Query 022932
Match_columns 290
No_of_seqs 152 out of 939
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 13:33:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 9.6E-79 3.3E-83 591.7 20.8 260 27-289 2-267 (433)
2 2xfg_A Endoglucanase 1; hydrol 100.0 7.1E-78 2.4E-82 589.8 24.3 262 24-289 20-294 (466)
3 1ia6_A Cellulase CEL9M; cellul 100.0 3.1E-77 1.1E-81 582.2 24.0 256 26-289 2-270 (441)
4 2yik_A Endoglucanase; hydrolas 100.0 1E-77 3.6E-82 605.5 19.4 263 24-289 34-332 (611)
5 1tf4_A T. fusca endo/EXO-cellu 100.0 5.8E-76 2E-80 592.2 21.5 261 26-289 2-274 (605)
6 1g87_A Endocellulase 9G; endog 100.0 1E-75 3.5E-80 591.0 22.2 259 26-289 2-272 (614)
7 1clc_A Endoglucanase CELD; EC: 100.0 4.2E-68 1.4E-72 538.1 20.3 255 24-287 123-402 (639)
8 3gzk_A Cellulase; fold from GH 100.0 5.2E-66 1.8E-70 513.8 18.3 258 24-288 82-358 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 2.6E-64 8.9E-69 508.3 19.7 258 24-288 95-422 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 2.9E-50 1E-54 401.7 11.7 225 24-277 90-351 (586)
11 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.062 2.1E-06 50.1 19.0 179 15-263 52-240 (349)
12 3gt5_A N-acetylglucosamine 2-e 96.9 0.0033 1.1E-07 59.6 9.3 143 84-263 48-200 (402)
13 2gz6_A N-acetyl-D-glucosamine 96.2 0.03 1E-06 52.0 11.0 146 84-263 49-199 (388)
14 2gz6_A N-acetyl-D-glucosamine 95.9 0.15 5.1E-06 47.2 14.1 112 123-263 21-142 (388)
15 1fp3_A N-acyl-D-glucosamine 2- 95.2 0.15 5.1E-06 47.6 11.3 124 115-263 15-149 (402)
16 3gt5_A N-acetylglucosamine 2-e 94.3 0.077 2.6E-06 50.0 6.9 120 115-263 11-139 (402)
17 2zzr_A Unsaturated glucuronyl 93.1 0.35 1.2E-05 46.0 9.2 127 113-263 133-273 (397)
18 3k11_A Putative glycosyl hydro 92.8 0.86 3E-05 43.9 11.6 135 91-254 269-416 (445)
19 2ahf_A Unsaturated glucuronyl 92.8 0.46 1.6E-05 44.8 9.5 126 113-263 107-248 (377)
20 1fp3_A N-acyl-D-glucosamine 2- 91.5 0.55 1.9E-05 43.7 8.3 85 171-263 246-341 (402)
21 3k7x_A LIN0763 protein; Q92DQ0 89.6 1.2 4.1E-05 41.3 8.7 68 177-263 49-119 (349)
22 2zbl_A Putative isomerase; N-a 89.3 1 3.5E-05 42.4 8.2 143 84-263 47-199 (421)
23 3pmm_A Putative cytoplasmic pr 84.4 7.3 0.00025 36.4 10.9 112 113-263 25-137 (382)
24 3pmm_A Putative cytoplasmic pr 79.9 33 0.0011 31.8 13.6 96 90-215 235-332 (382)
25 1gxm_A Pectate lyase; mechanis 74.8 23 0.00079 32.7 10.6 84 113-216 93-182 (332)
26 2ahf_A Unsaturated glucuronyl 74.7 50 0.0017 30.7 13.2 146 94-263 154-312 (377)
27 3e6u_A LANC-like protein 1; al 74.5 8 0.00027 36.3 7.7 115 111-263 248-362 (411)
28 1w6k_A Lanosterol synthase; cy 72.7 85 0.0029 31.8 18.5 164 28-216 405-571 (732)
29 1nc5_A Hypothetical protein YT 72.3 5.5 0.00019 36.8 5.9 69 177-263 44-114 (373)
30 2zbl_A Putative isomerase; N-a 71.9 8.3 0.00028 36.1 7.1 88 171-263 246-343 (421)
31 1nc5_A Hypothetical protein YT 69.0 6 0.0002 36.6 5.4 57 199-263 106-170 (373)
32 3k11_A Putative glycosyl hydro 67.7 11 0.00037 36.2 7.0 75 177-263 85-172 (445)
33 2v8i_A Pectate lyase; periplas 63.5 8.7 0.0003 37.3 5.3 48 240-287 430-491 (543)
34 1r76_A Pectate lyase; A-helica 63.5 42 0.0014 31.8 10.0 86 112-216 170-258 (408)
35 2zzr_A Unsaturated glucuronyl 59.1 46 0.0016 31.3 9.5 145 90-263 175-337 (397)
36 2kmg_A KLCA; ARDB, spectroscop 45.9 18 0.00063 29.2 3.8 84 124-217 40-133 (142)
37 2g0d_A Nisin biosynthesis prot 42.7 64 0.0022 29.5 7.6 71 177-263 282-352 (409)
38 2p0v_A Hypothetical protein BT 38.5 89 0.003 30.3 7.9 115 91-215 183-319 (489)
39 1gxm_A Pectate lyase; mechanis 36.7 1.6E+02 0.0055 27.0 9.1 97 24-142 89-193 (332)
40 2wj9_A ARDB, intergenic-region 30.2 94 0.0032 26.1 5.8 86 124-217 79-172 (181)
41 1w6k_A Lanosterol synthase; cy 23.1 1.2E+02 0.0041 30.7 6.2 25 113-138 554-578 (732)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=9.6e-79 Score=591.73 Aligned_cols=260 Identities=50% Similarity=0.893 Sum_probs=246.0
Q ss_pred chhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHccc
Q 022932 27 NPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGK 106 (290)
Q Consensus 27 ~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~ 106 (290)
.++|.++|++||+||++||||.+|++++++||++||+.||++.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~ 81 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA 81 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHH
Q 022932 107 KM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA 184 (290)
Q Consensus 107 ~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA 184 (290)
.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++++|++|+|+.++|||++++++|||||
T Consensus 82 ~~~~~~~~~d~ldeikwg~D~llk~~~~-~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA 160 (433)
T 1ks8_A 82 GYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALA 160 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCB-TTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHH
Confidence 99 899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHc
Q 022932 185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (290)
Q Consensus 185 ~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~ 264 (290)
+||||||++||+||++||++||++|+||++||+.|.++++. .+++|+| +++.||++|||+|||++|||++|+++++++
T Consensus 161 ~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~ 238 (433)
T 1ks8_A 161 AASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESL 238 (433)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGG-GGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCc-CCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998766553 5789999 999999999999999999999999999884
Q ss_pred ----CCCCCCCcccccchhHHHHHHhhcc
Q 022932 265 ----GDDGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 265 ----~~~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+.....+.|+||+|.++++++|+++
T Consensus 239 ~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 267 (433)
T 1ks8_A 239 YDEFGLQNWGGGLNWDSKVSGVQVLLAKL 267 (433)
T ss_dssp HHHTTGGGSCCCCCSSCCHHHHHHHHHHH
T ss_pred HHhcCcCcCcCCcCccchhhHHHHHHhhc
Confidence 2223456899999999999999874
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=7.1e-78 Score=589.77 Aligned_cols=262 Identities=43% Similarity=0.742 Sum_probs=246.1
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCC-CCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRL-PKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTL 102 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~l-p~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~ 102 (290)
+.++++|.++|++||+||++||||.+ |+.++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++
T Consensus 20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~ 99 (466)
T 2xfg_A 20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY 99 (466)
T ss_dssp -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence 66789999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred Hccccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHH
Q 022932 103 EYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETA 180 (290)
Q Consensus 103 e~~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~A 180 (290)
||++.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++.+|++|.|+.++|+|++++++|
T Consensus 100 e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~-~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~A 178 (466)
T 2xfg_A 100 EYEDAFKQSGQYNHILNNIKWACDYFIKCHPE-KDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETS 178 (466)
T ss_dssp HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSB-TTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHH
T ss_pred HhHHHHhcCCCchHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHH
Confidence 999999 889999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHH
Q 022932 181 AALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNF 260 (290)
Q Consensus 181 AalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~ 260 (290)
||||+||||||++||+||++||++||++|+||++||+.|.. + ..+++|+|++++.||++|||+|||+||||++|+++
T Consensus 179 AAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~-~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~ 255 (466)
T 2xfg_A 179 AALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--T-AANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDK 255 (466)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--C-TTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--C-ccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999999999998843 2 35789999889999999999999999999999999
Q ss_pred HHHcCCC----------CCCCcccccchhHHHHHHhhcc
Q 022932 261 IKSVGDD----------GGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 261 a~~~~~~----------~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
++++... ...+.|+||+|..++++||+++
T Consensus 256 a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 294 (466)
T 2xfg_A 256 AESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARI 294 (466)
T ss_dssp HHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHh
Confidence 9985321 2245799999999999999874
No 3
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=3.1e-77 Score=582.20 Aligned_cols=256 Identities=33% Similarity=0.603 Sum_probs=241.3
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCC-CCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHc
Q 022932 26 GNPNYREALAKSLLFFQGQRSGRLPK-DQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEY 104 (290)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QRsG~lp~-~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~ 104 (290)
+.++|.++|++||+||++||||++|+ +++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 56899999999999999999999887 88999999999999999999999999999999999999999999999999999
Q ss_pred cccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccce-EEcCCCCcchhHHHHHHH
Q 022932 105 GKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV-YSVSASNPGSDVAGETAA 181 (290)
Q Consensus 105 ~~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~-~~~~~~~p~t~~~~~~AA 181 (290)
++.| .+++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++.+|++ |.|+.++|+|++++++||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~-~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AA 160 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPN-STTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSA 160 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCS-TTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHH
Confidence 9999 889999999999999999999998 999999999999999999999999999999 999999999999999999
Q ss_pred HHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHH
Q 022932 182 ALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFI 261 (290)
Q Consensus 182 alA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a 261 (290)
|||+||||||++||+||++||++||++|+||++||+.+. .+++|+| +++.||++|||+|||++|||++|++++
T Consensus 161 alAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~------~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a 233 (441)
T 1ia6_A 161 ALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN------GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDA 233 (441)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC------CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHH
T ss_pred HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC------CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999999999999999998643 4689999 999999999999999999999999999
Q ss_pred HHcCCC---------CCCCcccccchhHHHHHHhhcc
Q 022932 262 KSVGDD---------GGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 262 ~~~~~~---------~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+++... ...+.|+||+|..++++||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 270 (441)
T 1ia6_A 234 EQFITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQI 270 (441)
T ss_dssp HHHTTC------CGGGCSSCSSSSCCHHHHHHHHHHH
T ss_pred HHHHhhhhhcccccccCCCcCCccchHHHHHHHHHhc
Confidence 985221 1346799999999999999874
No 4
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=1e-77 Score=605.49 Aligned_cols=263 Identities=29% Similarity=0.557 Sum_probs=243.7
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCC-CCCCCCCCCCCCCCC--------------------------CCcccccccc
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRLPK-DQQITWRSNSGLSDG--------------------------LFAHVDLTGG 76 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~-~~~~~wr~~s~l~Dg--------------------------~~~~~Dl~GG 76 (290)
++++++|.++|++||+||++||||.+|+ +++++||++||+.|+ .+.++||+||
T Consensus 34 ~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsGG 113 (611)
T 2yik_A 34 AAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSGG 113 (611)
T ss_dssp ----CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCCS
T ss_pred ccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCCCcccCCCC
Confidence 6778999999999999999999999887 789999999999998 6789999999
Q ss_pred eecCCCCcccccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhc-----ccCCCCceeEeeCCCCCCCC
Q 022932 77 YYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKC-----ATATPGKLYVGVGDPNADHK 149 (290)
Q Consensus 77 WyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~--~~~~~dlLde~kwg~D~llk~-----~~~~~g~~y~~Vg~~~~Dh~ 149 (290)
|||||||+||++|+++|+++|+|+++||++.| .+++||||||||||+|||||| |+. +|.||+|||++..||.
