Query 022934
Match_columns 290
No_of_seqs 196 out of 1212
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 07:13:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2E-61 4.3E-66 442.9 26.5 266 1-270 78-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 4.8E-60 1.1E-64 429.9 26.7 264 1-270 50-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 3.6E-51 7.7E-56 366.1 18.1 239 2-268 39-279 (281)
4 PRK15381 pathogenicity island 100.0 1.1E-46 2.4E-51 347.8 21.0 201 28-268 197-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 2.5E-45 5.5E-50 326.2 18.0 214 27-268 55-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 4.2E-33 9.1E-38 248.5 12.9 233 27-282 106-342 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 3.5E-23 7.5E-28 178.3 13.0 186 27-266 41-234 (234)
8 cd01836 FeeA_FeeB_like SGNH_hy 99.0 1.5E-09 3.1E-14 91.2 9.9 121 81-269 67-188 (191)
9 cd01834 SGNH_hydrolase_like_2 99.0 4.3E-09 9.3E-14 87.8 12.1 129 82-269 62-191 (191)
10 cd01824 Phospholipase_B_like P 99.0 3.9E-09 8.4E-14 94.7 12.3 183 28-269 83-282 (288)
11 cd01828 sialate_O-acetylestera 99.0 5.8E-09 1.3E-13 85.9 10.5 118 81-269 48-167 (169)
12 cd01841 NnaC_like NnaC (CMP-Ne 98.9 7.4E-09 1.6E-13 85.6 10.3 121 81-268 51-172 (174)
13 cd01833 XynB_like SGNH_hydrola 98.9 1.1E-08 2.4E-13 83.1 10.9 116 81-269 40-156 (157)
14 cd01839 SGNH_arylesterase_like 98.9 6.9E-09 1.5E-13 88.5 9.9 119 81-268 79-203 (208)
15 cd00229 SGNH_hydrolase SGNH_hy 98.9 1E-08 2.2E-13 83.3 10.3 122 80-268 64-186 (187)
16 cd04506 SGNH_hydrolase_YpmR_li 98.9 2.7E-08 5.9E-13 84.4 11.4 133 81-268 68-203 (204)
17 cd01823 SEST_like SEST_like. A 98.8 3.4E-08 7.3E-13 87.0 10.5 160 82-268 81-258 (259)
18 cd01832 SGNH_hydrolase_like_1 98.8 5.5E-08 1.2E-12 81.1 11.0 117 81-268 67-184 (185)
19 cd01829 SGNH_hydrolase_peri2 S 98.8 5.4E-08 1.2E-12 82.2 11.1 138 82-269 60-197 (200)
20 cd01838 Isoamyl_acetate_hydrol 98.7 1.1E-07 2.4E-12 79.8 11.1 133 81-268 63-197 (199)
21 cd01820 PAF_acetylesterase_lik 98.7 1.1E-07 2.3E-12 81.6 10.7 119 82-269 90-209 (214)
22 cd04501 SGNH_hydrolase_like_4 98.7 1.5E-07 3.2E-12 78.4 10.7 123 81-268 59-181 (183)
23 PF13472 Lipase_GDSL_2: GDSL-l 98.7 8.4E-08 1.8E-12 78.3 9.1 119 81-262 61-179 (179)
24 cd01827 sialate_O-acetylestera 98.7 1.8E-07 3.9E-12 78.2 11.0 119 81-269 67-186 (188)
25 cd01830 XynE_like SGNH_hydrola 98.7 1E-07 2.2E-12 81.1 9.2 127 83-268 76-202 (204)
26 cd04502 SGNH_hydrolase_like_7 98.7 2.2E-07 4.8E-12 76.6 10.9 119 81-268 50-169 (171)
27 cd01844 SGNH_hydrolase_like_6 98.6 8.2E-07 1.8E-11 73.8 13.4 118 81-268 57-175 (177)
28 cd01821 Rhamnogalacturan_acety 98.6 1.3E-07 2.9E-12 79.9 8.0 131 81-268 65-196 (198)
29 cd01822 Lysophospholipase_L1_l 98.6 7.5E-07 1.6E-11 73.5 12.3 112 81-269 64-175 (177)
30 PRK10528 multifunctional acyl- 98.6 2.8E-07 6.1E-12 77.7 9.5 111 81-269 71-182 (191)
31 cd01835 SGNH_hydrolase_like_3 98.5 7.8E-07 1.7E-11 74.8 8.6 123 81-268 69-191 (193)
32 cd01825 SGNH_hydrolase_peri1 S 98.4 9.5E-07 2.1E-11 73.7 8.5 127 82-269 57-184 (189)
33 cd01840 SGNH_hydrolase_yrhL_li 98.3 2.7E-06 5.8E-11 68.9 8.6 23 246-268 126-148 (150)
34 cd01826 acyloxyacyl_hydrolase_ 98.3 1E-05 2.2E-10 72.1 12.1 148 83-268 124-304 (305)
35 cd01831 Endoglucanase_E_like E 98.2 9.2E-06 2E-10 66.9 9.5 22 247-268 145-166 (169)
36 KOG3035 Isoamyl acetate-hydrol 98.0 4.5E-05 9.8E-10 64.2 9.3 139 81-269 68-207 (245)
37 COG2755 TesA Lysophospholipase 97.4 0.0019 4E-08 55.1 10.7 24 247-270 185-208 (216)
38 PF14606 Lipase_GDSL_3: GDSL-l 97.0 0.0049 1.1E-07 51.2 8.4 116 81-268 59-175 (178)
39 KOG3670 Phospholipase [Lipid t 96.7 0.037 8.1E-07 51.0 12.7 77 51-142 160-237 (397)
40 COG2845 Uncharacterized protei 95.6 0.058 1.3E-06 48.5 7.9 135 81-268 177-315 (354)
41 cd01842 SGNH_hydrolase_like_5 93.3 1.1 2.3E-05 37.2 9.7 127 83-268 52-180 (183)
42 PF08885 GSCFA: GSCFA family; 88.4 3.1 6.7E-05 36.6 8.4 139 79-265 99-250 (251)
43 PLN02757 sirohydrochlorine fer 80.1 4.9 0.00011 32.6 5.5 63 123-207 60-125 (154)
44 PF02633 Creatininase: Creatin 72.0 18 0.00039 31.3 7.3 84 86-205 61-144 (237)
45 cd04823 ALAD_PBGS_aspartate_ri 67.6 14 0.0003 33.5 5.6 60 119-192 52-111 (320)
46 cd00384 ALAD_PBGS Porphobilino 67.3 21 0.00046 32.2 6.8 58 119-192 49-106 (314)
47 cd03416 CbiX_SirB_N Sirohydroc 65.9 11 0.00024 27.6 4.2 51 125-197 48-98 (101)
48 PRK13384 delta-aminolevulinic 65.2 21 0.00046 32.3 6.3 58 119-192 59-116 (322)
49 cd04824 eu_ALAD_PBGS_cysteine_ 64.2 13 0.00029 33.6 4.9 60 119-192 49-109 (320)
50 PRK09283 delta-aminolevulinic 63.8 26 0.00056 31.9 6.6 63 119-198 57-119 (323)
51 PF00490 ALAD: Delta-aminolevu 62.4 14 0.0003 33.6 4.7 64 120-198 56-119 (324)
52 COG3240 Phospholipase/lecithin 60.9 4.8 0.0001 37.2 1.6 70 79-154 96-165 (370)
53 PF04914 DltD_C: DltD C-termin 58.9 24 0.00051 27.8 4.9 73 177-268 38-125 (130)
54 PF13839 PC-Esterase: GDSL/SGN 58.8 1.2E+02 0.0025 26.0 10.8 147 81-268 100-259 (263)
55 PF01903 CbiX: CbiX; InterPro 53.5 5.5 0.00012 29.5 0.6 52 125-198 41-92 (105)
56 COG0113 HemB Delta-aminolevuli 52.8 34 0.00075 30.9 5.4 60 118-191 58-117 (330)
57 KOG2794 Delta-aminolevulinic a 50.5 29 0.00063 30.8 4.5 94 80-198 38-131 (340)
58 cd03414 CbiX_SirB_C Sirohydroc 48.6 53 0.0012 24.6 5.4 51 123-197 47-97 (117)
59 COG3581 Uncharacterized protei 47.5 28 0.0006 32.6 4.2 47 129-199 327-373 (420)
60 PF08029 HisG_C: HisG, C-termi 47.4 18 0.00039 25.5 2.4 21 123-143 52-72 (75)
61 PF02896 PEP-utilizers_C: PEP- 45.5 40 0.00086 30.4 4.8 19 82-100 196-214 (293)
62 TIGR03455 HisG_C-term ATP phos 44.5 29 0.00063 25.9 3.2 23 121-143 74-96 (100)
63 PRK13660 hypothetical protein; 41.4 1.2E+02 0.0027 25.2 6.8 27 116-142 24-50 (182)
64 PF06908 DUF1273: Protein of u 39.9 50 0.0011 27.4 4.3 27 116-142 24-50 (177)
65 KOG4079 Putative mitochondrial 39.4 14 0.0003 29.2 0.8 16 132-147 42-57 (169)
66 cd00419 Ferrochelatase_C Ferro 36.3 95 0.0021 24.4 5.2 35 124-171 80-114 (135)
67 PRK09121 5-methyltetrahydropte 35.5 1.2E+02 0.0027 27.8 6.6 36 111-147 146-181 (339)
68 PF08331 DUF1730: Domain of un 34.7 85 0.0018 22.0 4.3 60 133-192 9-71 (78)
69 COG1903 CbiD Cobalamin biosynt 34.5 3.5E+02 0.0076 25.2 9.2 90 34-145 167-258 (367)
70 cd03411 Ferrochelatase_N Ferro 29.2 63 0.0014 26.0 3.2 24 123-146 101-124 (159)
71 PF06812 ImpA-rel_N: ImpA-rela 28.3 21 0.00046 23.9 0.2 8 248-255 53-60 (62)
72 PRK06520 5-methyltetrahydropte 28.1 97 0.0021 28.8 4.6 36 111-147 160-195 (368)
73 PRK13717 conjugal transfer pro 27.8 91 0.002 24.4 3.6 26 163-188 70-95 (128)
74 COG3605 PtsP Signal transducti 27.4 62 0.0013 32.1 3.2 21 80-100 616-636 (756)
75 cd03413 CbiK_C Anaerobic cobal 26.7 74 0.0016 23.7 2.9 18 124-141 45-62 (103)
76 TIGR01091 upp uracil phosphori 26.3 1.7E+02 0.0036 24.8 5.4 50 120-200 135-184 (207)
77 PRK06233 hypothetical protein; 26.2 1.1E+02 0.0024 28.5 4.6 36 111-147 161-196 (372)
78 COG1402 Uncharacterized protei 25.8 95 0.0021 27.3 3.9 25 118-142 87-111 (250)
79 cd04236 AAK_NAGS-Urea AAK_NAGS 24.7 1.9E+02 0.0042 25.7 5.7 45 81-145 34-78 (271)
80 cd03412 CbiK_N Anaerobic cobal 24.7 84 0.0018 24.3 3.0 51 121-196 56-106 (127)
81 cd03409 Chelatase_Class_II Cla 23.6 1.1E+02 0.0025 21.9 3.5 23 124-146 48-70 (101)
82 cd03311 CIMS_C_terminal_like C 22.6 2.7E+02 0.0058 25.2 6.4 36 111-147 145-180 (332)
83 PRK00129 upp uracil phosphorib 22.1 2.5E+02 0.0053 23.7 5.7 49 120-199 137-185 (209)
84 PF12872 OST-HTH: OST-HTH/LOTU 22.0 1.9E+02 0.0042 19.4 4.2 27 192-218 23-51 (74)
85 PRK07807 inosine 5-monophospha 21.5 1.6E+02 0.0035 28.6 4.8 60 121-207 226-287 (479)
86 cd03415 CbiX_CbiC Archaeal sir 21.1 1.1E+02 0.0023 23.8 2.9 19 123-141 46-64 (125)
87 TIGR02744 TrbI_Ftype type-F co 21.1 1.5E+02 0.0032 22.7 3.6 26 163-188 57-82 (112)
88 PLN02825 amino-acid N-acetyltr 20.4 3E+02 0.0064 27.0 6.4 58 57-145 2-59 (515)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2e-61 Score=442.88 Aligned_cols=266 Identities=32% Similarity=0.649 Sum_probs=230.3
Q ss_pred CccccccCC-CCCCCCCCCCCCCCCCCCCcceecccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHh
Q 022934 1 MVSGQRIGQ-SEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQL 79 (290)
Q Consensus 1 ~~ia~~lgl-~~~~~pyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~ 79 (290)
+|||+.||+ |. +|||+++..++.++.+|+|||+|||++++.+.. ....++|..||++|..+++++....|...+.+.
T Consensus 78 D~iA~~lGl~p~-~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~ 155 (351)
T PLN03156 78 DFISEAFGLKPA-IPAYLDPSYNISDFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEI 155 (351)
T ss_pred hhHHHHhCCCCC-CCCCcCcccCchhhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 589999999 65 999998755567899999999999998776542 223578999999999998888877776566677
Q ss_pred hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcC-C
Q 022934 80 VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-S 158 (290)
Q Consensus 80 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~-~ 158 (290)
.+++||+||||+|||+..++..+ ......+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... .
