSDLGPDELRRLHTALRGV 206
>gi|344198757|ref|YP_004783083.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrivorans
SS3]
gi|343774201|gb|AEM46757.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrivorans
SS3]
Length = 270
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H +G+++ +++ D + V+A D V G+ +LS R+GK
Sbjct: 1 MPELPEVEVTRLGIAPHLLGQRLEGAVVRDGRLRLP-VNA-DLAGRVAGQRLLSLRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+ GM+G + + + K V + D L L
Sbjct: 59 YLLLDLEQGTI-LIHLGMSGHLRVLPQSTPVQKHDHVD-------------LLFADDLCL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D RRF V L DP P + LGP+ L + T + +++ IK+ L+D
Sbjct: 105 RFHDPRRFGAVCWLADPDQHPFLRHLGPEPLGDDFTAEYLYQRSRSRQVPIKSFLMDAHI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+ G+GN A+E L+ A I P + A ++ + L++ ++++ EA
Sbjct: 165 VVGVGNIYANESLFAAGIDPRRHAGMIALQRYGKLVQTVRDILEA 209
>gi|419782746|ref|ZP_14308544.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK610]
gi|383182959|gb|EIC75507.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK610]
Length = 274
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IGKKI SI K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGKKI-SSIEIRYPKMIK-TDVDEFRKEVPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+E +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIEFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q+ ++G+GN DEVL++A++HP + + +L+ E + + + + + E G +++ Y
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 234 KCYFAK 239
F +
Sbjct: 224 TNAFGE 229
>gi|163942319|ref|YP_001647203.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis
KBAB4]
gi|163864516|gb|ABY45575.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis
KBAB4]
Length = 276
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I +I V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPQIVKRPDDAEIFKEMLRGETIENIKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL+KE + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREAASLTKEEVERIYEAI 207
>gi|387891149|ref|YP_006321447.1| formamidopyrimidine DNA glycosylase [Escherichia blattae DSM 4481]
gi|414594504|ref|ZP_11444140.1| formamidopyrimidine-DNA glycosylase [Escherichia blattae NBRC
105725]
gi|386925982|gb|AFJ48936.1| formamidopyrimidine DNA glycosylase [Escherichia blattae DSM 4481]
gi|403194499|dbj|GAB81792.1| formamidopyrimidine-DNA glycosylase [Escherichia blattae NBRC
105725]
Length = 269
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G+ I+ I + ++ VS + + S K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILH-IEIRNGRLRWPVSEALYALS--DKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A K V + L +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSVRILPDAPAAGKHDHVD-------------LVLSNGTVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P ++ LGP+ L E T S ++KKI +K L+D
Sbjct: 104 RYTDPRRFGAWLWARSLENHPVLAHLGPEPLSEDFTGAYLHASGARKKIAVKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRAAQSLSVAECERLAQEIKTV 205
>gi|121999089|ref|YP_001003876.1| formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1]
gi|166215627|sp|A1WZG2.1|FPG_HALHL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|121590494|gb|ABM63074.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Halorhodospira halophila SL1]
Length = 270
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ H +G+ + + ++ + + + EA+V+G+ +++ R+ K
Sbjct: 1 MPELPEVETTRRGLQVHLVGRTLQRVVV--RQRQLRYPVPARVEAAVVGEEVVALERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + GM+G++ + V +TD P ++ + L+DG +
Sbjct: 59 YLLIRLGGGAWLLLHLGMSGSLRL------------VAETDA-PGRHDHVDLVLNDGRAV 105
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
TD RRF + L + DP + LGP+ L + +++ +KALL+D +
Sbjct: 106 RLTDPRRFGCLLLGDGDPQDHRLLRRLGPEPLGSAFDGAVLHRAARGRRVAVKALLMDAT 165
Query: 180 YISGIGNWVADEVLYQAKIHP 200
+ G+GN A+E L++A I P
Sbjct: 166 VVVGVGNIYANEALFRAGIRP 186
>gi|406696355|gb|EKC99646.1| hypothetical protein A1Q2_06065 [Trichosporon asahii var. asahii
CBS 8904]
Length = 376
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 5 PEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDF-----EASVLGKAILSAHRKG 59
PEVE ARR I E C G I K+ +D V DG S +F E+S L A+ K
Sbjct: 19 PEVERARRLIAETCTGYTIGKAETYEDTIVYDGASHDEFDVNARESSSSHTFNLEANFKI 78
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-----SAVKDTDEWPSKYSKFFVEL 114
+ R P + + G T Y+R V WP K + V
Sbjct: 79 LDYSFRRRQIP----SYALRHDRNDPGQEPTWYRRKVNLGEGVDGALLWPPKLTPPDV-A 133
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+ EL+F D RR ++RL+ DP S PP+S LG D +L ++DEF L K+ T+K
Sbjct: 134 GEARELAFLDPRRLGRLRLVPDPVLSHPPLSLLGFDPVLSHPSLDEFKGLLENKRGTVKG 193
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L++DQ++ +G+GNWVADE HP+Q L + L + +++V
Sbjct: 194 LIMDQAFSAGVGNWVADEC------HPIQ---DLEEAQVVELHRLLRDV 233
>gi|373252028|ref|ZP_09540146.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nesterenkonia sp. F]
Length = 323
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 70/294 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G++ + + D + DG F + G+ +A R+
Sbjct: 1 MPELPEVEVVRRGVERWAVGRRADRPDVHDARSLRRHDG-GVEHFADRLTGRTFGAARRR 59
Query: 59 GKNLWLRL----------DSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
GK LW+ L D F GM+G + V+ D P
Sbjct: 60 GKYLWIPLHAAGSSAATADGSEFGEALVIHLGMSGQVL-------------VQPDDAPPE 106
Query: 106 KYSKFFVELDD--------------------GLELSFTDKRRFAKVRL-----LNDPTSV 140
K+ K V+L D G +L F D+R F +++ + P+
Sbjct: 107 KHLKVSVDLRDAPEAASEGAPADDVGPAARTGRQLRFVDQRIFGGLQIRSLVPADHPSGT 166
Query: 141 PP--ISELGPDALLEPM--TVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQA 196
P I+ +GPD L EP V+ F +L +++ +K LLDQ+ SGIGN ADE L++A
Sbjct: 167 VPESIAHIGPDPL-EPAGAAVEPFFRALRRRRSGLKRALLDQTLRSGIGNIYADEALWRA 225
Query: 197 KIHPLQTAVSLSKESCATLLKCIKEVRE-----------ALGVSLQFYKCYFAK 239
++H + ++++ A LL ++EV E AL V++ YFA+
Sbjct: 226 RLHFARRTETVTRAEAARLLGAVREVMEAALDAGGTSFDALYVNVNGESGYFAR 279
>gi|296130132|ref|YP_003637382.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM
20109]
gi|296021947|gb|ADG75183.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM
20109]
Length = 324
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-------DFEASVLGKAIL 53
MPELPEVE R + H +G+ + D V G S DF A ++G+ +
Sbjct: 1 MPELPEVETVRDGLARHVLGRTVT------DVDVRRGYSVRRHDAGPLDFAARLVGRRLE 54
Query: 54 SAHRKGKNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
+A R+GK LWL LD GM+G + ++G A +A+ D P S
Sbjct: 55 AAVRRGKFLWLLLDEGAGRGDDALMAHLGMSGQLLVRGPAAGP---AALDDAPGDPVATS 111
Query: 109 -----------KFFVELDDGLELSFTDKRRFAKVR---LLNDPTSVP------------P 142
+ + LDDG L F D+R F + L+ P P P
Sbjct: 112 GPTGWVEHPHLRVRLRLDDGSALDFVDQRTFGHLSVPDLVPTPDGAPGGLGSARPAVPAP 171
Query: 143 ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQ 202
++ + D L + D +L ++ +K LLDQ+ +SG+GN ADE L++A++H +
Sbjct: 172 VAHIARDLLDPALDRDAVVAALRARRTEVKRALLDQTLVSGVGNIYADEALWRARLHGTR 231
Query: 203 TAVSLSKESCATLLKCIKEV-REALGVSLQFYKCYF 237
+L +L EV EALG + +
Sbjct: 232 PTAALRPVEARRVLDAAHEVMTEALGQGGTSFDALY 267
>gi|429203997|ref|ZP_19195294.1| putative DNA-formamidopyrimidine glycosylase [Streptomyces ipomoeae
91-03]
gi|428660487|gb|EKX60046.1| putative DNA-formamidopyrimidine glycosylase [Streptomyces ipomoeae
91-03]
Length = 259
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE R + C V + D V+ GV+A+ + G+ + A R GK
Sbjct: 1 MPELPDVEGFREVLMT-CGRHPCVTDVQVRDAGVLWGVTANRLRGELRGRRLGKAWRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L++ D P ++ FGM+G++ D+ + + LDD L
Sbjct: 60 WLFVPTDDGPVLAWHFGMSGSLLCCS-------------PDDPVEAHDRVVFTLDDSRSL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
D+R+ +RL T+V I +ELGPDAL + DEF + LS ++ +K L+DQS
Sbjct: 107 RCRDQRKLQGLRLAER-TAVDRIEAELGPDALA--IERDEFLELLSGRRGAVKGALMDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKES 211
I+G+GN + DE+L++A++HP A LS ++
Sbjct: 164 VIAGLGNLLCDEILWRARVHPRTPARDLSDKT 195
>gi|395771773|ref|ZP_10452288.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces acidiscabies 84-104]
Length = 286
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVADAEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + V+ D K+ + V D +
Sbjct: 61 KYLWLPLDDGGQAILAHLGMSGQLL-------------VQPPDAADEKHLRIRVRFADDV 107
Query: 119 E--LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
+ L F D+R F + L + P I + D L +P+ DE F ++L +K+ T+K
Sbjct: 108 QTQLRFVDQRTFGGLSLHDTTDDGLPDVIGHIARDPL-DPLFDDEAFHEALRRKRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L+++++H + ++ A LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRLHYDRPVTGFTRPRTAELLGHVRDVMNA 218
>gi|146278626|ref|YP_001168785.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC
17025]
gi|166198740|sp|A4WVR6.1|FPG_RHOS5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145556867|gb|ABP71480.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rhodobacter sphaeroides ATCC 17025]
Length = 283
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 17/242 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I ++ + + + + G+ +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARV--NRPDLRWPLPPRMAERLTGQRVLRLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L GM+G + + G V + V D P+++ +E++ G +
Sbjct: 59 YILADLSGGESLLIHLGMSGRMLVSGARVGDF----VHD-HPAPARHDHVVLEMEGGARV 113
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+F D RRF + L+ PT P ++ LGP+ L L+ ++ +KA LL
Sbjct: 114 TFNDARRFGAMDLV--PTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALL 171
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQF 232
DQ ++G+GN EVL++A + P++ A SL + A L+ I+EV EA G SL+
Sbjct: 172 DQRIVAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAAGLVPIIREVLSEAIEAGGSSLRD 231
Query: 233 YK 234
Y+
Sbjct: 232 YR 233
>gi|449018399|dbj|BAM81801.1| similar to formamidopyrimidine-DNA glycosylase [Cyanidioschyzon
merolae strain 10D]
Length = 260
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 107/259 (41%), Gaps = 40/259 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK----VIDGVSASDFEASVLGKAILSAH 56
MPELP VE ARR I+ C + + A D K +D + +L + + H
Sbjct: 1 MPELPAVERARRMIDALCKSYRRINVQSAPDPKHASEFVDKLFEGRLGLDLLERRVCVGH 60
Query: 57 ------RKGKNLWLRLDSPPFPSFQFGMTGAIYIKG-------------VAVTQYKRSAV 97
R GKNLW D PP +F M G+ ++G A ++ S
Sbjct: 61 VLRQLGRHGKNLWFEFDEPPHVFVRFRMAGSFVVRGHEDGYVYETFRRRTAACRFHDSGT 120
Query: 98 KDTDEWPSKYSKF---FVELDDGL-----------ELSFTDKRRFAKVRLLNDPTSVPPI 143
WP K++ F G+ E + D R+ ++RL + I
Sbjct: 121 PLVSVWPPKHTHIVFSFAPCSPGVDSASINGISVREFALVDPRKVTRMRLSDSSCPSVEI 180
Query: 144 SEL--GPDALLEPMTVDEFTDS-LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHP 200
L G DAL ++ F L K IK+LLL Q +I+G+ NW+ DEVLY A IHP
Sbjct: 181 RSLIGGFDALHALPPIERFERKMLVYPKANIKSLLLGQRFIAGLDNWMVDEVLYYAHIHP 240
Query: 201 LQTAVSLSKESCATLLKCI 219
L++ A L + I
Sbjct: 241 ESRTCDLTRIDVAALHQSI 259
>gi|386585719|ref|YP_006082121.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D12]
gi|353737865|gb|AER18873.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D12]
Length = 275
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + + GV A F +++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVIERVKVTYAPMIKTGVDA--FCQNLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWP-SKYSKFFVELDD 116
L IY+ + + R K D+ P +K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFTD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++ F L+K K IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVEAYFLSRKIGPEPTEEDFDLEAFAAKLAKSKKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSL 230
LLDQS ++G+GN DEVL++A++HP Q + LS E A L + EV E G ++
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAQVHPAQASNQLSAEQVADLRQATIEVLQLGIEKGGSTI 220
Query: 231 QFYK 234
+ YK
Sbjct: 221 RTYK 224
>gi|255658137|ref|ZP_05403546.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM
20544]
gi|260849444|gb|EEX69451.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM
20544]
Length = 274
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 17/252 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++E G+ I + I + + F++ V GK + R+GK
Sbjct: 1 MPELPEVEIIRQYLDEQLPGRTIACADILL-TRQLKYPEPEAFQSLVAGKRMKGMRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L F MTG++ + Y++ L G L
Sbjct: 60 YLLLDLQDGSTIVFHLRMTGSL-------------VYDPSGNQRDAYARMVFHLAGGGAL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R F V + +V + LGP+ L E T ++ +K IK+ LLDQ
Sbjct: 107 VFADVRTFGCVYGFAAGEEIAVSGLQSLGPEPLSEAFTPAYLAQAIRGRKQPIKSFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCYF 237
I+G+GN ADE L+ A IHP + A SL++ C L I+ V R+ L ++ Y
Sbjct: 167 RRIAGLGNIYADESLFLAGIHPRREAGSLTQAECKKLAAAIQHVLRDGLADGGTTFRNYR 226
Query: 238 AKPYVHKKHREN 249
+ +H+E+
Sbjct: 227 NGEGGYGRHQEH 238
>gi|115252785|emb|CAK98221.1| probable formamidopyrimidine-dna glycosylase protein [Spiroplasma
citri]
Length = 277
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 15/224 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H +GK I I + + + + +F ++ + I R GK
Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L LD S M G Y ++ + EW ++ ELD +L
Sbjct: 61 HLLFILDDYVLIS-HLRMEGKYYF----------TSKDEPGEW--QHIMVLFELDHQFQL 107
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ND P+++LG + E +TV +S K IK LL+Q
Sbjct: 108 RYHDTRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ I GIGN A+E+L+ +KIHP + +L + +++ K V
Sbjct: 168 NVIVGIGNIYANEILFASKIHPGEITKNLVDQDYQNIIENTKLV 211
>gi|170766560|ref|ZP_02901013.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627]
gi|170123998|gb|EDS92929.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627]
Length = 269
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + +S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRSS--NQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRIL-------------PEERPPEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTRALEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L++ IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLVRMIKTV 205
>gi|323359693|ref|YP_004226089.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
StLB037]
gi|323276064|dbj|BAJ76209.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
StLB037]
Length = 296
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E G I + D+ + A+ FEA + G+ I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW+ + + GM+G + ++ + + ++ E P + L
Sbjct: 61 KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPEERHERIRIELEHP---------VHGPLS 111
Query: 120 LSFTDKRRFAKV---RLLNDP--------TSVP----PISELGPDALLEPMTVDEFTDSL 164
+ F D+R F + RL++ P +S+P ++ + D L V F +
Sbjct: 112 VVFADQRTFGSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRV 171
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+ IK +LLDQ+ SGIGN ADE L+ A+IHP A SL + LL EVRE
Sbjct: 172 GRTASGIKRVLLDQTVASGIGNIYADESLWAARIHPEAVASSLPTRAVNRLL---GEVRE 228
Query: 225 ALGVSLQFYKCYFAKPYVH 243
L +L F YV+
Sbjct: 229 VLDKALAEGGTSFDAQYVN 247
>gi|421488723|ref|ZP_15936111.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK304]
gi|400367940|gb|EJP20955.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK304]
Length = 274
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 26/247 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K++ +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMVK-TDLDEFQKEVPGQVVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHIFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI---SELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + LL P + +LGP+ + + + F +LSK K IK+ LL
Sbjct: 104 LVYEDVRKFGTIELLT-PNLLEAYFVSKKLGPEPIEQDFDLQSFQAALSKSKKPIKSHLL 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQF 232
DQ+ ++G+GN DEVL++A++HP +++ +L+ + + + + + + E G +++
Sbjct: 163 DQTLVAGLGNIYVDEVLWRAQVHPARSSQTLTADETSAIHNQTIAVLGQAVEKGGSTIRT 222
Query: 233 YKCYFAK 239
Y F +
Sbjct: 223 YTNAFGE 229
>gi|389819855|ref|ZP_10209523.1| formamidopyrimidine-DNA glycosylase [Planococcus antarcticus DSM
14505]
gi|388463115|gb|EIM05487.1| formamidopyrimidine-DNA glycosylase [Planococcus antarcticus DSM
14505]
Length = 289
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 35/256 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---------IDGVSASDFEASVLGKA 51
MPELPEVE R I +GKKI ++D +V I + A F S++G
Sbjct: 1 MPELPEVEGVVRQIRPVSVGKKIEAVAVSDTIRVSKTNGKEAIIKRMEADRFIESLVGAQ 60
Query: 52 ILSAHRKGKNLW--LRLDSPPFPSFQFGMTGAIY----IKGVAVTQYKRSAVKDTDEWPS 105
I+ R+ K ++ LR D+ GM+GA + ++ + +++R
Sbjct: 61 IIRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYIDQLQSIPEDKFRR----------- 109
Query: 106 KYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEF---TD 162
+ + L DG L+F+D RRF ++R+L + PP+ + P+ E + ++ F +
Sbjct: 110 -HVHVVLTLSDGKLLAFSDIRRFGEMRVLQEEADFPPLLLMAPEPF-EAVALEHFLLRAE 167
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK----ESCATLLKC 218
S K IK +++D ISG GN A E L++ KIHP ++A +SK E T++
Sbjct: 168 SSKYKNKAIKEVIMDGQVISGCGNIYATEALFKMKIHPKRSASRISKKRKVELFETVVAI 227
Query: 219 IKEVREALGVSLQFYK 234
+ E EA G ++ Y+
Sbjct: 228 LLESIEAGGSTISDYR 243
>gi|157693308|ref|YP_001487770.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus SAFR-032]
gi|157682066|gb|ABV63210.1| DNA-formamidopyrimidine glycosylase [Bacillus pumilus SAFR-032]
Length = 276
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V + E K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYRVHEAHEPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + E T + + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ G+GN DEVL+++ IHP A LS ESC L K I
Sbjct: 167 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLESCKVLHKQI 207
>gi|450105324|ref|ZP_21859836.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF14]
gi|450175191|ref|ZP_21885019.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM1]
gi|449224925|gb|EMC24549.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF14]
gi|449247264|gb|EMC45549.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM1]
Length = 273
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK++P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVNPERLARQLKK 195
>gi|386382906|ref|ZP_10068466.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces tsukubaensis NRRL18488]
gi|385669632|gb|EIF92815.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces tsukubaensis NRRL18488]
Length = 284
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ I ++ + V + DF A + G+++ A R+G
Sbjct: 1 MPELPEVEVVRRGLLRWVTGRTIAEAQVLHPRAVRRHPAGPVDFTAQLTGQSLGLACRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LW F G TG+ + + ++ + T + ++ + + DD G
Sbjct: 61 KYLW----------FSLGRTGSSLLGHLGMSGQLLVQPEGTPD--ERHLRIRIRFDDSIG 108
Query: 118 LELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL F D+R F + + N P +P I+ + D L F ++L ++ T+K L
Sbjct: 109 TELRFVDQRTFGGLSVHENTPDGLPDAIAHIARDPLDPAFDDPAFLNALKLRRTTVKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LDQS ISG+GN ADE L++ ++H + +L++ LL +++V A
Sbjct: 169 LDQSLISGVGNIYADEALWRTRLHYDRPTTALTRPRATELLGHVRDVMTA 218
>gi|429211398|ref|ZP_19202564.1| formamidopyrimidine-DNA glycosylase [Pseudomonas sp. M1]
gi|428158812|gb|EKX05359.1| formamidopyrimidine-DNA glycosylase [Pseudomonas sp. M1]
Length = 270
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + G+++ + +I D + + D + + G+ IL R+ K
Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVVIRD--RRLRWPVPEDLDVRLSGQRILQVTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L ++ S GM+G++ + + P+K+ +EL+ GL L
Sbjct: 59 YLLLEAEAGTLIS-HLGMSGSLRLVECGLA-------------PAKHEHVDIELESGLAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P + LGP+ L + + + + +K ++D +
Sbjct: 105 RYTDPRRFGALLWSQAPLEHELLRHLGPEPLTDAFEGERLYQLSRGRSMAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
+ G+GN A+E L+ A I P + A S+S+ A LK +E++ L ++++
Sbjct: 165 VVGVGNIYANEALFAAGIDPRREAGSISR---ARYLKLAEEIKRILAIAIE 212
>gi|229135421|ref|ZP_04264208.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196]
gi|228647982|gb|EEL04030.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196]
Length = 276
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I +I V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL+KE + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREAASLTKEEVERIYEAI 207
>gi|194017136|ref|ZP_03055748.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061]
gi|194011004|gb|EDW20574.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061]
Length = 277
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRLVGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V + E K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYRVHEAHEPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + E T + + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFQPGEEERELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ G+GN DEVL+++ IHP A LS ESC L K I
Sbjct: 167 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLESCKVLHKQI 207
>gi|90023321|ref|YP_529148.1| formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40]
gi|123395478|sp|Q21EE3.1|FPG_SACD2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|89952921|gb|ABD82936.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Saccharophagus degradans 2-40]
Length = 271
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H GK++ ++ N+ + +D + K + + HR+GK
Sbjct: 1 MPELPEVETTRRGILPHLEGKRV--KAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + GM+G++ I +K DE P + + L L
Sbjct: 59 YLLLEFANGHV-IWHLGMSGSLRI------------IK-ADEPPMVHDHVDIAFGGNLAL 104
Query: 121 SFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+TD RRF V N+ ++ LGP+ L + D K+ ++K ++D
Sbjct: 105 RYTDPRRFGAVLWTNEAILEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSK 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ + IHPL+ A LS++ C IK V
Sbjct: 165 VVVGVGNIYANEALFNSAIHPLKAAGKLSQKQCDIFCSEIKSV 207
>gi|336114637|ref|YP_004569404.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 2-6]
gi|335368067|gb|AEH54018.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 2-6]
Length = 277
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ I + V ++ F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLNTEAFADALAGETIRSLGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D + + + ++G R V +E K++ G EL
Sbjct: 61 FLIFYTD-------HYALVSHLRMEG-------RYRVYGQNEPVEKHTHMIFHFQSGKEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ L + T L K + +K+ LLDQ
Sbjct: 107 RYKDVRKFGTMHLFLKGEELSSLPLSKLGPEPLSDAFTEKYLYGKLKKTERNVKSCLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSLQFY 233
+ ISG+GN DE L++A+I P + A SL+K+ + +++ ++E E G +++ Y
Sbjct: 167 TVISGLGNIYVDEALFRARIFPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSY 225
>gi|299822774|ref|ZP_07054660.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
gi|299816303|gb|EFI83541.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
Length = 273
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E IGK I +I K+I G+ A +F ++G+ I + R+GK
Sbjct: 1 MPELPEVENVRTTLERQVIGKTI-DQVIVHVPKMIHGLPADEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S M G + Y + E +K++ D EL
Sbjct: 60 FLLFDLTDCTILS-HLRMEGKFRV-------YPET------EPTTKHTHIIFHFTDQTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +++ + + + +LGP+ L + F L K +K LLDQ
Sbjct: 106 RFLDVRKFGTMQVAAKHQEETTNSLQKLGPEPLSAHFELAAFASKLKKTTRAVKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQFYK 234
++G+GN ADE+ ++A++ P++ LS A L + K++ EA G S++ Y+
Sbjct: 166 KLVAGVGNIYADEICFEAEVLPMRGGNELSDAEVAALYEATKKIIGIAVEAGGSSIRTYE 225
>gi|297565906|ref|YP_003684878.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946]
gi|296850355|gb|ADH63370.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946]
Length = 274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 28/224 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E + +G+ I K +D + A G+ +L R+GK
Sbjct: 1 MPELPEVETTRRILEPYLLGQTIQKLSHSDPTRYRHTELAH-------GRKVLGTTRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +L+ GMTG P +++ VEL G L
Sbjct: 54 YMLWQLEGGLEAIIHLGMTGGFRFT------------------PHTHTRLTVELP-GRTL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD RRF K ++ + + + +GP+ L + T+ +F L+ + IK +LL Q
Sbjct: 95 YYTDPRRFGKWWVVEAGNYREIDLLGRIGPEPLSQEFTLPQFQRVLAGTRRRIKEVLLGQ 154
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGN ADE L+Q++IHP + A +L L K I++V
Sbjct: 155 EAVAGIGNIYADESLWQSRIHPERPANTLKPAEVKRLYKAIRDV 198
>gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum
JL354]
Length = 260
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R +E C+ + I + DD I+ + + ++G HR GK
Sbjct: 1 MPELPEAEANRLRVERDCLHRTIEAAEPGDDTSYIE-LPGDNERGRLVGHQFTRTHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ +S P+ GM+G++ D + P Y+KF + + L
Sbjct: 60 LIFAGSESGPWICVHLGMSGSLR-------------PFDEADGPPDYAKFLIRFEGERRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++ P + GPDAL + D F + + + IK+ L++Q
Sbjct: 107 AFRCPRKLGWVRVVDSPEAEIERIGFGPDAL--EIGRDAFAEVIGDSRGAIKSALIEQKK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL 226
++G+GN +DE+LY+ I P + LS + ++++ A+
Sbjct: 165 LAGVGNLWSDEILYRTAIDPQRKGTDLSDSQLGDIYDAMRDILHAV 210
>gi|315656592|ref|ZP_07909479.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492547|gb|EFU82151.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 321
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--SDFEASVLGKAILSAHRK 58
MPELPEVE RR +E+ +G +++ + + + A ++G + +A R+
Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60
Query: 59 GKNLWLRL--DSP----PFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK----- 106
GK LW L D+P P GM+G + ++ T +++ A P
Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQGAPQHSRETR 120
Query: 107 ---YSKFFVELDDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEF-- 160
+ + LD+ +L F D+R F V L PT+ +G L P V+
Sbjct: 121 LLPHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEHIAR 180
Query: 161 ---------TDSLSKKKITIKAL---LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
TD + K + +A+ LLDQS +SGIGN ADE L+ A+IHP SLS
Sbjct: 181 DVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGRSLS 240
Query: 209 KESCATLLKCIKEVREALGVSLQFYKCYFAKPYVH 243
LL + V E +L F F + YV+
Sbjct: 241 DRKLRKLLGAVAAVMEQ---ALVFGGTSFDRLYVN 272
>gi|424714439|ref|YP_007015154.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. LL195]
gi|424013623|emb|CCO64163.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. LL195]
Length = 287
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 15 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 73
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 74 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 119
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 120 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 179
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 180 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 238
>gi|315282487|ref|ZP_07870891.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120]
gi|313613871|gb|EFR87611.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120]
Length = 273
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + + I +LGP+ L E T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTSKYGEAETRSIKKLGPEPLTEAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ + AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFAAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|423519267|ref|ZP_17495748.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus HuA2-4]
gi|401159624|gb|EJQ67007.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus HuA2-4]
Length = 276
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I +I V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL+KE + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREAASLTKEEIERIYEAI 207
>gi|424780998|ref|ZP_18207864.1| Formamidopyrimidine-DNA glycosylase [Catellicoccus marimammalium
M35/04/3]
gi|422842418|gb|EKU26870.1| Formamidopyrimidine-DNA glycosylase [Catellicoccus marimammalium
M35/04/3]
Length = 272
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +++K +I +I+G DF ++GK I R GK
Sbjct: 1 MPELPEVETVCRGLRP-LVQNRMIKEVIITRPSIIEG-KEEDFRQIMVGKTIKGIARHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ S M G + V DE K++ LD+G EL
Sbjct: 59 YIIFILNEGYLLS-HLRMEG-------------KYRVTKKDEPLEKHTHVRFLLDNGEEL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R F K+ L N + +S +G + +EF L K + IK++LL+Q
Sbjct: 105 RYQDVRAFGKMCYLPNKEALITALSHVGKEPW--DKNEEEFYQELKKYRSAIKSVLLNQK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
ISG+GN DEVL++A++HP A ++KE A++LK +E+ EA G ++ YK
Sbjct: 163 VISGLGNIYVDEVLFKAQVHPETKANEITKEESASILKASQEILQAAIEAGGSTIHTYKN 222
Query: 236 YFAKPYVHKKH 246
K ++K
Sbjct: 223 AEGKSGAYQKQ 233
>gi|71893928|ref|YP_279374.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae J]
gi|71852055|gb|AAZ44663.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae J]
Length = 275
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 19/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVVTVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFAK--VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
ISG+GN ADEV + KI P +TA +S++ ++ K++
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKTAKLISRKEAELIIYFSKKI 207
>gi|397736919|ref|ZP_10503595.1| formamidopyrimidine-DNA glycosylase [Rhodococcus sp. JVH1]
gi|396927203|gb|EJI94436.1| formamidopyrimidine-DNA glycosylase [Rhodococcus sp. JVH1]
Length = 292
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 113/239 (47%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRF---AKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F A L++ S+ P ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVDVDGSLIPDSVAHIARDPLDPRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+K LLDQ+ +SGIGN ADE L++A+IH + LS +L +EV REAL
Sbjct: 163 TEVKRALLDQTVVSGIGNIYADEALWRARIHGNRLTDRLSGPKVREVLTAAQEVMREAL 221
>gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis
SK121]
gi|453068806|ref|ZP_21972077.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus qingshengii BKS 20-40]
gi|229321700|gb|EEN87497.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis
SK121]
gi|452764989|gb|EME23254.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus qingshengii BKS 20-40]
Length = 289
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +G I + + + S D + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L+ GM+G + ++ T +W K+ + + LD G
Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQ------------PPTVDW-EKHLRIRLALDSGA 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F + D T +P ++ + D + ++ L K IK
Sbjct: 108 DLRFVDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFY 233
+LDQ+ +SGIGN ADE L++AKIH + A +L++ LL V +G +L
Sbjct: 168 AILDQTVVSGIGNIYADESLWRAKIHGNRIAETLTRPKLRELLTAAHSV---MGEALDQG 224
Query: 234 KCYFAKPYVH 243
F YV+
Sbjct: 225 GTSFDALYVN 234
>gi|406900810|gb|EKD43659.1| hypothetical protein ACD_72C00187G0001 [uncultured bacterium]
Length = 289
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ G KI K I K + SA DF ++ R+GK
Sbjct: 1 MPELPEVETIRRDLEKKIAGTKI-KGIEILATKSVHNKSA-DFLKVLVNNNFKHIERRGK 58
Query: 61 NLWLRLDSPPFPSF---QFGMTGAI---YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L LD ++ MTG + + K + + ++A+ DT + P+K+++
Sbjct: 59 LLMFALDKVNKYAYLLVHLKMTGQLIYRHKKQLLAGGHSQTAM-DT-QAPNKFTRVVFTF 116
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L F D RRF ++L++ + + G + L ++ F K++ +KA
Sbjct: 117 SDGGQLFFNDLRRFGYLKLVSKEEKEKIVKNNFGIEPLTPDYILESFEKLFKKRQTNVKA 176
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+L+Q ISGIGN ADE + A I P++ +L+++ L +CI+ V
Sbjct: 177 LILNQKLISGIGNIYADEACFCAGILPMRKVSALTQKEIKKLFECIEHV 225
>gi|194466652|ref|ZP_03072639.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23]
gi|194453688|gb|EDX42585.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23]
Length = 276
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +KI + + + V DF +++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVE--DFRQALIGQTIENVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L R + M G Y + + P K++ E DG E
Sbjct: 59 YLLFRFTNDLTMISHLRMEGKYYNQPIG--------------GPIDKHTHVVFEFTDGTE 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L+ D +V + +GP+ + T+ FT L K + IK LL+
Sbjct: 105 LCYQDTRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLN 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL 226
Q +++G+GN DEVL+ I+P Q A +L+ A L + IKE+ A+
Sbjct: 165 QRHVAGLGNIYVDEVLWMTGINPEQPANTLTANQIAELRENIIKELATAI 214
>gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae TN]
gi|221230353|ref|YP_002503769.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923]
gi|7531120|sp|O69470.3|FPG_MYCLE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789446|sp|B8ZRZ2.1|FPG_MYCLB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|3150225|emb|CAA19197.1| formamidopyrimidine-dna glycosylase [Mycobacterium leprae]
gi|13093429|emb|CAC30611.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae]
gi|219933460|emb|CAR71753.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923]
Length = 282
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++++ +GK I + V V+ +D +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDYIVGKTITAVRVHHPRAVRRHVAGPTDLTNRLLGTRINGIDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LD+ GM+G + + V + R S F DDG
Sbjct: 61 KYLWFLLDTDIALVVHLGMSGQMLLGTVPRVDHVR------------ISALF---DDGTV 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L+FTD+R L + D + +P P++ L D V+ L K +K
Sbjct: 106 LNFTDQRTLGGWLLADLMTVDGSVLPVPVAHLARDPFDPRFDVEAVVKVLRCKHSELKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKES 211
LLDQ +SGIGN ADE L++A++H + A +L++
Sbjct: 166 LLDQQTVSGIGNIYADEALWRAEVHGARIAATLTRRQ 202
>gi|375094028|ref|ZP_09740293.1| formamidopyrimidine-DNA glycosylase Fpg [Saccharomonospora marina
XMU15]
gi|374654761|gb|EHR49594.1| formamidopyrimidine-DNA glycosylase Fpg [Saccharomonospora marina
XMU15]
Length = 287
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + V V A+DF A ++G + +A R+G
Sbjct: 1 MPELPEVEVVRAGLERHACGRVISAVDVLHPRAVRRHVPGAADFAARLVGVKLTAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LD GM+G + ++ T + P +F D G E
Sbjct: 61 KYLWFDLDDGAALLAHLGMSGQLLVQ-----------PGGTADEPHLRVRFRFA-DGGPE 108
Query: 120 LSFTDKRRFAKVRLLN--------DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
L F D+R F + L + P ++ I+ D L + TV + SL + +
Sbjct: 109 LRFVDQRTFGGLSLSDLTEVGGTPVPETIAHIARDPMDPLFDRATV---SRSLRSRHTEL 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV
Sbjct: 166 KRALLDQTLVSGIGNIYADEALWRSKLHWARPTDRLTARQAETVLAAAAEV 216
>gi|333024193|ref|ZP_08452257.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp.