T Consensus 114 wyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~-~g~~y~qVgdg~~Dh~ 192 (611)
T 2yik_A 114 FHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGN-VVAFCHQVGDGDIDHA 192 (611)
T ss_dssp BCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSC-EEEEEEEESCHHHHTT
T ss_pred ceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCC-CCcEEEEeCCCCcccc
Confidence 99999999999999999999999999999999 889999999999999999999 666 8999999999999999
Q ss_pred CCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCc
Q 022932 150 CWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCP 229 (290)
Q Consensus 150 ~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~ 229 (290)
+|++||+++++|++|.++.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.|.++.+. .++
T Consensus 193 ~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~-~~~ 271 (611)
T 2yik_A 193 FWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDG-PKG 271 (611)
T ss_dssp CCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGT-TTT
T ss_pred CCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-cCc
Confidence 9999999999999999998999999999999999999999999999999999999999999999999999765443 688
Q ss_pred ccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHcCC--CCCCCcccccchhHHHHHHhhcc
Q 022932 230 FYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD--DGGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 230 ~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~~~--~~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+|+| +++.||++|||+|||++|||++|+++++++.. ....+.|+||++..++++||+++
T Consensus 272 ~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~Wd~~~~g~~~lLa~~ 332 (611)
T 2yik_A 272 YYGS-SKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYAPPGWIHCWNDVWSGTACILAEI 332 (611)
T ss_dssp TSCC-CCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTSTTTSCSBTTBCHHHHHHHHHHH
T ss_pred CCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCccCccccchHHHHHHHHhc
Confidence 9999 99999999999999999999999999998643 23456899999999999999874
No 5
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=5.8e-76 Score=592.22 Aligned_cols=261 Identities=48% Similarity=0.843 Sum_probs=246.6
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHcc
Q 022932 26 GNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG 105 (290)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~ 105 (290)
+.++|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932 106 KKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (290)
Q Consensus 106 ~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal 183 (290)
+.| +|++||||||||||+|||||||++ +|.||.|||++..||.+|++||+++.+|++|.++.++|+|++++++||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~-~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAl 160 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPS-PNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAM 160 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSB-TTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHH
Confidence 999 899999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|+||||||++||+||++||++||++|+||++||+.|.++.+ .+++|+|++++.||++|||+|||+||||++|++++++
T Consensus 161 AaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~--~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~ 238 (605)
T 1tf4_A 161 AASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP--AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEY 238 (605)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST--THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC--ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999987655 6789999899999999999999999999999999988
Q ss_pred cCC----CC------CCCcccccchhHHHHHHhhcc
Q 022932 264 VGD----DG------GTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 264 ~~~----~~------~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+.. .. ..+.|+||+|..++++||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 274 (605)
T 1tf4_A 239 EYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE 274 (605)
T ss_dssp HGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHH
T ss_pred HHHhcccccccccccccccccccchHHHHHHHHHhc
Confidence 421 11 125799999999999999874
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1e-75 Score=591.02 Aligned_cols=259 Identities=43% Similarity=0.742 Sum_probs=242.9
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHHHHHHHHHHHcc
Q 022932 26 GNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG 105 (290)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~ 105 (290)
+.++|.++|++||+||++||||.+|+.++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~ 81 (614)
T 1g87_A 2 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDK 81 (614)
T ss_dssp -CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc--CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHH
Q 022932 106 KKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (290)
Q Consensus 106 ~~~--~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAal 183 (290)
+.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++.+|++|.|+.++|||++++++||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~-~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAl 160 (614)
T 1g87_A 82 DAYDKSGQTKYIMDGIKWANDYFIKCNPT-PGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASL 160 (614)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTCCS-TTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHhccC-CCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHH
Confidence 999 789999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 184 A~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|+||||||++||+||++||++||++|+||++||+.+.. + ..+++|+| +++.||++|||+|||+||||++|++++++
T Consensus 161 AaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~-~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~ 236 (614)
T 1g87_A 161 ASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGY--T-AASGYYSS-SSFYDDLSWAAVWLYLATNDSTYLDKAES 236 (614)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--C-TTTTTSCC-SCSHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCC--C-cCcCCcCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999998742 2 25789999 99999999999999999999999999998
Q ss_pred cCCC----------CCCCcccccchhHHHHHHhhcc
Q 022932 264 VGDD----------GGTDVFSWDNKFAGAHVLLARL 289 (290)
Q Consensus 264 ~~~~----------~~~~~~~Wd~~~~~~~~lla~~ 289 (290)
+... ...+.|+||+|..++++||+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~ 272 (614)
T 1g87_A 237 YVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKL 272 (614)
T ss_dssp TGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHH
T ss_pred HHHhhccccccccccccCCcCccchHHHHHHHHHhc
Confidence 4210 2246799999999999999874
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=4.2e-68 Score=538.11 Aligned_cols=255 Identities=19% Similarity=0.243 Sum_probs=227.6
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCC-CCCCCCCCC-CCCCCCCCCC--------CCcccccccceecCCCCcccccchhHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSG-RLPKDQQIT-WRSNSGLSDG--------LFAHVDLTGGYYDAGDNVKFNFPMAFT 93 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG-~lp~~~~~~-wr~~s~l~Dg--------~~~~~Dl~GGWyDAGD~~Ky~~~~a~s 93 (290)
..++++|.++|++||+||++|||| .+|++++++ ||+++++.|+ ++.++||+|||||||||+||++|+|++
T Consensus 123 ~I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t 202 (639)
T 1clc_A 123 KIAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGIT 202 (639)
T ss_dssp EECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHH
T ss_pred eechhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHH
Confidence 456789999999999999999999 599989998 9877665554 678999999999999999999999999
Q ss_pred HHHHHHHHHHccccc----------CccHHHHHHHHHHHHHHHHhcccCCC-CceeEeeCCCCCCCCCCCCCCCCCCccc
Q 022932 94 TTMLSWSTLEYGKKM----------GPELQNARAAIRWATDYLLKCATATP-GKLYVGVGDPNADHKCWERPEDMDTVRS 162 (290)
Q Consensus 94 ~~~L~w~~~e~~~~~----------~~~~~dlLde~kwg~D~llk~~~~~~-g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~ 162 (290)
+++|+|++++|++.| +|++||||||||||+|||||||.+.+ |.+|+|||++.+||. .+||+++.+|+
T Consensus 203 ~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~~~R~ 280 (639)
T 1clc_A 203 VGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEHDERF 280 (639)
T ss_dssp HHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCCSCCE
T ss_pred HHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcCCCce
Confidence 999999999999876 47899999999999999999987536 999999999888886 99999999999
Q ss_pred eEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCC-CCCCCCCCcCcccCCCCCcchHH
Q 022932 163 VYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGA-YSDSLGSAVCPFYCSYSGYKDEL 241 (290)
Q Consensus 163 ~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~-y~~~~~~~~~~~Y~s~~~~~De~ 241 (290)
++. |+|++++++|||||+||||||++||+||++||++||++|+||++||+. |.++.+ ..+++|+| +++.||+
T Consensus 281 ~~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~-~~~g~Y~s-s~~~DEl 353 (639)
T 1clc_A 281 FVP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSG-FSTGEYAT-VSDADDR 353 (639)
T ss_dssp EEE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTT-CCSCCCCC-SCSHHHH
T ss_pred Eec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCcc-ccccccCC-CCcchHH
Confidence 886 579999999999999999999999999999999999999999999998 555433 36789999 9999999
Q ss_pred HHHHHHHHHHcCChhHHHHHHHcCC--C-CCCCcccccchhHHHHHHhh
Q 022932 242 LWGAAWLFRATNDVTYYNFIKSVGD--D-GGTDVFSWDNKFAGAHVLLA 287 (290)
Q Consensus 242 ~wAA~eLy~aTgd~~Yl~~a~~~~~--~-~~~~~~~Wd~~~~~~~~lla 287 (290)
+|||+|||+||||++|+++++++.. . .....|+||+|.++++++|+
T Consensus 354 ~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~f~Wd~~~~~~~~~l~ 402 (639)
T 1clc_A 354 LWAAAEMWETLGDEEYLRDFENRAAQFSKKIEADFDWDNVANLGMFTYL 402 (639)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHTCSSSCCSSCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHHHH
Confidence 9999999999999999999988521 1 12334599999999998887
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=5.2e-66 Score=513.77 Aligned_cols=258 Identities=24% Similarity=0.297 Sum_probs=223.5
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCC-CCCCC----CCCcccccccceecCCCCcccccchhHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGR-LPKDQQITWRSN-SGLSD----GLFAHVDLTGGYYDAGDNVKFNFPMAFTTTML 97 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~-lp~~~~~~wr~~-s~l~D----g~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L 97 (290)
..++++|.++|+++|+||++||||+ +|++++++||++ ||++| |.+.++||+|||||||||+||++|+|+|+++|
T Consensus 82 ~I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L 161 (537)