T Consensus 156 ~~~sL~~i~iG~NDy~~~~~~~~--~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~ 233 (351)
T PLN03156 156 ISEALYLISIGTNDFLENYYTFP--GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMG 233 (351)
T ss_pred HhcCeEEEEecchhHHHHhhccc--cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCC
Confidence 89999999999999986554321 11223457889999999999999999999999999999999999999765421 1
Q ss_pred CCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCC-
Q 022934 159 NGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALS- 237 (290)
Q Consensus 159 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~- 237 (290)
..+|.+.+|.+++.||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++|||.|.++....|++..
T Consensus 234 ~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~ 313 (351)
T PLN03156 234 GSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNP 313 (351)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCC
Confidence 3579999999999999999999999999999999999999999999999999999999999999988888777899655
Q ss_pred CCCCCCCCceeeCCCChhHHHHHHHHHHHHcCC
Q 022934 238 NLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGS 270 (290)
Q Consensus 238 ~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~~ 270 (290)
.+|++|++|+|||++|||+++|+++|+.++++.
T Consensus 314 ~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 314 FTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred CccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999863
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=4.8e-60 Score=429.85 Aligned_cols=264 Identities=39% Similarity=0.823 Sum_probs=229.5
Q ss_pred CccccccCCCCCCCCCCCCCCCCCCCCCcceecccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHhh
Q 022934 1 MVSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLV 80 (290)
Q Consensus 1 ~~ia~~lgl~~~~~pyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~ 80 (290)
+|||+.||+|+.+|||++... +.++.+|+|||+|||++.+.+.. ...+++|..||++|+++++++...+|+.++.+..
T Consensus 50 d~la~~lgl~~~~p~~~~~~~-~~~~~~G~NfA~gGA~~~~~~~~-~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~ 127 (315)
T cd01837 50 DFIAEALGLPLLPPPYLSPNG-SSDFLTGVNFASGGAGILDSTGF-LGSVISLSVQLEYFKEYKERLRALVGEEAAADIL 127 (315)
T ss_pred hhhhhhccCCCCCCCccCccc-cchhhccceecccCCccccCCcc-eeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 589999999975677887532 25789999999999999876643 2346899999999999998888888877777889
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcC-CC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-SN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~-~~ 159 (290)
+++||+||||+|||+..+.... ....+.+++++.+++++.++|++||++|||||+|+|+||+||+|..+.... ..
T Consensus 128 ~~sL~~i~iG~ND~~~~~~~~~----~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~ 203 (315)
T cd01837 128 SKSLFLISIGSNDYLNNYFANP----TRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDG 203 (315)
T ss_pred hCCEEEEEecccccHHHHhcCc----cccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCC
Confidence 9999999999999987663211 102356789999999999999999999999999999999999999887532 13
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCC-CC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTAL-SN 238 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~-~~ 238 (290)
.+|.+.+|++++.||++|++++++|++++|+++|+++|+|.+++++++||++|||+++.++||+.|.++....|... ..
T Consensus 204 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~ 283 (315)
T cd01837 204 GGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGST 283 (315)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999998866666678753 57
Q ss_pred CCCCCCCceeeCCCChhHHHHHHHHHHHHcCC
Q 022934 239 LCPNRQLYAFWDPFHPSEKANRLIVEQIFSGS 270 (290)
Q Consensus 239 ~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~~ 270 (290)
+|++|++|+|||++|||+++|++||+.+++|.
T Consensus 284 ~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 284 VCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred cCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 89999999999999999999999999999873
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=3.6e-51 Score=366.06 Aligned_cols=239 Identities=21% Similarity=0.276 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCcceecccCcccccCCCCC--cccccCHHHHHHHHHHHHHHHHHhhChHHHHHh
Q 022934 2 VSGQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQ--FVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQL 79 (290)
Q Consensus 2 ~ia~~lgl~~~~~pyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~--~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~ 79 (290)
++++.+|+++ + +++ ...+..+|+|||+|||++.+.+... ....++|.+||++|++.+. ..
T Consensus 39 ~~~~~~~~~~-~---~~~--~~~~~~~G~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~ 100 (281)
T cd01847 39 SLGVAEGYGL-T---TGT--ATPTTPGGTNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GF 100 (281)
T ss_pred HHHHHHHcCC-C---cCc--CcccCCCCceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CC
Confidence 5788889875 2 332 2456889999999999998755421 0235799999999987642 23
Q ss_pred hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCC
Q 022934 80 VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 80 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.+++||+||+|+|||+..+.... .......+..++++.+++.+..+|++||++|||+|+|+++||+||+|..+...
T Consensus 101 ~~~sL~~i~iG~ND~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~--- 176 (281)
T cd01847 101 DPNALYTVWIGGNDLIAALAALT-TATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP--- 176 (281)
T ss_pred CCCeEEEEecChhHHHHHHhhcc-ccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---
Confidence 68999999999999997664321 11111234678999999999999999999999999999999999999987642
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
..|.+.+|.++..||.+|+.++++|+.+ +|+++|+|.++.++++||++|||++++++||+.+.......|. ..+
T Consensus 177 ~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~~~~~~~~~--~~~ 250 (281)
T cd01847 177 AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTSAAGSGAAT--LVT 250 (281)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCCcccccccc--ccC
Confidence 3688999999999999999999988643 8999999999999999999999999999999965322222232 357
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
|++|++|+|||++||||++|+++|+.+++
T Consensus 251 c~~~~~y~fwD~~HpTe~~~~~ia~~~~~ 279 (281)
T cd01847 251 AAAQSTYLFADDVHPTPAGHKLIAQYALS 279 (281)
T ss_pred CCCccceeeccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999886
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.1e-46 Score=347.77 Aligned_cols=201 Identities=18% Similarity=0.231 Sum_probs=171.1
Q ss_pred CcceecccCcccccCCCCCc--ccccCHHHHHHHHHHHHHHHHHhhChHHHHHhhhcceeEEEecchhhhhhhhcCccCc
Q 022934 28 IGANFASAGIGILNDTGIQF--VNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSA 105 (290)
Q Consensus 28 ~g~NfA~gGA~~~~~~~~~~--~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 105 (290)
+|+|||+|||++........ ...++|.+||++|+. .+++||+||+|+|||+. +
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~~-~------- 251 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYMT-L------- 251 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHHH-h-------
Confidence 79999999999873211100 124689999998553 16899999999999973 2
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHH
Q 022934 106 RSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGIN 185 (290)
Q Consensus 106 ~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~ 185 (290)
..++++.+++++..+|++||++|||||+|+|+||+||+|..+.. ...+.+|.++..||++|+.+|++|+
T Consensus 252 ------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----~~~~~~N~~a~~fN~~L~~~L~~L~ 320 (408)
T PRK15381 252 ------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----DEKRKLKDESIAHNALLKTNVEELK 320 (408)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 12357789999999999999999999999999999999998742 2357899999999999999999999
Q ss_pred HHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHH
Q 022934 186 RKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQ 265 (290)
Q Consensus 186 ~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~ 265 (290)
+++|+++|+++|+|+++.++++||++|||+++.. ||+.|..+....|.+...+|. +|+|||.+|||+++|+++|+.
T Consensus 321 ~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA~~ 396 (408)
T PRK15381 321 EKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFAIM 396 (408)
T ss_pred HhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999876 999886555567888777894 999999999999999999998
Q ss_pred HHc
Q 022934 266 IFS 268 (290)
Q Consensus 266 ~~~ 268 (290)
+-+
T Consensus 397 ~~~ 399 (408)
T PRK15381 397 LES 399 (408)
T ss_pred HHH
Confidence 764
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=2.5e-45 Score=326.15 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=182.9
Q ss_pred CCcceecccCcccccCCCCC-cccccCHHHHHHHHHHHHHHHHHhhChHHHHHhhhcceeEEEecchhhhhhhhcCccCc
Q 022934 27 LIGANFASAGIGILNDTGIQ-FVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSA 105 (290)
Q Consensus 27 ~~g~NfA~gGA~~~~~~~~~-~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 105 (290)
..|+|||+|||++.+..... .....+|..||++|++..+. +..+++||+||+|+||+...+..
T Consensus 55 ~~~~N~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~----- 118 (270)
T cd01846 55 KQGYNYAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL----- 118 (270)
T ss_pred CCcceeEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc-----
Confidence 48999999999987654321 13357999999999987531 34688999999999999875421
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHH
Q 022934 106 RSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGIN 185 (290)
Q Consensus 106 ~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~ 185 (290)
......+++++++++.++|++|+++|+|+|+|+++||++|+|..+..... ..+.++.+++.||++|++++++|+
T Consensus 119 ---~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~---~~~~~~~~~~~~N~~L~~~l~~l~ 192 (270)
T cd01846 119 ---PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA---VAARATALTAAYNAKLAEKLAELK 192 (270)
T ss_pred ---cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc---cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11334568889999999999999999999999999999999998865321 126899999999999999999999
Q ss_pred HHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHH
Q 022934 186 RKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQ 265 (290)
Q Consensus 186 ~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~ 265 (290)
+++|+++|+++|+|.++.++++||+.|||+++..+||+.+. |.+....|++|++|+|||++|||+++|++||+.
T Consensus 193 ~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~~------~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~ 266 (270)
T cd01846 193 AQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDYVY------SYSPREACANPDKYLFWDEVHPTTAVHQLIAEE 266 (270)
T ss_pred HhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCCCc------cccccCCCCCccceEEecCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999998541 766678999999999999999999999999999
Q ss_pred HHc
Q 022934 266 IFS 268 (290)
Q Consensus 266 ~~~ 268 (290)
+++
T Consensus 267 ~~~ 269 (270)
T cd01846 267 VAA 269 (270)
T ss_pred HHh
Confidence 876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=4.2e-33 Score=248.51 Aligned_cols=233 Identities=21% Similarity=0.272 Sum_probs=176.9
Q ss_pred CCcceecccCcccccCC--CCCcccccCHHHHHHHHHHHHHHHHHhhCh-HHHHHhhhcceeEEEecchhhhhhhhcCcc
Q 022934 27 LIGANFASAGIGILNDT--GIQFVNIIRMFRQLDYFAEYQRRVSAVIGA-QQARQLVNRALVLITVGGNDFVNNYYLVPY 103 (290)
Q Consensus 27 ~~g~NfA~gGA~~~~~~--~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~-~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 103 (290)
..|.|||+|||++.... ........++.+|+.+|+...... .++. ..........|+.||.|+||++..-...
T Consensus 106 a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggand~~~~~~~~-- 181 (370)
T COG3240 106 AGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGANDYLALPMLK-- 181 (370)
T ss_pred cccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcchhhhcccccc--
Confidence 68999999999976554 111134578999999999865320 0010 0112345788999999999997642111
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHH
Q 022934 104 SARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQG 183 (290)
Q Consensus 104 ~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~ 183 (290)
....+.+.......+...|++|.++|||+|+|+++|+++.+|...... .-.+.+..++..||..|...|+.
T Consensus 182 -----a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~----~~~~~a~~~t~~~Na~L~~~L~~ 252 (370)
T COG3240 182 -----AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG----TEAIQASQATIAFNASLTSQLEQ 252 (370)
T ss_pred -----hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 111223333445679999999999999999999999999999987531 22337889999999999999998
Q ss_pred HHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC-CCCCCceeeCCCChhHHHHHHH
Q 022934 184 INRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC-PNRQLYAFWDPFHPSEKANRLI 262 (290)
Q Consensus 184 l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C-~~p~~y~fwD~~HPT~~~h~~i 262 (290)
+ +.+|+.+|++.++++++.||++|||+|++..||....-++ .|.+..+.| ..|++|+|||.+|||+++|++|
T Consensus 253 ~-----g~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~li 325 (370)
T COG3240 253 L-----GGNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHPTTAVHHLI 325 (370)
T ss_pred h-----cCcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCCchHHHHHH
Confidence 7 4899999999999999999999999999999998653333 577655555 4577899999999999999999
Q ss_pred HHHHHcCCCCccCCCChhHh
Q 022934 263 VEQIFSGSTNYMTPMNLSTV 282 (290)
Q Consensus 263 a~~~~~~~~~~~~P~~~~~l 282 (290)
|+++++.. ..|+.+.-|
T Consensus 326 Aeyila~l---~ap~~~~~l 342 (370)
T COG3240 326 AEYILARL---AAPFSLTIL 342 (370)
T ss_pred HHHHHHHH---hCcchhhHH
Confidence 99999863 567755544
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.90 E-value=3.5e-23 Score=178.33 Aligned_cols=186 Identities=24% Similarity=0.412 Sum_probs=135.7
Q ss_pred CCcceecccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHhhhcceeEEEecchhhhhhhhcCccCcc
Q 022934 27 LIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSAR 106 (290)
Q Consensus 27 ~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~ 106 (290)
..+.|+|.+|+++.............+..|+...... ....+.+|++||+|+||++...
