Query 022941
Match_columns 289
No_of_seqs 227 out of 1588
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 13:43:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022941.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022941hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tgh_A Glideosome-associated p 100.0 4.6E-41 1.6E-45 303.8 22.1 234 48-287 2-310 (342)
2 1ute_A Protein (II purple acid 100.0 2.8E-33 9.7E-38 248.8 23.4 237 46-286 3-305 (313)
3 1xzw_A Purple acid phosphatase 100.0 2.5E-30 8.5E-35 241.1 20.8 225 46-284 123-422 (426)
4 2qfp_A Purple acid phosphatase 100.0 6.8E-29 2.3E-33 231.2 18.1 226 46-285 116-416 (424)
5 3d03_A Phosphohydrolase; glyce 100.0 1.4E-27 4.9E-32 208.6 18.7 215 50-271 1-254 (274)
6 3ib7_A ICC protein; metallopho 99.9 1.2E-27 4.3E-32 214.5 14.6 222 44-271 20-278 (330)
7 2nxf_A Putative dimetal phosph 99.9 5.8E-27 2E-31 208.6 13.1 218 47-270 3-312 (322)
8 2xmo_A LMO2642 protein; phosph 99.9 3.5E-25 1.2E-29 207.1 18.7 220 45-270 35-331 (443)
9 2yeq_A Apased, PHOD, alkaline 99.8 6.9E-20 2.4E-24 174.5 17.2 216 47-270 114-458 (527)
10 1uf3_A Hypothetical protein TT 99.8 4.1E-18 1.4E-22 144.2 14.8 196 48-261 4-219 (228)
11 2yvt_A Hypothetical protein AQ 99.8 1.5E-17 5.1E-22 144.0 15.6 206 49-268 5-258 (260)
12 2q8u_A Exonuclease, putative; 99.7 6E-17 2.1E-21 146.0 15.0 231 46-281 15-289 (336)
13 3ck2_A Conserved uncharacteriz 99.7 4.4E-16 1.5E-20 127.6 15.5 165 49-280 6-171 (176)
14 1z2w_A Vacuolar protein sortin 99.7 2.4E-16 8.4E-21 130.9 13.8 178 48-283 9-191 (192)
15 2a22_A Vacuolar protein sortin 99.7 6.8E-17 2.3E-21 136.8 9.9 185 47-280 23-212 (215)
16 1nnw_A Hypothetical protein; s 99.7 1.7E-16 5.8E-21 137.0 9.0 212 50-272 2-225 (252)
17 3av0_A DNA double-strand break 99.6 2E-15 6.8E-20 138.7 15.0 212 46-276 17-269 (386)
18 1s3l_A Hypothetical protein MJ 99.6 8.8E-15 3E-19 121.4 16.3 164 47-267 23-188 (190)
19 3rqz_A Metallophosphoesterase; 99.6 1.3E-15 4.4E-20 131.4 4.6 196 48-271 2-220 (246)
20 3qfm_A SAPH, putative uncharac 99.6 8.3E-15 2.8E-19 128.1 9.0 209 46-270 8-228 (270)
21 3tho_B Exonuclease, putative; 99.6 3.5E-14 1.2E-18 130.0 13.5 221 50-281 1-271 (379)
22 3rl5_A Metallophosphoesterase 99.5 9.7E-14 3.3E-18 122.1 12.3 183 45-244 55-278 (296)
23 1xm7_A Hypothetical protein AQ 99.5 1.5E-14 5.2E-19 120.2 5.9 153 50-240 2-171 (195)
24 2kkn_A Uncharacterized protein 99.4 7.9E-13 2.7E-17 108.4 11.3 157 47-270 20-177 (178)
25 1su1_A Hypothetical protein YF 99.4 3E-12 1E-16 107.5 12.8 172 49-281 25-205 (208)
26 3t1i_A Double-strand break rep 99.4 2.5E-11 8.5E-16 112.1 18.7 95 177-281 230-332 (431)
27 4fbw_A DNA repair protein RAD3 99.4 6.1E-12 2.1E-16 115.7 13.1 88 176-273 210-304 (417)
28 4fbk_A DNA repair and telomere 99.4 6.8E-12 2.3E-16 116.4 13.2 95 177-281 274-376 (472)
29 1ii7_A MRE11 nuclease; RAD50, 99.3 5.1E-12 1.8E-16 113.5 7.1 71 50-120 1-87 (333)
30 1hp1_A 5'-nucleotidase; metall 99.0 2E-08 6.9E-13 95.3 18.7 177 46-227 5-232 (516)
31 1g5b_A Serine/threonine protei 98.8 8.2E-09 2.8E-13 87.0 7.3 183 48-241 11-206 (221)
32 2z1a_A 5'-nucleotidase; metal- 98.8 4.9E-08 1.7E-12 93.4 12.7 164 46-227 26-243 (552)
33 3qfk_A Uncharacterized protein 98.7 3.8E-07 1.3E-11 86.8 14.9 208 45-262 15-281 (527)
34 2wdc_A SOXB, sulfur oxidation 98.6 1E-06 3.6E-11 84.3 15.8 160 80-264 122-324 (562)
35 4h2g_A 5'-nucleotidase; dimer, 98.4 7.6E-07 2.6E-11 85.0 10.4 77 44-121 20-118 (546)
36 3ive_A Nucleotidase; structura 98.4 1.2E-05 4.1E-10 76.0 16.6 75 47-123 4-99 (509)
37 3ztv_A NAD nucleotidase, NADN; 98.2 7.7E-06 2.6E-10 78.6 11.0 76 45-121 8-106 (579)
38 3c9f_A 5'-nucleotidase; 2',3'- 98.1 0.0002 7E-09 68.2 19.7 78 45-123 11-109 (557)
39 1t71_A Phosphatase, conserved 98.0 5.7E-05 2E-09 65.6 12.0 73 49-123 4-77 (281)
40 3gve_A YFKN protein; alpha-bet 98.0 0.00027 9.3E-09 63.3 16.0 54 168-227 200-254 (341)
41 1t70_A Phosphatase; crystal, X 97.7 0.00035 1.2E-08 59.9 12.0 70 50-123 1-71 (255)
42 2z06_A Putative uncharacterize 97.7 0.00042 1.4E-08 59.2 12.2 70 50-123 1-71 (252)
43 3jyf_A 2',3'-cyclic nucleotide 97.7 0.00035 1.2E-08 62.5 11.5 76 46-122 5-106 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.6 0.00041 1.4E-08 65.8 11.9 50 161-226 172-222 (530)
45 2dfj_A Diadenosinetetraphospha 97.5 2.8E-05 9.5E-10 67.8 2.4 66 51-119 2-67 (280)
46 2qjc_A Diadenosine tetraphosph 97.4 6.9E-05 2.4E-09 64.6 2.6 66 49-120 18-84 (262)
47 2z72_A Protein-tyrosine-phosph 96.4 0.0012 4E-08 59.1 2.3 70 47-119 68-151 (342)
48 3h63_A Serine/threonine-protei 96.3 0.003 1E-07 55.6 4.6 70 47-119 57-130 (315)
49 1wao_1 Serine/threonine protei 96.3 0.0025 8.7E-08 59.4 4.3 70 47-119 210-283 (477)
50 2ie4_C PP2A-alpha;, serine/thr 96.3 0.0024 8.1E-08 56.3 3.5 67 50-120 50-120 (309)
51 3icf_A PPT, serine/threonine-p 96.0 0.0048 1.6E-07 54.8 4.2 69 48-119 62-134 (335)
52 1fjm_A Protein serine/threonin 95.9 0.0045 1.5E-07 55.0 3.4 66 51-120 58-127 (330)
53 3e7a_A PP-1A, serine/threonine 95.2 0.012 4E-07 51.5 3.4 65 51-119 57-125 (299)
54 1aui_A Calcineurin, serine/thr 94.8 0.013 4.4E-07 54.8 2.9 65 51-119 84-152 (521)
55 3ll8_A Serine/threonine-protei 94.8 0.018 6.3E-07 51.4 3.6 65 51-119 71-139 (357)
56 3e0j_A DNA polymerase subunit 87.3 1.1 3.8E-05 41.5 6.6 73 47-119 198-307 (476)
57 3flo_A DNA polymerase alpha su 79.2 2.8 9.6E-05 38.6 5.7 73 47-119 145-245 (460)
58 3w01_A Heptaprenylglyceryl pho 50.5 11 0.00039 31.2 3.3 65 49-119 11-75 (235)
59 1qv9_A F420-dependent methylen 49.1 75 0.0026 26.4 7.8 70 44-115 27-98 (283)
60 2z72_A Protein-tyrosine-phosph 41.3 63 0.0021 28.1 6.9 61 204-274 268-331 (342)
61 1wao_1 Serine/threonine protei 40.9 72 0.0025 28.9 7.5 24 204-227 387-410 (477)
62 3vzx_A Heptaprenylglyceryl pho 37.3 16 0.00054 30.2 2.2 66 48-119 5-70 (228)
63 2pq4_B Periplasmic nitrate red 37.0 13 0.00046 20.9 1.1 17 1-17 3-19 (35)
64 2qjc_A Diadenosine tetraphosph 36.7 40 0.0014 28.1 4.7 42 214-263 196-240 (262)
65 1z65_A PRPLP, prion-like prote 31.2 64 0.0022 17.2 3.4 17 14-30 10-26 (30)
66 3iwt_A 178AA long hypothetical 28.7 73 0.0025 24.6 4.7 26 66-91 67-92 (178)
67 1y5e_A Molybdenum cofactor bio 28.4 78 0.0027 24.3 4.8 28 65-92 57-84 (169)
68 3ldt_A Outer membrane protein, 28.1 97 0.0033 23.9 5.3 67 158-225 22-96 (169)
69 1jlj_A Gephyrin; globular alph 28.0 85 0.0029 24.8 5.0 38 49-92 53-90 (189)
70 1mkz_A Molybdenum cofactor bio 27.7 83 0.0028 24.3 4.9 26 66-91 55-80 (172)
71 1di6_A MOGA, molybdenum cofact 27.2 93 0.0032 24.7 5.1 36 50-91 42-77 (195)
72 1uuy_A CNX1, molybdopterin bio 27.1 93 0.0032 23.8 5.0 38 49-92 46-83 (167)
73 2is8_A Molybdopterin biosynthe 26.6 97 0.0033 23.7 5.0 38 49-92 37-74 (164)
74 2fyw_A Conserved hypothetical 26.4 54 0.0018 27.5 3.7 44 179-225 61-104 (267)
75 2pjk_A 178AA long hypothetical 26.1 87 0.003 24.4 4.7 27 65-91 66-92 (178)
76 2yyb_A Hypothetical protein TT 26.1 55 0.0019 27.0 3.7 41 180-225 60-100 (242)
77 3omb_A Extracellular solute-bi 25.6 47 0.0016 30.5 3.5 12 46-57 38-49 (535)
78 2pbq_A Molybdenum cofactor bio 23.7 1.1E+02 0.0036 23.8 4.8 36 51-92 45-80 (178)
79 2k1s_A Inner membrane lipoprot 23.1 1.6E+02 0.0056 21.9 5.7 22 203-224 53-75 (149)
No 1
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.6e-41 Score=303.81 Aligned_cols=234 Identities=20% Similarity=0.210 Sum_probs=186.9
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC------CChhhhhhhc-cCC----CCCCCeEEecC
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE------DDPLKQNATW-LFP----SLKVPWYTTKA 116 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~------~~~~~~~~~~-~~~----~l~~P~~~v~G 116 (289)
.++||+++||.+.|...|..++++|.+++++.+|||||++||+.. .+++|++.++ ++. .+++|||+++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 579999999977888999999999999999999999999999732 3556776664 443 46899999999
Q ss_pred CCcCCCCc----------------------------eeEeEeCCCC-------------------C----eEEEEEEcCC
Q 022941 117 SKEKEVGC----------------------------FQEQIRLPHG-------------------E----ALDIIGVNTG 145 (289)
Q Consensus 117 NHD~~~~~----------------------------~~~~~~~p~~-------------------~----~~~~i~lDt~ 145 (289)
||| +.++ ...+|.+|+. + .++||+|||+
T Consensus 82 NHD-~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~ 160 (342)
T 3tgh_A 82 TRD-WTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTW 160 (342)
T ss_dssp HHH-HTSCHHHHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTT
T ss_pred CCc-cCCCchHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCc
Confidence 999 5543 1235666631 1 4899999998
Q ss_pred CccCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCc
Q 022941 146 SLQGKIPTA-LPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGC 224 (289)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H 224 (289)
.+...++.. ......++|++||+++|+. ++|+||++|||+++.+.+ ++...++++|.++|++|+|+++||||+|
T Consensus 161 ~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~--~~~~IV~~HhP~~~~~~~---~~~~~l~~~l~~ll~~~~VdlvlsGH~H 235 (342)
T 3tgh_A 161 VLSSNFPYKKIHEKAWNDLKSQLSVAKKI--ADFIIVVGDQPIYSSGYS---RGSSYLAYYLLPLLKDAEVDLYISGHDN 235 (342)
T ss_dssp TTSTTCSCHHHHHHHHHHHHHHHHHHHHH--CSEEEEECSSCSSCSSTT---CCCHHHHHHTHHHHHHTTCCEEEECSSS
T ss_pred ccccCCcccccchHHHHHHHHHHHHhhcc--CCcEEEEECCCCCCCCCC---CCcHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 775432200 0123567999999999953 579999999999998765 2335668899999999999999999999
Q ss_pred cce-ecCCCeEEEecCCCCCCCCC----------cccCCcEEEEEEeCcEEEEEEEc-CCCcEEEEEEEecCCcc
Q 022941 225 IKY-SRQDSITYMENPGLIESGNG----------REMVDGFLLHKVSSLEILTYFVT-LEGEVVYRTATRERGKE 287 (289)
Q Consensus 225 ~~~-~~~~gi~~i~~g~~~~~~~g----------~~~~~gf~~v~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~~ 287 (289)
.+. ...+|+.|+++|+++..+.. ....+||.+++++++++++++++ .+|+++|+++|.|+.++
T Consensus 236 ~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 236 NMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp SEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred ceeEEeeCCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 976 55567999999998776421 24689999999999999999999 99999999999998875
No 2
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=100.00 E-value=2.8e-33 Score=248.82 Aligned_cols=237 Identities=18% Similarity=0.277 Sum_probs=173.6
Q ss_pred CCccEEEEEEeCCCCCC------hhHHHHHHHHHHHHhhCCccEEEEcCCCCC-------CChhhhhhhc-cCC--CC-C
Q 022941 46 KGLDFYFISVTGGFRPL------EQQTLLLKQMEDVAKSYDARFVINTSELGE-------DDPLKQNATW-LFP--SL-K 108 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~------~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~-------~~~~~~~~~~-~~~--~l-~ 108 (289)
.+++++|+++||.|.+. ..+..+.+.+.++++..+|||||++||+.. .+.+|...++ .+. .+ +
T Consensus 3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 82 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 82 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred CCCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcC
Confidence 35789999999976653 235677777877666779999999999731 2234444443 333 36 7
Q ss_pred CCeEEecCCCcCCCCce--------------------eEeEeCCC-CCeEEEEEEcCCCccCCC---C----CC-CCCCc
Q 022941 109 VPWYTTKASKEKEVGCF--------------------QEQIRLPH-GEALDIIGVNTGSLQGKI---P----TA-LPSAS 159 (289)
Q Consensus 109 ~P~~~v~GNHD~~~~~~--------------------~~~~~~p~-~~~~~~i~lDt~~~~~~~---~----~~-~~~~~ 159 (289)
+|+++++|||| +..++ ...+.+|. +++++||+|||..+.... . .+ ..+.+
T Consensus 83 ~p~~~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~ 161 (313)
T 1ute_A 83 VPWHVLAGNHD-HLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLAL 161 (313)
T ss_dssp CCEEECCCHHH-HHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHH
T ss_pred CCEEEECCCCc-cCCCccccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccch
Confidence 99999999999 32221 11122343 258999999997643211 0 01 12256
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--ecCCCeEEEe
Q 022941 160 GDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--SRQDSITYME 237 (289)
Q Consensus 160 ~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~~~~gi~~i~ 237 (289)
..+|++||++.|++++++|+||++|||++..+.++ ....+++.+.++|++++|+++||||+|.+. ...+|+.|++
T Consensus 162 ~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~---~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~ 238 (313)
T 1ute_A 162 ARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHG---PTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVL 238 (313)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSC---CCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCC---CcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEE
Confidence 78999999999999888899999999999876542 123456789999999999999999999854 4467999999
Q ss_pred cCCCCCCCCC------------------cccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEEEecCCc
Q 022941 238 NPGLIESGNG------------------REMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGK 286 (289)
Q Consensus 238 ~g~~~~~~~g------------------~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~i~~~~~ 286 (289)
+|+++..+.. .....||.+++++++.+++++++.+|+++++++|.|+.+
T Consensus 239 ~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~~~g~~~~~~~l~~~~~ 305 (313)
T 1ute_A 239 SGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRAR 305 (313)
T ss_dssp ECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCEEEEEEECCCC-
T ss_pred ECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEEcCEEEEEEEcCCCcEEEEEEeccccC
Confidence 9987653211 012379999999999999999999999999999998764
No 3
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.97 E-value=2.5e-30 Score=241.06 Aligned_cols=225 Identities=16% Similarity=0.156 Sum_probs=158.8
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-CCccEEEEcCCCCCC-------ChhhhhhhccCCC--CCCCeEEec
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-YDARFVINTSELGED-------DPLKQNATWLFPS--LKVPWYTTK 115 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~-------~~~~~~~~~~~~~--l~~P~~~v~ 115 (289)
...++||+++||.+.+... .+.+.++.+. .+|||||++||+... +..|..+.+.+.. ..+|+++++
T Consensus 123 ~~~~~~f~~~gD~~~~~~~----~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~ 198 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHDS----NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTA 198 (426)
T ss_dssp TTCCEEEEEECSCTTBHHH----HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCC
T ss_pred CCCCeEEEEEEeCCCCCch----HHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEec
Confidence 4678999999996654221 2233344433 489999999998643 2345544333322 278999999
Q ss_pred CCCcCCCC-------c---eeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 116 ASKEKEVG-------C---FQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 116 GNHD~~~~-------~---~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
||||.... . +.++|.+|. .++++|++|||.... ....+|++||+++|
T Consensus 199 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~---------~~~~~Q~~WL~~~L 269 (426)
T 1xzw_A 199 GNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGF---------VKYSPQYKWFTSEL 269 (426)
T ss_dssp CGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCC---------STTSHHHHHHHHHH
T ss_pred cccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccC---------CCCHHHHHHHHHHH
Confidence 99994321 1 223455552 256899999986421 23578999999999
Q ss_pred hhc---CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ec------------------
Q 022941 172 EAT---NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SR------------------ 229 (289)
Q Consensus 172 ~~~---~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~------------------ 229 (289)
++. +.+|+||++|+|+++.+.. ...+...+++.|.++|++++|+++||||+|.+. ..