Tu6071]
gi|332744045|gb|EGJ74486.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp.
Tu6071]
Length = 284
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V ++ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHLAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL LD GM+G + ++ A + V+ + +D
Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAERHLRVR-------------IGFEDAL 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L P I+ + D L +P+ D F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + L++ LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTAGLTRPRTDELLGHVRDVMNA 218
>gi|257875614|ref|ZP_05655267.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC20]
gi|257809780|gb|EEV38600.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC20]
Length = 280
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEYFESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QAKIHP Q A SL+ L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAKIHPEQPADSLTPAEANVLHQAIIDVLERAVEAGGTTIRTY 224
>gi|406995634|gb|EKE14296.1| hypothetical protein ACD_12C00585G0001 [uncultured bacterium]
Length = 292
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 23/236 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE +R + + IGK I + I++ N V D + VL I+S R G
Sbjct: 1 MPELPEVETIKRKLAPNIIGKIISEIEILSPKNFVGD-------KNKVLNHKIISVDRYG 53
Query: 60 KNLWLRLDSP----P----FPSFQFGMTGAI-YIKGVAVTQYKRS-AVKDTDEWPSKYSK 109
K L +L +P P + + F ++G I + K V +K + ++ P+ ++
Sbjct: 54 KVLVFQLVNPLTREPNNCLYINIHFKLSGQILFSKNVNHAVFKNIIPFTNGNKMPANTTR 113
Query: 110 FFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
++ DG L F D R+F +++ S P+ G D L + TV+ T K +
Sbjct: 114 VIIKFSDGSGLFFNDLRKFGWIKI-----SDQPLKPKGIDVLDKQFTVNYLTVITKKTRK 168
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
IK LL+DQ I+GIGN A++ L+ A+IHP + + SL+ + L K IK+ A
Sbjct: 169 PIKVLLMDQDLITGIGNIYANDSLFLARIHPQRLSNSLTAQEIKLLYKSIKQTISA 224
>gi|427713691|ref|YP_007062315.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
6312]
gi|427377820|gb|AFY61772.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
6312]
Length = 280
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E + I+ + V + +F + ++G+++ + R+GK
Sbjct: 1 MPELPEVETVRRGLAELTLDVPILGGEVLYPKTVAYPLDPDEFISGLVGQSLQAWERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L+S + MTG ++ + K + V+ FF G EL
Sbjct: 61 YLIGKLNSRGWLVVHLRMTGQLFWLSQEIPMAKHTRVR----------LFF---GSGQEL 107
Query: 121 SFTDKRRFAKVRLLND----PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D+R F ++ L P +P ++ LGP+ L TV L IK LL
Sbjct: 108 RFVDQRTFGQMWWLPAADLLPQLMPTLAGLGPEPLGPDFTVSYLAQKLQHPHKPIKNALL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
DQ+ I+GIGN ADE L+ A+IHP L+ TL + IK V
Sbjct: 168 DQALIAGIGNIYADEALFLAQIHPQARCCDLTPVQIQTLHQKIKAV 213
>gi|226224165|ref|YP_002758272.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|386732302|ref|YP_006205798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes 07PF0776]
gi|406704339|ref|YP_006754693.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes L312]
gi|225876627|emb|CAS05336.1| Putative formamidopyrimidine-DNA glycosylase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|384391060|gb|AFH80130.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes 07PF0776]
gi|406361369|emb|CBY67642.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes L312]
Length = 273
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|333375898|ref|ZP_08467696.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330]
gi|332969356|gb|EGK08381.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330]
Length = 272
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKIV++I+ + SD + + + R+ K
Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPK--LRWQVPSDLADILQHQTVRQCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ GM+G++ I +DT K+ +DG L
Sbjct: 59 YLLIQLDTGVL-LIHLGMSGSLRI------------FRDTLPDAGKHDHADFVFEDGTVL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT-----DSLSKKKITIKALL 175
+ D RRF + L V EL + +EP+ DEFT D L K IK +
Sbjct: 106 RYHDPRRFGAILWL---AGVAEHHELLRNLGVEPLN-DEFTADYLFDRLRGKHRAIKLAI 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+D + + G+GN A+E L+QA I P + A SLSK+ CA L+ IK++
Sbjct: 162 MDNAIVVGVGNIYANESLFQAAISPNRPAQSLSKQECADLVVAIKQI 208
>gi|46907795|ref|YP_014184.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093101|ref|ZP_00230878.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b
H7858]
gi|405752786|ref|YP_006676251.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2378]
gi|67460686|sp|Q71ZA3.3|FPG_LISMF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|46881064|gb|AAT04361.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018541|gb|EAL09297.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. H7858]
gi|404221986|emb|CBY73349.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2378]
Length = 273
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTY 224
>gi|366158040|ref|ZP_09457902.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia sp. TW09308]
Length = 269
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I +T+ + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRI----LTEERP---------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|261856609|ref|YP_003263892.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus
c2]
gi|261837078|gb|ACX96845.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus
c2]
Length = 281
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G++I + + D +V D D A + G+ I++ R
Sbjct: 1 MPELPEVETTRRGLEPHLLGQRITSATVFDSRLRWRVRD-----DLAAWLEGRLIIAVSR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L L ++ GM+G++ I + + K V+ + ++
Sbjct: 56 RSKYLLLHFENGERLLIHLGMSGSLRIVTPDIPRRKHDHVE-------------ICINSS 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI--SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D RRF LL D P I LGP+ L + L K+K IK L
Sbjct: 103 KNLRFHDPRRFGA--LLTDHEQAPHIRLQNLGPEPLSDAFDTHYLGTQLHKRKQAIKPCL 160
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++ + + G+GN A+EVL+ + IHP A +L L+ IK V
Sbjct: 161 MNAAIVVGVGNIYANEVLFLSGIHPATPAHTLDHNQINLLVTAIKNV 207
>gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
Length = 275
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++E GK+I + I + A F ++ G+ IL R+GK
Sbjct: 1 MPELPEVETVRKTLKELVTGKEIGQVSIHWPKMIKQPGEAEQFADALAGQTILDVGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D + + + ++G + A+ +E K++ DG EL
Sbjct: 61 FLIIYTDD-------YALVSHLRMEG-------KYALYSKEEDKDKHTHVIFHFTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T L+ +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAKGEEFASLPLSQLGPEPFSEEFTPQFLQQRLAGTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK----CIKEVREALGVSLQFY 233
+ G+GN DE L++A IHP + A SLS + L K + E E G +++ Y
Sbjct: 167 KAVVGLGNIYVDEALFRAGIHPERLASSLSDDEIGRLHKEIVATLSEAVEKGGSTIRSY 225
>gi|83643461|ref|YP_431896.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
gi|123535001|sp|Q2SPF3.1|FPG_HAHCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|83631504|gb|ABC27471.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
Length = 271
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H G+KI++ I + + D A+ GK +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVAPHITGRKILQVNIYEPR--LRWPVPMDLPAAAQGKTVLNVTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L F GM+G + I + K V + L+ + L
Sbjct: 59 YLLINLGDDEL-LFHLGMSGNLRIVAPETPRMKHDHVD-------------ILLEGDITL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF + LLN PT P+ LGP+ L + + + ++K +K L+DQ+
Sbjct: 105 RYNDPRRFGCLLLLNPPTQEHPLLKHLGPEPLSDQFSGELLYKRSRQRKSPVKTFLMDQA 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ A I P + A +S + L + +++V
Sbjct: 165 IVVGVGNIYANEALFLAGIRPTRAAGEVSLKRYQVLAEAVRKV 207
>gi|432676759|ref|ZP_19912203.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE142]
gi|431210667|gb|ELF08721.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE142]
Length = 269
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+++++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILRAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|254515835|ref|ZP_05127895.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3]
gi|219675557|gb|EED31923.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3]
Length = 270
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H G+++V ++ D ++ V S + G++IL+ R+ K
Sbjct: 1 MPELPEVETTRRGLRAHSEGRQVV-AVTLRDTRLRWPVPTS-LPQMLRGQSILALERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R+D GM+G++ + + P+K+ +ELD G L
Sbjct: 59 YLLFRMDRGTL-LVHLGMSGSLRVLLEPLA-------------PAKHDHIDIELDSGALL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D RRF + + P+ +LGP+ L + D +KI IK ++D +
Sbjct: 105 RYNDPRRFGSFQWFATGEPLAPLGKLGPEPLSDDFHGGRLFDLSRGRKIAIKPFIMDGAT 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E LY A I P + A +S+ L IK+V
Sbjct: 165 VVGVGNIYASEALYLAGIRPDRAASRVSRVRYELLAGHIKQV 206
>gi|68536282|ref|YP_250987.1| formamidopyrimidine-DNA glycosylase [Corynebacterium jeikeium K411]
gi|90101301|sp|Q4JUY8.3|FPG_CORJK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|68263881|emb|CAI37369.1| mutM [Corynebacterium jeikeium K411]
Length = 288
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 29/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +EEH +G++ + V G +S+ + + R+GK
Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVCHPRAVRSG-EPEVLVSSLRDATVTAVKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL GM+G + V + + S + + L DG EL
Sbjct: 60 FLWLDFGEDFLLQVHLGMSGQML-------------VAEPGQVQSPHVRIRAGLSDGREL 106
Query: 121 SFTDKRRFAKVRL-------------LNDPTSVPP--ISELGPDALLEPMTVDEFTDSLS 165
F D+R F + RL + P + P +S + D L +
Sbjct: 107 CFVDQRTFGEWRLEKAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMK 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
K+ +K +LL+Q +SGIGN ADE L+ A + P ++A LS+ + +L+ EV E
Sbjct: 167 SKRAAVKTVLLNQEVVSGIGNIYADEALFLAGVRPRRSAALLSRPTLHRVLQSAAEVME 225
>gi|50555437|ref|XP_505127.1| YALI0F07623p [Yarrowia lipolytica]
gi|49650997|emb|CAG77934.1| YALI0F07623p [Yarrowia lipolytica CLIB122]
Length = 446
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 16/114 (14%)
Query: 103 WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLN-----DPTSVPPISELGPD-------- 149
WP ++ K + L+DG +L+F D RR A+V+L D V P+ +LGPD
Sbjct: 157 WPPRFVKMDLTLEDGTKLAFYDARRLARVKLFTIAEPLDIYKVDPMKKLGPDYSKSPDDE 216
Query: 150 ---ALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHP 200
A L+P+ +D F + KK IK++LLDQS SG+GNWVADE+LY +++HP
Sbjct: 217 HTPAALKPLDLDAFKAKIQAKKAPIKSVLLDQSLFSGVGNWVADEILYHSRVHP 270
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPEL EV A + GKK+ ++ + D V + + + ++ G+ I + R G
Sbjct: 1 MPELGEVAHAASVFAKFATGKKVAEADVQPDKIVFGSETGHEALQKALQGRVITNVSRHG 60
Query: 60 KNLWLRLDSPPFPS--FQFGMTGAIYIKG 86
K WL LD + FGMTG I +KG
Sbjct: 61 KYWWLTLDGDADNAVLLHFGMTGYISVKG 89
>gi|374338496|ref|YP_005095211.1| Formamidopyrimidine-DNA glycosylase [Streptococcus macedonicus
ACA-DC 198]
gi|372284611|emb|CCF02899.1| Formamidopyrimidine-DNA glycosylase [Streptococcus macedonicus
ACA-DC 198]
Length = 296
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE ++G+ + R+
Sbjct: 24 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIIKTDLVAFETEIVGQTFQNIGRR 79
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK--YSKFF---VE 113
GK L L L+ S M G + +P + Y+K F +
Sbjct: 80 GKYLLLMLNKQVIIS-HLRMEGKYLL------------------FPEQVPYNKHFHVLFQ 120
Query: 114 LDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
LDDG L + D R+F + LL N + +LGP+ E + EFT L K +
Sbjct: 121 LDDGSTLVYQDVRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKTSKKFV 180
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
K LLDQ+ + G+GN DEVL+ AKIHP + + SL+
Sbjct: 181 KPYLLDQTLVVGLGNIYVDEVLWAAKIHPERISSSLT 217
>gi|193070399|ref|ZP_03051341.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019]
gi|192956338|gb|EDV86799.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019]
Length = 269
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+++++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILRAVV-RNGRLRWPVSEELYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|404328595|ref|ZP_10969043.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 279
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK + I + + + F ++G+ + R+GK
Sbjct: 1 MPELPEVETVKRTLNELVIGKTVANVEIRWPHIIRRPQDSRQFARLLIGETLHHVGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L D S M G + +++E P +Y+ DG
Sbjct: 61 FLLLCFDDEVVVS-HLRMEGRYRL--------------ESEEVPVDRYTHVIFHFTDGTA 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKI-TIKALLL 176
L + D R+F + L P+S+LGP+ P+ D F S+ +K IK LLL
Sbjct: 106 LRYRDVRKFGTMHLFEKGREWDSLPLSKLGPEPF-SPVFTDAFLRSVCRKTTRAIKPLLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREAL 226
DQ+ + G+GN DE L++A+IHPL A +L+ + + L K I E +REA+
Sbjct: 165 DQTAVVGLGNIYVDESLFRARIHPLTPAANLTVKQISALRKAIVETLREAV 215
>gi|423335629|ref|ZP_17313404.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri ATCC
53608]
gi|337728859|emb|CCC03978.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri ATCC
53608]
Length = 276
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +KI + + + V DF +++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVE--DFRQALIGQTIENVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L R + M G Y + + P K++ E DG E
Sbjct: 59 YLLFRFTNDLTMISHLRMEGKYYNQPIG--------------GPIDKHTHVVFEFTDGTE 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L+ D +V + +GP+ + T+ FT L K + IK LL+
Sbjct: 105 LCYQDTRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLN 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL 226
Q +++G+GN DEVL+ I+P Q A +L+ A L + IKE+ A+
Sbjct: 165 QRHVAGLGNIYVDEVLWMTGINPEQPANTLTANQIAELRENIIKELATAI 214
>gi|340794694|ref|YP_004760157.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium variabile DSM
44702]
gi|340534604|gb|AEK37084.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium variabile DSM
44702]
Length = 290
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G IV + + V A+ EA + I + R+G
Sbjct: 1 MPELPEVEVVRRGLAEHITGATIVGTEVLHPRAVRGQPGGAAALEAGLEDARITALRRRG 60
Query: 60 KNLWLRLDSPPFPS-----------FQFGMTGAIYIK--GVAVTQYKRSAVKDTDEWPSK 106
K LW+ L+ P GM+G + + G + + R
Sbjct: 61 KYLWIDLEYPRGGQGSGQSSGRCLLVHLGMSGQMLLGEPGQVTSPHLRI----------- 109
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
S + LELSF D+R F + L P P+ + D L + K
Sbjct: 110 RSLLVTDTGRELELSFVDQRTFGRWEL-TAPGVTDPVPHIAVDPLDAAFDAAHTARVIRK 168
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K+ IK +LLDQ+ +SGIGN ADE L+ A++HP + A ++ + +LL EV
Sbjct: 169 KRSEIKRVLLDQTVVSGIGNIYADEALWAAQVHPRKKATAMRQTDVISLLDAATEV 224
>gi|422409795|ref|ZP_16486756.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
F2-208]
gi|313608605|gb|EFR84469.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
F2-208]
Length = 273
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVCPERAANSLSDKEIKHIFEATKSIMTEAVALGGSTVRTY 224
>gi|258652106|ref|YP_003201262.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM
44233]
gi|258555331|gb|ACV78273.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM
44233]
Length = 285
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G++I + D V DF+A + G+ + R+G
Sbjct: 1 MPELPEVETVRRGLLTHLAGRRIRTVRVHHDRAVRRHPGGPDDFQAVLAGRLVRDVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-GL 118
K LW LD GM+G + G A E + + + DD G
Sbjct: 61 KYLWWALDDGDAVLAHLGMSGQFRVAGPA---------GPIPEPLHPHLRIRFDFDDAGP 111
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R F + +P I+ + D L + +L K+ IK LLD
Sbjct: 112 SLDFLDQRTFGGMTYAPGGAELPAAIAHIARDPLDPEFSAAGAVAALRHKRTGIKRALLD 171
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q+ +SG+GN ADE L++A++H + L++ AT+L EV
Sbjct: 172 QTVVSGVGNIYADEALWRARMHFDRPTERLTRPQAATVLAAATEV 216
>gi|428220211|ref|YP_007104381.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
7502]
gi|427993551|gb|AFY72246.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
7502]
Length = 279
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 21/228 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ E ++I+ S I + + + +F + GK ILS HR+GK
Sbjct: 1 MPELPEVETVRRSLHESTCDRQIISSEILLERTIAYPHNPEEFNLGLKGKRILSWHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + MTG + ++ + + ++ + + EL
Sbjct: 61 YLLAELSNDSWLGVHLRMTGKLLWCDRSLPIHTHTRIR-------------IYFANQQEL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPP------ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
F D+R F ++ L+ P+ + P + +LG + + + L K IK
Sbjct: 108 RFNDQRTFGQMWLV--PSGINPEEIISGVQKLGMEPFDPNFNYEYLQNKLRKSDRPIKNS 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ+ I+GIGN ADE L+ + IHP + L+K +L++ I+ V
Sbjct: 166 LLDQTVIAGIGNIYADESLFLSGIHPQTKSNQLTKSQLESLVQAIRRV 213
>gi|82779125|ref|YP_405474.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae Sd197]
gi|309784388|ref|ZP_07679027.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617]
gi|90101317|sp|Q329M2.3|FPG_SHIDS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|81243273|gb|ABB63983.1| formamidopyrimidine DNA glycosylase [Shigella dysenteriae Sd197]
gi|308927895|gb|EFP73363.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617]
Length = 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILTEGLP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWAKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|339007841|ref|ZP_08640415.1| formamidopyrimidine-DNA glycosylase [Brevibacillus laterosporus LMG
15441]
gi|338775044|gb|EGP34573.1| formamidopyrimidine-DNA glycosylase [Brevibacillus laterosporus LMG
15441]
Length = 274
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + KKI + + + F++ ++G+ I + R+ K
Sbjct: 1 MPELPEVETVVRTLRTLVLNKKIERVSVLLPRIIRRPADVEQFKSILVGQTIHAVERRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LD S M G R V + E K++ DG EL
Sbjct: 61 FIKFILDQDVLIS-HLRMEG-------------RYGVYQSSEEIEKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + L V P+ +LGP+ L E T + L +K IK LLL+Q
Sbjct: 107 RYRDVRQFGTMDVIPLGKEQEVEPLKKLGPEPLDEAFTPTLLSSMLQRKTTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESC----ATLLKCIKEVREALGVSLQFY 233
++ G+GN DE L++A IHP + A +L+ + ++++ ++E +A G S++ Y
Sbjct: 167 EFMVGLGNIYVDEALFRANIHPERVANTLTNQQIEILHTSIVQTLQEAIDAGGSSIKSY 225
>gi|329768945|ref|ZP_08260371.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325]
gi|328836167|gb|EGF85849.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325]
Length = 286
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIA-------DDNKV-IDGVSASDFEASVLGKAI 52
MPELPEVE + +E+ KKI+ + D NK+ I S DF +V+GK I
Sbjct: 1 MPELPEVENIKLGLEDSLKNKKILSVTFSNTVKEGHDLNKMPIVKQSLIDFSNNVVGKKI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
R+GK L+L L+ + FGMTGA ++ + T++ K+
Sbjct: 61 KELSRRGKYLYLALNKGYIIT-HFGMTGAFFLV--------NDIAEITNKNYYKHRHVIF 111
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI--- 169
ELD +L F+D RRF ++R + P L P+ E F D L +KK
Sbjct: 112 ELDTNEKLVFSDIRRFGELRYVEKIGEFKPFVNLAPEPF-EKKAKQYFLDKLLEKKYKDQ 170
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
+IKALLLD + G GN EVLY+ +IHPL L+
Sbjct: 171 SIKALLLDGNVFCGCGNIYDCEVLYRKRIHPLTKPCELT 209
>gi|300948032|ref|ZP_07162172.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1]
gi|300954471|ref|ZP_07166921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1]
gi|301028394|ref|ZP_07191640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1]
gi|301644301|ref|ZP_07244303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1]
gi|312972080|ref|ZP_07786254.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70]
gi|331644353|ref|ZP_08345482.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736]
gi|331655267|ref|ZP_08356266.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718]
gi|386282687|ref|ZP_10060334.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 4_1_40B]
gi|415774002|ref|ZP_11486549.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3431]
gi|417264250|ref|ZP_12051644.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 2.3916]
gi|417273293|ref|ZP_12060640.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 2.4168]
gi|417279123|ref|ZP_12066433.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.2303]
gi|417293643|ref|ZP_12080922.1| DNA-formamidopyrimidine glycosylase [Escherichia coli B41]
gi|417615226|ref|ZP_12265676.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_EH250]
gi|417620301|ref|ZP_12270704.1| formamidopyrimidine-DNA glycosylase [Escherichia coli G58-1]
gi|417636606|ref|ZP_12286814.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_S1191]
gi|418305273|ref|ZP_12917067.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNF18]
gi|419144746|ref|ZP_13689473.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6A]
gi|419150249|ref|ZP_13694897.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6B]
gi|419156144|ref|ZP_13700699.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6C]
gi|419161488|ref|ZP_13705980.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6D]
gi|419166523|ref|ZP_13710972.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6E]
gi|419939995|ref|ZP_14456764.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 75]
gi|422768575|ref|ZP_16822299.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1520]
gi|422773233|ref|ZP_16826918.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E482]
gi|422818801|ref|ZP_16867013.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M919]
gi|423703154|ref|ZP_17677586.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H730]
gi|425117244|ref|ZP_18519021.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0566]
gi|425121974|ref|ZP_18523649.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0569]
gi|425274918|ref|ZP_18666298.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW15901]
gi|425285498|ref|ZP_18676511.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW00353]
gi|432367122|ref|ZP_19610236.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE10]
gi|432566027|ref|ZP_19802583.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE51]
gi|432638847|ref|ZP_19874710.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE81]
gi|432662849|ref|ZP_19898479.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE111]
gi|432687458|ref|ZP_19922746.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE156]
gi|432688908|ref|ZP_19924177.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE161]
gi|432706376|ref|ZP_19941470.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE171]
gi|432739143|ref|ZP_19973871.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE42]
gi|432957584|ref|ZP_20148990.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE197]
gi|433050096|ref|ZP_20237419.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE120]
gi|442595479|ref|ZP_21013325.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|299878505|gb|EFI86716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1]
gi|300318550|gb|EFJ68334.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1]
gi|300452403|gb|EFK16023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1]
gi|301077339|gb|EFK92145.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1]
gi|310334457|gb|EFQ00662.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70]
gi|315618662|gb|EFU99248.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3431]
gi|323934820|gb|EGB31202.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1520]
gi|323939606|gb|EGB35812.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E482]
gi|331036647|gb|EGI08873.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736]
gi|331047282|gb|EGI19360.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718]
gi|339417371|gb|AEJ59043.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNF18]
gi|345358504|gb|EGW90690.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_EH250]
gi|345370706|gb|EGX02682.1| formamidopyrimidine-DNA glycosylase [Escherichia coli G58-1]
gi|345385111|gb|EGX14959.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_S1191]
gi|377989176|gb|EHV52344.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6A]
gi|377989540|gb|EHV52706.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6B]
gi|377993213|gb|EHV56351.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6C]
gi|378004187|gb|EHV67215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6D]
gi|378006747|gb|EHV69720.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC6E]
gi|385537604|gb|EIF84474.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M919]
gi|385708711|gb|EIG45716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H730]
gi|386120310|gb|EIG68940.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 4_1_40B]
gi|386221959|gb|EII44388.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 2.3916]
gi|386234470|gb|EII66448.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 2.4168]
gi|386237900|gb|EII74840.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.2303]
gi|386251831|gb|EIJ01523.1| DNA-formamidopyrimidine glycosylase [Escherichia coli B41]
gi|388404757|gb|EIL65204.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 75]
gi|408189834|gb|EKI15528.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW15901]
gi|408198167|gb|EKI23410.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW00353]
gi|408563624|gb|EKK39755.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0566]
gi|408564719|gb|EKK40820.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0569]
gi|430890937|gb|ELC13485.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE10]
gi|431089595|gb|ELD95401.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE51]
gi|431168323|gb|ELE68569.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE81]
gi|431196784|gb|ELE95689.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE111]
gi|431219109|gb|ELF16527.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE156]
gi|431235630|gb|ELF30879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE161]
gi|431240566|gb|ELF35017.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE171]
gi|431279243|gb|ELF70211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE42]
gi|431463462|gb|ELH43652.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE197]
gi|431561943|gb|ELI35279.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE120]
gi|441604328|emb|CCP98459.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
Length = 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + +++G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMNNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|294671315|ref|ZP_06736166.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306947|gb|EFE48190.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 273
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK IV++ + + D + ++ G+ +L R+ K
Sbjct: 1 MPELPEVETTLRGIAPHISGKTIVRTTVRQAK--LRHPVPPDLDDTLNGETVLRCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L GM+G++ + + D K+ +E DG L
Sbjct: 59 YLLVHLPQGIL-LIHLGMSGSLRL-------FTSGNAPDA----GKHDHVEIEFSDGTLL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF V P P+ L P+ L T D ++L K++ IK++L+D
Sbjct: 107 RYHDPRRFGIVSWYPGPEETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNK 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ A I P + A+ +S++ A L+ I+E
Sbjct: 167 TVVGVGNIYANESLFAAGIAPNRPAMQISRKEAAALVHHIRET 209
>gi|416427408|ref|ZP_11693543.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416432620|ref|ZP_11696299.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416437520|ref|ZP_11698870.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443427|ref|ZP_11703040.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416450326|ref|ZP_11707455.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460265|ref|ZP_11714648.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416463588|ref|ZP_11716038.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416479826|ref|ZP_11722583.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416490045|ref|ZP_11726623.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416501942|ref|ZP_11732490.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416508276|ref|ZP_11735980.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416517223|ref|ZP_11739386.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416525366|ref|ZP_11741579.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416538871|ref|ZP_11749635.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416541337|ref|ZP_11750924.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416552801|ref|ZP_11757362.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562231|ref|ZP_11761988.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416571085|ref|ZP_11766484.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579970|ref|ZP_11771544.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586391|ref|ZP_11775475.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589507|ref|ZP_11777092.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597608|ref|ZP_11782189.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416607050|ref|ZP_11788264.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416611524|ref|ZP_11790898.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416618571|ref|ZP_11794623.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631111|ref|ZP_11801024.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416645096|ref|ZP_11807262.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416648156|ref|ZP_11808869.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416661323|ref|ZP_11815497.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416668072|ref|ZP_11818698.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416681221|ref|ZP_11823631.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416695684|ref|ZP_11827761.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416709040|ref|ZP_11833844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416712935|ref|ZP_11836597.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416721110|ref|ZP_11842641.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416722838|ref|ZP_11843664.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416735020|ref|ZP_11851422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741436|ref|ZP_11855130.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416746612|ref|ZP_11857902.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416755277|ref|ZP_11861938.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416764997|ref|ZP_11868420.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416771820|ref|ZP_11872999.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417470781|ref|ZP_12166891.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|418485005|ref|ZP_13053992.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418491148|ref|ZP_13057675.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418494704|ref|ZP_13061155.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418499845|ref|ZP_13066246.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505155|ref|ZP_13071504.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510387|ref|ZP_13076668.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418525084|ref|ZP_13091067.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322612892|gb|EFY09844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618957|gb|EFY15844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625266|gb|EFY22093.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322630067|gb|EFY26840.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634258|gb|EFY30993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635841|gb|EFY32550.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643021|gb|EFY39598.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645051|gb|EFY41582.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649849|gb|EFY46272.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653056|gb|EFY49391.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661125|gb|EFY57353.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662386|gb|EFY58599.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667264|gb|EFY63430.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674359|gb|EFY70452.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678433|gb|EFY74494.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680939|gb|EFY76973.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687125|gb|EFY83098.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195849|gb|EFZ81021.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198234|gb|EFZ83340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200852|gb|EFZ85922.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210481|gb|EFZ95367.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216231|gb|EGA00959.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220454|gb|EGA04908.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225317|gb|EGA09551.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228431|gb|EGA12562.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234252|gb|EGA18340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237237|gb|EGA21304.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244756|gb|EGA28760.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323245869|gb|EGA29859.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250948|gb|EGA34824.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257304|gb|EGA41003.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262228|gb|EGA45789.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264561|gb|EGA48065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323268851|gb|EGA52309.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|353624424|gb|EHC73465.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|363552465|gb|EHL36754.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559027|gb|EHL43205.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363561233|gb|EHL45361.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363561324|gb|EHL45450.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363563973|gb|EHL48038.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363573313|gb|EHL57199.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363574582|gb|EHL58449.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366056648|gb|EHN20960.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366061465|gb|EHN25711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366063392|gb|EHN27611.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366068776|gb|EHN32910.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366070033|gb|EHN34150.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366076893|gb|EHN40926.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366829786|gb|EHN56661.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207031|gb|EHP20532.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 104 RYTDPRRFGTWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKMAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|450091416|ref|ZP_21855482.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans W6]
gi|450150650|ref|ZP_21876685.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 14D]
gi|449219372|gb|EMC19341.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans W6]
gi|449233279|gb|EMC32356.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 14D]
Length = 273
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFKSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|432487406|ref|ZP_19729312.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE212]
gi|432672739|ref|ZP_19908257.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE119]
gi|433175540|ref|ZP_20360044.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE232]
gi|431013238|gb|ELD26971.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE212]
gi|431207440|gb|ELF05696.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE119]
gi|431688222|gb|ELJ53761.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE232]
Length = 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + +++G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMNNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECKLLARVIKAV 205
>gi|410866683|ref|YP_006981294.1| Formamidopyrimidine-DNA glycosylase/AP lyase [Propionibacterium
acidipropionici ATCC 4875]
gi|410823324|gb|AFV89939.1| Formamidopyrimidine-DNA glycosylase/AP lyase [Propionibacterium
acidipropionici ATCC 4875]
Length = 285
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 26/233 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE R + + G ++ + D V DG +DF SV G+ + + R
Sbjct: 1 MPELPEVETVRLGLAQTVAGARVRGVDVLDARAVRRHADG--PADFADSVTGRRLGTPRR 58
Query: 58 KGKNLWLRLDSPPFPSF-------QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
+GK LW L+ GM+G Q++ + D ++++
Sbjct: 59 RGKYLWFPLEVGATSDTACDALLCHLGMSG----------QFR---IDDAQAPLLRHTRV 105
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKI 169
++LD G +L F D+R F +++ +P IS +GPD + L ++
Sbjct: 106 VLDLDGGRQLRFIDQRLFGGMQVSRGGGELPGEISHIGPDPFDPAFDAADAGRRLRARRS 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
T+K LLDQS +SGIGN ADE L++A+ HP L L + +EV
Sbjct: 166 TLKRALLDQSLVSGIGNIYADETLWRARRHPETPTSRLRAAEALALYETAREV 218
>gi|259503618|ref|ZP_05746520.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041]
gi|259168442|gb|EEW52937.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041]
Length = 277
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +KI + + + V F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAKDRKINAIDVYYGKTITNDVEK--FRQALIGQTIEDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G Q + K++ + DG EL
Sbjct: 59 YLLFRF------SNNLTMVSHLRMEGKYYNQPIGGPI-------DKHTHVVFQFTDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D +V + LGP+ +D F D L + + IK LL+Q
Sbjct: 106 CYHDTRKFGRMTLVKTGDEKTVGGLKTLGPEPTAADFKLDFFRDELHRSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+++G+GN ADEVL+ +KI+P Q A SLS + L
Sbjct: 166 QHVAGLGNIYADEVLWMSKINPEQPANSLSPDQVQAL 202
>gi|302558161|ref|ZP_07310503.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus
Tu4000]
gi|302475779|gb|EFL38872.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus
Tu4000]
Length = 286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHARAVRRHLAGADDFAHRLKGHRVGVPRRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + ++ A K V+ +F LD
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAPDEKHLRVR---------VRFTDSLD--T 109
Query: 119 ELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKALL 175
EL F D+R F + L N P +P I+ + D L +P+ +E F +L ++ TIK L
Sbjct: 110 ELRFVDQRTFGGLSLHDNTPEGLPDVIAHIARDPL-DPLFDEEAFHRALRSRRTTIKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LDQS ISG+GN ADE L++A+IH + ++ LL +++V A
Sbjct: 169 LDQSLISGVGNIYADEALWRARIHYERPTAGFTRPRTLLLLGHVRDVMNA 218
>gi|418472127|ref|ZP_13041897.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicoflavus
ZG0656]
gi|371547287|gb|EHN75677.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicoflavus
ZG0656]
Length = 286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 23/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHIAGPDDFAHRLGGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDD- 116
K LWL L D+ GM+G + ++ E P+ K+ + V D
Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQ--------------PHETPAEKHLRIRVRFADA 106
Query: 117 -GLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIK 172
G EL F D+R F + L + P I+ + D L +P+ DE F +L +K+ T+K
Sbjct: 107 LGTELRFVDQRTFGGLSLHDTSADGLPDVIAHIARDPL-DPLFDDEAFHLALRRKRTTVK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ LL +++V A
Sbjct: 166 RALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTTELLGHVRDVMNA 218
>gi|417394272|ref|ZP_12156505.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|417488206|ref|ZP_12172688.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|418514645|ref|ZP_13080843.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|353606114|gb|EHC60429.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353632253|gb|EHC79358.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|366078373|gb|EHN42375.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKMAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|422783770|ref|ZP_16836553.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10509]
gi|323975145|gb|EGB70250.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10509]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILSEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|110643876|ref|YP_671606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536]
gi|122957892|sp|Q0TBH4.1|FPG_ECOL5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|110345468|gb|ABG71705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEA RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVEAIRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|449896749|ref|ZP_21789909.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans R221]