T Consensus 41 ~~~~n~a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~~-------- 99 (234)
T PF00657_consen 41 VDVSNYAISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNNR-------- 99 (234)
T ss_dssp EEEEEEE-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSCC--------
T ss_pred CCeeccccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhhc--------
Confidence 5678999999996433211000111122333222111 2345789999999999986511
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHhCCc-----eEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHH
Q 022934 107 SRQFTLPNYVKYIISEYRKLLMRLYELGAR-----RVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQML 181 (290)
Q Consensus 107 ~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr-----~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l 181 (290)
........++.+++.+.+.|++|+..|+| +++++++||++|.|...........|.+.++..+..||.+|++.+
T Consensus 100 -~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~ 178 (234)
T PF00657_consen 100 -DSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVA 178 (234)
T ss_dssp -SCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred -ccchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHh
Confidence 11244566788999999999999999999 999999999999988776544345799999999999999999999
Q ss_pred HHHHHHcC-CCceeeccchHHHHHh--hhCccCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeCCCChhHHH
Q 022934 182 QGINRKIG-QTVFIAANTQQTHMDF--VSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKA 258 (290)
Q Consensus 182 ~~l~~~~~-~~~i~~~D~~~~~~~i--i~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~ 258 (290)
++++++++ +.++.++|++..+.+. +.+|.. ++|+|||++|||+++
T Consensus 179 ~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~--------------------------------~~~~~~D~~Hpt~~g 226 (234)
T PF00657_consen 179 AQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN--------------------------------DKYMFWDGVHPTEKG 226 (234)
T ss_dssp HHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH--------------------------------HHCBBSSSSSB-HHH
T ss_pred hhcccccccCCceEEEEHHHHHHHhhhccCccc--------------------------------ceeccCCCcCCCHHH
Confidence 99987765 8899999999999998 666543 468999999999999
Q ss_pred HHHHHHHH
Q 022934 259 NRLIVEQI 266 (290)
Q Consensus 259 h~~ia~~~ 266 (290)
|++||+++
T Consensus 227 ~~~iA~~i 234 (234)
T PF00657_consen 227 HKIIAEYI 234 (234)
T ss_dssp HHHHHHHH
T ss_pred HHHHHcCC
Confidence 99999975
No 8
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.04 E-value=1.5e-09 Score=91.25 Aligned_cols=121 Identities=22% Similarity=0.236 Sum_probs=80.1
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHH-hCCceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYE-LGARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-++++|.+|+||+.... + .++..+++.+.++++.+ ....+|++.++||+++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~~------------~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHLT------------S----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----- 125 (191)
T ss_pred CCCEEEEEecccCcCCCC------------C----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----
Confidence 447899999999985311 2 23456677777777776 3456799999999887653211
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
......++....+|+.+++..++ + .++.++|++..+.
T Consensus 126 -~~~~~~~~~~~~~n~~~~~~a~~----~--~~~~~id~~~~~~------------------------------------ 162 (191)
T cd01836 126 -PLRWLLGRRARLLNRALERLASE----A--PRVTLLPATGPLF------------------------------------ 162 (191)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhc----C--CCeEEEecCCccc------------------------------------
Confidence 11223445566777766665543 2 2567778765431
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
.+++..|++||+++||+++|+.+.+.
T Consensus 163 ----~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ----PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ----hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 12344699999999999999998763
No 9
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.02 E-value=4.3e-09 Score=87.85 Aligned_cols=129 Identities=15% Similarity=0.153 Sum_probs=85.2
Q ss_pred cceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHH-HhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 82 RALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLY-ELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~-~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
-.+++|++|.||+..... .... .+...+++...|+.|. .....+|++.+.+|....+.. .
T Consensus 62 ~d~v~l~~G~ND~~~~~~--------~~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~-------~ 122 (191)
T cd01834 62 PDVVSIMFGINDSFRGFD--------DPVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP-------L 122 (191)
T ss_pred CCEEEEEeecchHhhccc--------cccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC-------C
Confidence 479999999999975321 0112 2345667777778775 334456777776654332110 0
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
.-....+.....||+.+++..++ .++.++|++..+.+....+
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------- 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------- 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC-------------------------------
Confidence 01244566778888888776543 2588999999987644321
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
+.+++++|++||+++||++||+.+.++
T Consensus 165 --~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 --GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred --CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 134578999999999999999998763
No 10
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=99.02 E-value=3.9e-09 Score=94.70 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=102.5
Q ss_pred CcceecccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHhh-hcceeEEEecchhhhhhhhcCccCcc
Q 022934 28 IGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLV-NRALVLITVGGNDFVNNYYLVPYSAR 106 (290)
Q Consensus 28 ~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~-~~sL~~i~iG~ND~~~~~~~~~~~~~ 106 (290)
.+.|+|+.|+++ .+|..|++...+..++- .. -... .=.|++|+||+||+..... .+
T Consensus 83 ~~~N~av~Ga~s-----------~dL~~qa~~lv~r~~~~------~~-i~~~~dwklVtI~IG~ND~c~~~~-~~---- 139 (288)
T cd01824 83 SGFNVAEPGAKS-----------EDLPQQARLLVRRMKKD------PR-VDFKNDWKLITIFIGGNDLCSLCE-DA---- 139 (288)
T ss_pred cceeecccCcch-----------hhHHHHHHHHHHHHhhc------cc-cccccCCcEEEEEecchhHhhhcc-cc----
Confidence 466888888774 36778887654432210 00 0111 2257899999999975221 10
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHhCCc-eEEEecCCCCCCchhhhhhcC-----CCCCcc----------HHhhHHH
Q 022934 107 SRQFTLPNYVKYIISEYRKLLMRLYELGAR-RVLVTGTGPLGCVPAELALRG-----SNGGCS----------AELQRAT 170 (290)
Q Consensus 107 ~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr-~~~v~~lpplg~~P~~~~~~~-----~~~~c~----------~~~n~~~ 170 (290)
.... .....+++.+.++.|.+..-| .|+++++|++..++....... ....|. +...+..
T Consensus 140 -~~~~----~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~ 214 (288)
T cd01824 140 -NPGS----PQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFY 214 (288)
T ss_pred -cCcC----HHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHH
Confidence 1112 344567788888888887754 577777888765554321100 012242 2455667
Q ss_pred HHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCCCCCCceeeC
Q 022934 171 SLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWD 250 (290)
Q Consensus 171 ~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~fwD 250 (290)
..|++.+++.++.-+-+..+..+++ ..++.+.+..+..- .. -.+++-||
T Consensus 215 ~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~~~~~---------------------------g~-d~~~~~~D 263 (288)
T cd01824 215 KEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSLPPLPD---------------------------GP-DLSFFSPD 263 (288)
T ss_pred HHHHHHHHHHHhcccccccCccEEe---eCchhccccccccC---------------------------CC-cchhcCCC
Confidence 7777777766654221122333433 22222222110000 00 12578899
Q ss_pred CCChhHHHHHHHHHHHHcC
Q 022934 251 PFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 251 ~~HPT~~~h~~ia~~~~~~ 269 (290)
.+||+++||.++|+.+|+.
T Consensus 264 ~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 264 CFHFSQRGHAIAANALWNN 282 (288)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999975
No 11
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.96 E-value=5.8e-09 Score=85.88 Aligned_cols=118 Identities=18% Similarity=0.191 Sum_probs=79.3
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHH--hCCceEEEecCCCCCCchhhhhhcCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYE--LGARRVLVTGTGPLGCVPAELALRGS 158 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~~v~~lpplg~~P~~~~~~~~ 158 (290)
.-.+++|.+|.||..... ++ +...+++.+.|+.+.+ .++ +|++.++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~~------------~~----~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQGT------------SD----EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCCC------------CH----HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc-------
Confidence 348999999999984311 22 3456667777777776 455 58888888865 10
Q ss_pred CCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCC
Q 022934 159 NGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSN 238 (290)
Q Consensus 159 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~ 238 (290)
....+..+..||+.+++..++ .++.++|++..+.+- -|
T Consensus 102 ----~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~------~~------------------------- 139 (169)
T cd01828 102 ----KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTNA------DG------------------------- 139 (169)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcCC------CC-------------------------
Confidence 112235568889888876652 266788998765220 00
Q ss_pred CCCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 239 LCPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 239 ~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
+..+++.+|++||+++||+++|+.+.+-
T Consensus 140 ---~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 ---DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred ---CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 1124567899999999999999998763
No 12
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.94 E-value=7.4e-09 Score=85.60 Aligned_cols=121 Identities=15% Similarity=0.159 Sum_probs=81.6
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYEL-GARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-.+++|++|+||..... + .+...+++...++++.+. ...+++++++||..-.+.
T Consensus 51 ~pd~v~i~~G~ND~~~~~------------~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKEV------------S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------- 106 (174)
T ss_pred CCCEEEEEeccccCCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------
Confidence 347889999999974311 2 234567777778887765 356788999888643221
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
+....+.....||+.+++..++. ++.++|++..+.+-. +
T Consensus 107 --~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~~~------------------~-------------- 145 (174)
T cd01841 107 --IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVDEF------------------G-------------- 145 (174)
T ss_pred --cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcCCC------------------C--------------
Confidence 11223456788998888765432 488999998764210 0
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+..+.+..|++||+++||++||+.+.+
T Consensus 146 --~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 --NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred --CccccccCCCcccCHHHHHHHHHHHHh
Confidence 011245689999999999999998864
No 13
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.93 E-value=1.1e-08 Score=83.11 Aligned_cols=116 Identities=14% Similarity=0.251 Sum_probs=82.6
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGA-RRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
+-++++|.+|+||..... + ++...+++.+.|+++.+.+. .+|++.++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~~------------~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLNR------------D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccCC------------C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 448999999999985421 2 23456777777888877633 246666666643211
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
.+.....||+.+++.+++.+.. +..+.++|++..+.+
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------- 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------- 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC-----------------------------------
Confidence 1466889999999999886543 567899998765421
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
+++.+|++||+++||+.||+.+++.
T Consensus 132 -----~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 -----ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred -----cccccCCCCCchHHHHHHHHHHHhh
Confidence 2366999999999999999998864
No 14
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.92 E-value=6.9e-09 Score=88.48 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=76.4
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHh------CCceEEEecCCCCCCchhhhh
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYEL------GARRVLVTGTGPLGCVPAELA 154 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~------GAr~~~v~~lpplg~~P~~~~ 154 (290)
.-++++|++|+||+...+. .++ +...+++.+.++.+.+. +..+++++..||+...+...
T Consensus 79 ~pd~vii~lGtND~~~~~~----------~~~----~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~- 143 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYFN----------LSA----AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL- 143 (208)
T ss_pred CCCEEEEeccccccccccC----------CCH----HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-
Confidence 4589999999999864221 122 23445555666666554 46678888888872221111
Q ss_pred hcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccC
Q 022934 155 LRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCT 234 (290)
Q Consensus 155 ~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~ 234 (290)
..+....+.....||+.+++..++. ++.++|++.++..
T Consensus 144 -----~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~------------------------------ 181 (208)
T cd01839 144 -----AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST------------------------------ 181 (208)
T ss_pred -----hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc------------------------------
Confidence 1123334667778888877766542 4677887654310
Q ss_pred CCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 235 ALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 235 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
...|++|||++||++||+.+++
T Consensus 182 ------------~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 182 ------------SPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred ------------CCCCccCcCHHHHHHHHHHHHH
Confidence 2379999999999999999876
No 15
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.91 E-value=1e-08 Score=83.33 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=82.2
Q ss_pred hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHH-hCCceEEEecCCCCCCchhhhhhcCC
Q 022934 80 VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYE-LGARRVLVTGTGPLGCVPAELALRGS 158 (290)
Q Consensus 80 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~~v~~lpplg~~P~~~~~~~~ 158 (290)
..-.++++.+|+||+.... ..+ .....+.+...++.+.+ ....+|++++.||....|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------~~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------DTS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc----------ccC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------
Confidence 4678999999999986421 001 12334455555566654 4556789999998777664
Q ss_pred CCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCC
Q 022934 159 NGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSN 238 (290)
Q Consensus 159 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~ 238 (290)
..+.....+|..+++..+..... ..+.++|++..+...
T Consensus 123 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~--------------------------------- 160 (187)
T cd00229 123 ------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE--------------------------------- 160 (187)
T ss_pred ------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC---------------------------------
Confidence 12234577777777766654221 357788887765432
Q ss_pred CCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 239 LCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 239 ~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+..+++||++|||++||+.+|+.+++
T Consensus 161 ----~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ----DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ----ccccccCCCCCCchhhHHHHHHHHhc
Confidence 24568899999999999999999875
No 16
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.86 E-value=2.7e-08 Score=84.41 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=82.8
Q ss_pred hcceeEEEecchhhhhhhhcCccCccc-ccCChHHHHHHHHHHHHHHHHHHHHhCCc-eEEEecCC-CCCCchhhhhhcC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARS-RQFTLPNYVKYIISEYRKLLMRLYELGAR-RVLVTGTG-PLGCVPAELALRG 157 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~-~~~~~~~~v~~~v~~i~~~v~~L~~~GAr-~~~v~~lp-plg~~P~~~~~~~ 157 (290)
.-.+++|.+|+||+........ .. .......-.+....++.+.|+++.+.+.+ +|+|++++ |.... .
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~~-----~-- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNF---LSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYVY-----F-- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccccc-----c--
Confidence 4578999999999976442100 00 00011122345667788888888876543 57777753 32110 0
Q ss_pred CCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCC
Q 022934 158 SNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALS 237 (290)
Q Consensus 158 ~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~ 237 (290)
.-....+..+..||+.+++..++ ..++.++|++..+..--
T Consensus 138 ---~~~~~~~~~~~~~n~~~~~~a~~------~~~v~~vd~~~~~~~~~------------------------------- 177 (204)
T cd04506 138 ---PNITEINDIVNDWNEASQKLASQ------YKNAYFVPIFDLFSDGQ------------------------------- 177 (204)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHh------CCCeEEEehHHhhcCCc-------------------------------
Confidence 01123567788899887776542 12588999988764210
Q ss_pred CCCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 238 NLCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 238 ~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+...+..|++||+++||++||+.+++
T Consensus 178 -----~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 -----NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred -----ccccccccCcCCCHHHHHHHHHHHHh
Confidence 12245679999999999999999875
No 17
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.81 E-value=3.4e-08 Score=87.03 Aligned_cols=160 Identities=19% Similarity=0.169 Sum_probs=85.6
Q ss_pred cceeEEEecchhhhhhhhcCc-cCc----------ccccCChHHHHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCc
Q 022934 82 RALVLITVGGNDFVNNYYLVP-YSA----------RSRQFTLPNYVKYIISEYRKLLMRLYEL-GARRVLVTGTGPLGCV 149 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~~~-~~~----------~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~~v~~lpplg~~ 149 (290)
-.|++|++|+||+........ ... ...........+...+++...|++|.+. .-.+|++++.|++--.
