Query 022948
Match_columns 289
No_of_seqs 119 out of 1345
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 13:49:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uw2_A Phosphoglucomutase/phos 100.0 8.9E-54 3E-58 415.0 26.0 241 1-288 231-472 (485)
2 2f7l_A 455AA long hypothetical 100.0 4.5E-53 1.5E-57 407.9 26.6 239 1-288 209-450 (455)
3 1p5d_X PMM, phosphomannomutase 100.0 1.6E-52 5.5E-57 404.8 28.4 241 1-288 209-450 (463)
4 1wqa_A Phospho-sugar mutase; a 100.0 2.9E-52 1E-56 402.2 24.8 238 1-288 211-448 (455)
5 1tuo_A Putative phosphomannomu 100.0 2.9E-52 9.8E-57 403.1 24.5 242 1-288 216-460 (464)
6 3na5_A Phosphoglucomutase; iso 100.0 4E-49 1.4E-53 389.1 24.9 253 1-288 289-561 (570)
7 4hjh_A Phosphomannomutase; str 100.0 1.2E-48 4.3E-53 379.2 23.4 246 1-288 213-469 (481)
8 3pmg_A Alpha-D-glucose-1,6-bis 100.0 3.4E-48 1.1E-52 382.0 23.0 250 1-276 255-522 (561)
9 3i3w_A Phosphoglucosamine muta 100.0 3.1E-48 1.1E-52 372.7 18.7 228 1-288 209-436 (443)
10 3pdk_A Phosphoglucosamine muta 100.0 7.3E-48 2.5E-52 372.4 19.1 226 1-288 231-460 (469)
11 2z0f_A Putative phosphoglucomu 100.0 1.1E-46 3.7E-51 369.1 21.5 246 7-287 261-516 (524)
12 1kfi_A Phosphoglucomutase 1; p 100.0 5E-46 1.7E-50 367.7 24.0 250 1-276 269-535 (572)
13 2dka_A Phosphoacetylglucosamin 100.0 6.1E-43 2.1E-47 343.8 5.7 238 2-288 258-541 (544)
14 1wjw_A Phosphoacetylglucosamin 99.4 5.2E-14 1.8E-18 110.2 1.3 49 234-288 43-91 (112)
15 3brc_A Conserved protein of un 53.5 14 0.00047 29.3 3.9 51 2-52 69-124 (156)
16 3ulb_A Target of rapamycin com 42.1 31 0.001 26.4 4.3 33 254-287 77-110 (121)
17 1vlj_A NADH-dependent butanol 32.1 38 0.0013 31.1 4.1 32 2-34 78-109 (407)
18 2hc5_A ORF 99, hypothetical pr 31.7 1E+02 0.0035 23.2 5.8 51 12-62 41-97 (117)
19 1oj7_A Hypothetical oxidoreduc 29.7 40 0.0014 30.9 3.8 32 2-34 83-114 (408)
20 3iv7_A Alcohol dehydrogenase I 28.4 50 0.0017 29.9 4.2 31 2-33 65-95 (364)
21 3bfj_A 1,3-propanediol oxidore 28.2 48 0.0016 30.0 4.1 32 2-34 69-100 (387)
22 1rrm_A Lactaldehyde reductase; 26.0 47 0.0016 30.1 3.5 32 2-34 65-96 (386)
23 3dtg_A Branched-chain amino ac 25.6 1.6E+02 0.0054 26.6 7.1 76 18-108 219-306 (372)
24 3he8_A Ribose-5-phosphate isom 25.6 91 0.0031 24.6 4.7 35 2-36 32-67 (149)
25 3hl0_A Maleylacetate reductase 24.3 66 0.0023 28.9 4.2 32 2-34 64-95 (353)
26 3jzd_A Iron-containing alcohol 23.6 63 0.0022 29.1 3.9 32 2-34 66-97 (358)
27 3nol_A Glutamine cyclotransfer 22.5 50 0.0017 28.6 2.9 22 27-48 226-247 (262)
28 3g12_A Putative lactoylglutath 22.4 1.1E+02 0.0037 22.3 4.5 38 14-51 76-116 (128)
29 3l6b_A Serine racemase; pyrido 22.0 3.9E+02 0.013 23.4 8.9 40 70-109 102-141 (346)
30 3ph3_A Ribose-5-phosphate isom 21.6 1.2E+02 0.004 24.5 4.7 36 2-37 52-88 (169)
31 2gk4_A Conserved hypothetical 21.4 2.4E+02 0.0083 23.7 6.9 52 13-64 170-228 (232)
32 4fak_A Ribosomal RNA large sub 21.4 66 0.0022 25.8 3.1 31 35-65 72-102 (163)
33 3k7p_A Ribose 5-phosphate isom 21.3 1.1E+02 0.0039 24.8 4.6 35 2-36 56-91 (179)
34 3mbr_X Glutamine cyclotransfer 20.3 60 0.0021 27.7 2.9 22 27-48 205-226 (243)
No 1
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=8.9e-54 Score=415.00 Aligned_cols=241 Identities=24% Similarity=0.438 Sum_probs=211.8
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~ 80 (289)
+||+++|||+.+++++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++++++++..||+|++||.