T 3gzk_A 82 VIHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADL 161 (537)
T ss_dssp EEETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHH
T ss_pred eeCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHH
Confidence 4567899999999999999999999 998899999876 46554 56789999999999999999999999999999
Q ss_pred HHHHHHccccc---------Ccc--HHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEc
Q 022932 98 SWSTLEYGKKM---------GPE--LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSV 166 (290)
Q Consensus 98 ~w~~~e~~~~~---------~~~--~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~ 166 (290)
+|++++|++.| +|+ +||||||||||+|||||||++.+|.+|+|||+..+ ...|.+||+++.+|+++++
T Consensus 162 ~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w-~g~~~~Pe~~~~~R~~~~~ 240 (537)
T 3gzk_A 162 LLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSF-PPLDTRPEDDDAPLVLSPI 240 (537)
T ss_dssp HHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSC-CCTTCCGGGCCSCEEECCB
T ss_pred HHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCc-CCCCcCcccCCCcceEeec
Confidence 99999998876 577 99999999999999999998537999999998532 1223899999999999875
Q ss_pred CCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHH
Q 022932 167 SASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAA 246 (290)
Q Consensus 167 ~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~ 246 (290)
++..++++|||||+|||||+++||+||++||++||++|+|+++||+.+..+..+..+++|++ +++.||++|||+
T Consensus 241 -----~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~~Del~wAA~ 314 (537)
T 3gzk_A 241 -----SYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AELRDELLWASC 314 (537)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCCHHHHHHHHH
T ss_pred -----CCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-CccchHHHHHHH
Confidence 45678999999999999999999999999999999999999999998643323336889999 999999999999
Q ss_pred HHHHHcCChhHHHHHHHcCCCCCCCcccccchhHHHHH--Hhhc
Q 022932 247 WLFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHV--LLAR 288 (290)
Q Consensus 247 eLy~aTgd~~Yl~~a~~~~~~~~~~~~~Wd~~~~~~~~--lla~ 288 (290)
|||++|||++|+++++++......+.|+||+|.+++++ ||++
T Consensus 315 ~Ly~aTgd~~Yl~~a~~~~~~~~~~~~~Wd~~~~~~~~~ll~~~ 358 (537)
T 3gzk_A 315 ALLRMTGDSAWARVCEPLLDLDLPWELGWADVALYGVMDYLRTP 358 (537)
T ss_dssp HHHHHHCCGGGHHHHHHHHHSCCCCCCSSSCCHHHHHHHHHTSC
T ss_pred HHHHHhCCHHHHHHHHHhhhccCCCccchHHhHHHHHHHHHhCc
Confidence 99999999999999998532223368999999998775 5554
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=2.6e-64 Score=508.28 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=222.8
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCC---CCCCCCCCCCCC-CCCC--------C--------------CCCcccccccce
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGR---LPKDQQITWRSN-SGLS--------D--------------GLFAHVDLTGGY 77 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~---lp~~~~~~wr~~-s~l~--------D--------------g~~~~~Dl~GGW 77 (290)
..++++|.++|++||+||++||||. +|...++.|+++ ||+. | |.+.++||+|||
T Consensus 95 ~I~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGw 174 (609)
T 1ut9_A 95 DIRKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGW 174 (609)
T ss_dssp EECTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSB
T ss_pred EeCHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCe
Confidence 3456799999999999999999996 465566779765 5655 4 346799999999
Q ss_pred ecCCCCcccccchhHHHHHHHHHHHHccc-------cc----------CccHHHHHHHHHHHHHHHHhcccCCCC---ce
Q 022932 78 YDAGDNVKFNFPMAFTTTMLSWSTLEYGK-------KM----------GPELQNARAAIRWATDYLLKCATATPG---KL 137 (290)
Q Consensus 78 yDAGD~~Ky~~~~a~s~~~L~w~~~e~~~-------~~----------~~~~~dlLde~kwg~D~llk~~~~~~g---~~ 137 (290)
||||||+||++|+++++++|++.|+.+++ .| +|++||||||||||+|||||||++ +| .+
T Consensus 175 yDAGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~-~g~~~~~ 253 (609)
T 1ut9_A 175 YDAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVT-EKEDPSI 253 (609)
T ss_dssp CCSSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCC-TTTCGGG
T ss_pred eeCCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccC-CCCcceE
Confidence 99999999999999999999888876532 22 478999999999999999999998 66 78
Q ss_pred eEeeCCCCCCCCCC---CCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHH
Q 022932 138 YVGVGDPNADHKCW---ERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQ 214 (290)
Q Consensus 138 y~~Vg~~~~Dh~~w---~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~ 214 (290)
|.|||++..||.+| .+||+++.+|++. +|+|++++++|||||+||||||++||+||++||++||++|+||++
T Consensus 254 ~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~ 328 (609)
T 1ut9_A 254 AGMVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALK 328 (609)
T ss_dssp TTCEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999988999877 4899999999863 489999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCC---CCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHHcCC------C------------CCCCcc
Q 022932 215 YRGAYSDSL---GSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD------D------------GGTDVF 273 (290)
Q Consensus 215 ~~~~y~~~~---~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~~~~------~------------~~~~~~ 273 (290)
||+.|.+.. ....+++|+| +++.||++|||+|||+||||++|+++++++.. . ...+.|
T Consensus 329 ~~~~y~~~~~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 407 (609)
T 1ut9_A 329 HPDIYAEYTPGSGGPGGGPYND-DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCF 407 (609)
T ss_dssp CTTCCBCCCCSSSSCBSCCCCB-SCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSC
T ss_pred CcccccccccccCccCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCcccc
Confidence 999997653 2235789999 89999999999999999999999999998532 0 122469
Q ss_pred cccchhHHHHHHhhc
Q 022932 274 SWDNKFAGAHVLLAR 288 (290)
Q Consensus 274 ~Wd~~~~~~~~lla~ 288 (290)
+||+|.++++++|++
T Consensus 408 ~Wd~~~~~~~~lla~ 422 (609)
T 1ut9_A 408 TWGTTQGLGTITLAL 422 (609)
T ss_dssp CSSCCHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHh
Confidence 999999999999984
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.9e-50 Score=401.68 Aligned_cols=225 Identities=22% Similarity=0.346 Sum_probs=177.7
Q ss_pred ccCchhH-HHHHHHHHhhhHHhcCCCC--CCCCCCCCCCCCCCCCCCCcccccccceecC-CCCcccccchhHHH-----
Q 022932 24 AHGNPNY-REALAKSLLFFQGQRSGRL--PKDQQITWRSNSGLSDGLFAHVDLTGGYYDA-GDNVKFNFPMAFTT----- 94 (290)
Q Consensus 24 ~~~~~~Y-~~~l~~sl~fy~~QRsG~l--p~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDA-GD~~Ky~~~~a~s~----- 94 (290)
..++++| ..+++++|+||++||||.+ |.+.+++|+++ +.++||+|||||| |||+||++|+|||+
T Consensus 90 ~I~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npq 162 (586)
T 3h7l_A 90 TVGEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQ 162 (586)
T ss_dssp EEETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCC
T ss_pred EEccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhhcccc
Confidence 3456786 8999999999999999974 56678888874 5789999999999 99999999998876
Q ss_pred --HHHHHHHHH----ccccc---CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccce--
Q 022932 95 --TMLSWSTLE----YGKKM---GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV-- 163 (290)
Q Consensus 95 --~~L~w~~~e----~~~~~---~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~-- 163 (290)
++++|++++ +++.+ ..++||||||+|||+|||||||++ +|+||+||||+ |..+ +++|.+
T Consensus 163 Q~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~-~g~~y~qVgd~------W~~d---~~~R~~~~ 232 (586)
T 3h7l_A 163 QTPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNE-KGFFYMTVFDK------WSKD---TAQREICA 232 (586)
T ss_dssp CHHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCT-TSCBBCEEECT------TCCC---GGGCEEEE
T ss_pred hhhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccC-CCeEEEEecCC------CCCC---CCcccccc
Confidence 466666655 44443 124899999999999999999999 99999999984 6532 445654
Q ss_pred EEcCCCCc-------chhHHHHHHHHHHHhcccccCCCHHH-HHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCC
Q 022932 164 YSVSASNP-------GSDVAGETAAALAAASLVFRKGDPRY-ASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYS 235 (290)
Q Consensus 164 ~~~~~~~p-------~t~~~~~~AAalA~as~v~~~~D~~y-A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~ 235 (290)
|.+....| .+..++.+|||||+|||||+ |+.| +++||++|+++|+|+++||+.|.++ ++ +
T Consensus 233 ~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~---------g~-~ 300 (586)
T 3h7l_A 233 YETQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND---------GE-E 300 (586)
T ss_dssp EETTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT---------SC-C
T ss_pred ccCCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC---------CC-c
Confidence 32221111 12456789999999999997 7889 9999999999999999999877532 13 6
Q ss_pred CcchHH--HHHHHHHHHHcCChhHHHHHHHcC-----C--CCCCCcccccc
Q 022932 236 GYKDEL--LWGAAWLFRATNDVTYYNFIKSVG-----D--DGGTDVFSWDN 277 (290)
Q Consensus 236 ~~~De~--~wAA~eLy~aTgd~~Yl~~a~~~~-----~--~~~~~~~~Wd~ 277 (290)
++.||+ +|||+|||++|||++||++++++. . ......|.|.+
T Consensus 301 ~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~ 351 (586)
T 3h7l_A 301 NIIDEYCALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSA 351 (586)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBS
T ss_pred cchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCC
Confidence 789999 999999999999999999998731 0 12234577884
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.00 E-value=0.062 Score=50.10 Aligned_cols=179 Identities=13% Similarity=0.052 Sum_probs=104.7
Q ss_pred HHHHHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccchhHHH
Q 022932 15 FLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTT 94 (290)
Q Consensus 15 ~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~ 94 (290)
++.++-.-..-++..|.+++.+.+.|...+..+.+ ..+++| | .++-+
T Consensus 52 ~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~------------------------~~~~~D--D-------~a~~~ 98 (349)
T 3k7x_A 52 VEVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTL------------------------IHDFYD--D-------MLWNA 98 (349)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSS------------------------CCSBHH--H-------HHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCC------------------------CccCcc--H-------HHHHH
Confidence 34455555577899999999999998764321211 123344 3 23322
Q ss_pred HHHHHHHHHcccccCccHHHHHHHHHHHHHHH-HhcccCC-CCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcc
Q 022932 95 TMLSWSTLEYGKKMGPELQNARAAIRWATDYL-LKCATAT-PGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPG 172 (290)
Q Consensus 95 ~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~l-lk~~~~~-~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~ 172 (290)
..++-+|+. .+-|.-|+.++-..++| .+-.++. .|+++-++. +..|+.
