Query 022932
Match_columns 290
No_of_seqs 152 out of 939
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 07:11:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022932.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022932hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02175 endoglucanase 100.0 4.6E-81 1E-85 610.4 29.0 266 24-289 19-284 (484)
2 PLN02340 endoglucanase 100.0 7.4E-81 1.6E-85 623.9 29.2 279 8-289 7-294 (614)
3 PLN00119 endoglucanase 100.0 1.1E-80 2.3E-85 609.1 28.2 278 9-289 11-291 (489)
4 PLN02909 Endoglucanase 100.0 1E-80 2.2E-85 608.9 27.3 264 20-289 25-290 (486)
5 PLN02266 endoglucanase 100.0 3.5E-80 7.5E-85 608.0 29.6 266 24-290 41-310 (510)
6 PLN02420 endoglucanase 100.0 8E-80 1.7E-84 607.2 29.6 284 4-289 6-306 (525)
7 PLN02613 endoglucanase 100.0 1E-79 2.2E-84 603.9 28.5 275 9-289 4-283 (498)
8 PLN02308 endoglucanase 100.0 3.6E-79 7.8E-84 599.7 29.1 280 9-289 6-291 (492)
9 PLN02171 endoglucanase 100.0 4.8E-79 1.1E-83 612.2 28.4 269 19-289 20-295 (629)
10 PLN03009 cellulase 100.0 7.2E-78 1.6E-82 592.3 29.1 265 24-289 23-294 (495)
11 PLN02345 endoglucanase 100.0 1.4E-77 3.1E-82 585.5 25.7 253 33-289 1-260 (469)
12 PF00759 Glyco_hydro_9: Glycos 100.0 3.2E-70 7E-75 533.1 19.8 259 29-289 1-274 (444)
13 cd00249 AGE AGE domain; N-acyl 97.5 0.0056 1.2E-07 58.3 17.1 147 82-263 47-200 (384)
14 KOG2787 Lanthionine synthetase 96.5 0.042 9.1E-07 52.0 12.0 112 113-264 241-354 (403)
15 cd00249 AGE AGE domain; N-acyl 96.5 0.05 1.1E-06 51.8 12.6 119 119-263 16-142 (384)
16 PF07944 DUF1680: Putative gly 96.1 0.059 1.3E-06 54.4 11.3 150 74-264 53-203 (520)
17 COG1331 Highly conserved prote 95.7 0.04 8.6E-07 56.8 8.2 85 173-264 410-496 (667)
18 PF03663 Glyco_hydro_76: Glyco 95.2 0.46 1E-05 45.9 13.3 146 90-263 90-248 (370)
19 PF07221 GlcNAc_2-epim: N-acyl 92.9 0.39 8.4E-06 45.4 7.7 141 85-263 18-166 (346)
20 cd02892 SQCY_1 Squalene cyclas 92.7 9.8 0.00021 39.4 18.2 160 28-217 325-490 (634)
21 COG2942 N-acyl-D-glucosamine 2 86.4 9.8 0.00021 37.2 11.3 125 112-263 73-201 (388)
22 TIGR03463 osq_cycl 2,3-oxidosq 84.5 55 0.0012 34.1 18.8 90 117-216 400-490 (634)
23 COG3533 Uncharacterized protei 83.9 14 0.0003 37.5 11.1 147 73-264 54-206 (589)
24 PF03663 Glyco_hydro_76: Glyco 75.3 3.2 6.9E-05 40.1 3.7 84 174-263 88-182 (370)
25 PF07470 Glyco_hydro_88: Glyco 70.4 49 0.0011 31.0 10.5 114 74-215 165-287 (336)
26 PLN03012 Camelliol C synthase 68.7 1.7E+02 0.0037 31.4 16.0 162 28-216 435-603 (759)
27 PF07172 GRP: Glycine rich pro 65.1 5.5 0.00012 31.3 2.4 27 1-28 1-28 (95)
28 PF06917 Pectate_lyase_2: Peri 63.3 12 0.00026 37.8 4.8 48 240-287 441-502 (557)
29 cd04794 euk_LANCL eukaryotic L 63.2 1.1E+02 0.0023 28.9 11.3 114 111-263 182-297 (343)
30 PF07221 GlcNAc_2-epim: N-acyl 58.7 23 0.00051 33.3 5.9 82 173-263 20-107 (346)
31 cd04791 LanC_SerThrkinase Lant 56.0 81 0.0017 28.9 9.0 24 240-263 143-166 (321)
32 TIGR02474 pec_lyase pectate ly 54.4 1.9E+02 0.0042 27.2 13.9 153 23-215 58-218 (290)
33 COG4225 Predicted unsaturated 53.8 1.1E+02 0.0024 29.7 9.3 115 73-215 175-303 (357)
34 cd04791 LanC_SerThrkinase Lant 53.7 90 0.002 28.6 8.9 112 112-263 157-268 (321)
35 PF13249 Prenyltrans_2: Prenyl 52.9 23 0.00051 27.0 4.1 22 116-139 42-63 (113)
36 KOG4056 Translocase of outer m 52.7 22 0.00047 29.9 4.0 38 173-210 11-52 (143)
37 cd02889 SQCY Squalene cyclase 45.7 2.5E+02 0.0054 26.0 14.7 158 28-215 42-203 (348)
38 cd02889 SQCY Squalene cyclase 44.2 2.1E+02 0.0045 26.6 9.8 24 114-138 188-211 (348)
39 PLN02993 lupeol synthase 42.0 4.7E+02 0.01 28.1 17.3 164 29-216 436-603 (763)
40 TIGR01507 hopene_cyclase squal 40.1 4.6E+02 0.0099 27.4 16.6 23 114-137 400-422 (635)
41 PF09492 Pec_lyase: Pectic aci 38.2 2E+02 0.0043 27.1 8.5 157 21-215 51-213 (289)
42 PF07944 DUF1680: Putative gly 32.0 1.6E+02 0.0036 29.7 7.4 65 199-263 253-329 (520)
43 KOG1586 Protein required for f 31.9 59 0.0013 30.1 3.7 34 179-212 73-106 (288)
44 PF11131 PhrC_PhrF: Rap-phr ex 31.8 55 0.0012 21.1 2.5 24 4-27 2-25 (37)
45 PF07116 DUF1372: Protein of u 29.7 22 0.00048 28.3 0.5 35 70-116 64-102 (104)
46 KOG2244 Highly conserved prote 29.3 2E+02 0.0043 29.9 7.2 85 175-264 506-605 (786)
47 cd02892 SQCY_1 Squalene cyclas 29.2 4.5E+02 0.0097 27.3 10.2 24 114-138 473-496 (634)
48 PF09492 Pec_lyase: Pectic aci 27.3 5.3E+02 0.012 24.3 9.5 86 111-215 56-144 (289)
49 PF03230 Antirestrict: Antires 27.2 54 0.0012 25.7 2.3 42 172-217 44-85 (94)
50 PF06202 GDE_C: Amylo-alpha-1, 26.6 3.4E+02 0.0075 26.1 8.3 41 174-214 167-207 (370)
51 PF13243 Prenyltrans_1: Prenyl 26.4 15 0.00033 28.1 -0.9 22 114-136 43-64 (109)
52 TIGR02474 pec_lyase pectate ly 23.7 6.3E+02 0.014 23.9 11.4 85 112-215 62-149 (290)
53 TIGR00985 3a0801s04tom mitocho 23.6 1.2E+02 0.0026 25.8 3.9 33 174-206 10-46 (148)
54 PRK13838 conjugal transfer pil 23.3 67 0.0015 27.8 2.5 20 3-22 1-20 (176)
55 KOG2430 Glycosyl hydrolase, fa 22.9 99 0.0022 30.1 3.6 60 199-263 324-386 (587)
56 PRK15137 DNA-specific endonucl 22.5 1.4E+02 0.0031 27.2 4.5 42 3-44 1-42 (235)
57 PF10789 Phage_RpbA: Phage RNA 22.1 2.1E+02 0.0045 23.1 4.8 60 189-251 46-106 (108)
58 TIGR01787 squalene_cyclas squa 21.1 1.6E+02 0.0035 30.6 5.1 19 117-136 509-527 (621)
59 KOG2429 Glycosyl hydrolase, fa 20.1 82 0.0018 32.4 2.6 25 238-262 373-397 (622)
60 PRK10081 entericidin B membran 20.1 1.1E+02 0.0023 21.1 2.4 21 3-23 2-23 (48)
No 1
>PLN02175 endoglucanase
Probab=100.00 E-value=4.6e-81 Score=610.36 Aligned_cols=266 Identities=80% Similarity=1.321 Sum_probs=250.5
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLE 103 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e 103 (290)
-..+.+|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus 19 ~~~~~~Y~~aL~kSl~Fy~aQrsG~Lp~~~r~~WRgds~l~Dg~~~~~DlsGGwyDAGD~vKf~~p~A~t~t~LaW~~~e 98 (484)
T PLN02175 19 TDANPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSALE 98 (484)
T ss_pred ccccccHHHHHHHHHHHHHHhhCcCCCCcCCCCCccccccccCccCccCCCCCeeeCCCCCeeCchHHHHHHHHHhhhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932 104 YGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (290)
Q Consensus 104 ~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal 183 (290)
|++.+.++++++|+||||++|||||||+..+|.||+|||+++.||.+|++||+++.+|++|+|+.++|||++++++||||
T Consensus 99 ~~~~~~~~~~~~l~~lkw~~Dyllk~~~~~~g~vy~qVG~~~~Dh~~W~~PE~~~~~R~~~~is~~~PGSd~aae~AAAL 178 (484)
T PLN02175 99 YGKRMGPELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAAL 178 (484)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhCcCCCCCeEEEEeCCCCCCcccCCChhHccCccceEecCCCCCccHHHHHHHHHH
Confidence 99999888999999999999999999954389999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|+||||||++||+||++||++||++|+||+++|+.|.++++...+++|++.+++.||++|||+|||+||||++|+++++.
T Consensus 179 AaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~~Y~s~s~y~DEl~WAAawLY~ATgd~~Yl~~~~~ 258 (484)
T PLN02175 179 AAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLRATNDPYYANFIKS 258 (484)
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCcccCccccccCccccCCCccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999987655445789998788999999999999999999999999998
Q ss_pred cCCCCCCCcccccchhHHHHHHhhcc
Q 022932 264 VGDDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 264 ~~~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
++.......|+||+|.++++|||+++
T Consensus 259 ~~~~~~~~~~~Wd~k~~g~~vLla~~ 284 (484)
T PLN02175 259 LGGGDQPDIFSWDNKYAGAYVLLSRR 284 (484)
T ss_pred cCCCCCCCccCCcCHHHHHHHHHHHh
Confidence 76544556899999999999999985
No 2
>PLN02340 endoglucanase
Probab=100.00 E-value=7.4e-81 Score=623.90 Aligned_cols=279 Identities=50% Similarity=0.894 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHh--hccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcc
Q 022932 8 SLRCCCLFLFLLLIE--NAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVK 85 (290)
Q Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~K 85 (290)
.|-++++++++|... .+...++|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~nY~~aL~~Sl~Fy~aQRsG~Lp~~~~~~WR~ds~l~Dg~~~~~DlsGGwyDAGD~vK 86 (614)
T PLN02340 7 SLGGAALLLLVLAAAASAAAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAGDHVK 86 (614)
T ss_pred chhHHHHHHHHHHhhhccccCCCcHHHHHHHHHHHHHHhcCcCCCccCCCcccccccCCCcccccCCCCCCceeCCCcce
Confidence 344444444444333 356778999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccce
Q 022932 86 FNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV 163 (290)
Q Consensus 86 y~~~~a~s~~~L~w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~ 163 (290)
|++|+|+|+++|+|+++||++.+ .|++|+||||||||+|||+|||++ ++.||+||||++.||.+|++||+++.+|++
T Consensus 87 f~~p~a~t~t~L~w~~~ef~~~~~~~~~~~~~ldeirw~~Dyllk~~~~-~~~~~~qVGdg~~DH~~W~~PE~~~~~R~~ 165 (614)
T PLN02340 87 FGLPMAFAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQ-PNVLWGQVGDGDSDHYCWERAEDMTTPRTA 165 (614)
T ss_pred ecchhHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHhcCC-CCeEEEEeCCCCcccccCCChhhcCCcCce
Confidence 99999999999999999999999 899999999999999999999998 999999999999999999999999999999
Q ss_pred EEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHH
Q 022932 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW 243 (290)
Q Consensus 164 ~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~w 243 (290)
|+|+.++|||++++++|||||+|||||+++||+||++||+|||++|+||+++|+.|.++++. ..++|+| +++.||++|
T Consensus 166 y~i~~~~pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~-a~~~Y~s-s~~~DEl~W 243 (614)
T PLN02340 166 YKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQN-AKKFYTS-SGYSDELLW 243 (614)
T ss_pred eecCCCCCccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCc-cccCCCC-CCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999776654 5789999 999999999
Q ss_pred HHHHHHHHcCChhHHHHHHHcCC-----CCCCCcccccchhHHHHHHhhcc
Q 022932 244 GAAWLFRATNDVTYYNFIKSVGD-----DGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 244 AA~eLy~aTgd~~Yl~~a~~~~~-----~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
||+|||+||||++|++++.++.. ......|+||+|.+++++||+++
T Consensus 244 AAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~ 294 (614)
T PLN02340 244 AAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKI 294 (614)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHH
Confidence 99999999999999999987532 12234699999999999999975
No 3
>PLN00119 endoglucanase
Probab=100.00 E-value=1.1e-80 Score=609.08 Aligned_cols=278 Identities=55% Similarity=0.979 Sum_probs=263.2
Q ss_pred HHHHHHHHHHHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCccccc
Q 022932 9 LRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNF 88 (290)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~ 88 (290)
-.++||++|+.+..+.+..++|.++|++||+||++||||.+|++++++||++|++.||.+.++||+|||||||||+||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~nY~~aL~~sl~Ff~aQRsG~lp~~~r~~WRgds~~~dg~~~~~DlsGGwyDAGD~~Kf~~ 90 (489)
T PLN00119 11 TLSICIVLLVMSMARGAVSTNYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGF 90 (489)
T ss_pred HHHHHHHHHHHHHhcccccccHHHHHHHHHHHhHhcCCCCCCccCCCCCcCcccccCCCCCcccCCCCceeCCCCceeCc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEc
Q 022932 89 PMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSV 166 (290)
Q Consensus 89 ~~a~s~~~L~w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~ 166 (290)
|+|+|+++|+|+++||++.| .+++++||||||||+|||||||++ +|.||+|||+++.||.+|++||+++.+|++|.|
T Consensus 91 p~a~s~t~L~w~~~ef~~~~~~~~~~~~~lde~kw~~Dyllk~~~~-~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~i 169 (489)
T PLN00119 91 PLAFTTTMLAWSNIEMGSQLKAHHELGNALAALKWATDYLIKAHPQ-PNVLYGQVGDGNSDHACWMRPEDMTTPRTSYRI 169 (489)
T ss_pred chHHHHHHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHhcCC-CCeEEEEeccCCCcccccCChhhCCCcCceeec
Confidence 99999999999999999999 789999999999999999999998 999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHH
Q 022932 167 SASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAA 246 (290)
Q Consensus 167 ~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~ 246 (290)
+.++|||++++++|||||++||||+++||+||++||++||++|+||+++|+.|.++++. .+++|+| +++.||++|||+
T Consensus 170 ~~~~pgSd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~-~~g~Y~s-s~~~DEl~WAAa 247 (489)
T PLN00119 170 DAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPN-AGGFYAS-SGYEDELLWAAA 247 (489)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC-CCCCCCC-CchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876553 5789999 999999999999
Q ss_pred HHHHHcCChhHHHHHHHcCC-CCCCCcccccchhHHHHHHhhcc
Q 022932 247 WLFRATNDVTYYNFIKSVGD-DGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 247 eLy~aTgd~~Yl~~a~~~~~-~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
|||++|||++|+++++.... ....+.|+||+|.+++++||+++