T Consensus 231 ~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~~~~~~~vv~~v~ss~ 310 (485)
T 3uw2_A 231 NFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTR 310 (485)
T ss_dssp TCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence 59999999999999999999999999999999999999999999999999999999999999999888888999999999
Q ss_pred HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCcc-CCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE 159 (289)
Q Consensus 81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~-~~Dgi~a~l~ll~e~~~~~~~~~~~ 159 (289)
.++++++++|+++++|+|||+||+++|.+.+ +.||||+|||++|+++++ ++|||+++++++ ++++. ++
T Consensus 311 ~l~~~~~~~g~~~~~t~vG~k~i~~~m~~~~-----~~~ggE~SG~~~f~~~~~~~~Dgi~aal~ll-e~la~----~~- 379 (485)
T 3uw2_A 311 NLARWVREKGGEPLMWKTGHSLVKAKLRETG-----APLAGEMSGHVFFKDRWYGFDDGLYTGARLL-EILAR----VA- 379 (485)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHHHC-----CSEEECTTSCEEETTTTCSSBCHHHHHHHHH-HHHTT----SS-
T ss_pred HHHHHHHHcCCEEEEEcCChHHHHHHHHhhc-----ccceecccCcEeeccccCCCCcHHHHHHHHH-HHHHh----cC-
Confidence 9999999999999999999999999999987 479999999999999765 799999999776 99887 77
Q ss_pred CHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccC
Q 022948 160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR 239 (289)
Q Consensus 160 ~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~D 239 (289)
+|+++++++|.++.+.+.+++|+. .+ +.++|++|.+... +++ ..+++.+|
T Consensus 380 ~lsel~~~lp~~~~~~~~~v~~~~----~~--~~~~~~~l~~~~~---~~~---------------------~~~~~~~D 429 (485)
T 3uw2_A 380 DPSALLNGLPNAVSTPELQLKLEE----GE--NVKLIDKLRADAK---FDG---------------------ADEVVTID 429 (485)
T ss_dssp CHHHHHHTSCCCEECCCEEC------------CTHHHHHHHHSCC---CTT---------------------CSEEECSS
T ss_pred CHHHHHHHhhHhhCCceEEEeCCc----hh--HHHHHHHHHhhhc---ccc---------------------cccccccc
Confidence 999999999987755556777763 22 2478999877542 111 12467899
Q ss_pred ceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 240 Giki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
|+|+.+ ++||+|||||||||++|||+||++++.++++++.+.+
T Consensus 430 Gvrv~~------~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~ 472 (485)
T 3uw2_A 430 GLRVEY------PDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRR 472 (485)
T ss_dssp SEEEEE------TTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred eEEEEe------CCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHH
Confidence 999999 7899999999999999999999999999999988764
No 2
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.5e-53 Score=407.91 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=210.5
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhC--CCCeEEEcccC
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDART 78 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~--~~~~vv~t~~s 78 (289)
+||+++|||+ +++++.+.+.|++.+||+|+++||||||++++|++|++++||++++|+++++++.+ ++..||.|++|
T Consensus 209 ~F~~~~p~p~-~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~g~~l~gd~i~~lla~~l~~~~~~~~~~vv~tv~s 287 (455)
