Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022941
MAKRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFR
PLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK
EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCI
VVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPG
LIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022941
        (289 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006537 - symbol:AT4G30993 "AT4G30993" speci...   556  8.9e-54   1


>TAIR|locus:505006537 [details] [associations]
            symbol:AT4G30993 "AT4G30993" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002687 EMBL:AK119097 IPI:IPI00537662
            RefSeq:NP_567863.1 UniGene:At.25467 ProteinModelPortal:Q8GW42
            STRING:Q8GW42 EnsemblPlants:AT4G30993.2 GeneID:829225
            KEGG:ath:AT4G30993 TAIR:At4g30993 eggNOG:NOG279646
            HOGENOM:HOG000241720 InParanoid:Q8GW42 OMA:PLWQNGS PhylomeDB:Q8GW42
            ProtClustDB:CLSN2689695 Genevestigator:Q8GW42 Uniprot:Q8GW42
        Length = 285

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 123/292 (42%), Positives = 175/292 (59%)

Query:     3 KRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPL 62
             K+ SW CT+  QLSLCL +YV+L+ G P    +   +G   N   LD +FISV GGFRPL
Sbjct:     2 KQSSWGCTIFIQLSLCLIIYVSLHSGHP--FFFSSDDG--DNATPLDLHFISVAGGFRPL 57

Query:    63 EQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEV 122
               QT LL+ ME VA++Y A+FV+++SE GE+DP  QNAT L  SLK+PWYT    + K  
Sbjct:    58 NHQTRLLRLMEKVAETYKAKFVVSSSEQGEEDPFLQNATRLSSSLKLPWYT----RMKGS 113

Query:   123 GCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVV 182
             G F+E I++P G +LD++ V+TGSL+ ++     +A     L  L   L+A +G W IVV
Sbjct:   114 GYFREHIKMPFGGSLDVVFVDTGSLKQEVLGGAVNAYMISQLKGLTRILKAVDGDWRIVV 173

Query:   183 GFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLI 242
             G  PL+     +E  E K++    H I  K+GVN Y+S+ GC +    +S+T +  P   
Sbjct:   174 GSDPLLAYTLTKEPEEPKRVARTFHQIMTKYGVNLYISEKGCTRGGSNESLTCITVPNQQ 233

Query:   243 ES-----GNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
             E+      + RE  DGFLLH+VS  E +TY +   GEV+     +++GKE +
Sbjct:   234 ENQGPTNNSKREREDGFLLHRVSFSEFVTYTINSSGEVIDTKLVKQKGKETI 285


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      289       289   0.00088  115 3  11 22  0.38    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  216 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.48u 0.10s 22.58t   Elapsed:  00:00:01
  Total cpu time:  22.48u 0.10s 22.58t   Elapsed:  00:00:01
  Start:  Sat May 11 03:16:34 2013   End:  Sat May 11 03:16:35 2013

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