gi|449261714|gb|EMC59180.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans R221]
Length = 272
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|387785698|ref|YP_006250794.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans LJ23]
gi|379132099|dbj|BAL68851.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans LJ23]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQAIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|261408691|ref|YP_003244932.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10]
gi|261285154|gb|ACX67125.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10]
Length = 277
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL---GKAILSAHR 57
MPELPEVE +R + + GK I + + ++I D EA G + R
Sbjct: 1 MPELPEVETVKRTLNQLIKGKHI-DHVSVNLPRIIQ--RPDDIEAFAFMLKGHTVEGVER 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK L + LD S M G R V +E K++ DG
Sbjct: 58 RGKFLRILLDGLVLVS-HLRMEG-------------RYGVYRAEEPVEKHTHVIFHFSDG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL + D R+F + L + P+++LG + L + T F + + KK IKA+L
Sbjct: 104 TELRYKDVRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQ 231
L+Q+Y+ GIGN DE L++AKIHP + A SL L I E +A G S++
Sbjct: 164 LNQAYVVGIGNIYVDEALFRAKIHPERNANSLKDAELKRLYHAIVDTLSEAVDAGGSSIK 223
Query: 232 FY 233
Y
Sbjct: 224 SY 225
>gi|444919930|ref|ZP_21239774.1| Formamidopyrimidine-DNA glycosylase [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508797|gb|ELV08965.1| Formamidopyrimidine-DNA glycosylase [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 272
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE +R + + + + I K I + V D + + + I R
Sbjct: 1 MPELPEVETTKRGVAPYLLNESITKIDIHHRSLRYPVEDAILLME------NQTITDVTR 54
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L + + + GM+G++ V DE K+ L +G
Sbjct: 55 RAKYLMIH-TAGFYLIVHLGMSGSL-------------RVSLPDEPLKKHDHLVFHLSNG 100
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
EL + D RRF V+L + +++L P+ L + VD F + +KK IKA L+D
Sbjct: 101 RELRYHDPRRFGFVQLFQGDVTPDYLTKLAPEPLSDEFNVDYFQSIIVRKKQPIKAFLMD 160
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQ 231
Q ++ G+GN A+E L+ + IHPL +L++ C TL + +R L S+Q
Sbjct: 161 QRFVVGVGNIYANESLFMSGIHPLTRTQNLTQAQCTTL---VSNIRAVLARSIQ 211
>gi|329929158|ref|ZP_08282944.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5]
gi|328936835|gb|EGG33270.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5]
Length = 277
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL---GKAILSAHR 57
MPELPEVE +R + + GK I + + ++I D EA G + R
Sbjct: 1 MPELPEVETVKRTLNQLIKGKHI-DHVSVNLPRIIQ--RPDDIEAFAFMLKGHTVEGVER 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK L + LD S M G R V +E K++ DG
Sbjct: 58 RGKFLRILLDGLVLVS-HLRMEG-------------RYGVYRAEEPVEKHTHVIFHFSDG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL + D R+F + L + P+++LG + L + T F + + KK IKA+L
Sbjct: 104 TELRYKDVRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI----KEVREALGVSLQ 231
L+Q+Y+ GIGN DE L++AKIHP + A SL L I E +A G S++
Sbjct: 164 LNQAYVVGIGNIYVDEALFRAKIHPERNANSLKDAELKRLYHAIVDTLSEAVDAGGSSIK 223
Query: 232 FY 233
Y
Sbjct: 224 SY 225
>gi|422416067|ref|ZP_16493024.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023]
gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D ++ +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DENDEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFKAKVRPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTY 224
>gi|227543927|ref|ZP_03973976.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus reuteri CF48-3A]
gi|338202618|ref|YP_004648763.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112]
gi|227186078|gb|EEI66149.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus reuteri CF48-3A]
gi|336447858|gb|AEI56473.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112]
Length = 276
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +KI + + + V DF +++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVE--DFRQALIGQTIENVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L R + M G Y + + P K++ E DG E
Sbjct: 59 YLLFRFTNDLTMISHLRMEGKYYNQPIG--------------GPIDKHTHVVFEFTDGTE 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L+ D +V + +GP+ + T+ FT L K + IK LL+
Sbjct: 105 LCYQDTRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLN 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL 226
Q +++G+GN DEVL+ I+P Q A +L+ L K IKE+ A+
Sbjct: 165 QRHVAGLGNIYVDEVLWMTGINPEQPANTLTASQITELRKNIIKELATAI 214
>gi|124005766|ref|ZP_01690605.1| formamidopyrimidine-DNA glycosylase N-terminal domain family
[Microscilla marina ATCC 23134]
gi|123988834|gb|EAY28440.1| formamidopyrimidine-DNA glycosylase N-terminal domain family
[Microscilla marina ATCC 23134]
Length = 265
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ E + +K+V+ IAD + +A + R GK
Sbjct: 1 MPELPEVERFKQYFEGTALHQKVVQVEIADAG--VLACTAETLKEVAEKHTFDKTDRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L++ + FGM+G++ +Y R P ++ + L +G L
Sbjct: 59 YLFIETSADKVLMIHFGMSGSL--------KYYRDD-------PPRFGRVVFHLANGFHL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+F ++ + ++ + +L DA M+ +EF + + +K IK LLL+Q
Sbjct: 104 AFDCPRKFGRIDVADNVKAYQAKKKLSTDAY--KMSWEEFEQNTAGRKGLIKPLLLNQQV 161
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFAKP 240
+G+GNW+ADE+L+QA++HP LSK + ++++ + Y Y
Sbjct: 162 AAGVGNWIADEILFQARVHPETRTNKLSKNELRLVYDKMRDILQTAVSHEANYNHYPKDY 221
Query: 241 YVHKK 245
++H++
Sbjct: 222 FIHRR 226
>gi|193063825|ref|ZP_03044912.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22]
gi|194430623|ref|ZP_03063077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171]
gi|218697356|ref|YP_002405023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 55989]
gi|260846600|ref|YP_003224378.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H2 str. 12009]
gi|307314280|ref|ZP_07593888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W]
gi|378710923|ref|YP_005275816.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KO11FL]
gi|386611006|ref|YP_006126492.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA
glycosylase [Escherichia coli W]
gi|386699406|ref|YP_006163243.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli KO11FL]
gi|386711530|ref|YP_006175251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli W]
gi|407471628|ref|YP_006781929.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407479720|ref|YP_006776869.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410480278|ref|YP_006767824.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415800570|ref|ZP_11499312.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E128010]
gi|415831272|ref|ZP_11517019.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OK1357]
gi|417173480|ref|ZP_12003276.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.2608]
gi|417185573|ref|ZP_12010974.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 93.0624]
gi|417243805|ref|ZP_12038203.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 9.0111]
gi|417249708|ref|ZP_12041492.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 4.0967]
gi|417625748|ref|ZP_12276038.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_H.1.8]
gi|417807315|ref|ZP_12454245.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. LB226692]
gi|417835057|ref|ZP_12481497.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 01-09591]
gi|417866201|ref|ZP_12511243.1| hypothetical protein C22711_3131 [Escherichia coli O104:H4 str.
C227-11]
gi|419291853|ref|ZP_13833936.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11A]
gi|419297134|ref|ZP_13839169.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11B]
gi|419302709|ref|ZP_13844700.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11C]
gi|419308668|ref|ZP_13850557.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11D]
gi|419313689|ref|ZP_13855547.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11E]
gi|419319118|ref|ZP_13860913.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12A]
gi|419325561|ref|ZP_13867242.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12B]
gi|419336991|ref|ZP_13878501.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12D]
gi|419342210|ref|ZP_13883663.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12E]
gi|419394129|ref|ZP_13934924.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15A]
gi|419398914|ref|ZP_13939676.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15B]
gi|419404188|ref|ZP_13944905.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15C]
gi|419409350|ref|ZP_13950033.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15D]
gi|419414900|ref|ZP_13955533.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15E]
gi|419872334|ref|ZP_14394371.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H2 str. CVM9450]
gi|419929108|ref|ZP_14446797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 541-1]
gi|422989851|ref|ZP_16980623.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
C227-11]
gi|422996746|ref|ZP_16987509.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
C236-11]
gi|423001898|ref|ZP_16992651.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
09-7901]
gi|423005554|ref|ZP_16996299.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
04-8351]
gi|423012060|ref|ZP_17002792.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-3677]
gi|423021287|ref|ZP_17011994.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4404]
gi|423026454|ref|ZP_17017149.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4522]
gi|423032275|ref|ZP_17022961.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4623]
gi|423035146|ref|ZP_17025824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040272|ref|ZP_17030941.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423046956|ref|ZP_17037615.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055495|ref|ZP_17044301.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057487|ref|ZP_17046286.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|429721322|ref|ZP_19256241.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773220|ref|ZP_19305236.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02030]
gi|429778583|ref|ZP_19310551.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782419|ref|ZP_19314345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02092]
gi|429787835|ref|ZP_19319724.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02093]
gi|429793632|ref|ZP_19325476.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02281]
gi|429800213|ref|ZP_19332003.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02318]
gi|429803824|ref|ZP_19335582.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02913]
gi|429808471|ref|ZP_19340188.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-03439]
gi|429814170|ref|ZP_19345843.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-04080]
gi|429819374|ref|ZP_19351005.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-03943]
gi|429905724|ref|ZP_19371700.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429909862|ref|ZP_19375824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915728|ref|ZP_19381674.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429920776|ref|ZP_19386703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926584|ref|ZP_19392495.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930517|ref|ZP_19396416.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937053|ref|ZP_19402938.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942737|ref|ZP_19408609.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945417|ref|ZP_19411277.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429952975|ref|ZP_19418820.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956332|ref|ZP_19422162.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432767028|ref|ZP_20001441.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE48]
gi|254789437|sp|B7L758.1|FPG_ECO55 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|192930540|gb|EDV83147.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22]
gi|194411335|gb|EDX27703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171]
gi|218354088|emb|CAV00637.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli 55989]
gi|257761747|dbj|BAI33244.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H2 str. 12009]
gi|306906103|gb|EFN36622.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W]
gi|315062923|gb|ADT77250.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA
glycosylase [Escherichia coli W]
gi|323160757|gb|EFZ46693.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E128010]
gi|323182663|gb|EFZ68066.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OK1357]
gi|323376484|gb|ADX48752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KO11FL]
gi|340732286|gb|EGR61424.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 01-09591]
gi|340738043|gb|EGR72294.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. LB226692]
gi|341919490|gb|EGT69101.1| hypothetical protein C22711_3131 [Escherichia coli O104:H4 str.
C227-11]
gi|345372996|gb|EGX04958.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_H.1.8]
gi|354858986|gb|EHF19435.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
C236-11]
gi|354862873|gb|EHF23310.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
C227-11]
gi|354863440|gb|EHF23873.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
04-8351]
gi|354871477|gb|EHF31875.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
09-7901]
gi|354878012|gb|EHF38370.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-3677]
gi|354886028|gb|EHF46319.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4404]
gi|354890235|gb|EHF50478.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4522]
gi|354893871|gb|EHF54069.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4623]
gi|354905178|gb|EHF65262.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354908844|gb|EHF68886.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354910727|gb|EHF70744.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354913428|gb|EHF73420.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354920829|gb|EHF80755.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|378125296|gb|EHW86697.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11A]
gi|378138461|gb|EHW99715.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11B]
gi|378144439|gb|EHX05611.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11D]
gi|378146550|gb|EHX07701.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11C]
gi|378155608|gb|EHX16667.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC11E]
gi|378161036|gb|EHX22021.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12B]
gi|378165254|gb|EHX26190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12A]
gi|378179061|gb|EHX39801.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12D]
gi|378183123|gb|EHX43769.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC12E]
gi|378233230|gb|EHX93320.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15A]
gi|378240816|gb|EHY00786.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15B]
gi|378243005|gb|EHY02952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15C]
gi|378251985|gb|EHY11880.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15D]
gi|378256455|gb|EHY16306.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC15E]
gi|383390933|gb|AFH15891.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli KO11FL]
gi|383407222|gb|AFH13465.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli W]
gi|386176172|gb|EIH53651.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.2608]
gi|386182873|gb|EIH65629.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 93.0624]
gi|386211357|gb|EII21822.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 9.0111]
gi|386220029|gb|EII36493.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 4.0967]
gi|388334728|gb|EIL01310.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H2 str. CVM9450]
gi|388404199|gb|EIL64687.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 541-1]
gi|406775440|gb|AFS54864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407052017|gb|AFS72068.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407067663|gb|AFS88710.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429356102|gb|EKY92784.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02030]
gi|429357040|gb|EKY93715.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429358731|gb|EKY95399.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02092]
gi|429371652|gb|EKZ08205.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02093]
gi|429373731|gb|EKZ10274.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02281]
gi|429376143|gb|EKZ12673.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02318]
gi|429389010|gb|EKZ25435.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-02913]
gi|429390567|gb|EKZ26978.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-03439]
gi|429391018|gb|EKZ27424.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-03943]
gi|429401447|gb|EKZ37749.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
11-04080]
gi|429402370|gb|EKZ38661.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429406310|gb|EKZ42570.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429413996|gb|EKZ50175.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429416454|gb|EKZ52610.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429424212|gb|EKZ60315.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429428593|gb|EKZ64669.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429432647|gb|EKZ68685.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429439716|gb|EKZ75697.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443880|gb|EKZ79827.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429448631|gb|EKZ84541.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429455104|gb|EKZ90962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458727|gb|EKZ94549.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431307028|gb|ELF95329.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE48]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVELVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|24379994|ref|NP_721949.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus mutans UA159]
gi|449865330|ref|ZP_21778920.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U2B]
gi|449871748|ref|ZP_21781249.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 8ID3]
gi|449877304|ref|ZP_21783200.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans S1B]
gi|449885637|ref|ZP_21785706.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SA41]
gi|449894277|ref|ZP_21789153.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF12]
gi|449902410|ref|ZP_21791559.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M230]
gi|449919896|ref|ZP_21798209.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 1SM1]
gi|449994628|ref|ZP_21822621.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans A9]
gi|450010789|ref|ZP_21828797.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans A19]
gi|450023902|ref|ZP_21830919.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U138]
gi|450036162|ref|ZP_21835379.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M21]
gi|450046312|ref|ZP_21838869.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N34]
gi|450050370|ref|ZP_21840238.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NFSM1]
gi|450076161|ref|ZP_21849726.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N3209]
gi|450083576|ref|ZP_21852992.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N66]
gi|450111532|ref|ZP_21862759.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM6]
gi|26006954|sp|P55045.4|FPG_STRMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|24377981|gb|AAN59255.1|AE014992_10 putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans
UA159]
gi|449155086|gb|EMB58618.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 8ID3]
gi|449159087|gb|EMB62466.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 1SM1]
gi|449185134|gb|EMB87036.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans A9]
gi|449189988|gb|EMB91601.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans A19]
gi|449192709|gb|EMB94117.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U138]
gi|449194548|gb|EMB95902.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M21]
gi|449199088|gb|EMC00172.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N34]
gi|449202723|gb|EMC03620.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NFSM1]
gi|449212958|gb|EMC13306.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N3209]
gi|449212980|gb|EMC13327.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans N66]
gi|449223779|gb|EMC23450.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM6]
gi|449251052|gb|EMC49083.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans S1B]
gi|449255048|gb|EMC52927.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SA41]
gi|449255404|gb|EMC53259.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF12]
gi|449262808|gb|EMC60249.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M230]
gi|449264317|gb|EMC61662.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U2B]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus B4]
gi|254789448|sp|C1B2Q5.1|FPG_RHOOB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226244474|dbj|BAH54822.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus opacus
B4]
Length = 289
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I I + + A+D + G+ I A R+G
Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIAGADRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVE 113
K LWL L+ PS GM+G + ++ E P+ K+ +
Sbjct: 61 KYLWLVLE----PSTVALVVHLGMSGQMLVQ--------------PPELPTEKHLRIRAR 102
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LD GL+L F D+R F L D + VP ++ + D L + + K
Sbjct: 103 LDSGLDLRFVDQRTFGGWALAPLVEVDGSLVPDSVAHIARDPLDSRFDLAATVKVVRGKH 162
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
IK +LLDQ+ +SGIGN ADE L++A+IH + L+ +L ++V REAL
Sbjct: 163 SEIKRVLLDQTVVSGIGNIYADEALWRAQIHGNRLTDRLTGPRIGAVLTAAQQVMREAL 221
>gi|221310849|ref|ZP_03592696.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315175|ref|ZP_03596980.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320092|ref|ZP_03601386.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324374|ref|ZP_03605668.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767671|ref|NP_390786.2| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402777063|ref|YP_006631007.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis QB928]
gi|452915009|ref|ZP_21963635.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis MB73/2]
gi|7531268|sp|O34403.4|FPG_BACSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|225185299|emb|CAB14868.2| formamidopyrimidine-DNA glycosidase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402482243|gb|AFQ58752.1| Formamidopyrimidine-DNA glycosidase [Bacillus subtilis QB928]
gi|407965746|dbj|BAM58985.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis BEST7003]
gi|452115357|gb|EME05753.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis MB73/2]
Length = 276
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 107/239 (44%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T D L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK----EVREALGVSLQFY 233
+ G+GN DE L++A +HP A LS ++ TL IK E +A G +++ Y
Sbjct: 167 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSY 225
>gi|148544470|ref|YP_001271840.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri DSM
20016]
gi|184153835|ref|YP_001842176.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM
1112]
gi|227363102|ref|ZP_03847237.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus reuteri MM2-3]
gi|325682792|ref|ZP_08162308.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A]
gi|148531504|gb|ABQ83503.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus reuteri
DSM 20016]
gi|183225179|dbj|BAG25696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM
1112]
gi|227071820|gb|EEI10108.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus reuteri MM2-3]
gi|324977142|gb|EGC14093.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A]
Length = 276
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + +KI + + + V DF +++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVE--DFRQALIGQTIENIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L R + M G Y + + P K++ E DG E
Sbjct: 59 YLLFRFTNDLTMISHLRMEGRYYNQPIG--------------GPIDKHTHVVFEFTDGTE 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L+ D +V + +GP+ + T+ FT L K + IK LL+
Sbjct: 105 LCYQDTRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLN 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLK-CIKEVREAL 226
Q +++G+GN DEVL+ I+P Q A +L+ A L + IKE+ A+
Sbjct: 165 QRHVAGLGNIYVDEVLWMTGINPEQPANTLTANQIAELRENIIKELATAI 214
>gi|438118341|ref|ZP_20871318.1| formamidopyrimidine-DNA glycosylase [Spiroplasma melliferum IPMB4A]
gi|434155768|gb|ELL44686.1| formamidopyrimidine-DNA glycosylase [Spiroplasma melliferum IPMB4A]
Length = 277
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 15/224 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H +GK I I + + + + +F ++ + I R GK
Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L LD S M G Y ++ + EW ++ ELD +L
Sbjct: 61 HLLFILDDYVLIS-HLRMEGKYYF----------TSKDEPGEW--QHIMVLFELDHQFQL 107
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ND P+++LG + E +TV ++ K IK LL+Q
Sbjct: 108 RYHDTRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNAWQNKSQPIKTTLLEQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ I GIGN A+E+L+ +KIHP + +L + +++ K V
Sbjct: 168 NVIVGIGNIYANEILFASKIHPGERTKNLVDQDYQNIIENTKLV 211
>gi|421075530|ref|ZP_15536543.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans JBW45]
gi|392526528|gb|EIW49641.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans JBW45]
Length = 274
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS--IIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPE+PEVE RR++ + G+ IV+ ++A +++ S+++F+A + + I + R+
Sbjct: 1 MPEMPEVEIIRRSLIDKISGRTIVEVEFLLA---RLVKWPSSAEFQAVLTNRKIETVARR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LD MTG + QY R KD K+++ +LD+G
Sbjct: 58 GKYLLFHLDDKQVLVIHLRMTGRL--------QYITRDGEKD------KFTRIIFKLDNG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R + L+ ++ + + +GP+ L ++ T+ L K IKA+L
Sbjct: 104 DLLVYADTRTLGTLYLMPFDELWRIAGLFTMGPEPLTPEFSLVYLTEMLKKHHGKIKAIL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV----REALGVSLQ 231
L+Q YI G+GN DE + A IHP + A SLS+ L I +V E G + +
Sbjct: 164 LNQKYIGGLGNIYVDECMAIAGIHPERIASSLSENENEKLYHAINKVIADGIEHGGTTFR 223
Query: 232 FYKCYFAKPYVHKKH 246
Y+ K H+ H
Sbjct: 224 DYRDGDGKSGSHQYH 238
>gi|422836157|ref|ZP_16884206.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E101]
gi|371609718|gb|EHN98252.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E101]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L + GM+G++ I ++E+P K+ + + +G
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRIL--------------SEEFPPEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|227513545|ref|ZP_03943594.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri
ATCC 11577]
gi|227083418|gb|EEI18730.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri
ATCC 11577]
Length = 280
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 29/256 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK---DTDEWP-SKYSKFFVELDD 116
L++R+++ G+ + + R K + + P SK++ L D
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGKYDVEPEGTPLSKHTHIVFHLTD 101
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 102 GRQLRYNDTRKFGRINLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPF 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSL 230
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I E++ A+ G ++
Sbjct: 162 LLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVVELKLLRKSIIDEIKRAIDGHGTTV 221
Query: 231 QFYKCYFAKPYVHKKH 246
Y + + + H
Sbjct: 222 HSYSNAYGEAGNFQNH 237
>gi|238855719|ref|ZP_04646015.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3]
gi|260665505|ref|ZP_05866352.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii
SJ-7A-US]
gi|238831665|gb|EEQ24006.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3]
gi|260560773|gb|EEX26750.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii
SJ-7A-US]
Length = 275
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R+ + E +GK I K+ + N +I + F + K I+ R K
Sbjct: 1 MPEMPEVETVRKTLTELVLGKTIEKAKVWYPNIIIG--DSESFCNQLKKKKIIKIDRYAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M G R A ++ + +F DG L
Sbjct: 59 FLLFRLSDNITIVSHLRMEGKY-----------RLATPHEEKNKHDHVEFI--FTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I +LGP+AL E T+ F +L KK IKA+LLDQ
Sbjct: 106 RYNDVRKFGRMQLVETGTEKQKTGIKKLGPEALSEGFTLSYFQRALRNKKKNIKAVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +SG+GN ADE L+ +KI+P + SLS + +L K I +V
Sbjct: 166 NVVSGLGNIYADETLWLSKINPERPGNSLSCDEITSLYKAINQV 209
>gi|145593839|ref|YP_001158136.1| formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440]
gi|189044675|sp|A4X4F8.1|FPG_SALTO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145303176|gb|ABP53758.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Salinispora tropica CNB-440]
Length = 287
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 17/245 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKA-ILSAHRKG 59
MPELPEVE R+ + + ++I + + V + + A VL + + R+G
Sbjct: 1 MPELPEVETVRQGLAQWVTDRRIAEVQVLHPRAVRRHAAGAAHFADVLRETTVRDVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ A V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVVGHLGMSGQLLLQPAAAPDETHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D L + F +L +++ IK LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSAGGAELPTEIAHIARDPLDPEFSDATFVAALRRRRTEIKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQFYKCYFA 238
+ +SG+GN ADE L++A++H + L+ + +L+ + VR+ LG +++ F
Sbjct: 169 TLLSGVGNIYADEALWRARLHGTRPTDGLTGPA---VLRLLGHVRDVLGEAVKEGGTSFD 225
Query: 239 KPYVH 243
YV+
Sbjct: 226 ALYVN 230
>gi|423070300|ref|ZP_17059076.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
F0413]
gi|355366621|gb|EHG14339.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
F0413]
Length = 274
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLARQLKK 195
>gi|350559985|ref|ZP_08928825.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782253|gb|EGZ36536.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 271
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H G++I + I+ + + D + G + R+ K
Sbjct: 1 MPELPEVETTRSGLEPHLQGRRIQQLIVREPR--LRWPVPPDLAKLLSGGQVRRLDRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GM+G++ R DT P + F LDDG E+
Sbjct: 59 YLLLGTDGPGV-LLHLGMSGSL-----------RRCAADTPLRPHDHLIF--RLDDGFEV 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
D RRF L DP P+ + LGP+ L + D + LS+ ++ +KA ++DQ
Sbjct: 105 RLHDPRRFGCCLPLPDPPQHHPLLAGLGPEPLGDEFDGD-YLHCLSRGRRAPVKAFIMDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A I P + A LS+ C L I+ V
Sbjct: 164 QVVVGVGNIYASEALFLAGIRPGRAAGRLSRAHCRALATSIRTV 207
>gi|345849800|ref|ZP_08802807.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces zinciresistens K42]
gi|345638781|gb|EGX60281.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces zinciresistens K42]
Length = 286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 26/251 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHLTGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDD- 116
K LWL L D+ GM+G + ++ E P+ K+ + V D
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLLVQ--------------PHEAPAEKHLRVRVRFADD 106
Query: 117 -GLELSFTDKRRFAKVRLLND-PTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIK 172
G EL F D+R F + L + P +P I+ + D L +P+ DE F +L +++ T+K
Sbjct: 107 LGTELRFVDQRTFGGLSLHDTTPGGLPDVIAHIARDPL-DPLFDDELFVQALRRRRTTVK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVSLQF 232
LLDQS ISG+GN ADE L++A++H + +L++ +L+ + R+ + +L
Sbjct: 166 RALLDQSLISGVGNIYADEALWRARLHYDRPTPALTRPR---VLELLGHARDVMNAALSV 222
Query: 233 YKCYFAKPYVH 243
F YV+
Sbjct: 223 GGTSFDSLYVN 233
>gi|325570070|ref|ZP_08145995.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus
ATCC 12755]
gi|325156898|gb|EGC69069.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus
ATCC 12755]
Length = 280
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G +YK ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG----KYKYF---ESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QAKIHP Q A SL L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAKIHPEQPADSLMPTEVDVLHEAIIDVLERSVEAGGTTIRTY 224
>gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
7]
gi|384165376|ref|YP_005546755.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
LL3]
gi|384169518|ref|YP_005550896.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
XH7]
gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
7]
gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
LL3]
gi|341828797|gb|AEK90048.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
XH7]
Length = 278
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFNMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-VREALGVSLQFYKCYF 237
+ G+GN DE L++A IHP A SLS L IK+ ++EA+ + Y
Sbjct: 169 KAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAIDAGGSTVRSYI 228
>gi|227510536|ref|ZP_03940585.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190188|gb|EEI70255.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 280
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 29/256 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK---DTDEWP-SKYSKFFVELDD 116
L++R+++ G+ + + R K + + P SK++ L D
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGKYDVEPEGTPLSKHTHIVFHLTD 101
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 102 GRQLRYNDTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPF 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSL 230
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I E+++A+ G ++
Sbjct: 162 LLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVAELKLLRKSIIDEIKKAIDGHGTTV 221
Query: 231 QFYKCYFAKPYVHKKH 246
Y + + + H
Sbjct: 222 HSYSNAYGEAGNFQNH 237
>gi|384919043|ref|ZP_10019105.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. 357]
gi|384467126|gb|EIE51609.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. 357]
Length = 283
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + G +I + + N+ D A L G I R+
Sbjct: 1 MPELPEVETVRRGLAPVMEGARIRHAQV---NRPDLRWPFPDRMAERLTGARIERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + LDS GMTG + + G A+ Q+ V D P K+ ++ DG
Sbjct: 58 KYILADLDSGETLLVHLGMTGRMLVSGDALGQF----VHD-HPAPEKHDHVVFDMQDGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ T S P ++ LGP+ L + +L + + +K+ LLD
Sbjct: 113 VTFNDPRRFGAMDLMRTATADSHPLLTALGPEPLGNGFHESQLLAALKGRSMPVKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFY 233
Q ++G+GN E LY+A +HP + ++++ ATL+ ++ V + A G SL+ +
Sbjct: 173 QKIVAGLGNIYVCEALYRAGLHPQRRVNKIAEKRIATLVPIVRAVLQDAIAAGGSSLRDF 232
Query: 234 K------CYFAKPYVHKKHRENKICR 253
+ YF + RE + CR
Sbjct: 233 RQADGKLGYFQHSF-DVYGREGQPCR 257
>gi|422809645|ref|ZP_16858056.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-208]
gi|378753259|gb|EHY63844.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-208]
Length = 273
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEGKFRLM-------------DEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFAAGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVSLQFYKCY 236
++G+GN ADE+ ++AK+ P + A SLS + + + K + EA+ + + Y
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKRIMTEAVALGGSTVRTY 224
>gi|408529025|emb|CCK27199.1| Formamidopyrimidine-DNA glycosylase [Streptomyces davawensis JCM
4913]
Length = 286
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 23/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G I R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHIAGADDFTHRLKGHRIGVPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDD- 116
K LWL L D+ GM+G + ++ E P+ K+ + V D
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLLVQ--------------PHEAPAEKHLRIRVRFADD 106
Query: 117 -GLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIK 172
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 107 LGTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++ ++H + + + LL +++V A
Sbjct: 166 RALLDQSLISGVGNIYADEALWRTRLHYDRPTATFIRPRSLELLGHVRDVMNA 218
>gi|304389334|ref|ZP_07371299.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327452|gb|EFL94685.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 321
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 125/277 (45%), Gaps = 39/277 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--SDFEASVLGKAILSAHRK 58
MPELPEVE RR +E+ +G +++ + + + + A ++G + +A R+
Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60
Query: 59 GKNLWLRL--DSP----PFP-SFQFGMTGAIYIKGVAVTQYKRSAV----------KDTD 101
GK LW L D+P P GM+G + ++ T +++ A ++T
Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120
Query: 102 EWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEF 160
P + + + LD+G +L F D+R F V L PT+ +G L P ++
Sbjct: 121 LLP--HERVRITLDNGKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGMEHI 178
Query: 161 -----------TDSLSKKKITIKAL---LLDQSYISGIGNWVADEVLYQAKIHPLQTAVS 206
TD + K + +A+ LLDQ +SGIGN ADE L+ A+IHP S
Sbjct: 179 ARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAPGRS 238
Query: 207 LSKESCATLLKCIKEVREALGVSLQFYKCYFAKPYVH 243
LS LL + V E +L F F + YV+
Sbjct: 239 LSDRKLRKLLGAVAAVMEQ---ALVFGGTSFDRLYVN 272
>gi|444432140|ref|ZP_21227299.1| formamidopyrimidine-DNA glycosylase [Gordonia soli NBRC 108243]
gi|443886969|dbj|GAC69020.1| formamidopyrimidine-DNA glycosylase [Gordonia soli NBRC 108243]
Length = 296
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 103/250 (41%), Gaps = 27/250 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G+ I + V D + GK I R+G
Sbjct: 1 MPELPEVETVRHGLATHIVGRTITGVDVLHPRAVRRHEGGPVDLVGRLRGKEITGVRRRG 60
Query: 60 KNLWL----RLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
K LWL R D+ P GM+G + I + + + LD
Sbjct: 61 KYLWLDTGDRDDTAPV-VVHLGMSGQMLIATAGAPDHT-------------HLRIRAGLD 106
Query: 116 DGLELSFTDKRRFAKVRL---LNDPTSVP----PISELGPDALLEPMTVDEFTDSLSKKK 168
DG EL F D+R F + +DP P I + PD + + K
Sbjct: 107 DGNELRFVDQRTFGGWHVDEYADDPAGGPDLPASIVHIAPDPFDDSFDRAAVVARMRTKH 166
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALG 227
IK +LLDQ+ ISG+GN ADE L++A++H + A ++S L+ V R AL
Sbjct: 167 SEIKRVLLDQTVISGVGNIYADEALWRARLHGTRVAENISARKLGELIDAASAVMRSALD 226
Query: 228 VSLQFYKCYF 237
V + +
Sbjct: 227 VGGTSFDALY 236
>gi|424787815|ref|ZP_18214579.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius BA1]
gi|422113569|gb|EKU17307.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius BA1]
Length = 274
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ ++LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVCVPKMVKTGVE--DFQLNILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F L+ G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLNGGSI 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLTKSHKAIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|400178628|gb|AFP72860.1| DNA glycosylase/AP lyase, partial [uncultured bacterium]
Length = 215
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 121/228 (53%), Gaps = 20/228 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
M ELPE+E R+ + + K++ ++ A + DG +D A++ GKAI HR
Sbjct: 1 MAELPEIELLRQKLRRSILHKRVGVMQMQNAKGEPLTDGAGMAD--AALQGKAITDLHRY 58
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
G+ L+L LD + Q G G + +R SA + E P + ++++
Sbjct: 59 GQYLFLELDRKDILAMQLG--------GELSGELERGSAQAEGGEEPR--AALEIQINGQ 108
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALL---EPMTVDEFTDSLSKKKITIKAL 174
L F + ++RLL++ + V +++LGPD L+ E + V ++LS+++ ++ +
Sbjct: 109 QRLRFQGTQLGNRLRLLDENSDVDFLTKLGPDPLMVHGEGLGV--LREALSRRRSALRNI 166
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLD ++ GIG ADE+L+QA++ P +TA SLS+E L+ I +V
Sbjct: 167 LLDDTFAPGIGGIWADEILFQARLRPDRTATSLSEEERERFLEQIPKV 214
>gi|16131506|ref|NP_418092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K-12 substr. MG1655]
gi|157163116|ref|YP_001460434.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS]
gi|170083143|ref|YP_001732463.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. K-12
substr. DH10B]
gi|194435950|ref|ZP_03068053.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1]
gi|238902726|ref|YP_002928522.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BW2952]
gi|251786886|ref|YP_003001190.1| formamidopyrimidine DNA glycosylase [Escherichia coli BL21(DE3)]
gi|253771524|ref|YP_003034355.1| formamidopyrimidine-DNA glycosylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163563|ref|YP_003046671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str.