T Consensus 270 ~~~~~~~~~w~Iv~~H~P~~~~~~~-~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~ 348 (426)
T 1xzw_A 270 EKVNRSETPWLIVLVHAPLYNSYEA-HYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVS 348 (426)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBST-TTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEE
T ss_pred HhhhhcCCCEEEEEeccCceeCCCc-ccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCcccccc
Confidence 985 3569999999999986542 112234568899999999999999999999965 11
Q ss_pred -CCCeEEEecCCCCCCC--C--------C----cccCCcEEEEEEeC-cEEEEEEE-cCCCc--EEEEEEEecC
Q 022941 230 -QDSITYMENPGLIESG--N--------G----REMVDGFLLHKVSS-LEILTYFV-TLEGE--VVYRTATRER 284 (289)
Q Consensus 230 -~~gi~~i~~g~~~~~~--~--------g----~~~~~gf~~v~v~~-~~i~~~~~-~~~g~--~~~~~~i~~~ 284 (289)
.+++.||++|+++... . . ....+||..+++.+ ..+.++++ +.+|+ +.|+++|.|+
T Consensus 349 ~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 349 DESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp CTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred CCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 2578899998865421 0 0 34579999999955 46999998 57887 8999999986
No 4
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.96 E-value=6.8e-29 Score=231.21 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-CCccEEEEcCCCCCCC-------hhhhhhhccCCC--CCCCeEEec
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-YDARFVINTSELGEDD-------PLKQNATWLFPS--LKVPWYTTK 115 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~-------~~~~~~~~~~~~--l~~P~~~v~ 115 (289)
...++||+++||.+.+... .+.+..+.+. .+|||||++||+...+ ..|+.+.+.++. ..+|+++++
T Consensus 116 ~~~~~~f~~igD~~~~~~~----~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~ 191 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFDS----NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTA 191 (424)
T ss_dssp TTCCEEEEEECSCTTBHHH----HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECC
T ss_pred CCCCeEEEEEEeCCCCCCh----HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeec
Confidence 4578999999997654321 1234444443 3899999999986532 244433332222 158999999
Q ss_pred CCCcCCC----C---c---eeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 116 ASKEKEV----G---C---FQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 116 GNHD~~~----~---~---~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
||||... + . +.++|.+|. .++++|++|||.... ....+|++||+++|
T Consensus 192 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~---------~~~~~Q~~WL~~~L 262 (424)
T 2qfp_A 192 GNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAY---------GRGTPQYTWLKKEL 262 (424)
T ss_dssp CHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCC---------STTSHHHHHHHHHH
T ss_pred CCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccC---------CCcHHHHHHHHHHH
Confidence 9999322 1 1 123344541 246899999986421 12348999999999
Q ss_pred hhcC---CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e-c-----------------
Q 022941 172 EATN---GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S-R----------------- 229 (289)
Q Consensus 172 ~~~~---~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~-~----------------- 229 (289)
++.+ .+|+||++|+|+++.... ...+...+++.|.++|++++|+++||||+|.+. . .
T Consensus 263 ~~~~~~~~~~~Iv~~H~P~~~~~~~-~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~ 341 (424)
T 2qfp_A 263 RKVKRSETPWLIVLMHSPLYNSYNH-HFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVK 341 (424)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBST-TTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEE
T ss_pred hhhcccCCCEEEEEeCcCceecCcc-cccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCcccccc
Confidence 9853 469999999999986532 112234567899999999999999999999955 1 1
Q ss_pred -CCCeEEEecCCCCCC------CC----C----cccCCcEEEEEEeC-cEEEEEEE-cCCCcEE--EEEEEecCC
Q 022941 230 -QDSITYMENPGLIES------GN----G----REMVDGFLLHKVSS-LEILTYFV-TLEGEVV--YRTATRERG 285 (289)
Q Consensus 230 -~~gi~~i~~g~~~~~------~~----g----~~~~~gf~~v~v~~-~~i~~~~~-~~~g~~~--~~~~i~~~~ 285 (289)
.+++.||++|+++.. +. . +...+||..+++.+ ..+.++++ +.+|+++ |+++|.|+.
T Consensus 342 ~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 342 DQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp CTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred CCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 246789999876543 10 0 23578999999954 56899987 5789874 999999874
No 5
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.95 E-value=1.4e-27 Score=208.56 Aligned_cols=215 Identities=12% Similarity=0.109 Sum_probs=149.8
Q ss_pred EEEEEEeCCCCCC---------hhHHHHHHHHHHHHhh-CCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCC
Q 022941 50 FYFISVTGGFRPL---------EQQTLLLKQMEDVAKS-YDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKAS 117 (289)
Q Consensus 50 ~~f~~~gD~~~g~---------~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GN 117 (289)
+||++++|.|.+. .....+.+.+..+.+. .+||+||++||+..... .|+...+.++.+++|+++++||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4899999977653 1123444445444433 36899999999865432 3444455667788999999999
Q ss_pred CcCCCCce----eE------------eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEE
Q 022941 118 KEKEVGCF----QE------------QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIV 181 (289)
Q Consensus 118 HD~~~~~~----~~------------~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV 181 (289)
||. ...+ .. .+.. ..++++|+++|+..... ..+.+.++|++||++.|++.+++++||
T Consensus 81 HD~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~ld~~~~~~-----~~~~~~~~~~~wl~~~l~~~~~~~~iv 153 (274)
T 3d03_A 81 HDD-KALFLEYLQPLCPQLGSDANNMRCAV-DDFATRLLFIDSSRAGT-----SKGWLTDETISWLEAQLFEGGDKPATI 153 (274)
T ss_dssp TSC-HHHHHHHHGGGSGGGCSCGGGCCEEE-CSSSSEEEECCCCCTTC-----SSBCCCHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCC-HHHHHHHhhhhhcCcccCCCceEEEE-EeCCEEEEEEeCCCCCC-----CCCeeCHHHHHHHHHHHHhCCCCCEEE
Confidence 993 2111 00 0111 23569999999975431 224677899999999999877779999
Q ss_pred EeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCC---------Cccc
Q 022941 182 VGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGN---------GREM 250 (289)
Q Consensus 182 ~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~---------g~~~ 250 (289)
++|||++..+............+.+.++++++ +|+++||||+|.+. ...+|+.++++++++..+. ....
T Consensus 154 ~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~ 233 (274)
T 3d03_A 154 FMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLS 233 (274)
T ss_dssp EESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCC
T ss_pred EECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccccccccC
Confidence 99999987653211111112356788999999 89999999999965 5567888888877654321 1235
Q ss_pred CCcEEEEEEeCcEEEEEEEcC
Q 022941 251 VDGFLLHKVSSLEILTYFVTL 271 (289)
Q Consensus 251 ~~gf~~v~v~~~~i~~~~~~~ 271 (289)
++||+++++++++++++++..
T Consensus 234 ~~gy~i~~i~~~~~~~~~~~~ 254 (274)
T 3d03_A 234 PASCLMHRQVGEQWVSYQHSL 254 (274)
T ss_dssp CCEEEEEEEETTEEEEEEEEC
T ss_pred CCceEEEEEeCCcEEEEEEec
Confidence 789999999999999888765
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.95 E-value=1.2e-27 Score=214.52 Aligned_cols=222 Identities=14% Similarity=0.113 Sum_probs=154.0
Q ss_pred CCCCccEEEEEEeCCCCCCh---------hHHHHHHHHHHHHh-hCCccEEEEcCCCCCCCh--hhhhhhccC----CCC
Q 022941 44 NRKGLDFYFISVTGGFRPLE---------QQTLLLKQMEDVAK-SYDARFVINTSELGEDDP--LKQNATWLF----PSL 107 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~---------~~~~~~~~l~~~~~-~~~pdfvv~~GD~~~~~~--~~~~~~~~~----~~l 107 (289)
+....+++|+++||.|.+.. ....+.+.+..+.+ ..+||+||++||+..... .|+...+.+ +.+
T Consensus 20 ~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 20 EHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp SSCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 34567899999999775321 23334444444333 268999999999865432 333333333 334
Q ss_pred CCCeEEecCCCcCCCCceeEeE-----------eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 022941 108 KVPWYTTKASKEKEVGCFQEQI-----------RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNG 176 (289)
Q Consensus 108 ~~P~~~v~GNHD~~~~~~~~~~-----------~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~ 176 (289)
++|++.++|||| +...+.+.+ .....++++|+++|+.... ...+.+..+|++||++.|+....
T Consensus 100 ~~pv~~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~-----~~~~~~~~~q~~wl~~~l~~~~~ 173 (330)
T 3ib7_A 100 GAELVWVMGNHD-DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPG-----HHHGEIRASQLGWLAEELATPAP 173 (330)
T ss_dssp TCEEEECCCTTS-CHHHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTT-----CCSBCCCHHHHHHHHHHTTSCCT
T ss_pred CCCEEEeCCCCC-CHHHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCC-----CCCCccCHHHHHHHHHHHHhccc
Confidence 899999999999 432211100 0111356899999997532 12346789999999999998877
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCC-----CC---
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESG-----NG--- 247 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~-----~g--- 247 (289)
+++|+++|||++...............+.+.+++++++|+++||||+|... ...+|+.++.+|+.+... .|
T Consensus 174 ~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~ 253 (330)
T 3ib7_A 174 DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTR 253 (330)
T ss_dssp TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCC
T ss_pred CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCccee
Confidence 789999999998765431111112235788899999999999999999965 667899999998876541 11
Q ss_pred -cccCCcEEEEEEeCcEEEEEEEcC
Q 022941 248 -REMVDGFLLHKVSSLEILTYFVTL 271 (289)
Q Consensus 248 -~~~~~gf~~v~v~~~~i~~~~~~~ 271 (289)
....+||.++++++++++++++..
T Consensus 254 ~~~~~~gy~iv~i~~~~~~~~~v~~ 278 (330)
T 3ib7_A 254 GRDGAQGCNLVHVYPDTVVHSVIPL 278 (330)
T ss_dssp EESCSCEEEEEEECSSCEEEEEEEC
T ss_pred ccCCCCceEEEEEECCCeEEEEecc
Confidence 245689999999999999999874
No 7
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.94 E-value=5.8e-27 Score=208.63 Aligned_cols=218 Identities=10% Similarity=0.049 Sum_probs=148.3
Q ss_pred CccEEEEEEeCCCCCChh----------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--------hhhhhhc
Q 022941 47 GLDFYFISVTGGFRPLEQ----------------QTLLLKQMEDVAKSYDARFVINTSELGEDDP--------LKQNATW 102 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~----------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--------~~~~~~~ 102 (289)
+..++|++++|.|.+... ...+.+.+..+ ++.+||+||++||+..... .++...+
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~ 81 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW-RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMA 81 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHH-HHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHH-HhcCCCEEEECCCccCCCCCcchHHHHHHHHHHH
Confidence 467999999997765411 12333334433 3478999999999865432 2222334
Q ss_pred cCCCCCCCeEEecCCCcCCC---CceeEeE-------------eCC---------C-CCeEEEEEEcCCCccCCC-----
Q 022941 103 LFPSLKVPWYTTKASKEKEV---GCFQEQI-------------RLP---------H-GEALDIIGVNTGSLQGKI----- 151 (289)
Q Consensus 103 ~~~~l~~P~~~v~GNHD~~~---~~~~~~~-------------~~p---------~-~~~~~~i~lDt~~~~~~~----- 151 (289)
.+..+++|+++++||||.+. ..+.+.+ .+| . .++++||++|+..+...-
T Consensus 82 ~l~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~ 161 (322)
T 2nxf_A 82 ELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEES 161 (322)
T ss_dssp HHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTS
T ss_pred HHHhcCCcEEEecCCCCcccCCHHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceecccccCCCC
Confidence 55667899999999999421 0110000 011 1 267899999997642100
Q ss_pred --------------CC-----CC-------------CCCcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchh
Q 022941 152 --------------PT-----AL-------------PSASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQL 197 (289)
Q Consensus 152 --------------~~-----~~-------------~~~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~ 197 (289)
+. .+ .+.+.++|++||+++|++++ .+++||++|||++...... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~--~ 239 (322)
T 2nxf_A 162 EKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADP--I 239 (322)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCG--G
T ss_pred hhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCCc--c
Confidence 00 00 13567899999999999875 5689999999998766421 0
Q ss_pred hHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ec-CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 198 EAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SR-QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 198 ~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~-~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
......+.+.++++++ +|+++||||+|.+. .. .+|++|+++|+.... .....||.++++++++++++.++
T Consensus 240 ~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~---~~~~~~y~~v~~~~~~~~~~~~~ 312 (322)
T 2nxf_A 240 CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET---PPHSHAFATAYLYEDRMVMKGRG 312 (322)
T ss_dssp GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC---CTTSCEEEEEEECSSEEEEEEEE
T ss_pred ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhC---CCCCCcEEEEEEECCeEEEEecc
Confidence 1111356788999999 79999999999966 44 789999998887432 23568999999999999998875
No 8
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.93 E-value=3.5e-25 Score=207.06 Aligned_cols=220 Identities=10% Similarity=0.024 Sum_probs=141.0
Q ss_pred CCCccEEEEEEeCCCCCChh----------------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQ----------------------QTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNA 100 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~----------------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~ 100 (289)
..+..++|++++|.|.+... .....+.+.+.++..+||+||++||+..... .++..
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~ 114 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEEL 114 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHH
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 35678999999998765321 1233333333344568999999999865332 33333
Q ss_pred hccCCC---CCCCeEEecCCCcCCCCceeE-------------------------------------eEeCCCCCeEEEE
Q 022941 101 TWLFPS---LKVPWYTTKASKEKEVGCFQE-------------------------------------QIRLPHGEALDII 140 (289)
Q Consensus 101 ~~~~~~---l~~P~~~v~GNHD~~~~~~~~-------------------------------------~~~~p~~~~~~~i 140 (289)
.+.+.. .++|+++++||||...+.... .+.....++++++
T Consensus 115 ~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 115 AKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 333333 378999999999943221100 0000114679999
Q ss_pred EEcCCCccCC---CCCCCCCCcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCC
Q 022941 141 GVNTGSLQGK---IPTALPSASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGV 215 (289)
Q Consensus 141 ~lDt~~~~~~---~~~~~~~~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V 215 (289)
+||+...... .+....+.+.++|++||++.|++.+ ..++||++|||++...............+.+.+++++++|
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 9999864321 0111224677899999999998764 3578999999998754321000111235678899999999
Q ss_pred eEEEeCCCccce-e---cCCC--eEEEecCCCCCCCCCcccCCcEEEEEEeCcE--EEEEEEc
Q 022941 216 NTYLSKHGCIKY-S---RQDS--ITYMENPGLIESGNGREMVDGFLLHKVSSLE--ILTYFVT 270 (289)
Q Consensus 216 ~~vl~GH~H~~~-~---~~~g--i~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~--i~~~~~~ 270 (289)
+++||||.|.+. . ..+| +..+.+|+.+ ..+.+|.+++++++. ++++.+.