T Consensus 248 wLY~aTgd~~Yl~~~~~~~~~~~~~~~f~Wd~k~~g~~vlLa~l 291 (489)
T PLN00119 248 WLHRATNDQTYLDYLTQASNTGGPRTVFAWDDKFVGAQVLVAKL 291 (489)
T ss_pred HHHHHhCCHHHHHHHHhccccCCCCcccChhhhHHHHHHHHHHH
Confidence 99999999999999987532 23356899999999999999985
No 4
>PLN02909 Endoglucanase
Probab=100.00 E-value=1e-80 Score=608.86 Aligned_cols=264 Identities=53% Similarity=0.997 Sum_probs=248.7
Q ss_pred HHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHH
Q 022932 20 LIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSW 99 (290)
Q Consensus 20 ~~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w 99 (290)
.......+++|.++|++||+||++||||.+|++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|
T Consensus 25 ~~~~~~~~~nY~~aL~~sl~Fy~aQRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~~~L~w 104 (486)
T PLN02909 25 LVVAVGTHFNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAW 104 (486)
T ss_pred hhhccCCCCcHHHHHHHHHHHHHHhcCcCCCCCCCCCCCcccccccCCccccCCCCCceeCCCCceeCCchHHHHHHHHH
Confidence 44446777899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHH
Q 022932 100 STLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAG 177 (290)
Q Consensus 100 ~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~ 177 (290)
++++|++.| .+++||||||||||+|||||||+. +|.||+|||+++.||.+|++||+++.+|++|.|+.++|||++++
T Consensus 105 ~~~~y~~~~~~~g~~~d~ldeikw~~D~llk~~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~i~~~~pgtd~a~ 183 (486)
T PLN02909 105 STLAYEKELRATGELENVRAAIRWGTDYFLKAASR-KNRLYVQVGDPNLDHQCWVRPENMKTPRTVLEIDEKTPGTEIAA 183 (486)
T ss_pred HHHHhHHHHhhcCChHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCCCcccCCChhhccCCceeEecCCCCCCcHHHH
Confidence 999999999 789999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhH
Q 022932 178 ETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTY 257 (290)
Q Consensus 178 ~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Y 257 (290)
++|||||++||||+++||+||++||++||++|+||++||+.|.. ..++|++.++|.||++|||+|||++|||++|
T Consensus 184 ~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~-----~~~~y~s~s~y~DEl~WAAawLy~aTgd~~Y 258 (486)
T PLN02909 184 ETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDG-----ECPFYCSYSGYNDELLWAATWLYKATKKQMY 258 (486)
T ss_pred HHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCcCC-----CCCccccCCCcchHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999998853 2478988788999999999999999999999
Q ss_pred HHHHHHcCCCCCCCcccccchhHHHHHHhhcc
Q 022932 258 YNFIKSVGDDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 258 l~~a~~~~~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+++++........+.|+||+|..++++||+++
T Consensus 259 l~~~~~~~~~~~~~~~sWD~k~~g~~~lLa~~ 290 (486)
T PLN02909 259 LKYIKHEAISASVAEFSWDLKYAGAQVLLSKL 290 (486)
T ss_pred HHHHHhcccccCCCccCCcccccHHHHHHHHh
Confidence 99998754433456799999999999999975
No 5
>PLN02266 endoglucanase
Probab=100.00 E-value=3.5e-80 Score=608.04 Aligned_cols=266 Identities=66% Similarity=1.139 Sum_probs=249.4
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLE 103 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e 103 (290)
-.++++|.++|++||+||++||||.+|++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus 41 ~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~e 120 (510)
T PLN02266 41 RLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIE 120 (510)
T ss_pred CCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCcceeCCCCceecchHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932 104 YGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (290)
Q Consensus 104 ~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal 183 (290)
|++.+.+++||||||||||+|||||||+. +|.||+|||+++.||.+|++||+++.+|++|+|+.++|||++++++||||
T Consensus 121 f~~~~~~~~pd~Ldelkw~~D~llk~~~~-~~~vy~qVg~~~~Dh~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAAL 199 (510)
T PLN02266 121 FGGLMKSELQNAKDAIRWATDYLLKATAH-PDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAAL 199 (510)
T ss_pred hhhccccccHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCCCcccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHHH
Confidence 99999999999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|+||||||++||+||++||++||++|+|++++|+.|.+++....+++|.+.+++.||++|||+|||++|||++|+++++.
T Consensus 200 Aaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~ 279 (510)
T PLN02266 200 AAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQV 279 (510)
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999876543335789988788999999999999999999999999987
Q ss_pred c----CCCCCCCcccccchhHHHHHHhhccC
Q 022932 264 V----GDDGGTDVFSWDNKFAGAHVLLARLY 290 (290)
Q Consensus 264 ~----~~~~~~~~~~Wd~~~~~~~~lla~~~ 290 (290)
. +.....+.|+||+|.+++++||++++
T Consensus 280 ~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~ 310 (510)
T PLN02266 280 NGQILGADEFDNTFGWDNKHVGARILLSKAF 310 (510)
T ss_pred HHhhccccccCCccCcchhHHHHHHHHHHHH
Confidence 4 22234568999999999999999863
No 6
>PLN02420 endoglucanase
Probab=100.00 E-value=8e-80 Score=607.21 Aligned_cols=284 Identities=51% Similarity=0.930 Sum_probs=257.9
Q ss_pred chhhHHHHHHHHHHHHHHhh----------ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 022932 4 RRGVSLRCCCLFLFLLLIEN----------AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDL 73 (290)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl 73 (290)
.||+-+.||.+++++++... ..++++|.++|++||+||++||||.+|.+++++||++||+.||.+.++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~~Dl 85 (525)
T PLN02420 6 HRHKPCHFLLLLLLLITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDL 85 (525)
T ss_pred cccchHHHHHHHHHHHHHHhhccccccccccCCcccHHHHHHHHHHHHHHhcCCCCCcCCCCcccccCcCcCCCcCcccC
Confidence 36666666665555443222 34679999999999999999999999999999999999999999999999
Q ss_pred ccceecCCCCcccccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCC
Q 022932 74 TGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCW 151 (290)
Q Consensus 74 ~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w 151 (290)
+|||||||||+||++|+|+|+++|+|++++|++.+ .+++|+||||||||+|||||||+. ++.+|+|||+++.||.+|
T Consensus 86 sGGwyDAGD~~Kf~~p~a~t~~~L~w~~~ef~d~~~~~g~~~d~Ldeikw~lD~llk~~~~-~~~~~~qvGdg~~DH~~w 164 (525)
T PLN02420 86 VGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDQLASTGELSHALEAIKWGTDYFIKAHTS-PNVLWAEVGDGDTDHYCW 164 (525)
T ss_pred CCcceecCccceecchHHHHHHHHHHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHHHhCcC-CCceEEeeCCCCcccccc
Confidence 99999999999999999999999999999999999 789999999999999999999998 999999999999999999
Q ss_pred CCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCccc
Q 022932 152 ERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFY 231 (290)
Q Consensus 152 ~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y 231 (290)
++||+++.+|++|.|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++.+ ..+++|
T Consensus 165 ~~Pe~~~~~R~~~~i~~~~pgsd~aa~~AAALA~AS~vfk~~D~~YA~~~L~~Ak~ly~fA~~~~g~y~~~~~-~~~g~Y 243 (525)
T PLN02420 165 QRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLK-VVKSYY 243 (525)
T ss_pred cChhhccccCceEEecCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhcCCccCCCCc-ccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976544 368899
Q ss_pred CCCCCcchHHHHHHHHHHHHcCChhHHHHHHHcCC-----CCCCCcccccchhHHHHHHhhcc
Q 022932 232 CSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD-----DGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 232 ~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~~~-----~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+|+++|.||++|||+|||++|||++|++++.++.. ......|+||+|..++++||+++
T Consensus 244 ~s~s~y~DEl~WAAawLY~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~WD~k~~G~~~Lla~~ 306 (525)
T PLN02420 244 ASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASML 306 (525)
T ss_pred CCcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCccccCcccCCcccHHHHHHHHHHH
Confidence 98788999999999999999999999999977422 12234689999999999999875
No 7
>PLN02613 endoglucanase
Probab=100.00 E-value=1e-79 Score=603.86 Aligned_cols=275 Identities=56% Similarity=0.999 Sum_probs=255.3
Q ss_pred HHHHHHHHHHHH--HhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCccc
Q 022932 9 LRCCCLFLFLLL--IENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKF 86 (290)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky 86 (290)
|.+||+++||+. .-++.++++|.++|++||+||++||||.+|++++++||++||+.||.+.++||+|||||||||+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~Fy~~QRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Ky 83 (498)
T PLN02613 4 LLVLMLVGMFLAFESLVALESPDYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGKPENVNLTGGYYDAGDNVKF 83 (498)
T ss_pred ehHHHHHHHHHHhhceeecccchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccccCCCcccCcccCCCCceeCCCCcee
Confidence 446777777553 344888899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceE
Q 022932 87 NFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVY 164 (290)
Q Consensus 87 ~~~~a~s~~~L~w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~ 164 (290)
++|+|+|+++|+|+++||++.| +|++||||||||||+|||+|||++ +|.||+|||++..||.+|++||+++.+|++|
T Consensus 84 ~~p~a~s~t~L~w~~~e~~~~~~s~~~~~d~ldeikw~lD~llkm~~~-~~~~~~QVGdg~~dH~~W~~Pe~~~~~R~~~ 162 (498)
T PLN02613 84 GWPMAFTVTLLSWAAIEYQNEISSVNQLGYLRSAIRWGTDFILRAHTS-PTTLYTQVGDGNADHQCWERPEDMDTPRTLY 162 (498)
T ss_pred cCchHHHHHHHHHHHHHhHHHHhhcCCchHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCccccccCCccccCCCCeeE
Confidence 9999999999999999999999 899999999999999999999999 9999999999999999999999999999999
Q ss_pred EcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHH
Q 022932 165 SVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWG 244 (290)
Q Consensus 165 ~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wA 244 (290)
.++.++|||++++++|||||+||||||++||+||++||++||++|+|++++|+.|.+ ..++|.+.+++.||++||
T Consensus 163 ~~t~~~pgTd~a~~~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~~a~~~~g~y~~-----~~~~y~s~s~~~DEl~WA 237 (498)
T PLN02613 163 KITSSSPGSEAAGEAAAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQA-----SCPFYCSYSGYQDELLWA 237 (498)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCCcCC-----CCCcccccCccchHHHHH
Confidence 999999999999999999999999999999999999999999999999999999864 246888767899999999
Q ss_pred HHHHHHHcCChhHHHHHHHcCCC-CCCCcccccchhHHHHHHhhcc
Q 022932 245 AAWLFRATNDVTYYNFIKSVGDD-GGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 245 A~eLy~aTgd~~Yl~~a~~~~~~-~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
|+|||++|||++|+++++.+... .....|+||+|..++++||+++
T Consensus 238 AawLy~aTGd~~Yl~~~~~~~~~~~~~~~~~Wd~~~~G~~vLla~~ 283 (498)
T PLN02613 238 AAWLYKATGEKKYLNYVISNKGWSQAVNEFSWDNKFAGAQALLASE 283 (498)
T ss_pred HHHHHHHhCCHHHHHHHHhccccccCCCccCccchHHHHHHHHHHH
Confidence 99999999999999999986331 2345799999999999999975
No 8
>PLN02308 endoglucanase
Probab=100.00 E-value=3.6e-79 Score=599.74 Aligned_cols=280 Identities=59% Similarity=1.056 Sum_probs=256.8
Q ss_pred HHHHHHHHH--HHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCccc
Q 022932 9 LRCCCLFLF--LLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKF 86 (290)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky 86 (290)
|..-.|++| +++...+.++++|.++|++||+||++||||.+|++++++||++|++.||.+.++||+|||||||||+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~Y~~al~~sl~fy~~QRsG~lp~~~~~~Wr~~s~~~dg~~~~~DlsGGWyDAGD~~Ky 85 (492)
T PLN02308 6 LAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAGDNVKF 85 (492)
T ss_pred HHHHHHHHHHHHHccccccCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCcCCCCCCCeeeCCCCceeCCCcCee
Confidence 333344444 445555889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEc
Q 022932 87 NFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSV 166 (290)
Q Consensus 87 ~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~ 166 (290)
++|+++|+++|+|++++|++.+.++.+++|||||||+|||||||++ +|+||+|||++..||.+|++||+++.+|++|.|
T Consensus 86 ~~p~a~s~t~L~w~~~e~~~~~~~e~~~~ldeikw~~D~llkm~~~-~~~vy~qVg~~~~dh~~W~~Pe~~~~~R~~y~~ 164 (492)
T PLN02308 86 GFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAI-PNVVYVQVGDAYSDHNCWERPEDMDTLRTVYKI 164 (492)
T ss_pred cCchHHHHHHHHHHHHHhHhhhcchhHHHHHHHHHHHHHHHHhcCC-CCeEEEEecCCCCCccCCCChhHcCCcceEEec
Confidence 9999999999999999999999778999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHH
Q 022932 167 SASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAA 246 (290)
Q Consensus 167 ~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~ 246 (290)
+.++|||++++++|||||+|||||+++||+||++||++||++|+||+++|+.|.++.+...+++|++++++.||++|||+
T Consensus 165 ~~~~pgSd~a~~~AAAlA~as~vf~~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~~Y~~~s~~~DEl~WAAa 244 (492)