REL606]
gi|254290313|ref|YP_003056061.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BL21(DE3)]
gi|300923419|ref|ZP_07139460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1]
gi|300927935|ref|ZP_07143494.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1]
gi|301325317|ref|ZP_07218824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1]
gi|332282595|ref|ZP_08395008.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9]
gi|386593657|ref|YP_006090057.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1]
gi|387623293|ref|YP_006130921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1]
gi|388479604|ref|YP_491798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K-12 substr. W3110]
gi|417228191|ref|ZP_12029949.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 5.0959]
gi|417945598|ref|ZP_12588829.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli XH140A]
gi|417976421|ref|ZP_12617214.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli XH001]
gi|418955957|ref|ZP_13507890.1| formamidopyrimidine-DNA glycosylase [Escherichia coli J53]
gi|419810698|ref|ZP_14335577.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O32:H37 str. P4]
gi|422788480|ref|ZP_16841216.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H489]
gi|422792226|ref|ZP_16844927.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA007]
gi|422961931|ref|ZP_16972667.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H494]
gi|425307439|ref|ZP_18697108.1| formamidopyrimidine-DNA glycosylase [Escherichia coli N1]
gi|432419169|ref|ZP_19661760.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE44]
gi|432577901|ref|ZP_19814347.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE56]
gi|432629270|ref|ZP_19865235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE77]
gi|432752096|ref|ZP_19986672.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE29]
gi|432878002|ref|ZP_20095451.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE154]
gi|442600202|ref|ZP_21017894.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|450225347|ref|ZP_21897345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O08]
gi|450252527|ref|ZP_21902113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S17]
gi|120475|sp|P05523.3|FPG_ECOLI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166988460|sp|A8A697.1|FPG_ECOHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|229541070|sp|B1X969.1|FPG_ECODH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|259647332|sp|C4ZXM7.1|FPG_ECOBW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|41481|emb|CAA29431.1| unnamed protein product [Escherichia coli]
gi|466773|gb|AAB18612.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. K-12
substr. MG1655]
gi|1790066|gb|AAC76659.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K-12 substr. MG1655]
gi|85676407|dbj|BAE77657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K12 substr. W3110]
gi|157068796|gb|ABV08051.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS]
gi|169890978|gb|ACB04685.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K-12 substr. DH10B]
gi|194425493|gb|EDX41477.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1]
gi|238861125|gb|ACR63123.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli BW2952]
gi|242379159|emb|CAQ33961.1| formamidopyrimidine DNA glycosylase [Escherichia coli BL21(DE3)]
gi|253322568|gb|ACT27170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975464|gb|ACT41135.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str.
REL606]
gi|253979620|gb|ACT45290.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BL21(DE3)]
gi|260447346|gb|ACX37768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1]
gi|300420329|gb|EFK03640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1]
gi|300464027|gb|EFK27520.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1]
gi|300847844|gb|EFK75604.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1]
gi|315138217|dbj|BAJ45376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1]
gi|323959883|gb|EGB55531.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H489]
gi|323971277|gb|EGB66522.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA007]
gi|332104947|gb|EGJ08293.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9]
gi|342362669|gb|EGU26785.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli XH140A]
gi|344193844|gb|EGV47921.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli XH001]
gi|359333781|dbj|BAL40228.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli str. K-12 substr. MDS42]
gi|371592673|gb|EHN81570.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H494]
gi|384381348|gb|EIE39207.1| formamidopyrimidine-DNA glycosylase [Escherichia coli J53]
gi|385156333|gb|EIF18330.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O32:H37 str. P4]
gi|386207526|gb|EII12031.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 5.0959]
gi|408225304|gb|EKI48987.1| formamidopyrimidine-DNA glycosylase [Escherichia coli N1]
gi|430936225|gb|ELC56508.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE44]
gi|431111868|gb|ELE15758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE56]
gi|431160206|gb|ELE60721.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE77]
gi|431293026|gb|ELF83406.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE29]
gi|431417242|gb|ELG99705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE154]
gi|441650916|emb|CCQ03362.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|449313894|gb|EMD04080.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O08]
gi|449314602|gb|EMD04765.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S17]
Length = 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|423142208|ref|ZP_17129846.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050137|gb|EHY68030.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPILSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|144898444|emb|CAM75308.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 314
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK--SIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R + G + ++ + D K + +DF A + G+ + S R+
Sbjct: 37 MPELPEVETVARGLAAVWPGHRFIRVEARRPDLRKPL----PADFAARLTGRRVESVGRR 92
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K L + LD GM+GA+ I K +E P + DDG
Sbjct: 93 AKYLLVHLDDGLTLLGHLGMSGAMVIS------------KGRNEPPGPHDHVEFVSDDGT 140
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+++ D RRF + L DP++ P ++ LGP+ L +L K +IKA LLDQ
Sbjct: 141 MVTYRDPRRFGLMDLTLDPSTHPLLAHLGPEPLGPDFHEKALAQTLDGKGASIKAALLDQ 200
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
+ ++G+GN E L+ + I P + A SL L+ I+ V E
Sbjct: 201 NVVAGLGNIYVSESLFLSGIDPTRAAGSLKPREINKLVPAIRAVLE 246
>gi|374705302|ref|ZP_09712172.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas sp. S9]
Length = 270
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE E RR I H +G++I + I+ D + + D + V G+ + + R+ K
Sbjct: 1 MPELPEGETTRRGIAPHLVGQRISRVIVRD--RRLRWPIPEDLDIVVSGQRVEAVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++L++ S GM+G + + K+ +EL+ G+ L
Sbjct: 59 YLLIKLETGSLIS-HLGMSGNLRLVPCGSPA-------------GKHEHVDIELESGMAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P +S+LGP+ L E + + + + + +K ++D +
Sbjct: 105 RYTDPRRFGALLWSQAPLEHVLLSKLGPEPLTEAFSGERLYEKSRGRSMAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A I P + A S+SK A L IK +
Sbjct: 165 VVGVGNIYATEALFAAGIDPRREAGSISKARYAKLALEIKRI 206
>gi|392428810|ref|YP_006469821.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
JTH08]
gi|419776573|ref|ZP_14302495.1| DNA-formamidopyrimidine glycosylase [Streptococcus intermedius
SK54]
gi|383845984|gb|EID83384.1| DNA-formamidopyrimidine glycosylase [Streptococcus intermedius
SK54]
gi|391757956|dbj|BAM23573.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
JTH08]
Length = 274
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ ++LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVCVPKMVKTGVE--DFQLNILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K F L+ G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKRFHLFFGLNGGSI 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLTKSHKAIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P Q A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPEQLASRLKK 195
>gi|383649280|ref|ZP_09959686.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces chartreusis NRRL 12338]
Length = 283
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 24/232 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
K LWL L D+ GM+G + ++ DE K+ + V +D
Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPQTAP----------DE---KHLRIRVRFNDSP 107
Query: 118 -LELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L + DE F +L +K+ TIK
Sbjct: 108 DTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLFD----DEAFHQALRRKRSTIKR 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A+IH + + ++ LL +++V A
Sbjct: 164 ALLDQSLISGVGNIYADEALWRARIHYERPIATFTRPRTLLLLGHVRDVMNA 215
>gi|405980875|ref|ZP_11039204.1| formamidopyrimidine-DNA glycosylase [Actinomyces neuii BVS029A5]
gi|404392894|gb|EJZ87951.1| formamidopyrimidine-DNA glycosylase [Actinomyces neuii BVS029A5]
Length = 300
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE R + EH I + I V E S+ G+AIL +G
Sbjct: 1 MPELPEVEVVRAGLAEHTSNFLIEDAAIRHPRTARHTVGGPQALERSLRGRAILGWAVRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LD GM+G + V+ +D PSK+ + + G
Sbjct: 61 KYLWALLDDDTALVVHLGMSGQML-------------VRPSDAPPSKHERATLT-SGGRS 106
Query: 120 LSFTDKRRFAKVR---LLNDPTSVPP------------ISELGPDALLEPMTVDEFTDSL 164
L F D+R F +R L+ D VP +S +G D L + + +
Sbjct: 107 LRFVDQRTFGYLRADQLVGDRAGVPAGRGDADGRLPACVSHVGRDVLDPHLDMASVCRQV 166
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
+KA+LLDQ+ +SG+GN ADE L+ A++HPL+ LSK
Sbjct: 167 QSSARAVKAILLDQTVVSGVGNIYADEALWAAQVHPLRRGNELSK 211
>gi|420147908|ref|ZP_14655182.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri CECT
5714]
gi|398400576|gb|EJN54123.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri CECT
5714]
Length = 276
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K I +++ ++F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVN--DPAEFVKKLTNKRILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G ++ DT + ++ +F DG L
Sbjct: 59 YLLFRFNDDLTMVSHLRMEGKYHL-----------VSPDTPKGKHEHVEFI--FTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ + F D+LS+KK IK LLDQ
Sbjct: 106 RYDDVRKFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+++KIHPL +A ++ + L + I
Sbjct: 166 TIVCGLGNIYVDEVLWKSKIHPLSSAKAIPADKVKNLYQNINHT 209
>gi|146423146|ref|XP_001487505.1| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC
6260]
Length = 386
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 111/269 (41%), Gaps = 83/269 (30%)
Query: 46 SVLGKAILSAHRKGKNLWLRLDSPPFPSF----------QFGMTGAIYIKG--------- 86
++LG I S R GK W+RL+ P FGMTG I ++
Sbjct: 4 TLLGSRIDSVGRHGKYFWMRLNLANGPDLAKAPSGVLLMHFGMTGMIKLRNIDSHLTFME 63
Query: 87 ------------VAVTQYKRSAV------------KDTDEWPSKYSKFFVELD----DGL 118
VAV Q V +EWP K+ KF ++L+ + +
Sbjct: 64 NGGDKKVLEKMKVAVKQETTETVTVPKDDKDTKDDVKDEEWPPKFVKFEMDLERENGEVI 123
Query: 119 ELSFTDKRRFAKVRLLNDPT--------SVPPISELGPD--ALLEPMTVD---------- 158
EL+F D RR +VRLL T P+ LGPD L E T D
Sbjct: 124 ELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKLAEGKTTDKFVYGDPDPH 183
Query: 159 ----------EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
EF D + KK IK++LL+Q SG+GNWVADE++Y A++HP +S
Sbjct: 184 HHGRPRLLLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHP-NEVISSK 242
Query: 209 KESCATLLKCIKEVREALGVSLQFYKCYF 237
+ + + IKE+ AL Y C +
Sbjct: 243 ISNDGNVSQVIKELYNAL-----IYVCEY 266
>gi|365904282|ref|ZP_09442041.1| formamidopyrimidine-DNA glycosylase [Lactobacillus versmoldensis
KCTC 3814]
Length = 275
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + + GK+I I N + V+ +F +V I R+ K
Sbjct: 1 MPEMPEVETVRRGLIDQVKGKRITDIEIRYQNLITGDVN--EFVETVKNSVIEDIGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSA-VKDTDEWPSKYSKFFVELDDGLE 119
L + LD+ M G +YK S+ V D K+S LDDG
Sbjct: 59 FLLIHLDNGYTIISHLRMEG----------KYKVSSDVNAID----KHSHAIFSLDDGQM 104
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F +++L PT + +LGP+ L + T + + K + IK +L
Sbjct: 105 LIYNDVRKFGRMQLW--PTDRLFENKSLKKLGPEPLSDEFTFENIKPRVIKHRKDIKTVL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK-EVREALGVSLQFYK 234
LDQS +SG+GN DEVL+QAKIHP A L+ E ++K E+R A+ +
Sbjct: 163 LDQSVMSGLGNIYVDEVLWQAKIHPETPANHLTDEDIKIIIKHANDEIRLAIQSGGSTVR 222
Query: 235 CYF 237
Y
Sbjct: 223 SYL 225
>gi|15804176|ref|NP_290215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EDL933]
gi|15833764|ref|NP_312537.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
Sakai]
gi|30065089|ref|NP_839260.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str.
2457T]
gi|56480390|ref|NP_709414.2| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Shigella flexneri 2a str. 301]
gi|74314131|ref|YP_312550.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei Ss046]
gi|82545998|ref|YP_409945.1| formamidopyrimidine-DNA glycosylase [Shigella boydii Sb227]
gi|91213151|ref|YP_543137.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UTI89]
gi|110807687|ref|YP_691207.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5 str. 8401]
gi|117625909|ref|YP_859232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1]
gi|157158292|ref|YP_001465115.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A]
gi|168748717|ref|ZP_02773739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4113]
gi|168753459|ref|ZP_02778466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4401]
gi|168759732|ref|ZP_02784739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4501]
gi|168766055|ref|ZP_02791062.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4486]
gi|168772399|ref|ZP_02797406.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4196]
gi|168779790|ref|ZP_02804797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4076]
gi|168785511|ref|ZP_02810518.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC869]
gi|170018135|ref|YP_001723089.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739]
gi|170684053|ref|YP_001745935.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5]
gi|187731323|ref|YP_001882332.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94]
gi|188491930|ref|ZP_02999200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638]
gi|191167823|ref|ZP_03029629.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A]
gi|191170358|ref|ZP_03031911.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11]
gi|194430989|ref|ZP_03063282.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012]
gi|195936196|ref|ZP_03081578.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4024]
gi|208814029|ref|ZP_03255358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4045]
gi|208820753|ref|ZP_03261073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4042]
gi|209398868|ref|YP_002273113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4115]
gi|209921106|ref|YP_002295190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SE11]
gi|215488914|ref|YP_002331345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O127:H6 str.
E2348/69]
gi|217324519|ref|ZP_03440603.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
TW14588]
gi|218551163|ref|YP_002384954.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ATCC
35469]
gi|218556197|ref|YP_002389110.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI1]
gi|218560707|ref|YP_002393620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S88]
gi|218691919|ref|YP_002400131.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ED1a]
gi|218707269|ref|YP_002414788.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMN026]
gi|237703405|ref|ZP_04533886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA]
gi|254795590|ref|YP_003080427.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
TW14359]
gi|260857970|ref|YP_003231861.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O26:H11 str.
11368]
gi|260870365|ref|YP_003236767.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H- str. 11128]
gi|261224182|ref|ZP_05938463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. FRIK2000]
gi|261254793|ref|ZP_05947326.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. FRIK966]
gi|291285006|ref|YP_003501824.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
(DNA-(apurinic or apyrimidinic site) lyase mutM)
[Escherichia coli O55:H7 str. CB9615]
gi|293407258|ref|ZP_06651182.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412]
gi|293413069|ref|ZP_06655737.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354]
gi|293417096|ref|ZP_06659723.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185]
gi|298383004|ref|ZP_06992599.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302]
gi|300815126|ref|ZP_07095351.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1]
gi|300822405|ref|ZP_07102545.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7]
gi|300898569|ref|ZP_07116900.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1]
gi|300907676|ref|ZP_07125304.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1]
gi|300919798|ref|ZP_07136273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1]
gi|300983558|ref|ZP_07176650.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1]
gi|301303868|ref|ZP_07209987.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1]
gi|306816017|ref|ZP_07450155.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101]
gi|309797624|ref|ZP_07692012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7]
gi|312968024|ref|ZP_07782235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75]
gi|331649450|ref|ZP_08350536.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605]
gi|331670475|ref|ZP_08371314.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271]
gi|331679726|ref|ZP_08380396.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591]
gi|383180848|ref|YP_005458853.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Shigella sonnei 53G]
gi|384545211|ref|YP_005729275.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri 2002017]
gi|386601668|ref|YP_006103174.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IHE3034]
gi|386606224|ref|YP_006112524.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UM146]
gi|386616434|ref|YP_006136100.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNK88]
gi|386621314|ref|YP_006140894.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli NA114]
gi|386706903|ref|YP_006170750.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli P12b]
gi|387509041|ref|YP_006161297.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. RM12579]
gi|387609368|ref|YP_006098224.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 042]
gi|387614301|ref|YP_006117417.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ETEC H10407]
gi|387831524|ref|YP_003351461.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE15]
gi|387884811|ref|YP_006315113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli Xuzhou21]
gi|404377030|ref|ZP_10982172.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43]
gi|414578477|ref|ZP_11435643.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 3233-85]
gi|415785772|ref|ZP_11493123.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa14]
gi|415819636|ref|ZP_11508969.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OK1180]
gi|415847847|ref|ZP_11525961.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 53G]
gi|415858449|ref|ZP_11532964.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str.
2457T]
gi|415865567|ref|ZP_11538380.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 85-1]
gi|415873307|ref|ZP_11540562.1| DNA-formamidopyrimidine glycosylase [Escherichia coli MS 79-10]
gi|416264305|ref|ZP_11640987.1| Formamidopyrimidine-DNA glycosylase [Shigella dysenteriae CDC
74-1112]
gi|416284334|ref|ZP_11647180.1| Formamidopyrimidine-DNA glycosylase [Shigella boydii ATCC 9905]
gi|416293855|ref|ZP_11650569.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri CDC 796-83]
gi|416315705|ref|ZP_11659518.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
1044]
gi|416319958|ref|ZP_11662510.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC1212]
gi|416330175|ref|ZP_11669212.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
1125]
gi|416338188|ref|ZP_11674422.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli WV_060327]
gi|416342089|ref|ZP_11676455.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli EC4100B]
gi|416778366|ref|ZP_11875867.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. G5101]
gi|416789664|ref|ZP_11880712.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H- str. 493-89]
gi|416801551|ref|ZP_11885652.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H- str. H 2687]
gi|416812406|ref|ZP_11890570.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. 3256-97]
gi|416822680|ref|ZP_11895084.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. USDA 5905]
gi|416833110|ref|ZP_11900182.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. LSU-61]
gi|417087523|ref|ZP_11954451.1| formamidopyrimidine-DNA glycosylase [Escherichia coli cloneA_i1]
gi|417127259|ref|ZP_11974750.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 97.0246]
gi|417133417|ref|ZP_11978202.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 5.0588]
gi|417157934|ref|ZP_11995558.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 96.0497]
gi|417202113|ref|ZP_12018363.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 4.0522]
gi|417223489|ref|ZP_12026929.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 96.154]
gi|417267986|ref|ZP_12055347.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.3884]
gi|417284917|ref|ZP_12072208.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TW07793]
gi|417295741|ref|ZP_12082988.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 900105 (10e)]
gi|417583257|ref|ZP_12234056.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_B2F1]
gi|417588772|ref|ZP_12239534.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_C165-02]
gi|417594067|ref|ZP_12244753.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2534-86]
gi|417604535|ref|ZP_12255098.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_94C]
gi|417610328|ref|ZP_12260821.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_DG131-3]
gi|417631075|ref|ZP_12281309.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_MHI813]
gi|417641554|ref|ZP_12291680.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TX1999]
gi|417664224|ref|ZP_12313804.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AA86]
gi|417675115|ref|ZP_12324540.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 155-74]
gi|417684321|ref|ZP_12333661.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 3594-74]
gi|417692013|ref|ZP_12341218.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 5216-82]
gi|417714881|ref|ZP_12363830.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-272]
gi|417719824|ref|ZP_12368701.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-227]
gi|417730834|ref|ZP_12379515.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-671]
gi|417735973|ref|ZP_12384608.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2747-71]
gi|417740555|ref|ZP_12389121.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 4343-70]
gi|417745764|ref|ZP_12394281.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2930-71]
gi|417757994|ref|ZP_12406058.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2B]
gi|418040469|ref|ZP_12678712.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W26]
gi|418259835|ref|ZP_12882482.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 6603-63]
gi|418269321|ref|ZP_12887800.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei str. Moseley]
gi|418945143|ref|ZP_13498060.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H43 str. T22]
gi|418999040|ref|ZP_13546621.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1A]
gi|419004368|ref|ZP_13551878.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1B]
gi|419010045|ref|ZP_13557460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1C]
gi|419015686|ref|ZP_13563022.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1D]
gi|419020679|ref|ZP_13567976.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1E]
gi|419026141|ref|ZP_13573356.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2A]
gi|419036932|ref|ZP_13584005.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2D]
gi|419041974|ref|ZP_13588991.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2E]
gi|419047696|ref|ZP_13594627.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3A]
gi|419053449|ref|ZP_13600315.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3B]
gi|419059400|ref|ZP_13606200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3C]
gi|419064948|ref|ZP_13611667.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3D]
gi|419071882|ref|ZP_13617487.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3E]
gi|419077718|ref|ZP_13623218.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3F]
gi|419082880|ref|ZP_13628323.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4A]
gi|419088754|ref|ZP_13634105.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4B]
gi|419094848|ref|ZP_13640123.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4C]
gi|419100569|ref|ZP_13645756.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4D]
gi|419106293|ref|ZP_13651414.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4E]
gi|419111675|ref|ZP_13656726.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4F]
gi|419113645|ref|ZP_13658678.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5A]
gi|419128492|ref|ZP_13673362.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5C]
gi|419133800|ref|ZP_13678624.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5D]
gi|419138937|ref|ZP_13683727.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5E]
gi|419177372|ref|ZP_13721180.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7B]
gi|419183056|ref|ZP_13726664.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7C]
gi|419188672|ref|ZP_13732176.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7D]
gi|419194056|ref|ZP_13737493.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7E]
gi|419199374|ref|ZP_13742663.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC8A]
gi|419229459|ref|ZP_13772293.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9A]
gi|419235004|ref|ZP_13777768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9B]
gi|419240324|ref|ZP_13783026.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9C]
gi|419245727|ref|ZP_13788357.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9D]
gi|419251686|ref|ZP_13794250.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9E]
gi|419257596|ref|ZP_13800091.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10A]
gi|419263721|ref|ZP_13806124.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10B]
gi|419269650|ref|ZP_13811990.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10C]
gi|419280672|ref|ZP_13822909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10E]
gi|419286804|ref|ZP_13828962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10F]
gi|419347411|ref|ZP_13888779.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13A]
gi|419351872|ref|ZP_13893200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13B]
gi|419357341|ref|ZP_13898587.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13C]
gi|419362317|ref|ZP_13903523.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13D]
gi|419367335|ref|ZP_13908484.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13E]
gi|419377730|ref|ZP_13918746.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14B]
gi|419383067|ref|ZP_13924009.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14C]
gi|419388363|ref|ZP_13929230.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14D]
gi|419702474|ref|ZP_14230067.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli SCI-07]
gi|419804976|ref|ZP_14330124.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AI27]
gi|419867062|ref|ZP_14389400.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H25 str. CVM9340]
gi|419890040|ref|ZP_14410348.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9570]
gi|419894944|ref|ZP_14414817.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9574]
gi|419902004|ref|ZP_14421285.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM9942]
gi|419907362|ref|ZP_14426196.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[Escherichia coli O26:H11 str. CVM10026]
gi|419912121|ref|ZP_14430580.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KD1]
gi|419924735|ref|ZP_14442609.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 541-15]
gi|419934180|ref|ZP_14451323.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 576-1]
gi|419943827|ref|ZP_14460340.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HM605]
gi|419949645|ref|ZP_14465884.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CUMT8]
gi|420087539|ref|ZP_14599498.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9602]
gi|420097302|ref|ZP_14608605.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9634]
gi|420113791|ref|ZP_14623501.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10021]
gi|420120488|ref|ZP_14629697.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10030]
gi|420127040|ref|ZP_14635720.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10224]
gi|420133952|ref|ZP_14642111.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM9952]
gi|420272023|ref|ZP_14774373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA22]
gi|420277709|ref|ZP_14779988.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA40]
gi|420282602|ref|ZP_14784834.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW06591]
gi|420289264|ref|ZP_14791445.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10246]
gi|420294825|ref|ZP_14796934.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW11039]
gi|420300679|ref|ZP_14802722.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09109]
gi|420306621|ref|ZP_14808609.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10119]
gi|420311503|ref|ZP_14813432.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1738]
gi|420317784|ref|ZP_14819653.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1734]
gi|420328054|ref|ZP_14829792.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri CCH060]
gi|420345754|ref|ZP_14847183.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 965-58]
gi|420355170|ref|ZP_14856244.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 4444-74]
gi|420365651|ref|ZP_14866514.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 4822-66]
gi|420382922|ref|ZP_14882347.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 225-75]
gi|420387914|ref|ZP_14887247.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa12]
gi|421685052|ref|ZP_16124829.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1485-80]
gi|421814623|ref|ZP_16250324.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0416]
gi|421820368|ref|ZP_16255853.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0821]
gi|421826512|ref|ZP_16261865.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK920]
gi|421827633|ref|ZP_16262971.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA7]
gi|422334751|ref|ZP_16415756.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 4_1_47FAA]
gi|422352251|ref|ZP_16433042.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 117-3]
gi|422360795|ref|ZP_16441424.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 110-3]
gi|422376053|ref|ZP_16456311.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 60-1]
gi|422380660|ref|ZP_16460834.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 57-2]
gi|422751489|ref|ZP_16805398.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H252]
gi|422756694|ref|ZP_16810516.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H263]
gi|422764192|ref|ZP_16817944.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1167]
gi|422778203|ref|ZP_16831853.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H120]
gi|422807684|ref|ZP_16856113.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii B253]
gi|422829754|ref|ZP_16877918.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B093]
gi|422841654|ref|ZP_16889623.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H397]
gi|423707926|ref|ZP_17682306.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B799]
gi|423727692|ref|ZP_17701556.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA31]
gi|424079892|ref|ZP_17816847.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA505]
gi|424086296|ref|ZP_17822777.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA517]
gi|424092703|ref|ZP_17828625.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1996]
gi|424099380|ref|ZP_17834642.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1985]
gi|424105583|ref|ZP_17840316.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1990]
gi|424112229|ref|ZP_17846451.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93-001]
gi|424118170|ref|ZP_17851998.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA3]
gi|424124361|ref|ZP_17857657.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA5]
gi|424130502|ref|ZP_17863400.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA9]
gi|424136837|ref|ZP_17869273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA10]
gi|424143390|ref|ZP_17875243.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA14]
gi|424149777|ref|ZP_17881143.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA15]
gi|424155663|ref|ZP_17886555.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA24]
gi|424255896|ref|ZP_17892101.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA25]
gi|424334634|ref|ZP_17898010.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA28]
gi|424452074|ref|ZP_17903730.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA32]
gi|424458258|ref|ZP_17909357.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA33]
gi|424464743|ref|ZP_17915088.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA39]
gi|424471030|ref|ZP_17920828.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA41]
gi|424477524|ref|ZP_17926831.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA42]
gi|424483285|ref|ZP_17932256.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW07945]
gi|424489467|ref|ZP_17938005.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09098]
gi|424496180|ref|ZP_17943740.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09195]
gi|424502818|ref|ZP_17949697.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4203]
gi|424509081|ref|ZP_17955449.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4196]
gi|424516445|ref|ZP_17961049.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW14313]
gi|424522621|ref|ZP_17966723.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW14301]
gi|424528494|ref|ZP_17972201.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4421]
gi|424534645|ref|ZP_17977982.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4422]
gi|424540701|ref|ZP_17983635.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4013]
gi|424546853|ref|ZP_17989198.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4402]
gi|424553060|ref|ZP_17994888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4439]
gi|424559245|ref|ZP_18000641.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4436]
gi|424565579|ref|ZP_18006573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4437]
gi|424571712|ref|ZP_18012247.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4448]
gi|424577871|ref|ZP_18017908.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1845]
gi|424583682|ref|ZP_18023318.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1863]
gi|424749775|ref|ZP_18177854.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424773511|ref|ZP_18200571.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CFSAN001632]
gi|424818422|ref|ZP_18243573.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ECD227]
gi|424840060|ref|ZP_18264697.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5a str.