T Consensus 275 ~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~------~~p~~y~il~i~~~~~~~~~~~~~ 331 (443)
T 2xmo_A 275 DFSLSGHIHTQNIRSAKSTDGKEITDIVTNALS------VFPHKYGNITYSAKNKNFTYQSQK 331 (443)
T ss_dssp CEEEECSSCSCEEEEEECTTSCEEEEEECCCTT------STTCEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEECCcccCchhhcccCCCCceEEEEcCccc------cCCCCeEEEEEeCCCceEEEEEEE
Confidence 999999999955 2 1233 4555555543 246899999999876 6666654
No 9
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=99.83 E-value=6.9e-20 Score=174.46 Aligned_cols=216 Identities=10% Similarity=0.067 Sum_probs=138.1
Q ss_pred CccEEEEEEeCCCC--CChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-----------------------hhhhhh
Q 022941 47 GLDFYFISVTGGFR--PLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-----------------------LKQNAT 101 (289)
Q Consensus 47 ~~~~~f~~~gD~~~--g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-----------------------~~~~~~ 101 (289)
..+++|+++||.+. |.. . ++..++ +.+|||||++||+...+. .|+..|
T Consensus 114 ~~~~rfa~~sc~~~~~g~~---~---~~~~ia-~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y 186 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGYY---T---AYKHMA-KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRH 186 (527)
T ss_dssp CCCEEEEEECCCCGGGCCC---H---HHHHHT-TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHH
T ss_pred CCCeEEEEEecCCCCCCcc---H---HHHHHH-hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHH
Confidence 47899999999443 221 1 222233 368999999999743211 122222
Q ss_pred ccC---CCC-----CCCeEEecCCCcCCCCceeE----------------------eE-eCC-------C----------
Q 022941 102 WLF---PSL-----KVPWYTTKASKEKEVGCFQE----------------------QI-RLP-------H---------- 133 (289)
Q Consensus 102 ~~~---~~l-----~~P~~~v~GNHD~~~~~~~~----------------------~~-~~p-------~---------- 133 (289)
..+ +.+ .+|++++.|||| +..++.. .| .+| .
T Consensus 187 ~~~~~dp~lq~~~a~~P~i~~wDDHE-~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf 265 (527)
T 2yeq_A 187 AQYRSDANLKAAHAAFPWVVTWDDHE-VENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHF 265 (527)
T ss_dssp HHHHTCHHHHHHHHHSEEEECCCSTT-TSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEE
T ss_pred HHHhCCHHHHHHHhcCCEEEeccccc-ccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEE
Confidence 211 112 589999999999 4333210 01 122 1
Q ss_pred -CCe-EEEEEEcCCCccCCCC-------------CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccc-----
Q 022941 134 -GEA-LDIIGVNTGSLQGKIP-------------TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEH----- 193 (289)
Q Consensus 134 -~~~-~~~i~lDt~~~~~~~~-------------~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~----- 193 (289)
.+. ++|++|||..+..... +.....++++|++||+++|++++++|+||++|+|++.....
T Consensus 266 ~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s~~p~~~~~~~~g~~~ 345 (527)
T 2yeq_A 266 TYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASP 345 (527)
T ss_dssp EETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHCCSSEEEEECSSCCSCCCSSCSSSC
T ss_pred EcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcCCCCeEEEEeCCcccccccCCCccc
Confidence 134 8999999986543211 01123578999999999999998999999999999876421
Q ss_pred ----cchhhHHhhHHHHHHHHHHhCC--eEEEeCCCccce-e--c-C-----C---CeEEEecCCCCCCC-----C----
Q 022941 194 ----EEQLEAKKIYEPLHHIFMKFGV--NTYLSKHGCIKY-S--R-Q-----D---SITYMENPGLIESG-----N---- 246 (289)
Q Consensus 194 ----~~~~~~~~~~~~l~~ll~~~~V--~~vl~GH~H~~~-~--~-~-----~---gi~~i~~g~~~~~~-----~---- 246 (289)
..+......+++|+++|.+++| .++||||.|.+. . . . . ++.|++++-.+... .
T Consensus 346 ~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~ 425 (527)
T 2yeq_A 346 IYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQ 425 (527)
T ss_dssp CEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHH
T ss_pred ccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhh
Confidence 1111223458899999999998 499999999965 1 1 1 1 46666543222110 0
Q ss_pred -----C----cccCCcEEEEEEeCcEEEEEEEc
Q 022941 247 -----G----REMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 247 -----g----~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
. .....||.+++++++++.++++.
T Consensus 426 ~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~ 458 (527)
T 2yeq_A 426 ILKENPHIQFFNDYRGYVRCTVTPHQWKADYRV 458 (527)
T ss_dssp HHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEE
T ss_pred hhhcCCcceeeeCCCCEEEEEEeccEEEEEEEE
Confidence 0 12478999999999999998875
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.77 E-value=4.1e-18 Score=144.23 Aligned_cols=196 Identities=10% Similarity=-0.029 Sum_probs=114.8
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h--hhhhhhccCCCCCCCeEEecCCCcCCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-P--LKQNATWLFPSLKVPWYTTKASKEKEVGC 124 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~--~~~~~~~~~~~l~~P~~~v~GNHD~~~~~ 124 (289)
..+|++++||.|.+... .+.+.+.+++.+||+||++||+.... . .+.+..+.+.++++|+++++||||.....
T Consensus 4 ~~mri~~iSD~H~~~~~----~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~ 79 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEA----LEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWE 79 (228)
T ss_dssp CCCEEEEEECCTTCHHH----HHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHH
T ss_pred ceEEEEEEeeccCCHHH----HHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhHH
Confidence 35899999998865322 22222233345899999999986543 1 23333455566688999999999943211
Q ss_pred -eeE----------eEeCCC-----CCeEEEEEEcCCCccC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccc
Q 022941 125 -FQE----------QIRLPH-----GEALDIIGVNTGSLQG-KIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPL 187 (289)
Q Consensus 125 -~~~----------~~~~p~-----~~~~~~i~lDt~~~~~-~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~ 187 (289)
+.+ .+.+.. .+++.++++++..... .+...........+.+|+++.|++..+.+.|+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~ 159 (228)
T 1uf3_A 80 YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159 (228)
T ss_dssp HHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCB
T ss_pred HHHhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCCCCeEEEEccCc
Confidence 000 011111 1267888887542111 00000000111223344555555554568999999999
Q ss_pred cccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeC
Q 022941 188 VICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIESGNGREMVDGFLLHKVSS 261 (289)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~ 261 (289)
+..... .. ....+.++++++++++++|||+|......+++.++.+|+.+ ..+|.++++++
T Consensus 160 ~~~~~~--~~----~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~in~Gs~~--------~~~~~i~~~~~ 219 (228)
T 1uf3_A 160 YHKGLN--EQ----GSHEVAHLIKTHNPLLVLVAGKGQKHEMLGASWVVVPGDLS--------EGEYSLLDLRA 219 (228)
T ss_dssp CBTTTB--TT----SBHHHHHHHHHHCCSEEEECCSSCEEEEETTEEEEECCBGG--------GTEEEEEETTT
T ss_pred ccCCcc--cc----CHHHHHHHHHHhCCCEEEEcccccCccccCCceEEEecccC--------CCceEEEEecc
Confidence 764211 00 12356678888999999999999422344567666655542 46899999876
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.76 E-value=1.5e-17 Score=144.00 Aligned_cols=206 Identities=7% Similarity=0.001 Sum_probs=115.9
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChh-----------------------------hhh
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPL-----------------------------KQN 99 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~-----------------------------~~~ 99 (289)
.+||+++||.|.+...-.++.+ .++..+||+||++||+...... +.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~----~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKG----VIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHH----HHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHH----HHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHH
Confidence 5799999998876533222222 2334589999999999764432 111
Q ss_pred hhccCCCCCCCeEEecCCCcCCCCc----e-eE-e-----EeC-----CCCCeEEEEEEcCCCccCCCCCCCCCC-cHHH
Q 022941 100 ATWLFPSLKVPWYTTKASKEKEVGC----F-QE-Q-----IRL-----PHGEALDIIGVNTGSLQGKIPTALPSA-SGDL 162 (289)
Q Consensus 100 ~~~~~~~l~~P~~~v~GNHD~~~~~----~-~~-~-----~~~-----p~~~~~~~i~lDt~~~~~~~~~~~~~~-~~~~ 162 (289)
..+.+..+++|+++++||||.+... . .. . ..+ ..-++++|++++.......+....... ....
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWY 160 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHH
T ss_pred HHHHHHhcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhh
Confidence 2233445578999999999943211 0 00 0 000 011357788887543211110000000 0011
Q ss_pred HHHHHHHHHhhcCCCeEEEEeeccccccccccc-hhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCC
Q 022941 163 LLNWLKSALEATNGQWCIVVGFHPLVICEEHEE-QLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPG 240 (289)
Q Consensus 163 Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~-~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~ 240 (289)
..+|| +.|++.+....|+++|+|++....... ........+.+.++++++++++++|||+| .. ...+++.++.+|+
T Consensus 161 ~~~~l-~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in~Gs 238 (260)
T 2yvt_A 161 VEYIL-KFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVNPGE 238 (260)
T ss_dssp HHHHG-GGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEECCB
T ss_pred HHHHH-HHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEeCCC
Confidence 12455 445544445789999999875311100 00000112456778889999999999999 43 3345666666555
Q ss_pred CCCCCCCcccCCcEEEEEEeCcEEEEEE
Q 022941 241 LIESGNGREMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 241 ~~~~~~g~~~~~gf~~v~v~~~~i~~~~ 268 (289)
.+. .+|.+++++++++++.-
T Consensus 239 ~~~--------g~~~ii~~~~~~~~~~~ 258 (260)
T 2yvt_A 239 FEE--------GRYAFLDLTQHKIKLEQ 258 (260)
T ss_dssp GGG--------TEEEEEETTTTEEEEEE
T ss_pred CCC--------CceEEEEEcCCEEEeee
Confidence 421 38999999888777653
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.72 E-value=6e-17 Score=145.98 Aligned_cols=231 Identities=9% Similarity=-0.017 Sum_probs=129.7
Q ss_pred CCccEEEEEEeCCCCC----C--------hhHHHHHHHHHHHHhhCCccEEEEcCC-CCCCCh---h-hhhhhccCCCCC
Q 022941 46 KGLDFYFISVTGGFRP----L--------EQQTLLLKQMEDVAKSYDARFVINTSE-LGEDDP---L-KQNATWLFPSLK 108 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g----~--------~~~~~~~~~l~~~~~~~~pdfvv~~GD-~~~~~~---~-~~~~~~~~~~l~ 108 (289)
....+||++++|.|.| . ..+....+.+.+.+++.+||+||++|| +..... . .+...+.+..+.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4578999999998866 2 123455556656666679999999999 754221 1 122233444443
Q ss_pred --CCeEEecCCCcCCCCc----eeE--e--EeC-----------CCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHH
Q 022941 109 --VPWYTTKASKEKEVGC----FQE--Q--IRL-----------PHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWL 167 (289)
Q Consensus 109 --~P~~~v~GNHD~~~~~----~~~--~--~~~-----------p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL 167 (289)
+|+++++||||....+ +.+ . +.+ ..++++.+++++...... . .........+|++|+
T Consensus 95 ~~~pv~~i~GNHD~~~~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~-~-~~~~~~~~~~~~~~~ 172 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESE-A-LRKNEGDFRFFLESR 172 (336)
T ss_dssp HHSCEEECCC------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC---------CCSSHHHHHHHHH
T ss_pred hcCCEEEECCCCCccccccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHH-H-HHHhhHHHHHHHHHH
Confidence 8999999999933200 000 0 111 113467777775432110 0 000123456789999
Q ss_pred HHHHhh---cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCC
Q 022941 168 KSALEA---TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIE 243 (289)
Q Consensus 168 ~~~L~~---~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~ 243 (289)
.+.|.. .++.+.|+++|+|+....... +...-....+...+.+.++|++++||.|... ... +...+.+|+...
T Consensus 173 ~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~--~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-~~~i~y~GS~~~ 249 (336)
T 2q8u_A 173 LNKLYEEALKKEDFAIFMGHFTVEGLAGYA--GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-QPLTIYPGSLIR 249 (336)
T ss_dssp HHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEEEEE-TTEEEECCCSSC
T ss_pred HHHHHHhccCCCCCEEEEECccccCCCCCC--CccchhhcccCHHHccccCCEEEEccccCceEeCC-CccEEECCCCcC
Confidence 888875 345689999999987533210 0000000001011334689999999999955 322 233444555432
Q ss_pred CCCC-cccCCcEEEEEEeCc-EEEEEEEcCCCcEEEEEEE
Q 022941 244 SGNG-REMVDGFLLHKVSSL-EILTYFVTLEGEVVYRTAT 281 (289)
Q Consensus 244 ~~~g-~~~~~gf~~v~v~~~-~i~~~~~~~~g~~~~~~~i 281 (289)
...+ .....||.+++++++ .++++++....+.+.++++
T Consensus 250 ~s~~e~~~~~~~~lv~i~~~~~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 250 IDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp CSGGGTTCCCEEEEEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred CCccccCCCCEEEEEEEeCCCccEEEEEECCCEEEEEeec
Confidence 2111 224789999999976 4888888876677777665
No 13
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.70 E-value=4.4e-16 Score=127.55 Aligned_cols=165 Identities=10% Similarity=-0.026 Sum_probs=110.6
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEe
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
..+++++||.|. . ...+.+.+.. .+. ++|+|+++||+.. +.+..+..|++.|+|||| +...
T Consensus 6 ~m~i~~isD~H~-~--~~~~~~~~~~-~~~-~~d~i~~~GD~~~---------~~l~~l~~~~~~v~GNhD-~~~~---- 66 (176)
T 3ck2_A 6 KQTIIVMSDSHG-D--SLIVEEVRDR-YVG-KVDAVFHNGDSEL---------RPDSPLWEGIRVVKGNMD-FYAG---- 66 (176)
T ss_dssp CEEEEEECCCTT-C--HHHHHHHHHH-HTT-TSSEEEECSCCCS---------CTTCGGGTTEEECCCTTC-CSTT----
T ss_pred CcEEEEEecCCC-C--HHHHHHHHHH-hhc-CCCEEEECCCCch---------HHHHhhhCCeEEecCccc-chhc----
Confidence 479999999873 2 2223333333 233 8999999999732 112222238999999999 3321
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
+|. ...+ .-...+|+++|+|++..... .+.+.+
T Consensus 67 --~p~---~~~~---------------------------------~~~~~~i~~~Hg~~~~~~~~---------~~~l~~ 99 (176)
T 3ck2_A 67 --YPE---RLVT---------------------------------ELGSTKIIQTHGHLFDINFN---------FQKLDY 99 (176)
T ss_dssp --CCS---EEEE---------------------------------EETTEEEEEECSGGGTTTTC---------SHHHHH
T ss_pred --CCc---EEEE---------------------------------EECCeEEEEECCCccCCCCC---------HHHHHH
Confidence 121 0000 01246899999998653311 134667
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEE
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTA 280 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~ 280 (289)
++++++++++++||+|.+. ...+++.++..|+.+.+..+ ....+|.+++++++++++++++.+|+++.+++
T Consensus 100 ~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~-~~~~~y~il~~~~~~~~v~~~~~~~~~~~~~~ 171 (176)
T 3ck2_A 100 WAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGT-IRECLYARVEIDDSYFKVDFLTRDHEVYPGLS 171 (176)
T ss_dssp HHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTT-CCSCCEEEEEECSSEEEEEEECTTSCBCTTCC
T ss_pred HHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCC-CCCCeEEEEEEcCCEEEEEEEEECCEEcchhh
Confidence 7788999999999999965 55678888888887654311 12389999999999999999999998877544
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.69 E-value=2.4e-16 Score=130.91 Aligned_cols=178 Identities=16% Similarity=0.171 Sum_probs=111.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
.-.+++++||.|.+.... .+.+.+.+..+..++|+|+++||+.. . +.++.+..+..|++.|+||||. ..
T Consensus 9 ~mm~i~~iSD~H~~~~~~-~~~~~l~~~~~~~~~d~ii~~GDl~~--~---~~~~~l~~~~~~~~~v~GNhD~-~~---- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCN-SLPAKFKKLLVPGKIQHILCTGNLCT--K---ESYDYLKTLAGDVHIVRGDFDE-NL---- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCS-SCCHHHHTTCCTTSCSEEEECSCCBS--H---HHHHHHHHHCSEEEECCCTTCC-CT----
T ss_pred cceEEEEEecCCCCccch-hHHHHHHHHhccCCCCEEEEcCCCCC--H---HHHHHHHhcCCCEEEEcCCcCc-cc----
Confidence 348999999977542110 11122333334467999999999864 1 2233333445689999999993 21
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHH
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLH 207 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~ 207 (289)
.+|. ...+ .-..+.|+++|.+++.... + .+.+.