T Consensus 99 la~~~aye~------t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------ 148 (349)
T 3k7x_A 99 LAAYRLYKA------TGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------ 148 (349)
T ss_dssp HHHHHHHHH------HCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------
T ss_pred HHHHHHHHH------HCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------
Confidence 222223322 24578888998899998 4443331 355554431 122331
Q ss_pred hhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---c-CCCCCCCCCCcCcccCCC-CCcc---hHHHHH
Q 022932 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R-GAYSDSLGSAVCPFYCSY-SGYK---DELLWG 244 (290)
Q Consensus 173 t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~---~-~~y~~~~~~~~~~~Y~s~-~~~~---De~~wA 244 (290)
+-..+.++.++|..++++. | .++|+.|++.|+|..++ | +.+.+.... ...-+... ..|. --++.+
T Consensus 149 aisN~~~~~~la~l~~~tg--d----~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~-~~~g~~~~~~~~tYnqg~~l~g 221 (349)
T 3k7x_A 149 TPVNAPFIILSCWLYNELN--E----TKYLEWAMKTYEWQTKVLVREDGFVEDGINR-LEDGTIDYEWKFTYNQGVYIGA 221 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHHHBCTTSCBCCEECT-TSSSCBCTTCCCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhC--C----HHHHHHHHHHHHHHHhcCCCCCCeEecCCcc-CCCCccCCcCeeeHHHHHHHHH
Confidence 2234666777777788875 4 46899999999999875 2 222222110 00001110 1222 358999
Q ss_pred HHHHHHHcCChhHHHHHHH
Q 022932 245 AAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 245 A~eLy~aTgd~~Yl~~a~~ 263 (290)
+++||++|||++|++.+++
T Consensus 222 ~~~LY~~T~d~~yl~~a~~ 240 (349)
T 3k7x_A 222 NLELYRITKEAIYLDTANK 240 (349)
T ss_dssp HHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHhhCcHHHHHHHHH
Confidence 9999999999999999877
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.89 E-value=0.0033 Score=59.57 Aligned_cols=143 Identities=13% Similarity=0.089 Sum_probs=79.2
Q ss_pred cccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhc-ccCCC-CceeEeeCCCCCCCCCCCCCCCCCCcc
Q 022932 84 VKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC-ATATP-GKLYVGVGDPNADHKCWERPEDMDTVR 161 (290)
Q Consensus 84 ~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~-~~~~~-g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R 161 (290)
.|.+.-.+--++.++.++..+ +.|+.++.++-+++||++- .++ + |++|..+-+ +.|.+. .+
T Consensus 48 ~k~l~~n~r~i~~~a~a~~~~------g~~~~l~~A~~~~~fl~~~~~d~-~~Gg~~~~~~d--------G~~~~~--~~ 110 (402)
T 3gt5_A 48 HRHLVSSTRFVFNYAMAYLQF------GTAEYLDAVHHGLSYVRDVHRNP-ATGGYAWTLCD--------DRVEDD--TN 110 (402)
T ss_dssp EEEHHHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHTTBCT-TTSCBCSEEET--------TEEEEC--CE
T ss_pred chhHHHHHHHHHHHHHHHHhh------CChHHHHHHHHHHHHHHHhCccC-CCCcEEEEeeC--------CCCCcC--Cc
Confidence 465554455555554444322 4588999999999999984 444 4 888888732 122111 12
Q ss_pred ceEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---c--CCCCCCC-CCCcCcccCCCC
Q 022932 162 SVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R--GAYSDSL-GSAVCPFYCSYS 235 (290)
Q Consensus 162 ~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~---~--~~y~~~~-~~~~~~~Y~s~~ 235 (290)
.+| + .+-+++|++. ..+..|+. +|+.|+++++...++ | |.|.+.. ++.....|.+
T Consensus 111 ~ly---------d---~Af~i~al~~-~~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~-- 171 (402)
T 3gt5_A 111 HCY---------G---LAFVMLAYSC-GLKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRG-- 171 (402)
T ss_dssp EHH---------H---HHHHHHHHHH-HHHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEE--
T ss_pred chH---------H---HHHHHHHHHH-HHHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCC--
Confidence 222 1 2222233332 22234544 677788888888765 2 3333210 1000011111
Q ss_pred CcchH--HHHHHHHHHHHcCChhHHHHHHH
Q 022932 236 GYKDE--LLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 236 ~~~De--~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
..+. ++-|.+.||++||++.|++.+++
T Consensus 172 -~n~~m~l~eall~L~~~tgd~~~~~~a~~ 200 (402)
T 3gt5_A 172 -QNANMHMCEAMLAAYEASGEQRYLERALV 200 (402)
T ss_dssp -HHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 1222 56679999999999999998876
No 13
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.22 E-value=0.03 Score=51.97 Aligned_cols=146 Identities=12% Similarity=-0.011 Sum_probs=84.2
Q ss_pred cccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhc-ccCCCCceeEeeCCCCCCCCCCCCCCCCCCccc
Q 022932 84 VKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC-ATATPGKLYVGVGDPNADHKCWERPEDMDTVRS 162 (290)
Q Consensus 84 ~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~-~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~ 162 (290)
-|.+.-.|-.+..++.++.. .-+-|..++.++-+++||++- +++ +|++|+.+.. | +.|.+. .+.
T Consensus 49 eK~l~~nar~i~~~a~a~~~-----~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~---d----g~~~~~--~~~ 113 (388)
T 2gz6_A 49 DKFIWLQNRQVWTFSMLCNQ-----LEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTR---G----GEPLVQ--PYN 113 (388)
T ss_dssp CEEHHHHHHHHHHHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECT---T----SCBCCC--CCC
T ss_pred chhHHHHHHHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcC---C----CCcccC--Ccc
Confidence 36555444444444433332 023478999999999999986 565 7899988742 1 122111 111
Q ss_pred eEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---c-CCCCCCCCCCcCcccCCCCCcc
Q 022932 163 VYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R-GAYSDSLGSAVCPFYCSYSGYK 238 (290)
Q Consensus 163 ~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~---~-~~y~~~~~~~~~~~Y~s~~~~~ 238 (290)
...-+-++.+|+.++++.. |+ ++|+.|+++.++..++ + +.+....++ . ..+.. .+..
T Consensus 114 ----------~~~~af~i~al~~~y~~tg--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~-~-~~~~~-~~~~ 174 (388)
T 2gz6_A 114 ----------IFSDCFAAMAFSQYALASG--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPG-T-RPMKA-LAVP 174 (388)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHTC---------------C-CCCEE-THHH
T ss_pred ----------hHHHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCC-C-CCCCC-CCHH
Confidence 1233556677777777764 54 5677888888887765 1 222211111 0 11111 1111
Q ss_pred hHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 239 DELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 239 De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
--++.|.+.||++|+++.|++.+++
T Consensus 175 ~~~~~all~l~~~t~d~~~~~~A~~ 199 (388)
T 2gz6_A 175 MILANLTLEMEWLLPQETLENVLAA 199 (388)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 2467778999999999999998876
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.89 E-value=0.15 Score=47.21 Aligned_cols=112 Identities=10% Similarity=-0.019 Sum_probs=70.9
Q ss_pred HHHH-HhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccc-ccCCCHHHHHH
Q 022932 123 TDYL-LKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV-FRKGDPRYASL 200 (290)
Q Consensus 123 ~D~l-lk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v-~~~~D~~yA~~ 200 (290)
+.|. .++++. .|+||+++.. |.. ..|. .......+..+.++|.|+++ ++ +| .
T Consensus 21 l~fw~~~~~D~-~GGf~~~~~~---d~~--~~~~--------------eK~l~~nar~i~~~a~a~~~~~~--~~----~ 74 (388)
T 2gz6_A 21 LPFWENHSLDS-EGGYFTCLDR---QGK--VYDT--------------DKFIWLQNRQVWTFSMLCNQLEK--RE----N 74 (388)
T ss_dssp HHHHHHHCBCT-TSSBCCEEBT---TSC--EEEC--------------CEEHHHHHHHHHHHHHHHHHTCC--CH----H
T ss_pred HHHHHhcCCCC-CCCEEeEECC---CCC--cCCc--------------chhHHHHHHHHHHHHHHHHHhcC--CH----H
Confidence 3444 668888 8899998864 211 1121 12334568999999999998 55 44 5
Q ss_pred HHHHHHHHHHHHHHc----cCCCCCCC-CCCcCcccCCCCCcc-h--HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 201 LLRTAKNVLQFAMQY----RGAYSDSL-GSAVCPFYCSYSGYK-D--ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 201 ~L~~A~~~~~~a~~~----~~~y~~~~-~~~~~~~Y~s~~~~~-D--e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
+++.|++..+|..++ .|.+.... .+ +.+.- . .... | =+++|.+++|++||++.|++.|++
T Consensus 75 ~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~d-g~~~~-~-~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~ 142 (388)
T 2gz6_A 75 WLKIARNGAKFLAQHGRDDEGNWYFALTRG-GEPLV-Q-PYNIFSDCFAAMAFSQYALASGEEWAKDVAMQ 142 (388)
T ss_dssp HHHHHHHHHHHHHHHSBCTTSCBCSEECTT-SCBCC-C-CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCC-CCccc-C-CcchHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 788899999999886 22222111 11 11100 0 1111 2 267788899999999999999877
No 15
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=95.17 E-value=0.15 Score=47.63 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHH-hcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccccc-C
Q 022932 115 ARAAIRWATDYLL-KCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR-K 192 (290)
Q Consensus 115 lLde~kwg~D~ll-k~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~-~ 192 (290)
+..|+.=-+.+++ ++.+...|+|+..+.. |.. |-.. ++ .....+.++.++|.+++++. .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg~----~~~~--~k----------~l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DGR----VYDD--LK----------YVWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TSC----BSCC--CE----------EHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CCC----CCCC--cc----------chhhhHHHHHHHHHHHHHhccc
Confidence 4455566677887 6777656788888864 211 2111 11 22345788899999999871 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHc----c-C-CCCCCC-CCCcCcccCCCCCc--chHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 193 GDPRYASLLLRTAKNVLQFAMQY----R-G-AYSDSL-GSAVCPFYCSYSGY--KDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 193 ~D~~yA~~~L~~A~~~~~~a~~~----~-~-~y~~~~-~~~~~~~Y~s~~~~--~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
.+| ++++.|++..+|..++ . | .+..+. .+ +.+.-.. ... .--++||.+++|++||+..|++.+.+
T Consensus 76 ~~~----~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~d-g~~~~~~-~~lyd~af~~~a~~~~~~atgd~~~~~~A~~ 149 (402)
T 1fp3_A 76 HRP----ELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRD-GRPVKVQ-RSIFSECFYTMAMNELWRVTAEARYQSEAVD 149 (402)
T ss_dssp CCH----HHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTT-SCEEECC-SSSHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCH----HHHHHHHHHHHHHHHhccCcCCCCceEEEECCC-CCccccc-cchHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 143 6788999999999875 1 1 221111 11 0000000 111 12478899999999999999998776
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.26 E-value=0.077 Score=50.02 Aligned_cols=120 Identities=12% Similarity=0.047 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHH-hcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccCC
Q 022932 115 ARAAIRWATDYLL-KCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKG 193 (290)
Q Consensus 115 lLde~kwg~D~ll-k~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~~ 193 (290)
+..|+.=-+.|.+ ++.++ .|+||..++.. +.|.+.. . ...-..+.++.++|.|++++.
T Consensus 11 l~~~~~~~l~fw~~~~~D~-~GGf~~~l~~d-------g~~~~~~-~----------k~l~~n~r~i~~~a~a~~~~g-- 69 (402)
T 3gt5_A 11 LRTHISDTMAFYHPRCIDS-AGGFFHYFRDD-------GSIYNAT-H----------RHLVSSTRFVFNYAMAYLQFG-- 69 (402)
T ss_dssp HHHHHHHHHHHHTTTTBCT-TSSBCCEECTT-------SCEEESS-E----------EEHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhcCCCC-CcCeeeEECCC-------CCCCCCC-c----------hhHHHHHHHHHHHHHHHHhhC--
Confidence 5677777788765 67776 89999888642 1111110 1 123456899999999999985
Q ss_pred CHHHHHHHHHHHHHHHHHHHHc---c--CCCCCCCCCCcCcccCCCCCcc-h--HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 194 DPRYASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGYK-D--ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 194 D~~yA~~~L~~A~~~~~~a~~~---~--~~y~~~~~~~~~~~Y~s~~~~~-D--e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
+ ..+++.|++..+|..++ | |.+.-...+ +.+. .. ..+. | =+++|.++ |.+||++.|++.|++
T Consensus 70 ~----~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~d-G~~~-~~-~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~ 139 (402)
T 3gt5_A 70 T----AEYLDAVHHGLSYVRDVHRNPATGGYAWTLCD-DRVE-DD-TNHCYGLAFVMLAYSC-GLKVGIKQAREWMDE 139 (402)
T ss_dssp C----HHHHHHHHHHHHHHHHTTBCTTTSCBCSEEET-TEEE-EC-CEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHH
T ss_pred C----hHHHHHHHHHHHHHHHhCccCCCCcEEEEeeC-CCCC-cC-CcchHHHHHHHHHHHH-HHHhCChhHHHHHHH
Confidence 4 45789999999999875 1 221111011 0000 00 1122 2 26678889 888999999998876
No 17
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=93.12 E-value=0.35 Score=46.01 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccC
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRK 192 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~ 192 (290)
++.++.+.=.+|+|+.-..+ .+++....+.. +.|. +.++ .|+ +.....+|+.|++++.