T 2f7l_A 209 LFSARQPEPT-FDSLKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVKNPKAIKKIVTAVSS 287 (455)
T ss_dssp TCTTSCSSCC-TTTSHHHHHHHHHTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHTCTTSCSEEEEETTS
T ss_pred CCCCCCcCcc-hHHHHHHHHHHHHcCCCEEEEECCCCCeEEEEcCCCeEEChHHHHHHHHHHHHHhCccCCCeEEEEecc
Confidence 5999999999 47899999999999999999999999999999999999999999999999999876 45689999999
Q ss_pred CHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhcCCC
Q 022948 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSD 158 (289)
Q Consensus 79 s~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~~~~ 158 (289)
|.+++++++++|+++++|+|||+|+.++|.+.+ ++||||+|||++|+++++++|||+++++++ ++++. +|
T Consensus 288 s~~l~~~a~~~g~~~~~t~~G~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~l-e~~a~----~g 357 (455)
T 2f7l_A 288 SSLVEEYLSKYNIQVDWTKVGSVDIAHKVADEN-----ALAGFEENGGFMYPPHQYVRDGAMSFALML-ELLAN----EN 357 (455)
T ss_dssp CTHHHHHHHTTTCEEEEECSCHHHHHHHHHHTT-----CSEEEETTEEEEBTTTBSSCCHHHHHHHHH-HHHHH----HT
T ss_pred cHHHHHHHHHcCCEEEEEcCcHHHHHHHHHhcC-----cEEEEcCcCcEEECCcCCCCCHHHHHHHHH-HHHHh----hC
Confidence 999999999999999999999999999999876 589999999999999999999999999776 99987 79
Q ss_pred CCHHHHHHHchhhhccceeEEEeccChhhHhhhHH-HHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccc
Q 022948 159 EGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGS-EAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAID 237 (289)
Q Consensus 159 ~~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~-~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
+||+++++++|.++ +...+++|+. .+ +. ++|++|++..+.. + ..+..
T Consensus 358 ~~L~ell~~~~~~~-~~~~~v~~~~----~~--~~~~~~~~l~~~~~~~---~----------------------~~~~~ 405 (455)
T 2f7l_A 358 VSSAELFDRLPKYY-LVKTKVDLKP----GL--MVEEIYKKILEVYSTS---S----------------------VKAIT 405 (455)
T ss_dssp CCHHHHHHTSCCCE-EEEEEEECCT----TC--CHHHHHHHHHHHHCCT---T----------------------SEEEC
T ss_pred CCHHHHHHhCCCCe-eeeEeEEcCc----HH--HHHHHHHHHHHhchhc---c----------------------ccccc
Confidence 99999999998643 3355666653 21 23 6888887754321 1 23568
Q ss_pred cCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 238 ARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 238 ~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
+||+|+.| ++||++||||||||++|||+|+.+++.++++++.+.+
T Consensus 406 ~DGlr~~~------~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~ 450 (455)
T 2f7l_A 406 IDGVKIIG------KDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKK 450 (455)
T ss_dssp SSSEEEEE------TTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CceEEEEe------CCcEEEEeeCCCCcEEEEEEEECCHHHHHHHHHHHHH
Confidence 99999999 6789999999999999999999999999999988764
No 3
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=1.6e-52 Score=404.83 Aligned_cols=241 Identities=25% Similarity=0.419 Sum_probs=213.2
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~ 80 (289)
+||+++|||+.|++++.+.+.|++.+||+|+++||||||++++|++|++++||++++|++.+++++.++..||.|++||.