T Consensus 78 --~lp~---~~~~---------------------------------~~~~~~i~l~Hg~~~~~~~-----~----~~~l~ 110 (192)
T 1z2w_A 78 --NYPE---QKVV---------------------------------TVGQFKIGLIHGHQVIPWG-----D----MASLA 110 (192)
T ss_dssp --TSCS---EEEE---------------------------------EETTEEEEEECSCCCCBTT-----C----HHHHH
T ss_pred --cCCc---ceEE---------------------------------EECCEEEEEECCCcCCCCC-----C----HHHHH
Confidence 1111 0000 0124689999955543221 1 23455
Q ss_pred HHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC--cccCCcEEEEEEeCcEEEEEEEcCCC-cE-EEEEEEe
Q 022941 208 HIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG--REMVDGFLLHKVSSLEILTYFVTLEG-EV-VYRTATR 282 (289)
Q Consensus 208 ~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g--~~~~~gf~~v~v~~~~i~~~~~~~~g-~~-~~~~~i~ 282 (289)
.++++.+++++++||+|... ...+++.++.+|+.+.++.. ....++|.++++++++++++++..++ ++ +.+.+.+
T Consensus 111 ~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~ 190 (192)
T 1z2w_A 111 LLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 190 (192)
T ss_dssp HHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEc
Confidence 67777899999999999965 55678989988887654211 23468999999999999999988654 33 4444444
Q ss_pred c
Q 022941 283 E 283 (289)
Q Consensus 283 ~ 283 (289)
|
T Consensus 191 ~ 191 (192)
T 1z2w_A 191 K 191 (192)
T ss_dssp C
T ss_pred c
Confidence 3
No 15
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.69 E-value=6.8e-17 Score=136.75 Aligned_cols=185 Identities=10% Similarity=0.110 Sum_probs=113.8
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
+...+++++||.|.+... ..+.+.+.++.+..++|+|+++||+.. . +.++.+.++..|++.|+||||.......
T Consensus 23 ~m~m~i~~iSD~H~~~~~-~~l~~~l~~~~~~~~~D~vi~~GDl~~--~---~~l~~l~~~~~~v~~V~GNHD~~~~~~~ 96 (215)
T 2a22_A 23 DFGDLVLLIGDLKIPYGA-KELPSNFRELLATDKINYVLCTGNVCS--Q---EYVEMLKNITKNVYIVSGDLDSAIFNPD 96 (215)
T ss_dssp CCCEEEEEECCCCTTTTC-SSCCGGGHHHHHCTTCCEEEECSCCCC--H---HHHHHHHHHCSCEEECCCTTCCSCCBCC
T ss_pred ccCcEEEEEecCCCCCCh-HHHHHHHHHHHhcCCCCEEEECCCCCC--H---HHHHHHHHcCCCEEEecCCCcCcccccC
Confidence 446899999997764321 111222333334568999999999874 1 2233344455799999999993332210
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
| .+...+ +. .........+|+++|.+++.... + .+.+
T Consensus 97 -----~-------------~~~~~l---p~-------------~~~~~~~~~~i~l~Hg~~~~~~~-----~----~~~l 133 (215)
T 2a22_A 97 -----P-------------ESNGVF---PE-------------YVVVQIGEFKIGLMHGNQVLPWD-----D----PGSL 133 (215)
T ss_dssp -----G-------------GGTBCC---CS-------------EEEEEETTEEEEEECSTTSSSTT-----C----HHHH
T ss_pred -----h-------------hhHhhC---Cc-------------eEEEecCCeEEEEEcCCccCCCC-----C----HHHH
Confidence 0 000000 00 00001134689999965543221 1 2345
Q ss_pred HHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCC--CcccCCcEEEEEEeCcEEEEEEEcCC-CcE-EEEEE
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGN--GREMVDGFLLHKVSSLEILTYFVTLE-GEV-VYRTA 280 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~--g~~~~~gf~~v~v~~~~i~~~~~~~~-g~~-~~~~~ 280 (289)
..++++.+++++++||+|... ...+++.++..|+.+.++. .....++|.++++++++++++++..+ |++ +.+.+
T Consensus 134 ~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~ 212 (215)
T 2a22_A 134 EQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSE 212 (215)
T ss_dssp HHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEE
Confidence 567777899999999999965 5557888888888765421 12346899999999999999998865 443 34333
No 16
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.66 E-value=1.7e-16 Score=137.02 Aligned_cols=212 Identities=8% Similarity=-0.061 Sum_probs=117.6
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHH--hhC--CccEEEEcCCCCCCChhhhhhhccCCCCC--CCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVA--KSY--DARFVINTSELGEDDPLKQNATWLFPSLK--VPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~--~~~--~pdfvv~~GD~~~~~~~~~~~~~~~~~l~--~P~~~v~GNHD~~~~ 123 (289)
.+++++||.|... ..+.+.+..+. ... ++|+|+++||+...++.-.+..+.+.++. .|+++++||||....
T Consensus 2 m~i~~isD~H~~~---~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNL---PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCH---HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCH---HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 4799999987532 22333333332 034 79999999998754432222333333332 589999999993221
Q ss_pred ceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCeEEEEeecccccc-ccccchhhH
Q 022941 124 CFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN---GQWCIVVGFHPLVIC-EEHEEQLEA 199 (289)
Q Consensus 124 ~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~---~~~~iV~~HhP~~~~-~~~~~~~~~ 199 (289)
....... ....... ++.............+.+.++|++||++...... +...|++.|+++... ..... .
T Consensus 79 ~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~-~-- 151 (252)
T 1nnw_A 79 MSDPHAT-DPGYIDK---LELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVL-A-- 151 (252)
T ss_dssp HSCTTCS-SSGGGGG---SSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCC-S--
T ss_pred ccccccC-Ccccccc---hhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccC-C--
Confidence 1100000 0000000 0000000000000012456788999976322111 235899999988432 21100 0
Q ss_pred HhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCC
Q 022941 200 KKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLE 272 (289)
Q Consensus 200 ~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~ 272 (289)
....+.+..+++++ ++++++|||+|... ...+++.++.+|+.+.+..+ ....+|.++++++.++++..+..+
T Consensus 152 ~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~~~~~-~~~~~y~il~~~~~~v~~~~v~yd 225 (252)
T 1nnw_A 152 EQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGK-EHKATFALVDVDTLKPKFIEVEYD 225 (252)
T ss_dssp SCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSCSSS-SCCEEEEEEETTTCCEEEEEECCC
T ss_pred CCCHHHHHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccCCCCC-CCcceEEEEECCCCeEEEEEeCCC
Confidence 01124677888888 99999999999965 55678888888887654322 235789999998777777666543
No 17
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.65 E-value=2e-15 Score=138.65 Aligned_cols=212 Identities=13% Similarity=0.011 Sum_probs=118.7
Q ss_pred CCccEEEEEEeCCCCCCh------hHH---HHHHHHHHHHhhCCccEEEEcCCCCCCC-h---hhhhhhccCCCC---CC
Q 022941 46 KGLDFYFISVTGGFRPLE------QQT---LLLKQMEDVAKSYDARFVINTSELGEDD-P---LKQNATWLFPSL---KV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~------~~~---~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~---~~~~~~~~~~~l---~~ 109 (289)
....+||++++|.|.|.. ... ...+.+.+.+...+||+||++||+.... + .+....+.+..+ ++
T Consensus 17 ~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~ 96 (386)
T 3av0_A 17 RGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNI 96 (386)
T ss_dssp -CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 456799999999887642 111 2233344445567999999999985432 2 222223344333 78
Q ss_pred CeEEecCCCcCCCCc----e---e---------EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhh
Q 022941 110 PWYTTKASKEKEVGC----F---Q---------EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEA 173 (289)
Q Consensus 110 P~~~v~GNHD~~~~~----~---~---------~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~ 173 (289)
|+++++||||..... . . +.+...+++++.+++++..... ......++++|+...+.
T Consensus 97 pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~~-------~~~~~~~~l~~l~~~~~- 168 (386)
T 3av0_A 97 KVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKS-------KREEMLDKLKNFESEAK- 168 (386)
T ss_dssp EEEECCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCST-------THHHHHHHHHHHHHHHH-
T ss_pred cEEEEcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCHH-------HHHHHHHHHHHhhhhcc-
Confidence 999999999943211 0 0 0011112244666666543210 00111234444444332
Q ss_pred cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcc---
Q 022941 174 TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGRE--- 249 (289)
Q Consensus 174 ~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~--- 249 (289)
...+.|+++|+|+...... .. .... . .+. ++|++++||.|... ...++..++.+|+......+..
T Consensus 169 -~~~~~Ill~H~~~~~~~~~-~~--~~~~-~----~l~--~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~~~~e~~~~ 237 (386)
T 3av0_A 169 -NYKKKILMLHQGINPYIPL-DY--ELEH-F----DLP--KFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDY 237 (386)
T ss_dssp -TCSSEEEEECCCCTTTSSS-SC--SSCG-G----GSC--CCSEEEECSCCSCEEEECSSSEEEECCCSSCCSGGGTHHH
T ss_pred -cCCCEEEEECcCccccCCC-Cc--ccCH-H----Hhh--hCCeEEccCCCCCccccCCCceEEECCcccccCcchhccc
Confidence 3468999999998542211 00 0000 0 122 39999999999964 3445566666676543321111
Q ss_pred --cCCcEEEEEEeC---cEEEEEEEcCCCcEE
Q 022941 250 --MVDGFLLHKVSS---LEILTYFVTLEGEVV 276 (289)
Q Consensus 250 --~~~gf~~v~v~~---~~i~~~~~~~~g~~~ 276 (289)
...||.++++++ +.++++++....+.+
T Consensus 238 ~~~~kg~~lv~i~~~~~~~~~v~~i~l~~r~~ 269 (386)
T 3av0_A 238 KKEGKGFYLVDFSGNDLDISDIEKIDIECREF 269 (386)
T ss_dssp HHHCSEEEEEECCSSSCCGGGEEEEECCCCCE
T ss_pred cCCCCEEEEEEEecCcCCCceEEEEECCccee
Confidence 468999999987 667778877755554
No 18
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.63 E-value=8.8e-15 Score=121.38 Aligned_cols=164 Identities=9% Similarity=-0.018 Sum_probs=99.7
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
.+.+|++++||.|. . ...+.+.+. ..+..++|+|+++||+... +..+.+.+++.|+++|+||||.....+.
T Consensus 23 ~g~m~i~~iSD~Hg-~--~~~l~~~l~-~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l~~~~~~V~GNhD~~~~~~~ 93 (190)
T 1s3l_A 23 QGHMKIGIMSDTHD-H--LPNIRKAIE-IFNDENVETVIHCGDFVSL-----FVIKEFENLNANIIATYGNNDGERCKLK 93 (190)
T ss_dssp ---CEEEEECCCTT-C--HHHHHHHHH-HHHHSCCSEEEECSCCCST-----HHHHHGGGCSSEEEEECCTTCCCHHHHH
T ss_pred cCCeEEEEEeeCCC-C--HHHHHHHHH-HHhhcCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEeCCCcchHHHHH
Confidence 34489999999873 2 223333333 3445789999999998642 2334444567899999999993221110
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
+ +..|.+-. .|+.....-.....+|++.|.|++. +
T Consensus 94 ~-~~~~~~~~----------------------------~l~~~~~~~~~~~~~ill~Hg~~~~----------------l 128 (190)
T 1s3l_A 94 E-WLKDINEE----------------------------NIIDDFISVEIDDLKFFITHGHHQS----------------V 128 (190)
T ss_dssp H-HHHHHCTT----------------------------CEEESEEEEEETTEEEEEEESCCHH----------------H
T ss_pred H-HhcccChh----------------------------hhcccceEEeeCCcEEEEECCChHH----------------H
Confidence 0 00000000 0000000001135789999998743 2
Q ss_pred HHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEE
Q 022941 207 HHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTY 267 (289)
Q Consensus 207 ~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~ 267 (289)
.+.+.+. +++++++||+|... ...+++.++.+|+.+. . ....++|.+++++++++++.
T Consensus 129 ~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r--~~~~~~y~il~~~~~~v~~~ 188 (190)
T 1s3l_A 129 LEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y--LTGIPTIGILDTEKKEYREI 188 (190)
T ss_dssp HHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T--TTSCCEEEEEETTTTEEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c--CCCCCEEEEEEcCCCcEEEE
Confidence 2345565 99999999999965 5567888888888765 3 22468999999988876654
No 19
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.56 E-value=1.3e-15 Score=131.40 Aligned_cols=196 Identities=9% Similarity=-0.037 Sum_probs=113.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
...|++++||.|.. ...+.+.+..+ . ++|.++++||+....+.-.+..+.+..++ +++.++||||.+......
T Consensus 2 ~~mri~~isDiHg~---~~~l~~~l~~~-~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~ 74 (246)
T 3rqz_A 2 NAMRILIISDVHAN---LVALEAVLSDA-G--RVDDIWSLGDIVGYGPRPRECVELVRVLA-PNISVIGNHDWACIGRLS 74 (246)
T ss_dssp CCCCEEEECCCTTC---HHHHHHHHHHH-C--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-SSEECCCHHHHHHTCCCC
T ss_pred CCcEEEEEeecCCC---HHHHHHHHHhc-c--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-CCEEEeCchHHHHhccCC
Confidence 34789999998742 22332333322 2 89999999998755443233333333333 269999999943221100
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccc-cccchhhHHhhHHHH
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICE-EHEEQLEAKKIYEPL 206 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~-~~~~~~~~~~~~~~l 206 (289)
. .. .+... .... ......+..++++||++...... ...+++.|.++.... ... . ....+
T Consensus 75 ~------~~-----~~~~~-~~~~-~~~~~~l~~~~~~~L~~lp~~~~-~~~i~~~Hg~p~~~~~~~~--~----~~~~~ 134 (246)
T 3rqz_A 75 L------DE-----FNPVA-RFAS-YWTTMQLQAEHLQYLESLPNRMI-DGDWTVVHGSPRHPIWEYI--Y----NARIA 134 (246)
T ss_dssp C------C-------CGGG-GCHH-HHHHHHCCHHHHHHHHHCCSEEE-ETTEEEESSCSSSTTTCCC--C----SHHHH
T ss_pred c------cc-----cCHHH-HHHH-HHHHHHcCHHHHHHHHhCCcEEE-ECCEEEEECCcCCcccccc--C----ChHHH
Confidence 0 00 00000 0000 00012456789999985322211 125888998876543 110 0 12456
Q ss_pred HHHHHHhCCeEEEeCCCccce-ec---------------------CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEE
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SR---------------------QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEI 264 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~---------------------~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i 264 (289)
.+++++++++++||||+|.+. .. ..+..++..||.+.+..| ....+|.+++.++.++
T Consensus 135 ~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg-~p~A~Y~i~d~~~~~v 213 (246)
T 3rqz_A 135 ALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDG-DPRASYAIFEPDAQRV 213 (246)
T ss_dssp HHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSS-CCSEEEEEEEGGGTEE
T ss_pred HHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCCCCc-CCcceEEEEECCCCEE
Confidence 678889999999999999855 22 235667777887765422 3346899999988878
Q ss_pred EEEEEcC
Q 022941 265 LTYFVTL 271 (289)
Q Consensus 265 ~~~~~~~ 271 (289)
+++.+.-
T Consensus 214 ~~~rv~Y 220 (246)
T 3rqz_A 214 TFHRVEY 220 (246)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 7776643
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.55 E-value=8.3e-15 Score=128.11 Aligned_cols=209 Identities=7% Similarity=-0.088 Sum_probs=120.0
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCce
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCF 125 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~ 125 (289)
.-...|++++||.|.. ..++.+.+.. ++..++|.|+++||+...++...+..+.+.+++ |+++|+||||.+....
T Consensus 8 ~~~~~~i~~iSDiHg~---~~~l~~vl~~-~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~ 82 (270)
T 3qfm_A 8 HMDMTKIALLSDIHGN---TTALEAVLAD-ARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDSLWHG 82 (270)
T ss_dssp ---CEEEEEECCCTTC---HHHHHHHHHH-HHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHHHHHH
T ss_pred cccccEEEEEecCCCC---HHHHHHHHHH-HHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHHHHHh
Confidence 4578999999998742 2333333333 344689999999998765443334444444443 7899999999321110
Q ss_pred e-EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhc--C-CCeEEEEeeccccccccccchhhHHh
Q 022941 126 Q-EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEAT--N-GQWCIVVGFHPLVICEEHEEQLEAKK 201 (289)
Q Consensus 126 ~-~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~--~-~~~~iV~~HhP~~~~~~~~~~~~~~~ 201 (289)
. ..+.+.. .....+-....+ ....+.+++++||++--... . ....|++.|.++...... ......