T PLN02308 165 DPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELLWGAA 244 (492)
T ss_pred CCCCCcchHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCcccCCCcCCCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876555456889987889999999999
Q ss_pred HHHHHcCChhHHHHHHHc----CCCCCCCcccccchhHHHHHHhhcc
Q 022932 247 WLFRATNDVTYYNFIKSV----GDDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 247 eLy~aTgd~~Yl~~a~~~----~~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
|||+||||++|+++++.+ +.......|+||+|.+++.+||+++
T Consensus 245 wLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~Lla~~ 291 (492)
T PLN02308 245 WLHKASRRREYREYIVKNEVILGAGDTINEFGWDNKHAGINVLISKE 291 (492)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCCCcccccccHHHHHHHHHHHH
Confidence 999999999999999873 3233456799999999999999984
No 9
>PLN02171 endoglucanase
Probab=100.00 E-value=4.8e-79 Score=612.18 Aligned_cols=269 Identities=54% Similarity=0.968 Sum_probs=251.6
Q ss_pred HHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHH
Q 022932 19 LLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLS 98 (290)
Q Consensus 19 ~~~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~ 98 (290)
++-..+.++++|.++|++||+||++||||.+|++++++||++|++.||.+.++||+|||||||||+||++|+|+|+++|+
T Consensus 20 ~s~~~~~~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~vDlsGGwyDAGD~vKf~~p~a~s~t~L~ 99 (629)
T PLN02171 20 LCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMS 99 (629)
T ss_pred cccccccCchhHHHHHHHHHHHHHHccCCCCCcccCCCCccCCCCCCCCcCcccCCCCceeCCCCceeccchHHHHHHHH
Confidence 34445788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHH
Q 022932 99 WSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVA 176 (290)
Q Consensus 99 w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~ 176 (290)
|+++||++.| .++++++|||||||+|||||||++ +|+||+|||+++.||.+|++||+++.+|++|+|++++|||+++
T Consensus 100 w~~~e~~~~~~~~g~~~~~Ldeikw~~Dyllk~~~~-~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~i~~~~pgSd~a 178 (629)
T PLN02171 100 WSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPE-PNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLA 178 (629)
T ss_pred HHHHHhHHHHhhcCCcHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCccccCcCChhHccccceeEEecCCCCchHHH
Confidence 9999999999 788999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChh
Q 022932 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVT 256 (290)
Q Consensus 177 ~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~ 256 (290)
+++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++. ..++|+|.++|.||++|||+|||+||||++
T Consensus 179 ~e~AAAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~-~~~~Y~s~s~y~DEl~WAAawLy~ATgd~~ 257 (629)
T PLN02171 179 GETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITV-AQKYYRSVSGYGDELLWAAAWLYQATNNQY 257 (629)
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc-cCCccCCCCCccHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999999999999876664 678999867899999999999999999999
Q ss_pred HHHHHHHcCC-----CCCCCcccccchhHHHHHHhhcc
Q 022932 257 YYNFIKSVGD-----DGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 257 Yl~~a~~~~~-----~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
|+++++++.. ......|+||+|.+++++|++++
T Consensus 258 Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~ 295 (629)
T PLN02171 258 YLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKF 295 (629)
T ss_pred HHHHHHHHHHhhccCcccCccccccccchHHHHHHHHH
Confidence 9999987522 12335799999999999999875
No 10
>PLN03009 cellulase
Probab=100.00 E-value=7.2e-78 Score=592.32 Aligned_cols=265 Identities=62% Similarity=1.103 Sum_probs=246.2
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLE 103 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e 103 (290)
..++++|+++|++||+||++||||.+|++++++||++|++.||.+.++||+|||||||||+||++|+|+|+++|+|++++
T Consensus 23 ~~~~~~Y~~al~~Sl~Fy~aQRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Ky~~p~a~s~~~L~w~~~~ 102 (495)
T PLN03009 23 ESNQHDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVIE 102 (495)
T ss_pred ccCchhHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCcCCCCCcccccCCCcceeCCCCceeccchHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHH
Q 022932 104 YGKKM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAA 182 (290)
Q Consensus 104 ~~~~~-~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAa 182 (290)
|++.+ .+++|+||||||||+|||||||+. +|.||+|||++..||.+|++||+++.+|++|.|+.++|+|++++++|||
T Consensus 103 f~d~~~~~~~~diLdeikw~~D~llkm~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~is~~~p~sd~a~~~AAa 181 (495)
T PLN03009 103 FGDLMPSSELRNSLVAIRWATDYLLKTVSQ-PNRIFVQVGDPIADHNCWERPEDMDTPRTVYAVNAPNPASDVAGETAAA 181 (495)
T ss_pred hHhhCCccccHHHHHHHHHHHHHHHHcccC-cCeEEEEeCCCCCCcccCcChhhcCCCCeEEEecCCCCccHHHHHHHHH
Confidence 99999 679999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCC--CCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHH
Q 022932 183 LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSL--GSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNF 260 (290)
Q Consensus 183 lA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~--~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~ 260 (290)
||++|||||++||+||++||++||++|+||+++|+.|.++. ..+..++|++++++.||++|||+|||++|||++|+++
T Consensus 182 lA~as~vfk~~D~~YA~~ll~~Ak~ly~~a~~~~g~y~~~~~~~~g~~~~Y~~~s~~~DE~~WAAawLy~aTgd~~Yl~~ 261 (495)
T PLN03009 182 LAASSMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNDDIKDGVCPFYCDFDGYQDELLWGAAWLRRASGDDSYLNY 261 (495)
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCccccCccccCcCCcccccHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999999999997642 2234678988677999999999999999999999999
Q ss_pred HHHc----CCCCCCCcccccchhHHHHHHhhcc
Q 022932 261 IKSV----GDDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 261 a~~~----~~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
++.. +.......|+||+|.+++.+||+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 294 (495)
T PLN03009 262 IENNGETLGANDNINEFGWDNKHAGLNVLVSKE 294 (495)
T ss_pred HHHhhhhhcCCCCCCCCCCccHHHHHHHHHHHh
Confidence 9864 2223345799999999999999864
No 11
>PLN02345 endoglucanase
Probab=100.00 E-value=1.4e-77 Score=585.51 Aligned_cols=253 Identities=52% Similarity=0.949 Sum_probs=237.8
Q ss_pred HHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHccccc--Cc
Q 022932 33 ALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GP 110 (290)
Q Consensus 33 ~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~--~~ 110 (290)
+|++||+||++||||.+ ++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++||++.| .+
T Consensus 1 aL~~sl~Fy~aQrsG~l-~~~~~~Wrgds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~t~L~w~~~e~~~~~~~~~ 79 (469)
T PLN02345 1 ALKIALQFFDIQKSGKL-ENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAAN 79 (469)
T ss_pred CHHHHHHHHHHhcCCCC-ccCCCCccccccccccccccCcCCCCceeCCCCceeCchhHHHHHHHHHHHHHhhhhhhccc
Confidence 58999999999999999 6789999999999999999999999999999999999999999999999999999999 78
Q ss_pred cHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccc
Q 022932 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (290)
Q Consensus 111 ~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~ 190 (290)
++|+||||||||+|||+|||++ +|+||+|||+++.||.+|++||+++.+||+|.|+.++|||++++++|||||++|+||
T Consensus 80 ~~~~~ldelkw~~Dyllk~~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~~~~~~pgsd~a~~~AAAlA~as~vf 158 (469)
T PLN02345 80 QLDSAKDSLKWITDYLINAHPS-ENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVF 158 (469)
T ss_pred chHHHHHHHhHHHHHHHHhcCC-CCeEEEEecCCCCCcccCCChhhcCCcceEEecCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc-----C
Q 022932 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV-----G 265 (290)
Q Consensus 191 ~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~-----~ 265 (290)
|++||+||++||++||++|+||++||+.|..+++. ..++|+| +++.||++|||+|||++|||++|+++++.. .
T Consensus 159 k~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~-~~~~Y~s-~~~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~ 236 (469)
T PLN02345 159 KSSDSTYSDTLLKHAKQLFNFADKYRGSYSESIPE-VQDYYNS-TGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFA 236 (469)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCc-cCCCCCC-cccccHHHHHHHHHHHHhCCHHHHHHHHhhhhhhhc
Confidence 99999999999999999999999999999766554 5689999 999999999999999999999999999531 2
Q ss_pred CCCCCCcccccchhHHHHHHhhcc
Q 022932 266 DDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 266 ~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
.......|+||||.+++++||+++
T Consensus 237 ~~~~~~~~~WD~k~~g~~~lla~~ 260 (469)
T PLN02345 237 DWGSPTWFSWDDKLAGTQVLLSRL 260 (469)
T ss_pred ccCCCceecCcchHHHHHHHHHHH
Confidence 222345699999999999999986
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=3.2e-70 Score=533.08 Aligned_cols=259 Identities=48% Similarity=0.782 Sum_probs=230.6
Q ss_pred hHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCC-------CcccccccceecCCCCcccccchhHHHHHHHHHH
Q 022932 29 NYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGL-------FAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWST 101 (290)
Q Consensus 29 ~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~-------~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~ 101 (290)
+|+++|++||+||++||||.+|..++++||+++++.|+. +..+||+|||||||||+||++|+++++++|+|++
T Consensus 1 ~Y~~~l~~sl~f~~~QR~G~~~~~~~~~w~~~s~~~d~~~~~~~~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~ 80 (444)
T PF00759_consen 1 NYKEALKKSLRFYYAQRSGTLPEDYAIPWRRDSCHTDGADSGPNNSGTTIDLSGGWYDAGDYGKYTFPMAYSVTMLAWSA 80 (444)
T ss_dssp -HHHHHHHHHHHHHHTBSBSTTTTTSGTTEB-BSTTTTCTCTSTTTSCEEB---SB-SSSSS-EEHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCcCCCcccccccCCcccCCCccccccccccccccccCceeecCCcceecccHHHHHHHHHHHH
Confidence 699999999999999999999998999999999887764 3456999999999999999999999999999999
Q ss_pred HHccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHH
Q 022932 102 LEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 179 (290)
Q Consensus 102 ~e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~ 179 (290)
+|+.+.+ +|++||||||||||+|||||||++ +|+||+|||++..||..|.+||.++..|+.+.+...+|||++++++
T Consensus 81 ~e~~~~~e~~~~~~dllde~kwg~D~llkm~~~-~~~~~~qvgdg~~~h~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 159 (444)
T PF00759_consen 81 YEFFPAYESGNGIPDLLDEAKWGLDWLLKMQDS-DGTFYAQVGDGGVDHKVWGRPEIMPDDDPSYRYDAPNPGTDATAEF 159 (444)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHHHTBSC-TTEEEEEESTHHHHHTEESTGGGTGSGESEEEEETTB-EHHHHHHH
T ss_pred HHhHHHhhcCCcHHHHHHHHHHHHHHHHhccCC-CCceeeeccCccchhhcccCCCCCCCCCCcceEecCCCchHHHHHH
Confidence 9999998 999999999999999999999999 9999999999999999999999999999998888888899999999
Q ss_pred HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHH
Q 022932 180 AAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYN 259 (290)
Q Consensus 180 AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~ 259 (290)
|||||+|||||+++||+||++||++|+++|+|+++||+.|.++.....+++|++ +++.||++|||+|||++||+++|++
T Consensus 160 AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~-~~~~De~~wAA~~Ly~aTg~~~Y~~ 238 (444)
T PF00759_consen 160 AAALAAASRVFKDFDPAYAAQCLKAAKEAYAFAKKNPGVYSDNPQPNGGGFYNS-SGYEDELAWAAAELYRATGDESYLD 238 (444)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSTTHGGGTSTCTTTTTSHC-S-SHHHHHHHHHHHHHHHT-HHHHH
T ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCcccccCCcccC-CCcccHHHHHHHHHHHhcCcHHHHH
Confidence 999999999999999999999999999999999999999887664457899999 9999999999999999999999999
Q ss_pred HHHHcCCCC------CCCcccccchhHHHHHHhhcc
Q 022932 260 FIKSVGDDG------GTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 260 ~a~~~~~~~------~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+++++.... ....++||++..+++++|+++
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~la~~ 274 (444)
T PF00759_consen 239 YAKEYYDDLEASQWSNEWSFSWDNKAAGAQLLLAKL 274 (444)
T ss_dssp HHHHHCCTSSBSTTSSSSSSCTTBSHHHHHHHHHHH
T ss_pred HHHHhHHhhcccccccccccchhhhhhhhhHHHHhc
Confidence 999964311 124799999999999999874
No 13
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=97.55 E-value=0.0056 Score=58.35 Aligned_cols=147 Identities=18% Similarity=0.100 Sum_probs=96.8
Q ss_pred CCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhc-ccCCC-CceeEeeCCCCCCCCCCCCCCCCCC
Q 022932 82 DNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC-ATATP-GKLYVGVGDPNADHKCWERPEDMDT 159 (290)
Q Consensus 82 D~~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~-~~~~~-g~~y~~Vg~~~~Dh~~w~~Pe~~~~ 159 (290)
|..|++..+|..++.++.++... +-+..|+.++-+++||++- .++ + |+++..+.. | +.|.+.