T Consensus 133 ~~~~~~~~~aA~~L~~r~~~-~~g~iqsw~~~-------~~~~----~~~~-iID--------~~mni~~L~~A~~~~g- 190 (397)
T 2zzr_A 133 VKALEATIKAADKLMERYQE-KGGFIQAWGEL-------GYKE----HYRL-IID--------CLLNIQLLFFAYEQTG- 190 (397)
T ss_dssp HHHHHHHHHHHHHHHTTEET-TTTEECCSSST-------TCGG----GCEE-ETT--------HHHHTHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhCc-CCCEEEecccC-------CCCC----CCce-eec--------hHhHHHHHHHHHHHhC-
Confidence 56788888889999876555 44433333210 1121 1222 222 2446789999999985
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccCC-CCC---CCCCCcCccc-CCCCCcchH---------HHHHHHHHHHHcCChhHH
Q 022932 193 GDPRYASLLLRTAKNVLQFAMQYRGA-YSD---SLGSAVCPFY-CSYSGYKDE---------LLWGAAWLFRATNDVTYY 258 (290)
Q Consensus 193 ~D~~yA~~~L~~A~~~~~~a~~~~~~-y~~---~~~~~~~~~Y-~s~~~~~De---------~~wAA~eLy~aTgd~~Yl 258 (290)
||.|.+...+||+..-+......+. |+. ++.+ +.... ....++.|+ +++|-++||++|+|+.||
T Consensus 191 -d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~-G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL 268 (397)
T 2zzr_A 191 -DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPET-GEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQI 268 (397)
T ss_dssp -CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTT-CCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCC-CCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 7776555555555554443221121 221 0001 11100 001344454 688889999999999999
Q ss_pred HHHHH
Q 022932 259 NFIKS 263 (290)
Q Consensus 259 ~~a~~ 263 (290)
+.|++
T Consensus 269 ~~A~~ 273 (397)
T 2zzr_A 269 ILFKG 273 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99887
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.83 E-value=0.86 Score=43.92 Aligned_cols=135 Identities=15% Similarity=0.045 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCC
Q 022932 91 AFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASN 170 (290)
Q Consensus 91 a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~ 170 (290)
++.+.-|+-.+...|+. ..+.+.+++.++=-++.|++.|++ +| ++++|=+. |+ .|
T Consensus 269 GW~~~gl~~~l~~lp~~-~~~r~~l~~~~~~~a~~l~~~Q~~-~G-~W~~vld~---------~~-------~y------ 323 (445)
T 3k11_A 269 GWALLTACELLDVLPED-YPQRPKVMDYFRAHVRGVTALQSG-EG-FWHQLLDC---------ND-------SY------ 323 (445)
T ss_dssp HHHHHHHHHHHHHSCTT-CTTHHHHHHHHHHHHHHHHTTCCT-TS-CEESBTTC---------TT-------SC------
T ss_pred hHHHHHHHHHHHhcccc-cccHHHHHHHHHHHHHHHHHhCCC-CC-chhhccCC---------CC-------CC------
Confidence 44444444444445543 245788999999999999999987 76 67776441 21 11
Q ss_pred cchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcc---CCCCCCC-CCC---cCcccCCCCCcc-----
Q 022932 171 PGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR---GAYSDSL-GSA---VCPFYCSYSGYK----- 238 (290)
Q Consensus 171 p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~---~~y~~~~-~~~---~~~~Y~s~~~~~----- 238 (290)
+-|.+++.+|.+|+.+.+. .-.| +++++..|+++|+-+..+- |...... ..+ ...+|.+...-.
T Consensus 324 ~EsSaTAmfaygllkgvr~-G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g~d~~~Y~~~p~~~~d~~G 399 (445)
T 3k11_A 324 LETSATAIYVYCLAHAINK-GWID---AIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHG 399 (445)
T ss_dssp EEHHHHHHHHHHHHHHHHH-TSSC---HHHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCTTCGGG
T ss_pred CCccHHHHHHHHHHHHHHc-CCCC---HHHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCCCCchhhccCcccCCCCcc
Confidence 2356788999999988774 2234 4679999999999998752 2211100 000 112333312111
Q ss_pred -hHHHHHHHHHHHHcCC
Q 022932 239 -DELLWGAAWLFRATND 254 (290)
Q Consensus 239 -De~~wAA~eLy~aTgd 254 (290)
--++||++|+.+..++
T Consensus 400 ~G~fllA~~E~~~l~~~ 416 (445)
T 3k11_A 400 YGPVLWAGAEMIRLLNT 416 (445)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 2499999999998543
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=92.80 E-value=0.46 Score=44.81 Aligned_cols=126 Identities=19% Similarity=0.136 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccC
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRK 192 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~ 192 (290)
+..++.+.=.+++|+.-.++ .+++....+.. +.|++ ..+ ..|+. .....+|+.|++++.
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~-~~g~i~sw~~~-------~~~~~---~~~-~iID~--------mmni~~L~~A~~~~g- 165 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRA-DAGIIQAWGPK-------GDPEN---GGR-IIIDC--------LLNLPLLLWAGEQTG- 165 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEET-TTTEECCBSST-------TCTTT---TTE-EEGGG--------GGGHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhCCC-CCCeEEeccCC-------CCCCC---Cce-EEech--------HHHHHHHHHHHHHhC-
Confidence 56778888888888877665 43332222210 12221 112 23331 344789999999985
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccCC-CC----CCCCCCcCcc--cCCCCCcchH---------HHHHHHHHHHHcCChh
Q 022932 193 GDPRYASLLLRTAKNVLQFAMQYRGA-YS----DSLGSAVCPF--YCSYSGYKDE---------LLWGAAWLFRATNDVT 256 (290)
Q Consensus 193 ~D~~yA~~~L~~A~~~~~~a~~~~~~-y~----~~~~~~~~~~--Y~s~~~~~De---------~~wAA~eLy~aTgd~~ 256 (290)
||.|.+...+||+..-+......+. ++ ++.. +... ..- .++.|+ ++++-++||+.|+++.
T Consensus 166 -d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~t--G~~~~~~t~-qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~ 241 (377)
T 2ahf_A 166 -DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPEN--GNAIRGGTH-QGNTDGSTWTRGQAWGIYGFALNSRYLGNAD 241 (377)
T ss_dssp -CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTT--CCEEEEECS-SSSSTTSCBHHHHHHHHHHHHHHHHHHTCHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCC--CCeeeCCCc-CCcCCcchhHHHHHHHHHHHHHHHHHHCChH
Confidence 6666554444444443333211121 22 1111 1110 011 345555 6788899999999999
Q ss_pred HHHHHHH
Q 022932 257 YYNFIKS 263 (290)
Q Consensus 257 Yl~~a~~ 263 (290)
||+.+++
T Consensus 242 yL~~A~~ 248 (377)
T 2ahf_A 242 LLETAKR 248 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=91.50 E-value=0.55 Score=43.69 Aligned_cols=85 Identities=12% Similarity=0.000 Sum_probs=51.1
Q ss_pred cchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH-HHc---c--C-CCCCCCCCC-cCcccCCCCC---cch
Q 022932 171 PGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFA-MQY---R--G-AYSDSLGSA-VCPFYCSYSG---YKD 239 (290)
Q Consensus 171 p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a-~~~---~--~-~y~~~~~~~-~~~~Y~s~~~---~~D 239 (290)
||-+ .+++-.|+.+++++. || ++++.|+++++++ .++ + + .+.....++ ...++.+... -.-
T Consensus 246 pgh~--ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qa 317 (402)
T 1fp3_A 246 PGHA--LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHS 317 (402)
T ss_dssp HHHH--HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHH
T ss_pred CCcH--HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHH
Confidence 5544 345556888888874 55 5677788888888 543 1 2 221100100 0111111000 012
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHH
Q 022932 240 ELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 240 e~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|.+.|++.||++|||+.|++.+++
T Consensus 318 ea~~a~l~ly~~tgd~~yl~~a~~ 341 (402)
T 1fp3_A 318 EAMIAFLMGYSESGDPALLRLFYQ 341 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 789999999999999999998776
No 21
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=89.64 E-value=1.2 Score=41.29 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=46.8
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHH---HHHHHHHHcC
Q 022932 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW---GAAWLFRATN 253 (290)
Q Consensus 177 ~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~w---AA~eLy~aTg 253 (290)
+.+..+|.-++++.. |+ ++++.|++...+.....+.+ .. .++.||..| |.+.+|++||
T Consensus 49 a~~~~~l~d~~~~tg--d~----~y~~~a~~~~~~~~~~~~~~-----------~~--~~~~DD~a~~~la~~~aye~t~ 109 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTK--KQ----ADLEVAEKTYLHNKNRNGGT-----------LI--HDFYDDMLWNALAAYRLYKATG 109 (349)
T ss_dssp HHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHTTSS-----------SC--CSBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCCC-----------CC--ccCccHHHHHHHHHHHHHHHHC
Confidence 444588888888874 55 45677777777776532111 11 345566554 8899999999
Q ss_pred ChhHHHHHHH
Q 022932 254 DVTYYNFIKS 263 (290)
Q Consensus 254 d~~Yl~~a~~ 263 (290)
+++||+.++.
T Consensus 110 ~~~yL~~A~~ 119 (349)
T 3k7x_A 110 KSIYLEDAQL 119 (349)
T ss_dssp CHHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 9999998875
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=89.30 E-value=1 Score=42.44 Aligned_cols=143 Identities=10% Similarity=0.003 Sum_probs=80.1
Q ss_pred cccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCC-CceeEeeCCCCCCCCCCCCCCCCCCccc
Q 022932 84 VKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATP-GKLYVGVGDPNADHKCWERPEDMDTVRS 162 (290)
Q Consensus 84 ~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~-g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~ 162 (290)
-|.+.-.+--++.++-++. + +-|+.++-++-+++||++-..+.. |++|+.|.. | |.+|. + ..
T Consensus 47 ~k~~~~nar~i~~~a~a~~-~------g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~---d---g~~~~--~--k~ 109 (421)
T 2zbl_A 47 GTHLWITARMLHVYSVAAS-M------GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND---Q---GVVDA--S--KQ 109 (421)
T ss_dssp CEEHHHHHHHHHHHHHHHH-T------TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET---T---EEEEC--C--EE
T ss_pred hhhHHHHHHHHHHHHHHHH-c------CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC---C---CCcCC--c--hh
Confidence 4666555555555544442 2 236789999999999987643323 788877731 1 22332 1 11
Q ss_pred eEEcCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---c--CCCCCC-CCCC-cCcccCCCC
Q 022932 163 VYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R--GAYSDS-LGSA-VCPFYCSYS 235 (290)
Q Consensus 163 ~~~~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~---~--~~y~~~-~~~~-~~~~Y~s~~ 235 (290)
+ ..-+.++.+++. +++.. ++ ..++.|+++.++.+++ | |.|... ..+. ...-+ .