T Consensus 83 ~~~~~~~~~--~~~~~~~~~~~~-------~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~--~~~~~~ 151 (270)
T 3qfm_A 83 VRKELDSTR--PSQRYLLRQCQY-------VLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGR--ELIHTG 151 (270)
T ss_dssp HTTCSCTTS--HHHHHHHHHHHH-------HHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSS--TTSTTC
T ss_pred hccccCCCc--HHHHHHHHHHHH-------HHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCc--eecCCC
Confidence 0 0000000 000000000000 01246678899988532211 1 345788899776543211 001111
Q ss_pred hHHHHHHHHHHhCCeEEEeCCCccce-ec-CCCeEEEecCCCCCCCCCc-----ccCCcEEEEEEeCcE-EEEEEEc
Q 022941 202 IYEPLHHIFMKFGVNTYLSKHGCIKY-SR-QDSITYMENPGLIESGNGR-----EMVDGFLLHKVSSLE-ILTYFVT 270 (289)
Q Consensus 202 ~~~~l~~ll~~~~V~~vl~GH~H~~~-~~-~~gi~~i~~g~~~~~~~g~-----~~~~gf~~v~v~~~~-i~~~~~~ 270 (289)
..+.+..++++.+++++++||+|... .. .+++.++..|+.+.+..+. ....+|.++++++++ ++++++.
T Consensus 152 ~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 152 KQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp CHHHHHHTTTTTTCSEEECCSSCSEEEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEE
T ss_pred cHHHHHHHhcccCCCEEEECCcCchHheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEE
Confidence 23456677777899999999999865 44 4788899999988765432 236789999999875 4666653
No 21
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.55 E-value=3.5e-14 Score=130.02 Aligned_cols=221 Identities=10% Similarity=0.029 Sum_probs=122.2
Q ss_pred EEEEEEeCCCCCCh------------hHHHHHHHHHHHHhhCCccEEEEcCCCC-CCC-h---hhhhhhcc---CCCCCC
Q 022941 50 FYFISVTGGFRPLE------------QQTLLLKQMEDVAKSYDARFVINTSELG-EDD-P---LKQNATWL---FPSLKV 109 (289)
Q Consensus 50 ~~f~~~gD~~~g~~------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~-~~~-~---~~~~~~~~---~~~l~~ 109 (289)
+||++++|.|.|.. .+....+.+.+.+...+||+||++||+. ... + .++...+. +... +
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 48999999776653 1234445555556677999999999987 321 1 12222222 2333 8
Q ss_pred CeEEecCCCcCCCCce-----e----Ee---------EeCC--CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHH
Q 022941 110 PWYTTKASKEKEVGCF-----Q----EQ---------IRLP--HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKS 169 (289)
Q Consensus 110 P~~~v~GNHD~~~~~~-----~----~~---------~~~p--~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~ 169 (289)
|++.++|||| +.+.. . .. +.+. .+..+.++++...... ........++.+|+.+
T Consensus 80 ~v~~i~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~-----~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 80 PVVVLPGNQD-WKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES-----EALRKNEGDFRFFLES 153 (379)
T ss_dssp CEEECCCTTS-CTTHHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC---------CHHHHHHHHHHH
T ss_pred CEEEEcCCCc-cccCccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCCHH-----HHhhhhccchHHHHHH
Confidence 9999999999 44311 0 00 0111 1224555555322100 0011355678899999
Q ss_pred HHh----hc--CCCeEEEEeecccccccc-ccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 170 ALE----AT--NGQWCIVVGFHPLVICEE-HEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 170 ~L~----~~--~~~~~iV~~HhP~~~~~~-~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
.|+ +. +..+.|+++|.++..... ... . ......+...+...++|.+++||.|... ....+ ..+-+|+.
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~s--e-~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~~~~-~i~y~GS~ 229 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGI--E-QGREIIINRALIPSVVDYAALGHIHSFREIQKQP-LTIYPGSL 229 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC----------CSCCBCGGGSCTTSSEEEEESCSSCEEEEETT-EEEECCCS
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCC--c-cccccccCHHHcCcCCCEEEcccccCCeEeCCCC-cEEecCCC
Confidence 887 32 456889999999864332 100 0 0000011111224589999999999965 22212 23334543
Q ss_pred CCCCCC-cccCCcEEEEEEeCcE-EEEEEEcCCCcEEEEEEE
Q 022941 242 IESGNG-REMVDGFLLHKVSSLE-ILTYFVTLEGEVVYRTAT 281 (289)
Q Consensus 242 ~~~~~g-~~~~~gf~~v~v~~~~-i~~~~~~~~g~~~~~~~i 281 (289)
.....+ .....||.+|+++++. .+++++......+.+.+.
T Consensus 230 ~~~~f~E~~~~k~~~lv~~~~~~~~~v~~i~~~~r~~~~~~~ 271 (379)
T 3tho_B 230 IRIDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 271 (379)
T ss_dssp SCCSGGGSSSCCEEEEEECCSSSCCEEEEEECCCCCEEEEEC
T ss_pred CCCCcccccCCCEEEEEEEcCCCcceEEEeCCCCeeeEEEEc
Confidence 221111 2346899999998754 788888755555555554
No 22
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.51 E-value=9.7e-14 Score=122.15 Aligned_cols=183 Identities=10% Similarity=-0.037 Sum_probs=105.2
Q ss_pred CCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCC-CCeEEecCCCcCC
Q 022941 45 RKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLK-VPWYTTKASKEKE 121 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~-~P~~~v~GNHD~~ 121 (289)
...+.+||+++||.|..... + +-.++|+||++||+...+. +++...+.+.+++ .|+++|+||||.+
T Consensus 55 ~~~~~mri~~iSD~H~~~~~---l--------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG---I--------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELT 123 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT---C--------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGG
T ss_pred CCCCCeEEEEEeeCCCCcch---h--------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Confidence 34677999999998764421 1 1257999999999976433 3333444555554 4689999999953
Q ss_pred CCc-eeE------------------------------eEeCCC----CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHH
Q 022941 122 VGC-FQE------------------------------QIRLPH----GEALDIIGVNTGSLQGKIPTALPSASGDLLLNW 166 (289)
Q Consensus 122 ~~~-~~~------------------------------~~~~p~----~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~W 166 (289)
.+. +.+ -..+-+ -++++|++..-+++... . ....++.++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~---~---~f~~~~~~~ 197 (296)
T 3rl5_A 124 FDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNG---W---GFNLPRGQS 197 (296)
T ss_dssp GCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--C---C---TTBCCTTHH
T ss_pred cchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCC---c---CCCcchHHH
Confidence 221 000 011111 13477776444332210 0 111111223
Q ss_pred HHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHH-HHhCCeEEEeCCCccce--ecCCCeEEEecCCCCC
Q 022941 167 LKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIF-MKFGVNTYLSKHGCIKY--SRQDSITYMENPGLIE 243 (289)
Q Consensus 167 L~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll-~~~~V~~vl~GH~H~~~--~~~~gi~~i~~g~~~~ 243 (289)
+.+.....+.+..|++.|.|++.............-.+.|.+.+ ++++.+++++||.|... ...+++.++..|+.+.
T Consensus 198 ~~~~~~~ip~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~ 277 (296)
T 3rl5_A 198 LLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTV 277 (296)
T ss_dssp HHHHHTTSCTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCT
T ss_pred HHHHHhhCCCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCc
Confidence 33333334455789999999987643210000001124566666 68899999999999954 4567788888777654
Q ss_pred C
Q 022941 244 S 244 (289)
Q Consensus 244 ~ 244 (289)
.
T Consensus 278 ~ 278 (296)
T 3rl5_A 278 S 278 (296)
T ss_dssp T
T ss_pred C
Confidence 3
No 23
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.50 E-value=1.5e-14 Score=120.22 Aligned_cols=153 Identities=8% Similarity=-0.043 Sum_probs=90.8
Q ss_pred EEEEEEeCCCCCChhHH---------HHHHHHHHHHhh--CCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCC
Q 022941 50 FYFISVTGGFRPLEQQT---------LLLKQMEDVAKS--YDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~---------~~~~~l~~~~~~--~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
.+++++||.|.+..... ...+.+.+..++ .++|+|+++||+....+.++...+.+.+++.|++.|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 47899999886653321 123333333333 4899999999986543333333444555667999999999
Q ss_pred cCCCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhh
Q 022941 119 EKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLE 198 (289)
Q Consensus 119 D~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~ 198 (289)
|.....+...| . .+ .+..||+ +. ...+|+++|+|++.......
T Consensus 82 D~~~~~~~~~~------------------~---------~l--~~~~~l~----~~-~~~~i~~~H~~~~~~~~~~~--- 124 (195)
T 1xm7_A 82 DKDKESLKEYF------------------D---------EI--YDFYKII----EH-KGKRILLSHYPAKDPITERY--- 124 (195)
T ss_dssp CCCHHHHTTTC------------------S---------EE--ESSEEEE----EE-TTEEEEEESSCSSCSSCCSC---
T ss_pred CCchhhhhhhh------------------h---------ch--hHHHHHH----hc-CCcEEEEEccCCcCCCcccc---
Confidence 93211110000 0 00 0112222 11 35789999999876543211
Q ss_pred HHhhHHHHHHHHHHhCCeEEEeCCCccce-ecC----C-CeEEEecCC
Q 022941 199 AKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQ----D-SITYMENPG 240 (289)
Q Consensus 199 ~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~----~-gi~~i~~g~ 240 (289)
....+.+.+++++++++++++||+|... ... + |+.|+..|+
T Consensus 125 -~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 125 -PDRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANV 171 (195)
T ss_dssp -HHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBG
T ss_pred -cchHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeE
Confidence 1224678888999999999999999955 322 3 677766544
No 24
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.43 E-value=7.9e-13 Score=108.41 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=94.0
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
++-.+++++||.|. ..+..++.+.+.++. .++|+|+++||+... +..+.+.++..|++.|+|||| ... +.
T Consensus 20 ~~mmri~~iSD~Hg-~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~-----~~~~~l~~~~~~v~~V~GNhD-~~~-~~ 89 (178)
T 2kkn_A 20 QGVKRFLLISDSHV-PVRMASLPDEILNSL--KEYDGVIGLGDYVDL-----DTVILLEKFSKEFYGVHGNMD-YPD-VK 89 (178)
T ss_dssp --CEEEEEECCCCB-TTTTCCCCHHHHHGG--GGCSEEEESSCBSCH-----HHHHHHHHHTSSEEECCCSSS-CGG-GG
T ss_pred CcceEEEEEecccC-CCCHHHHHHHHHHHh--cCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEECCCC-cHH-HH
Confidence 34489999999873 111112222333222 579999999998642 222333334579999999999 321 00
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
. .+|.. ..+ .-...+|++.|...... ...+.+
T Consensus 90 ~--~lp~~---~~~---------------------------------~~~g~~i~l~HG~~~~~----------~~~~~~ 121 (178)
T 2kkn_A 90 E--HLPFS---KVL---------------------------------LVEGVTIGMCHGWGAPW----------DLKDRL 121 (178)
T ss_dssp G--TSCSC---EEE---------------------------------EETTEEEEECCSCCCHH----------HHHHHH
T ss_pred h--hCCcc---eEE---------------------------------EECCEEEEEECCCCCCC----------CHHHHH
Confidence 0 01110 000 00235788888653210 111223
Q ss_pred HHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
.+.++ .+++++++||+|.+. ...+++.++..|+.+. .+|.++++++++++++++.
T Consensus 122 ~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~--------~sy~il~~~~~~~~~~~~~ 177 (178)
T 2kkn_A 122 LKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE--------GSYAVLELDGGEVRFELKT 177 (178)
T ss_dssp HHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT--------TEEEEEEEETTEEEEEEEE
T ss_pred HHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC--------CeEEEEEECCCEEEEEEEe
Confidence 33444 689999999999965 5557788887766532 8999999999999888764
No 25
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.40 E-value=3e-12 Score=107.49 Aligned_cols=172 Identities=7% Similarity=0.012 Sum_probs=104.0
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh------hh--hhhhccCCCCCCCeEEecCCCcC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP------LK--QNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~------~~--~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
-.+++++||.|... ..+.+.++. .+..++|+|+++||+....+ .| ++..+.+.+++.|++.|+||||.
T Consensus 25 mmki~~iSD~H~~~---~~l~~~l~~-~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSL---PATERVLEL-FAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBH---HHHHHHHHH-HHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCH---HHHHHHHHH-HHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCch
Confidence 37999999987532 223333332 33357999999999864322 11 22334455666799999999993
Q ss_pred CCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHH
Q 022941 121 EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 121 ~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
....+... .|...... |+ .-...+|+++|.+++....
T Consensus 101 ~~~~~~~~--~~~~~~~~---------------------------~~------~~~g~~i~l~Hg~~~~~~~-------- 137 (208)
T 1su1_A 101 EVDQMLLH--FPITAPWQ---------------------------QV------LLEKQRLFLTHGHLFGPEN-------- 137 (208)
T ss_dssp HHHHHHSS--SCCCCSEE---------------------------EE------ECSSCEEEEECSSSSBTTB--------
T ss_pred HHHHhhhh--ccccCceE---------------------------EE------EECCcEEEEECCCCCCcch--------
Confidence 22111000 11100000 00 0124579999998865321
Q ss_pred hhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEEEEE
Q 022941 201 KIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRT 279 (289)
Q Consensus 201 ~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~ 279 (289)
+. . + ...+++++||+|... ...+++.++..|+.+.+.. ....+|.+++. + .+++++.+|+.+.+.
T Consensus 138 -l~----~-~--~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~pr~--~~~~sy~il~~--~--~~~~~~~~~~~~~~~ 203 (208)
T 1su1_A 138 -LP----A-L--NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKG--GNPASYGMLDN--D--VLSVIALNDQSIIAQ 203 (208)
T ss_dssp -CC----C-C--CTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCT--TCCCEEEEEET--T--EEEEEETTTCCEEEE
T ss_pred -hh----h-h--cCCCEEEECCcccCccEEeCCEEEEECCCCcCCCC--CCCCEEEEEEC--C--eEEEEEeCCCEEEEE
Confidence 00 0 1 145999999999965 4557788888888765432 23578999884 3 566777889888888
Q ss_pred EE
Q 022941 280 AT 281 (289)
Q Consensus 280 ~i 281 (289)
++
T Consensus 204 ~~ 205 (208)
T 1su1_A 204 VA 205 (208)
T ss_dssp EE
T ss_pred ec
Confidence 76
No 26
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.38 E-value=2.5e-11 Score=112.08 Aligned_cols=95 Identities=6% Similarity=-0.034 Sum_probs=60.1
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--e---cCCCeEEEecCCCCCCCCC--cc
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--S---RQDSITYMENPGLIESGNG--RE 249 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~---~~~gi~~i~~g~~~~~~~g--~~ 249 (289)
.+.|+++|......+... ... .-+...++|+++.||.|... . ..++...+-+|+.....-. ..
T Consensus 230 ~~~Ilv~H~~~~~~g~~~--~ip--------~~l~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~ 299 (431)
T 3t1i_A 230 WFNLFVIHQNRSKHGSTN--FIP--------EQFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEA 299 (431)
T ss_dssp EEEEEEECSCCSCSSSSS--SCC--------GGGSCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHH
T ss_pred ceEEEEECCCccCCCccc--cCC--------HhHhhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccC
Confidence 378999999874322210 001 11334579999999999954 2 1345666666665432111 13
Q ss_pred cCCcEEEEEEeCcEEEEEEEcCC-CcEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFVTLE-GEVVYRTAT 281 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~~~~-g~~~~~~~i 281 (289)
...||.+++++++.+.++.+..+ -+.+...++
T Consensus 300 ~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v 332 (431)
T 3t1i_A 300 VKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDI 332 (431)
T ss_dssp SCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred CCCEEEEEEEECCEEEEEEEECCCcceEEEEEE
Confidence 57899999999999999999876 344444444
No 27
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.35 E-value=6.1e-12 Score=115.69 Aligned_cols=88 Identities=7% Similarity=-0.037 Sum_probs=59.1
Q ss_pred CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e----cCCCeEEEecCCCCCCCCC--c
Q 022941 176 GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S----RQDSITYMENPGLIESGNG--R 248 (289)
Q Consensus 176 ~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~----~~~gi~~i~~g~~~~~~~g--~ 248 (289)
..+.|+++|++....+... .. . .-+...++|+++.||.|... . ..+++..+.+|+....... .
T Consensus 210 ~~~nIlvlH~~~~~~~~~~--yi-p-------~~l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E 279 (417)
T 4fbw_A 210 EWFNLLTVHQNHSAHTPTS--YL-P-------ESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGE 279 (417)
T ss_dssp TSEEEEEEESCSSCSSSSS--SC-C-------GGGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHH
T ss_pred CceEEEEecCCccCCCCcc--cC-c-------hhHhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCcccc
Confidence 3478999999876543210 00 1 11445689999999999955 2 2456666766665433211 2
Q ss_pred ccCCcEEEEEEeCcEEEEEEEcCCC
Q 022941 249 EMVDGFLLHKVSSLEILTYFVTLEG 273 (289)
Q Consensus 249 ~~~~gf~~v~v~~~~i~~~~~~~~g 273 (289)
....||.+++++++.+.++.+..+.