M90T]
gi|425100352|ref|ZP_18503074.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3.4870]
gi|425106456|ref|ZP_18508762.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5.2239]
gi|425112461|ref|ZP_18514372.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 6.0172]
gi|425128391|ref|ZP_18529549.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0586]
gi|425134132|ref|ZP_18534973.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.2524]
gi|425140750|ref|ZP_18541121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0833]
gi|425146420|ref|ZP_18546402.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0869]
gi|425152537|ref|ZP_18552141.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.0221]
gi|425158409|ref|ZP_18557664.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA34]
gi|425164755|ref|ZP_18563633.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA506]
gi|425170503|ref|ZP_18568966.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA507]
gi|425176552|ref|ZP_18574662.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA504]
gi|425182609|ref|ZP_18580294.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1999]
gi|425188880|ref|ZP_18586142.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1997]
gi|425195638|ref|ZP_18592398.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE1487]
gi|425202114|ref|ZP_18598312.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE037]
gi|425208494|ref|ZP_18604281.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK2001]
gi|425214251|ref|ZP_18609642.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA4]
gi|425220377|ref|ZP_18615329.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA23]
gi|425227016|ref|ZP_18621473.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA49]
gi|425233180|ref|ZP_18627209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA45]
gi|425239103|ref|ZP_18632813.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TT12B]
gi|425245336|ref|ZP_18638633.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MA6]
gi|425251532|ref|ZP_18644464.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5905]
gi|425257316|ref|ZP_18649813.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CB7326]
gi|425263581|ref|ZP_18655567.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC96038]
gi|425269569|ref|ZP_18661188.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5412]
gi|425290842|ref|ZP_18681654.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3006]
gi|425297036|ref|ZP_18687177.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA38]
gi|425302502|ref|ZP_18692382.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 07798]
gi|425313711|ref|ZP_18702877.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1735]
gi|425319691|ref|ZP_18708468.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1736]
gi|425325808|ref|ZP_18714145.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1737]
gi|425332158|ref|ZP_18719979.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1846]
gi|425338334|ref|ZP_18725676.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1847]
gi|425344648|ref|ZP_18731528.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1848]
gi|425350485|ref|ZP_18736940.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1849]
gi|425356757|ref|ZP_18742813.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1850]
gi|425362716|ref|ZP_18748352.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1856]
gi|425368955|ref|ZP_18754050.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1862]
gi|425375250|ref|ZP_18759880.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1864]
gi|425381953|ref|ZP_18765937.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1865]
gi|425388138|ref|ZP_18771687.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1866]
gi|425394831|ref|ZP_18777929.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1868]
gi|425400926|ref|ZP_18783622.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1869]
gi|425407021|ref|ZP_18789232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1870]
gi|425413405|ref|ZP_18795157.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE098]
gi|425419716|ref|ZP_18800976.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK523]
gi|425424647|ref|ZP_18805795.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 0.1288]
gi|425430991|ref|ZP_18811590.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 0.1304]
gi|427806832|ref|ZP_18973899.1| formamidopyrimidine DNA glycosylase [Escherichia coli chi7122]
gi|427811418|ref|ZP_18978483.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|428949428|ref|ZP_19021690.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.1467]
gi|428955497|ref|ZP_19027279.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.1042]
gi|428961498|ref|ZP_19032778.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 89.0511]
gi|428968105|ref|ZP_19038806.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.0091]
gi|428973855|ref|ZP_19044167.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.0039]
gi|428980281|ref|ZP_19050085.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.2281]
gi|428986032|ref|ZP_19055413.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93.0055]
gi|428992212|ref|ZP_19061190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93.0056]
gi|428998104|ref|ZP_19066686.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 94.0618]
gi|429004457|ref|ZP_19072533.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0183]
gi|429010469|ref|ZP_19077898.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.1288]
gi|429016991|ref|ZP_19083862.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0943]
gi|429022792|ref|ZP_19089298.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0428]
gi|429028904|ref|ZP_19094880.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0427]
gi|429035061|ref|ZP_19100573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0939]
gi|429041162|ref|ZP_19106243.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0932]
gi|429047014|ref|ZP_19111716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0107]
gi|429052364|ref|ZP_19116923.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0003]
gi|429057881|ref|ZP_19122141.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.1742]
gi|429063420|ref|ZP_19127392.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0007]
gi|429069610|ref|ZP_19133050.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0672]
gi|429075415|ref|ZP_19138660.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0678]
gi|429080619|ref|ZP_19143747.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0713]
gi|429828813|ref|ZP_19359813.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0109]
gi|429835254|ref|ZP_19365524.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0010]
gi|432355662|ref|ZP_19598927.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE2]
gi|432360098|ref|ZP_19603310.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE4]
gi|432364897|ref|ZP_19608051.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE5]
gi|432378812|ref|ZP_19621793.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE12]
gi|432383540|ref|ZP_19626465.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE15]
gi|432389448|ref|ZP_19632327.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE16]
gi|432399585|ref|ZP_19642358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE25]
gi|432404035|ref|ZP_19646779.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE26]
gi|432408709|ref|ZP_19651411.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE28]
gi|432424045|ref|ZP_19666582.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE178]
gi|432428303|ref|ZP_19670783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE181]
gi|432443133|ref|ZP_19685467.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE189]
gi|432448251|ref|ZP_19690546.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE191]
gi|432451892|ref|ZP_19694146.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE193]
gi|432463002|ref|ZP_19705134.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE204]
gi|432472985|ref|ZP_19715021.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE206]
gi|432477997|ref|ZP_19719983.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE208]
gi|432482954|ref|ZP_19724903.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE210]
gi|432491417|ref|ZP_19733278.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE213]
gi|432502198|ref|ZP_19743948.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE216]
gi|432516033|ref|ZP_19753248.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE224]
gi|432519855|ref|ZP_19757034.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE228]
gi|432528480|ref|ZP_19765552.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE233]
gi|432536046|ref|ZP_19773001.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE234]
gi|432540018|ref|ZP_19776909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE235]
gi|432555726|ref|ZP_19792443.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE47]
gi|432560908|ref|ZP_19797561.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE49]
gi|432575886|ref|ZP_19812355.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE55]
gi|432590073|ref|ZP_19826424.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE58]
gi|432599901|ref|ZP_19836170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE62]
gi|432604468|ref|ZP_19840697.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE66]
gi|432613647|ref|ZP_19849804.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE72]
gi|432633536|ref|ZP_19869454.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE80]
gi|432643233|ref|ZP_19879055.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE83]
gi|432648314|ref|ZP_19884099.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE86]
gi|432657879|ref|ZP_19893575.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE93]
gi|432668226|ref|ZP_19903797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE116]
gi|432696508|ref|ZP_19931699.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE162]
gi|432701159|ref|ZP_19936303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE169]
gi|432707983|ref|ZP_19943058.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE6]
gi|432715491|ref|ZP_19950515.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE8]
gi|432725103|ref|ZP_19960016.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE17]
gi|432729684|ref|ZP_19964557.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE18]
gi|432734399|ref|ZP_19969221.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE45]
gi|432743374|ref|ZP_19978088.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE23]
gi|432747619|ref|ZP_19982280.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE43]
gi|432756576|ref|ZP_19991119.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE22]
gi|432761484|ref|ZP_19995972.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE46]
gi|432772412|ref|ZP_20006724.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE54]
gi|432780652|ref|ZP_20014871.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE59]
gi|432789645|ref|ZP_20023771.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE65]
gi|432803837|ref|ZP_20037788.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE84]
gi|432807874|ref|ZP_20041787.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE91]
gi|432811367|ref|ZP_20045223.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE101]
gi|432823081|ref|ZP_20056768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE118]
gi|432824540|ref|ZP_20058203.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE123]
gi|432829259|ref|ZP_20062874.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE135]
gi|432841446|ref|ZP_20074903.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE140]
gi|432889118|ref|ZP_20102707.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE158]
gi|432891190|ref|ZP_20103948.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE165]
gi|432907345|ref|ZP_20115821.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE194]
gi|432915235|ref|ZP_20120562.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE190]
gi|432922897|ref|ZP_20125620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE173]
gi|432929506|ref|ZP_20130556.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE175]
gi|432931135|ref|ZP_20131407.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE184]
gi|432940451|ref|ZP_20138365.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE183]
gi|432950311|ref|ZP_20144600.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE196]
gi|432965399|ref|ZP_20154322.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE203]
gi|432973917|ref|ZP_20162760.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE207]
gi|432983087|ref|ZP_20171856.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE211]
gi|432987490|ref|ZP_20176201.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE215]
gi|432992744|ref|ZP_20181392.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE217]
gi|433007230|ref|ZP_20195652.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE227]
gi|433009846|ref|ZP_20198257.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE229]
gi|433015959|ref|ZP_20204288.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE104]
gi|433020893|ref|ZP_20208972.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE105]
gi|433025523|ref|ZP_20213492.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE106]
gi|433035551|ref|ZP_20223240.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE112]
gi|433040652|ref|ZP_20228240.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE113]
gi|433045182|ref|ZP_20232656.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE117]
gi|433053094|ref|ZP_20240289.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE122]
gi|433069997|ref|ZP_20256763.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE128]
gi|433079832|ref|ZP_20266348.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE131]
gi|433084571|ref|ZP_20271016.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE133]
gi|433094037|ref|ZP_20280285.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE138]
gi|433098463|ref|ZP_20284630.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE139]
gi|433103242|ref|ZP_20289311.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE145]
gi|433107901|ref|ZP_20293860.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE148]
gi|433112879|ref|ZP_20298729.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE150]
gi|433132199|ref|ZP_20317621.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE163]
gi|433136895|ref|ZP_20322218.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE166]
gi|433146281|ref|ZP_20331411.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE168]
gi|433155823|ref|ZP_20340750.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE176]
gi|433160793|ref|ZP_20345609.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE177]
gi|433165662|ref|ZP_20350387.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE179]
gi|433170657|ref|ZP_20355273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE180]
gi|433180512|ref|ZP_20364887.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE82]
gi|433190450|ref|ZP_20374536.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE88]
gi|433195692|ref|ZP_20379661.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE90]
gi|433200397|ref|ZP_20384280.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE94]
gi|433205375|ref|ZP_20389120.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE95]
gi|433321751|ref|ZP_20399309.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli J96]
gi|443619706|ref|YP_007383562.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli APEC O78]
gi|444927313|ref|ZP_21246576.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 09BKT078844]
gi|444932900|ref|ZP_21251914.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0814]
gi|444938383|ref|ZP_21257124.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0815]
gi|444943974|ref|ZP_21262464.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0816]
gi|444949455|ref|ZP_21267749.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0839]
gi|444955135|ref|ZP_21273204.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0848]
gi|444960521|ref|ZP_21278347.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1753]
gi|444965757|ref|ZP_21283322.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1775]
gi|444971730|ref|ZP_21289073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1793]
gi|444977028|ref|ZP_21294114.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1805]
gi|444982401|ref|ZP_21299301.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 700728]
gi|444987815|ref|ZP_21304585.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA11]
gi|444993123|ref|ZP_21309757.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA19]
gi|444998356|ref|ZP_21314848.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA13]
gi|445003893|ref|ZP_21320274.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA2]
gi|445009275|ref|ZP_21325506.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA47]
gi|445014405|ref|ZP_21330503.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA48]
gi|445020316|ref|ZP_21336275.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA8]
gi|445025690|ref|ZP_21341506.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 7.1982]
gi|445031149|ref|ZP_21346809.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1781]
gi|445036540|ref|ZP_21352061.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1762]
gi|445042245|ref|ZP_21357609.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA35]
gi|445047437|ref|ZP_21362678.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3.4880]
gi|445053026|ref|ZP_21368041.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0083]
gi|445061056|ref|ZP_21373566.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0670]
gi|452968934|ref|ZP_21967161.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. EC4009]
gi|54037117|sp|P64149.3|FPG_SHIFL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|54040771|sp|P64148.3|FPG_ECO57 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|90101316|sp|Q31UZ1.3|FPG_SHIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|90101318|sp|Q3YVZ7.3|FPG_SHISS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|122421890|sp|Q1R4V8.1|FPG_ECOUT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|122957052|sp|Q0SYG3.1|FPG_SHIF8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166215623|sp|A1AHG8.1|FPG_ECOK1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166988459|sp|A7ZTI6.1|FPG_ECO24 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|189044588|sp|B1IZF8.1|FPG_ECOLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226706479|sp|B7MFJ6.1|FPG_ECO45 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226706481|sp|B7M4B9.1|FPG_ECO8A RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226706482|sp|B7NET9.1|FPG_ECOLU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226706483|sp|B1LK72.1|FPG_ECOSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|226706484|sp|B7LVJ6.1|FPG_ESCF3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238066643|sp|B5YWD3.1|FPG_ECO5E RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238066644|sp|B6I3L2.1|FPG_ECOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238691677|sp|B2TTU9.1|FPG_SHIB3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789436|sp|B7ULJ0.1|FPG_ECO27 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789438|sp|B7N2X1.1|FPG_ECO81 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|12518391|gb|AAG58779.1|AE005591_3 formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str.
EDL933]
gi|13363985|dbj|BAB37933.1| formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str.
Sakai]
gi|30043350|gb|AAP19071.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str.
2457T]
gi|56383941|gb|AAN45121.2| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 301]
gi|73857608|gb|AAZ90315.1| formamidopyrimidine DNA glycosylase [Shigella sonnei Ss046]
gi|81247409|gb|ABB68117.1| formamidopyrimidine DNA glycosylase [Shigella boydii Sb227]
gi|91074725|gb|ABE09606.1| formamidopyrimidine DNA glycosylase [Escherichia coli UTI89]
gi|110617235|gb|ABF05902.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 5 str. 8401]
gi|115515033|gb|ABJ03108.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1]
gi|157080322|gb|ABV20030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A]
gi|169753063|gb|ACA75762.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739]
gi|170521771|gb|ACB19949.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5]
gi|187428315|gb|ACD07589.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94]
gi|187771367|gb|EDU35211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4196]
gi|188016969|gb|EDU55091.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4113]
gi|188487129|gb|EDU62232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638]
gi|189002553|gb|EDU71539.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4076]
gi|189358964|gb|EDU77383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4401]
gi|189364460|gb|EDU82879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4486]
gi|189369599|gb|EDU88015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4501]
gi|189374639|gb|EDU93055.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC869]
gi|190902166|gb|EDV61909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A]
gi|190909166|gb|EDV68752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11]
gi|194420444|gb|EDX36520.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012]
gi|208735306|gb|EDZ83993.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4045]
gi|208740876|gb|EDZ88558.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4042]
gi|209160268|gb|ACI37701.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC4115]
gi|209754668|gb|ACI75646.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|209754670|gb|ACI75647.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|209754672|gb|ACI75648.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|209754674|gb|ACI75649.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|209754676|gb|ACI75650.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|209914365|dbj|BAG79439.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE11]
gi|215266986|emb|CAS11431.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O127:H6 str. E2348/69]
gi|217320740|gb|EEC29164.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
TW14588]
gi|218358704|emb|CAQ91360.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia fergusonii ATCC 35469]
gi|218362965|emb|CAR00602.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli IAI1]
gi|218367476|emb|CAR05258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli S88]
gi|218429483|emb|CAV17991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli ED1a]
gi|218434366|emb|CAR15290.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli UMN026]
gi|226838799|gb|EEH70826.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43]
gi|226902669|gb|EEH88928.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA]
gi|254594990|gb|ACT74351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. TW14359]
gi|257756619|dbj|BAI28121.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. 11368]
gi|257766721|dbj|BAI38216.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H- str. 11128]
gi|281180681|dbj|BAI57011.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE15]
gi|281602998|gb|ADA75982.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri 2002017]
gi|284923668|emb|CBG36765.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 042]
gi|290764879|gb|ADD58840.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
(DNA-(apurinic or apyrimidinic site) lyase mutM)
[Escherichia coli O55:H7 str. CB9615]
gi|291426069|gb|EFE99103.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412]
gi|291431127|gb|EFF04120.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185]
gi|291468716|gb|EFF11209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354]
gi|294492817|gb|ADE91573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IHE3034]
gi|298276840|gb|EFI18358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302]
gi|300306882|gb|EFJ61402.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1]
gi|300357755|gb|EFJ73625.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1]
gi|300400612|gb|EFJ84150.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1]
gi|300413151|gb|EFJ96461.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1]
gi|300525052|gb|EFK46121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7]
gi|300532018|gb|EFK53080.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1]
gi|300840831|gb|EFK68591.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1]
gi|305850413|gb|EFM50870.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101]
gi|307628708|gb|ADN73012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UM146]
gi|308118811|gb|EFO56073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7]
gi|309704037|emb|CBJ03383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ETEC H10407]
gi|312287283|gb|EFR15192.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75]
gi|313647491|gb|EFS11941.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str.
2457T]
gi|315254021|gb|EFU33989.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 85-1]
gi|315285378|gb|EFU44823.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 110-3]
gi|320176306|gb|EFW51366.1| Formamidopyrimidine-DNA glycosylase [Shigella dysenteriae CDC
74-1112]
gi|320179971|gb|EFW54913.1| Formamidopyrimidine-DNA glycosylase [Shigella boydii ATCC 9905]
gi|320186825|gb|EFW61545.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri CDC 796-83]
gi|320191314|gb|EFW65964.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
EC1212]
gi|320193858|gb|EFW68491.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli WV_060327]
gi|320201340|gb|EFW75921.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli EC4100B]
gi|320639542|gb|EFX09150.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. G5101]
gi|320644981|gb|EFX14011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H- str. 493-89]
gi|320650248|gb|EFX18737.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H- str. H 2687]
gi|320655600|gb|EFX23528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661334|gb|EFX28758.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. USDA 5905]
gi|320666348|gb|EFX33347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H7 str. LSU-61]
gi|323155286|gb|EFZ41469.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa14]
gi|323166882|gb|EFZ52621.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 53G]
gi|323179395|gb|EFZ64962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OK1180]
gi|323944088|gb|EGB40168.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H120]
gi|323949874|gb|EGB45758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H252]
gi|323954825|gb|EGB50605.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H263]
gi|324008140|gb|EGB77359.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 57-2]
gi|324012605|gb|EGB81824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 60-1]
gi|324019744|gb|EGB88963.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 117-3]
gi|324111529|gb|EGC05510.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii B253]
gi|324116026|gb|EGC09952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1167]
gi|325499442|gb|EGC97301.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ECD227]
gi|326337366|gb|EGD61201.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
1044]
gi|326339891|gb|EGD63698.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str.
1125]
gi|330909697|gb|EGH38211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AA86]
gi|331041948|gb|EGI14092.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605]
gi|331062537|gb|EGI34457.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271]
gi|331072898|gb|EGI44223.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591]
gi|332084445|gb|EGI89640.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 155-74]
gi|332084815|gb|EGI89998.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 5216-82]
gi|332089343|gb|EGI94447.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 3594-74]
gi|332345603|gb|AEE58937.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNK88]
gi|332749910|gb|EGJ80322.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-671]
gi|332750592|gb|EGJ81000.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 4343-70]
gi|332751169|gb|EGJ81572.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2747-71]
gi|332764163|gb|EGJ94400.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2930-71]
gi|332997786|gb|EGK17397.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-272]
gi|333013320|gb|EGK32692.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-227]
gi|333971815|gb|AEG38620.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli NA114]
gi|342930918|gb|EGU99640.1| DNA-formamidopyrimidine glycosylase [Escherichia coli MS 79-10]
gi|345331174|gb|EGW63634.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2534-86]
gi|345331771|gb|EGW64230.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_C165-02]
gi|345334319|gb|EGW66763.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_B2F1]
gi|345347411|gb|EGW79721.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_94C]
gi|345354335|gb|EGW86560.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_DG131-3]
gi|345370354|gb|EGX02332.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_MHI813]
gi|345390518|gb|EGX20316.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TX1999]
gi|355349623|gb|EHF98826.1| formamidopyrimidine-DNA glycosylase [Escherichia coli cloneA_i1]
gi|371603972|gb|EHN92606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H397]
gi|371608236|gb|EHN96795.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B093]
gi|373244230|gb|EHP63718.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 4_1_47FAA]
gi|374361035|gb|AEZ42742.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O55:H7 str. RM12579]
gi|375319542|gb|EHS65672.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O157:H43 str. T22]
gi|377839424|gb|EHU04509.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1A]
gi|377839711|gb|EHU04791.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1C]
gi|377842857|gb|EHU07906.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1B]
gi|377853325|gb|EHU18225.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1D]
gi|377856640|gb|EHU21499.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC1E]
gi|377859155|gb|EHU23990.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2A]
gi|377870922|gb|EHU35595.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2B]
gi|377875051|gb|EHU39671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2D]
gi|377886686|gb|EHU51167.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC2E]
gi|377889646|gb|EHU54106.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3A]
gi|377889839|gb|EHU54298.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3B]
gi|377902622|gb|EHU66925.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3C]
gi|377906843|gb|EHU71084.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3D]
gi|377907507|gb|EHU71731.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3E]
gi|377917766|gb|EHU81822.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC3F]
gi|377923526|gb|EHU87490.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4A]
gi|377927816|gb|EHU91731.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4B]
gi|377937767|gb|EHV01541.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4D]
gi|377938113|gb|EHV01882.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4C]
gi|377944168|gb|EHV07873.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4E]
gi|377954698|gb|EHV18257.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC4F]
gi|377965195|gb|EHV28620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5A]
gi|377970120|gb|EHV33492.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5C]
gi|377970504|gb|EHV33863.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5D]
gi|377981061|gb|EHV44321.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC5E]
gi|378021268|gb|EHV83981.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7C]
gi|378024692|gb|EHV87345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7D]
gi|378029414|gb|EHV92026.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7B]
gi|378034477|gb|EHV97042.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC7E]
gi|378043442|gb|EHW05877.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC8A]
gi|378068340|gb|EHW30443.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9A]
gi|378073694|gb|EHW35740.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9B]
gi|378079399|gb|EHW41376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9C]
gi|378086864|gb|EHW48734.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9D]
gi|378089369|gb|EHW51212.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC9E]
gi|378096103|gb|EHW57879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10A]
gi|378101656|gb|EHW63341.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10B]
gi|378106343|gb|EHW67972.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10C]
gi|378123774|gb|EHW85191.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10E]
gi|378124817|gb|EHW86221.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC10F]
gi|378182944|gb|EHX43592.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13A]
gi|378196049|gb|EHX56539.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13C]
gi|378196270|gb|EHX56758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13B]
gi|378198889|gb|EHX59358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13D]
gi|378209992|gb|EHX70359.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC13E]
gi|378215269|gb|EHX75568.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14B]
gi|378225008|gb|EHX85209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14C]
gi|378228361|gb|EHX88519.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC14D]
gi|380346302|gb|EIA34597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli SCI-07]
gi|383105071|gb|AFG42580.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli P12b]
gi|383469112|gb|EID64133.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5a str.