T Consensus 81 ~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~ 160 (259)
T cd01823 81 TDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPP 160 (259)
T ss_pred CCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccC
Confidence 589999999999854321100 000 0000111233445566777777777754 3346899998875311
Q ss_pred ----hhhhhhcC--CCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCcccccccccc
Q 022934 150 ----PAELALRG--SNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCG 223 (290)
Q Consensus 150 ----P~~~~~~~--~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~ 223 (290)
|....... .........++....+|..+++..++ +.+.++.|+|++..|.. ...|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~-------------~~~~~~ 223 (259)
T cd01823 161 DGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG-------------HRACSP 223 (259)
T ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC-------------CccccC
Confidence 00000000 00012234566677777776665543 33356889999886542 112222
Q ss_pred ccCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 224 QGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 224 ~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
...-.. . .+......-|++||+++||+.||+.+.+
T Consensus 224 ~~~~~~-------~---~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 224 DPWSRS-------V---LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCcccc-------c---cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 110000 0 0112334579999999999999998875
No 18
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.80 E-value=5.5e-08 Score=81.07 Aligned_cols=117 Identities=17% Similarity=0.183 Sum_probs=76.8
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCC-CCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPL-GCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lppl-g~~P~~~~~~~~~ 159 (290)
.-.+++|.+|.||.... ..++ ++..+++...|+++...++ +++++++||. +..|..
T Consensus 67 ~~d~vii~~G~ND~~~~-----------~~~~----~~~~~~~~~~i~~i~~~~~-~vil~~~~~~~~~~~~~------- 123 (185)
T cd01832 67 RPDLVTLLAGGNDILRP-----------GTDP----DTYRADLEEAVRRLRAAGA-RVVVFTIPDPAVLEPFR------- 123 (185)
T ss_pred CCCEEEEeccccccccC-----------CCCH----HHHHHHHHHHHHHHHhCCC-EEEEecCCCccccchhH-------
Confidence 34789999999997531 0122 3445666777777776677 4888899887 332221
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
...+.....+|+.|++..++ .++.++|++..+. +.
T Consensus 124 ----~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~------------------~~---------------- 158 (185)
T cd01832 124 ----RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE------------------FA---------------- 158 (185)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc------------------cC----------------
Confidence 12334577888887776653 2578888865431 00
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
...++.-|++||+++||++||+.+++
T Consensus 159 ---~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 ---DPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ---CccccccCCCCCChhHHHHHHHHHhh
Confidence 01223459999999999999999875
No 19
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.80 E-value=5.4e-08 Score=82.20 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=82.6
Q ss_pred cceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCC
Q 022934 82 RALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGG 161 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~ 161 (290)
=++++|.+|+||+....... .. .....+++.+...+++...++.+.+.|++ +++++.||+.-
T Consensus 60 pd~vii~~G~ND~~~~~~~~---~~-~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------- 121 (200)
T cd01829 60 PDVVVVFLGANDRQDIRDGD---GY-LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------- 121 (200)
T ss_pred CCEEEEEecCCCCccccCCC---ce-eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC-------------
Confidence 37889999999985422110 00 01112344555667777777777766775 77888887641
Q ss_pred ccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCC
Q 022934 162 CSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCP 241 (290)
Q Consensus 162 c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~ 241 (290)
...+.....+|..+++..++ ..+.++|++..+.+ ...|+.... .....
T Consensus 122 --~~~~~~~~~~~~~~~~~a~~-------~~~~~id~~~~~~~-------------~~~~~~~~~----------~~~~~ 169 (200)
T cd01829 122 --PKLSADMVYLNSLYREEVAK-------AGGEFVDVWDGFVD-------------ENGRFTYSG----------TDVNG 169 (200)
T ss_pred --hhHhHHHHHHHHHHHHHHHH-------cCCEEEEhhHhhcC-------------CCCCeeeec----------cCCCC
Confidence 11234456777776665543 24789999877632 112321100 00111
Q ss_pred CCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 242 NRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 242 ~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
++..++..|++|||+++|++||+.+.+-
T Consensus 170 ~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 170 KKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred cEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 2334556799999999999999998863
No 20
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.74 E-value=1.1e-07 Score=79.84 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=81.2
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHH--hCCceEEEecCCCCCCchhhhhhcCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYE--LGARRVLVTGTGPLGCVPAELALRGS 158 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~~v~~lpplg~~P~~~~~~~~ 158 (290)
.-.+++|++|+||...... ....+. +...+++...|+++.+ .|+ ++++++.||.+-.........
T Consensus 63 ~pd~vii~~G~ND~~~~~~-------~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~- 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQ-------PQHVPL----DEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED- 129 (199)
T ss_pred CceEEEEEecCccccCCCC-------CCcccH----HHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-
Confidence 5679999999999864221 000122 3345556666666665 455 588888888653221110000
Q ss_pred CCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCC
Q 022934 159 NGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSN 238 (290)
Q Consensus 159 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~ 238 (290)
........+.....||+.+++..++. .+.++|++..+...-.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~~~~------------------------------- 171 (199)
T cd01838 130 GGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQEEAG------------------------------- 171 (199)
T ss_pred ccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHhccC-------------------------------
Confidence 01123345667788887776655432 4778999887653110
Q ss_pred CCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 239 LCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 239 ~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
..+.++.|++||+++||+++|+.+.+
T Consensus 172 ----~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 ----WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred ----chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 01235579999999999999999875
No 21
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.72 E-value=1.1e-07 Score=81.61 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=77.0
Q ss_pred cceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCchhhhhhcCCCC
Q 022934 82 RALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELG-ARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
-.+++|++|+||+.... + .+...+++...|+++.+.. ..+|++++++|.+..|.
T Consensus 90 pd~VvI~~G~ND~~~~~------------~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~~--------- 144 (214)
T cd01820 90 PKVVVLLIGTNNIGHTT------------T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNPN--------- 144 (214)
T ss_pred CCEEEEEecccccCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCch---------
Confidence 47889999999974311 2 2345677777888887663 34688888888654221
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
........+|+.+++...+ ..++.++|++..+.+- .|
T Consensus 145 ----~~~~~~~~~n~~l~~~~~~------~~~v~~vd~~~~~~~~------------------~g--------------- 181 (214)
T cd01820 145 ----PLRERNAQVNRLLAVRYDG------LPNVTFLDIDKGFVQS------------------DG--------------- 181 (214)
T ss_pred ----hHHHHHHHHHHHHHHHhcC------CCCEEEEeCchhhccc------------------CC---------------
Confidence 1223456677766554321 2368899988765310 00
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
...+.++.|++||+++||++||+.+.+.
T Consensus 182 -~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 182 -TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred -CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0112245899999999999999998863
No 22
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.71 E-value=1.5e-07 Score=78.44 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=80.3
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
.-++++|.+|.||..... +. .+..+.+...|+.+.+.|++ ++++..||....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~~------------~~----~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVNT------------SL----EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------- 114 (183)
T ss_pred CCCEEEEEeccCccccCC------------CH----HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------
Confidence 347889999999985311 22 33456677777777778885 5566666654333211
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
+....+.....||..+++..++ .++.++|++..+.+.-.
T Consensus 115 -~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~--------------------------------- 153 (183)
T cd04501 115 -QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN--------------------------------- 153 (183)
T ss_pred -hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc---------------------------------
Confidence 1123355677888877766543 25889999987654211
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
......+..|++||+++||+++|+.+.+
T Consensus 154 ~~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 154 VGLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 0112345679999999999999998875
No 23
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.70 E-value=8.4e-08 Score=78.27 Aligned_cols=119 Identities=22% Similarity=0.274 Sum_probs=77.9
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
.-.+++|.+|+||.... - ......+...+.+...++.+...+ +++++.+||..-.+...
T Consensus 61 ~~d~vvi~~G~ND~~~~-~-----------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~------- 119 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG-D-----------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP------- 119 (179)
T ss_dssp TCSEEEEE--HHHHCTC-T-----------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-------
T ss_pred CCCEEEEEccccccccc-c-----------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-------
Confidence 44699999999998652 0 122335667788888888887778 88889888865433221
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
+..........+|+.+++..++ + .+.++|+...+.+ +.
T Consensus 120 -~~~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~----~~------------------------------ 157 (179)
T PF13472_consen 120 -KQDYLNRRIDRYNQAIRELAKK----Y---GVPFIDLFDAFDD----HD------------------------------ 157 (179)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHH----C---TEEEEEHHHHHBT----TT------------------------------
T ss_pred -cchhhhhhHHHHHHHHHHHHHH----c---CCEEEECHHHHcc----cc------------------------------
Confidence 1233456677788877765542 2 7889999888542 10
Q ss_pred CCCCCceeeCCCChhHHHHHHH
Q 022934 241 PNRQLYAFWDPFHPSEKANRLI 262 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~i 262 (290)
.....+++.|++|||++||++|
T Consensus 158 ~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp SCBHTCTBTTSSSBBHHHHHHH
T ss_pred ccchhhcCCCCCCcCHHHhCcC
Confidence 0112457799999999999986
No 24
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.70 E-value=1.8e-07 Score=78.22 Aligned_cols=119 Identities=14% Similarity=0.175 Sum_probs=71.5
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGA-RRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-++++|.+|+||..... .... +....++...|+++.+.+. .++++.+.||......
T Consensus 67 ~pd~Vii~~G~ND~~~~~----------~~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~-------- 124 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN----------WKYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG-------- 124 (188)
T ss_pred CCCEEEEEcccCCCCCCC----------CccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC--------
Confidence 347999999999975311 0012 2334566777777766654 4677777766432110
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
.. ...+.....+|+.+++..+ + ..+.++|++..+.. +
T Consensus 125 -~~-~~~~~~~~~~~~~~~~~a~----~---~~~~~vD~~~~~~~---~------------------------------- 161 (188)
T cd01827 125 -GF-INDNIIKKEIQPMIDKIAK----K---LNLKLIDLHTPLKG---K------------------------------- 161 (188)
T ss_pred -Cc-cchHHHHHHHHHHHHHHHH----H---cCCcEEEccccccC---C-------------------------------
Confidence 11 1123344566666655543 2 25677888764311 0
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
+ .++-|++||+++||++||+.+.+.
T Consensus 162 ---~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 ---P--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ---c--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 0 134699999999999999998863
No 25
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.68 E-value=1e-07 Score=81.09 Aligned_cols=127 Identities=18% Similarity=0.201 Sum_probs=72.0
Q ss_pred ceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCc
Q 022934 83 ALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGC 162 (290)
Q Consensus 83 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c 162 (290)
.+++|++|+||+....... . ....+ ++...+++...++++.+.|+ ++++.++||..-.+..
T Consensus 76 ~~vii~~G~ND~~~~~~~~---~-~~~~~----~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~~~~~---------- 136 (204)
T cd01830 76 RTVIILEGVNDIGASGTDF---A-AAPVT----AEELIAGYRQLIRRAHARGI-KVIGATITPFEGSGYY---------- 136 (204)
T ss_pred CEEEEeccccccccccccc---c-cCCCC----HHHHHHHHHHHHHHHHHCCC-eEEEecCCCCCCCCCC----------
Confidence 5789999999986432110 0 00112 34567778888888888887 5777888885432211
Q ss_pred cHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCCCC
Q 022934 163 SAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPN 242 (290)
Q Consensus 163 ~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~ 242 (290)
.... +..++++.+.+.+. .... .++|++..+.+... + + .-
T Consensus 137 ~~~~----~~~~~~~n~~~~~~----~~~~-~~vD~~~~~~~~~~-~---------------~---------------~~ 176 (204)
T cd01830 137 TPAR----EATRQAVNEWIRTS----GAFD-AVVDFDAALRDPAD-P---------------S---------------RL 176 (204)
T ss_pred CHHH----HHHHHHHHHHHHcc----CCCC-eeeEhHHhhcCCCC-c---------------h---------------hc
Confidence 1111 22233333333221 1112 35898876543110 0 0 00
Q ss_pred CCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 243 RQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 243 p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
..+|+.+|++||+++||++||+.+..
T Consensus 177 ~~~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 177 RPAYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred ccccCCCCCCCCCHHHHHHHHHhcCC
Confidence 12456689999999999999998753
No 26
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.68 E-value=2.2e-07 Score=76.59 Aligned_cols=119 Identities=17% Similarity=0.224 Sum_probs=75.9
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGA-RRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-.+++|.+|+||+.... + .+...+++.+.++++.+.+. .+++++.+||. |..