T Consensus 47 ~~~k~~~~~ar~i~~~a~a~~~~------~~~~~l~~A~~~~~fl~~~~~d~-~~Gg~~~~~~~---~----g~~~~~-- 110 (384)
T cd00249 47 DTDRRLWLQARQVYCFAVAYLLG------WRPEWLEAAEHGLEYLDRHGRDP-DHGGWYFALDQ---D----GRPVDA-- 110 (384)
T ss_pred CCCCeEEEecHHHHHHHHHHHhc------CChhHHHHHHHHHHHHHHhCcCC-CCCCEEEEEcC---C----CCCccc--
Confidence 45799999999999998887643 4577899999999999994 444 5 888887741 1 122211
Q ss_pred ccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc----cCCCC-CCCCCCcCcccCCC
Q 022932 160 VRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY----RGAYS-DSLGSAVCPFYCSY 234 (290)
Q Consensus 160 ~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~----~~~y~-~~~~~~~~~~Y~s~ 234 (290)
. +....-+-++-||+.++++.. || ++|+.|+++++++.++ .+.+. ...++ .+.+.+
T Consensus 111 ~----------~~l~~~a~~l~ala~~~~at~--d~----~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~--~~~~~~- 171 (384)
T cd00249 111 T----------KDLYSHAFALLAAAQAAKVGG--DP----EARALAEETIDLLERRFWEDHPGAFDEADPG--TPPYRG- 171 (384)
T ss_pred c----------cchHHHHHHHHHHHHHHHhcC--CH----HHHHHHHHHHHHHHHHhccCCCcccCCCCCC--CCCCCC-
Confidence 1 112334667788888888874 54 5667777777777664 12222 11111 112233
Q ss_pred CCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 235 SGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 235 ~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
.+-..-++.|.++|+.+||++.|++.+++
T Consensus 172 ~~~~~h~~~all~l~~~tgd~~~~~~A~~ 200 (384)
T cd00249 172 SNPHMHLLEAMLAAYEATGEQKYLDRADE 200 (384)
T ss_pred CChhHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 22333457789999999999999998876
No 14
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms]
Probab=96.52 E-value=0.042 Score=52.04 Aligned_cols=112 Identities=21% Similarity=0.224 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccC
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRK 192 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~ 192 (290)
|.++..+|=-+||+++.+++ +|.+=.. +..+.+|-+.-+.. .| .+|-+|+.|+.||+
T Consensus 241 ~~~~~dVK~sldym~~~rfp-sGNyP~s--------------~~~~~drLVhWcHG-Ap------Gv~~~L~kAy~VF~- 297 (403)
T KOG2787|consen 241 PALLKDVKGSLDYMIQNRFP-SGNYPSS--------------EGNKRDRLVHWCHG-AP------GVAYTLAKAYQVFK- 297 (403)
T ss_pred hhHHHhhhhHHHHHHHccCC-CCCCCcc--------------cCCCcceeeeeccC-Cc------hHHHHHHHHHHHhh-
Confidence 45888999999999999998 6642222 22334565554422 23 35678999999998
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHc--cCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932 193 GDPRYASLLLRTAKNVLQFAMQY--RGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (290)
Q Consensus 193 ~D~~yA~~~L~~A~~~~~~a~~~--~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~ 264 (290)
...|-+...++|+-.|+...-. +|..+.. ++. ..+=+-||+.|||.+|+-.|+.+
T Consensus 298 -Eekyl~aa~ecadvVW~rGlLkkg~GichGv----aGN------------aYvFLsLyRLT~d~kYlyRA~kF 354 (403)
T KOG2787|consen 298 -EEKYLEAAMECADVVWKRGLLKKGVGICHGV----AGN------------AYVFLSLYRLTGDMKYLYRAKKF 354 (403)
T ss_pred -HHHHHHHHHHHHHHHHHhhhhhcCCcccccc----cCc------------hhhhHhHHHHcCcHHHHHHHHHH
Confidence 5679899999999999976544 4444321 122 34557899999999999988874
No 15
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=96.45 E-value=0.05 Score=51.81 Aligned_cols=119 Identities=16% Similarity=0.144 Sum_probs=76.7
Q ss_pred HHHHHHHHHh-cccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHH
Q 022932 119 IRWATDYLLK-CATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRY 197 (290)
Q Consensus 119 ~kwg~D~llk-~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~y 197 (290)
++-.++|+++ +.+...|+++..+.. | +.|.+ + .+.++.. +-.+-++|.+++++. +
T Consensus 16 ~~~~~~fw~~~~~d~~~gg~~~~l~~---~----g~~~~-~-~k~~~~~----------ar~i~~~a~a~~~~~--~--- 71 (384)
T cd00249 16 LEDLLPFWLEAGLDREAGGFFECLDR---D----GQPFD-T-DRRLWLQ----------ARQVYCFAVAYLLGW--R--- 71 (384)
T ss_pred HHHHHHHHHhcCCCCCCCCeEEEECC---C----CCCCC-C-CCeEEEe----------cHHHHHHHHHHHhcC--C---
Confidence 4567777777 444447889988864 2 34543 2 3345542 577889999999984 3
Q ss_pred HHHHHHHHHHHHHHHHHc---c--CCCCCCCCCCcCcccCCCCCcch--HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 198 ASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGYKD--ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 198 A~~~L~~A~~~~~~a~~~---~--~~y~~~~~~~~~~~Y~s~~~~~D--e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
.++|+.|++.++|+.++ + |.|.......+.+.-.. ....| -.++|.+++|++||++.|++.+++
T Consensus 72 -~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~~~g~~~~~~-~~l~~~a~~l~ala~~~~at~d~~~l~~A~~ 142 (384)
T cd00249 72 -PEWLEAAEHGLEYLDRHGRDPDHGGWYFALDQDGRPVDAT-KDLYSHAFALLAAAQAAKVGGDPEARALAEE 142 (384)
T ss_pred -hhHHHHHHHHHHHHHHhCcCCCCCCEEEEEcCCCCCcccc-cchHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34788999999999986 2 33322111001111111 11222 378999999999999999999876
No 16
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=96.06 E-value=0.059 Score=54.39 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=86.3
Q ss_pred ccceecCCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCC-CCCCCCCC
Q 022932 74 TGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDP-NADHKCWE 152 (290)
Q Consensus 74 ~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~-~~Dh~~w~ 152 (290)
.|.++.-.|.+|+..-.+++. .. .+=+.+.+.+..-+|.|+++|.+ ||++-...... ......|.
T Consensus 53 ~~~~~~~~~~g~wl~a~a~~~-------~~------~~D~~l~~~~d~~V~~l~~~Q~~-dGYl~~~~~~~~~~~~~~w~ 118 (520)
T PF07944_consen 53 PGWWFRGHDVGKWLEAAAYAY-------AY------TGDPELKAKADEIVDELAAAQQP-DGYLGTYPEERNFNPDDRWA 118 (520)
T ss_pred CCCccCCCcHHHHHHHHHHHH-------HH------CCCHHHHHHHHHHHHHHHHhccC-CceecccccccccccccCCC
Confidence 455555567777765433332 21 12267899999999999999998 99653322211 01112344
Q ss_pred CCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccC
Q 022932 153 RPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYC 232 (290)
Q Consensus 153 ~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~ 232 (290)
+ + .-..|.+ +.+..+|-..++.-. .+++|+.|+++-+|....-........ ....++
T Consensus 119 ~-~----~he~Y~~----------~~ll~gl~~~y~~tG------~~~~L~v~~k~ad~~~~~~~~~~~~~~--~~~~~~ 175 (520)
T PF07944_consen 119 P-D----MHELYCL----------GKLLEGLIDYYEATG------NERALDVATKLADWVYRRLSRLGPEPG--QKMGYP 175 (520)
T ss_pred C-C----ccceehH----------hHHHHHHHHHHHHHC------cHHHHHHHHHHHHHHHHHhccCCHHHh--hccccc
Confidence 4 1 1113432 344445544444432 268899999999988332222211100 111222
Q ss_pred CCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932 233 SYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (290)
Q Consensus 233 s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~ 264 (290)
. . -++..+-++||+.|||++||+.|+.+
T Consensus 176 ~-~---~~i~~~l~~LY~~Tgd~~yL~lA~~f 203 (520)
T PF07944_consen 176 E-H---GGINEALVRLYEITGDERYLDLAEYF 203 (520)
T ss_pred c-c---chHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 1 24568999999999999999999875
No 17
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=95.70 E-value=0.04 Score=56.75 Aligned_cols=85 Identities=22% Similarity=0.191 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHH
Q 022932 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR--GAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFR 250 (290)
Q Consensus 173 t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~--~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~ 250 (290)
|+-.|.+++|||.|++++. | .++++.|+++-+|..++- +......-+ +..-+..-..+.--++||.+.||.
T Consensus 410 t~wNglmi~aLa~a~~~~~--d----~~~l~~A~~~~~fi~~~l~~~rl~~~~~~-G~a~~~g~leDYA~~i~gll~lye 482 (667)
T COG1331 410 TDWNGLMIAALAEAGRVLG--D----PEYLEAAERAADFILDNLYVDRLLRRYRG-GEAAVAGLLEDYAFLILGLLALYE 482 (667)
T ss_pred eccHHHHHHHHHHHHHHcC--C----hHHHHHHHHHHHHHHHhhcccchheeeec-CcccccccchhHHHHHHHHHHHHH
Confidence 4567999999999999996 4 457889999999888761 211000000 111121113334468999999999
Q ss_pred HcCChhHHHHHHHc
Q 022932 251 ATNDVTYYNFIKSV 264 (290)
Q Consensus 251 aTgd~~Yl~~a~~~ 264 (290)
+|++.+||+.|++.
T Consensus 483 ~t~d~~yL~~A~~L 496 (667)
T COG1331 483 ATGDLAYLEKAIEL 496 (667)
T ss_pred hhCcHHHHHHHHHH
Confidence 99999999999873
No 18
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=95.15 E-value=0.46 Score=45.88 Aligned_cols=146 Identities=20% Similarity=0.192 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCC--CCceeEeeCCCCCCCCCCCCCCCCCCccceEEcC
Q 022932 90 MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATAT--PGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS 167 (290)
Q Consensus 90 ~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~--~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~ 167 (290)
+++-+..++-+|+...+. +...|..|+.++--.+++.+-.++. .|+++=++.+ .+ .-..++-
T Consensus 90 ~aw~~la~l~aye~t~~~-~~~~~~yL~~A~~i~~~~~~~wd~~~cgGGi~W~~~~-----------~~---~~~~~Kn- 153 (370)
T PF03663_consen 90 NAWWALALLRAYELTGDQ-PSDNPKYLDLAKEIFDFLISGWDDTSCGGGIWWSIDD-----------TN---SGYDYKN- 153 (370)
T ss_dssp HHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHTB-SGG-GS-BEEET------------------TEEEEEE-
T ss_pred HHHHHHHHHHHHHhhCCC-cchHHHHHHHHHHHHHHHHHhcCCccCCCCccccccc-----------cC---CCCCccc-
Confidence 344444444444433221 2445689999999999999776662 1555444321 11 1122331
Q ss_pred CCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHH----ccC--CCCCCCCC-CcCcccCCCCCcc--
Q 022932 168 ASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQ----YRG--AYSDSLGS-AVCPFYCSYSGYK-- 238 (290)
Q Consensus 168 ~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~----~~~--~y~~~~~~-~~~~~Y~s~~~~~-- 238 (290)
..| .+.++...|.-+++-+ | +++|+.|++.|+|..+ .|. .+.+.+.. ..+..... ..+.
T Consensus 154 ---a~s--N~~~~~laarL~~~t~--~----~~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~~~-~~~TYN 221 (370)
T PF03663_consen 154 ---AIS--NGPAAQLAARLYRITG--D----QTYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNINK-TKWTYN 221 (370)
T ss_dssp ---HHH--HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-TT----HHH
T ss_pred ---ccc--hHHHHHHHHHHHHhcC--C----hHHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcCCC-ceechH
Confidence 122 2333333333334332 3 3699999999999999 243 23332210 00111111 2222
Q ss_pred -hHHHHHHHHHHHHcCCh-hHHHHHHH
Q 022932 239 -DELLWGAAWLFRATNDV-TYYNFIKS 263 (290)
Q Consensus 239 -De~~wAA~eLy~aTgd~-~Yl~~a~~ 263 (290)
--++-|+++||++|+++ +|++.+++
T Consensus 222 qG~~l~a~~~Ly~~T~~~~~yl~~A~~ 248 (370)
T PF03663_consen 222 QGVFLGAAAYLYNATNDEQTYLDRAEK 248 (370)
T ss_dssp HHHHHHHHHHHHHHH--H-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 35889999999999777 99999887
No 19
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=92.93 E-value=0.39 Score=45.44 Aligned_cols=141 Identities=23% Similarity=0.240 Sum_probs=81.8
Q ss_pred ccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhccc-CCCCceeEeeCCCCCCCCCCCCCCCCCCccce
Q 022932 85 KFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCAT-ATPGKLYVGVGDPNADHKCWERPEDMDTVRSV 163 (290)
Q Consensus 85 Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~-~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~ 163 (290)
|++.-++=-+++.+.++. . +.|+.|+-++.|++||.+... +.+|++++.+-++ + |.+. .+..
T Consensus 18 k~~~~q~R~~~~fa~a~~-~------g~~~~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~~-------~-~~~~--~~~~ 80 (346)
T PF07221_consen 18 KRLWVQARQLYTFARAYR-L------GRPEYLELAEHGFDFLRKHFRDPEYGGWYRSLDDG-------G-PLDP--QKDL 80 (346)
T ss_dssp EEHHHHHHHHHHHHHHHH-T------TSHHHHHHHHHHHHHHHHTTBTTTTSSBSSEEETT-------E-EEE----EEH
T ss_pred ceeeeeHHHHHHHHHHHh-c------CchhHHHHHHHHHHHHHHhcccCCCCCEEEEeCCC-------C-CCcc--ccch
Confidence 566666666666665554 2 377899999999999997764 4357888777331 1 2110 1112
Q ss_pred EEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---c--CCCCCCCCCCcCcccCCCCCcc
Q 022932 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGYK 238 (290)
Q Consensus 164 ~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~---~--~~y~~~~~~~~~~~Y~s~~~~~ 238 (290)
| .-+-++-+||. +++. .++ +.++.|++++++..++ | +.|....+....+. ....
T Consensus 81 Y----------~~af~l~ala~-~~~t--g~~----~~~~~A~~~~~~l~~~~~d~~~g~~~~~~~~~~~~~----r~~n 139 (346)
T PF07221_consen 81 Y----------DQAFALLALAE-ARAT--GDP----EALELAEQTLEFLERRFWDPEGGGYRESFDPDWSPP----RGQN 139 (346)
T ss_dssp H----------HHHHHHHHHHH-HHCT--T-T----THHHHHHHHHHHHHHHTEETTTTEE--EETTTSSCB----EEHH
T ss_pred H----------HHHHHHHHHHH-HHHh--CCh----hHHHHHHHHHHHHHHHhcccccCcceeccCCccccC----CCCC
Confidence 2 11223334444 3333 343 4578889999999876 2 22332111000110 0122
Q ss_pred h--HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 239 D--ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 239 D--e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
+ -++-|.+.|+++|++..|++.+++
T Consensus 140 ~~mhl~eA~l~l~~~~~~~~~~~~a~~ 166 (346)
T PF07221_consen 140 PHMHLLEAFLALYEATGDPRYLDRAEE 166 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 3 468888999999999999999876
No 20
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=92.71 E-value=9.8 Score=39.45 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCC-CCcc-cccchhHHHHHHHHHHHHcc
Q 022932 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAG-DNVK-FNFPMAFTTTMLSWSTLEYG 105 (290)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAG-D~~K-y~~~~a~s~~~L~w~~~e~~ 105 (290)
..+...+.+++.|...++. . +....|+... .---.|||-=.. +.+. .+--++.++..|+ ...