M90T]
gi|383476620|gb|EID68556.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W26]
gi|384472059|gb|EIE56122.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AI27]
gi|385708839|gb|EIG45841.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B799]
gi|386144562|gb|EIG91028.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 97.0246]
gi|386151271|gb|EIH02560.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 5.0588]
gi|386166684|gb|EIH33204.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 96.0497]
gi|386187000|gb|EIH75823.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 4.0522]
gi|386203291|gb|EII02282.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 96.154]
gi|386230344|gb|EII57699.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3.3884]
gi|386250158|gb|EII96325.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TW07793]
gi|386259185|gb|EIJ14659.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 900105 (10e)]
gi|386798269|gb|AFJ31303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli Xuzhou21]
gi|388333263|gb|EIK99899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O103:H25 str. CVM9340]
gi|388355603|gb|EIL20426.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9570]
gi|388362583|gb|EIL26582.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9574]
gi|388374853|gb|EIL37943.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM9942]
gi|388377236|gb|EIL40062.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[Escherichia coli O26:H11 str. CVM10026]
gi|388388848|gb|EIL50396.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 541-15]
gi|388392220|gb|EIL53647.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KD1]
gi|388409611|gb|EIL69888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 576-1]
gi|388418746|gb|EIL78528.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CUMT8]
gi|388420024|gb|EIL79729.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HM605]
gi|390638077|gb|EIN17598.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1996]
gi|390638855|gb|EIN18346.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA505]
gi|390639479|gb|EIN18953.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA517]
gi|390656825|gb|EIN34666.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1985]
gi|390657272|gb|EIN35096.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93-001]
gi|390660423|gb|EIN38128.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1990]
gi|390674615|gb|EIN50791.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA3]
gi|390678025|gb|EIN54024.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA5]
gi|390681666|gb|EIN57458.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA9]
gi|390692725|gb|EIN67387.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA10]
gi|390696978|gb|EIN71413.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA14]
gi|390698069|gb|EIN72460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA15]
gi|390711698|gb|EIN84659.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA22]
gi|390718852|gb|EIN91594.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA25]
gi|390719613|gb|EIN92337.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA24]
gi|390724841|gb|EIN97376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA28]
gi|390737924|gb|EIO09166.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA31]
gi|390738679|gb|EIO09885.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA32]
gi|390741973|gb|EIO12999.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA33]
gi|390755906|gb|EIO25427.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA40]
gi|390760503|gb|EIO29826.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA39]
gi|390763622|gb|EIO32857.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA41]
gi|390765694|gb|EIO34851.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA42]
gi|390779393|gb|EIO47107.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW06591]
gi|390786491|gb|EIO54003.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW07945]
gi|390787238|gb|EIO54730.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10246]
gi|390793421|gb|EIO60758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW11039]
gi|390800928|gb|EIO67995.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09098]
gi|390805050|gb|EIO71998.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09109]
gi|390814336|gb|EIO80916.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10119]
gi|390822980|gb|EIO89058.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4203]
gi|390823664|gb|EIO89703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW09195]
gi|390827953|gb|EIO93653.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4196]
gi|390841627|gb|EIP05538.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW14313]
gi|390843355|gb|EIP07156.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW14301]
gi|390848145|gb|EIP11629.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4421]
gi|390858586|gb|EIP20965.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4422]
gi|390863021|gb|EIP25178.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4013]
gi|390867064|gb|EIP28918.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4402]
gi|390875460|gb|EIP36486.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4439]
gi|390881064|gb|EIP41702.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4436]
gi|390890760|gb|EIP50414.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4437]
gi|390892496|gb|EIP52082.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC4448]
gi|390898860|gb|EIP58121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1738]
gi|390906098|gb|EIP65012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1734]
gi|390916268|gb|EIP74741.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1863]
gi|390916723|gb|EIP75174.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1845]
gi|391245719|gb|EIQ04986.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri CCH060]
gi|391273608|gb|EIQ32432.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 4444-74]
gi|391275806|gb|EIQ34589.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 965-58]
gi|391281092|gb|EIQ39745.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 3233-85]
gi|391291973|gb|EIQ50333.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 4822-66]
gi|391297788|gb|EIQ55827.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 225-75]
gi|391301932|gb|EIQ59809.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa12]
gi|394384834|gb|EJE62387.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9634]
gi|394390284|gb|EJE67303.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10224]
gi|394392852|gb|EJE69586.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CVM9602]
gi|394410931|gb|EJE85248.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10021]
gi|394423484|gb|EJE96730.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM9952]
gi|394429251|gb|EJF01690.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CVM10030]
gi|397894006|gb|EJL10458.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 6603-63]
gi|397895684|gb|EJL12110.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei str. Moseley]
gi|404335018|gb|EJZ61493.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1485-80]
gi|408064896|gb|EKG99377.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK920]
gi|408066612|gb|EKH01062.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA34]
gi|408074221|gb|EKH08506.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA7]
gi|408076732|gb|EKH10953.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA506]
gi|408080556|gb|EKH14621.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA507]
gi|408088774|gb|EKH22121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FDA504]
gi|408094856|gb|EKH27856.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1999]
gi|408101290|gb|EKH33750.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK1997]
gi|408106068|gb|EKH38189.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE1487]
gi|408112763|gb|EKH44380.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE037]
gi|408119083|gb|EKH50177.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK2001]
gi|408125259|gb|EKH55870.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA4]
gi|408135040|gb|EKH64845.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA23]
gi|408137290|gb|EKH66995.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA49]
gi|408144141|gb|EKH73389.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA45]
gi|408152463|gb|EKH80896.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TT12B]
gi|408157553|gb|EKH85697.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MA6]
gi|408161576|gb|EKH89523.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5905]
gi|408170714|gb|EKH97872.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CB7326]
gi|408177669|gb|EKI04440.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC96038]
gi|408180861|gb|EKI07457.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5412]
gi|408209263|gb|EKI33864.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3006]
gi|408210839|gb|EKI35396.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 07798]
gi|408213844|gb|EKI38322.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA38]
gi|408224186|gb|EKI47911.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1735]
gi|408235585|gb|EKI58528.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1736]
gi|408238976|gb|EKI61746.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1737]
gi|408243961|gb|EKI66438.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1846]
gi|408252495|gb|EKI74139.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1847]
gi|408256699|gb|EKI78066.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1848]
gi|408263163|gb|EKI84035.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1849]
gi|408271567|gb|EKI91690.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1850]
gi|408274504|gb|EKI94504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1856]
gi|408282899|gb|EKJ02149.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1862]
gi|408288933|gb|EKJ07724.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1864]
gi|408293341|gb|EKJ11785.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1865]
gi|408304180|gb|EKJ21610.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1868]
gi|408305176|gb|EKJ22582.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1866]
gi|408316372|gb|EKJ32650.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1869]
gi|408321690|gb|EKJ37705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EC1870]
gi|408324126|gb|EKJ40078.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NE098]
gi|408334325|gb|EKJ49215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FRIK523]
gi|408340772|gb|EKJ55252.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 0.1288]
gi|408342960|gb|EKJ57373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 0.1304]
gi|408545577|gb|EKK23005.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 5.2239]
gi|408546066|gb|EKK23485.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3.4870]
gi|408546867|gb|EKK24271.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 6.0172]
gi|408564292|gb|EKK40403.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0586]
gi|408576072|gb|EKK51692.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0833]
gi|408578983|gb|EKK54468.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.2524]
gi|408588891|gb|EKK63444.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0869]
gi|408594052|gb|EKK68347.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.0221]
gi|408599234|gb|EKK73152.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 8.0416]
gi|408609543|gb|EKK82921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 10.0821]
gi|412965014|emb|CCK48944.1| formamidopyrimidine DNA glycosylase [Escherichia coli chi7122]
gi|412971597|emb|CCJ46260.1| formamidopyrimidine DNA glycosylase [Escherichia coli]
gi|421936280|gb|EKT93947.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O111:H8 str. CFSAN001632]
gi|421941525|gb|EKT98918.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli O26:H11 str. CFSAN001629]
gi|427201840|gb|EKV72207.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.1042]
gi|427202301|gb|EKV72634.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 89.0511]
gi|427205356|gb|EKV75606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 88.1467]
gi|427218289|gb|EKV87304.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.0091]
gi|427221613|gb|EKV90437.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.2281]
gi|427225051|gb|EKV93716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 90.0039]
gi|427238808|gb|EKW06312.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93.0056]
gi|427238979|gb|EKW06477.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 93.0055]
gi|427243231|gb|EKW10616.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 94.0618]
gi|427256732|gb|EKW22884.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0183]
gi|427258307|gb|EKW24400.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0943]
gi|427260335|gb|EKW26325.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.1288]
gi|427273496|gb|EKW38177.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0428]
gi|427275916|gb|EKW40501.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0427]
gi|427280943|gb|EKW45283.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0939]
gi|427289341|gb|EKW52904.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0932]
gi|427296139|gb|EKW59202.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0107]
gi|427298269|gb|EKW61285.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0003]
gi|427308550|gb|EKW70923.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.1742]
gi|427311612|gb|EKW73802.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0007]
gi|427316419|gb|EKW78366.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0672]
gi|427325383|gb|EKW86825.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0678]
gi|427326883|gb|EKW88288.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0713]
gi|429251294|gb|EKY35903.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 96.0109]
gi|429252248|gb|EKY36794.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 97.0010]
gi|430872501|gb|ELB96105.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE2]
gi|430873232|gb|ELB96807.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE4]
gi|430883187|gb|ELC06191.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE5]
gi|430895762|gb|ELC18015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE12]
gi|430903439|gb|ELC25176.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE16]
gi|430903925|gb|ELC25661.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE15]
gi|430912747|gb|ELC33919.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE25]
gi|430923448|gb|ELC44185.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE26]
gi|430926083|gb|ELC46671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE28]
gi|430941673|gb|ELC61815.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE178]
gi|430950532|gb|ELC69761.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE181]
gi|430963336|gb|ELC80923.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE189]
gi|430970636|gb|ELC87681.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE191]
gi|430977042|gb|ELC93893.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE193]
gi|430985582|gb|ELD02179.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE204]
gi|430995432|gb|ELD11725.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE206]
gi|431002026|gb|ELD17592.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE208]
gi|431003972|gb|ELD19205.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE210]
gi|431017903|gb|ELD31356.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE213]
gi|431025866|gb|ELD38952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE216]
gi|431038728|gb|ELD49624.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE224]
gi|431048107|gb|ELD58092.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE228]
gi|431057419|gb|ELD66862.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE234]
gi|431060057|gb|ELD69395.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE233]
gi|431066845|gb|ELD75466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE235]
gi|431080849|gb|ELD87635.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE47]
gi|431088403|gb|ELD94281.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE49]
gi|431104659|gb|ELE09032.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE55]
gi|431117585|gb|ELE20813.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE58]
gi|431127776|gb|ELE30070.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE62]
gi|431137107|gb|ELE38955.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE66]
gi|431146669|gb|ELE48105.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE72]
gi|431167223|gb|ELE67504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE80]
gi|431177404|gb|ELE77335.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE83]
gi|431178287|gb|ELE78200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE86]
gi|431187990|gb|ELE87489.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE93]
gi|431197568|gb|ELE96415.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE116]
gi|431231152|gb|ELF26920.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE162]
gi|431240270|gb|ELF34732.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE169]
gi|431251747|gb|ELF45753.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE8]
gi|431254937|gb|ELF48198.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE6]
gi|431262322|gb|ELF54312.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE17]
gi|431270825|gb|ELF61968.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE18]
gi|431271012|gb|ELF62154.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE45]
gi|431281531|gb|ELF72434.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE23]
gi|431289519|gb|ELF80260.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE43]
gi|431299464|gb|ELF89035.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE22]
gi|431305420|gb|ELF93743.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE46]
gi|431323501|gb|ELG10994.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE54]
gi|431324493|gb|ELG11945.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE59]
gi|431334814|gb|ELG21958.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE65]
gi|431345585|gb|ELG32501.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE84]
gi|431352731|gb|ELG39496.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE91]
gi|431359823|gb|ELG46448.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE101]
gi|431365290|gb|ELG51804.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE118]
gi|431377482|gb|ELG62608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE123]
gi|431382202|gb|ELG66542.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE135]
gi|431385909|gb|ELG69874.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE140]
gi|431413445|gb|ELG96211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE158]
gi|431428311|gb|ELH10253.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE194]
gi|431430305|gb|ELH12137.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE165]
gi|431434817|gb|ELH16431.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE173]
gi|431436303|gb|ELH17910.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE190]
gi|431440914|gb|ELH22242.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE175]
gi|431452617|gb|ELH33029.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE196]
gi|431460345|gb|ELH40634.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE183]
gi|431460570|gb|ELH40858.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE184]
gi|431476891|gb|ELH56678.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE203]
gi|431479264|gb|ELH59007.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE207]
gi|431488845|gb|ELH68475.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE211]
gi|431490762|gb|ELH70370.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE217]
gi|431494248|gb|ELH73837.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE215]
gi|431509837|gb|ELH88085.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE227]
gi|431521228|gb|ELH98476.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE229]
gi|431526527|gb|ELI03275.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE104]
gi|431526813|gb|ELI03549.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE105]
gi|431531251|gb|ELI07919.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE106]
gi|431546514|gb|ELI20910.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE112]
gi|431548489|gb|ELI22770.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE113]
gi|431552579|gb|ELI26532.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE117]
gi|431571490|gb|ELI44360.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE122]
gi|431578839|gb|ELI51428.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE128]
gi|431593879|gb|ELI64170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE131]
gi|431597975|gb|ELI67876.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE133]
gi|431606761|gb|ELI76133.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE138]
gi|431612463|gb|ELI81710.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE139]
gi|431616005|gb|ELI85073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE145]
gi|431623799|gb|ELI92425.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE148]
gi|431625217|gb|ELI93810.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE150]
gi|431642942|gb|ELJ10647.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE163]
gi|431653092|gb|ELJ20204.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE166]
gi|431657466|gb|ELJ24430.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE168]
gi|431670254|gb|ELJ36608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE176]
gi|431673489|gb|ELJ39711.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE177]
gi|431683558|gb|ELJ49187.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE179]
gi|431683982|gb|ELJ49603.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE180]
gi|431697854|gb|ELJ62941.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE82]
gi|431702090|gb|ELJ66891.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE88]
gi|431713140|gb|ELJ77397.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE90]
gi|431716174|gb|ELJ80311.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE95]
gi|431717411|gb|ELJ81509.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE94]
gi|432349554|gb|ELL43981.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli J96]
gi|443424214|gb|AGC89118.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli APEC O78]
gi|444535364|gb|ELV15450.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0814]
gi|444536945|gb|ELV16919.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 09BKT078844]
gi|444545675|gb|ELV24513.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0815]
gi|444554987|gb|ELV32483.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0816]
gi|444555034|gb|ELV32527.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0839]
gi|444560053|gb|ELV37235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0848]
gi|444569476|gb|ELV46064.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1753]
gi|444573294|gb|ELV49678.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1775]
gi|444576643|gb|ELV52801.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1793]
gi|444589519|gb|ELV64849.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1805]
gi|444589870|gb|ELV65191.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 700728]
gi|444589941|gb|ELV65260.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA11]
gi|444603896|gb|ELV78587.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA13]
gi|444604057|gb|ELV78740.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA19]
gi|444612877|gb|ELV87157.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA2]
gi|444620324|gb|ELV94332.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA47]
gi|444620972|gb|ELV94961.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA48]
gi|444627396|gb|ELW01160.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA8]
gi|444635686|gb|ELW09103.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 7.1982]
gi|444638015|gb|ELW11368.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1781]
gi|444642646|gb|ELW15828.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.1762]
gi|444652021|gb|ELW24800.1| formamidopyrimidine-DNA glycosylase [Escherichia coli PA35]
gi|444657393|gb|ELW29873.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3.4880]
gi|444660416|gb|ELW32786.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 95.0083]
gi|444667230|gb|ELW39269.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 99.0670]
Length = 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|452853030|ref|YP_007494714.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio piezophilus]
gi|451896684|emb|CCH49563.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio piezophilus]
Length = 274
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ G++I + D ++ + A+ +LG+ I+ A+R+ K
Sbjct: 1 MPELPEVEVIARGLDSTLPGRRIALANHVDLTRLSE--PAATLLPRILGRRIVRAYRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + V K+ + F+ LDDG L
Sbjct: 59 VLLIELSEGMTMAFHLKMTGRV--------------VHGPTRRAQKHDRLFLSLDDGSLL 104
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
SF+D R+F VR + S + + GP+ L + D L +K IKALLL+Q
Sbjct: 105 SFSDMRKFGYVRSFTAEELGSWCFLEKCGPEPLETSPRI--LADRLEGRKGKIKALLLNQ 162
Query: 179 SYISGIGNWVADEVLYQAKIHP 200
S + G+GN ADE L+ A IHP
Sbjct: 163 SVVVGVGNIYADESLFHAGIHP 184
>gi|417219907|ref|ZP_12024136.1| DNA-formamidopyrimidine glycosylase [Escherichia coli JB1-95]
gi|419205784|ref|ZP_13748939.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC8B]
gi|378043795|gb|EHW06225.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DEC8B]
gi|386192818|gb|EIH87132.1| DNA-formamidopyrimidine glycosylase [Escherichia coli JB1-95]
Length = 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|331685298|ref|ZP_08385884.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299]
gi|450194488|ref|ZP_21892411.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli SEPT362]
gi|331077669|gb|EGI48881.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299]
gi|449316719|gb|EMD06827.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Escherichia coli SEPT362]
Length = 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|282857884|ref|ZP_06267090.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens
W5455]
gi|282584266|gb|EFB89628.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens
W5455]
Length = 294
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + G++I K + + VI + DF V G+A+ R+GK
Sbjct: 1 MPELPEVEMVKNVTAPQIRGRRIEK-VALERRDVIAHPAPDDFVELVTGRAVTGMGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L LD MTG + + E+P+ K+++ L L+
Sbjct: 60 FLRFFLDDGAEMVLHLRMTGRLLVV--------------PPEFPAEKHTRAVFSLSGRLQ 105
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D RRF + LL + +LGP+ +T + L + +K LLDQ
Sbjct: 106 LRFADLRRFGRFWLLQKGEKDCTGMDKLGPEPFDAGLTSVWLKERLGASRRAVKTCLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGN DE+L+ A+I P + A SLS+ L + I+EV
Sbjct: 166 RVVAGIGNIYGDEILFAARIRPTRAASSLSRPEWERLTRAIREV 209
>gi|114567528|ref|YP_754682.1| DNA-formamidopyrimidine glycosylase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|122317553|sp|Q0AVE3.1|FPG_SYNWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|114338463|gb|ABI69311.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 268
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-DNKVIDGVSASDFEASVL-GKAILSAHRK 58
MPELPEVE + ++E I+ I + + + D + D+ L G+ I A R+
Sbjct: 1 MPELPEVETIKNNLQE------ILPLRIKELEIRREDILRCRDYALEELTGQIIEEASRR 54
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L +D+ F F GM+G +YI+ T + + + LD L
Sbjct: 55 GKYLILAVDNGLFLVFHLGMSGRLYIQEEETTVLE------------PHVHVIIHLDKRL 102
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+L + D RRF + LL D S LG + L E L ++ IK LLL+Q
Sbjct: 103 KLLYQDARRFGGLWLLKDTQCF--FSRLGKEPLSEEFCPRYLEQVLQGRQTAIKNLLLNQ 160
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ ISGIGN ADE L+ A I P + A SLS L IKEV
Sbjct: 161 NLISGIGNIYADEALFMAGIRPDRQAASLSVREIEGLCCGIKEV 204
>gi|229163578|ref|ZP_04291527.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803]
gi|228619828|gb|EEK76705.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803]
Length = 276
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GKKI ++ V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVVVTYPKIVKRPDDAEIFKEMLKGETIENVKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPKYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL++E + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREASSLTEEEIERVYEAI 207
>gi|449926841|ref|ZP_21800954.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 4SM1]
gi|449966394|ref|ZP_21812340.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 15VF2]
gi|449160236|gb|EMB63513.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 4SM1]
gi|449170158|gb|EMB72890.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 15VF2]
Length = 272
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQIFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|116630047|ref|YP_815219.1| formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri ATCC
33323]
gi|238853765|ref|ZP_04644131.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4]
gi|282851274|ref|ZP_06260639.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1]
gi|122273016|sp|Q041U1.1|FPG_LACGA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|116095629|gb|ABJ60781.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Lactobacillus gasseri ATCC 33323]
gi|238833574|gb|EEQ25845.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4]
gi|282557242|gb|EFB62839.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1]
Length = 276
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K I +++ ++F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVN--DPAEFVKKLTNKRILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G ++ DT + ++ +F DG L
Sbjct: 59 YLLFRFNDDLTMVSHLRMEGKYHL-----------VSPDTPKGKHEHVEFI--FTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ + F D+LS+KK IK LLDQ
Sbjct: 106 RYDDVRKFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+++KIHPL +A ++ + L + I
Sbjct: 166 TIVCGLGNIYVDEVLWKSKIHPLSSAKAIPADKVKNLYQNINHT 209
>gi|421777574|ref|ZP_16214168.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AD30]
gi|408457338|gb|EKJ81135.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AD30]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|168464966|ref|ZP_02698858.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418761417|ref|ZP_13317561.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765402|ref|ZP_13321487.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418770246|ref|ZP_13326269.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|419789843|ref|ZP_14315520.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|195632352|gb|EDX50836.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392614670|gb|EIW97115.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392737615|gb|EIZ94769.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392740305|gb|EIZ97426.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392740418|gb|EIZ97538.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPTEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|72080906|ref|YP_287964.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 7448]
gi|71914030|gb|AAZ53941.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae 7448]
Length = 275
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 23/245 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVVTVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFAK--VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSLQFYK 234
ISG+GN ADEV + KI P + A +S++ ++ K ++E + G S+ Y
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIYFSKKILQESIKLGGSSISSYT 223
Query: 235 CYFAK 239
AK
Sbjct: 224 SLNAK 228
>gi|419879396|ref|ZP_14400831.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9534]
gi|419881008|ref|ZP_14402362.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9545]
gi|420111770|ref|ZP_14621591.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9553]
gi|388332106|gb|EIK98799.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9534]
gi|388366593|gb|EIL30317.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9545]
gi|394397858|gb|EJE74088.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9553]
Length = 270
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 2 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 59 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 105 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 165 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 206
>gi|293463959|ref|ZP_06664373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088]
gi|415838617|ref|ZP_11520586.1| formamidopyrimidine-DNA glycosylase [Escherichia coli RN587/1]
gi|417146681|ref|ZP_11987528.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 1.2264]
gi|417281750|ref|ZP_12069050.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3003]
gi|417669135|ref|ZP_12318673.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_O31]
gi|425280044|ref|ZP_18671261.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ARS4.2123]
gi|291321591|gb|EFE61027.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088]
gi|323189457|gb|EFZ74738.1| formamidopyrimidine-DNA glycosylase [Escherichia coli RN587/1]
gi|386162621|gb|EIH24417.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 1.2264]
gi|386246079|gb|EII87809.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 3003]
gi|397783228|gb|EJK94088.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_O31]
gi|408197891|gb|EKI23138.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ARS4.2123]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4]
gi|302433947|gb|EFL05763.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4]
Length = 286
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ + + D + A+DF + G AI +A R+G
Sbjct: 1 MPELPEVETVRAGLEAHVAGRTVRAVEVLHDRAIRRHAQGAADFTGRLAGVAIEAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + ++ K V+ +F D G E
Sbjct: 61 KYLWLELSDGEAVLAHLGMSGQMLVQPEGAPDEKHLRVR---------VRF---ADGGPE 108
Query: 120 LSFTDKRRFAKVRL----LNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L + D S+P I+ + D + + +L ++ +K
Sbjct: 109 LRFVDQRTFGGLALDELVVVDGDSLPGTIAHIARDPMDPKFDPEAAVRALRSRRTEVKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQ+ +SG+GN ADE L+++K+H + L+ TLL +V A
Sbjct: 169 LLDQTLVSGVGNIYADEALWRSKLHWSRPTEKLTAAQGRTLLSAASDVMSA 219
>gi|300939234|ref|ZP_07153914.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1]
gi|432682464|ref|ZP_19917820.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE143]
gi|300455876|gb|EFK19369.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1]
gi|431217438|gb|ELF15017.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE143]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLYQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|71083113|ref|YP_265832.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062226|gb|AAZ21229.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 287
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 1 MPELPEVEAARRAIE---EHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE ++++ EH I N+ + FE + K I R
Sbjct: 1 MPELPEVEIVKQSLSKKLEH-----KKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIY-IKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD- 115
K L L F GM+G ++ IK ++++ ++ ++ P K++ VE+
Sbjct: 56 FSKYLILNFSDQSFCLIHLGMSGTVHLIKKNNISKFTNTSFYNSPSLPKKHNH--VEIHF 113
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
GL + + D RRF + + + + S LGP+ + ++ + KK IK+
Sbjct: 114 KGLRVIYNDPRRFGFFKFIENKKELEKRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ ++SGIGN A E+L+ KI+P+ A L+K+ C ++ K V
Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQDCKKIITYSKSV 221
>gi|16762583|ref|NP_458200.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144072|ref|NP_807414.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415616|ref|YP_152691.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|168235331|ref|ZP_02660389.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168818444|ref|ZP_02830444.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194734471|ref|YP_002116661.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197263131|ref|ZP_03163205.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364543|ref|YP_002144180.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|204928552|ref|ZP_03219751.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354672|ref|YP_002228473.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858963|ref|YP_002245614.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213161284|ref|ZP_03346994.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425232|ref|ZP_03357982.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213615651|ref|ZP_03371477.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|289824124|ref|ZP_06543721.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|375003586|ref|ZP_09727925.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375121204|ref|ZP_09766371.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|378957419|ref|YP_005214906.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|378961958|ref|YP_005219444.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|409247412|ref|YP_006888111.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|417329661|ref|ZP_12114453.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|417353123|ref|ZP_12130146.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417386668|ref|ZP_12151305.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|417514375|ref|ZP_12178193.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|417534828|ref|ZP_12188482.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|418777793|ref|ZP_13333719.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418781862|ref|ZP_13337737.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784966|ref|ZP_13340800.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418804020|ref|ZP_13359631.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419794636|ref|ZP_14320245.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421370751|ref|ZP_15820914.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421378347|ref|ZP_15828435.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421382954|ref|ZP_15832999.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421400766|ref|ZP_15850651.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421406961|ref|ZP_15856771.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414458|ref|ZP_15864202.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418882|ref|ZP_15868582.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421421098|ref|ZP_15870773.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421432469|ref|ZP_15882041.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421443571|ref|ZP_15893012.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421448553|ref|ZP_15897946.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436612003|ref|ZP_20513944.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436775873|ref|ZP_20521007.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436803458|ref|ZP_20525888.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|437136329|ref|ZP_20679794.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437150789|ref|ZP_20688848.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161355|ref|ZP_20695391.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437174764|ref|ZP_20702351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184041|ref|ZP_20708039.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437262834|ref|ZP_20719164.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437291553|ref|ZP_20731617.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437331865|ref|ZP_20742054.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437344373|ref|ZP_20746281.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437373047|ref|ZP_20749535.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437753513|ref|ZP_20834037.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437814111|ref|ZP_20842233.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437834814|ref|ZP_20845121.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437926202|ref|ZP_20850941.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438040984|ref|ZP_20855725.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438091737|ref|ZP_20861142.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438097240|ref|ZP_20862256.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438115349|ref|ZP_20870472.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438143424|ref|ZP_20875352.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445133181|ref|ZP_21382477.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445143065|ref|ZP_21386346.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445149169|ref|ZP_21388994.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445175115|ref|ZP_21397246.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445186232|ref|ZP_21399144.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445233076|ref|ZP_21406294.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445275117|ref|ZP_21410532.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445325022|ref|ZP_21412483.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445345892|ref|ZP_21418494.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445356507|ref|ZP_21421792.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452122480|ref|YP_007472728.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|21362542|sp|Q8Z2H2.3|FPG_SALTI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|81677677|sp|Q5PC09.3|FPG_SALPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238689781|sp|B4TZX7.1|FPG_SALSV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238690465|sp|B5R5F9.1|FPG_SALEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238690539|sp|B5RGF2.1|FPG_SALG2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238690753|sp|B5BI09.1|FPG_SALPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|25289586|pir||AG0971 formamidopyrimidine-DNA glycosylase STY4068 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504888|emb|CAD03267.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139709|gb|AAO71274.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129873|gb|AAV79379.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194709973|gb|ACF89194.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197096020|emb|CAR61607.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197241386|gb|EDY24006.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197291486|gb|EDY30838.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204321985|gb|EDZ07183.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274453|emb|CAR39485.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205344433|gb|EDZ31197.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206710766|emb|CAR35127.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|320088146|emb|CBY97908.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326625471|gb|EGE31816.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|353074501|gb|EHB40262.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353564335|gb|EHC30437.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353564578|gb|EHC30613.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353602648|gb|EHC57959.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353634027|gb|EHC80700.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353657971|gb|EHC98284.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|357208030|gb|AET56076.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|374355830|gb|AEZ47591.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|392614210|gb|EIW96659.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392743250|gb|EJA00324.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392745627|gb|EJA02651.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392753141|gb|EJA10079.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392771852|gb|EJA28564.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|395996856|gb|EJI05900.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395996972|gb|EJI06015.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396006035|gb|EJI15006.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396023070|gb|EJI31872.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396032436|gb|EJI41159.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396036500|gb|EJI45160.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396037262|gb|EJI45912.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043344|gb|EJI51948.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396050195|gb|EJI58727.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396070253|gb|EJI78582.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073207|gb|EJI81513.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434939377|gb|ELL46199.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434956602|gb|ELL50331.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434961297|gb|ELL54611.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434969300|gb|ELL62012.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|435136150|gb|ELN23242.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435145306|gb|ELN32125.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435145476|gb|ELN32288.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435157432|gb|ELN43884.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435161409|gb|ELN47637.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435161912|gb|ELN48125.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435181747|gb|ELN66800.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435188661|gb|ELN73350.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435190809|gb|ELN75384.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435206052|gb|ELN89613.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435296039|gb|ELO72462.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435300984|gb|ELO77041.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435311336|gb|ELO85521.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435312848|gb|ELO86667.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435315678|gb|ELO88903.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435322522|gb|ELO94794.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435327044|gb|ELO98820.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435328268|gb|ELO99846.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444848052|gb|ELX73185.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444848792|gb|ELX73913.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444858464|gb|ELX83450.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444858666|gb|ELX83645.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444861599|gb|ELX86473.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444869658|gb|ELX94229.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444878826|gb|ELY02940.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444881835|gb|ELY05844.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444886985|gb|ELY10721.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444887729|gb|ELY11418.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451911484|gb|AGF83290.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|291614819|ref|YP_003524976.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus
ES-1]
gi|291584931|gb|ADE12589.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus
ES-1]
Length = 271
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 28/265 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H ++IV +I N + + + G + R+ K
Sbjct: 1 MPELPEVETTLRGIAPHLKQRRIVDVVIR--NPDLRWPIPGNLPELLRGHIVQDLQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + GM+G++ I+ + D K+ F + +D+G L
Sbjct: 59 YLLISFGHGTL-ILHLGMSGSLRIQPL-------------DTSAEKHDHFDLVMDNGQLL 104
Query: 121 SFTDKRRFAKVRL-LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
D RRF V D P ++ LGP+ LL D + K+K IK +++D
Sbjct: 105 RLRDPRRFGAVLWHQGDVAQHPLLASLGPEPLLAGFDADTLYAATRKRKAAIKLVIMDNH 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREAL----GVSLQFY-- 233
+ G+GN A+E L++A I P A +SKE CA L IKEV A G SL+ Y
Sbjct: 165 VVVGVGNIYANEALFRAGIRPQLAAGKISKERCARLTVTIKEVLRAAIRKGGSSLRDYVD 224
Query: 234 ----KCYFAKPYVHKKHRENKICRL 254
+ YF + Y R + CR+
Sbjct: 225 SNGKQGYFQQHYF-AYGRTGEPCRV 248
>gi|229169312|ref|ZP_04297022.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621]
gi|423489749|ref|ZP_17466431.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BtB2-4]
gi|423495472|ref|ZP_17472116.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus CER057]
gi|423497733|ref|ZP_17474350.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus CER074]
gi|423512685|ref|ZP_17489216.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus HuA2-1]
gi|423591441|ref|ZP_17567472.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VD048]
gi|423598121|ref|ZP_17574121.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VD078]
gi|423660571|ref|ZP_17635740.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM022]
gi|423670150|ref|ZP_17645179.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM034]
gi|423673643|ref|ZP_17648582.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM062]
gi|228614075|gb|EEK71190.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621]
gi|401150379|gb|EJQ57838.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus CER057]
gi|401162213|gb|EJQ69571.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus CER074]
gi|401232809|gb|EJR39307.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VD048]
gi|401237582|gb|EJR44033.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VD078]
gi|401297510|gb|EJS03119.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM034]
gi|401302479|gb|EJS08058.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM022]
gi|401310508|gb|EJS15824.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus VDM062]
gi|402431040|gb|EJV63112.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BtB2-4]
gi|402447609|gb|EJV79459.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus HuA2-1]
Length = 276
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I +I V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL++E + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREAASLTEEEIERIYEAI 207
>gi|421360136|ref|ZP_15810422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363718|ref|ZP_15813958.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421368682|ref|ZP_15818867.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421387244|ref|ZP_15837249.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391948|ref|ZP_15841913.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396418|ref|ZP_15846346.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421405408|ref|ZP_15855242.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421427619|ref|ZP_15877238.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421437694|ref|ZP_15887210.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441694|ref|ZP_15891159.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|436808108|ref|ZP_20527745.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436812533|ref|ZP_20530964.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436845693|ref|ZP_20538931.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436853641|ref|ZP_20543469.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436855202|ref|ZP_20544511.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436866516|ref|ZP_20552033.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436869378|ref|ZP_20553594.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436882578|ref|ZP_20561332.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889688|ref|ZP_20565402.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436894894|ref|ZP_20568098.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436904792|ref|ZP_20574753.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914025|ref|ZP_20579227.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436921570|ref|ZP_20583871.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928637|ref|ZP_20587874.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436934624|ref|ZP_20590584.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436941601|ref|ZP_20595107.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436953025|ref|ZP_20601490.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965339|ref|ZP_20606585.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436967718|ref|ZP_20607472.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436978282|ref|ZP_20612424.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436988131|ref|ZP_20616134.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437003050|ref|ZP_20621476.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437013925|ref|ZP_20625286.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437032674|ref|ZP_20632054.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043919|ref|ZP_20636993.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437051291|ref|ZP_20641262.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437057238|ref|ZP_20644513.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063943|ref|ZP_20648258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437078102|ref|ZP_20655948.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082647|ref|ZP_20658489.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437095935|ref|ZP_20664733.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437114817|ref|ZP_20669201.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437119816|ref|ZP_20671063.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129899|ref|ZP_20676355.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437148192|ref|ZP_20687360.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437169749|ref|ZP_20699962.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437254103|ref|ZP_20715560.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437271368|ref|ZP_20723632.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437274035|ref|ZP_20725066.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437304252|ref|ZP_20733965.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437430578|ref|ZP_20755781.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437449619|ref|ZP_20759358.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437464168|ref|ZP_20763531.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437479468|ref|ZP_20767981.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437491109|ref|ZP_20771335.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437506709|ref|ZP_20775898.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437530520|ref|ZP_20780621.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437560202|ref|ZP_20785970.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437572905|ref|ZP_20789329.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437585907|ref|ZP_20793098.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605901|ref|ZP_20799524.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620163|ref|ZP_20803949.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437646727|ref|ZP_20809072.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437661326|ref|ZP_20812936.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437677702|ref|ZP_20817368.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437697463|ref|ZP_20822952.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437709195|ref|ZP_20826053.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437724215|ref|ZP_20829575.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|395982825|gb|EJH92022.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395983770|gb|EJH92961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395985748|gb|EJH94914.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|396009644|gb|EJI18568.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396010022|gb|EJI18936.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396010384|gb|EJI19297.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396024093|gb|EJI32883.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396049832|gb|EJI58370.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396050876|gb|EJI59395.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396063291|gb|EJI71690.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434967858|gb|ELL60641.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434976104|gb|ELL68361.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434978307|gb|ELL70347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434983751|gb|ELL75532.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434993146|gb|ELL84584.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434994143|gb|ELL85516.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435003054|gb|ELL94092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435003277|gb|ELL94297.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435007273|gb|ELL98127.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435015476|gb|ELM06004.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435017605|gb|ELM08095.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435023825|gb|ELM14065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435025238|gb|ELM15407.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435034422|gb|ELM24305.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435040666|gb|ELM30421.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435044822|gb|ELM34490.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435047316|gb|ELM36910.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435048688|gb|ELM38246.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435061038|gb|ELM50275.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435070202|gb|ELM59198.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435072539|gb|ELM61446.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435073275|gb|ELM62153.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435078722|gb|ELM67443.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435082021|gb|ELM70647.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435086218|gb|ELM74762.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435092517|gb|ELM80873.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435095728|gb|ELM84013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435101610|gb|ELM89755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435102104|gb|ELM90219.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435109268|gb|ELM97222.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435109399|gb|ELM97352.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435115698|gb|ELN03459.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126254|gb|ELN13658.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435128738|gb|ELN16065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435133090|gb|ELN20271.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435148136|gb|ELN34872.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435158598|gb|ELN44986.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435169842|gb|ELN55600.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435176795|gb|ELN62161.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435188378|gb|ELN73095.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435198986|gb|ELN83106.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435208966|gb|ELN92351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435217656|gb|ELO00072.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435219773|gb|ELO02104.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435229604|gb|ELO10963.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435234344|gb|ELO15209.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435238706|gb|ELO19331.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435244094|gb|ELO24326.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435247269|gb|ELO27240.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435256525|gb|ELO35829.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257854|gb|ELO37132.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435260469|gb|ELO39664.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435268769|gb|ELO47349.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435271461|gb|ELO49923.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435274942|gb|ELO53036.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435276055|gb|ELO54080.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435290149|gb|ELO67091.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435293344|gb|ELO70048.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
Length = 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|420099169|ref|ZP_14610411.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9455]
gi|424763487|ref|ZP_18190958.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CFSAN001630]
gi|394423580|gb|EJE96814.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CVM9455]
gi|421939844|gb|EKT97347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase, partial [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 271
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 3 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 60 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 106 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 165
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 166 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 207
>gi|257865987|ref|ZP_05645640.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC30]
gi|257872320|ref|ZP_05651973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC10]
gi|257799921|gb|EEV28973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC30]
gi|257806484|gb|EEV35306.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC10]
Length = 280
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEYFESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY 233
++G+GN DE L+QA+IHP Q A SL+ L + I +V EA G +++ Y
Sbjct: 166 KLVTGLGNIYVDEALWQAEIHPEQPADSLTPAEANVLHQAIIDVLERAVEAGGTTIRTY 224
>gi|334341037|ref|YP_004546017.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum ruminis DSM
2154]
gi|334092391|gb|AEG60731.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum ruminis DSM
2154]
Length = 277
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE R++E++ G I I K+I F ++GK IL R+G
Sbjct: 1 MPELPEVETVVRSLEKNLAGLTITGVDIFMP-KIIRSPKPEIFTEQIVGKQILKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + L MTG R + K++ L++
Sbjct: 60 KYLLIHLSHHVTLVVHLRMTG-------------RLVYCEAGTPLEKHTHVVFHLNNDTM 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L FTD R+F ++ L+ + + + + LG + L T + L +K+ IK LLLD
Sbjct: 107 LKFTDIRQFGRMLLVPTDQLSEITGLKNLGLEPLDPSFTREFLKKELRRKRTRIKPLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +I+G+GN ADEVL+QAK+HP + A+ LS + L + I E+
Sbjct: 167 QYFIAGLGNIYADEVLFQAKVHPERLALDLSTREVSGLHRAIVEI 211
>gi|284032687|ref|YP_003382618.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836]
gi|283811980|gb|ADB33819.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836]
Length = 284
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 15/232 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + + G+ I + V ++ DF AS+ G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLADFTTGRTIDAVEVLHPRPVRRHLAGPDDFAASLKGQTFAAPARRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L S GM+G ++ V K ++ F DDG E
Sbjct: 61 KYLWLPLRSGDAVLAHLGMSGQFRVQPVGAPDEKHLRIR------------FRFADDGGE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ F D+R F + +P I+ + D +D F + ++K +K LLDQ
Sbjct: 109 VRFLDQRMFGGLSYSEGGAELPGEIAHIARDPFDPLFDLDAFVAGIRRRKTGLKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REALGVS 229
+ +SG+GN ADE L++AK+H + +L +L + V EAL V
Sbjct: 169 TLVSGVGNIYADEALWRAKLHYAKATETLKPLQAREILGHARAVMSEALDVG 220
>gi|401887317|gb|EJT51307.1| hypothetical protein A1Q1_07488 [Trichosporon asahii var. asahii
CBS 2479]
Length = 806
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 111/233 (47%), Gaps = 26/233 (11%)
Query: 5 PEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDF-----EASVLGKAILSAHRKG 59
PEVE ARR I E C G I K+ +D V DG S +F E+S L A+ K
Sbjct: 19 PEVERARRLIAETCTGYTIGKAETYEDTIVYDGASHDEFDVNARESSSSHTFNLEANFKI 78
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-----SAVKDTDEWPSKYSKFFVEL 114
+ R P + + G T Y+R V WP K + V
Sbjct: 79 LDYSFRRRQIP----SYALRHDRNDPGQEPTWYRRKVNLGEGVDGALLWPPKLTPPDVA- 133
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+ EL+F D RR ++RL+ DP S PP+S LG D +L ++DEF L K+ T+K
Sbjct: 134 GEARELAFLDPRRLGRLRLVPDPVLSHPPLSLLGFDPVLSHPSLDEFKGLLENKRGTVKG 193
Query: 174 LLLDQSYISGIGNWVADEVL-------YQAKI---HPLQTAVSLSKESCATLL 216
L++DQ++ +G+GNWVADE + +Q+ + HP S S+ S + L
Sbjct: 194 LIMDQAFSAGVGNWVADECVPRIVLADWQSPLPSAHPPAAPDSGSRRSADSAL 246
>gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVTTPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + D + SK++ +D EL
Sbjct: 60 FLLFDLTNCTIMS-HLRMEGKFRLM-------------DEKDEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGENETRSIKKLGPEPLTNTFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
++GIGN ADE+ ++AK+ P + A SLS
Sbjct: 166 KLVAGIGNIYADEICFEAKVQPERPANSLS 195
>gi|428207132|ref|YP_007091485.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Chroococcidiopsis thermalis PCC 7203]
gi|428009053|gb|AFY87616.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Chroococcidiopsis thermalis PCC 7203]
Length = 309
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 37/255 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + ++I + D + S +DF + GKAI HR+GK
Sbjct: 1 MPELPEVETVRRGANQVTLNREITGGDVLLDRTIAYPFSVADFLNGISGKAIAQWHRRGK 60
Query: 61 NLWLRL--------------------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT 100
L L S P+ +F + + ++ GV + +
Sbjct: 61 YLLAELVKGSREQGAIPSCKSQVASRKSQLIPNSEFRIPNSEFL-GVHLRMTGQLLWLPQ 119
Query: 101 DEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP----------ISELGPDA 150
DE K+++ + L + EL F D+R F ++ VPP ++ LGPD
Sbjct: 120 DEPLHKHTRVRLFLAENWELRFVDQRTFGQMWW------VPPERVVESVVTGLATLGPDP 173
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
+V+ F L ++ IK LLDQS ++GIGN ADE L++A + P L
Sbjct: 174 FSSDFSVEYFATKLRDRRRPIKNALLDQSIVAGIGNIYADEALFRAGVQPQTLCADLRSP 233
Query: 211 SCATLLKCIKEVREA 225
+ L I EV EA
Sbjct: 234 QISRLRTAILEVLEA 248
>gi|311110325|ref|ZP_07711722.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22]
gi|311065479|gb|EFQ45819.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22]
Length = 254
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K I +++ ++F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVN--DPAEFVKKLTNKRILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G ++ DT + ++ +F DG L
Sbjct: 59 YLLFRFNDDLTMVSHLRMEGKYHL-----------VSPDTPKGKHEHVEFI--FTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ + F D+LS+KK IK LLDQ
Sbjct: 106 RYDDVRKFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+++KIHPL +A ++ + L + I
Sbjct: 166 TIVCGLGNIYVDEVLWKSKIHPLSSAKAIPADKVKNLYQNINHT 209
>gi|161505738|ref|YP_001572850.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|189044673|sp|A9MKN9.1|FPG_SALAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|160867085|gb|ABX23708.1| hypothetical protein SARI_03914 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEAQPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +K+K IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKRKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLSKE C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSKEECDLLARVIKAV 205
>gi|374293505|ref|YP_005040540.1| Formamidopyrimidine-DNA glycosylase [Azospirillum lipoferum 4B]
gi|357425444|emb|CBS88331.1| Formamidopyrimidine-DNA glycosylase [Azospirillum lipoferum 4B]
Length = 280
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 26/243 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + H G+++V+ + + F + G+ + S R+ K
Sbjct: 1 MPELPEVETVCRGLAPHLEGRRLVR--VEQRRPNLRTPFPPRFCERLTGRRVESVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + LD GM+G + I A + D + K+ E D G +
Sbjct: 59 YILMHLDDGGVLIAHLGMSGRMII-----------APERPDAF-DKHDHVVFETDAGTIV 106
Query: 121 SFTDKRRFAKVRL-----LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
+F D RRF + L L D P + LGP+ L + E L+ K IKA L
Sbjct: 107 TFNDARRFGLMDLTVADALGDH---PMLRNLGPEPLGNEFSGPELARRLAGKITPIKAAL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQ 231
LDQS ++G+GN E L+Q+ I P ++A SLS E L ++EV E A G SL+
Sbjct: 164 LDQSVVAGLGNIYVSEALFQSGILPTRSAASLSAEEVDRLAAAVREVLERAIAAGGSSLR 223
Query: 232 FYK 234
Y+
Sbjct: 224 DYR 226
>gi|375125561|ref|ZP_09770725.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|326629811|gb|EGE36154.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 19 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 75
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 76 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 121
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 122 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 181
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 182 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 223
>gi|443626249|ref|ZP_21110677.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
gi|443340309|gb|ELS54523.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
Length = 268
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 22/212 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE R ++ C ++++ + D V+ GVSA ++ G+ I A R+GK
Sbjct: 1 MPELPDVEGFRNVLQS-CAQGRVIRRVEVRDTGVLHGVSAPRLRDALEGRRITRAERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P + FGMTG + A D P F V D +L
Sbjct: 60 WLLAHTGGPTL-ALHFGMTGRLLC-----------AHPDDAADPHDRVLFTVARDR--QL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVD--EFTDSLSKKKITIKALLLD 177
+ D+R+ + L + + + + GPDAL TVD EF +L+ + +KA+L+D
Sbjct: 106 RYRDQRKLQGLWLAENHSDIARLLRNQGPDAL----TVDREEFETALASHRGRVKAVLID 161
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
QS ++G+GN +ADE+L++A + P A +L++
Sbjct: 162 QSVLAGLGNLLADEILWRAGLRPTTPANALTE 193
>gi|417915223|ref|ZP_12558844.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
SK95]
gi|342835337|gb|EGU69588.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
SK95]
Length = 274
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 24/246 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEIAYPKMI--KTDLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L + S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTNKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLTPDLLEAYFVSKKLGPEPSEQDFDLQVFQIALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q+ ++G+GN DEVL++A++HP + + SL+ E + + + + + E G +++ Y
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQSLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 234 KCYFAK 239
F +
Sbjct: 224 TNAFGE 229
>gi|161616806|ref|YP_001590771.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|189044674|sp|A9MVN0.1|FPG_SALPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|161366170|gb|ABX69938.1| hypothetical protein SPAB_04625 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|449910034|ref|ZP_21794497.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans OMZ175]
gi|449972120|ref|ZP_21814665.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 2VS1]
gi|450030138|ref|ZP_21833080.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans G123]
gi|450056409|ref|ZP_21842026.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML4]
gi|450067478|ref|ZP_21846665.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML9]
gi|450160520|ref|ZP_21880065.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 66-2A]
gi|450164802|ref|ZP_21881524.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans B]
gi|449171174|gb|EMB73849.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 2VS1]
gi|449193267|gb|EMB94656.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans G123]
gi|449206779|gb|EMC07472.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML4]
gi|449208037|gb|EMC08673.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML9]
gi|449239895|gb|EMC38595.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 66-2A]
gi|449241342|gb|EMC39975.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans B]
gi|449260446|gb|EMC57946.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans OMZ175]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|350552789|ref|ZP_08921982.1| Formamidopyrimidine-DNA glycosylase [Thiorhodospira sibirica ATCC
700588]
gi|349792906|gb|EGZ46751.1| Formamidopyrimidine-DNA glycosylase [Thiorhodospira sibirica ATCC
700588]
Length = 272
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + IG++I+ + N + A D +++ G+ I + R+ K
Sbjct: 1 MPELPEVETTRRGIAPYLIGRRIIGVTV--RNPRLRWPIAPDLASTLCGQRIHAVTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D+ GM+G++ I A YK+ D +W L+D + +
Sbjct: 59 YLLLAADTGQL-LLHLGMSGSLRISTPA-QAYKK---HDHVQW---------HLEDDIAM 104
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
D RRF V L+ S P ++ LGP+ L + + I IK L++
Sbjct: 105 RLHDPRRFGCVLWLSGEHSATHPLLAGLGPEPLEDVFDAAYLYHYTRSRIIPIKVLIMQA 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
+ G+GN A E L+ A I P A LSK CA L+ IK V +A
Sbjct: 165 RCVVGVGNIYASESLFMAGIRPGTAAARLSKARCARLVTAIKTVLQA 211
>gi|213029143|ref|ZP_03343590.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 220
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|450114921|ref|ZP_21863612.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans ST1]
gi|449228602|gb|EMC27962.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans ST1]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|284044548|ref|YP_003394888.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684]
gi|283948769|gb|ADB51513.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684]
Length = 284
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G+ +V + D + + S ++ A ++G+ I HR+GK
Sbjct: 1 MPELPEVETVRRQLEPRLVGRTLVAYAVRD-ARWTEPRSPNEVVAPLVGRRIEGFHRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + F MTG + T Y R+ DDG +L
Sbjct: 60 YLIWEAEDELFLLIHLRMTGNLLYDAPEGTLYTRAHFG---------------FDDGHDL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI--SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF LL + + + LG + + T + + IKA LLDQ
Sbjct: 105 RFVDPRRFGTGWLLAGQSELDAYLDARLGVEPFSDGFTAEHLRRLARGSRAPIKAFLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTA 204
I+GIGN ADE L++++IHPL+ A
Sbjct: 165 KRIAGIGNIYADEALFRSRIHPLRQA 190
>gi|320547275|ref|ZP_08041567.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC
9812]
gi|320448079|gb|EFW88830.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC
9812]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 108/232 (46%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G+KIV SI K+I + FE ++G+ S R GK
Sbjct: 1 MPELPEVETVRRGLERLIVGRKIV-SIDVRVPKMIK-TDLTAFETDIIGQTFQSIGRCGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L LD S M G + DE P +K+ F +LD+G
Sbjct: 59 YLLLNLDRQVIIS-HLRMEGKYLLF--------------EDEVPENKHFHTFFKLDNGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE--LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL + LGP+ + F L K IK LLD
Sbjct: 104 LVYQDVRKFGTMDLLEKEQVADYFRQRKLGPEPTETAFDLATFAKQLKASKKVIKPYLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREALGVS 229
Q+ + G+GN DE L+ AKIHP +T+ SLS + L I + + LG++
Sbjct: 164 QTLVVGLGNIYVDEALWAAKIHPKRTSDSLSDSEISLLRDSIIRILQ-LGIA 214
>gi|198241869|ref|YP_002217687.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|238690332|sp|B5FM59.1|FPG_SALDC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|197936385|gb|ACH73718.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDKIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|91762461|ref|ZP_01264426.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718263|gb|EAS84913.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 1 MPELPEVEAARRAIE---EHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE ++++ EH I N+ + FE + K I R
Sbjct: 1 MPELPEVEIVKQSLSKKLEH-----KKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIY-IKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD- 115
K L L F GM+G ++ IK + ++ ++ ++ P K++ VE+
Sbjct: 56 FSKYLILNFSDQSFCLIHLGMSGTVHLIKKNNINKFTNTSFYNSPSLPKKHNH--VEIHF 113
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
GL + + D RRF + + + + S LGP+ + ++ + KK IK+
Sbjct: 114 KGLRVIYNDPRRFGFFKFIENKKELEKRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
LLDQ ++SGIGN A E+L+ KI+P+ A L+K+ C ++ K V
Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQDCKKIITYSKSV 221
>gi|451967207|ref|ZP_21920452.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda NBRC
105688]
gi|451313925|dbj|GAC65814.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda NBRC
105688]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR I H GK ++ ++ +++ V + ++ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIAPHLTGK-MIDRLVVRQSRLRWPVPEALL--ALHDRPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + K+ + L DG+ L
Sbjct: 58 YLLLELPEG-WIVIHLGMSGSVRILSASTPA-------------QKHDHIDLRLTDGMCL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D + ++ LGP+ L + + ++ +K L+D
Sbjct: 104 RYTDPRRFGAWLWYEDLATASVLAHLGPEPLSDAFNAAYLLEKARGRRTAVKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A+IHP + A SLS++ A L++ IK V
Sbjct: 164 VVGVGNIYASESLFSAQIHPDRLAGSLSRDEIALLVQTIKAV 205
>gi|387930084|ref|ZP_10132761.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus methanolicus PB1]
gi|387586902|gb|EIJ79226.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus methanolicus PB1]
Length = 274
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + K+I + + F+ +++G+ I+ R+GK
Sbjct: 1 MPELPEVETIRRTLIKLVLHKQIDHVSVFWPKMIKHPEEVEQFKDALIGQTIVQIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + + + ++G R + ++ K++ DG EL
Sbjct: 61 LLI-------FYTNDYALVSHLRMEG-------RYTLFSKNDPIEKHTHIIFHFSDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L T P+++LGP+ + T+ + L K +K LLDQ
Sbjct: 107 RYKDVRKFGTMHLYKKGTEFHFSPLNQLGPEPFSDSFTISALAEKLGKTNRKVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ G+GN DE L++AKIHP + A SL++E L + I
Sbjct: 167 KIVVGLGNIYVDEALFRAKIHPERAANSLTREEIERLHREI 207
>gi|417725642|ref|ZP_12374423.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-304]
gi|333012914|gb|EGK32291.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-304]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKQ 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|213855126|ref|ZP_03383366.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 250
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|227524688|ref|ZP_03954737.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii
ATCC 8290]
gi|227088172|gb|EEI23484.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii
ATCC 8290]
Length = 280
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 29/256 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK---DTDEWP-SKYSKFFVELDD 116
L++R+++ G+ + + R K + + P SK++ L D
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGKYDVEPEGTPLSKHTHIVFHLTD 101
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 102 GRQLRYNDTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPF 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC-IKEVREAL---GVSL 230
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I E++ A+ G ++
Sbjct: 162 LLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVVELKLLRKSIIDEIKRAIDGHGTTV 221
Query: 231 QFYKCYFAKPYVHKKH 246
Y + + + H
Sbjct: 222 HSYSNAYGEAGNFQNH 237
>gi|450071127|ref|ZP_21847982.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M2A]
gi|449212752|gb|EMC13104.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans M2A]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNDKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|254784434|ref|YP_003071862.1| formamidopyrimidine-DNA glycosylase [Teredinibacter turnerae T7901]
gi|259647151|sp|C5BLG1.1|FPG_TERTT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|237685174|gb|ACR12438.1| DNA-formamidopyrimidine glycosylase [Teredinibacter turnerae T7901]
Length = 272
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK--VIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR I H + I + ID + + G+ ++ A R+
Sbjct: 1 MPELPEVETTRRGIAPHILHHPITAVTLRHTQLRWPIDKALSRNLP----GRTLVRADRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L L +D + GM+G++ I V+ T E P K+ + G
Sbjct: 57 GKYLLLAVDDGRTLIWHLGMSGSLRI------------VEPT-EPPGKHDHIDLRFAHGR 103
Query: 119 ELSFTDKRRF-AKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D RRF A + +DP I LGP+ L + + + K+ +K+ ++D
Sbjct: 104 VLRYHDPRRFGAFLATADDPAQHALICHLGPEPLTDDFNGEYLYERSRKRSTAVKSWIMD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ AKIHPL+ A L++ +C L IK V
Sbjct: 164 SRVVVGVGNIYANESLFLAKIHPLRAAGKLTRPACHRLADIIKAV 208
>gi|450127731|ref|ZP_21868707.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U2A]
gi|449230351|gb|EMC29613.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans U2A]
Length = 273
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLARQLKK 195
>gi|406586431|ref|ZP_11061362.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD1S]
gi|419813652|ref|ZP_14338465.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD2S]
gi|419817015|ref|ZP_14341186.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD4S]
gi|404466556|gb|EKA11888.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD4S]
gi|404472763|gb|EKA17178.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD2S]
gi|404474111|gb|EKA18431.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD1S]
Length = 274
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K++ +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMVK-TDLDEFQKELNGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHIFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D V IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLTPDLLDVYFISKKLGPEPREQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q+ ++G+GN DEVL++A++HP + + +L+ E + + + + + E G +++ Y
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVENGGSTIRTY 223
Query: 234 KCYFAK 239
F +
Sbjct: 224 TNAFGE 229
>gi|197249599|ref|YP_002148658.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|238910239|ref|ZP_04654076.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|421885123|ref|ZP_16316325.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|440765816|ref|ZP_20944828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440767379|ref|ZP_20946357.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773460|ref|ZP_20952354.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|238689996|sp|B5EXE0.1|FPG_SALA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|197213302|gb|ACH50699.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|379985320|emb|CCF88598.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|436411467|gb|ELP09418.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436415805|gb|ELP13720.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436420084|gb|ELP17953.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|383808920|ref|ZP_09964449.1| DNA-formamidopyrimidine glycosylase [Rothia aeria F0474]
gi|383448314|gb|EID51282.1| DNA-formamidopyrimidine glycosylase [Rothia aeria F0474]
Length = 327
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 115/262 (43%), Gaps = 53/262 (20%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R ++ H G+ I + + D V + DF A + G I +R+G
Sbjct: 1 MPELPEVETVREGVQTHAAGRVIERVRVLDARSTRRHVPGTADFAARLEGTRIHGVYRRG 60
Query: 60 KNLWLRLDS------------PPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKY 107
K +WL L + P GM+G + VK D P K+
Sbjct: 61 KYMWLTLAATGRGGCASGELLPYALVIHLGMSGQLL-------------VKTPDFAPEKH 107
Query: 108 SKFFVELD--DG------LELSFTDKRRFAKVRLLNDPTSVPPISELG-----PDALLEP 154
K +EL+ DG EL F D+R F + L + + +P + L P+ L P
Sbjct: 108 LKIVLELEPADGESTGETTELRFVDQRIFGGMFLSDVVSDIPASASLSGAEEIPEEFLVP 167
Query: 155 MTVDE---------FTDSLSKKKI-----TIKALLLDQSYISGIGNWVADEVLYQAKIHP 200
V F SL + K+ IK LLLDQS +SGIGN ADE L++A+IH
Sbjct: 168 QAVQHIGRDPVDPYFDLSLVRAKMLRTASGIKRLLLDQSVVSGIGNIYADEALWRARIHY 227
Query: 201 LQTAVSLSKESCATLLKCIKEV 222
+ + +LS L +++V
Sbjct: 228 AKPSRTLSAAQTRELFAAVQQV 249
>gi|229019808|ref|ZP_04176610.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273]
gi|229026034|ref|ZP_04182417.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272]
gi|423389110|ref|ZP_17366336.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BAG1X1-3]
gi|423417505|ref|ZP_17394594.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BAG3X2-1]
gi|228735250|gb|EEL85862.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272]
gi|228741479|gb|EEL91677.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273]
gi|401107784|gb|EJQ15729.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BAG3X2-1]
gi|401642385|gb|EJS60096.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus BAG1X1-3]
Length = 276
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I +I V A F+ + G+ I + R+GK
Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK----DTDEWPSKYSKFFVELDD 116
L L Y+ + + R K DE K++ D
Sbjct: 61 FLLL------------------YVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + + P+++LGP+ +T + L K IK +
Sbjct: 103 GTELHYKDVRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVV 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
LLDQ + G+GN DEVL++++IHP + A SL++E + + I
Sbjct: 163 LLDQRLLVGLGNIYVDEVLFRSQIHPEREAASLTEEEIERVYEAI 207
>gi|423683389|ref|ZP_17658228.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis WX-02]
gi|383440163|gb|EID47938.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis WX-02]
Length = 275
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLAGLVRGKTIDAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD M + ++G + + DE K+ DG EL
Sbjct: 61 FLLFHLDDCV-------MVSHLRMEG-------KYGLHQNDEPLDKHVHVIFRFTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+ +LGP+ T D + L K ++K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ G+GN DE L++A IHP TA L+K+ L ++ +KE EA G +++ Y
Sbjct: 167 RTVVGLGNIYVDEALFRAGIHPEATANKLTKKQTVLLHKEIIQTLKEAVEAGGSTVRSY 225
>gi|213418642|ref|ZP_03351708.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 250
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHI-RNGRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILSEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|385334736|ref|YP_005888683.1| DNA glycosylase [Mycoplasma hyopneumoniae 168]
gi|348161144|gb|ADQ90780.2| DNA glycosylase [Mycoplasma hyopneumoniae 168]
Length = 275
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 23/245 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVITVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFAK--VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSSRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSLQFYK 234
ISG+GN ADEV + KI P + A +S++ ++ K ++E + G S+ Y
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIDFSKKILQESIKLGGSSISSYT 223
Query: 235 CYFAK 239
AK
Sbjct: 224 SLNAK 228
>gi|239828007|ref|YP_002950631.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70]
gi|239808300|gb|ACS25365.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70]
Length = 274
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + ++F ++ G+ I HR+GK
Sbjct: 1 MPELPEVEIIRRTLIPLTAGKTIADIQVFWPKIIKYPADVTEFIETMKGQTIRDIHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G R AV ++ ++ DG EL
Sbjct: 61 FLKFTLDEHVLIS-HLRMEG-------------RYAVCKKEDPIEPHTHIIFRFIDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L K TIK LLDQ
Sbjct: 107 RYRDVRKFGTMHLYRKGEEEARLPLSQLGPEPFSETFTANFLAQRLRKTNRTIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ + G+GN DE L++A IHP + + SL+ E A L + ++E E G +++ Y
Sbjct: 167 TVVVGLGNIYVDESLFRAGIHPERISSSLTDEEVARLHREMVTILQEAIEKGGSTVRSY 225
>gi|449916539|ref|ZP_21796912.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 15JP3]
gi|449941851|ref|ZP_21805715.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 11A1]
gi|449979702|ref|ZP_21816849.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 5SM3]
gi|450119878|ref|ZP_21865337.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans ST6]
gi|449151629|gb|EMB55357.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 11A1]
gi|449155137|gb|EMB58667.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 15JP3]
gi|449177628|gb|EMB79920.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 5SM3]
gi|449230876|gb|EMC30118.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans ST6]
Length = 272
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|432618903|ref|ZP_19855000.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE75]
gi|431150418|gb|ELE51468.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE75]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|26250281|ref|NP_756321.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073]
gi|227883803|ref|ZP_04001608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972]
gi|300984965|ref|ZP_07177217.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1]
gi|301018964|ref|ZP_07183187.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1]
gi|386631551|ref|YP_006151271.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. 'clone D
i2']
gi|386636471|ref|YP_006156190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. 'clone D
i14']
gi|386641242|ref|YP_006108040.1| formamidopyrimidine DNA glycosylase [Escherichia coli ABU 83972]
gi|419917505|ref|ZP_14435750.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KD2]
gi|422364319|ref|ZP_16444837.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 153-1]
gi|422977722|ref|ZP_16977466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA124]
gi|432394239|ref|ZP_19637059.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE21]
gi|432413871|ref|ZP_19656524.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE39]
gi|432433857|ref|ZP_19676280.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE187]
gi|432438456|ref|ZP_19680838.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE188]
gi|432458769|ref|ZP_19700943.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE201]
gi|432467961|ref|ZP_19710038.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE205]
gi|432497764|ref|ZP_19739555.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE214]
gi|432506519|ref|ZP_19748237.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE220]
gi|432525975|ref|ZP_19763090.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE230]
gi|432545380|ref|ZP_19782209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE236]
gi|432550864|ref|ZP_19787617.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE237]
gi|432570875|ref|ZP_19807380.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE53]
gi|432585173|ref|ZP_19821564.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE57]
gi|432594841|ref|ZP_19831152.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE60]
gi|432605066|ref|ZP_19841275.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE67]
gi|432624002|ref|ZP_19860015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE76]
gi|432653240|ref|ZP_19888984.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE87]
gi|432720782|ref|ZP_19955743.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE9]
gi|432785613|ref|ZP_20019789.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE63]
gi|432794860|ref|ZP_20028938.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE78]
gi|432796376|ref|ZP_20030413.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE79]
gi|432817412|ref|ZP_20051167.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE115]
gi|432846762|ref|ZP_20079365.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE141]
gi|432855501|ref|ZP_20083337.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE144]
gi|432975851|ref|ZP_20164683.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE209]
gi|432997410|ref|ZP_20185990.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE218]
gi|433002006|ref|ZP_20190523.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE223]
gi|433060151|ref|ZP_20247182.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE124]
gi|433074906|ref|ZP_20261543.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE129]
gi|433089354|ref|ZP_20275712.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE137]
gi|433117558|ref|ZP_20303337.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE153]
gi|433122262|ref|ZP_20307917.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE157]
gi|433127260|ref|ZP_20312801.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE160]
gi|433141334|ref|ZP_20326571.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE167]
gi|433151286|ref|ZP_20336282.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE174]
gi|433185368|ref|ZP_20369602.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE85]
gi|433209782|ref|ZP_20393445.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE97]
gi|433214629|ref|ZP_20398206.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE99]
gi|442605657|ref|ZP_21020473.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli Nissle 1917]
gi|29611716|sp|Q8FC87.3|FPG_ECOL6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|26110711|gb|AAN82895.1|AE016769_10 Formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073]
gi|227839081|gb|EEJ49547.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972]
gi|300399458|gb|EFJ82996.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1]
gi|300408245|gb|EFJ91783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1]
gi|307555734|gb|ADN48509.1| formamidopyrimidine DNA glycosylase [Escherichia coli ABU 83972]
gi|315292972|gb|EFU52324.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 153-1]
gi|355422450|gb|AER86647.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. 'clone D
i2']
gi|355427370|gb|AER91566.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. 'clone D
i14']
gi|371593094|gb|EHN81983.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA124]
gi|388393969|gb|EIL55309.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KD2]
gi|430914388|gb|ELC35484.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE21]
gi|430932897|gb|ELC53315.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE39]
gi|430950127|gb|ELC69515.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE187]
gi|430960478|gb|ELC78633.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE188]
gi|430979294|gb|ELC96079.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE201]
gi|430990903|gb|ELD07323.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE205]
gi|431020772|gb|ELD34107.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE214]
gi|431035339|gb|ELD46729.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE220]
gi|431048269|gb|ELD58252.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE230]
gi|431071229|gb|ELD79372.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE236]
gi|431076352|gb|ELD83848.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE237]
gi|431097041|gb|ELE02490.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE53]
gi|431115073|gb|ELE18600.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE57]
gi|431125742|gb|ELE28139.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE60]
gi|431144088|gb|ELE45795.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE67]
gi|431155787|gb|ELE56529.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE76]
gi|431187122|gb|ELE86636.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE87]
gi|431259411|gb|ELF51776.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE9]
gi|431325935|gb|ELG13298.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE63]
gi|431336457|gb|ELG23567.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE78]
gi|431348437|gb|ELG35294.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE79]
gi|431360552|gb|ELG47155.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE115]
gi|431392295|gb|ELG75894.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE141]
gi|431397513|gb|ELG80967.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE144]
gi|431485517|gb|ELH65176.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE209]
gi|431502102|gb|ELH80994.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE218]
gi|431504278|gb|ELH82904.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE223]
gi|431565756|gb|ELI38831.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE124]
gi|431583421|gb|ELI55426.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE129]
gi|431600642|gb|ELI70309.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE137]
gi|431630518|gb|ELI98847.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE153]
gi|431638780|gb|ELJ06658.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE157]
gi|431640136|gb|ELJ07897.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE160]
gi|431655757|gb|ELJ22787.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE167]
gi|431667077|gb|ELJ33669.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE174]
gi|431702338|gb|ELJ67138.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE85]
gi|431728062|gb|ELJ91783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE97]
gi|431731787|gb|ELJ95249.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE99]
gi|441713339|emb|CCQ06450.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli Nissle 1917]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|228475233|ref|ZP_04059959.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119]
gi|228270844|gb|EEK12246.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119]
Length = 290
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 36/257 (14%)
Query: 1 MPELPEVEAARRAIEEHCIG---------KKIVKSIIADDNKVIDGVSASDFEASVLGKA 51
MPELPEVE +R IE + KK+++ + +I G++ F + G
Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60
Query: 52 ILSAHRKGKNLWLRLDSPPFPSF---QFGMTGAIYIKG----VAVTQYKRSAVKDTDEWP 104
I+ R+ K + ++ GM G +I +A+ Y++ W
Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRK-------HW- 112
Query: 105 SKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSL 164
L++G +L F+D RRF ++R LN P E+ P+ E + F L
Sbjct: 113 ----HVIFHLNNGKKLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEE-ALQHFNHYL 167
Query: 165 SKKKIT---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
S+KK+ IK +LLD I+G GN A E L++A IHP + S + L ++E
Sbjct: 168 SQKKVANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQERQMLFYYVQE 227
Query: 222 V-REAL---GVSLQFYK 234
V +E + G S+ Y+
Sbjct: 228 VLKEGIDNGGTSISDYR 244
>gi|407978364|ref|ZP_11159196.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. HYC-10]
gi|407415132|gb|EKF36745.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. HYC-10]
Length = 277
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F + G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVKGKTIETVDIKWPNIIKRPGEPEEFARRMAGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G +Y+ V + ++ K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG----KYR---VHEANDPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LG + + T + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFHPGEEEKELPLSQLGYEPFSDAFTPAYLWEQLKKTSRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ G+GN DEVL++A IHP A LS ESC L K I
Sbjct: 167 KIVVGLGNIYVDEVLFKAGIHPETKANQLSLESCKVLHKHI 207
>gi|417142229|ref|ZP_11984804.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 97.0259]
gi|417310181|ref|ZP_12097001.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli PCN033]
gi|338768231|gb|EGP23031.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli PCN033]
gi|386155253|gb|EIH11608.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 97.0259]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L + GM+G++ I +E+P K+ + + +G
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRIL--------------PEEFPPEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|222054672|ref|YP_002537034.1| formamidopyrimidine-DNA glycosylase [Geobacter daltonii FRC-32]
gi|254789439|sp|B9M5V2.1|FPG_GEOSF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|221563961|gb|ACM19933.1| formamidopyrimidine-DNA glycosylase [Geobacter daltonii FRC-32]
Length = 271
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RRA+ GK+I+ + + + + + ++G+ I++ R+GK
Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATK--LRHPLPPELDRLLVGQLIVAMDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR F GMTG +Y+ VK + K+ + LD L
Sbjct: 59 YLLLRCKGGTI-IFHLGMTGMLYL------------VKASSPH-GKHDHLDLVLDGSYIL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF + NDP P + GP+ L + ++KI IK L++D
Sbjct: 105 RFTDPRRFGTIIWTDNDPLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSR 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++GIGN A+E L++A I P +A LS + L+ IK V
Sbjct: 165 VVAGIGNIYANESLFRAGIAPQTSASDLSPDKDLLLVDAIKGV 207
>gi|388455262|ref|ZP_10137557.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Fluoribacter dumoffii Tex-KL]
Length = 271
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I+ H G+ I + +I + K+ V A+ E V GK ILS R+ K
Sbjct: 1 MPELPEVETTKEGIKPHLEGQTI-QGVIVRNPKLRLPVPANLDELCV-GKKILSVSRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ ++L + + GM+G + I+ V + P K+ + L++GL L
Sbjct: 59 YILIQL-TKGYLLIHLGMSGHLRIEAV-------------QKKPEKHDHVMLLLENGLML 104
Query: 121 SFTDKRRFAK-VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
D RRF + + +P + LGP+ L K ++K+ ++D
Sbjct: 105 RICDPRRFGLFLYIEENPYQHQLLRHLGPEPLSNEFNGQYLAQRAQNKNKSVKSFIMDSD 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE----ALGVSLQFYKC 235
+ G+GN A E L+ A IHP A LS+ +C L IKEV A G +L+ +
Sbjct: 165 IVVGVGNIYASESLFLANIHPGTPAKKLSEATCYALTTHIKEVLTQAILAGGTTLRDFYA 224
Query: 236 YFAKP 240
+ KP
Sbjct: 225 FDGKP 229
>gi|347541319|ref|YP_004848745.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania sp. NH8B]
gi|345644498|dbj|BAK78331.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania sp. NH8B]
Length = 272
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 110/245 (44%), Gaps = 21/245 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H G I+ ++ + ++ V + A++ G +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVEPHLTGA-IITDVVVREGRLRWPVPPA-LAATLSGLPVLAVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G++ R DT P K+ + LD L
Sbjct: 59 YLLLEFASGTL-LVHLGMSGSL-----------RLVAADTP--PQKHDHIDLILDGHTAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF + P P+ + LGP+ L + D + + +IK LL+D
Sbjct: 105 RYRDPRRFGAMLWHVGPVEFHPLLAALGPEPLGDAFDADTLYHASRGRTTSIKQLLMDNH 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A+E L+QA I P + A L+ C L IK + EA G +L+ +
Sbjct: 165 VVVGVGNIYANESLFQAGIRPGRAARRLTHADCERLAAAIKSILARAIEAGGSTLRDFVG 224
Query: 236 YFAKP 240
KP
Sbjct: 225 ASGKP 229
>gi|455651570|gb|EMF30296.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces gancidicus BKS 13-15]
Length = 294
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ DF + G I R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHLAGPDDFAHRLKGHRIGVPRRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-------DTDEWPSKYSKFF 111
K LWL L D+ GM+G + ++ A K ++ +E P+ +
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLMQPHAAPDEKHLRIRVRFTEPQSPEEGPAGDT--- 117
Query: 112 VELDDGLELSFTDKRRFAKVRLL-NDPTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKK 168
EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+
Sbjct: 118 -------ELRFVDQRTFGGLSLHDNTPEGLPDVIAHIARDPL-DPLFDDEAFHQALRRKR 169
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
TIK LLDQS ISG+GN ADE L++A+IH + ++ LL +++V A
Sbjct: 170 TTIKRALLDQSLISGVGNIYADEALWRARIHYERPTAGFTRPRTLQLLGHVRDVMNA 226
>gi|450132947|ref|ZP_21870392.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML8]
gi|449152196|gb|EMB55908.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML8]
Length = 273
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSIEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|297204068|ref|ZP_06921465.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
gi|197714732|gb|EDY58766.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
Length = 287
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFE-ASVLGKAILSAHRKG 59
MPELPEVEA + + E+ +G ++V+ + I + D +V G+ +++ HR G
Sbjct: 1 MPELPEVEALKDFLTENLVGHEMVRVLPV----AISVLKTYDPPLTAVEGREVVAVHRHG 56
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS---KFFVELDD 116
K L L D P G ++ K + D P K + +E
Sbjct: 57 KFLDLETDGGPHLVTHLARAGWLHWK---------DRLPDGPPRPGKGPLALRVALETGA 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G +L+ ++ V ++ DP VP I+ LGPD L E + F L ++ +K L
Sbjct: 108 GFDLTEAGTQKRLAVYVVADPQEVPGIARLGPDPLAEDFDGERFAALLKAERRQLKGALR 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
DQ+ I+G+GN +DE+L+ A++ P + A SL+ E TL + ++
Sbjct: 168 DQTLIAGVGNAYSDEILHAARMSPFKLAASLTPEETETLYRALR 211
>gi|432865958|ref|ZP_20088808.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE146]
gi|431401887|gb|ELG85219.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE146]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L + GM+G++ I +E+P K+ + + +G
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRIL--------------PEEFPPEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|54020255|ref|YP_116103.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 232]
gi|53987428|gb|AAV27629.1| foramidopyrimidine DNA glycosylase [Mycoplasma hyopneumoniae 232]
Length = 275
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 23/245 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVITVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFAK--VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSLQFYK 234
ISG+GN ADEV + KI P + A +S++ ++ K ++E + G S+ Y
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIDFSKKILQESIKLGGSSISSYT 223
Query: 235 CYFAK 239
AK
Sbjct: 224 SLNAK 228
>gi|332559816|ref|ZP_08414138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodobacter sphaeroides WS8N]
gi|332277528|gb|EGJ22843.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodobacter sphaeroides WS8N]
Length = 283
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 13/240 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I ++ + + + + G+ +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARV--NRADLRWPFPPRMAERLTGQRVLRLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L GM+G + + G + ++ PS++ +E++ G +
Sbjct: 59 YILADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHD-----HPAPSRHDHVVLEMEGGARI 113
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ + P ++ LGP+ L L ++ IKA LLDQ
Sbjct: 114 TFNDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAAHLEGRRTPIKAALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYK 234
++G+GN EVL++A + P + A SLS+ L+ I+EV EA G SL+ Y+
Sbjct: 174 RIVAGLGNIYVCEVLFRAGLAPARLAGSLSRAEAEGLVPLIREVLSEAIEAGGSSLRDYR 233
>gi|455737689|ref|YP_007503955.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii subsp.