T Consensus 110 l----------yd~Af~i~al~~-~~~tg--~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~---~ 169 (421)
T 2zbl_A 110 G----------YQHFFALLGAAS-AVTTG--HP----EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDY---R 169 (421)
T ss_dssp H----------HHHHHHHHHHHH-HHTTT--CT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSC---E
T ss_pred H----------HHHHHHHHHHHH-HHHhC--Cc----cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCccccc---C
Confidence 1 112455556665 55543 33 4567777888888764 2 222211 0100 00001 1
Q ss_pred CcchH--HHHHHHHHHHHcCChhHHHHHHH
Q 022932 236 GYKDE--LLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 236 ~~~De--~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
..... ++-|.+.|+++||++.|++.+++
T Consensus 170 ~~n~~m~~~~al~~l~~~tgd~~~~~~A~~ 199 (421)
T 2zbl_A 170 GGNANMHAVEAFLIVYDVTHDKKWLDRALR 199 (421)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCTHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 12333 47788899999999999987766
No 23
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=84.36 E-value=7.3 Score=36.36 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceeEeeCCCC-CCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccccc
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLYVGVGDPN-ADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR 191 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~-~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~ 191 (290)
++|.+.++-.++-|+++.+. +|.|-.+..++. .| +....++-| ..|-...+|..++.+.+
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~-~~~f~~~~~~~~~~d--------~k~~~~W~W----------t~G~~~~gl~~~ye~Tg 85 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDE-SGQFLLRLDDGRVID--------TKGWAGWEW----------THGVGLYGIYQYYQQTG 85 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCT-TCTTCEECTTSCEEC--------SSSTTSCSH----------HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccCc-cccccccCCcccccc--------CCCCcCccc----------cHHHHHHHHHHHHHHHC
Confidence 45666777777888888776 787777764421 11 011122222 12566778888888875
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 192 KGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 192 ~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
|+.| ++.|++.++......+... ..+.++. ..+.++||+.|||++|++.+..
T Consensus 86 --d~~y----~~~a~~~~~~~~~~~~~~~------n~D~~~~--------~~~l~~lY~~Tgd~~Yl~~a~~ 137 (382)
T 3pmm_A 86 --DIEM----RDIIDRWFADRFAEGATTK------NVNTMAP--------FLTLAYRFEETGRMAYLPWLES 137 (382)
T ss_dssp --CHHH----HHHHHHHHHHHHHHCCCCC------CTTTTTT--------HHHHHHHHHHHCCGGGHHHHHH
T ss_pred --CHHH----HHHHHHHHHHHHcCCCCcC------cccchHH--------HHHHHHHHHHhCCHHHHHHHHH
Confidence 5554 4444444443222211110 0111111 3466999999999999998864
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=79.90 E-value=33 Score=31.84 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=64.6
Q ss_pred hhHHHHHHHHHHHH--cccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcC
Q 022932 90 MAFTTTMLSWSTLE--YGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS 167 (290)
Q Consensus 90 ~a~s~~~L~w~~~e--~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~ 167 (290)
.++.+.-|+-.+.. .|.. ..+.+.+++.++=-+++|++.|++ +| ++++|=+ .|+ .|
T Consensus 235 ~gW~~~gl~~~l~~l~~p~~-~~~~~~~~~~~~~~a~~~~~~q~~-~G-~W~~~~d---------~~~-------~y--- 292 (382)
T 3pmm_A 235 NSWLTMVIPDFLELVDLPEG-NAVRRYLITVLDAQIAALAECQDD-SG-LWHTLLD---------DPH-------SY--- 292 (382)
T ss_dssp HHHHHHHHHHHHHHHCCCTT-CHHHHHHHHHHHHHHHHHHHHCCT-TS-CEESBTT---------CTT-------SC---
T ss_pred ccHHHHHHHHHHHhhcCCcc-hhhHHHHHHHHHHHHHHHHHcCCC-CC-ChhhccC---------CCC-------CC---
Confidence 34444444434433 3322 245678999999999999999997 77 5667643 122 12
Q ss_pred CCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 022932 168 ASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 168 ~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
+-|.+++.+|.+|+-+.+. .-.+ ++++..|+++|+-+.++
T Consensus 293 ---~EsSatA~~ay~ll~~~~~-g~l~----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 293 ---LEASATAGFAYGILKAVRK-RYVG----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp ---EEHHHHHHHHHHHHHHHHT-TSSC----GGGHHHHHHHHHHHHHT
T ss_pred ---ccccHHHHHHHHHHHHHHc-CCCc----HHHHHHHHHHHHHHHhh
Confidence 2356789999999998882 1113 46899999999999886
No 25
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=74.79 E-value=23 Score=32.67 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccc---
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV--- 189 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v--- 189 (290)
+...+-++=|++|||.||.+ +|+. .|. .|+... +.-.|+.+ =|+++.+.-.|+....-
T Consensus 93 ~~y~~Ai~Rgl~wlL~mQ~~-nGGW-pqF-----------dpd~~~---Yl~~IpFn---DDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 93 TKYRDAVRKAANFLVNSQYS-TGAL-PQF-----------YPLKGG---YSDHATFN---DNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TSCC-BSE-----------ESCCSG---GGGSEECG---GGHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHHHHHhccCC-CCCc-ccc-----------CCCccc---ccccCCcc---hHHHHHHHHHHHHHHhccCC
Confidence 67889999999999999998 7741 111 022111 11112222 27889999988887542
Q ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHHcc
Q 022932 190 FR---KGDPRYASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 190 ~~---~~D~~yA~~~L~~A~~~~~~a~~~~ 216 (290)
|. -.|+.. .+...+.+++-+|+.+.+
T Consensus 154 ~~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 154 FDTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp SCSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred ccccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 21 124555 778888999999998863
No 26
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=74.73 E-value=50 Score=30.69 Aligned_cols=146 Identities=14% Similarity=0.024 Sum_probs=78.9
Q ss_pred HHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeC----CCCCCCCCCCCCCCCCCccceEEcCCC
Q 022932 94 TTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVG----DPNADHKCWERPEDMDTVRSVYSVSAS 169 (290)
Q Consensus 94 ~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg----~~~~Dh~~w~~Pe~~~~~R~~~~~~~~ 169 (290)
+..|+|+...+. -|+.+++++=-++++++-+...+|.++|.+- ++..-|. |..|.-.++..+
T Consensus 154 i~~L~~A~~~~g------d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds~W------- 219 (377)
T 2ahf_A 154 LPLLLWAGEQTG------DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGSTW------- 219 (377)
T ss_dssp HHHHHHHHHHHC------CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTSCB-------
T ss_pred HHHHHHHHHHhC------CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcchh-------
Confidence 677888887653 3678999999999999987653788888875 2211000 111100000111
Q ss_pred CcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-cC--C-CCCCCCCCcCcccCCCCCcchHHHHHH
Q 022932 170 NPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-RG--A-YSDSLGSAVCPFYCSYSGYKDELLWGA 245 (290)
Q Consensus 170 ~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~-~~--~-y~~~~~~~~~~~Y~s~~~~~De~~wAA 245 (290)
+-.-+-++-+++..++.-+ | .++|+.|+++-++..++ |. . |-+...+....-+.+ ++-.-=.+.+-
T Consensus 220 ---aRGqAw~i~gl~~ly~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d-~Sa~aiaA~~L 289 (377)
T 2ahf_A 220 ---TRGQAWGIYGFALNSRYLG--N----ADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRD-SSASAITACGL 289 (377)
T ss_dssp ---HHHHHHHHHHHHHHHHHHT--C----HHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBC-HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHC--C----hHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccC-CCHHHHHHHHH
Confidence 0111333445555555532 4 56789999999988886 32 1 211100000001111 11111244555
Q ss_pred HHHHHHcC-----ChhHHHHHHH
Q 022932 246 AWLFRATN-----DVTYYNFIKS 263 (290)
Q Consensus 246 ~eLy~aTg-----d~~Yl~~a~~ 263 (290)
++|.+.|+ ++.|++.+++
T Consensus 290 l~L~~~~~~~~~~~~~Y~~~A~~ 312 (377)
T 2ahf_A 290 LEIASQLDESDPERQRFIDAAKT 312 (377)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCccccchHHHHHHHHH
Confidence 78888896 6789988766
No 27
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=74.51 E-value=8 Score=36.32 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccc
Q 022932 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (290)
Q Consensus 111 ~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~ 190 (290)
+.+.+++.++=.++|+++.+.+ +|..-..+ ++ ..++.+.-+ -|+ ..++-++..+++++
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~-~g~wp~~~------------~~--~~~~~~~wC----hG~---~Gi~~~l~~~~~~~ 305 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFP-SGNYPPCI------------GD--NRDLLVHWC----HGA---PGVIYMLIQAYKVF 305 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCT-TSCCCSBT------------TC--CCCCCCSSS----SSH---HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhcc-CCCCCCCC------------Cc--ccCcccccc----CCc---HHHHHHHHHHHHHc
Confidence 4578889999999999998875 44211111 11 111111111 132 34456677777887
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHH
Q 022932 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 191 ~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
. |+.+.+.+.+.++..|+... ...+ +.--.|. + =....-..||+.|+++.|++.+..
T Consensus 306 ~--~~~~~~~a~~~~~~~~~~g~-----~~~~-~~lChG~----a----G~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 306 R--EEKYLCDAYQCADVIWQYGL-----LKKG-YGLCHGS----A----GNAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp C--CHHHHHHHHHHHHHHHHHCS-----BTTC-SCSTTSH----H----HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHhcCc-----cCCC-CceecCh----H----HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 5 78887777777777776421 1111 1001121 1 136777899999999999998876
No 28
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=72.68 E-value=85 Score=31.76 Aligned_cols=164 Identities=16% Similarity=0.090 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecC-CCCcccc--cchhHHHHHHHHHHHHc
Q 022932 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDA-GDNVKFN--FPMAFTTTMLSWSTLEY 104 (290)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDA-GD~~Ky~--~~~a~s~~~L~w~~~e~ 104 (290)
..+...+.+++.|...+..-..+.+.....|+. + .|||-=. .|++ +. -.+++++..|.-.. ..