T Consensus 209 ~f~~~~p~p~~~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~L~a~~l~~~~~~~~vv~~v~ss~ 288 (463)
T 1p5d_X 209 NFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTR 288 (463)
T ss_dssp TCCSSCSCTTSGGGGHHHHHHHHHTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHhCCCEEEEECCCCCeEEEEeCCCcEeCHHHHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence 59999999998899999999999999999999999999999999999999999999999999999888778999999999
Q ss_pred HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCcc-CCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE 159 (289)
Q Consensus 81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~-~~Dgi~a~l~ll~e~~~~~~~~~~~ 159 (289)
.++++++++|+++++|+|||||+.++|.+.+ +.||||+|||++|++++. ++||++++++++ ++++. +|+
T Consensus 289 ~l~~~~~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~~Dgi~aal~~l-e~~a~----~g~ 358 (463)
T 1p5d_X 289 RLIALISGYGGRPVMWKTGHSLIKKKMKETG-----ALLAGEMSGHVFFKERWFGFDDGIYSAARLL-EILSQ----DQR 358 (463)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHHHC-----CSEEECTTSBEEETTTTCSSBCHHHHHHHHH-HHHHT----CSS
T ss_pred HHHHHHHHcCCEEEEeCCcHHHHHHHHHhcC-----CceeecCCCcEEeccccCCCCcHHHHHHHHH-HHHHH----hCC
Confidence 9999999999999999999999999999876 479999999999999555 689999999776 99987 899
Q ss_pred CHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccC
Q 022948 160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR 239 (289)
Q Consensus 160 ~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~D 239 (289)
+|+++++++|++|.+...+++|+. .+ +.++|+++++.. .+++ .+++++|
T Consensus 359 ~Ls~ll~~l~~~~~~~~~~v~~~~----~~--~~~~~~~l~~~~---~~~~----------------------~~~~~~D 407 (463)
T 1p5d_X 359 DSEHVFSAFPSDISTPEINITVTE----DS--KFAIIEALQRDA---QWGE----------------------GNITTLD 407 (463)
T ss_dssp CHHHHHHTSCCCEECCCEEEECCT----TT--HHHHHHHHHHHC---CCCS----------------------SEEECSS
T ss_pred CHHHHHHHhhHhhCceeEEEEcCc----hh--HHHHHHHHHhcc---ccCC----------------------Ccccccc
Confidence 999999999987755467777763 22 347888884432 1111 1356899
Q ss_pred ceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 240 Giki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
|+|+.+ ++||++||||||||++|||+|+.+++.++++++.+.+
T Consensus 408 Glr~~~------~~gw~lvRpSgTEP~~rvy~Ea~~~~~~~~l~~~~~~ 450 (463)
T 1p5d_X 408 GVRVDY------PKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRN 450 (463)
T ss_dssp SEEEEE------TTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHH
T ss_pred eEEEEe------cCcEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHH
Confidence 999999 7799999999999999999999999999999988764
No 4
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.9e-52 Score=402.21 Aligned_cols=238 Identities=24% Similarity=0.292 Sum_probs=210.8
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~ 80 (289)
+||++.|+|. +++++.+.+.|++.+||+|+++||||||++++|++|++++||++++|+++++++.+++..||.|++||.
T Consensus 211 ~f~~~~~~p~-~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~~~~vv~tv~ss~ 289 (455)
T 1wqa_A 211 YFPARNPEPN-EENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGLLVTTVATSN 289 (455)
T ss_dssp TCSSSCSCCC-TTTTHHHHHHHHHHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHHTSCEEEEETTSCT
T ss_pred CCCCCCCCCc-hhHHHHHHHHHHHcCCCEEEEECCCCCeEEEEeCCCCEEChhHHHHHHHHHHHHhCCCCeEEEeecCcH
Confidence 5999999997 689999999999999999999999999999999999999999999999999998776668999999999
Q ss_pred HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhcCCCCC
Q 022948 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEG 160 (289)
Q Consensus 81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~~~~~~ 160 (289)
+++++++++|+++++|+|||||+.++|.+.+ ++||||+|||++|+++.+++|||+++++++ ++++. +|+|