morganii KT]
gi|455419252|gb|AGG29582.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii subsp.
morganii KT]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G + + N+ + + E + + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTV--RYVEVRNRRLRWPVSEQIE-RLSDRPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + GM+G++ I +++T E K+ + L DG L
Sbjct: 58 YLLIELPEG-WIIIHLGMSGSLRI-----------LLEETPE--EKHDHVDMVLGDGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + P ++ LGP+ L + K+ +K+ L+D
Sbjct: 104 RYTDPRRFGAWLWADDLATCPVLANLGPEPLSDDFDAAYLFAKSRKRNTPVKSWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ ++IHPL+ A L+++ A L+ IK+V
Sbjct: 164 VVGVGNIYANESLFLSRIHPLRPAKDLTEDEVARLVATIKQV 205
>gi|300361189|ref|ZP_07057366.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri
JV-V03]
gi|300353808|gb|EFJ69679.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri
JV-V03]
Length = 276
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K I +++ ++F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVN--DPAEFIKKLTNKTILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G ++ DT + ++ +F DG L
Sbjct: 59 YLLFRFNGDLTMVSHLRMEGKYHL-----------VSPDTPKGKHEHVEFI--FTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ + F ++LS+KK IK LLDQ
Sbjct: 106 RYDDVRKFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLTYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ + G+GN DEVL+++KIHPL +A ++ + L + I
Sbjct: 166 TIVCGLGNIYVDEVLWKSKIHPLSSAQAIPADKVKNLYQNINHT 209
>gi|325283264|ref|YP_004255805.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP]
gi|324315073|gb|ADY26188.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP]
Length = 271
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 42/237 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL--GKAILSAHRK 58
MPELPEVE RR I G+ IV I +S + + L G+ +L R+
Sbjct: 1 MPELPEVETTRRKIAPLVTGRTIVD---------IRHLSPKKYPDTGLAHGRTVLEPQRR 51
Query: 59 GKNLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
GK L L L P + GMTG + +E P +++ +
Sbjct: 52 GKYLILPLAQGPDAAPDRELIVHLGMTGGFRL----------------EEGP--HTRLTL 93
Query: 113 ELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
+LD G EL F D RRF +VR++ D ++P ++ +GP+ L + + E + K
Sbjct: 94 QLDSG-ELHFNDPRRFGRVRVVQAGDYAALPTLAAMGPEPLEDSFEL-EAFAQAAAKAGA 151
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL 226
+K LL Q ++G+GN ADE L++A+IHP Q LS E A L ++EV REA+
Sbjct: 152 VKPWLLSQRPVAGVGNIYADEALWRARIHPAQR--HLSAEQAARLHAAVREVMREAV 206
>gi|82701716|ref|YP_411282.1| formamidopyrimidine-DNA glycosylase [Nitrosospira multiformis ATCC
25196]
gi|123544992|sp|Q2YBI1.1|FPG_NITMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|82409781|gb|ABB73890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Nitrosospira multiformis ATCC 25196]
Length = 272
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I G+KI + + N + E ++ G I + R+GK
Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRW---PVPELERTLCGLEIRTVTRRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + GM+G++ + +A + P K+ + LD G+ L
Sbjct: 58 YLLLDCGAGTL-ILHLGMSGSLRLLALAA-----------NIAPQKHDHIDLLLDKGMVL 105
Query: 121 SFTDKRRFAKVR-LLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF V + T P +S LGP+ L E + +IK +L++
Sbjct: 106 RFRDPRRFGAVLWTTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSR 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYKC 235
+ G+GN A+E L+ A I P A + CA L + IKE EA G SL+ +
Sbjct: 166 IVVGVGNIYANEALFLAGIDPANAAGRIGARRCAGLAQAIKETLGRAIEAGGSSLRDFVG 225
Query: 236 YFAKP-YVHKKH----RENKICR 253
P Y +++ R + CR
Sbjct: 226 SDGNPGYFQQQYWVYSRTGQPCR 248
>gi|205374552|ref|ZP_03227348.1| formamidopyrimidine-DNA glycosylase [Bacillus coahuilensis m4-4]
Length = 274
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 28/243 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++E +GKKI+ + + F +++ + I+ HR+GK
Sbjct: 1 MPELPEVETVRRTLKELIVGKKIIGVTVGWPKMIKKPEQVEQFTDALVDETIMDVHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + + + + + ++G + V + E ++ DD L
Sbjct: 61 FLIIE-------TSHYSLVSHLRMEG-------KYGVFEEKEELLPHTHVIFHFDDDTSL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L P+SELGP+ + + + L K + IKA+LLDQ
Sbjct: 107 RYRDVRKFGTMHLYTKGQEYLDKPLSELGPEPFSKEFHFNYLFEKLQKTERAIKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHP--------LQTAVSLSKESCATLLKCIKEVREALGVSL 230
+ + G+GN DEVL++A I P LQ L++E +TL + EA G ++
Sbjct: 167 TIVVGLGNIYVDEVLFKAGIDPERKSKTITLQETEQLTREIVSTLTIAV----EAGGSTI 222
Query: 231 QFY 233
+ Y
Sbjct: 223 RSY 225
>gi|450170128|ref|ZP_21883366.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM4]
gi|449246222|gb|EMC44533.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM4]
Length = 273
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVKRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQVIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK++P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVNPERLARQLKK 195
>gi|410085759|ref|ZP_11282474.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii SC01]
gi|409767704|gb|EKN51778.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii SC01]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G + + N+ + + E + + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTV--RYVEVRNRRLRWPVSEQIE-RLSDRPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + GM+G++ I +++T E K+ + L DG L
Sbjct: 58 YLLIELPEG-WIIIHLGMSGSLLI-----------LLEETPE--EKHDHVDMVLGDGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + P ++ LGP+ L + K+ +K+ L+D
Sbjct: 104 RYTDPRRFGAWLWADDLATCPVLANLGPEPLSDDFDAAYLFAKSRKRNTPVKSWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A+E L+ ++IHPL+ A L+++ A L+ IK+V
Sbjct: 164 VVGVGNIYANESLFLSRIHPLRPAKDLTEDEVARLVATIKQV 205
>gi|449883260|ref|ZP_21785037.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SA38]
gi|449250125|gb|EMC48204.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SA38]
Length = 272
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLGILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGAFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSL 207
LDQ ++G+GN DEVL+ AK+ P + A L
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQL 193
>gi|451947375|ref|YP_007467970.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfocapsa sulfexigens
DSM 10523]
gi|451906723|gb|AGF78317.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfocapsa sulfexigens
DSM 10523]
Length = 284
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + + H +G+ IV I ++ V + ++ + GK I R+ K
Sbjct: 1 MPELPEVEVICQGLLPHLLGRTIV-DIRCSGKQLRYPVLCREMQSELCGKQITGLQRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + GMTG + + DT K+ +LD+G EL
Sbjct: 60 YLILWTNEGGTIIIHLGMTGNM-------------GIFDTGSATKKHDHVCWQLDNGKEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPP----ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D RRF V LL + S GP+ ++ + ++++I IK ++
Sbjct: 107 RFNDARRFGAVHLLPGRRAKAAEKQFFSATGPEPFSRSCSISYLAELAARRRIGIKKFIM 166
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
D I+GIGN A+E L++A IHP A SLS
Sbjct: 167 DSHVIAGIGNIYANESLFRASIHPECLASSLS 198
>gi|52081409|ref|YP_080200.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|319647317|ref|ZP_08001539.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2]
gi|404490286|ref|YP_006714392.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|81690937|sp|Q65G93.3|FPG_BACLD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|52004620|gb|AAU24562.1| formamidopyrimidine-DNA glycosidase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52349287|gb|AAU41921.1| formamidopyrimidine-DNA glycosylase MutM [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317390664|gb|EFV71469.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2]
Length = 275
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLAGLVRGKTIDAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD M + ++G + + DE K+ DG EL
Sbjct: 61 FLLFHLDDCV-------MVSHLRMEG-------KYGLHQNDEPLDKHVHVIFRFTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+ +LGP+ T D + L K ++K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
+ G+GN DE L++A IHP TA L+K+ L ++ +KE EA G +++ Y
Sbjct: 167 RTVVGLGNIYVDEALFRAGIHPEATANKLTKKQTVLLHKEIIQTLKEAVEAGGSTVRSY 225
>gi|83941662|ref|ZP_00954124.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36]
gi|83847482|gb|EAP85357.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36]
Length = 283
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I ++ + + + D A + G+ + R+ K
Sbjct: 1 MPELPEVETVRRGLSPVMEGEVIARAEV--NRPDLRWPFPPDMAARLTGQRVTQLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L S GM+G + I G + Q+ V D P K+ + +G +
Sbjct: 59 YILADLSSGESLLVHLGMSGRMLISGDPLGQF----VHD-HPAPEKHDHVVFHMGNGARV 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + LL+ + S +S +GP+ L D +L K IK LLDQ
Sbjct: 114 TFNDPRRFGAMDLLDTASADSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV-REAL---GVSLQFYK 234
++G+GN E LY+A IHP + A ++ + +L+ I++V EA+ G +L+ +K
Sbjct: 174 RIVAGLGNIYVCETLYRAGIHPARKAGRIAAKRVGSLVPIIRDVLNEAITAGGSTLRDFK 233
>gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)]
gi|289768865|ref|ZP_06528243.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24]
gi|7531122|sp|Q9ZBQ6.3|FPG_STRCO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|4007732|emb|CAA22416.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)]
gi|289699064|gb|EFD66493.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24]
Length = 286
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 23/233 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + V V+ DF + I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDD- 116
K LWL L D+ GM+G + ++ E P+ K+ + V D
Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQ--------------PHETPAEKHLRIRVRFADA 106
Query: 117 -GLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIK 172
G EL F D+R F + L + P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 107 LGTELRFVDQRTFGGLSLHDTSADGLPDVIAHIARDPL-DPLFDDEAFHHALRRKRTTIK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A++H + +L++ LL +++V A
Sbjct: 166 RALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTTELLGHVRDVMNA 218
>gi|224585526|ref|YP_002639325.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|254789450|sp|C0Q1W8.1|FPG_SALPC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|224470054|gb|ACN47884.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILPEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|149203140|ref|ZP_01880111.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035]
gi|149143686|gb|EDM31722.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035]
Length = 283
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + + + + + A + G+ + + R+ K
Sbjct: 1 MPELPEVETVRRGLTPVMEGQVIASASV--NRPDLRWPFPPNMAARLTGQTVTALRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L S GM+G + + G + ++ V D P K+ ++ +G +
Sbjct: 59 YILADLTSGESLLIHLGMSGRMLVSGDPLGRF----VHD-HPAPEKHDHVVFDMANGARI 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + LL T + P ++ +GP+ L + +L + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLLPTATAETHPLLARIGPEPLGNAFSEPYLVAALKGRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
++G+GN E LY+A++ PLQ A +LS + A L+ I++V
Sbjct: 174 RIVAGLGNIYVCEALYRARLSPLQRAGALSGKRAAALVPIIRDV 217
>gi|434406788|ref|YP_007149673.1| formamidopyrimidine-DNA glycosylase Fpg [Cylindrospermum stagnale
PCC 7417]
gi|428261043|gb|AFZ26993.1| formamidopyrimidine-DNA glycosylase Fpg [Cylindrospermum stagnale
PCC 7417]
Length = 282
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + +KI + D + S +F ++ G AI + HR+GK
Sbjct: 1 MPELPEVETVRRGLNQLTLSQKITGGDVLRDRTIAYPFSVGEFVENITGSAIATWHRRGK 60
Query: 61 NLWLRLD----SPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
L L SPP + MTG + D DE K+++ +
Sbjct: 61 YLLAELSPLSSSPPTWLGVHLRMTGQLLWL-------------DQDEPLHKHTRVRLFFG 107
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITI 171
D LEL F D+R F ++ + +V I ++L D TVD D L ++ I
Sbjct: 108 DRLELRFVDQRTFGQMWWVPPDVAVESIITGLAKLAIDPFSPEFTVDYLADKLLHRRRPI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHP 200
K LLDQS ++G+GN ADE L+++ + P
Sbjct: 168 KTALLDQSVVAGLGNIYADEALFKSGVLP 196
>gi|284799871|ref|ZP_05985082.2| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703]
gi|284796762|gb|EFC52109.1| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703]
Length = 276
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKI K II + + + G+ +L+ +R+ K
Sbjct: 2 MPELPEVETTLRGIASHIDGKKIEKVIIRQFK--LRWPIHPNLAQILAGRKVLACNRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 60 YLIITFETGIL-LIHLGMSGSMRI---------FTADDERIAMPDKHDHLDFAFDDGTVL 109
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L + + L +K +K L+D +
Sbjct: 110 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNA 169
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY-- 233
+ G+GN A+E L++A I PL+ A L+K+ CA L++ +K V E G +L+ +
Sbjct: 170 VVVGVGNIYANESLFKAGISPLRPANKLTKKECALLVENVKAVLQRAIETGGSTLRDFVN 229
Query: 234 ----KCYFAKPY-VHKKHRE 248
YF + Y V+ +H E
Sbjct: 230 SDGKSGYFQQEYTVYGRHNE 249
>gi|16767011|ref|NP_462626.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167994347|ref|ZP_02575439.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168241905|ref|ZP_02666837.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260520|ref|ZP_02682493.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194451470|ref|YP_002047758.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|374978365|ref|ZP_09719708.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378447095|ref|YP_005234727.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378452608|ref|YP_005239968.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701614|ref|YP_005183572.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378986323|ref|YP_005249479.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991028|ref|YP_005254192.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379702987|ref|YP_005244715.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498361|ref|YP_005399050.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386593398|ref|YP_006089798.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417344666|ref|ZP_12124960.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417361508|ref|ZP_12135384.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417368422|ref|ZP_12139975.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|417433204|ref|ZP_12161464.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|417542561|ref|ZP_12193968.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|419728821|ref|ZP_14255784.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735134|ref|ZP_14262018.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419740602|ref|ZP_14267325.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419743584|ref|ZP_14270249.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419746735|ref|ZP_14273311.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421573808|ref|ZP_16019440.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421579207|ref|ZP_16024777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421582776|ref|ZP_16028308.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422027968|ref|ZP_16374291.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033010|ref|ZP_16379100.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427555620|ref|ZP_18929597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427573232|ref|ZP_18934201.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427594616|ref|ZP_18939109.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427619143|ref|ZP_18944024.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427642675|ref|ZP_18948881.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657997|ref|ZP_18953623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663227|ref|ZP_18958502.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427679327|ref|ZP_18963408.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|6016042|sp|O54326.3|FPG_SALTY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|238690227|sp|B4T9C0.1|FPG_SALHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|2842793|gb|AAC01773.1| MutMST [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16422294|gb|AAL22585.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194409774|gb|ACF69993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205327810|gb|EDZ14574.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205338984|gb|EDZ25748.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205350455|gb|EDZ37086.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|261248874|emb|CBG26728.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995987|gb|ACY90872.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160263|emb|CBW19786.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914752|dbj|BAJ38726.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226779|gb|EFX51829.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323132086|gb|ADX19516.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332990575|gb|AEF09558.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353583843|gb|EHC44104.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353586659|gb|EHC46167.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353613969|gb|EHC65938.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353658417|gb|EHC98608.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|357953888|gb|EHJ80274.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|380465182|gb|AFD60585.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381293734|gb|EIC34875.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381295955|gb|EIC37064.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381298514|gb|EIC39592.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381312069|gb|EIC52879.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381321018|gb|EIC61546.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383800439|gb|AFH47521.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402523178|gb|EJW30497.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402527002|gb|EJW34268.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402532672|gb|EJW39861.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414012952|gb|EKS96855.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414014057|gb|EKS97912.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414014624|gb|EKS98465.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414027848|gb|EKT11057.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414028919|gb|EKT12083.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414031489|gb|EKT14546.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414042210|gb|EKT24749.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414043063|gb|EKT25579.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414047627|gb|EKT29898.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414056025|gb|EKT37874.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + I + ++ VS + S +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRN-GRLRWPVSDEIYRLS--DTPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A+ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILPEALPAEKHDHVD-------------LVMSNGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS E C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAV 205
>gi|443328347|ref|ZP_21056946.1| formamidopyrimidine-DNA glycosylase Fpg [Xenococcus sp. PCC 7305]
gi|442792059|gb|ELS01547.1| formamidopyrimidine-DNA glycosylase Fpg [Xenococcus sp. PCC 7305]
Length = 282
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +++ + I S + V +S ++F+ S+LG AI S R+GK
Sbjct: 1 MPELPEVETVRRGLDKLTTNQFIEGSAVLLPRTVAYPLSVAEFDNSILGAAIASWQRRGK 60
Query: 61 NLWLRL-DSPPFPSFQFG----MTGAI-YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L L D P+ G MTG + ++K E K+++ +
Sbjct: 61 YLIAELIDKSKKPAGYLGVHLRMTGQLLWLK--------------QSEPLQKHTRVRLFF 106
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPP-----ISELGPDALLEPMTVDEFTDSLSKKKI 169
EL F D R F K L+ P S P + +LGP+ T LSK++
Sbjct: 107 PGNQELRFVDTRTFGKFWLV-PPASSPETIITGLQKLGPEPFATEFTSAYLAAKLSKRRR 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVRE 224
IK LLLDQ+ ++GIGN ADE L++++I P A L+ L I EV E
Sbjct: 166 NIKTLLLDQNIVAGIGNIYADETLFKSQIRPETLATDLTVAQIDKLHAAIIEVLE 220
>gi|46199756|ref|YP_005423.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB27]
gi|55981775|ref|YP_145072.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB8]
gi|7531119|sp|O50606.3|FPG_THET8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|81405496|sp|Q72HN2.3|FPG_THET2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|2897751|dbj|BAA24892.1| mutM [Thermus thermophilus HB8]
gi|46197383|gb|AAS81796.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus
HB27]
gi|55773188|dbj|BAD71629.1| MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) [Thermus
thermophilus HB8]
Length = 267
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTL 94
Query: 121 SFTDKRRFAK---VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
F D RRF + VR D +P + LGP+ L E F L + +KALLLD
Sbjct: 95 YFHDPRRFGRLFGVRR-GDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLD 153
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
Q +G+GN ADE L++A++ P + A SL++E L + ++EV
Sbjct: 154 QRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREV 198
>gi|9971915|gb|AAG10477.1|AF279106_39 predicted formamidopyrimidine-DNA glycosylase [uncultured marine
gamma proteobacterium EBAC31A08]
Length = 270
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 27/241 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RAI++ G + ++ I + N KV+D FE SV + + S R
Sbjct: 1 MPELPEVETTLRAIKKF-KGSLLKEARIHNRNLRWKVVDS-----FETSVKDQVVESLER 54
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K + +L + GM+G++ I K+ + + K+ + D+
Sbjct: 55 RAKYIIFKLSNDKKIILHLGMSGSLRI------------AKNNENFFIKHDHIELIFDEE 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ + D RRF + L +D I LGP+ L + +F S K IK+ L++
Sbjct: 103 -RIIYNDPRRFGSMHLTSDIDKHKLIKNLGPEPLSKNFNAKDFFSGCSHSKTNIKSYLMN 161
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL----KCIKEVREALGVSLQ-F 232
Q + GIGN A E L+ AKIHPL+ A L ++C L+ K +++ E G +L+ F
Sbjct: 162 QKNVVGIGNIYASESLFLAKIHPLKNANELDLDACKRLVAAGKKILEQAIEVGGTTLKDF 221
Query: 233 Y 233
Y
Sbjct: 222 Y 222
>gi|416900150|ref|ZP_11929461.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_7v]
gi|417116947|ref|ZP_11967808.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 1.2741]
gi|422801589|ref|ZP_16850085.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M863]
gi|323965901|gb|EGB61349.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M863]
gi|327250761|gb|EGE62463.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_7v]
gi|386139491|gb|EIG80646.1| DNA-formamidopyrimidine glycosylase [Escherichia coli 1.2741]
Length = 269
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYCLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILSEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|29829206|ref|NP_823840.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis
MA-4680]
gi|39931257|sp|Q82JU0.3|FPG_STRAW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|29606312|dbj|BAC70375.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
avermitilis MA-4680]
Length = 286
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + V + DF + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHTAGGEDFAHRLKGRRVGVPSRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L++ GM+G + V+ D ++ + V D
Sbjct: 61 KYLWLPLETTDTAVLAHLGMSGQLL-------------VQPHDCADERHLRIRVRFADAL 107
Query: 117 GLELSFTDKRRFAKVRLLND-PTSVPP-ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L + P +P I+ + D L +P+ D F ++L +K+ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDTTPDGLPDVIAHIARDPL-DPLFDDAAFHEALRRKRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVREA 225
LLDQS ISG+GN ADE L++A+IH + ++ A LL +++V A
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARIHYERPTAGFTRPRTAELLGHVRDVMNA 218
>gi|314936208|ref|ZP_07843555.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp.
hominis C80]
gi|418618554|ref|ZP_13181419.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis VCU122]
gi|313654827|gb|EFS18572.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp.
hominis C80]
gi|374827314|gb|EHR91177.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis VCU122]
Length = 290
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 36/257 (14%)
Query: 1 MPELPEVEAARRAIEEHCIG---------KKIVKSIIADDNKVIDGVSASDFEASVLGKA 51
MPELPEVE +R IE + KK+++ + +I G++ F + G
Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60
Query: 52 ILSAHRKGKNLWLRLDSPPFPSF---QFGMTGAIYIKG----VAVTQYKRSAVKDTDEWP 104
I+ R+ K + ++ GM G +I +A+ Y++ W
Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRK-------HW- 112
Query: 105 SKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSL 164
L++G +L F+D RRF ++R LN P E+ P+ E + F L
Sbjct: 113 ----HVIFHLNNGKKLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEE-ALQHFNHYL 167
Query: 165 SKKKIT---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
S+KK+ IK +LLD I+G GN A E L++A IHP + S + L ++E
Sbjct: 168 SQKKVANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQERQLLFYYVQE 227
Query: 222 V-REAL---GVSLQFYK 234
V +E + G S+ Y+
Sbjct: 228 VLKEGIDNGGTSISDYR 244
>gi|126460786|ref|YP_001041900.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC
17029]
gi|166198739|sp|A3PFL2.1|FPG_RHOS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|126102450|gb|ABN75128.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rhodobacter sphaeroides ATCC 17029]
Length = 283
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 13/240 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I ++ + + + + G+ +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARV--NRADLRWPFPPRMAERLTGQRVLRLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L GM+G + + G + ++ PS++ +E++ G +
Sbjct: 59 YILADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHG-----HPAPSRHDHVVLEMEGGARI 113
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ + P ++ LGP+ L L ++ IKA LLDQ
Sbjct: 114 TFNDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFYK 234
++G+GN EVL++A + P + A SLS+ L+ I+EV EA G SL+ Y+
Sbjct: 174 RIVAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEAEGLVPLIREVLLEAIEAGGSSLRDYR 233
>gi|78355589|ref|YP_387038.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio alaskensis G20]
gi|78217994|gb|ABB37343.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio alaskensis G20]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 53/267 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G++I + + + V F+A G+ I R+GK
Sbjct: 1 MPELPEVETIARGLAPELTGRRITEVEVFNAGSVQGDREV--FDACTPGRVIAGVGRRGK 58
Query: 61 NLWLRL--------------------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT 100
L + L D+P +F M+G ++I G
Sbjct: 59 LLLVHLEKERRQGAACRAVLDHRPAGDTPDMLAFHLRMSGRLFIYG-------------P 105
Query: 101 DEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPI---SELGPDALLEPMTV 157
++ P +++ + LD G L F D R+F R L+ P S P + LGP EP+ V
Sbjct: 106 EQLPGPHTRIIITLDSGRRLFFDDARKFGSCRALS-PFSRPLWRFWATLGP----EPLDV 160
Query: 158 DE--FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK-ESCAT 214
D F + ++++ +KALLLDQ+ I+G+GN ADE L++A I P ++ E+
Sbjct: 161 DRETFIEQFAERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDEAERR 220
Query: 215 LLKCIKEVREAL-------GVSLQFYK 234
L + E+RE L G S++ Y+
Sbjct: 221 LGRLYDELREVLREAISECGSSIRDYR 247
>gi|417939920|ref|ZP_12583208.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK313]
gi|343388801|gb|EGV01386.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK313]
Length = 274
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA +K+I +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEIAY-SKMIK-TDLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ E + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPSEEDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQFY 233
Q+ ++G+GN DEVL++A+IHP + + +L+ E + + + + E G +++ Y
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQIHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 234 KCYFAK 239
F +
Sbjct: 224 TNAFGE 229
>gi|322391813|ref|ZP_08065278.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC
700780]
gi|321145293|gb|EFX40689.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC
700780]
Length = 274
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 34/251 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I + +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SNIDIRYPKMIK-IDLYEFKRELPGQVIQSMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F++ DG
Sbjct: 59 YLIFYLSDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHLFIQFTDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + + F +L K K IK
Sbjct: 104 LVYEDVRKFGTMELL-----APELLETYFLSKKLGPEPTEQDFDLPTFQKALQKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGV 228
+ LLDQ+ ++G+GN DEVL++AKIHP + + SL+ + + +K + + E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAKIHPSRLSNSLTAQEARKVHDETIKVLGQAVEKGGS 218
Query: 229 SLQFYKCYFAK 239
+++ Y F +
Sbjct: 219 TIRTYTNAFGE 229
>gi|331675115|ref|ZP_08375872.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280]
gi|432871238|ref|ZP_20091558.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE147]
gi|331068024|gb|EGI39422.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280]
gi|431408238|gb|ELG91429.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE147]
Length = 269
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L + GM+G++ I +E+P K+ + + +G
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRIL--------------PEEFPPEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLTQVIKAV 205
>gi|450086703|ref|ZP_21853836.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NV1996]
gi|449219144|gb|EMC19122.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NV1996]
Length = 273
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 28/243 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVKRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL----LKCIKEVREALGVSLQ 231
LDQ ++G+GN DEVL+ AK+ P + A L K + ++ ++ E G +++
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKKSEIKRIHDETIRILQLAIEKGGSTIR 221
Query: 232 FYK 234
YK
Sbjct: 222 SYK 224
>gi|450062937|ref|ZP_21844658.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML5]
gi|449205204|gb|EMC05961.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans NLML5]
Length = 273
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVKRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLLF--------------EDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R+F LL P S ++GP+ + + F + L+K IK LL
Sbjct: 104 LVYQDVRKFGTFELL--PKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLL 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSK 209
LDQ ++G+GN DEVL+ AK+ P + A L K
Sbjct: 162 LDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKK 195
>gi|301047424|ref|ZP_07194504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1]
gi|300300698|gb|EFJ57083.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1]
Length = 269
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVEPSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP + A SLS C L + IK V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAV 205
>gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 269
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR I + + I+ + + + +++ VSA S+ + +LS R+ K
Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRN-SRLRWPVSAEIL--SLSDEPVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + + GM+G++ + + +Y P K+ + +D G L
Sbjct: 58 YLLIEL-TRGWIIVHLGMSGSLRV----LPEYSE---------PEKHDHVDLVMDSGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF ++P + ++ LGP+ L + D + KK IK ++D
Sbjct: 104 RYTDPRRFGAWLWTDNPETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ G+GN A E L+ A IHP +TA SL++ A L+ IK+V
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRTAGSLNENDAAILVSVIKQV 205
>gi|422016709|ref|ZP_16363289.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia burhodogranariea DSM 19968]
gi|414092475|gb|EKT54152.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia burhodogranariea DSM 19968]
Length = 271
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 30/260 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +++ + S+ S+ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNSIQYAVVRNSRLRW---PVSEQIKSLSDEIILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + + GM+G++ I T+E P K+ + L DG
Sbjct: 58 YLLIELKTG-WIIIHLGMSGSLRIL--------------TEELPEEKHDHVDLILRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF +D + +S LGP+ L + + SK+KI IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCDDLNTSSVLSHLGPEPLSDEFNAQYLFEQASKRKIAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVR----EALGVSLQFY-- 233
+ G+GN A+E L+ I P + +L+ + L++ IK+V E G +L+ +
Sbjct: 163 VVVGVGNIYANEALFATGISPEKITNTLTLNQSSALVEQIKKVLQRSIEQGGTTLKDFLQ 222
Query: 234 ----KCYFAKP-YVHKKHRE 248
YFA+ YV+ K E
Sbjct: 223 SDGKPGYFAQQLYVYGKKGE 242
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,329,259,829
Number of Sequences: 23463169
Number of extensions: 169738317
Number of successful extensions: 403104
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3669
Number of HSP's successfully gapped in prelim test: 717
Number of HSP's that attempted gapping in prelim test: 393466
Number of HSP's gapped (non-prelim): 4746
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)