T Consensus 405 ~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~-----------~-~GGW~f~~~~~~-~pd~d~TA~vl~aL~~~~-~~ 470 (732)
T 1w6k_A 405 PEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQM-----------R-KGGFSFSTLDCG-WIVSDCTAEALKAVLLLQ-EK 470 (732)
T ss_dssp GGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCC-----------C-TTCCBSSCTTTC-CBCHHHHHHHHHHHHHHH-HH
T ss_pred hhhHHHHHHHHHHHHHhcccccCCcccccccCC-----------C-CCeecCCCCCCC-CCccccHHHHHHHHHHHh-cc
Confidence 358889999999996554322222111111211 1 4777322 1221 11 12344444332221 11
Q ss_pred ccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHH
Q 022932 105 GKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA 184 (290)
Q Consensus 105 ~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA 184 (290)
...+++. ...+.++=+++||+++|.+ ||++-.--.+.......+.+|.+.-. +. .+ +.+..+.|+.+.-+|+
T Consensus 471 ~~~~g~~--~~~~~i~~av~wLls~Q~~-DGgw~a~~~~~~~~~l~~i~~~e~fg-~~--~~--d~s~v~~Ta~vL~aL~ 542 (732)
T 1w6k_A 471 CPHVTEH--IPRERLCDAVAVLLNMRNP-DGGFATYETKRGGHLLELLNPSEVFG-DI--MI--DYTYVECTSAVMQALK 542 (732)
T ss_dssp CTTCCSC--CCHHHHHHHHHHHHTTCCT-TSCBCSSSCCCSCGGGGGGCCCSSCS-SC--SS--CCCBHHHHHHHHHHHH
T ss_pred cccccch--hhHHHHHHHHHHHHHhcCC-CCCEEeecCCCchHHHhhCcchhccc-cc--cc--CCCcchHHHHHHHHHH
Confidence 1112111 1234566788999999998 88762111110000001122322111 11 11 1234466777777777
Q ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHcc
Q 022932 185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 185 ~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~ 216 (290)
.....+.... ..+.-...+++-+|+.+++
T Consensus 543 ~~~~~~~~~~---~~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 543 YFHKRFPEHR---AAEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp HHHHHCTTSS---HHHHHHHHHHHHHHHHHHS
T ss_pred Hhcccccccc---chhhHHHHHHHHHHHHhhc
Confidence 6655443222 1223345567778888764
No 29
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=72.29 E-value=5.5 Score=36.82 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchH--HHHHHHHHHHHcCC
Q 022932 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDE--LLWGAAWLFRATND 254 (290)
Q Consensus 177 ~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De--~~wAA~eLy~aTgd 254 (290)
|.+..+|+.++++.+ |+ ++++.|++..++.....+.. . |.. .. .|+ +.++.++||+.|||
T Consensus 44 G~~~~gl~~~y~~tg--d~----~y~~~a~~~~~~~~~~~g~l--------~--~~~-~~-lDd~~~g~~ll~lY~~Tgd 105 (373)
T 1nc5_A 44 GVFLCGVLRLWEATG--EK----RYFEYAKAYADLLIDDNGNL--------L--FRR-DE-LDAIQAGLILFPLYEQTKD 105 (373)
T ss_dssp HHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHBCTTCCB--------C--CCT-TC-GGGTGGGGGHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHhCCCCcc--------c--CCC-CC-cchHHHHHHHHHHHHHhCC
Confidence 666778888888885 55 45666666666643211110 0 211 11 121 56788999999999
Q ss_pred hhHHHHHHH
Q 022932 255 VTYYNFIKS 263 (290)
Q Consensus 255 ~~Yl~~a~~ 263 (290)
++|++.+..
T Consensus 106 ~~yl~~a~~ 114 (373)
T 1nc5_A 106 ERYVKAAKR 114 (373)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999887
No 30
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=71.87 E-value=8.3 Score=36.12 Aligned_cols=88 Identities=17% Similarity=0.090 Sum_probs=49.9
Q ss_pred cchhHHHHHHHHHHHhcccccC-CCHHHHHHHHHHHHHHHHHHHHc---c----CCCCCCCCCCcCcccCCCCCc--chH
Q 022932 171 PGSDVAGETAAALAAASLVFRK-GDPRYASLLLRTAKNVLQFAMQY---R----GAYSDSLGSAVCPFYCSYSGY--KDE 240 (290)
Q Consensus 171 p~t~~~~~~AAalA~as~v~~~-~D~~yA~~~L~~A~~~~~~a~~~---~----~~y~~~~~~~~~~~Y~s~~~~--~De 240 (290)
||-+ .+.+=.|..++.+..+ .| ....++++.|+++++++.++ + |.+.....+ ....=.. ..+ .-|
T Consensus 246 pgh~--iE~~wlLl~~~~~~~~~~~-~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~-g~~~~~~-k~~w~~ae 320 (421)
T 2zbl_A 246 PGAW--IEWGRLMLHLHAALEARFE-TPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWD-GKPIVRE-RVRWPIVE 320 (421)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHTTC-CCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTT-SCBSCCC-EEHHHHHH
T ss_pred CChH--HHHHHHHHHHHHHcccccc-cchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCC-CCccCCC-cccHHHHH
Confidence 5554 3445556666666532 12 00116788888888888653 1 222211110 1100000 111 247
Q ss_pred HHHHHHHHHHHcCChhHHHHHHH
Q 022932 241 LLWGAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 241 ~~wAA~eLy~aTgd~~Yl~~a~~ 263 (290)
.+-|++.||+.||++.|++.+++
T Consensus 321 a~~all~l~~~tgd~~yl~~a~~ 343 (421)
T 2zbl_A 321 AMGTAYALYTLTDDSQYEEWYQK 343 (421)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 89999999999999999998766
No 31
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=69.04 E-value=6 Score=36.59 Aligned_cols=57 Identities=11% Similarity=0.109 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCcCccc-----CCCCCcchHHHHHH---HHHHHHcCChhHHHHHHH
Q 022932 199 SLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFY-----CSYSGYKDELLWGA---AWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 199 ~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y-----~s~~~~~De~~wAA---~eLy~aTgd~~Yl~~a~~ 263 (290)
.++++.|+++.+.+..+|.. + .++++ +. ..+.|.++.+. ++|++.|||++|++.+.+
T Consensus 106 ~~yl~~a~~la~~l~~~~r~-----~--~G~fw~~~~~~~-~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 106 ERYVKAAKRLRSLYGTLNRT-----S--EGGFWHKDGYPY-QMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHHGGGGTSCBC-----T--TSCBCSCTTSTT-EEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCC-----C--CCCeeccCCCCC-eEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 35677888888888666521 0 11222 22 34678887666 688899999999999876
No 32
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=67.71 E-value=11 Score=36.18 Aligned_cols=75 Identities=19% Similarity=0.104 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-c---------CCCCCCCCCCcCcccCCCCCcchH---HHH
Q 022932 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-R---------GAYSDSLGSAVCPFYCSYSGYKDE---LLW 243 (290)
Q Consensus 177 ~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~-~---------~~y~~~~~~~~~~~Y~s~~~~~De---~~w 243 (290)
|.+..+|+.++++.+ | +++++.|++..+|..++ | +....+.. .. +. .++.|| ++|
T Consensus 85 Gv~l~gl~~ay~~Tg--d----~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r---~~-~~--~~~LDD~g~~~~ 152 (445)
T 3k11_A 85 GVTYSALIAAAETTG--D----KRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLL---QI-LT--PHALDDAGAVCT 152 (445)
T ss_dssp HHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHH---HH-HS--CCSGGGTHHHHH
T ss_pred HHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHhccchhhhhhhccCCeecccc---cc-cC--CCcchhHHHHHH
Confidence 788899999999986 4 45556666666665532 1 11100000 00 11 233444 669
Q ss_pred HHHHHHHHcCChhHHHHHHH
Q 022932 244 GAAWLFRATNDVTYYNFIKS 263 (290)
Q Consensus 244 AA~eLy~aTgd~~Yl~~a~~ 263 (290)
+-.++|++|+++.|++.+.+
T Consensus 153 ~Li~lY~~T~d~~yl~~a~~ 172 (445)
T 3k11_A 153 AMIKLRLKDESLPVDGLIQN 172 (445)
T ss_dssp HHHHHHHHCTTCCCHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHH
Confidence 99999999999999999875
No 33
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=63.55 E-value=8.7 Score=37.26 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHc-----------CC---CCCCCcccccchhHHHHHHhh
Q 022932 240 ELLWGAAWLFRATNDVTYYNFIKSV-----------GD---DGGTDVFSWDNKFAGAHVLLA 287 (290)
Q Consensus 240 e~~wAA~eLy~aTgd~~Yl~~a~~~-----------~~---~~~~~~~~Wd~~~~~~~~lla 287 (290)
=++.|.+|||++|++..|++.|... |. +..--...=|+..+.+.+-|.
T Consensus 430 ~lL~allEL~~atq~~~~l~lA~~~g~nl~~~~~~~G~Fv~s~~h~y~r~Dd~~PlALL~L~ 491 (543)
T 2v8i_A 430 YALFALLDLYHASQVADYRKLAEKIGDNIIKIRYIDGFFMASSDRQYADVDAIEPYALLALE 491 (543)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSSTTBSCEETTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCceecCChhhhccccCCchhHHHHHHH
Confidence 3789999999999999999998762 11 122223468899998887764
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=63.49 E-value=42 Score=31.83 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceeEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhccc--
Q 022932 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV-- 189 (290)
Q Consensus 112 ~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v-- 189 (290)
-+...+-++=|++|||.||.+ +|+. .|. .|+... +.-.|+.+ =|+++.+.-.|+....-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~-nGGW-pqF-----------dpdn~~---y~~~IpFn---DDvt~rvle~L~~~~~~~~ 230 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFP-NGGW-PQV-----------WPLEGG---YHDAITYN---DDALVHVAELLSDIAAGRD 230 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCT-TSCC-BSB-----------SSCCCG---GGGSEECG---GGHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHHHHHHHccCC-CCCC-cCc-----------Cccccc---cccCCCcC---cHHHHHHHHHHHHHHhccC
Confidence 467899999999999999998 7641 111 122211 11112222 27888888888877652
Q ss_pred -ccCCCHHHHHHHHHHHHHHHHHHHHcc
Q 022932 190 -FRKGDPRYASLLLRTAKNVLQFAMQYR 216 (290)
Q Consensus 190 -~~~~D~~yA~~~L~~A~~~~~~a~~~~ 216 (290)
|.-.|+++..+...+.+++-+|+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 231 GFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333588888999999999999999874
No 35
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=59.05 E-value=46 Score=31.27 Aligned_cols=145 Identities=8% Similarity=-0.039 Sum_probs=77.4
Q ss_pred hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCCceeEeeC----CCCCCCCCCCCCCCCCCccceEE
Q 022932 90 MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVG----DPNADHKCWERPEDMDTVRSVYS 165 (290)
Q Consensus 90 ~a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg----~~~~Dh~~w~~Pe~~~~~R~~~~ 165 (290)
....+..|.|+...+ +-|+.+++++=-++++++-+..++|.+||.+- ++..-|. +..+.-.++..+.
T Consensus 175 ~~mni~~L~~A~~~~------gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~Wa-- 245 (397)
T 2zzr_A 175 CLLNIQLLFFAYEQT------GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWA-- 245 (397)
T ss_dssp HHHHTHHHHHHHHHH------CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBH--
T ss_pred hHhHHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhH--
Confidence 344566777776554 34789999999999999887653688888875 2111000 0001000001110
Q ss_pred cCCCCcchhHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-cC--C-CCCCCCCCcCcccCCCCCcchH-
Q 022932 166 VSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-RG--A-YSDSLGSAVCPFYCSYSGYKDE- 240 (290)
Q Consensus 166 ~~~~~p~t~~~~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~-~~--~-y~~~~~~~~~~~Y~s~~~~~De- 240 (290)
-.-+-++-+++..++.= .| .++|+.|+++.++..++ |. . |-+...+.. . ....|.