T Consensus 50 ~p~~vvi~~G~ND~~~~~------------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~~------- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASGR------------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PAR------- 103 (171)
T ss_pred CCCEEEEEEecCcccCCC------------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Ccc-------
Confidence 346899999999974211 2 34457778888888887753 35777776542 110
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
...+.....+|+.+++..++ ...+.++|++..+.+.-.+
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~~------~~~v~~vD~~~~~~~~~~~------------------------------- 142 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAET------RPNLTYIDVASPMLDADGK------------------------------- 142 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHhc------CCCeEEEECcHHHhCCCCC-------------------------------
Confidence 11223456777776665531 2367899998876431100
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
...+++..|++||+++||+++|+.+..
T Consensus 143 --~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 --PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred --cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012456689999999999999998864
No 27
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.64 E-value=8.2e-07 Score=73.75 Aligned_cols=118 Identities=13% Similarity=0.101 Sum_probs=72.0
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGA-RRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-.+++|.+|+||.... ....+++...+++|.+.+. .+|++++.||. |.....
T Consensus 57 ~pd~vii~~G~ND~~~~-------------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~---- 110 (177)
T cd01844 57 PADLYIIDCGPNIVGAE-------------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT---- 110 (177)
T ss_pred CCCEEEEEeccCCCccH-------------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC----
Confidence 34789999999996210 0456778888888887764 46777776664 221111
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
.......++....+| +.++.++.+ ...++.++|.+.++..
T Consensus 111 ~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~v~~id~~~~~~~----------------------------------- 150 (177)
T cd01844 111 PGRGKLTLAVRRALR----EAFEKLRAD-GVPNLYYLDGEELLGP----------------------------------- 150 (177)
T ss_pred cchhHHHHHHHHHHH----HHHHHHHhc-CCCCEEEecchhhcCC-----------------------------------
Confidence 011223333344444 444444332 2347889997654310
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+.-++.|++|||++||++||+.+..
T Consensus 151 ----~~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 ----DGEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred ----CCCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0114579999999999999998875
No 28
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.61 E-value=1.3e-07 Score=79.86 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=81.0
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
.-+|++|.+|.||...... ....+ ++...+++.+.|+++.+.|++ +++++.||... . .
T Consensus 65 ~pdlVii~~G~ND~~~~~~-------~~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~----~--- 122 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDP-------EYTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---F----D--- 122 (198)
T ss_pred CCCEEEEECCCCCCCCCCC-------CCCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---c----C---
Confidence 3489999999999754210 00112 344567777888888888986 55555544211 1 0
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
.+. ..+.....||+.+++..++. .+.++|++..+.+..+.-.. ...
T Consensus 123 ~~~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~---~~~----------------------- 168 (198)
T cd01821 123 EGG-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGP---EKS----------------------- 168 (198)
T ss_pred CCC-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhCh---HhH-----------------------
Confidence 011 23334567777777666543 57789999998876542100 000
Q ss_pred CCCC-CceeeCCCChhHHHHHHHHHHHHc
Q 022934 241 PNRQ-LYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 241 ~~p~-~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
.+. .++..|++||+++||++||+.+++
T Consensus 169 -~~~~~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 169 -KKYFPEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred -HhhCcCCCCCCCCCCHHHHHHHHHHHHh
Confidence 000 245679999999999999999876
No 29
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.61 E-value=7.5e-07 Score=73.47 Aligned_cols=112 Identities=19% Similarity=0.287 Sum_probs=66.3
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
.-.+++|.+|+||..... ++ +...+++.+.++++.+.|++ +++.++|. |...
T Consensus 64 ~pd~v~i~~G~ND~~~~~------------~~----~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~------- 115 (177)
T cd01822 64 KPDLVILELGGNDGLRGI------------PP----DQTRANLRQMIETAQARGAP-VLLVGMQA----PPNY------- 115 (177)
T ss_pred CCCEEEEeccCcccccCC------------CH----HHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCcc-------
Confidence 347999999999974311 22 34566677777888778876 55555431 1110
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
+ ......||+.+++.. +++ ++.++|.+. ..+..+
T Consensus 116 ~-----~~~~~~~~~~~~~~a----~~~---~~~~~d~~~--~~~~~~-------------------------------- 149 (177)
T cd01822 116 G-----PRYTRRFAAIYPELA----EEY---GVPLVPFFL--EGVAGD-------------------------------- 149 (177)
T ss_pred c-----hHHHHHHHHHHHHHH----HHc---CCcEechHH--hhhhhC--------------------------------
Confidence 0 012355665555544 332 355666531 111110
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
.+++.-|++||+++||++||+.+.+.
T Consensus 150 ---~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 150 ---PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred ---hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 12355799999999999999998763
No 30
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.60 E-value=2.8e-07 Score=77.73 Aligned_cols=111 Identities=15% Similarity=0.214 Sum_probs=68.6
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEe-cCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVT-GTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~-~lpplg~~P~~~~~~~~~ 159 (290)
.-++++|.+|+||.... .+ .+...+++...++.+.+.|++.+++. .+|+ ..
T Consensus 71 ~pd~Vii~~GtND~~~~------------~~----~~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~------- 122 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG------------FP----PQQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NY------- 122 (191)
T ss_pred CCCEEEEEeccCcCccC------------CC----HHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----cc-------
Confidence 34789999999997321 12 23456777788888888898877663 2332 11
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
...++..+.+.++++.+++ ++.++|.+.... .
T Consensus 123 ----------~~~~~~~~~~~~~~~a~~~---~v~~id~~~~~~--~--------------------------------- 154 (191)
T PRK10528 123 ----------GRRYNEAFSAIYPKLAKEF---DIPLLPFFMEEV--Y--------------------------------- 154 (191)
T ss_pred ----------cHHHHHHHHHHHHHHHHHh---CCCccHHHHHhh--c---------------------------------
Confidence 0122333444555555554 356677642110 0
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
...+++..|++||+++||+.||+.+.+.
T Consensus 155 --~~~~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 155 --LKPQWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred --cCHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0123466799999999999999998874
No 31
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.46 E-value=7.8e-07 Score=74.76 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=72.1
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
.-++++|.+|.||....... ....+.++| .+.+...++++ +.++ +++++++||..-..
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~------~~~~~~~~~----~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRK------RPQLSARAF----LFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCc------ccccCHHHH----HHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 44899999999998653210 001122333 22333333332 2344 57888877754211
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
....+.....+|+.+++..++ .++.++|++..+.+. +.
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~~------------------------------ 164 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---PQ------------------------------ 164 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---cH------------------------------
Confidence 112345667788777776543 257789998876541 10
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
...+++..|++||+++||++||+.+..
T Consensus 165 -~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 -WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred -HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 001233369999999999999998864
No 32
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.44 E-value=9.5e-07 Score=73.68 Aligned_cols=127 Identities=11% Similarity=0.049 Sum_probs=76.7
Q ss_pred cceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCchhhhhhcCCCC
Q 022934 82 RALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYEL-GARRVLVTGTGPLGCVPAELALRGSNG 160 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~~v~~lpplg~~P~~~~~~~~~~ 160 (290)
-++++|.+|+||..... .+ .+...+++...|+++.+. ...+|++++.||....+..
T Consensus 57 pd~Vii~~G~ND~~~~~-----------~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~-------- 113 (189)
T cd01825 57 PDLVILSYGTNEAFNKQ-----------LN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA-------- 113 (189)
T ss_pred CCEEEEECCCcccccCC-----------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC--------
Confidence 37899999999964311 12 234567777777777764 4456888887764322210
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
+....+.....+|..+++..+ +. .+.++|++..+.+. |+. ..
T Consensus 114 -~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~~----------------~~~--------------~~ 155 (189)
T cd01825 114 -GRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGGE----------------GGI--------------WQ 155 (189)
T ss_pred -CCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCCc----------------chh--------------hH
Confidence 111122335666666655543 22 37889998876321 110 00
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
.....++..|++|||++||+.||+.+.+-
T Consensus 156 ~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 156 WAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred hhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 01123466899999999999999998763
No 33
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.34 E-value=2.7e-06 Score=68.86 Aligned_cols=23 Identities=22% Similarity=0.381 Sum_probs=20.3
Q ss_pred ceeeCCCChhHHHHHHHHHHHHc
Q 022934 246 YAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 246 y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
++..|++||+++||+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 45579999999999999999875
No 34
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.30 E-value=1e-05 Score=72.15 Aligned_cols=148 Identities=23% Similarity=0.181 Sum_probs=82.5
Q ss_pred ceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCc--eEEEecCCCCCCc---------hh
Q 022934 83 ALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGAR--RVLVTGTGPLGCV---------PA 151 (290)
Q Consensus 83 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr--~~~v~~lpplg~~---------P~ 151 (290)
.+++|++|+||.....-. .....++ ++--+++.+.++.|.+..-+ +|++.++|++..+ |.
T Consensus 124 ~lVtI~lGgND~C~g~~d-----~~~~tp~----eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hpl 194 (305)
T cd01826 124 ALVIYSMIGNDVCNGPND-----TINHTTP----EEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPI 194 (305)
T ss_pred eEEEEEeccchhhcCCCc-----cccCcCH----HHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccc
Confidence 788889999998653110 0111233 34467778888888888644 8999999995222 00
Q ss_pred hh-----h---hcC-----CCCCccH------HhhHHHHHhhHHHHHHHHHHHH--HcCCCceeeccchHHHHHhhhCcc
Q 022934 152 EL-----A---LRG-----SNGGCSA------ELQRATSLYNPQLEQMLQGINR--KIGQTVFIAANTQQTHMDFVSNPQ 210 (290)
Q Consensus 152 ~~-----~---~~~-----~~~~c~~------~~n~~~~~~N~~L~~~l~~l~~--~~~~~~i~~~D~~~~~~~ii~nP~ 210 (290)
.. + .+. .-..|.. ..-.+...+=++|..+..++.+ ++....+++.|+. +..++....
T Consensus 195 g~~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~ 272 (305)
T cd01826 195 GQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWI 272 (305)
T ss_pred hhcccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHH
Confidence 00 0 000 0013432 1223344444444444444433 2345677777762 333333222
Q ss_pred CCCccccccccccccCCCCccccCCCCCCCCCCCCcee-eCCCChhHHHHHHHHHHHHc
Q 022934 211 AYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAF-WDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 211 ~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~y~f-wD~~HPT~~~h~~ia~~~~~ 268 (290)
+.|- .+-+++. -|++||++.||.++|+.+++
T Consensus 273 ~~g~---------------------------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 273 AFGG---------------------------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred hcCC---------------------------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 2110 1334555 79999999999999999985
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.22 E-value=9.2e-06 Score=66.88 Aligned_cols=22 Identities=14% Similarity=0.335 Sum_probs=19.9
Q ss_pred eeeCCCChhHHHHHHHHHHHHc
Q 022934 247 AFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 247 ~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
.+.|++||++++|++||+.+++
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHH
Confidence 3579999999999999999876
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.01 E-value=4.5e-05 Score=64.20 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=87.6
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELG-ARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.-++++|++|+||-...- + +........++| ++++...++-|...- -.+|++++-||+...-.........
T Consensus 68 ~p~lvtVffGaNDs~l~~---~-~~~~~hvPl~Ey----~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~~ 139 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLPE---P-SSLGQHVPLEEY----KDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEPY 139 (245)
T ss_pred CceEEEEEecCccccCCC---C-CCCCCccCHHHH----HHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccch
Confidence 347899999999964311 1 111112344555 555666666665554 3457777777776543333221100
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
..-.++.|+.+..|++.+.+...++ ++..+|..+.+.+.-
T Consensus 140 ~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~--------------------------------- 179 (245)
T KOG3035|consen 140 VLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD--------------------------------- 179 (245)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc---------------------------------
Confidence 1123468999999999988877654 566788876665411
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFSG 269 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 269 (290)
|-.+-.|||++|.|..|++++.+.++..
T Consensus 180 --dw~~~~ltDGLHlS~~G~~ivf~Ei~kv 207 (245)
T KOG3035|consen 180 --DWQTSCLTDGLHLSPKGNKIVFDEILKV 207 (245)
T ss_pred --cHHHHHhccceeeccccchhhHHHHHHH
Confidence 1122368999999999999999999863
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0019 Score=55.10 Aligned_cols=24 Identities=21% Similarity=0.225 Sum_probs=21.0
Q ss_pred eeeCCCChhHHHHHHHHHHHHcCC
Q 022934 247 AFWDPFHPSEKANRLIVEQIFSGS 270 (290)
Q Consensus 247 ~fwD~~HPT~~~h~~ia~~~~~~~ 270 (290)
..+|++||+.++|+.+|+.+.+..
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHHH
Confidence 349999999999999999998753
No 38
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.97 E-value=0.0049 Score=51.17 Aligned_cols=116 Identities=11% Similarity=0.164 Sum_probs=50.4
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCchhhhhhcCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELG-ARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
+.++|++..|.| + +++ .+...+...|++|.+.- -.-|++....+ +...
T Consensus 59 ~a~~~~ld~~~N-----~------------~~~----~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~-------- 107 (178)
T PF14606_consen 59 DADLIVLDCGPN-----M------------SPE----EFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG-------- 107 (178)
T ss_dssp --SEEEEEESHH-----C------------CTT----THHHHHHHHHHHHHTT-SSS-EEEEE------TTT--------
T ss_pred CCCEEEEEeecC-----C------------CHH----HHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc--------
Confidence 449999999999 2 111 23455666777776553 45677665322 1111
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCC
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNL 239 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~ 239 (290)
............+|+.+++.+++++++ ..-+++|+|-..++-+
T Consensus 108 -~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~----------------------------------- 150 (178)
T PF14606_consen 108 -YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD----------------------------------- 150 (178)
T ss_dssp -TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-------------------------------------
T ss_pred -ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc-----------------------------------
Confidence 122223345789999999999999764 4568888887654311
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 240 CPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 240 C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+.-..-|++|||+.||..+|+.+..