T Consensus 280 ~~~kg~~lvei~~~~~~~e~i~l~~ 304 (417)
T 4fbw_A 280 TAPKHCGILNITGKDFHLEKIRLRT 304 (417)
T ss_dssp HSCCEEEEEEEETTEEEEEEEECSS
T ss_pred CCCCEEEEEEEECCEEEEEEEECCC
Confidence 3589999999999999999988654
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.35 E-value=6.8e-12 Score=116.40 Aligned_cols=95 Identities=7% Similarity=-0.006 Sum_probs=61.7
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e----cCCCeEEEecCCCCCCC-C-Ccc
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S----RQDSITYMENPGLIESG-N-GRE 249 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~----~~~gi~~i~~g~~~~~~-~-g~~ 249 (289)
.+.|+++|.+....+... .... -+...++|+++.||.|... . ..+++..+-+|+..... . +..
T Consensus 274 ~~nIlvlH~~~~~~~~~~--yipe--------~ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~ 343 (472)
T 4fbk_A 274 WFNLLTVHQNHSAHTPTS--YLPE--------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGET 343 (472)
T ss_dssp EEEEEEEESCSCCSSTTS--SCCG--------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGC
T ss_pred ceEEEEecCCccCCCccc--cCCh--------hhhhcCCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCC
Confidence 378999999876543210 0001 1334589999999999954 2 23566666666653321 1 223
Q ss_pred cCCcEEEEEEeCcEEEEEEEcCCC-cEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFVTLEG-EVVYRTAT 281 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~~~~g-~~~~~~~i 281 (289)
...||.+++++++.+.++.+..+. ..+...+|
T Consensus 344 ~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i 376 (472)
T 4fbk_A 344 APKHCGILNITGKDFHLEKIRLRTVRPFIMKDI 376 (472)
T ss_dssp SCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred CCCEEEEEEEECCEEEEEEEECCCcccEEEEEE
Confidence 589999999999999999998654 44555554
No 29
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.27 E-value=5.1e-12 Score=113.54 Aligned_cols=71 Identities=15% Similarity=0.249 Sum_probs=45.6
Q ss_pred EEEEEEeCCCCCChh---------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h---hhhhhhccC---CCCCCCeEE
Q 022941 50 FYFISVTGGFRPLEQ---------QTLLLKQMEDVAKSYDARFVINTSELGEDD-P---LKQNATWLF---PSLKVPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~---------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~---~~~~~~~~~---~~l~~P~~~ 113 (289)
+||++++|.|.|... +....+.+.+.+.+.+||+||++||+.... + .+....+.+ ...++|++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 489999998776421 112233344455668999999999985422 2 122222333 344789999
Q ss_pred ecCCCcC
Q 022941 114 TKASKEK 120 (289)
Q Consensus 114 v~GNHD~ 120 (289)
++||||.
T Consensus 81 v~GNHD~ 87 (333)
T 1ii7_A 81 IEGNHDR 87 (333)
T ss_dssp ECCTTTC
T ss_pred eCCcCCC
Confidence 9999994
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=99.00 E-value=2e-08 Score=95.30 Aligned_cols=177 Identities=8% Similarity=0.009 Sum_probs=88.0
Q ss_pred CCccEEEEEEeCCCCCChh-------HHHHHHHHHHH---HhhCCc-cEEEEcCCCCCCChhh-----hhhhccCCCCCC
Q 022941 46 KGLDFYFISVTGGFRPLEQ-------QTLLLKQMEDV---AKSYDA-RFVINTSELGEDDPLK-----QNATWLFPSLKV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~-------~~~~~~~l~~~---~~~~~p-dfvv~~GD~~~~~~~~-----~~~~~~~~~l~~ 109 (289)
....+++++++|.|..... -.+++..+.++ ....+| +++|.+||+....+.. +...+.+..++.
T Consensus 5 ~~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg~ 84 (516)
T 1hp1_A 5 KTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY 84 (516)
T ss_dssp CCEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC
T ss_pred CceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccCC
Confidence 4567999999996543211 12233333332 222245 7999999985433311 111233444554
Q ss_pred CeEEecCCCcCCCCc------------------eeE-----eEeCC------CCCeEEEEEEcCCCccCC-CCCCCCC--
Q 022941 110 PWYTTKASKEKEVGC------------------FQE-----QIRLP------HGEALDIIGVNTGSLQGK-IPTALPS-- 157 (289)
Q Consensus 110 P~~~v~GNHD~~~~~------------------~~~-----~~~~p------~~~~~~~i~lDt~~~~~~-~~~~~~~-- 157 (289)
. ++++||||+..+. ... .+.-| ++-.+-++++.+...... .+....+
T Consensus 85 d-~~~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~ 163 (516)
T 1hp1_A 85 D-AMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIE 163 (516)
T ss_dssp C-EEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEE
T ss_pred C-EEeeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcE
Confidence 3 7889999953321 000 00001 123466777765432110 0110011
Q ss_pred -CcHHHH-HHHHHHHHhhc-CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 158 -ASGDLL-LNWLKSALEAT-NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 158 -~~~~~Q-l~WL~~~L~~~-~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
....+. .+|++ +|++. ..+.+|+++|.|.......+.. ......+...+...+||++|+||.|...
T Consensus 164 ~~d~~~~~~~~v~-~l~~~~~~d~iI~l~H~g~~~~~~~~~~---~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 164 FRKPADEAKLVIQ-ELQQTEKPDIIIAATHMGHYDNGEHGSN---APGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp ECCHHHHHHHHHH-HHHHHTCCSEEEEEEESCCCGGGCCTTS---CCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred EeCHHHHHHHHHH-HHHhcCCCCEEEEEecCCccCCCccccc---CchHHHHHHhCCCCceeEEECCCCCccc
Confidence 122233 34444 46543 5678999999998653322100 0001122223333459999999999843
No 31
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.80 E-value=8.2e-09 Score=87.02 Aligned_cols=183 Identities=9% Similarity=-0.019 Sum_probs=88.1
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
...+++++||.|. . ...+.+.+.++....++|.++++||+...++.-.+..+.+.. .|++.++||||...-+...
T Consensus 11 ~~~~i~visDiHg-~--~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~~~~~~~ 85 (221)
T 1g5b_A 11 KYRNIWVVGDLHG-C--YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQMMIDGLS 85 (221)
T ss_dssp GCSCEEEECCCTT-C--HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHHHHHHHS
T ss_pred CCceEEEEEcCCC-C--HHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHHHHhhhc
Confidence 3468999999773 2 233334444332224689999999987544322233333332 4899999999932111000
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCeEEEEeecccccccc-ccchhhHHh--
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN---GQWCIVVGFHPLVICEE-HEEQLEAKK-- 201 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~---~~~~iV~~HhP~~~~~~-~~~~~~~~~-- 201 (289)
. ...... ...+...+...+ ......+.+++++||++.-.... ....|++.|-.+..... .+.......
T Consensus 86 ~---~~~~~~--~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~l 159 (221)
T 1g5b_A 86 E---RGNVNH--WLLNGGGWFFNL-DYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVI 159 (221)
T ss_dssp T---TCCCHH--HHTTTGGGGGGS-CHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHH
T ss_pred c---CCcHHH--HHHcCCCchhhc-CHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccc
Confidence 0 000000 000000000000 00001244566677753211110 23578889975322110 000000000
Q ss_pred -hHHHHHHHHH-----HhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 202 -IYEPLHHIFM-----KFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 202 -~~~~l~~ll~-----~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
.+..+...++ ..+++.+++||+|... ...+++.+|-+|+.
T Consensus 160 w~~~~~~~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~~in~Gs~ 206 (221)
T 1g5b_A 160 WNRERISNSQNGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAV 206 (221)
T ss_dssp HCCHHHHHHHTTCCCCCBTSSEEEECSSCCSSCEEETTEEECCCCHH
T ss_pred cCchhhhhhccccCCcccCCCEEEECCCCCccceeeCCEEEEECCCC
Confidence 1234444444 3578999999999965 55567777766654
No 32
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.77 E-value=4.9e-08 Score=93.41 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=87.0
Q ss_pred CCccEEEEEEeCCCCCC--h------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-----hhhhccCC
Q 022941 46 KGLDFYFISVTGGFRPL--E------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-----QNATWLFP 105 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~--~------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-----~~~~~~~~ 105 (289)
....+++++++|.|... . .-.+++..+.++.+ ..|| +++.+||+....+.. +...+.+.
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~-~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWA-RAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHH-HSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHh-hCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 35679999999955321 1 11345555554433 3566 899999986543321 11123345
Q ss_pred CCCCCeEEecCCCcCCCCc--e------------eEeEe----------C-C------CCCeEEEEEEcCCCccC-CCCC
Q 022941 106 SLKVPWYTTKASKEKEVGC--F------------QEQIR----------L-P------HGEALDIIGVNTGSLQG-KIPT 153 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~~--~------------~~~~~----------~-p------~~~~~~~i~lDt~~~~~-~~~~ 153 (289)
.++.. +.++||||+..+. + .+.+. . | ++..+-++++.+..... ..+.
T Consensus 105 ~lg~d-~~~lGNHEfd~g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~ 183 (552)
T 2z1a_A 105 RLRYR-AMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG 183 (552)
T ss_dssp HTTCC-EEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCC
T ss_pred hcCCC-ccccccccccCCHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccCCC
Confidence 55444 7889999954331 0 00000 0 1 12345666666542211 0010
Q ss_pred CCCC-CcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce
Q 022941 154 ALPS-ASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY 227 (289)
Q Consensus 154 ~~~~-~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~ 227 (289)
.... ....++++..-++|++...+.+|++.|.|.... . .+.++ .+||++|+||.|...
T Consensus 184 ~~~~~~d~~~~~~~~v~~l~~~~~d~iIvL~H~g~~~d---------~-------~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 184 PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGED---------L-------KLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH---------H-------HHHTTCSSCCEEEECSSCCCB
T ss_pred CCcEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcchH---------H-------HHHHhCCCccEEEeCCcCccc
Confidence 0000 122345554555676555678999999986220 0 12333 489999999999843
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.66 E-value=3.8e-07 Score=86.77 Aligned_cols=208 Identities=13% Similarity=0.094 Sum_probs=100.0
Q ss_pred CCCccEEEEEEeCCCCCCh-------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh----------hhh
Q 022941 45 RKGLDFYFISVTGGFRPLE-------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK----------QNA 100 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~-------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~----------~~~ 100 (289)
..+.++++++++|.|.... .-.+++..+.++.+ ..|+ ++|.+||+....+.. +..
T Consensus 15 ~~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~-~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 15 FQGSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR-QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp ---CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHT-TSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred cCCCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHh-cCCCEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 3467899999999553211 01244555555433 3555 788899986544321 122
Q ss_pred hccCCCCCCCeEEecCCCcCCCCc------------------eeE---eEe-CC------CCCeEEEEEEcCCCccCCC-
Q 022941 101 TWLFPSLKVPWYTTKASKEKEVGC------------------FQE---QIR-LP------HGEALDIIGVNTGSLQGKI- 151 (289)
Q Consensus 101 ~~~~~~l~~P~~~v~GNHD~~~~~------------------~~~---~~~-~p------~~~~~~~i~lDt~~~~~~~- 151 (289)
.+.+..++.. +.++||||+..|. ... .+. -| ++-.+-++++.+.......
T Consensus 94 ~~~ln~lg~D-~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~ 172 (527)
T 3qfk_A 94 VDFYNRMAFD-FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQ 172 (527)
T ss_dssp HHHHHHTCCC-EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSC
T ss_pred HHHHHhcCCc-EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccC
Confidence 2345555554 5679999954331 000 000 11 1234566777654321100
Q ss_pred C---CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH--hCCeEEEeCCCccc
Q 022941 152 P---TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK--FGVNTYLSKHGCIK 226 (289)
Q Consensus 152 ~---~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~--~~V~~vl~GH~H~~ 226 (289)
+ .+-.-....+.++-.-++|+ ...+.+|++.|.+.......+.........+....+.++ -+||++|+||.|..
T Consensus 173 ~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~ 251 (527)
T 3qfk_A 173 PEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQ 251 (527)
T ss_dssp HHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCE
T ss_pred ccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcc
Confidence 0 00000112222322223455 345788999997764321110000000000001123333 48999999999995
Q ss_pred e-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCc
Q 022941 227 Y-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSL 262 (289)
Q Consensus 227 ~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~ 262 (289)
. ...+++..+.+|+-+. .-|-..++++++
T Consensus 252 ~~~~v~~~~ivqag~~g~-------~lg~i~l~~~~~ 281 (527)
T 3qfk_A 252 IAERFKQTAVIQPGTRGT-------TVGRVVLSTDEY 281 (527)
T ss_dssp EEEEETTEEEEEECSTTS-------EEEEEEEEECSS
T ss_pred cceEECCEEEeccChhhC-------EEEEEEEEEECC
Confidence 5 4456777666655432 344455555544
No 34
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.59 E-value=1e-06 Score=84.27 Aligned_cols=160 Identities=13% Similarity=0.031 Sum_probs=83.0
Q ss_pred Ccc-EEEEcCCCCCCChh--h---hhhhccCCCCCCCeEEecCCCcCCCCc--e---eE--eE-------e---------
Q 022941 80 DAR-FVINTSELGEDDPL--K---QNATWLFPSLKVPWYTTKASKEKEVGC--F---QE--QI-------R--------- 130 (289)
Q Consensus 80 ~pd-fvv~~GD~~~~~~~--~---~~~~~~~~~l~~P~~~v~GNHD~~~~~--~---~~--~~-------~--------- 130 (289)
+|| ++|.+||+....+. + +...+.++.++.+++ + ||||+..+. + .+ .| .
T Consensus 122 gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~ 199 (562)
T 2wdc_A 122 GGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLF 199 (562)
T ss_dssp TCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSS
T ss_pred CCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCccc
Confidence 388 89999998654331 1 122244566677765 6 999953331 0 00 00 0
Q ss_pred CC------CCCeEEEEEEcCCCccCCCC----CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHH
Q 022941 131 LP------HGEALDIIGVNTGSLQGKIP----TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 131 ~p------~~~~~~~i~lDt~~~~~~~~----~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
-| ++..+-++++.+.......+ .+..-....+.++-.-++|++...+.+|++.|.|... + .
T Consensus 200 ~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~~--------d-~ 270 (562)
T 2wdc_A 200 PAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQL--------D-A 270 (562)
T ss_dssp CSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHHH--------H-H
T ss_pred CCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCcc--------h-H
Confidence 01 12346667775532110000 0000011223333333456654567899999998521 0 1
Q ss_pred hhHHHHHHHHHH-hCCeEEEeCCCccce---ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEE
Q 022941 201 KIYEPLHHIFMK-FGVNTYLSKHGCIKY---SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEI 264 (289)
Q Consensus 201 ~~~~~l~~ll~~-~~V~~vl~GH~H~~~---~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i 264 (289)
.+.++ .+||++|+||.|... ...+++..+.+|+-+ ..-|...++++++++
T Consensus 271 -------~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~~g-------~~lg~i~l~~~~g~v 324 (562)
T 2wdc_A 271 -------ALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAG-------KALMRVDLKLWKGGI 324 (562)
T ss_dssp -------HHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCSTT-------CEEEEEEEEEETTEE
T ss_pred -------HHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCccc-------cEEEEEEEEEeCCcE
Confidence 23333 389999999999843 223566555544432 245666666665543
No 35
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.44 E-value=7.6e-07 Score=84.99 Aligned_cols=77 Identities=6% Similarity=0.126 Sum_probs=45.0
Q ss_pred CCCCccEEEEEEeCCCCCCh-----------------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhh
Q 022941 44 NRKGLDFYFISVTGGFRPLE-----------------QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNAT 101 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~-----------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~ 101 (289)
.+...++++++++|.|.... .-.+++..+.++.++.+.+++|.+||+....+.. +...
T Consensus 20 ~~~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 20 SPDPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp ---CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred CCCceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHH
Confidence 34567899999999553211 1245555565554444447999999986544321 1112
Q ss_pred ccCCCCCCCeEEecCCCcCC
Q 022941 102 WLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 102 ~~~~~l~~P~~~v~GNHD~~ 121 (289)
+.+..++.. +.++||||+.
T Consensus 100 ~~ln~lg~d-~~~~GNHEfd 118 (546)
T 4h2g_A 100 HFMNALRYD-AMALGNHEFD 118 (546)
T ss_dssp HHHHHHTCS-EEECCGGGGT
T ss_pred HHHHhcCCc-EEeccCcccc
Confidence 344555555 5789999953
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.36 E-value=1.2e-05 Score=76.01 Aligned_cols=75 Identities=8% Similarity=-0.005 Sum_probs=41.3
Q ss_pred CccEEEEEEeCCCCCCh---------------hHHHHHHHHHHHHhhCCccEEEE-cCCCCCCChh-----hhhhhccCC
Q 022941 47 GLDFYFISVTGGFRPLE---------------QQTLLLKQMEDVAKSYDARFVIN-TSELGEDDPL-----KQNATWLFP 105 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~---------------~~~~~~~~l~~~~~~~~pdfvv~-~GD~~~~~~~-----~~~~~~~~~ 105 (289)
..++++++++|.|.... .-.+++..+.++. +..|+.+++ +||+...... .+...+.+.
