BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022948
(289 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM
Length = 463
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS
AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound
Length = 462
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 209 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 268
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 269 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 323
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 324 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 378
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 379 VTEDSKFA 386
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate
pdb|2H5A|X Chain X, Complex Of The Enzyme PmmPGM WITH XYLOSE 1-Phosphate
Length = 463
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
S108a Mutant From P. Aeruginosa
Length = 463
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1P5G|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCJ|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCM|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
Length = 463
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate
Bound
Length = 462
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 209 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 268
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 269 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 323
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 324 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 378
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 379 VTEDSKFA 386
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH
ITS SUBSTRATE
pdb|3C04|A Chain A, Structure Of The P368g Mutant Of PmmPGM FROM P. AERUGINOSA
Length = 463
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG +++ G+ + K + E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFGSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
From P.aeruginosa
Length = 463
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A V NADLG+ FD D DR GVV N G I D+L+ L +
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLXLFAK 269
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
V+ +PG I+ D + + L I+ GG ++ G+ + K E G L
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVXWKTGHSLIKKK---XKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
E SGH KE +F DDG Y + +++++ S+ + D+ P E+ +
Sbjct: 325 EXSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
+ + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of
PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein
(Bth_i1489)from Burkholderia Thailandensis
Length = 485
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
FPNH P+P + A + +A++G FD D DR GVV G I D+ + L +
Sbjct: 232 FPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAE 291
Query: 62 IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
VL +PG I+ D + + L +++ ++GG +++ G+ V K L E G L
Sbjct: 292 EVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAK---LRETG--APLAG 346
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRM 152
E SGH K+ ++ DDG Y +++ + R+
Sbjct: 347 EMSGHVFFKDRWYGFDDGLYTGARLLEILARV 378
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|C Chain C, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|D Chain D, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
Length = 455
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 2 FPNHIPNPED---KTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIAL 58
FP P P + K M + +A AD GV D D DR+ +D G I GDK AL
Sbjct: 212 FPARNPEPNEENLKEFMEIVKAL----GADFGVAQDGDADRAVFIDENGRFIQGDKTFAL 267
Query: 59 MSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETH 118
++ VLKE G +VT TS L G +VG ++ + ++ N I
Sbjct: 268 VADAVLKEKGGGLLVTTVATSNLLDDIAKKHGAKVMRTKVG-DLIVARALYENNGTIGG- 325
Query: 119 LMMETSGHGALKENYFLDDGAYMVVKII 146
E +G E+ DGA V K++
Sbjct: 326 ---EENGGVIFPEHVLGRDGAMTVAKVV 350
>pdb|3PDK|A Chain A, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
pdb|3PDK|B Chain B, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
Length = 469
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 22 VLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH---PGTTIVTDART 78
V E AD+G+ FD D DR VD KGN ++GD+ I + A +KE T+V+ +
Sbjct: 249 VKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQ-IMFICAKYMKETGQLKHNTVVSTVMS 307
Query: 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDG 138
++ K + G VG R V+++ + G +L E SGH L + DG
Sbjct: 308 NLGFYKALEANGITSDKTAVGDRYVMEE---MKRGGY--NLGGEQSGHIILLDYITTGDG 362
Query: 139 AYMVVKI--IIQMVRMKL 154
+++ I++M + L
Sbjct: 363 MLSALQLVNIMKMTKKPL 380
>pdb|3I3W|A Chain A, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
pdb|3I3W|B Chain B, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
Length = 443
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 13 TAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
T ++ + AV E ADLG+ D D DR +VD G I+GD ++ +++
Sbjct: 218 TCVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILA 265
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 72 IVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKE 131
+VT++ + F+T R G H + N+ID H N + I HG+
Sbjct: 7 VVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIP---QRNPHAHGSGAF 63
Query: 132 NYF--LDD-----GAYMVVKIIIQ---MVRMKLEGSDEGIGSLIKD 167
YF DD G+ M KI + + R G D+G ++D
Sbjct: 64 GYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRD 109
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 22 VLENNADLGVVFDTDVDRSGVVDNKG--NPINGDKLIALMSAIVLKEHPGTTIVTDARTS 79
L++ DL + D D DR G+V +G NP N AL + PG + A TS
Sbjct: 274 ALKDRFDLAIGNDPDADRHGIVTPRGLMNP-NHYLAAALHHLYTTRSWPGAKVGKTAVTS 332
Query: 80 MALTKFITDRGGNHCLYRVGYRNVI 104
L + G VG+++ +
Sbjct: 333 ALLDRVAQALGREVYETPVGFKHFV 357
>pdb|2F7L|A Chain A, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
pdb|2F7L|B Chain B, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
Length = 455
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
+F P P + + T V DLGV D D DR+ +D++G GD+ L+S
Sbjct: 209 LFSARQPEPTFDS-LKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLS 267
Query: 61 AIVLKEHPGTT--IVTDARTSMALTKFIT 87
++P IVT +S + ++++
Sbjct: 268 YWASVKNPKAIKKIVTAVSSSSLVEEYLS 296
>pdb|2WZS|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|G Chain G, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
pdb|2WZS|H Chain H, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Mannoimidazole
Length = 738
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 202 YIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQS 261
Y+E G W S G GC+V +N + +DA M KV D + G IH ++
Sbjct: 357 YLESGFFPEWA--SPG----HRGCMVGNNSASILVDAYMKGVKVDDIKTLYEGLIHGTEN 410
Query: 262 IH 263
+H
Sbjct: 411 VH 412
>pdb|2WVZ|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WVZ|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|G Chain G, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW0|H Chain H, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482
pdb|2WW1|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW1|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|B Chain B, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|C Chain C, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|D Chain D, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|E Chain E, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
pdb|2WW3|F Chain F, Structure Of The Family Gh92 Inverting Mannosidase Bt3990
From Bacteroides Thetaiotaomicron Vpi-5482 In Complex
With Thiomannobioside
Length = 744
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 202 YIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQS 261
Y+E G W S G GC+V +N + +DA M KV D + G IH ++
Sbjct: 357 YLESGFFPEWA--SPG----HRGCMVGNNSASILVDAYMKGVKVDDIKTLYEGLIHGTEN 410
Query: 262 IH 263
+H
Sbjct: 411 VH 412
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,955,663
Number of Sequences: 62578
Number of extensions: 374769
Number of successful extensions: 1016
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1001
Number of HSP's gapped (non-prelim): 25
length of query: 289
length of database: 14,973,337
effective HSP length: 98
effective length of query: 191
effective length of database: 8,840,693
effective search space: 1688572363
effective search space used: 1688572363
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)