T Consensus 290 ~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a~l~~l-e~l~~----~g~~ 359 (455)
T 1wqa_A 290 LLDDIAKKHGAKVMRTKVGDLIVARALYENN-----GTIGGEENGGVIFPEHVLGRDGAMTVAKVV-EIFAK----SGKK 359 (455)
T ss_dssp HHHHHHHHTTCEEEEECSSTTHHHHHHHHTT-----CSEEEETTEEEECTTTCSSCCHHHHHHHHH-HHHHH----HCSC
T ss_pred HHHHHHHHCCCEEEEEcCcHHHHHHHHHhCC-----ceEEEcCcCcEEECCcCcCccHHHHHHHHH-HHHHh----cCCC
Confidence 9999999999999999999999999999876 589999999999999999999999999776 99987 7999
Q ss_pred HHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccCc
Q 022948 161 IGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240 (289)
Q Consensus 161 l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~DG 240 (289)
|+++++++|.++ +...+++|+ +. +.++|+++++.+++. + ..+..+||
T Consensus 360 L~~~~~~l~~~~-~~~~~v~~~----~~---~~~~~~~l~~~~~~~---~----------------------~~~~~~DG 406 (455)
T 1wqa_A 360 FSELIDELPKYY-QIKTKRHVE----GD---RHAIVNKVAEMARER---G----------------------YTVDTTDG 406 (455)
T ss_dssp HHHHHHTSCCCE-EEEECCBCC----SS---HHHHHHHHHHHHHHT---T----------------------CEEECTTS
T ss_pred HHHHHHhccccc-EeeEeeEcC----cH---HHHHHHHHHHhhHhh---c----------------------cccccCce
Confidence 999999999643 334555554 32 247899988765431 1 13568999
Q ss_pred eEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 241 YRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 241 iki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
+|+.| ++||++||||||||++|||+|+.+++.++++++.+.+
T Consensus 407 lr~~~------~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~l~~~~~~ 448 (455)
T 1wqa_A 407 AKIIF------EDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIE 448 (455)
T ss_dssp EEEEC------SSCEEEECCCSSSSBCCEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEe------cCcEEEEEeCCCCceEEEEEEECCHHHHHHHHHHHHH
Confidence 99999 6679999999999999999999999999999988764
No 5
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-52 Score=403.12 Aligned_cols=242 Identities=18% Similarity=0.218 Sum_probs=197.2
Q ss_pred CCCCCCCCCCChHHHHHHHHHHH-hcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCC
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVL-ENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTS 79 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~-~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss 79 (289)
+||+++|||+ ++++..+.+.++ +.+||+|+++||||||++++|++|++++||++++|++.++++++++..||.|++||
T Consensus 216 ~Fp~~~p~p~-~~~~~~l~~~v~~~~~adlgia~DgDaDR~~vvd~~G~~l~gd~i~~Lla~~l~~~~~~~~vv~tv~ss 294 (464)
T 1tuo_A 216 LFHGVNPEPI-PKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKGHRGRAVKNFAVT 294 (464)
T ss_dssp TGGGSCSCCS-GGGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHTTCCSEEEEETTSC
T ss_pred CCCCCCcCCC-chhHHHHHHHHHhccCCCEEEEECCCCCeEEEEeCCCEEECHHHHHHHHHHHHHhhCCCCeEEEeecch
Confidence 5999999998 688999999999 99999999999999999999999999999999999999999866666899999999
Q ss_pred HHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948 80 MALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDE 159 (289)
Q Consensus 80 ~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~~~~~ 159 (289)
.+++++++++|+++++|+|||||+.++|.+.+ ++||||+|||++|+++.+++|||+++++++ ++++. +|+
T Consensus 295 ~~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~l-e~~a~----~g~ 364 (464)
T 1tuo_A 295 WLLDRLGERLGFGVTTTPVGFKWIKEEFLKGD-----CFIGGEESGGVGYPEHLPERDGILTSLLLL-ESVAA----TGK 364 (464)
T ss_dssp THHHHHHHHHTCCEEEECSSHHHHHHHHTTTC-----EEEEECTTSBEEETTTEEEECHHHHHHHHH-HHHHH----HSC
T ss_pred HHHHHHHHHcCCeEEEecCcHHHHHHHHHhcC-----cEEEEccceeEEECCcCcCCCHHHHHHHHH-HHHHh----hCC
Confidence 99999999999999999999999999998865 689999999999999999999999999776 99987 799