T Consensus 325 ~~~~~~l~ka~~wL~~~Q~-~---~~~gdw~~~~--------~~~~~GGW~fs~~~~~~pd~d~Ta~~l~AL~----~~~ 388 (634)
T cd02892 325 PEFDPALKKALDWLLESQI-L---DNPGDWKVKY--------RHLRKGGWAFSTANQGYPDSDDTAEALKALL----RLQ 388 (634)
T ss_pred ccchHHHHHHHHHHHHHHc-C---CCCCchhhhC--------CCCCCCCCCCCCCCCCCCCcCchHHHHHHHH----Hhh
Confidence 3688899999999987766 1 1112333211 000257772110 1110 1113445544442 222
Q ss_pred cccCccHHHHHHHHHHHHHHHHhcccCCCCceeE-eeCCCCCCCCCC---CCCCCCCCccceEEcCCCCcchhHHHHHHH
Q 022932 106 KKMGPELQNARAAIRWATDYLLKCATATPGKLYV-GVGDPNADHKCW---ERPEDMDTVRSVYSVSASNPGSDVAGETAA 181 (290)
Q Consensus 106 ~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~-~Vg~~~~Dh~~w---~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AA 181 (290)
.....+.+...+.++=++|||++||.+ +|++.. ..+.. ..| .-|-++... +-.+.|..+.|+.+..
T Consensus 389 ~~~~~~~~~~~~~i~~Av~wLl~~Qn~-dGgf~~y~~~~~----~~~~~~~~p~e~~g~-----~~~d~~~~~~Ta~~l~ 458 (634)
T cd02892 389 ELPPFGEKVSRERLYDAVDWLLGMQNS-NGGFAAFEPDNT----YHWLENLNPFEDFGD-----IMIDPPYVECTGSVLE 458 (634)
T ss_pred ccCCcchhhHHHHHHHHHHHHHhccCC-CCCEeeecCCCc----hhhHhhcCchhhhcc-----cccCCCCcchHHHHHH
Confidence 111112333457888899999999998 888642 11110 011 113221110 1112245567787777
Q ss_pred HHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccC
Q 022932 182 ALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRG 217 (290)
Q Consensus 182 alA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~ 217 (290)
+|+....... .+..+..+..+++-+|+.+++.
T Consensus 459 aL~~~~~~~~----~~r~~i~~~i~rAv~~L~~~Q~ 490 (634)
T cd02892 459 ALGLFGKLYP----GHRREIDPAIRRAVKYLLREQE 490 (634)
T ss_pred HHHHhcccCc----chHHHHHHHHHHHHHHHHHccC
Confidence 7876655443 2223666788889999998753
No 21
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=86.39 E-value=9.8 Score=37.18 Aligned_cols=125 Identities=22% Similarity=0.237 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccccc
Q 022932 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR 191 (290)
Q Consensus 112 ~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~ 191 (290)
.++-++.+.+|++||-+.++..+|+-|.-+... +.|.+.+.+ +| ..+=+.||.|+..-
T Consensus 73 ~~~~~~~v~hG~~y~~~~~R~~~gg~~~~~~~d-------g~~~Dat~d--~Y------------~haFallA~A~~a~- 130 (388)
T COG2942 73 RGPWLDAVAHGIAYLARVGRDPEGGWYFALDND-------GGPVDATKD--LY------------GHAFALLAAAHAAT- 130 (388)
T ss_pred CccHHHHHHhHHHHHHhcCcCCCCCeEEEecCC-------CCcccccHh--HH------------HHHHHHHHHHHHHh-
Confidence 455899999999999999887455555544431 445554322 22 23335555555322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH---ccC-CCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 192 KGDPRYASLLLRTAKNVLQFAMQ---YRG-AYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 192 ~~D~~yA~~~L~~A~~~~~~a~~---~~~-~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
..+.-|.++++.|-++++-... ||- .+..+.+. ..+. ++ +=.--++=|=+-=|.+||++.|++.+.+
T Consensus 131 -a~~~~a~~~~~~a~~~l~~~~~~~~~pl~~~e~~~~~-~~pl-~s--Np~MHl~EA~LA~~e~~~~~~~~~~A~~ 201 (388)
T COG2942 131 -AGPPRADELLDEALDVLERRFWREEHPLGGFEEDNPG-SAPL-GS--NPHMHLLEAMLAAYEATGEKTWLDRADR 201 (388)
T ss_pred -cCChhHHHHHHHHHHHHHHHHhhhcCCcccccccCCC-CCcc-CC--CcchHHHHHHHHHHhccCchhHHHHHHH
Confidence 3445688888888888875433 332 23222221 2222 33 1112222222334778999999998866
No 22
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=84.53 E-value=55 Score=34.12 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHH
Q 022932 117 AAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPR 196 (290)
Q Consensus 117 de~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~ 196 (290)
+-++=++|||+.||.+ ||++..-..+.+..-..+.+|.+.-.. ..+ +.|..+.|+.+.-+|+..... ++.
T Consensus 400 ~~l~~av~~Ll~~Qn~-dGGw~~y~~~~~~~~l~~~~~~~~f~~---~~~--d~~~~d~Ta~~l~aL~~~~~~----~~~ 469 (634)
T TIGR03463 400 ARLQDAVEFILSRQNE-DGGFGTYERQRGPRVLELLNPSEMFST---CMT--DVSYVECTSSCLQALAAWRKH----HPH 469 (634)
T ss_pred HHHHHHHHHHHHhcCC-CCCEeccCCCCcHHHHhcCChHHhhcc---ccc--CCCcCcHHHHHHHHHHHHhhc----Ccc
Confidence 5667799999999998 887653322211110112344432110 111 224457778777778776432 222
Q ss_pred H-HHHHHHHHHHHHHHHHHcc
Q 022932 197 Y-ASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 197 y-A~~~L~~A~~~~~~a~~~~ 216 (290)
+ +.++..+.+++-+|+++.+
T Consensus 470 ~~~~~i~~ai~rav~~L~~~Q 490 (634)
T TIGR03463 470 VPDGRITRAISRGVRFLRSRQ 490 (634)
T ss_pred hhhhHHHHHHHHHHHHHHHhc
Confidence 2 4566666777888888764
No 23
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.87 E-value=14 Score=37.50 Aligned_cols=147 Identities=18% Similarity=0.225 Sum_probs=81.3
Q ss_pred ccccee----cCCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCce--eEeeCCCCC
Q 022932 73 LTGGYY----DAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKL--YVGVGDPNA 146 (290)
Q Consensus 73 l~GGWy----DAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~--y~~Vg~~~~ 146 (290)
..|||. +--|.+|+... .+|++.. .+-|.+..-|.--+|=+-+.|++ ||++ |.|. ..
T Consensus 54 ~r~g~~~q~f~dsdlgkwlea-------~A~~l~~------~~dp~Lekr~D~vi~~~a~~Qde-dGYl~~~~q~---~~ 116 (589)
T COG3533 54 FRGGWETQMFWDSDLGKWLEA-------AAYSLAN------KGDPELEKRIDEVVEELARAQDE-DGYLGGWFQA---DF 116 (589)
T ss_pred ccccceeeeeccccHHHHHHH-------HHHHHhc------CCCHHHHHHHHHHHHHHHHhhcc-CCcccceeec---cC
Confidence 458886 22355555443 4444432 33455555566667888899998 8875 3332 22
Q ss_pred CCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCC
Q 022932 147 DHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSA 226 (290)
Q Consensus 147 Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~ 226 (290)
+...|+.-. ..+..|. +.-.+++++| ..++= =-.++|.-+.++=+++.+--+.-.+
T Consensus 117 pe~Rw~nlr---~~HelY~---------aghLieg~va-~~qaT------Gkr~lldV~~rlADhi~tvfgp~~~----- 172 (589)
T COG3533 117 PEERWGNLR---PNHELYC---------AGHLIEGGVA-AHQAT------GKRRLLDVVCRLADHIATVFGPEED----- 172 (589)
T ss_pred chhhhhccc---cchHHHH---------hHHHHhhhhH-HHHhh------CcchHHHHHHHHHHhhhhhcCcccc-----
Confidence 223333211 1122332 1122233333 11111 1256788888877777764221111
Q ss_pred cCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932 227 VCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (290)
Q Consensus 227 ~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~ 264 (290)
....|+. . -|+-.|-++||+.||+++||+-++.+
T Consensus 173 q~~g~~g-H---~eielAl~~Ly~~Tg~~rYL~LA~~F 206 (589)
T COG3533 173 QVPGYCG-H---PEIELALAELYRLTGDQRYLDLARRF 206 (589)
T ss_pred ccccccC-C---CchhHHHHHHHHHhcChHHHHHHHHH
Confidence 2234665 3 37788999999999999999998874
No 24
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=75.30 E-value=3.2 Score=40.11 Aligned_cols=84 Identities=27% Similarity=0.253 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcc-cC-----CCCCcc-----hHHH
Q 022932 174 DVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPF-YC-----SYSGYK-----DELL 242 (290)
Q Consensus 174 ~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~-Y~-----s~~~~~-----De~~ 242 (290)
|--+-.+-++-.++.+-.+. |.=..++|+.|+++|++.... +.+.. . ++|. .. ....++ -..+
T Consensus 88 DD~aw~~la~l~aye~t~~~-~~~~~~yL~~A~~i~~~~~~~---wd~~~-c-gGGi~W~~~~~~~~~~~Kna~sN~~~~ 161 (370)
T PF03663_consen 88 DDNAWWALALLRAYELTGDQ-PSDNPKYLDLAKEIFDFLISG---WDDTS-C-GGGIWWSIDDTNSGYDYKNAISNGPAA 161 (370)
T ss_dssp HHHHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHT---B-SGG---GS-BEEET----TEEEEEEHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCC-cchHHHHHHHHHHHHHHHHHh---cCCcc-C-CCCccccccccCCCCCcccccchHHHH
Confidence 44455555555555544321 122338999999999999842 22110 0 1121 11 101222 3689
Q ss_pred HHHHHHHHHcCChhHHHHHHH
Q 022932 243 WGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 243 wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
-+++.||+.||+++|++.|++
T Consensus 162 ~laarL~~~t~~~~Yl~~A~~ 182 (370)
T PF03663_consen 162 QLAARLYRITGDQTYLDWAKK 182 (370)
T ss_dssp HHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHhcCChHHHHHHHH
Confidence 999999999999999999987
No 25
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=70.37 E-value=49 Score=31.01 Aligned_cols=114 Identities=16% Similarity=0.078 Sum_probs=68.5
Q ss_pred ccceecCCCCcccccc--------hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCC
Q 022932 74 TGGYYDAGDNVKFNFP--------MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPN 145 (290)
Q Consensus 74 ~GGWyDAGD~~Ky~~~--------~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~ 145 (290)
+|=|+-+.|+.++... .|+.+.-|+-.+...|+. ....+.+++.++--++.|.+.|++ +|. ++++-+
T Consensus 165 tGl~~h~~~~~~~~~~s~~~WsRG~gW~~~Gl~~~l~~lp~~-~~~~~~~~~~~~~~~~~l~~~q~~-~G~-w~~~~~-- 239 (336)
T PF07470_consen 165 TGLYYHGYTYQGYADWSDSFWSRGNGWAIYGLAEVLEYLPED-HPERDELLEIAKKLADALARYQDE-DGL-WYQDLD-- 239 (336)
T ss_dssp TSSBESEEETTSSSTTST--BHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHTTSTT-TSB-EBSBTT--
T ss_pred CCceeeccCCCCCcCcccccCcchhhHHHHHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHhcCCC-CCC-cceecC--
Confidence 5556555555555432 233343333333333331 235678899999999999999986 664 444432
Q ss_pred CCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 146 ADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASL-VFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 146 ~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~-v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
.|+ ...+ +-|.+++.+|.+|+.+-+ -+ .| .+++++.|+++|+.+.++
T Consensus 240 -------~~~-----~~~~------~etSatA~~a~~l~~gi~~g~--~d---~~~y~~~a~~a~~~l~~~ 287 (336)
T PF07470_consen 240 -------DPD-----PGNY------RETSATAMFAYGLLRGIRLGL--LD---PEEYRPAAEKALEALLSN 287 (336)
T ss_dssp -------TTT-----TTS-------BEHHHHHHHHHHHHHHHHTTS--ST---HHHHHHHHHHHHHHHHHC
T ss_pred -------CCC-----CCCc------ccHHHHHHHHHHHHHHHHcCC--Cc---cHHHHHHHHHHHHHHHhC
Confidence 121 0011 346677888888876432 22 22 578889999999999987
No 26
>PLN03012 Camelliol C synthase
Probab=68.71 E-value=1.7e+02 Score=31.36 Aligned_cols=162 Identities=14% Similarity=0.175 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCCCCCCCCCCcccccccceecC-CCCccccc--chhHHH-HHHHHHHH
Q 022932 28 PNYREALAKSLLFFQGQRSGR-LPKDQQITWRSNSGLSDGLFAHVDLTGGYYDA-GDNVKFNF--PMAFTT-TMLSWSTL 102 (290)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QRsG~-lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDA-GD~~Ky~~--~~a~s~-~~L~w~~~ 102 (290)
+.+...+.+++.|...+..-. .|.+..+..|+. . .|||-=. -|++ |.. -+|.++ ..|+.+..