T Consensus 246 --------RGqAw~i~gl~~lY~~T--~d----~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~-----~-~~~~D~S 305 (397)
T 2zzr_A 246 --------RGQAWGIYGIPLSYRKM--KD----YQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDG-----S-GQPRDTS 305 (397)
T ss_dssp --------HHHHHHHHHHHHHHHHH--CC----HHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTT-----S-CCCBCHH
T ss_pred --------HHHHHHHHHHHHHHHHH--CC----HHHHHHHHHHHHHHHHhhHHhCCccccCCCCCC-----C-CCcCCCC
Confidence 01122333444444432 24 56789999999998887 32 1 211111000 0 123332
Q ss_pred ----HHHHHHHHHHHcCC---hh--HHHHHHH
Q 022932 241 ----LLWGAAWLFRATND---VT--YYNFIKS 263 (290)
Q Consensus 241 ----~~wAA~eLy~aTgd---~~--Yl~~a~~ 263 (290)
.+-+-++|.+.|++ .+ |++.+++
T Consensus 306 a~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 337 (397)
T 2zzr_A 306 ATATAVCGIHEMLKYLPEVDPDKETYKYAMHT 337 (397)
T ss_dssp HHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhhHHHHHHHHH
Confidence 33444677777887 77 9998866
No 36
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=45.95 E-value=18 Score=29.22 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=49.9
Q ss_pred HHHHhcccCCCCce--eEeeCCCCCCCCCCCCCCCCCCccceEEcCCC----CcchhHHHHHHHHHHHhcccccCCC---
Q 022932 124 DYLLKCATATPGKL--YVGVGDPNADHKCWERPEDMDTVRSVYSVSAS----NPGSDVAGETAAALAAASLVFRKGD--- 194 (290)
Q Consensus 124 D~llk~~~~~~g~~--y~~Vg~~~~Dh~~w~~Pe~~~~~R~~~~~~~~----~p~t~~~~~~AAalA~as~v~~~~D--- 194 (290)
.|+-|+-++=+|++ |.++.++. .+..|+.. .|....++.+ +-+.+++|.++-.++...+.++..+
T Consensus 40 ~~~~rl~~dY~GG~W~f~~lsnGg----~ym~P~~~--~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~~ 113 (142)
T 2kmg_A 40 AWMRRLCERYNGAYWHYYALSDGG----FYMAPDLA--GRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTDA 113 (142)
T ss_dssp HHHHHHCTTCCCCCCEEEEETTSC----EEEECCCC--SCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCccCCCCeeEEEEecCCe----eEecCCCC--CcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhcccccc
Confidence 45666654336765 56777642 23446542 2332222211 1245888888888888877776543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHccC
Q 022932 195 -PRYASLLLRTAKNVLQFAMQYRG 217 (290)
Q Consensus 195 -~~yA~~~L~~A~~~~~~a~~~~~ 217 (290)
+.+++++ -++.+|+.+||.
T Consensus 114 ~d~l~~~y----~~Lrdya~~HpE 133 (142)
T 2kmg_A 114 ADALIDRY----HFLRGFAAGHPE 133 (142)
T ss_dssp TTTTHHHH----HHHHHHGGGSTT
T ss_pred cHHHHHHH----HHHHHHHHhCcc
Confidence 4455544 789999999985
No 37
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=42.66 E-value=64 Score=29.53 Aligned_cols=71 Identities=11% Similarity=0.071 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCcCcccCCCCCcchHHHHHHHHHHHHcCChh
Q 022932 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVT 256 (290)
Q Consensus 177 ~~~AAalA~as~v~~~~D~~yA~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~~Y~s~~~~~De~~wAA~eLy~aTgd~~ 256 (290)
..++-++..+++++. |+.|.+.+.+.++..++. +....+ +.-.+| .. =.+.....|++.|+++.
T Consensus 282 ~Gi~~~l~~~~~~~~--d~~~~~~a~~~~~~~~~~-----~~~~~~-~~LCHG-------~a-G~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 282 PGISLLYLYGGLALD--NDYFVDKAEKILESAMQR-----KLGIDS-YMICHG-------YS-GLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH-----CTTCCS-CCTTTS-------HH-HHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHh-----ccCCCC-CCCCCh-------HH-HHHHHHHHHHHHhCCHH
Confidence 445667777777774 777766555555555543 111111 110112 11 23677788999999999
Q ss_pred HHHHHHH
Q 022932 257 YYNFIKS 263 (290)
Q Consensus 257 Yl~~a~~ 263 (290)
|++.+..
T Consensus 346 ~~~~a~~ 352 (409)
T 2g0d_A 346 FDSYMEE 352 (409)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9988765
No 38
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=38.47 E-value=89 Score=30.29 Aligned_cols=115 Identities=15% Similarity=0.072 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhcccCCCC--ceeE--eeCCCCCC--------------CCCCC
Q 022932 91 AFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPG--KLYV--GVGDPNAD--------------HKCWE 152 (290)
Q Consensus 91 a~s~~~L~w~~~e~~~~~~~~~~dlLde~kwg~D~llk~~~~~~g--~~y~--~Vg~~~~D--------------h~~w~ 152 (290)
++.+ .|+|.|.+......---+...+-++--++++...|.. ++ +.|. +..+...| ...|.
T Consensus 183 a~~L-~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~-~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S 260 (489)
T 2p0v_A 183 CYPI-RLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRK-DDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIAS 260 (489)
T ss_dssp HHHH-HHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCS-SCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCC
T ss_pred HHHH-HHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcc-cCCCCCceEeecCCCcccccccCCCCCccCCCCceeC
Confidence 4443 3666665543222111135667888899999998877 54 3332 21111100 12232
Q ss_pred --CCCCCCCccceEEcCCCCcchhHHHHHHHHHHHhcccccC--CCHHHHHHHHHHHHHHHHHHHHc
Q 022932 153 --RPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRK--GDPRYASLLLRTAKNVLQFAMQY 215 (290)
Q Consensus 153 --~Pe~~~~~R~~~~~~~~~p~t~~~~~~AAalA~as~v~~~--~D~~yA~~~L~~A~~~~~~a~~~ 215 (290)
+|+++. .|.-|.| | ..+.++++|-.++.+.+. .|+.+|++|.+.|+++-+-..++
T Consensus 261 ~fRPSDDa-~~yg~~i----p---SN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 261 AFRPSDDA-TTFQFLV----P---SNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp SBCTTSCB-CSSSEEH----H---HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcc-hhcCcch----H---HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 355544 3333443 2 235667788777777653 37889999999999998877664
No 39
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=36.71 E-value=1.6e+02 Score=26.97 Aligned_cols=97 Identities=23% Similarity=0.349 Sum_probs=53.0
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCcccccc---hhHHHHHHHHH
Q 022932 24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFP---MAFTTTMLSWS 100 (290)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~wr~~s~l~Dg~~~~~Dl~GGWyDAGD~~Ky~~~---~a~s~~~L~w~ 100 (290)
...+..|.+++..++.|.-...|-. ..|-.- -.| .++|++ +.+++ ++-.+-+|.-.
T Consensus 89 ~~~~~~y~~Ai~Rgl~wlL~mQ~~n------GGWpqF--dpd--------~~~Yl~-----~IpFnDDvtarvLelL~~~ 147 (332)
T 1gxm_A 89 SGGNTKYRDAVRKAANFLVNSQYST------GALPQF--YPL--------KGGYSD-----HATFNDNGMAYALTVLDFA 147 (332)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHCCTT------SCCBSE--ESC--------CSGGGG-----SEECGGGHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhccCCC------CCcccc--CCC--------cccccc-----cCCcchHHHHHHHHHHHHH
Confidence 3456899999999999987666642 112100 000 233332 22222 23333333211
Q ss_pred HHH---cc-ccc-CccHHHHHHHHHHHHHHHHhcccCCCCceeEeeC
Q 022932 101 TLE---YG-KKM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVG 142 (290)
Q Consensus 101 ~~e---~~-~~~-~~~~~dlLde~kwg~D~llk~~~~~~g~~y~~Vg 142 (290)
... |. +-| ....+....-++=|+|||+|.|.. +|+-+..=|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~-dggw~g~Wg 193 (332)
T 1gxm_A 148 ANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWK-QNGVLTVWC 193 (332)
T ss_dssp HTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCE-ETTEECCCC
T ss_pred HhccCCccccccccchhhhhHHHHHHHHHHHHHhhCc-cCCCcCeec
Confidence 110 11 112 223377788999999999999998 776554444
No 40
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase inhibitor; 1.62A {Escherichia coli}
Probab=30.25 E-value=94 Score=26.07 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=43.9
Q ss_pred HHHHhcccCCCCce--eEeeCCCCCCCCCCCCCCC--CCCccceEEcCCC----CcchhHHHHHHHHHHHhcccccCCCH
Q 022932 124 DYLLKCATATPGKL--YVGVGDPNADHKCWERPED--MDTVRSVYSVSAS----NPGSDVAGETAAALAAASLVFRKGDP 195 (290)
Q Consensus 124 D~llk~~~~~~g~~--y~~Vg~~~~Dh~~w~~Pe~--~~~~R~~~~~~~~----~p~t~~~~~~AAalA~as~v~~~~D~ 195 (290)
.|+-|+-++=+|++ |.++.++. .+..|+. ++..|.....+.+ +-+.+++|.++-.++.....++...+
T Consensus 79 ~~m~rlc~dY~GG~WeF~~LSNGG----~ymaP~~~~~~~e~~~l~n~~Ngf~~evSAdAAGIiaTL~alshla~~~e~d 154 (181)
T 2wj9_A 79 GWMDRLCENYCGGIWNLYTLNNGG----AFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECY 154 (181)
T ss_dssp HHHHHHC---C--CEEEEEETTSC----EEEEEC------CCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHhccccCCCeeEEEEecCCe----eEEecCCCCCCCceEEEEecCCCCCceECHHHHHHHHHHHHHHHHHcccchH
Confidence 45566644336766 55776642 2344543 1233443322211 12457777777777777655554333
Q ss_pred HHHHHHHHHHHHHHHHHHHccC
Q 022932 196 RYASLLLRTAKNVLQFAMQYRG 217 (290)
Q Consensus 196 ~yA~~~L~~A~~~~~~a~~~~~ 217 (290)
.+.++--++-+|+.+||.
T Consensus 155 ----~l~e~y~~LRdYA~~HpE 172 (181)
T 2wj9_A 155 ----AMTVHYYRLRDYALQHPE 172 (181)
T ss_dssp ----HHHHHHHHHHHHHHHSTT
T ss_pred ----HHHHHHHHHHHHHHhCcc
Confidence 444444578899999986
No 41
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=23.15 E-value=1.2e+02 Score=30.70 Aligned_cols=25 Identities=12% Similarity=0.179 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcee
Q 022932 113 QNARAAIRWATDYLLKCATATPGKLY 138 (290)
Q Consensus 113 ~dlLde~kwg~D~llk~~~~~~g~~y 138 (290)
+.+-..++=+++||+++|.+ ||.++
T Consensus 554 ~~~~~~i~rAv~yL~~~Q~~-DGsW~ 578 (732)
T 1w6k_A 554 AEIRETLTQGLEFCRRQQRA-DGSWE 578 (732)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-TSCCC
T ss_pred hhhHHHHHHHHHHHHhhcCC-CCCcc
Confidence 44556788899999999998 88654
Done!