Q ss_pred CHHHHHHHchhhhc--cceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccc
Q 022948 160 GIGSLIKDLEEPLE--SIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAID 237 (289)
Q Consensus 160 ~l~~ll~~lp~~~~--~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
||+++++++|+.|+ +++.++++. |++. .+|+++++. ..+.+.++ ..+.+
T Consensus 365 ~L~ell~~l~~~~~~~~~~~~~~v~--~~~~-----~~~~~l~~~---~~~~~~~~-------------------~~v~~ 415 (464)
T 1tuo_A 365 DLAEQFKEVEALTGLTHAYDRLDLP--LKAP-----LDLTPFREP---RPLAGLTP-------------------KGVDT 415 (464)
T ss_dssp CHHHHHHHHHHHHTCCCEEEEEC-------------------------CCCTTCCE-------------------EEEEC
T ss_pred CHHHHHHHHHHHcCccccceEEeEE--eCCH-----HHHHhhhhh---HhhCCCce-------------------eEEEc
Confidence 99999988877665 233444444 3232 277777652 23334322 24568
Q ss_pred cCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 238 ARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 238 ~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
+||+|+.| ++||++||||||||++|||+|+.+++.++++++.+.+
T Consensus 416 ~DGl~~~~------~~~w~lvRpSgTEP~lrvy~Ea~~~~~~~~l~~~~~~ 460 (464)
T 1tuo_A 416 LDGVKWLY------EEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARK 460 (464)
T ss_dssp SSSEEEEE------TTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHT
T ss_pred CCeEEEEE------CCEEEEEEcCCCccEEEEEEEeCCHHHHHHHHHHHHH
Confidence 99999999 5599999999999999999999999999999998875
No 6
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=4e-49 Score=389.07 Aligned_cols=253 Identities=16% Similarity=0.164 Sum_probs=208.1
Q ss_pred CCCCCCC--------CCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCC---
Q 022948 1 MFPNHIP--------NPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPG--- 69 (289)
Q Consensus 1 ~Fp~~~P--------~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~--- 69 (289)
+||+++| ||+.+.+++.+.+. +.+||+|+++||||||++++|+ |++++||++++|++.++++++++
T Consensus 289 ~F~~~~p~~~G~i~~~~~~~~al~~l~~~--~~~aDlgia~DgDaDR~~ivd~-g~~l~gd~~lal~a~~ll~~~~~~~~ 365 (570)
T 3na5_A 289 TFRFMHLDKDGAIRMDCSSECAMAGLLAL--RDKFDLAFANDPDYDRHGIVTP-AGLMNPNHYLAVAINYLFQHRPLWGK 365 (570)
T ss_dssp TCTTSBCCTTSSCCCCTTCTTTTHHHHTT--GGGCSEEEEECTTSCBEEEEET-TEECCHHHHHHHHHHHHTTSCTTSCT
T ss_pred CCCCCCCCcccccCCCCCChHHHHHHHHh--ccCCCEEEEECCCCCeEEEEEC-CEEECHhHHHHHHHHHHHHhCCCCCC
Confidence 4787755 67777788888765 8899999999999999999999 99999999999999999987653
Q ss_pred -CeEEEcccCCHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCC-----CccCCCHHHHHH
Q 022948 70 -TTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKE-----NYFLDDGAYMVV 143 (289)
Q Consensus 70 -~~vv~t~~ss~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~-----~~~~~Dgi~a~l 143 (289)
..|+.|++||.+++++++++|+++++|+||||||.++|.+.+ ++||||+|||++|+. +.+++|||++++
T Consensus 366 ~~~v~~t~vSs~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~f~~~~g~~~~~dkDGi~aal 440 (570)
T 3na5_A 366 DVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGS-----FGFGGEESAGASFLRFDGTPWSTDKDGIIMCL 440 (570)
T ss_dssp TCEEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTS-----EEEEEETTTEEEECCTTSCCSCSSCCHHHHHH
T ss_pred CceEEEeeCchHHHHHHHHHCCCceEEecccHHHHHHHHHhcC-----CeEEEeccCCcccccccccceeecCcHHHHHH
Confidence 458889999999999999999999999999999999999865 689999999999987 677899999999
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHchhhhcc-ceeEEEeccChhhHhhhHHHHHHHHHhhh-hhcccCCccccccCcccc
Q 022948 144 KIIIQMVRMKLEGSDEGIGSLIKDLEEPLES-IELRMNIISEPRYAKAKGSEAIEEFRKYI-EEGRLQGWELDSCGDCWV 221 (289)
Q Consensus 144 ~ll~e~~~~~~~~~~~~l~~ll~~lp~~~~~-~~~~i~~~~~~~~~~~~~~~~m~~l~~~~-~~~~~~~~~v~~~~~~~~ 221 (289)
+++ ||++. +|++|++++++||+.|.. .+.++.++ |++.+ .++|++|++.. ....+++.+|+.+-++.