T Consensus 435 ~~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~~---~---------~GgW~Fs~~~~g-yp~sD~TAe~Lka~lll~~~ 501 (759)
T PLN03012 435 NEIPDVLRRGHDFIKNSQVGENPSGDFKNMYRHI---S---------KGAWTFSDRDHG-WQASDCTAEGFKCCLLFSMI 501 (759)
T ss_pred ccchHHHHHHHHHHHHHhccCCCCChhhhhCCCC---C---------CCcccccCCCCC-CCCCCccHHHHHHHHHHHhc
Confidence 468999999999998777653 333322222221 1 3444322 1211 111 123332 12222321
Q ss_pred Hccccc-CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHH
Q 022932 103 EYGKKM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAA 181 (290)
Q Consensus 103 e~~~~~-~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AA 181 (290)
+... +..++ -+-++=++|||+.||.. +|++-.=-.+.+.....+.+|.+.-.+ + -|+ .|.++.|+.+.-
T Consensus 502 --~~~~~~~~~~--~~~l~~av~wlL~mQn~-dGGwaafe~~~~~~~le~lnp~E~F~d--~-mid--~~y~dcTa~~l~ 571 (759)
T PLN03012 502 --APDIVGPKMD--PEQLHDAVNILLSLQSK-NGGMTAWEPAGAPEWLELLNPTEMFAD--I-VIE--HEYNECTSSAIQ 571 (759)
T ss_pred --cccccccccc--HHHHHHHHHHHHhccCC-CCCEeeecCCcchHHHHhcChhhhhcC--e-ecC--CCcccHHHHHHH
Confidence 2111 22222 36778899999999998 887622211111111112334332111 1 233 356688888878
Q ss_pred HHHHhcccccCCCHHH-HHHHHHHHHHHHHHHHHcc
Q 022932 182 ALAAASLVFRKGDPRY-ASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 182 alA~as~v~~~~D~~y-A~~~L~~A~~~~~~a~~~~ 216 (290)
+|+.-...+ |.+ .++.-..-+++-+|+++.+
T Consensus 572 aL~~f~~~~----~~~r~~~i~~~i~rAv~~L~~~Q 603 (759)
T PLN03012 572 ALILFKQLY----PDHRTEEINAFIKKAAEYIENIQ 603 (759)
T ss_pred HHHHHhhhC----cccchhhhHHHHHHHHHHHHHhc
Confidence 887644443 333 2333344456667777654
No 27
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=65.10 E-value=5.5 Score=31.26 Aligned_cols=27 Identities=26% Similarity=0.132 Sum_probs=15.2
Q ss_pred CccchhhHHHHHHHHH-HHHHHhhccCch
Q 022932 1 MAMRRGVSLRCCCLFL-FLLLIENAHGNP 28 (290)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 28 (290)
|+ +++.+|..|++.+ |++++.|++.+.
T Consensus 1 Ma-SK~~llL~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLISSEVAAREL 28 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 66 5555555554444 456666665544
No 28
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=63.27 E-value=12 Score=37.80 Aligned_cols=48 Identities=25% Similarity=0.250 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHc-----------CC---CCCCCcccccchhHHHHHHhh
Q 022932 240 ELLWGAAWLFRATNDVTYYNFIKSV-----------GD---DGGTDVFSWDNKFAGAHVLLA 287 (290)
Q Consensus 240 e~~wAA~eLy~aTgd~~Yl~~a~~~-----------~~---~~~~~~~~Wd~~~~~~~~lla 287 (290)
-++.|.+|||++|++..|++.|... |. +.......-|+..+.+.+-|.
T Consensus 441 ~~L~allEL~~atq~~~~l~lA~~~g~~l~~~~~~~GlF~~~~~h~y~r~Dd~~PlALL~L~ 502 (557)
T PF06917_consen 441 YLLFALLELYQATQDARYLELADQVGENLFEQHFHRGLFVASPRHRYARLDDPEPLALLALI 502 (557)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHEETTEE-SSTTBSSEETT-SHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHccCceecCChhhceeccCChhhHHHHHHH
Confidence 3789999999999999999998762 11 122223468899888887664
No 29
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein. This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs.
Probab=63.25 E-value=1.1e+02 Score=28.86 Aligned_cols=114 Identities=21% Similarity=0.253 Sum_probs=66.3
Q ss_pred cHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccc
Q 022932 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (290)
Q Consensus 111 ~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~ 190 (290)
+-+.++++++=.++|+.+.+.+ .|.+....+ +.. ..+.+.-+. |+ ..++-++..++.++
T Consensus 182 ~~~~~~~~i~~~i~~~~~~~~~-~g~w~~~~~------------~~~-~~~~~~wCh----G~---~Gi~~~l~~~~~~~ 240 (343)
T cd04794 182 LKPSLAPLIKRSLDYLLSLQFP-SGNFPSSLG------------NRK-RDRLVQWCH----GA---PGIVYLLAKAYLVF 240 (343)
T ss_pred CCccHHHHHHHHHHHHHHhhcc-CCCCCCccC------------CCC-CCccccccC----CC---chHHHHHHHHHHHh
Confidence 3467888889999999888665 443221111 100 112111111 22 23456677778887
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHH--ccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 191 RKGDPRYASLLLRTAKNVLQFAMQ--YRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 191 ~~~D~~yA~~~L~~A~~~~~~a~~--~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
. |+.+-+.+...++..|....- +|+.. +|.- + ..++=..||+.|++++|++.+..
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~g~~~~~~~lC--------HG~~----G----~~~~lL~~~~~~~~~~~~~~a~~ 297 (343)
T cd04794 241 K--EEQYLEAAIKCGELIWKRGLLKKGPGLC--------HGIA----G----NAYAFLLLYRLTGDLKYLYRACK 297 (343)
T ss_pred C--CHHHHHHHHHHHHHHHHhCCccCCCccc--------cCcc----c----hHHHHHHHHHHhCcHHHHHHHHH
Confidence 5 667777777777766643221 12222 2211 1 26777889999999999998876
No 30
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=58.68 E-value=23 Score=33.29 Aligned_cols=82 Identities=22% Similarity=0.170 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcc-----CCCCCCCCCCcCcccCCCCCcchH-HHHHHH
Q 022932 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR-----GAYSDSLGSAVCPFYCSYSGYKDE-LLWGAA 246 (290)
Q Consensus 173 t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~-----~~y~~~~~~~~~~~Y~s~~~~~De-~~wAA~ 246 (290)
+-..+...=++|.+++ +. +|. +++.|++.++|+.++= |.+.....+ .++.=.....|.+- .+.|.+
T Consensus 20 ~~~q~R~~~~fa~a~~-~g--~~~----~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~-~~~~~~~~~~Y~~af~l~ala 91 (346)
T PF07221_consen 20 LWVQARQLYTFARAYR-LG--RPE----YLELAEHGFDFLRKHFRDPEYGGWYRSLDD-GGPLDPQKDLYDQAFALLALA 91 (346)
T ss_dssp HHHHHHHHHHHHHHHH-TT--SHH----HHHHHHHHHHHHHHTTBTTTTSSBSSEEET-TEEEE--EEHHHHHHHHHHHH
T ss_pred eeeeHHHHHHHHHHHh-cC--chh----HHHHHHHHHHHHHHhcccCCCCCEEEEeCC-CCCCccccchHHHHHHHHHHH
Confidence 3456888899999999 54 554 7788999999999861 222211111 01100010112222 456667
Q ss_pred HHHHHcCChhHHHHHHH
Q 022932 247 WLFRATNDVTYYNFIKS 263 (290)
Q Consensus 247 eLy~aTgd~~Yl~~a~~ 263 (290)
+ +++||++.|++.|++
T Consensus 92 ~-~~~tg~~~~~~~A~~ 107 (346)
T PF07221_consen 92 E-ARATGDPEALELAEQ 107 (346)
T ss_dssp H-HHCTT-TTHHHHHHH
T ss_pred H-HHHhCChhHHHHHHH
Confidence 7 899999999999876
No 31
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=56.04 E-value=81 Score=28.93 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 240 ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 240 e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
-.+|+-+.||++|+++.|++.+++
T Consensus 143 Gi~~~L~~l~~~t~d~~~l~~A~~ 166 (321)
T cd04791 143 GIALFLLRLYKATGDSRYLELAEE 166 (321)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH
Confidence 468999999999999999998876
No 32
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
Probab=54.42 E-value=1.9e+02 Score=27.24 Aligned_cols=153 Identities=16% Similarity=0.201 Sum_probs=83.3
Q ss_pred hccCchhHHHHHHHHHhhhHHhcC--CCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccc--hhHHHHHHH
Q 022932 23 NAHGNPNYREALAKSLLFFQGQRS--GRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFP--MAFTTTMLS 98 (290)
Q Consensus 23 ~~~~~~~Y~~~l~~sl~fy~~QRs--G~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~--~a~s~~~L~ 98 (290)
.+-++..|.+++.+++.|.-.... |--|.- ..+.||||+ +.|++ ...-+..|+
T Consensus 58 ~~t~d~~y~~A~~rgld~LL~aQypnGGWPQf------------------~p~~~~Y~~-----~ITfND~am~~vl~lL 114 (290)
T TIGR02474 58 QQEKNAKYRDAARKGIEYLLKAQYPNGGWPQF------------------YPLKGGYSD-----AITYNDNAMVNVLTLL 114 (290)
T ss_pred HhcCchhHHHHHHHHHHHHHhhhCCCCCcCcc------------------cCCcCCccc-----ccccCcHHHHHHHHHH
Confidence 356788999999999988644332 222211 112234443 22222 122333444
Q ss_pred HHHHHccccc----CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchh
Q 022932 99 WSTLEYGKKM----GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSD 174 (290)
Q Consensus 99 w~~~e~~~~~----~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~ 174 (290)
.-+.+..+.| ....+.+..-+.=|+|||||+|.. .|+.+. .|+-=.+..+-+|+..-+.+.| |-
T Consensus 115 ~~i~~~~~~~~~~~~~~~~r~~~Ai~Rgid~ILktQ~~-~gg~~t----------~Wg~Qyd~~tl~Pa~AR~yE~p-Sl 182 (290)
T TIGR02474 115 DDIANGKDPFDVFPDSTRTRAKTAVTKGIECILKTQVV-QNGKLT----------VWCQQHDALTLQPKKARAYELP-SL 182 (290)
T ss_pred HHHHhccCCcccccHHHHHHHHHHHHHHHHHHHHhhcc-cCCcCC----------chhhccCccccccccccccCCc-cc
Confidence 4444555544 334688999999999999999988 554222 2332111111222222222322 33
Q ss_pred HHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 175 VAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 175 ~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
.+.+++..+..-=.+.+ | ..+.+++-+.+-+|.+++
T Consensus 183 s~~ES~~iv~~LM~~~~---p--s~~i~~ai~~A~~W~~~~ 218 (290)
T TIGR02474 183 SSSESVGILLFLMTQPN---P--SAEIKEAIRAGVAWFDTS 218 (290)
T ss_pred ccccHHHHHHHHhcCCC---C--CHHHHHHHHHHHHHHHHC
Confidence 34566666554333332 2 248888888899999987
No 33
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=53.81 E-value=1.1e+02 Score=29.67 Aligned_cols=115 Identities=22% Similarity=0.176 Sum_probs=70.8
Q ss_pred cccceecCCCCcc----cccc----------hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCcee
Q 022932 73 LTGGYYDAGDNVK----FNFP----------MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLY 138 (290)
Q Consensus 73 l~GGWyDAGD~~K----y~~~----------~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y 138 (290)
.||=||-+=|+.| -... .++.+..|.-..+..|+..+ ....+++-++=-++=|+|+|++ +|. +
T Consensus 175 ~TGL~YH~wd~~~~~~w~~~~sG~~~fWaRg~gW~~mal~d~le~lp~~~~-~r~~l~~~l~d~v~al~r~Qde-~Gl-W 251 (357)
T COG4225 175 ETGLYYHGWDEDGTMPWANNESGEPAFWARGNGWYAMALADLLELLPEDHP-DRRELLNVLRDLVDALIRYQDE-SGL-W 251 (357)
T ss_pred CcCceEEeeccCCCCccccccCCCceeeecccchHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHHhhcc-ccc-h
Confidence 5777887778777 2221 23344445555555555433 5566777777778889999997 664 5
Q ss_pred EeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 139 VGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 139 ~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
+||=|. ++|. .| +-|.+++.+|.+++.+-+. .-.+++++ .+|+++|+-+..+
T Consensus 252 ~tiLDd-------~~~~-------sy------~EsSaSa~faYallkgi~~-G~l~~~~~----~~~~kA~~aLl~~ 303 (357)
T COG4225 252 HTILDD-------GRPG-------SY------LESSASAGFAYALLKGINL-GILDPEYA----PVAEKALDALLGH 303 (357)
T ss_pred hhhhcc-------CCCC-------Cc------hhhhHHHHHHHHHHHHHhc-CCCCchhh----HHHHHHHHHHHhh
Confidence 554331 1121 12 3355678888888876543 11355665 7889999988877
No 34
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=53.72 E-value=90 Score=28.61 Aligned_cols=112 Identities=18% Similarity=0.083 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccccc
Q 022932 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR 191 (290)
Q Consensus 112 ~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~ 191 (290)
-+.+++.++=.++++++.....++..+. + + +....++.+ + -|+ +.++-++...+.+.
T Consensus 157 d~~~l~~A~~~~~~~~~~~~~~~~g~~~-~-----------~--~~~~~~~~w-c----hG~---aGi~~~l~~l~~~~- 213 (321)
T cd04791 157 DSRYLELAEEALDKELARAVVDDGGLLQ-V-----------D--EGARLLPYL-C----SGS---AGLGLLMLRLEAIT- 213 (321)
T ss_pred CHHHHHHHHHHHHHHHHhhccCCCCceE-c-----------C--CCCccCccc-C----CCc---HHHHHHHHHHHHhc-
Confidence 3668888888888887765431222221 1 1 011112222 1 122 33445555556664
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 192 KGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 192 ~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
.|+.|.+...+..+........+|+..+ |. .+ .+++-..+++.|+++.|++.+.+
T Consensus 214 -~d~~~~~~a~~~~~~~~~~~~~~~~lch--------G~----~G----~~~~l~~~~~~~~~~~~~~~~~~ 268 (321)
T cd04791 214 -GDKRWRDEADGIAHAALSSCYANPGLFS--------GT----AG----LGAHLNDLAAEGDNALYKAAAER 268 (321)
T ss_pred -CCHHHHHHHHHHHHHHhhhhccCccccC--------Cc----Hh----HHHHHHhhcccccChHHHHHHHH
Confidence 3666554444444444333333333322 21 11 27788899999999999998877
No 35
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=52.89 E-value=23 Score=27.03 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhcccCCCCceeE
Q 022932 116 RAAIRWATDYLLKCATATPGKLYV 139 (290)
Q Consensus 116 Lde~kwg~D~llk~~~~~~g~~y~ 139 (290)
.++++ +++||.++|.+ +|++..
T Consensus 42 ~~~~~-~~~~L~~~q~~-dGg~~~ 63 (113)
T PF13249_consen 42 RDRAA-AVEWLLSQQNP-DGGWGS 63 (113)
T ss_dssp HHHHH-HHHHHHHHB-T-TSGBBS
T ss_pred HHHHH-HHHHHHHhCCC-CCCccC
Confidence 55555 99999999998 886544
No 36
>KOG4056 consensus Translocase of outer mitochondrial membrane complex, subunit TOM20 [Intracellular trafficking, secretion, and vesicular transport]
Probab=52.67 E-value=22 Score=29.93 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHhccccc----CCCHHHHHHHHHHHHHHHH
Q 022932 173 SDVAGETAAALAAASLVFR----KGDPRYASLLLRTAKNVLQ 210 (290)
Q Consensus 173 t~~~~~~AAalA~as~v~~----~~D~~yA~~~L~~A~~~~~ 210 (290)
+-+++.+++++++++-+|- ..||.|.+++.+..++-=.