T Consensus 4 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r-~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 4 AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEK-AKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMN 82 (509)
T ss_dssp CEEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHH-HHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHT
T ss_pred ceEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHH-hcCCCeEEEECCCCCCCchhhhhcCChHHHHHHH
Confidence 35799999999552111 0233444444433 346776555 9997543221 111223455
Q ss_pred CCCCCeEEecCCCcCCCC
Q 022941 106 SLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~ 123 (289)
.++.. ++++||||+..|
T Consensus 83 ~lg~D-~~tlGNHEfd~G 99 (509)
T 3ive_A 83 TMPFD-AVTIGNHEFDHG 99 (509)
T ss_dssp TSCCS-EECCCGGGGTTC
T ss_pred hcCCc-EEeecccccccC
Confidence 55544 677899995433
No 37
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.19 E-value=7.7e-06 Score=78.55 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=43.8
Q ss_pred CCCccEEEEEEeCCCCCChh------------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQ------------------QTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNAT 101 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~------------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~ 101 (289)
+.+-++++++++|.|..... -.+++..+.++.++....++|..||+......+ +...
T Consensus 8 ~~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~ 87 (579)
T 3ztv_A 8 HKAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADA 87 (579)
T ss_dssp CCCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHH
T ss_pred CCceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHH
Confidence 34567999999995532111 234555555544443344999999986543211 1112
Q ss_pred ccCCCCCCCeEEecCCCcCC
Q 022941 102 WLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 102 ~~~~~l~~P~~~v~GNHD~~ 121 (289)
+.+..++.. ++++||||+.
T Consensus 88 ~~ln~lg~D-~~tlGNHEfd 106 (579)
T 3ztv_A 88 AVMNAGNFH-YFTLGNHEFD 106 (579)
T ss_dssp HHHHHHTCS-EEECCSGGGT
T ss_pred HHHHhcCcC-eeeccccccc
Confidence 334444444 5789999953
No 38
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.14 E-value=0.0002 Score=68.25 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=45.9
Q ss_pred CCCccEEEEEEeCCCCCCh-------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-------hhhhcc
Q 022941 45 RKGLDFYFISVTGGFRPLE-------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-------QNATWL 103 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~-------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-------~~~~~~ 103 (289)
.....+++++++|.|.... .-.+++..+.+..++.+|+ ++|.+||.....+.. +...+.
T Consensus 11 ~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ 90 (557)
T 3c9f_A 11 LTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPI 90 (557)
T ss_dssp CCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred CCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHH
Confidence 3467899999999443210 1234444555444346788 579999975433311 112244
Q ss_pred CCCCCCCeEEecCCCcCCCC
Q 022941 104 FPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 104 ~~~l~~P~~~v~GNHD~~~~ 123 (289)
+..++.. +.++||||+..|
T Consensus 91 ln~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 91 FIKQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp HTTSCCS-EECCCGGGSSSH
T ss_pred HHhcCCC-EEeecchhcccc
Confidence 5666655 568899995443
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.01 E-value=5.7e-05 Score=65.63 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=42.5
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-hhhhhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-PLKQNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~~~~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.++++++||.+ |...-..++..+.++.++.++|+++..||....+ .......+.+..+++- ..++|||++..+
T Consensus 4 ~m~ilf~GDv~-G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-a~TlGNHefD~g 77 (281)
T 1t71_A 4 SIKFIFLGDVY-GKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHTWFQK 77 (281)
T ss_dssp CCEEEEECEEB-HHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTCCG
T ss_pred eEEEEEECCcC-ChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCC-EEEEccCcccCC
Confidence 57999999943 2223344555555554444689999999964322 1112223334344433 467799996555
No 40
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.97 E-value=0.00027 Score=63.27 Aligned_cols=54 Identities=13% Similarity=0.185 Sum_probs=31.1
Q ss_pred HHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 168 KSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 168 ~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
-++|++...+.+|+++|-......... .... ....+.++. +||++|.||.|...
T Consensus 200 v~~Lk~~g~D~II~l~H~G~~~d~~~~---~~e~---~~~~lA~~v~giD~IigGHsH~~~ 254 (341)
T 3gve_A 200 IPKMKAEGADVIIALAHTGIEKQAQSS---GAEN---AVFDLATKTKGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHHHTTCSEEEEEECCCCCSSCCCT---TCSS---CHHHHHHHCSCCCEEEECSSCCEE
T ss_pred HHHHHhcCCCEEEEEeccCcccccccc---ccch---hHHHHHhcCCCCcEEEECCCCccC
Confidence 345665456789999998764322110 0000 011233333 89999999999853
No 41
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.74 E-value=0.00035 Score=59.86 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=38.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-hhhhhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-PLKQNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~~~~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.|++++||.- |......+...+.++.++. |+++..|+....+ ......++.+..+++- ..+.|||++..+
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~--d~vi~nge~~~~G~g~~~~~~~~l~~~G~D-a~TlGNHefD~~ 71 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAG-CLTLGNHAWHHK 71 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCS-EEECCTTTTSST
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC--CEEEECCCCccCCcCCCHHHHHHHHhCCCC-EEEeccccccCc
Confidence 3789999932 3333345555555554443 9999888854322 1112223334344444 356699995443
No 42
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.72 E-value=0.00042 Score=59.15 Aligned_cols=70 Identities=10% Similarity=0.048 Sum_probs=38.9
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-hhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-QNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.|++++||. .|......+...+.++.++. |+++..|.....+.-+ +..++.+..+++-. .+.|||++..+
T Consensus 1 m~ilfiGDi-~g~~G~~~v~~~l~~lr~~~--d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~-~T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDV-MAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTCCE-EECCTTTTSCT
T ss_pred CEEEEEEec-CCcccHHHHHHHHHHHHhhC--CEEEEeCCCccCCCCcCHHHHHHHHhCCCCE-EEeccEeeECc
Confidence 378999992 22233445666666654444 8888777753222211 22233344445554 47799995444
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.67 E-value=0.00035 Score=62.52 Aligned_cols=76 Identities=9% Similarity=0.094 Sum_probs=42.2
Q ss_pred CCccEEEEEEeCCCCCChh-------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCChh--hh-----------h
Q 022941 46 KGLDFYFISVTGGFRPLEQ-------------QTLLLKQMEDVAKSYDARFVINTSELGEDDPL--KQ-----------N 99 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~-------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~--~~-----------~ 99 (289)
..-.++++..+|.|....+ -.+++..+.++-++.+..++|..||.....+. |. .
T Consensus 5 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p 84 (339)
T 3jyf_A 5 ATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHP 84 (339)
T ss_dssp CEEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCH
T ss_pred cceeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchH
Confidence 3467999999995432110 13445555544333333488999998654332 11 1
Q ss_pred hhccCCCCCCCeEEecCCCcCCC
Q 022941 100 ATWLFPSLKVPWYTTKASKEKEV 122 (289)
Q Consensus 100 ~~~~~~~l~~P~~~v~GNHD~~~ 122 (289)
..+.+..++.- +.++||||+..
T Consensus 85 ~~~~mn~lg~D-~~t~GNHEfd~ 106 (339)
T 3jyf_A 85 VYKAMNTLNYA-VGNLGNHEFNY 106 (339)
T ss_dssp HHHHHTTSCCS-EEECCGGGGTT
T ss_pred HHHHHHhcCCC-EEecchhhhhc
Confidence 12334555544 46789999543
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.62 E-value=0.00041 Score=65.79 Aligned_cols=50 Identities=22% Similarity=0.165 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccc
Q 022941 161 DLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIK 226 (289)
Q Consensus 161 ~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~ 226 (289)
.+..+..-++|++...+-+|++.|--.. .+ . .+.++. +||+++.||.|..
T Consensus 172 v~~~~~~v~~Lr~~g~D~II~LsH~G~~--------~d-~-------~la~~v~giD~IlgGHsH~~ 222 (530)
T 4h1s_A 172 ITALQPEVDKLKTLNVNKIIALGHSGFE--------MD-K-------LIAQKVRGVDVVVGGHSNTF 222 (530)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESCHH--------HH-H-------HHHHHSTTCCEEECCSSCCC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeccCCch--------HH-H-------HHHhcCCCCCeeccCCccce
Confidence 3344444556776566789999996431 01 1 233444 7999999999984
No 45
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.54 E-value=2.8e-05 Score=67.82 Aligned_cols=66 Identities=11% Similarity=-0.038 Sum_probs=40.6
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
+++++||.|. . ...+.+.+.++....++|.++++||+...++.-.+..+.+..++.+++.++||||
T Consensus 2 ~i~vigDiHG-~--~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe 67 (280)
T 2dfj_A 2 ATYLIGDVHG-C--YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHD 67 (280)
T ss_dssp CEEEECCCCS-C--HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHH
T ss_pred eEEEEecCCC-C--HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCc
Confidence 5789999774 2 2233333333222246899999999865544222333333334448999999999
No 46
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.36 E-value=6.9e-05 Score=64.61 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=39.5
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCc-cEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDA-RFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~p-dfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
.-+++++||.| |.. ..+.+.+.. ....++ |.+|++||+...++.-.+..+.+. ..+++.++||||.
T Consensus 18 ~~~i~visDiH-g~~--~~l~~~l~~-~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~--~~~~~~v~GNHd~ 84 (262)
T 2qjc_A 18 TGRVIIVGDIH-GCR--AQLEDLLRA-VSFKQGSDTLVAVGDLVNKGPDSFGVVRLLK--RLGAYSVLGNHDA 84 (262)
T ss_dssp CSCEEEECCCT-TCH--HHHHHHHHH-HTCCTTTSEEEECSCCSSSSSCHHHHHHHHH--HHTCEECCCHHHH
T ss_pred CCeEEEEeCCC-CCH--HHHHHHHHH-HhccCCCCEEEEecCCCCCCCCHHHHHHHHH--HCCCEEEeCcChH
Confidence 34899999977 332 233333333 333344 999999998654432122222222 2378999999993
No 47
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.41 E-value=0.0012 Score=59.12 Aligned_cols=70 Identities=7% Similarity=0.004 Sum_probs=40.5
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-------CCccEEEEcCCCCCCChhhhhhhccCC-------CCCCCeE
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-------YDARFVINTSELGEDDPLKQNATWLFP-------SLKVPWY 112 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-------~~pdfvv~~GD~~~~~~~~~~~~~~~~-------~l~~P~~ 112 (289)
+...+++++||.|. .. .++.+.+...... .++|.+|++||+...++.-.+..+.+. ..+.+++
T Consensus 68 ~~~~~i~vigDiHG-~~--~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHG-QY--DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTT-CH--HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCC-CH--HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEE
Confidence 45678999999773 22 2333333321100 147999999998654432122222211 2245789
Q ss_pred EecCCCc
Q 022941 113 TTKASKE 119 (289)
Q Consensus 113 ~v~GNHD 119 (289)
.+.||||
T Consensus 145 ~v~GNHE 151 (342)
T 2z72_A 145 LLMGNHE 151 (342)
T ss_dssp ECCCHHH
T ss_pred EEecCCc
Confidence 9999999
No 48
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.35 E-value=0.003 Score=55.65 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=39.9
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+..-+++++||.|. .-.++.+.+.........+.++++||....++.-.+..+.+.. .+-.++.+.||||
T Consensus 57 p~~~ri~viGDIHG---~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE 130 (315)
T 3h63_A 57 KETEKITVCGDTHG---QFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHE 130 (315)
T ss_dssp CTTCEEEEECCCTT---CHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CCCceEEEEecCCC---CHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcc
Confidence 44578999999764 2233444443322112335699999987655422222222111 1345899999999
No 49
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.33 E-value=0.0025 Score=59.37 Aligned_cols=70 Identities=7% Similarity=-0.074 Sum_probs=40.2
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+...+++++||.|. . -.++.+.+.........+-+|++||....++.-.+....+.. .+.+++.++||||
T Consensus 210 ~~~~~~~vigDiHG-~--~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE 283 (477)
T 1wao_1 210 KETEKITVCGDTHG-Q--FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHE 283 (477)
T ss_dssp CSSCEEEEECBCTT-C--HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CCCcceEEEeCCCC-C--HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCcc
Confidence 34578999999764 1 233333333322112235699999987655422222222111 2457899999999
No 50
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=96.27 E-value=0.0024 Score=56.27 Aligned_cols=67 Identities=4% Similarity=-0.095 Sum_probs=39.0
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCcC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKEK 120 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD~ 120 (289)
-+++++||.|. . -.++.+.+.. ....+++.++++||....++.-.+..+.+.. .+-.++.+.||||.
T Consensus 50 ~~i~viGDIHG-~--~~~L~~ll~~-~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~ 120 (309)
T 2ie4_C 50 CPVTVCGDVHG-Q--FHDLMELFRI-GGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120 (309)
T ss_dssp SSEEEECCCTT-C--HHHHHHHHHH-HCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred CCEEEEecCCC-C--HHHHHHHHHH-cCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCH
Confidence 35899999763 2 2233333332 3334567789999987655422222222211 13358999999994
No 51
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.0048 Score=54.84 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=39.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
..-+++++||.|. .-.++.+.+........-+.+|++||....++.-.+....+. ..+-.++.+.||||
T Consensus 62 ~~~ri~viGDIHG---~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE 134 (335)
T 3icf_A 62 PDVKISVCGDTHG---QFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHE 134 (335)
T ss_dssp TTCEEEEECCCTT---CHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cCceEEEEecCCC---CHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchh
Confidence 6678999999764 223344444332111122469999998765542222222211 11345899999999
No 52
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=95.88 E-value=0.0045 Score=54.95 Aligned_cols=66 Identities=8% Similarity=-0.053 Sum_probs=38.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD~ 120 (289)
++.++||.|. . -.++.+.+.. ......+-+|++||+...++.-.+..+.+.. .+-.++.+.||||.