T Consensus 151 ----d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 151 ----DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp -----------------------------
T ss_pred ----ccccccccccccccccccccccccc
Confidence 0113479999999999999998764
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.71 E-value=0.037 Score=51.01 Aligned_cols=77 Identities=19% Similarity=0.117 Sum_probs=45.9
Q ss_pred cCHHHHHHHHHHHHHHHHHhhChHHHHHh-hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHH
Q 022934 51 IRMFRQLDYFAEYQRRVSAVIGAQQARQL-VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMR 129 (290)
Q Consensus 51 ~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~-~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~ 129 (290)
-+|..|-+...+..++ ..+- .. ..=-|+.||||+||+-..-.. + .+.+..++.-..+|.++++.
T Consensus 160 ~Dlp~QAr~Lv~rik~---~~~i----~~~~dWKLi~IfIG~ND~c~~c~~-~-------~~~~~~~~~~~~~i~~Al~~ 224 (397)
T KOG3670|consen 160 EDLPDQARDLVSRIKK---DKEI----NMKNDWKLITIFIGTNDLCAYCEG-P-------ETPPSPVDQHKRNIRKALEI 224 (397)
T ss_pred hhhHHHHHHHHHHHHh---ccCc----ccccceEEEEEEeccchhhhhccC-C-------CCCCCchhHHHHHHHHHHHH
Confidence 4677777765544332 2221 01 112789999999998764321 0 12223344456678889999
Q ss_pred HHHhCCceEEEec
Q 022934 130 LYELGARRVLVTG 142 (290)
Q Consensus 130 L~~~GAr~~~v~~ 142 (290)
|.+.=-|.+|++-
T Consensus 225 L~~nvPR~iV~lv 237 (397)
T KOG3670|consen 225 LRDNVPRTIVSLV 237 (397)
T ss_pred HHhcCCceEEEEe
Confidence 9887777776553
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.63 E-value=0.058 Score=48.47 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=79.7
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhC---CceEEEecCCCCCCchhhhhhcC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELG---ARRVLVTGTGPLGCVPAELALRG 157 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~G---Ar~~~v~~lpplg~~P~~~~~~~ 157 (290)
.=+..+|.+|.||........ ...... .+.-.+.+..-+.++.+.- --+++.+++|+.-
T Consensus 177 ~~a~vVV~lGaND~q~~~~gd----~~~kf~----S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r---------- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQDFKVGD----VYEKFR----SDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR---------- 238 (354)
T ss_pred CccEEEEEecCCCHHhcccCC----eeeecC----chHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------
Confidence 346778899999998744221 110111 1234555556666655442 2368888988742
Q ss_pred CCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhC-ccCCCccccccccccccCCCCccccCCC
Q 022934 158 SNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSN-PQAYGFTTAKVACCGQGPNNGLGLCTAL 236 (290)
Q Consensus 158 ~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~n-P~~yGf~~~~~~Cc~~g~~~~~~~C~~~ 236 (290)
.+.+|.-...+|..+++.++.+. .+ ++|+++.+-+.-.+ -..+|+. .|+
T Consensus 239 -----~~~l~~dm~~ln~iy~~~vE~~~-----gk--~i~i~d~~v~e~G~~f~~~~~D-----------~NG------- 288 (354)
T COG2845 239 -----KKKLNADMVYLNKIYSKAVEKLG-----GK--FIDIWDGFVDEGGKDFVTTGVD-----------ING------- 288 (354)
T ss_pred -----ccccchHHHHHHHHHHHHHHHhC-----Ce--EEEecccccccCCceeEEeccc-----------cCC-------
Confidence 34466778899999999888773 23 35555543322111 1111111 111
Q ss_pred CCCCCCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 237 SNLCPNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 237 ~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
.+-.+.-=|++|.|.+|-+.+|.++++
T Consensus 289 -----q~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 289 -----QPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred -----ceEEEeccCCceechhhHHHHHHHHHH
Confidence 133445579999999999999999875
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=93.33 E-value=1.1 Score=37.21 Aligned_cols=127 Identities=14% Similarity=0.041 Sum_probs=68.1
Q ss_pred ceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCC--chhhhhhcCCCC
Q 022934 83 ALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGC--VPAELALRGSNG 160 (290)
Q Consensus 83 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~--~P~~~~~~~~~~ 160 (290)
+++++.-|--|+-. | . . .+.++|-.. ++.+...++.++.-++.=| ..+.+|+++ ...++... -.
T Consensus 52 DVIi~Ns~LWDl~r-y-~-------~-~~~~~Y~~N-L~~Lf~rLk~~lp~~allI-W~tt~Pv~~~~~ggfl~~~--~~ 117 (183)
T cd01842 52 DLVIMNSCLWDLSR-Y-Q-------R-NSMKTYREN-LERLFSKLDSVLPIECLIV-WNTAMPVAEEIKGGFLLPE--LH 117 (183)
T ss_pred eEEEEecceecccc-c-C-------C-CCHHHHHHH-HHHHHHHHHhhCCCccEEE-EecCCCCCcCCcCceeccc--cc
Confidence 67777888888743 1 1 1 134444222 3333333344345676544 445555432 21111110 00
Q ss_pred CccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCCCCccccCCCCCCC
Q 022934 161 GCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 240 (290)
Q Consensus 161 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C 240 (290)
.+...+..-+..+|..-+..+++ ..|.+.|++..|..-..
T Consensus 118 ~~~~~lr~dv~eaN~~A~~va~~-------~~~dVlDLh~~fr~~~~--------------------------------- 157 (183)
T cd01842 118 DLSKSLRYDVLEGNFYSATLAKC-------YGFDVLDLHYHFRHAMQ--------------------------------- 157 (183)
T ss_pred cccccchhHHHHHHHHHHHHHHH-------cCceeeehHHHHHhHHh---------------------------------
Confidence 12233344477888554444432 25778888888732111
Q ss_pred CCCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 241 PNRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 241 ~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
+--.|++|.++.+|+.+++.++.
T Consensus 158 -----~~~~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 158 -----HRVRDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred -----hcCCCCcCcCHHHHHHHHHHHHH
Confidence 12279999999999999998875
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=88.41 E-value=3.1 Score=36.64 Aligned_cols=139 Identities=17% Similarity=0.201 Sum_probs=80.5
Q ss_pred hhhcceeEEEecchhhhhhhhcCc-cC---cc-cccCChHH------HHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 022934 79 LVNRALVLITVGGNDFVNNYYLVP-YS---AR-SRQFTLPN------YVKYIISEYRKLLMRLYELGARRVLVTGTGPLG 147 (290)
Q Consensus 79 ~~~~sL~~i~iG~ND~~~~~~~~~-~~---~~-~~~~~~~~------~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg 147 (290)
...-++++|..|..-.+..-.... .. .. ....+.+. -++++++.+...++.|....-.-=+|+++.|+
T Consensus 99 l~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV- 177 (251)
T PF08885_consen 99 LEEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV- 177 (251)
T ss_pred HHhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc-
Confidence 446688899999987644321100 00 00 01112221 24667777778888887777654567788885
Q ss_pred CchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhhCccCCCccccccccccccCC
Q 022934 148 CVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPN 227 (290)
Q Consensus 148 ~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~g~~ 227 (290)
|...+... .-.-..|..++ ..|+..+.++.+.++ ++.||=.|.++++-+.+
T Consensus 178 --rl~~T~~~---~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrd------------------- 228 (251)
T PF08885_consen 178 --RLIATFRD---RDGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRD------------------- 228 (251)
T ss_pred --hhhccccc---ccchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCcccc-------------------
Confidence 43332111 11122333333 357778888877553 67888888887654332
Q ss_pred CCccccCCCCCCCCCCCCceee--CCCChhHHHHHHHHHH
Q 022934 228 NGLGLCTALSNLCPNRQLYAFW--DPFHPSEKANRLIVEQ 265 (290)
Q Consensus 228 ~~~~~C~~~~~~C~~p~~y~fw--D~~HPT~~~h~~ia~~ 265 (290)
|-|| |..||++.+-..|.+.
T Consensus 229 ------------------yrfy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 229 ------------------YRFYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred ------------------cccccccCCCCCHHHHHHHHhh
Confidence 2233 8999999988777654
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=80.08 E-value=4.9 Score=32.60 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeecc---ch
Q 022934 123 YRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAAN---TQ 199 (290)
Q Consensus 123 i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~~ 199 (290)
+.+.|++|.+.|+|+|+|+ |.++... ......+.+.+++++.++|+.+|.+.. .+
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G--------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~ 117 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPG--------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGLH 117 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCC--------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCCC
Confidence 3456677888899999984 7776532 122345678888899999999988764 34
Q ss_pred HHHHHhhh
Q 022934 200 QTHMDFVS 207 (290)
Q Consensus 200 ~~~~~ii~ 207 (290)
..+.+++.
T Consensus 118 p~l~~ll~ 125 (154)
T PLN02757 118 ELMVDVVN 125 (154)
T ss_pred HHHHHHHH
Confidence 45555543
No 44
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=71.98 E-value=18 Score=31.31 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=49.2
Q ss_pred EEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHH
Q 022934 86 LITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAE 165 (290)
Q Consensus 86 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~ 165 (290)
.|+.|.......|- ++- ....+ ....-+.+.++.|...|.|+|+|+|=- ++
T Consensus 61 ~i~yG~s~~h~~fp-----GTi-sl~~~----t~~~~l~di~~sl~~~Gf~~ivivngH---------------gG---- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGFP-----GTI-SLSPE----TLIALLRDILRSLARHGFRRIVIVNGH---------------GG---- 111 (237)
T ss_dssp -B--BB-GCCTTST-----T-B-BB-HH----HHHHHHHHHHHHHHHHT--EEEEEESS---------------TT----
T ss_pred CCccccCcccCCCC-----CeE-EeCHH----HHHHHHHHHHHHHHHcCCCEEEEEECC---------------Hh----
Confidence 45889888766441 111 11223 344556778888999999999998821 11
Q ss_pred hhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHh
Q 022934 166 LQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDF 205 (290)
Q Consensus 166 ~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 205 (290)
| ...|...+++++.++++..+.++|...+....
T Consensus 112 -N------~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 112 -N------IAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp -H------HHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred -H------HHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 1 12456677778877889999999998876544
No 45
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=67.59 E-value=14 Score=33.49 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCc
Q 022934 119 IISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTV 192 (290)
Q Consensus 119 ~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 192 (290)
-++.+.+.++++.++|.+.|++++++|- ...... ..+..|. |..+...+..+++++|+.-
T Consensus 52 s~d~l~~~v~~~~~~Gi~~v~lFgv~~~----~~KD~~-----gs~A~~~-----~g~v~~air~iK~~~p~l~ 111 (320)
T cd04823 52 SIDELLKEAEEAVDLGIPAVALFPVTPP----ELKSED-----GSEAYNP-----DNLVCRAIRAIKEAFPELG 111 (320)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCc----ccCCcc-----cccccCC-----CChHHHHHHHHHHhCCCcE
Confidence 4688889999999999999999998541 111111 1111111 3456777888888888753
No 46
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=67.35 E-value=21 Score=32.23 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCc
Q 022934 119 IISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTV 192 (290)
Q Consensus 119 ~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 192 (290)
-++.+.+.++++.++|.+.|+++++|.. +-+. ..+..|. |..+...+..+++.+|+.-
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~----------gs~A~~~-----~g~v~~air~iK~~~p~l~ 106 (314)
T cd00384 49 SVDSLVEEAEELADLGIRAVILFGIPEH-KDEI----------GSEAYDP-----DGIVQRAIRAIKEAVPELV 106 (314)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCC----------cccccCC-----CChHHHHHHHHHHhCCCcE
Confidence 4688889999999999999999999642 1111 1111111 3456777888888888653
No 47
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=65.92 E-value=11 Score=27.63 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeecc
Q 022934 125 KLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAAN 197 (290)
Q Consensus 125 ~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 197 (290)
+.+++|.+.|+++++|. |.++... ......+...++.++.++++.++.+.+
T Consensus 48 ~~l~~l~~~g~~~v~vv--------Plfl~~G--------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 48 EALDELAAQGATRIVVV--------PLFLLAG--------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHcCCCEEEEE--------eeEeCCC--------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 45677778899999885 5555431 122234566677777778888887754
No 48
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=65.19 E-value=21 Score=32.34 Aligned_cols=58 Identities=24% Similarity=0.255 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCc
Q 022934 119 IISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTV 192 (290)
Q Consensus 119 ~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 192 (290)
-++.+.+.++++.++|.+.|+++++|+. .-+. ..+..|. |..+...+..+++.+|+.-
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~----------gs~A~~~-----~g~v~~air~iK~~~pdl~ 116 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-KDAK----------GSDTWDD-----NGLLARMVRTIKAAVPEMM 116 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCC----------cccccCC-----CChHHHHHHHHHHHCCCeE
Confidence 4678889999999999999999999642 1111 1111111 4556778888998888764
No 49
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=64.23 E-value=13 Score=33.55 Aligned_cols=60 Identities=17% Similarity=0.111 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCC-CchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCc
Q 022934 119 IISEYRKLLMRLYELGARRVLVTGTGPLG-CVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTV 192 (290)
Q Consensus 119 ~v~~i~~~v~~L~~~GAr~~~v~~lpplg-~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 192 (290)
-++.+.+.++++.++|.+.|+++++|+-. .-+.. ..+ +-.=|..+...++.+++++|+.-
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~---------gs~-----a~~~~g~v~~air~iK~~~pdl~ 109 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS---------GSA-----ADDEDGPVIQAIKLIREEFPELL 109 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc---------ccc-----ccCCCChHHHHHHHHHHhCCCcE
Confidence 46788899999999999999999997521 22220 000 01113355677888888888753
No 50
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=63.82 E-value=26 Score=31.85 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccc
Q 022934 119 IISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANT 198 (290)
Q Consensus 119 ~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (290)
-++.+.+.++++.++|.+.|+++++|.. .-+. ..+..|. |..+...+..+++++|+.- ++.|+
T Consensus 57 s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~----------gs~A~~~-----~g~v~rair~iK~~~p~l~-vi~DV 119 (323)
T PRK09283 57 SIDLLVKEAEEAVELGIPAVALFGVPEL-KDED----------GSEAYNP-----DGLVQRAIRAIKKAFPELG-VITDV 119 (323)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcc----------cccccCC-----CCHHHHHHHHHHHhCCCcE-EEEee
Confidence 4677888999999999999999998432 1111 1111221 4456778888888888754 33343
No 51
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=62.35 E-value=14 Score=33.58 Aligned_cols=64 Identities=16% Similarity=0.256 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccc
Q 022934 120 ISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANT 198 (290)
Q Consensus 120 v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (290)
++.+.+.++++.++|.+.|+++++.+ |...... ..+..| =|..+...+..+++.+|+.- ++.|+
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~-----gs~a~~-----~~g~v~~air~iK~~~pdl~-vi~Dv 119 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE-----GSEAYN-----PDGLVQRAIRAIKKAFPDLL-VITDV 119 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------GGGGS-----TTSHHHHHHHHHHHHSTTSE-EEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc-----hhcccC-----CCChHHHHHHHHHHhCCCcE-EEEec
Confidence 67788899999999999999999843 2222211 111111 24456778888999988853 34443
No 52
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=60.94 E-value=4.8 Score=37.17 Aligned_cols=70 Identities=16% Similarity=0.087 Sum_probs=51.2
Q ss_pred hhhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhh
Q 022934 79 LVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELA 154 (290)
Q Consensus 79 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~ 154 (290)
...+.+++-|+|+||+...-.. ......-.-+......+.+++..++.++..+|+..+.|.++..|..+.