T Consensus 11 ~vI~agiag~af~gYciYFd~KRrsdP~fk~~lr~rrk~q~~ 52 (143)
T KOG4056|consen 11 SVIAAGIAGLAFIGYCIYFDKKRRSDPDFKKKLRERRKKQAS 52 (143)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHhh
Confidence 4677888888999999984 3699999999999887543
No 37
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=45.69 E-value=2.5e+02 Score=26.00 Aligned_cols=158 Identities=17% Similarity=0.169 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCccccccccee--cCCCCcccccchhHHHHHHHHHHHHcc
Q 022932 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYY--DAGDNVKFNFPMAFTTTMLSWSTLEYG 105 (290)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWy--DAGD~~Ky~~~~a~s~~~L~w~~~e~~ 105 (290)
..|.+.+.+++.|...++--..+.. |... ..-.-.|||= +.+..-..+..+++++..|+ .+.++.
T Consensus 42 ~~~~~~~~ka~~~l~~~q~~~~~~~----~~~~--------~~~~~~Ggw~y~~~~~~~~~~~~Ta~~l~al~-~~~~~~ 108 (348)
T cd02889 42 PEFDPALKKALEWLLKSQIRDNPDD----WKVK--------YRHLRKGGWAFSTANQGYPDSDDTAEALKALL-RLQKKP 108 (348)
T ss_pred CccCHHHHHHHHHHHhcCCCCCCCc----hhhc--------CCCCCCCcCcccCcCCCCCCCCChHHHHHHHH-HhhccC
Confidence 4788999999999876542112211 1100 0111234442 11110011235566665553 222221
Q ss_pred cccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCC-C-CCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932 106 KKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCW-E-RPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (290)
Q Consensus 106 ~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w-~-~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal 183 (290)
..+.+...+.++=+++||+++|.+ +|++..--.. . +..| + .|+.. .... . ..|..+.++.+..+|
T Consensus 109 ---~~~~~~~~~~i~~a~~~L~~~Q~~-dG~f~~~~~~--~-~~~~~~~~~~~~-~~~~---~--~~~~~~~Ta~~l~aL 175 (348)
T cd02889 109 ---PDGKKVSRERLYDAVDWLLSMQNS-NGGFAAFEPD--N-TYKYLELIPEVD-GDIM---I--DPPYVECTGSVLEAL 175 (348)
T ss_pred ---cccchhhHHHHHHHHHHHHHhccC-CCCEeeecCC--c-cHHHHhcCchhh-cCCc---c--CCCCcchHHHHHHHH
Confidence 224455678888899999999998 8886421110 0 0111 0 11111 1110 1 112335567777777
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
..+.+.... ..+++.+..+++-+|+.+.
T Consensus 176 ~~~~~~~~~----~~~~~~~~i~~a~~~L~~~ 203 (348)
T cd02889 176 GLFGKLYPE----HRREIDPAIRRAVKYLERE 203 (348)
T ss_pred HHhhhcCCc----hHHHHHHHHHHHHHHHHHh
Confidence 766654332 2235666777888888765
No 38
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=44.17 E-value=2.1e+02 Score=26.56 Aligned_cols=24 Identities=33% Similarity=0.477 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcee
Q 022932 114 NARAAIRWATDYLLKCATATPGKLY 138 (290)
Q Consensus 114 dlLde~kwg~D~llk~~~~~~g~~y 138 (290)
.+.+.++=+++||+++|.+ +|.++
T Consensus 188 ~~~~~i~~a~~~L~~~q~~-dG~w~ 211 (348)
T cd02889 188 EIDPAIRRAVKYLEREQEP-DGSWY 211 (348)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCCcc
Confidence 4666778899999999998 78654
No 39
>PLN02993 lupeol synthase
Probab=42.01 E-value=4.7e+02 Score=28.13 Aligned_cols=164 Identities=12% Similarity=0.119 Sum_probs=78.9
Q ss_pred hHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHH-HHHHHHHHccc
Q 022932 29 NYREALAKSLLFFQGQRSGR-LPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTT-MLSWSTLEYGK 106 (290)
Q Consensus 29 ~Y~~~l~~sl~fy~~QRsG~-lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~-~L~w~~~e~~~ 106 (290)
.+...+.++..|...+..-. .|++-.+..|+. .-|.=.--+...||=|.=| +|.++- .|+ ....+.
T Consensus 436 ~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~~---~~GgW~Fs~~~~gyp~sDd-------TAe~lka~l~--l~~~~~ 503 (763)
T PLN02993 436 ETDDVLRRGHNYIKKSQVRENPSGDFKSMYRHI---SKGAWTLSDRDHGWQVSDC-------TAEALKCCML--LSMMPA 503 (763)
T ss_pred ccCHHHHHHHHHHHHHhccCCCCCchHhhCCCC---CCCcCcCccCCCCCCcCCc-------hHHHHHHHHH--HhhCcc
Confidence 67899999999998776653 333322222221 1111000122344444444 222321 111 122221
Q ss_pred cc-CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHH
Q 022932 107 KM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAA 185 (290)
Q Consensus 107 ~~-~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~ 185 (290)
.. +..++ -+-++=++||||.||.. +|++-.=--+.+..-..+.+|.+.-.. + -| +.|..+.|+.+.-+|+.
T Consensus 504 ~~~~~~~~--~~~l~~av~wlL~mQn~-dGG~aafe~~~~~~~le~ln~ae~f~~--~-mi--D~~~~dcT~~vl~aL~~ 575 (763)
T PLN02993 504 DVVGQKID--PEQLYDSVNLLLSLQSE-NGGVTAWEPVRAYKWLELLNPTDFFAN--T-MV--EREYVECTSAVIQALVL 575 (763)
T ss_pred ccccccch--HHHHHHHHHHHHhhccC-CCCEEeeeCCCchhHHHcCCHHHhhcC--c-cc--CCCCcCHHHHHHHHHHH
Confidence 11 22222 26778899999999998 887533222211111123345442100 1 12 23456778887777775
Q ss_pred hcccccCCCHHH-HHHHHHHHHHHHHHHHHcc
Q 022932 186 ASLVFRKGDPRY-ASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 186 as~v~~~~D~~y-A~~~L~~A~~~~~~a~~~~ 216 (290)
-...+ |.+ .++.-+.-+++-+|+.+.+
T Consensus 576 ~~~~~----p~~r~~ei~~~i~rAv~yL~~~Q 603 (763)
T PLN02993 576 FKQLY----PDHRTKEIIKSIEKAVQFIESKQ 603 (763)
T ss_pred hcccC----cchhhhhHHHHHHHHHHHHHHhc
Confidence 43322 333 2333344566667777654
No 40
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=40.06 E-value=4.6e+02 Score=27.42 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhcccCCCCce
Q 022932 114 NARAAIRWATDYLLKCATATPGKL 137 (290)
Q Consensus 114 dlLde~kwg~D~llk~~~~~~g~~ 137 (290)
..-+.++=++|||++||.. +|++
T Consensus 400 ~~~~~i~ra~~wLl~~Qn~-dGgw 422 (635)
T TIGR01507 400 RRRDAMTKAFRWIAGMQSS-NGGW 422 (635)
T ss_pred cchHHHHHHHHHHHHhcCC-CCCE
Confidence 3457889999999999998 8876
No 41
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4.2.2.2 from EC), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.; PDB: 1R76_A 1GXM_B 1GXN_A 1GXO_A.
Probab=38.19 E-value=2e+02 Score=27.13 Aligned_cols=157 Identities=23% Similarity=0.331 Sum_probs=75.4
Q ss_pred HhhccCchhHHHHHHHHHhhh-HHhcC-CCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHH
Q 022932 21 IENAHGNPNYREALAKSLLFF-QGQRS-GRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLS 98 (290)
Q Consensus 21 ~~~~~~~~~Y~~~l~~sl~fy-~~QRs-G~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~ 98 (290)
+-..-++..|..++.+.|.|. .+|-. |--|- ...+.|||||. +=|.=....-+..|+
T Consensus 51 ~y~~t~d~~y~~A~~kgl~ylL~aQypnGGWPQ------------------~yP~~~~Y~~~---ITfNDdam~~vl~lL 109 (289)
T PF09492_consen 51 VYQATKDPRYREAFLKGLDYLLKAQYPNGGWPQ------------------FYPLRGGYHDH---ITFNDDAMVNVLELL 109 (289)
T ss_dssp HHHHCG-HHHHHHHHHHHHHHHHHS-TTS--BS------------------ECS--SGGGGS---EE-GGGHHHHHHHHH
T ss_pred HHHHhCChHHHHHHHHHHHHHHHhhCCCCCCCc------------------cCCCCCCCCCc---eEEccHHHHHHHHHH
Confidence 333558889999999999875 44543 21221 22346666642 333323233333333
Q ss_pred HHHHHccccc----CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchh
Q 022932 99 WSTLEYGKKM----GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSD 174 (290)
Q Consensus 99 w~~~e~~~~~----~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~ 174 (290)
--..+-...| ......+.+-+.=|+|+|||+|...+|. . ..|+.=.+...-.|+..-+.+.|+ -
T Consensus 110 ~~v~~~~~~~~~v~~~~~~r~~~A~~kgi~ciL~tQi~~~g~----~-------t~W~qQhD~~Tl~Pa~AR~yE~pS-l 177 (289)
T PF09492_consen 110 RDVAEGKGDFAFVDESLRARARAAVDKGIDCILKTQIRQNGK----L-------TAWCQQHDEVTLQPAWARAYEPPS-L 177 (289)
T ss_dssp HHHHCT-TTSTTS-HHHHHHHHHHHHHHHHHHHHHS-EETTE----E-----------SEE-TTT-SB---STT--SS-E
T ss_pred HHHHhhcCCccccCHHHHHHHHHHHHHHHHHHHHHHcccCCC----C-------CchhhccCcccccccccccCCCcc-c
Confidence 3333333333 3345679999999999999999852342 1 123331111111222222233232 1
Q ss_pred HHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 175 VAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 175 ~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
.+.+.+..+-.-=.+ .+|+ .+.+++-+.+-+|.+++
T Consensus 178 s~~ES~~iv~~LM~~---~~ps--~~v~~aI~~AvaWl~~~ 213 (289)
T PF09492_consen 178 SGSESVGIVRFLMSL---PNPS--PEVLAAIEAAVAWLESV 213 (289)
T ss_dssp ECCCHHHHHHHHCTS---SS----HHHHHHHHHHHHHHCCT
T ss_pred ccccHHHHHHHHhcC---CCCC--HHHHHHHHHHHHHHHhC
Confidence 223444444432222 3444 88999999999999876
No 42
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=31.98 E-value=1.6e+02 Score=29.66 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCC-----CCcCcccCCC--CCc-----chHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 199 SLLLRTAKNVLQFAMQYRGAYSDSLG-----SAVCPFYCSY--SGY-----KDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 199 ~~~L~~A~~~~~~a~~~~~~y~~~~~-----~~~~~~Y~s~--~~~-----~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
++++++++.+|+...++...-.-.++ +.-++.|... ..+ .=+++.-+-.|++.|||.+|.+.+++
T Consensus 253 ~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~~~~~~EtCas~~~~~~~~~L~~~tgd~~yaD~~Er 329 (520)
T PF07944_consen 253 EEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPNRLAYAETCASVNMMKLARRLFRLTGDARYADYYER 329 (520)
T ss_pred HHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCcCCCCccccHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 57889999999999876432111111 1011112110 000 12577778889999999999999998
No 43
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.87 E-value=59 Score=30.15 Aligned_cols=34 Identities=24% Similarity=0.227 Sum_probs=28.6
Q ss_pred HHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Q 022932 179 TAAALAAASLVFRKGDPRYASLLLRTAKNVLQFA 212 (290)
Q Consensus 179 ~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a 212 (290)
+|-+.+-|+.-||..||+=|.+||++|+++|.--
T Consensus 73 aat~YveA~~cykk~~~~eAv~cL~~aieIyt~~ 106 (288)
T KOG1586|consen 73 AATTYVEAANCYKKVDPEEAVNCLEKAIEIYTDM 106 (288)
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHhh
Confidence 3455667788899999999999999999999744
No 44
>PF11131 PhrC_PhrF: Rap-phr extracellular signalling
Probab=31.75 E-value=55 Score=21.14 Aligned_cols=24 Identities=13% Similarity=0.097 Sum_probs=19.4
Q ss_pred chhhHHHHHHHHHHHHHHhhccCc
Q 022932 4 RRGVSLRCCCLFLFLLLIENAHGN 27 (290)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~ 27 (290)
..|+++.||++-..|.+.+++..+
T Consensus 2 KsKl~l~CLA~aavF~~a~va~a~ 25 (37)
T PF11131_consen 2 KSKLFLICLAAAAVFTAAGVANAP 25 (37)
T ss_pred chhHHHHHHHHHHHHHhhcccCCc
Confidence 468899999998889888886554
No 45
>PF07116 DUF1372: Protein of unknown function (DUF1372); InterPro: IPR010779 This entry is represented by Streptococcus phage Sfi11, Gp93. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.
Probab=29.65 E-value=22 Score=28.26 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=23.4
Q ss_pred cccccccee--cCCCCcccccchhHHHHHHHHHHHHccccc--CccHHHHH
Q 022932 70 HVDLTGGYY--DAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GPELQNAR 116 (290)
Q Consensus 70 ~~Dl~GGWy--DAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~--~~~~~dlL 116 (290)
.....||=| ++|+||||+++- |--+.. ++.+|+.|
T Consensus 64 ~K~~ig~~yTvti~~YGkFlVtk------------eqY~~i~iGDdiP~yL 102 (104)
T PF07116_consen 64 EKEIIGGLYTVTIGAYGKFLVTK------------EQYESIKIGDDIPDYL 102 (104)
T ss_pred eceeECCEEEEEecCceEEEEeh------------hhcceeecCCcchhhh
Confidence 345778877 569999999861 211222 78888766
No 46
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only]
Probab=29.27 E-value=2e+02 Score=29.87 Aligned_cols=85 Identities=21% Similarity=0.304 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc----------cCC-CCCCCCCCcCcccCCC-CCcchH--
Q 022932 175 VAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY----------RGA-YSDSLGSAVCPFYCSY-SGYKDE-- 240 (290)
Q Consensus 175 ~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~----------~~~-y~~~~~~~~~~~Y~s~-~~~~De-- 240 (290)
-.|.+...+|.++.+++. +| ++++.|+..-+|..++ ++. |....+......-+++ ..+.||
T Consensus 506 WnGLviSgl~kag~~~~a-~~----~y~~~a~~~a~fl~k~m~d~~eklliR~scY~ga~g~ve~~n~~~~~~~FldDYA 580 (786)
T KOG2244|consen 506 WNGLVISGLAKAGKILKA-EP----EYTKYAFPVANFLPKDMIDVAEKLLIRGSCYDGASGRVEHSNRPSKAPAFLDDYA 580 (786)
T ss_pred ccchhhHHHHHHHHHhhc-CH----HHHHHHHHHHhhhhhhhhchhhhheeecccccCCCcceeccCCccccchhhhhHH
Confidence 347788889999999874 44 4455555555554432 322 4322221111111221 136666
Q ss_pred -HHHHHHHHHHHcCChhHHHHHHHc
Q 022932 241 -LLWGAAWLFRATNDVTYYNFIKSV 264 (290)
Q Consensus 241 -~~wAA~eLy~aTgd~~Yl~~a~~~ 264 (290)
++=+-+.||.++|+..||+.|.+.