T Consensus 441 ~~l-e~~a~----~g~~lsell~~l~~~yg~~~~~r~~~~--~~~~~---k~~m~~l~~~~~~~~~~~g~~i~~~~~~~- 509 (570)
T 3na5_A 441 LAA-EITAV----TGKNPQEHYNELAARFGAPSYNRLQAS--ATSAQ---KAALSKLSPEMVSASTLAGDPITARLTAA- 509 (570)
T ss_dssp HHH-HHHHH----HSSCHHHHHHHHHHHHCCCEEEEEEEE--CCHHH---HHHHHTCCGGGCCCSEETTEECCEEEEEC-
T ss_pred HHH-HHHHH----hCCCHHHHHHHHHHHhCCceeEEecCC--CCHHH---HHHHHHhhhccCcchhhcCcceEEEeecc-
Confidence 765 99998 799999999999998843 35577776 32432 25777775432 11345565555443322
Q ss_pred ccccccCCCCCCcccccCceEEEEeecccCCceEEEEecCCCCccEEEEEEe-CChhHHHHHHHHHhc
Q 022948 222 SEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQS-MVPGGCRSITKSLRD 288 (289)
Q Consensus 222 ~~~~~~~~~~~~~~~~~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea-~~~~~~~~l~~~~~~ 288 (289)
...+..+||+|+.| ++||+++|||||||++|||+|+ .+++.++++++++++
T Consensus 510 ----------~~~~~~iDGlkv~~------~dgW~lvRpSgTEP~lriy~Ea~~~~e~l~~l~~~~~~ 561 (570)
T 3na5_A 510 ----------PGNGASIGGLKVMT------DNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVE 561 (570)
T ss_dssp ----------TTTCCEEEEEEEEC------SSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred ----------cCCcCCCCeEEEEe------cCcEEEEEECCCCCeEEEEEEcCCCHHHHHHHHHHHHH
Confidence 12346799999999 7899999999999999999999 799999999887754
No 7
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=1.2e-48 Score=379.20 Aligned_cols=246 Identities=15% Similarity=0.070 Sum_probs=200.2
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~ 80 (289)
+||+++|+|..|++++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++. ...|+.|++||.
T Consensus 213 ~f~~~~~~p~~~e~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~l~~L~a~~l~----~~~vv~~v~ss~ 288 (481)
T 4hjh_A 213 IFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVG----ADTLVTPVTSNT 288 (481)
T ss_dssp SCCCCCTTSCCHHHHHHHHHHHTSTTCSEEEEECTTSSSEEEECTTSCEECHHHHHHHHHHHTT----CSEEEEETTSCT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCceEEEcCCCCEEChHHHHHHHHHHhh----cCcEEEEEcChH
Confidence 4888889998899999999999999999999999999999999999999999999999999863 236999999999
Q ss_pred HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCC----------ccCCCHHHHHHHHHHHHH
Q 022948 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKEN----------YFLDDGAYMVVKIIIQMV 150 (289)
Q Consensus 81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~----------~~~~Dgi~a~l~ll~e~~ 150 (289)
.++++ +| ++++|+|||+||.++|++..+.|.+++||||+|||++|+++ .+++|||+++++++ +++
T Consensus 289 ~l~~~---~~-~~~~t~vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~Dgi~a~l~~l-e~~ 363 (481)
T 4hjh_A 289 ALESR---FP-KVLRTRVGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPILACL-ATV 363 (481)
T ss_dssp THHHH---CS-CEEEECSSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEEESHHHHHHHH-HHH
T ss_pred HHHHh---cC-ceEEeccchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCccHHHHHHHHH-HHH
Confidence 99887 55 99999999999999999864433347999999999999874 35899999999776 998
Q ss_pred HHHhcCCCCCHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhh-hhcccCCccccccCccccccccccCC
Q 022948 151 RMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYI-EEGRLQGWELDSCGDCWVSEGCLVDS 229 (289)
Q Consensus 151 ~~~~~~~~~~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 229 (289)
+. +|++|+++++++|++|.+. .++. . |++.+ +.++|++|++.. +. .+... .|