T Consensus 96 ~~~~~~~~~~a~gnd~A~gga~------~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVGGAR------STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cCcccccCcccccccHhhhccc------cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 3578899999999999764321 111110012334456678899999999999999999999999998775
No 53
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=58.93 E-value=24 Score=27.77 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCCceeeccchHHHHHhhhC---------------ccCCCccccccccccccCCCCccccCCCCCCCC
Q 022934 177 LEQMLQGINRKIGQTVFIAANTQQTHMDFVSN---------------PQAYGFTTAKVACCGQGPNNGLGLCTALSNLCP 241 (290)
Q Consensus 177 L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~n---------------P~~yGf~~~~~~Cc~~g~~~~~~~C~~~~~~C~ 241 (290)
|+.+|+.+++..-++-++..-++..+.+-+.= -+++||.-..-.= .
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf~v~D~s~-------------------~ 98 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGFNVADFSD-------------------D 98 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT--EEE-TT-------------------G
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEeccc-------------------C
Confidence 35666667665445666667777776664421 1355663221000 0
Q ss_pred CCCCceeeCCCChhHHHHHHHHHHHHc
Q 022934 242 NRQLYAFWDPFHPSEKANRLIVEQIFS 268 (290)
Q Consensus 242 ~p~~y~fwD~~HPT~~~h~~ia~~~~~ 268 (290)
.-+.|++-|.+||..+|+-.+-+.+..
T Consensus 99 ~y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 99 EYEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TTSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCCceeeecccCchhhHHHHHHHHHH
Confidence 235789999999999999888887753
No 54
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=58.84 E-value=1.2e+02 Score=26.01 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=76.4
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCC--ceEEEecCCCCCCchhhhhhc--
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGA--RRVLVTGTGPLGCVPAELALR-- 156 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA--r~~~v~~lpplg~~P~~~~~~-- 156 (290)
..++++|..|.-+.-...+... ...........| ...+..+...+.++..... .++++-+++|.. ....
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~-~~~~~~~~~~~y-~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h-----~~~~~~ 172 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEW-GDNKEINPLEAY-RNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVH-----FEGGDW 172 (263)
T ss_pred CCCEEEEEcchhhhhcchhccc-CCCcCcchHHHH-HHHHHHHHHHHHhhhccccccceEEEEecCCcc-----cccccc
Confidence 6788899999988754221100 000011122233 3445666667776665554 667777765532 1111
Q ss_pred CCCCCcc-----HHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccchHHHHHhhh-C--ccCCCccccccccccccCCC
Q 022934 157 GSNGGCS-----AELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVS-N--PQAYGFTTAKVACCGQGPNN 228 (290)
Q Consensus 157 ~~~~~c~-----~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ii~-n--P~~yGf~~~~~~Cc~~g~~~ 228 (290)
...+.|. ...+.....+|+.+...+ ..+.++.+.|+...+..... + |..|+=...
T Consensus 173 ~~gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r~~d~H~~~~~~~~~----------- 235 (263)
T PF13839_consen 173 NSGGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFRPDDAHPGIYRNQWP----------- 235 (263)
T ss_pred ccCCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhccccccCcccccCCCC-----------
Confidence 0023344 122344555555555444 14678889999655554443 2 433321110
Q ss_pred CccccCCCCCCCCCCCCceeeCCCC-hhHHHHHHHHHHHHc
Q 022934 229 GLGLCTALSNLCPNRQLYAFWDPFH-PSEKANRLIVEQIFS 268 (290)
Q Consensus 229 ~~~~C~~~~~~C~~p~~y~fwD~~H-PT~~~h~~ia~~~~~ 268 (290)
.-.=|++| +.+.+.+...+.+++
T Consensus 236 -----------------~~~~Dc~Hw~~p~v~d~~~~lL~~ 259 (263)
T PF13839_consen 236 -----------------RQPQDCLHWCLPGVIDTWNELLLN 259 (263)
T ss_pred -----------------CCCCCCcCcCCCcHHHHHHHHHHH
Confidence 00358889 777777777766654
No 55
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=53.50 E-value=5.5 Score=29.52 Aligned_cols=52 Identities=23% Similarity=0.204 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccc
Q 022934 125 KLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANT 198 (290)
Q Consensus 125 ~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (290)
+.+++|.+.|+++|+|+ |.++... ......+.+.++.++..+|+.++.+...
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G--------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG--------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS--------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc--------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 45578888999999886 5665321 1112235678888888889888887653
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=52.80 E-value=34 Score=30.87 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCC
Q 022934 118 YIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQT 191 (290)
Q Consensus 118 ~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~ 191 (290)
.-++.+.+.++++.++|.+-|+++++|+-. .....+ ..+-.-|..++..++.+++.+|+.
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g----------s~A~~~~givqravr~ik~~~p~l 117 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG----------SEAYDPDGIVQRAVRAIKEAFPEL 117 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc----------ccccCCCChHHHHHHHHHHhCCCe
Confidence 347888899999999999999999998632 221111 001112335667778888888743
No 57
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=50.46 E-value=29 Score=30.79 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=55.1
Q ss_pred hhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCC
Q 022934 80 VNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSN 159 (290)
Q Consensus 80 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~ 159 (290)
.++-+|-++|--||--..-. .+.+.....=++++++.+..|.+.|.|.++++++|| |.....
T Consensus 38 ~~nliyPlFI~e~~dd~~pI----------~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~---- 99 (340)
T KOG2794|consen 38 PANLIYPLFIHEGEDDFTPI----------DSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDP---- 99 (340)
T ss_pred hhheeeeEEEecCccccccc----------ccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCc----
Confidence 35667777777776431110 011222233477899999999999999999999975 222211
Q ss_pred CCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccc
Q 022934 160 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANT 198 (290)
Q Consensus 160 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 198 (290)
|. ..+..=|.-.-..+..|+..+|+. +++.|+
T Consensus 100 --~g----s~Ads~~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 100 --TG----SEADSDNGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred --cc----ccccCCCCcHHHHHHHHHHhCcce-EEEeee
Confidence 11 011222334456677888888876 334443
No 58
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=48.56 E-value=53 Score=24.64 Aligned_cols=51 Identities=31% Similarity=0.391 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeecc
Q 022934 123 YRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAAN 197 (290)
Q Consensus 123 i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 197 (290)
+.+.+++|.+.|+++++|. |.++... ..+ +.+...+++++.+ |+.++.+..
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G--------------~h~-~~i~~~~~~~~~~-~~~~i~~~~ 97 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG--------------VLM-DRIEEQVAELAAE-PGIEFVLAP 97 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC--------------chH-HHHHHHHHHHHhC-CCceEEECC
Confidence 3456677788999999886 5555421 111 2355566777766 777776643
No 59
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.46 E-value=28 Score=32.59 Aligned_cols=47 Identities=26% Similarity=0.515 Sum_probs=34.3
Q ss_pred HHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccch
Q 022934 129 RLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQ 199 (290)
Q Consensus 129 ~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 199 (290)
.+.+.|+.++ .-+-|.||.|..... +.++.++++++|++++.-+|..
T Consensus 327 e~i~~g~~nv--IclqPFGCmPnhI~~----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNV--ICLQPFGCMPNHIVS----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCce--EEecCccCCcHHHHH----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 3557788775 467799999966542 3567788888888888777764
No 60
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=47.40 E-value=18 Score=25.50 Aligned_cols=21 Identities=29% Similarity=0.327 Sum_probs=15.4
Q ss_pred HHHHHHHHHHhCCceEEEecC
Q 022934 123 YRKLLMRLYELGARRVLVTGT 143 (290)
Q Consensus 123 i~~~v~~L~~~GAr~~~v~~l 143 (290)
+.+.+.+|.++||+.|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 345667889999999999864
No 61
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=45.49 E-value=40 Score=30.40 Aligned_cols=19 Identities=16% Similarity=0.377 Sum_probs=14.7
Q ss_pred cceeEEEecchhhhhhhhc
Q 022934 82 RALVLITVGGNDFVNNYYL 100 (290)
Q Consensus 82 ~sL~~i~iG~ND~~~~~~~ 100 (290)
+-.=+++||+||+....+.
T Consensus 196 ~~~DF~SIGtNDLtQy~la 214 (293)
T PF02896_consen 196 KEVDFFSIGTNDLTQYTLA 214 (293)
T ss_dssp TTSSEEEEEHHHHHHHHHT
T ss_pred HHCCEEEEChhHHHHHHhh
Confidence 3366899999999876654
No 62
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=44.46 E-value=29 Score=25.89 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhCCceEEEecC
Q 022934 121 SEYRKLLMRLYELGARRVLVTGT 143 (290)
Q Consensus 121 ~~i~~~v~~L~~~GAr~~~v~~l 143 (290)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45677888999999999999753
No 63
>PRK13660 hypothetical protein; Provisional
Probab=41.39 E-value=1.2e+02 Score=25.24 Aligned_cols=27 Identities=33% Similarity=0.630 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCceEEEec
Q 022934 116 VKYIISEYRKLLMRLYELGARRVLVTG 142 (290)
Q Consensus 116 v~~~v~~i~~~v~~L~~~GAr~~~v~~ 142 (290)
+..+-..|.+.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 445667888999999999999887644
No 64
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=39.95 E-value=50 Score=27.37 Aligned_cols=27 Identities=26% Similarity=0.468 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCceEEEec
Q 022934 116 VKYIISEYRKLLMRLYELGARRVLVTG 142 (290)
Q Consensus 116 v~~~v~~i~~~v~~L~~~GAr~~~v~~ 142 (290)
+..+-..|.+.|.+|++.|.+.|+.-+
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 556778899999999999999887644
No 65
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=39.43 E-value=14 Score=29.20 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=14.2
Q ss_pred HhCCceEEEecCCCCC
Q 022934 132 ELGARRVLVTGTGPLG 147 (290)
Q Consensus 132 ~~GAr~~~v~~lpplg 147 (290)
..|||+||++|+|.+-
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 6799999999999865
No 66
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=36.34 E-value=95 Score=24.37 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHH
Q 022934 124 RKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATS 171 (290)
Q Consensus 124 ~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~ 171 (290)
.+.+++|.+.|+|+|+|+- |.+.. .|.+.+-++-.
T Consensus 80 ~~~l~~l~~~G~~~i~v~p-------~gF~~------D~~Etl~di~~ 114 (135)
T cd00419 80 DDALEELAKEGVKNVVVVP-------IGFVS------DHLETLYELDI 114 (135)
T ss_pred HHHHHHHHHcCCCeEEEEC-------Ccccc------ccHHHHHHHHH
Confidence 3567788899999999874 33432 57776665543
No 67
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=35.47 E-value=1.2e+02 Score=27.75 Aligned_cols=36 Identities=6% Similarity=-0.046 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 022934 111 TLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLG 147 (290)
Q Consensus 111 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg 147 (290)
+.++++.+++..+.+.++.|+++|+|.|-+ .=|.+.