T Consensus 581 FlI~gLLDlYea~~~~e~LkwA~~L 605 (786)
T KOG2244|consen 581 FLISGLLDLYEAGGGIEWLKWAIKL 605 (786)
T ss_pred HHHHHHHHHHHccCchHHHHHHHHH
Confidence 556779999999999999999873
No 47
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=29.21 E-value=4.5e+02 Score=27.31 Aligned_cols=24 Identities=38% Similarity=0.572 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcee
Q 022932 114 NARAAIRWATDYLLKCATATPGKLY 138 (290)
Q Consensus 114 dlLde~kwg~D~llk~~~~~~g~~y 138 (290)
+|.+.++=+++||++.|.+ +|..|
T Consensus 473 ~i~~~i~rAv~~L~~~Q~~-DGsW~ 496 (634)
T cd02892 473 EIDPAIRRAVKYLLREQEP-DGSWY 496 (634)
T ss_pred HHHHHHHHHHHHHHHccCC-CCCcc
Confidence 5667888899999999998 88754
No 48
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4.2.2.2 from EC), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.; PDB: 1R76_A 1GXM_B 1GXN_A 1GXO_A.
Probab=27.34 E-value=5.3e+02 Score=24.30 Aligned_cols=86 Identities=14% Similarity=0.036 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccc
Q 022932 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (290)
Q Consensus 111 ~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~ 190 (290)
+-+..++-+.=|+||||++|.+ +|+. -|+- |......+.+ +.+ =++..++.-.|=.++...
T Consensus 56 ~d~~y~~A~~kgl~ylL~aQyp-nGGW-PQ~y-----------P~~~~Y~~~I---TfN---Ddam~~vl~lL~~v~~~~ 116 (289)
T PF09492_consen 56 KDPRYREAFLKGLDYLLKAQYP-NGGW-PQFY-----------PLRGGYHDHI---TFN---DDAMVNVLELLRDVAEGK 116 (289)
T ss_dssp G-HHHHHHHHHHHHHHHHHS-T-TS---BSEC-----------S--SGGGGSE---E-G---GGHHHHHHHHHHHHHCT-
T ss_pred CChHHHHHHHHHHHHHHHhhCC-CCCC-CccC-----------CCCCCCCCce---EEc---cHHHHHHHHHHHHHHhhc
Confidence 4568999999999999999998 7752 1111 2222222222 222 145555555555555544
Q ss_pred cC---CCHHHHHHHHHHHHHHHHHHHHc
Q 022932 191 RK---GDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 191 ~~---~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
.+ .|+++.+++.++.+++-++..+.
T Consensus 117 ~~~~~v~~~~~~r~~~A~~kgi~ciL~t 144 (289)
T PF09492_consen 117 GDFAFVDESLRARARAAVDKGIDCILKT 144 (289)
T ss_dssp TTSTTS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 33 47888888888888888888764
No 49
>PF03230 Antirestrict: Antirestriction protein; InterPro: IPR004914 This family includes various protein that are involved in antirestriction. The ArdB protein efficiently inhibits restriction by members of the three known families of type I systems of Escherichia coli [].; PDB: 2WJ9_B 2KMG_A.
Probab=27.20 E-value=54 Score=25.68 Aligned_cols=42 Identities=21% Similarity=0.266 Sum_probs=29.2
Q ss_pred chhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccC
Q 022932 172 GSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRG 217 (290)
Q Consensus 172 ~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~ 217 (290)
+.+++|.++-.++...+.++.....++ ++=.+|.+|+..||.
T Consensus 44 SadAaGIi~tL~~ls~la~~~~~~~~~----~~y~~Lr~ya~~HpE 85 (94)
T PF03230_consen 44 SADAAGIIATLFALSHLAWETECDHLA----ERYHQLRDYALQHPE 85 (94)
T ss_dssp -HHHHHHHHHHHHHHHHHHHC-TCCCH----HHHHHHHHHHHCSTT
T ss_pred ccchHHHHHHHHHHHHHHhhcCCHHHH----HHHHHHHHHHHhChh
Confidence 457888888778887777765443444 444789999999985
No 50
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=26.59 E-value=3.4e+02 Score=26.05 Aligned_cols=41 Identities=15% Similarity=-0.039 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHH
Q 022932 174 DVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQ 214 (290)
Q Consensus 174 ~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~ 214 (290)
++.|..-.||-.++.+.+....+.++++.+.|+++=+--++
T Consensus 167 EIqal~y~AL~~~~~la~~~~~~~a~~~~~~A~~lk~~F~~ 207 (370)
T PF06202_consen 167 EIQALWYNALRFAAELAEKFGDELAARYREWAERLKESFEK 207 (370)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Confidence 45566666677666666533323777787777777665544
No 51
>PF13243 Prenyltrans_1: Prenyltransferase-like; PDB: 3SDR_A 3SAE_A 3SDV_A 3SDT_A 3SDQ_A 3SDU_A.
Probab=26.45 E-value=15 Score=28.15 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHhcccCCCCc
Q 022932 114 NARAAIRWATDYLLKCATATPGK 136 (290)
Q Consensus 114 dlLde~kwg~D~llk~~~~~~g~ 136 (290)
...+-|+=+++||+++|.+ ||+
T Consensus 43 ~~~~ai~ka~~~l~~~Q~~-dG~ 64 (109)
T PF13243_consen 43 AVDEAIKKAIDWLLSHQNP-DGG 64 (109)
T ss_dssp -SSBSSHHHHHHHHH---T-TS-
T ss_pred CcHHHHHHHHHHHHHhcCC-CCC
Confidence 4555667789999999988 775
No 52
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
Probab=23.66 E-value=6.3e+02 Score=23.86 Aligned_cols=85 Identities=13% Similarity=0.068 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcc---
Q 022932 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASL--- 188 (290)
Q Consensus 112 ~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~--- 188 (290)
-+...+-+.=|+||||+||.+ +|+. -|+- |......+ .|+.+. ++...+.=.|...+.
T Consensus 62 d~~y~~A~~rgld~LL~aQyp-nGGW-PQf~-----------p~~~~Y~~---~ITfND---~am~~vl~lL~~i~~~~~ 122 (290)
T TIGR02474 62 NAKYRDAARKGIEYLLKAQYP-NGGW-PQFY-----------PLKGGYSD---AITYND---NAMVNVLTLLDDIANGKD 122 (290)
T ss_pred chhHHHHHHHHHHHHHhhhCC-CCCc-Cccc-----------CCcCCccc---ccccCc---HHHHHHHHHHHHHHhccC
Confidence 467889999999999999998 7751 1111 11111111 122222 334444445543332
Q ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 189 VFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 189 v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
-|...+.+..++...+.+++=+|..+.
T Consensus 123 ~~~~~~~~~~~r~~~Ai~Rgid~ILkt 149 (290)
T TIGR02474 123 PFDVFPDSTRTRAKTAVTKGIECILKT 149 (290)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHh
Confidence 233345566677777777777777665
No 53
>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit.
Probab=23.62 E-value=1.2e+02 Score=25.80 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhccccc----CCCHHHHHHHHHHHH
Q 022932 174 DVAGETAAALAAASLVFR----KGDPRYASLLLRTAK 206 (290)
Q Consensus 174 ~~~~~~AAalA~as~v~~----~~D~~yA~~~L~~A~ 206 (290)
.+++.+++++-+++-||= ..||+|-+++.+.-+
T Consensus 10 ~~~ag~a~~~flgYciYFD~KRR~dPdFRkkLr~rr~ 46 (148)
T TIGR00985 10 VIAAGIAAAAFLGYAIYFDYKRRNDPDFRKKLRRRRK 46 (148)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHH
Confidence 345666777888888884 469999988877554
No 54
>PRK13838 conjugal transfer pilin processing protease TraF; Provisional
Probab=23.33 E-value=67 Score=27.84 Aligned_cols=20 Identities=20% Similarity=-0.036 Sum_probs=15.5
Q ss_pred cchhhHHHHHHHHHHHHHHh
Q 022932 3 MRRGVSLRCCCLFLFLLLIE 22 (290)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (290)
||||+++..+.++++++...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (176)
T PRK13838 1 MRRRRALLLLAVAAVAASGL 20 (176)
T ss_pred CCcchHHHHHHHHHHHHHHH
Confidence 79999998888777766543
No 55
>KOG2430 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism]
Probab=22.87 E-value=99 Score=30.09 Aligned_cols=60 Identities=15% Similarity=0.248 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHc---cCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 199 SLLLRTAKNVLQFAMQY---RGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 199 ~~~L~~A~~~~~~a~~~---~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
+..++--+.+|+-.++| |..+.... .-.+.. ....-|++=..--||+||||+.|++.++.
T Consensus 324 k~aie~heml~qvikkh~flpeaft~df----~vhwae-hpirpefaestyflykat~dp~yl~v~k~ 386 (587)
T KOG2430|consen 324 KEAIEMHEMLFQVIKKHKFLPEAFTHDF----QVHWAE-HPIRPEFAESTYFLYKATGDPHYLEVAKQ 386 (587)
T ss_pred HHHHHHHHHHHHHHHHcccChHhhcccc----eeeccc-CCCChhhhhhheeeecccCCchHHHHHHH
Confidence 44566678889999988 44443210 011111 23334444455579999999999998876
No 56
>PRK15137 DNA-specific endonuclease I; Provisional
Probab=22.45 E-value=1.4e+02 Score=27.23 Aligned_cols=42 Identities=21% Similarity=0.155 Sum_probs=28.4
Q ss_pred cchhhHHHHHHHHHHHHHHhhccCchhHHHHHHHHHhhhHHh
Q 022932 3 MRRGVSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQ 44 (290)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~Q 44 (290)
|.||.++..+...+++.....+.....++++-+.+.+.|.-+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~sF~~AKk~~~~iy~~~ 42 (235)
T PRK15137 1 MYRNLSIAAVLLSAAFSGPALAEGINNFSQAKAAAVKVHADA 42 (235)
T ss_pred CchhHHHHHHHHHHHhhhhhhhcCccCHHHHHHHHHHHhcCC
Confidence 678877665555555555556777779999888887765433
No 57
>PF10789 Phage_RpbA: Phage RNA polymerase binding, RpbA; InterPro: IPR019725 Upon infection, the RpbA encoded phage protein binds to the ADP-ribosylated core RNA polymerase and modulates function to preferentially bind T4 promoters. This is a non-essential protein to the phage life cycle.
Probab=22.07 E-value=2.1e+02 Score=23.09 Aligned_cols=60 Identities=17% Similarity=0.199 Sum_probs=44.2
Q ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHccCCCCC-CCCCCcCcccCCCCCcchHHHHHHHHHHHH
Q 022932 189 VFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSD-SLGSAVCPFYCSYSGYKDELLWGAAWLFRA 251 (290)
Q Consensus 189 v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~-~~~~~~~~~Y~s~~~~~De~~wAA~eLy~a 251 (290)
+|+.+|..-.+.-.+-.++.++-+.+.-..+.. ...+-..+.||. ..||++..|+++..+
T Consensus 46 lY~~iD~~V~~~wi~Lm~~~r~~sl~~Gak~V~~~g~~rled~yc~---d~De~li~Aa~~v~~ 106 (108)
T PF10789_consen 46 LYKEIDEDVSDKWIELMRKHREDSLAAGAKFVRVNGKERLEDQYCY---DTDELLIQAAQIVAA 106 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCceeccCCceecchhhcc---ChHHHHHHHHHHHHH
Confidence 578889888899999999999988886544332 222224567876 569999999998865
No 58
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol and isomultiflorenol.
Probab=21.08 E-value=1.6e+02 Score=30.63 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhcccCCCCc
Q 022932 117 AAIRWATDYLLKCATATPGK 136 (290)
Q Consensus 117 de~kwg~D~llk~~~~~~g~ 136 (290)
++++=+++||+++|.+ ||+
T Consensus 509 ~~i~rA~~~L~~~Q~~-DGG 527 (621)
T TIGR01787 509 PEVQKACDWLLSRQMP-DGG 527 (621)
T ss_pred HHHHHHHHHHHhhcCC-CCC
Confidence 6677799999999998 775
No 59
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism]
Probab=20.14 E-value=82 Score=32.39 Aligned_cols=25 Identities=32% Similarity=0.481 Sum_probs=21.9
Q ss_pred chHHHHHHHHHHHHcCChhHHHHHH
Q 022932 238 KDELLWGAAWLFRATNDVTYYNFIK 262 (290)
Q Consensus 238 ~De~~wAA~eLy~aTgd~~Yl~~a~ 262 (290)
.-|++=.+-+|||||+|+.||+.-.
T Consensus 373 RPElvEStyyLYrATkdp~yL~vG~ 397 (622)
T KOG2429|consen 373 RPELVESTYYLYRATKDPFYLHVGE 397 (622)
T ss_pred CHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 4689999999999999999998543
No 60
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=20.06 E-value=1.1e+02 Score=21.09 Aligned_cols=21 Identities=10% Similarity=0.134 Sum_probs=11.4
Q ss_pred cchhhHH-HHHHHHHHHHHHhh
Q 022932 3 MRRGVSL-RCCCLFLFLLLIEN 23 (290)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~~ 23 (290)
|+|...+ .++++.++.|+.|+
T Consensus 2 mKk~i~~i~~~l~~~~~l~~Cn 23 (48)
T PRK10081 2 VKKTIAAIFSVLVLSTVLTACN 23 (48)
T ss_pred hHHHHHHHHHHHHHHHHHhhhh
Confidence 4455544 44444455677776
Done!