T Consensus 58 ~i~viGDIHG-~--~~~L~~ll~~-~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~ 127 (330)
T 1fjm_A 58 PLKICGDIHG-Q--YYDLLRLFEY-GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (330)
T ss_dssp SEEEECBCTT-C--HHHHHHHHHH-HCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSS
T ss_pred ceEEecCCCC-C--HHHHHHHHHH-hCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchH
Confidence 4889999764 2 2333333433 2223457799999987655422222222211 13458999999993
No 53
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=95.16 E-value=0.012 Score=51.48 Aligned_cols=65 Identities=9% Similarity=-0.023 Sum_probs=37.7
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
+++++||.|. .-.++.+.+.. ....+.+-+|++||....++.-.+..+.+. ..+-.++.+.||||
T Consensus 57 ~i~viGDIHG---~~~~L~~ll~~-~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE 125 (299)
T 3e7a_A 57 PLKICGDIHG---QYYDLLRLFEY-GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (299)
T ss_dssp SEEEECBCTT---CHHHHHHHHHH-HCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CEEEEecCCC---CHHHHHHHHHH-hCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCch
Confidence 4889999764 22334343433 233455779999998665442222222111 12345899999999
No 54
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=94.85 E-value=0.013 Score=54.79 Aligned_cols=65 Identities=9% Similarity=-0.032 Sum_probs=37.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+++++||.|. . -.++.+.+. .......+-+|++||....++.-.+....+.. .+-.++.+.||||
T Consensus 84 pI~VIGDIHG-q--~~dL~~LL~-~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE 152 (521)
T 1aui_A 84 PVTVCGDIHG-Q--FFDLMKLFE-VGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHE 152 (521)
T ss_dssp SEEEECCCTT-C--HHHHHHHHH-HHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceeeccCCCC-C--HHHHHHHHH-hcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCcc
Confidence 4889999764 1 233333333 33234468899999987655422222222111 1335899999999
No 55
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=94.79 E-value=0.018 Score=51.41 Aligned_cols=65 Identities=9% Similarity=-0.041 Sum_probs=38.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
+++++||.|.- -.++.+.+. .......+-++++||....++.-.+....+. ..+-.++.+.||||
T Consensus 71 pi~ViGDIHG~---~~dL~~ll~-~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE 139 (357)
T 3ll8_A 71 PVTVCGDIHGQ---FFDLMKLFE-VGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHE 139 (357)
T ss_dssp SEEEECCCTTC---HHHHHHHHH-HHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cceeeccCCCC---HHHHHHHHH-hcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchh
Confidence 48899996641 233333333 2333456889999998765542222222111 11335899999999
No 56
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=87.27 E-value=1.1 Score=41.46 Aligned_cols=73 Identities=18% Similarity=0.075 Sum_probs=41.6
Q ss_pred CccEEEEEEeCCCCCChh-H-HHHHHHHHHHHh-----------hCCccEEEEcCCCCCC-C--h------hh--h----
Q 022941 47 GLDFYFISVTGGFRPLEQ-Q-TLLLKQMEDVAK-----------SYDARFVINTSELGED-D--P------LK--Q---- 98 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~-~-~~~~~~l~~~~~-----------~~~pdfvv~~GD~~~~-~--~------~~--~---- 98 (289)
..+..+++++|-+.|... . ..-.+.+.++.. ..+..-+|+.||.... + . .+ +
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 466789999996666532 1 222333333332 2468899999996211 0 0 00 0
Q ss_pred ---hhhc----cCCCC--CCCeEEecCCCc
Q 022941 99 ---NATW----LFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 99 ---~~~~----~~~~l--~~P~~~v~GNHD 119 (289)
+.++ .+.++ .+|+..+|||||
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~D 307 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFD 307 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTS
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCC
Confidence 0111 12333 789999999999
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=79.16 E-value=2.8 Score=38.58 Aligned_cols=73 Identities=10% Similarity=0.135 Sum_probs=43.5
Q ss_pred CccEEEEEEeCCCCCC--hhHHHHHHHHHHHHhhCCccEEEEcCCCCC-C------------------Chhhhhhhc---
Q 022941 47 GLDFYFISVTGGFRPL--EQQTLLLKQMEDVAKSYDARFVINTSELGE-D------------------DPLKQNATW--- 102 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~--~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~-~------------------~~~~~~~~~--- 102 (289)
..++++++.++-.... .....+.+.+..++++.+||.+|++|...+ . ...+++.|+
T Consensus 145 ~~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i 224 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLF 224 (460)
T ss_dssp SSCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHT
T ss_pred CCCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHH
Confidence 4789999999833322 223444444544444358999999998421 0 112333332
Q ss_pred --cCCCC--CCCeEEecCCCc
Q 022941 103 --LFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 103 --~~~~l--~~P~~~v~GNHD 119 (289)
+++.+ .+.++.|||+||
T Consensus 225 ~~il~~l~~~t~VVlVPS~rD 245 (460)
T 3flo_A 225 TPILKTISPHIQTVLIPSTKD 245 (460)
T ss_dssp HHHHTTSCTTSEEEEECCTTB
T ss_pred HHHHHhccCCCEEEEeCCccc
Confidence 22333 467899999999
No 58
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=50.50 E-value=11 Score=31.22 Aligned_cols=65 Identities=6% Similarity=-0.070 Sum_probs=40.4
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
.++.+..+|--.... ....+. + .+...|++++.|..+.....-.+..+.+++.++|++.-|||.|
T Consensus 11 ~w~h~~~~DPdk~~~--~~~l~~---~-~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~p~~~~ 75 (235)
T 3w01_A 11 KWRHIFKLDPAKHIS--DDDLDA---I-CMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIE 75 (235)
T ss_dssp TCCEEEEECTTSCCC--HHHHHH---H-HTSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEECCCST
T ss_pred cceEEEeECCCCcCC--HHHHHH---H-HHcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEecCCHH
Confidence 578888999432111 112222 2 3568999999998755332222233344447899999999998
No 59
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=49.09 E-value=75 Score=26.42 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=45.4
Q ss_pred CCCCccEEEEEEeCCCCCChh-HHHHHHHHHHHHhhCCccEEEEcCCCCC-CChhhhhhhccCCCCCCCeEEec
Q 022941 44 NRKGLDFYFISVTGGFRPLEQ-QTLLLKQMEDVAKSYDARFVINTSELGE-DDPLKQNATWLFPSLKVPWYTTK 115 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~~-~~~~~~~l~~~~~~~~pdfvv~~GD~~~-~~~~~~~~~~~~~~l~~P~~~v~ 115 (289)
.+....+.+-++|-|..-... -..+.+.+.++++..+|||+|+.+=+.. .++ ....+.+..-++|.+.+-
T Consensus 27 rAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP--~~ARE~l~~~~iP~IvI~ 98 (283)
T 1qv9_A 27 RADREDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGP--SKAREMLADSEYPAVIIG 98 (283)
T ss_dssp TSCCSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHH--HHHHHHHHTSSSCEEEEE
T ss_pred hhccCCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCc--hHHHHHHHhCCCCEEEEc
Confidence 345668888888886543333 3455566666777889999999998743 233 223345555678877653
No 60
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=41.34 E-value=63 Score=28.08 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCeEEEeCCCccce--ec-CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCc
Q 022941 204 EPLHHIFMKFGVNTYLSKHGCIKY--SR-QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGE 274 (289)
Q Consensus 204 ~~l~~ll~~~~V~~vl~GH~H~~~--~~-~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~ 274 (289)
+.+..+++.++.++++.||+|... .. .+.+.-|-+|+. .....+.+.++++++ ..++.+|+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~~~~~~~~~~i~Idsg~~--------~gg~la~l~i~~~~~--~~v~~~g~ 331 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIK--------VGKSGELLLLENNRL--IRGLYDGT 331 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSSCEEETTTTEEECCCCGG--------GSSCCCEEEEETTEE--EEECTTSC
T ss_pred HHHHHHHHHCCCcEEEECCCcccchhhhcCCCEEEEECCCC--------CCCcEEEEEEECCEE--EEEecCCc
Confidence 455677888899999999999843 22 223322322222 112235677777753 33345664
No 61
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=40.88 E-value=72 Score=28.88 Aligned_cols=24 Identities=4% Similarity=0.044 Sum_probs=20.6
Q ss_pred HHHHHHHHHhCCeEEEeCCCccce
Q 022941 204 EPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 204 ~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
+.+...++++++++++.||.+...
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~ 410 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAE 410 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcC
Confidence 567788899999999999999854
No 62
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=37.28 E-value=16 Score=30.20 Aligned_cols=66 Identities=14% Similarity=0.034 Sum_probs=40.4
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
..++.+..+|.-..... +.+.++ .....|++++.|-.+.....-.+..+..++.++|++.-|||++
T Consensus 5 ~~w~h~~~iDPdk~~~~-----~~~~~~-~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~ 70 (228)
T 3vzx_A 5 TEWKHVFKLDPNKDLPD-----EQLEIL-CESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIE 70 (228)
T ss_dssp GGCCEEEEECTTSCCCT-----THHHHH-HTSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCGG
T ss_pred cceeEEEeECCCCCCCH-----HHHHHH-HHcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCHH
Confidence 35788889994321111 112222 3568999999996644332222223334447899999999998
No 63
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=36.98 E-value=13 Score=20.94 Aligned_cols=17 Identities=6% Similarity=0.163 Sum_probs=11.9
Q ss_pred CCCCCchhHHHHHHHHH
Q 022941 1 MAKRPSWVCTLITQLSL 17 (289)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (289)
|+||.+++.+.+.....
T Consensus 3 lsRR~FLK~~aaa~Aaa 19 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAAA 19 (35)
T ss_dssp CCSHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 57999999766544443
No 64
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=36.70 E-value=40 Score=28.05 Aligned_cols=42 Identities=10% Similarity=-0.069 Sum_probs=26.9
Q ss_pred CCeEEEeCCCccce-ecCC--CeEEEecCCCCCCCCCcccCCcEEEEEEeCcE
Q 022941 214 GVNTYLSKHGCIKY-SRQD--SITYMENPGLIESGNGREMVDGFLLHKVSSLE 263 (289)
Q Consensus 214 ~V~~vl~GH~H~~~-~~~~--gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~ 263 (289)
+.+.+++||+|... ...+ ++..|-+|+.. ...++.+.+++.+
T Consensus 196 g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~~~--------gG~Lt~l~l~~~~ 240 (262)
T 2qjc_A 196 GPETVVFGHDARRGLQEQYKPLAIGLDSRCVY--------GGRLSAAVFPGGC 240 (262)
T ss_dssp CSSEEEECCCGGGCCBCTTTTTEEECCCBGGG--------TSEEEEEEETTTE
T ss_pred CCCEEEECCCccccccccCCCCEEEeeCcccc--------CCeeEEEEEcCCc
Confidence 57899999999854 4444 66666655541 1345666676554
No 65
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=31.21 E-value=64 Score=17.23 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhccCCC
Q 022941 14 QLSLCLALYVALNLGQP 30 (289)
Q Consensus 14 ~~~~~~~~~~~~~~~~~ 30 (289)
+.|+|.+++..+++.+.
T Consensus 10 lai~c~LLfs~Ls~vkA 26 (30)
T 1z65_A 10 VAILCMLLASHLSTVKA 26 (30)
T ss_dssp HHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHhhHHHHHh
Confidence 56777788877775543
No 66
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.73 E-value=73 Score=24.61 Aligned_cols=26 Identities=23% Similarity=0.331 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhhCCccEEEEcCCCC
Q 022941 66 TLLLKQMEDVAKSYDARFVINTSELG 91 (289)
Q Consensus 66 ~~~~~~l~~~~~~~~pdfvv~~GD~~ 91 (289)
..+.+++.......+.|+|+.+|=++
T Consensus 67 ~~i~~al~~~~a~~~~DlVittGG~g 92 (178)
T 3iwt_A 67 IKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCCcc
Confidence 34444444444445688888888765
No 67
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=28.40 E-value=78 Score=24.33 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhhCCccEEEEcCCCCC
Q 022941 65 QTLLLKQMEDVAKSYDARFVINTSELGE 92 (289)
Q Consensus 65 ~~~~~~~l~~~~~~~~pdfvv~~GD~~~ 92 (289)
...+.+++.+..+..+.|+||.+|=.+.
T Consensus 57 ~~~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 57 KESIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp HHHHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 3445555554443236889999988653
No 68
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=28.11 E-value=97 Score=23.85 Aligned_cols=67 Identities=6% Similarity=0.027 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHhhcC------CC-eEEEEeeccccccccccchhhHHhhHHHHHHHHHHhC-CeEEEeCCCcc
Q 022941 158 ASGDLLLNWLKSALEATN------GQ-WCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFG-VNTYLSKHGCI 225 (289)
Q Consensus 158 ~~~~~Ql~WL~~~L~~~~------~~-~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~-V~~vl~GH~H~ 225 (289)
...+.|.+ |+++|+... .+ .+|.+.-.-.|..+...-........+.+..+|+++. ..+.+.||+-.
T Consensus 22 ~~~d~q~~-l~~~l~~~~v~v~~~~~~~~i~~~~~i~F~~~sa~L~~~~~~~L~~la~~l~~~~~~~i~I~GhTD~ 96 (169)
T 3ldt_A 22 IYRDSKRK-IIRDLQKQDIQYVEYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDN 96 (169)
T ss_dssp HHHHHHHH-HHHHHHHTTCEEEEETTEEEEEEETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTT
T ss_pred HHHHHHHH-HHHHHhhCCcEEEEeCCEEEEEecCcceeCCCCceeCHHHHHHHHHHHHHHHhCCCCeEEEEeEeCC
Confidence 34466777 999998543 12 2333322223444432111112233566777788874 58999999854
No 69
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=28.04 E-value=85 Score=24.77 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=26.1
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE 92 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~ 92 (289)
.....+++| +...+.+++.+..+..+.|+||.+|=.+.
T Consensus 53 v~~~~iv~D------d~~~I~~al~~a~~~~~~DlVIttGGtg~ 90 (189)
T 1jlj_A 53 ISAYKIVPD------EIEEIKETLIDWCDEKELNLILTTGGTGF 90 (189)
T ss_dssp EEEEEEECS------CHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EEEEEEeCC------CHHHHHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 345567777 45666677766554447899999998753
No 70
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=27.75 E-value=83 Score=24.32 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhhCCccEEEEcCCCC
Q 022941 66 TLLLKQMEDVAKSYDARFVINTSELG 91 (289)
Q Consensus 66 ~~~~~~l~~~~~~~~pdfvv~~GD~~ 91 (289)
..+.+++.+..+..+.|+||.+|=++
T Consensus 55 ~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 55 YAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred HHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 34444454443322467777777664
No 71
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=27.16 E-value=93 Score=24.72 Aligned_cols=36 Identities=11% Similarity=0.259 Sum_probs=26.7
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELG 91 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~ 91 (289)
....+++| +...+.+++.+.....+.|+||.+|=.+
T Consensus 42 ~~~~iV~D------d~~~I~~al~~a~~~~~~DlVitTGGtg 77 (195)
T 1di6_A 42 LETRLIPD------EQAIIEQTLCELVDEMSCHLVLTTGGTG 77 (195)
T ss_dssp EEEEEEES------CHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred EEEEEeCC------CHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 56677888 4566777777665545789999999875
No 72
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=27.08 E-value=93 Score=23.81 Aligned_cols=38 Identities=5% Similarity=0.018 Sum_probs=26.9
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE 92 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~ 92 (289)
..+..++.| +...+.+++.+.....+.|+||.+|=.+.
T Consensus 46 v~~~~iv~D------d~~~i~~~l~~~~~~~~~DlVittGG~g~ 83 (167)
T 1uuy_A 46 VVATAVVPD------EVERIKDILQKWSDVDEMDLILTLGGTGF 83 (167)
T ss_dssp EEEEEEECS------CHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EeEEEEcCC------CHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 345677888 45667777766554357899999998753
No 73
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=26.59 E-value=97 Score=23.65 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=26.6
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE 92 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~ 92 (289)
..+..++.| +...+.+++.+..+..+.|+||.+|=.+.
T Consensus 37 v~~~~iv~D------d~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 37 VAAYELVPD------EPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp EEEEEEECS------CHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EeEEEEcCC------CHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 345667788 45667777766554336899999998754
No 74
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=26.39 E-value=54 Score=27.49 Aligned_cols=44 Identities=11% Similarity=0.097 Sum_probs=26.1
Q ss_pred EEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCcc
Q 022941 179 CIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCI 225 (289)
Q Consensus 179 ~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~ 225 (289)
-+|+.|||++-.+...- .......+....+.++++.+ ++-|+-.
T Consensus 61 dlIitHHP~~f~~~~~~--~~~~~~~~~i~~li~~~I~l-ya~Ht~l 104 (267)
T 2fyw_A 61 DLIIVKHAPIFRPIKDL--LASRPQNQIYIDLIKHDIAV-YVSHTNI 104 (267)
T ss_dssp SEEEESSCSCCSCCCCC--CTTSHHHHHHHHHHHTTCEE-EECSHHH
T ss_pred CEEEECCccccCCcccc--ccCchHHHHHHHHHHCCCeE-EEeeccc
Confidence 38899999976543211 11222344556677788754 6777744
No 75
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.11 E-value=87 Score=24.40 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhhCCccEEEEcCCCC
Q 022941 65 QTLLLKQMEDVAKSYDARFVINTSELG 91 (289)
Q Consensus 65 ~~~~~~~l~~~~~~~~pdfvv~~GD~~ 91 (289)
...+.+++.+..++.+.|+||.+|=.+
T Consensus 66 ~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 66 KIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 445555665554433489999998764
No 76
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=26.10 E-value=55 Score=27.05 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=25.4
Q ss_pred EEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCcc
Q 022941 180 IVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCI 225 (289)
Q Consensus 180 iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~ 225 (289)
+++.|||++- +.... ......+....+.++++.+ ++-|+-.
T Consensus 60 lIitHHp~~f-~~~~~---~~~~~~~~i~~li~~~I~l-y~~Ht~l 100 (242)
T 2yyb_A 60 FLIVHHGLFW-GKPFP---IVGHHKRRLETLFQGGINL-YAAHLPL 100 (242)
T ss_dssp EEEEEECSCS-SCCCC---SCHHHHHHHHHHHHTTCEE-EECSHHH
T ss_pred EEEECCCcCc-Ccccc---cccHHHHHHHHHHHCCCeE-EEeccHH
Confidence 8899999976 54311 1223445556677788754 6778743
No 77
>3omb_A Extracellular solute-binding protein, family 1; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG; 2.10A {Bifidobacterium longum subsp}
Probab=25.61 E-value=47 Score=30.48 Aligned_cols=12 Identities=0% Similarity=-0.258 Sum_probs=8.4
Q ss_pred CCccEEEEEEeC
Q 022941 46 KGLDFYFISVTG 57 (289)
Q Consensus 46 ~~~~~~f~~~gD 57 (289)
.+..++|.+.++
T Consensus 38 ~~~~l~~~~~~~ 49 (535)
T 3omb_A 38 GKPIVTVLVKKN 49 (535)
T ss_dssp CCBEEEEEEEEC
T ss_pred CCceEEEEEecC
Confidence 345688887776
No 78
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=23.74 E-value=1.1e+02 Score=23.84 Aligned_cols=36 Identities=14% Similarity=0.316 Sum_probs=25.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE 92 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~ 92 (289)
...+++| +...+.+++.+..+..+.|+||.+|=.+.
T Consensus 45 ~~~iv~D------d~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 45 EYRVIPD------ERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp EEEEECS------CHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EEEEcCC------CHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 5667888 45667777766554347899999998753
No 79
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, ME palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=23.15 E-value=1.6e+02 Score=21.86 Aligned_cols=22 Identities=0% Similarity=-0.041 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhC-CeEEEeCCCc
Q 022941 203 YEPLHHIFMKFG-VNTYLSKHGC 224 (289)
Q Consensus 203 ~~~l~~ll~~~~-V~~vl~GH~H 224 (289)
.+.+..+|++++ ..+.+.||+=
T Consensus 53 L~~ia~~L~~~~~~~i~I~GhtD 75 (149)
T 2k1s_A 53 LTGVAMVLKEYPKTAVNVIGYTD 75 (149)
T ss_dssp HHHHHHHHHHCTTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCceEEEEEEcC
Confidence 445555666553 4566777764
Done!