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQi-DeP~l~ 181 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQF-DEPAFN 181 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cccHHh
Confidence 567889999999999999999999987644 434433
No 68
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=34.67 E-value=85 Score=22.01 Aligned_cols=60 Identities=22% Similarity=0.129 Sum_probs=29.7
Q ss_pred hCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhH---HHHHhhHHHHHHHHHHHHHcCCCc
Q 022934 133 LGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQR---ATSLYNPQLEQMLQGINRKIGQTV 192 (290)
Q Consensus 133 ~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~---~~~~~N~~L~~~l~~l~~~~~~~~ 192 (290)
-|||.|+++.++=..-.|..........+....+.. .=...-++|+.+++.|++..++.+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~ 71 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFE 71 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCC
Confidence 589999999887544111111110111222332222 222333566666677777777753
No 69
>COG1903 CbiD Cobalamin biosynthesis protein CbiD [Coenzyme metabolism]
Probab=34.51 E-value=3.5e+02 Score=25.23 Aligned_cols=90 Identities=21% Similarity=0.257 Sum_probs=55.9
Q ss_pred ccCcccccCCCCCcccccCHHHHHHHHHHHHHHHHHhhChHHHHHhhhcceeEEEecch--hhhhhhhcCccCcccccCC
Q 022934 34 SAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGN--DFVNNYYLVPYSARSRQFT 111 (290)
Q Consensus 34 ~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~N--D~~~~~~~~~~~~~~~~~~ 111 (290)
+||-.++..++. ..|.+-..++..+....+..+. . .-.-+++-.|.+ ||...++. .
T Consensus 167 vGGISILGTTGI--v~P~S~~a~~~si~~~l~~~r~---------~-~~~~iv~~~Gn~g~~~a~~~~~----------~ 224 (367)
T COG1903 167 VGGISILGTTGI--VEPMSEEAYLASIRSELDVARA---------A-GLDHVVFCPGNTGEDYARKLFI----------L 224 (367)
T ss_pred ccceEeecCCcc--cCcCChHHHHHHHHHHHHHHHh---------c-CCcEEEEccChhHHHHHHHhcC----------C
Confidence 466666666654 5678888888888776543221 1 223334455654 33333321 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCC
Q 022934 112 LPNYVKYIISEYRKLLMRLYELGARRVLVTGTGP 145 (290)
Q Consensus 112 ~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpp 145 (290)
++..+-.+.+-+-..|+...++|.+++++++.|-
T Consensus 225 ~~~~~v~~~n~vG~~l~~a~~~~~~~i~i~G~pG 258 (367)
T COG1903 225 PEQAIVKMGNFVGSMLKEARELGVKEILIFGHPG 258 (367)
T ss_pred chHHHhhHHHHHHHHHHHHHhcCCCEEEEEcChH
Confidence 2333345567777888888899999999999763
No 70
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=29.17 E-value=63 Score=26.02 Aligned_cols=24 Identities=25% Similarity=0.241 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCceEEEecCCCC
Q 022934 123 YRKLLMRLYELGARRVLVTGTGPL 146 (290)
Q Consensus 123 i~~~v~~L~~~GAr~~~v~~lppl 146 (290)
+.+.|++|.+.|+++++|+.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 356778899999999999987663
No 71
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=28.31 E-value=21 Score=23.88 Aligned_cols=8 Identities=50% Similarity=1.672 Sum_probs=6.8
Q ss_pred eeCCCChh
Q 022934 248 FWDPFHPS 255 (290)
Q Consensus 248 fwD~~HPT 255 (290)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 69999995
No 72
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=28.11 E-value=97 Score=28.82 Aligned_cols=36 Identities=17% Similarity=0.364 Sum_probs=29.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 022934 111 TLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLG 147 (290)
Q Consensus 111 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg 147 (290)
+.++++.+++..+.+.++.|+++|+|.|- +.=|.+.
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQ-iDep~l~ 195 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQ-LDDTVWA 195 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEE-ecCcchh
Confidence 56789999999999999999999998764 4555554
No 73
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=27.79 E-value=91 Score=24.36 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=22.8
Q ss_pred cHHhhHHHHHhhHHHHHHHHHHHHHc
Q 022934 163 SAELQRATSLYNPQLEQMLQGINRKI 188 (290)
Q Consensus 163 ~~~~n~~~~~~N~~L~~~l~~l~~~~ 188 (290)
.+..+.++..||..|.+.|.++.+++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999875
No 74
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=27.40 E-value=62 Score=32.14 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=15.8
Q ss_pred hhcceeEEEecchhhhhhhhc
Q 022934 80 VNRALVLITVGGNDFVNNYYL 100 (290)
Q Consensus 80 ~~~sL~~i~iG~ND~~~~~~~ 100 (290)
..+.+=+|++|+||+....+.
T Consensus 616 L~~~vDFvSVGtNDL~QyllA 636 (756)
T COG3605 616 LAKRVDFVSVGTNDLTQYLLA 636 (756)
T ss_pred HHhhCCEEEecchHHHHHHHH
Confidence 345556899999999876654
No 75
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=26.66 E-value=74 Score=23.72 Aligned_cols=18 Identities=22% Similarity=0.453 Sum_probs=14.4
Q ss_pred HHHHHHHHHhCCceEEEe
Q 022934 124 RKLLMRLYELGARRVLVT 141 (290)
Q Consensus 124 ~~~v~~L~~~GAr~~~v~ 141 (290)
.+.+++|.+.|+|+|+|.
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 455678889999999876
No 76
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=26.34 E-value=1.7e+02 Score=24.77 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccch
Q 022934 120 ISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQ 199 (290)
Q Consensus 120 v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 199 (290)
-..+...++.|.+.|+++|.+..+ +. . ...++++.+.+|+++|+..-+.
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~l--l~-~----------------------------~~gl~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSI--VA-A----------------------------PEGIEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--ec-C----------------------------HHHHHHHHHHCCCCEEEEEEEC
Confidence 356788899999999999988765 11 0 2455667778999998876554
Q ss_pred H
Q 022934 200 Q 200 (290)
Q Consensus 200 ~ 200 (290)
.
T Consensus 184 ~ 184 (207)
T TIGR01091 184 E 184 (207)
T ss_pred C
Confidence 3
No 77
>PRK06233 hypothetical protein; Provisional
Probab=26.21 E-value=1.1e+02 Score=28.49 Aligned_cols=36 Identities=19% Similarity=0.457 Sum_probs=29.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 022934 111 TLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLG 147 (290)
Q Consensus 111 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg 147 (290)
+.++++.+++..+.+.++.|+++|+|.|- +.=|.+.
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQ-iDeP~~~ 196 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQ-LDDTTWA 196 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEE-EcCCCHH
Confidence 56788999999999999999999998764 4445543
No 78
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=25.85 E-value=95 Score=27.31 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEec
Q 022934 118 YIISEYRKLLMRLYELGARRVLVTG 142 (290)
Q Consensus 118 ~~v~~i~~~v~~L~~~GAr~~~v~~ 142 (290)
.++.-+.+.++.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 3455667788999999999999988
No 79
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=24.71 E-value=1.9e+02 Score=25.71 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=35.1
Q ss_pred hcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCC
Q 022934 81 NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGP 145 (290)
Q Consensus 81 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpp 145 (290)
+...++|-+|+|=+.. +...+.+...+..|+..|.|-++|.+-.|
T Consensus 34 ~~~f~VIK~GG~~~~~--------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS--------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC--------------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5688888999865411 12466778888999999999999999877
No 80
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=24.67 E-value=84 Score=24.31 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeec
Q 022934 121 SEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAA 196 (290)
Q Consensus 121 ~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 196 (290)
..+.+.+++|.+.|.++|+|.. .++.. | ..| ..|.+.+++++ ++..+|.+.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~P--------l~l~~----G----------~e~-~di~~~v~~~~--~~~~~i~~g 106 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQS--------LHIIP----G----------EEY-EKLKREVDAFK--KGFKKIKLG 106 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEe--------CeeEC----c----------HHH-HHHHHHHHHHh--CCCceEEEc
Confidence 3456788999999999999973 33322 1 123 45666777666 455566554
No 81
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=23.60 E-value=1.1e+02 Score=21.89 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCceEEEecCCCC
Q 022934 124 RKLLMRLYELGARRVLVTGTGPL 146 (290)
Q Consensus 124 ~~~v~~L~~~GAr~~~v~~lppl 146 (290)
.+.++.|.+.|.++++|+-+-+.
T Consensus 48 ~~~l~~l~~~g~~~vvvvPl~~~ 70 (101)
T cd03409 48 EEAIRELAEEGYQRVVIVPLAPV 70 (101)
T ss_pred HHHHHHHHHcCCCeEEEEeCccc
Confidence 35677888999999998865543
No 82
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=22.56 E-value=2.7e+02 Score=25.20 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 022934 111 TLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLG 147 (290)
Q Consensus 111 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~~v~~lpplg 147 (290)
+..+++..++..+...++.|+++|++ ++-+.=|.+.
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~ 180 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALA 180 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhh
Confidence 45678999999999999999999995 5555555443
No 83
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=22.08 E-value=2.5e+02 Score=23.74 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccch
Q 022934 120 ISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQ 199 (290)
Q Consensus 120 v~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 199 (290)
-..+...++.|.+.|+++|.+..+ +.+ ...++++.+++|+++|+..-+.
T Consensus 137 G~Tl~~ai~~L~~~G~~~I~~~~l--l~~-----------------------------~~gl~~l~~~~p~v~i~~~~iD 185 (209)
T PRK00129 137 GGSAIAAIDLLKKRGAKNIKVLCL--VAA-----------------------------PEGIKALEEAHPDVEIYTAAID 185 (209)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--ecC-----------------------------HHHHHHHHHHCCCcEEEEEeec
Confidence 356778899999999999988875 111 2455667778899998776443
No 84
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=22.03 E-value=1.9e+02 Score=19.40 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=19.9
Q ss_pred ceeeccchHHHHHhh--hCccCCCccccc
Q 022934 192 VFIAANTQQTHMDFV--SNPQAYGFTTAK 218 (290)
Q Consensus 192 ~i~~~D~~~~~~~ii--~nP~~yGf~~~~ 218 (290)
.+.+.++...+.... =+|+.|||....
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l~ 51 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSLS 51 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSHH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcHH
Confidence 677888888888777 368999998643
No 85
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=21.52 E-value=1.6e+02 Score=28.57 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhCCceEEEecCCCCCCchhhhhhcCCCCCccHHhhHHHHHhhHHHHHHHHHHHHHcCCCceeeccc--
Q 022934 121 SEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANT-- 198 (290)
Q Consensus 121 ~~i~~~v~~L~~~GAr~~~v~~lpplg~~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~-- 198 (290)
.++.+.++.|.+.|++-++| . .+..|+..+.++++++++++|+..++-.|+
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~-D--------------------------~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t 278 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVV-D--------------------------TAHGHQEKMLEALRAVRALDPGVPIVAGNVVT 278 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEE-e--------------------------ccCCccHHHHHHHHHHHHHCCCCeEEeeccCC
Confidence 35667777888888876443 2 134457788899999999999988877564
Q ss_pred hHHHHHhhh
Q 022934 199 QQTHMDFVS 207 (290)
Q Consensus 199 ~~~~~~ii~ 207 (290)
+.-..++++
T Consensus 279 ~~~a~~l~~ 287 (479)
T PRK07807 279 AEGTRDLVE 287 (479)
T ss_pred HHHHHHHHH
Confidence 455555554
No 86
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=21.09 E-value=1.1e+02 Score=23.84 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCCceEEEe
Q 022934 123 YRKLLMRLYELGARRVLVT 141 (290)
Q Consensus 123 i~~~v~~L~~~GAr~~~v~ 141 (290)
+.+.+++|.+.|+++|+|+
T Consensus 46 l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 4567788999999999987
No 87
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=21.08 E-value=1.5e+02 Score=22.73 Aligned_cols=26 Identities=23% Similarity=0.221 Sum_probs=22.8
Q ss_pred cHHhhHHHHHhhHHHHHHHHHHHHHc
Q 022934 163 SAELQRATSLYNPQLEQMLQGINRKI 188 (290)
Q Consensus 163 ~~~~n~~~~~~N~~L~~~l~~l~~~~ 188 (290)
.+..+.++..||..|.+.+.++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45677899999999999999999876
No 88
>PLN02825 amino-acid N-acetyltransferase
Probab=20.42 E-value=3e+02 Score=27.05 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhChHHHHHhhhcceeEEEecchhhhhhhhcCccCcccccCChHHHHHHHHHHHHHHHHHHHHhCCc
Q 022934 57 LDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGAR 136 (290)
Q Consensus 57 i~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr 136 (290)
|+||.+....+. ...+..|+|.+|++=+... ...++...|..|..+|.|
T Consensus 2 v~~fr~a~pYI~----------~~rgktfVIk~gG~~l~~~---------------------~~~~l~~DialL~~lGi~ 50 (515)
T PLN02825 2 VRWFREAWPYIQ----------GHRGSTFVVVISGEVVAGP---------------------HLDNILQDISLLHGLGIK 50 (515)
T ss_pred hhHHHhhhHHHH----------HHCCCEEEEEECchhhcCc---------------------hHHHHHHHHHHHHHCCCC
Confidence 466766544332 2356678888888543210 134566777889999999
Q ss_pred eEEEecCCC
Q 022934 137 RVLVTGTGP 145 (290)
Q Consensus 137 ~~~v~~lpp 145 (290)
-|+|.+-.|
T Consensus 51 ~VlVHGggp 59 (515)
T PLN02825 51 FVLVPGTHV 59 (515)
T ss_pred EEEEcCCCH
Confidence 999998765
Done!