T Consensus 364 a~----~g~~Lsell~~l~~~~~~~-~~~~-~--~~~~~--~~~~m~~l~~~~~~~-~~~~~----~g------------ 416 (481)
T 4hjh_A 364 HE----KKTPLSTIARSYGFRVALS-DRLQ-N--IPQEA--STAFLALLEDADKRA-SLFPA----GD------------ 416 (481)
T ss_dssp HH----HTCCHHHHHHTTCCCEEEE-EEEE-S--CCHHH--HHHHHHHTTSHHHHH-HHSCT----TS------------
T ss_pred HH----cCCCHHHHHHHHHHHhCCc-eeec-C--CCHHH--HHHHHHHHHhcCChH-HHHhh----cC------------
Confidence 87 7999999999999887543 3332 1 32433 468999997763 21 11100 00
Q ss_pred CCCCcccccCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 230 NESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 230 ~~~~~~~~~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
...+++++||+|+.| ++++|++||||||||++|+|+||++++.++++++.+.+
T Consensus 417 -~~~~v~~~DGlri~~-----~dg~wvlvRpSgTEP~lrvy~Ea~s~e~~~~l~~~~~~ 469 (481)
T 4hjh_A 417 -AIVRVETIDGVKLFF-----QSGNAVHYRASGNAPELRCYVESSDDTQAAKLQALGLE 469 (481)
T ss_dssp -CEEEEECSSSEEEEE-----TTSCEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHH
T ss_pred -ccccccCCCeEEEEe-----cCCcEEEEecCCCCceEEEEEEeCCHHHHHHHHHHHHH
Confidence 013567899999999 44569999999999999999999999999999987764
No 8
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=3.4e-48 Score=382.00 Aligned_cols=250 Identities=15% Similarity=0.162 Sum_probs=203.2
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHH-----hhCCCCeEEEc
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVL-----KEHPGTTIVTD 75 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l-----~~~~~~~vv~t 75 (289)
+||+++|||+ ++++..+.+.|++.+||+|+++||||||++++|++|++++++++++|++.+++ ++++...||.|
T Consensus 255 ~F~~~~P~P~-~~~~~~L~~~v~~~~aDlgia~DgDaDR~~ivd~~G~~v~~~~~lalla~~l~~~~~~~~~~~~~vv~t 333 (561)
T 3pmg_A 255 DFGGHHPDPN-LTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARS 333 (561)
T ss_dssp TGGGSCCCCS-TTTTHHHHHHHHTSCCSEEEEECTTSSCEEEEEGGGCBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEE
T ss_pred CCCCCCCCCC-hHHHHHHHHHHHhcCCCEEEEEcCCCCeEEEEeCCCcEECccHHHHHHHHHHHhhhhhHhcCCCeEEEE
Confidence 5999999998 56778899999999999999999999999999999999999999999999974 33333469999
Q ss_pred ccCCHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhc
Q 022948 76 ARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLE 155 (289)
Q Consensus 76 ~~ss~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~ 155 (289)
++||.+++++|+++|+++++|+||||||+++|.+.+ +.||||||||+ ++++.+++|||+++++++ +|++.
T Consensus 334 v~Ss~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~-----~~~gGEeS~G~-~~~~~~~kDGi~aal~~l-e~la~--- 403 (561)
T 3pmg_A 334 MPTSGALDRVANATKIALYETPTGWKFFGNLMDASK-----LSLCGEESFGT-GSDHIREKDGLWAVLAWL-SILAT--- 403 (561)
T ss_dssp TTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTC-----CSEEEETTTEE-EETTSSSCCHHHHHHHHH-HHHHH---
T ss_pred echHHHHHHHHHHcCCCEEEEeccHHHHHHHhccCC-----eEEEEEecCCc-CCCeeecCCHHHHHHHHH-HHHHH---
Confidence 999999999999999999999999999999998865 57999999996 689999999999999776 99987
Q ss_pred CCCCCHHHHHHHchhhh-ccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCC---------ccccccCcccccccc
Q 022948 156 GSDEGIGSLIKDLEEPL-ESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQG---------WELDSCGDCWVSEGC 225 (289)
Q Consensus 156 ~~~~~l~~ll~~lp~~~-~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 225 (289)
+|++|+++++++|+.| .+++.+.++.. |++.+ ++++|++|++......+.| .+|....+|.+..-.
T Consensus 404 -~g~~lsell~~l~~~yG~~~~~r~d~~~-~~~~~--~~~vm~~L~~~~~~~~~~g~~~~~~~~~~~v~~~~~f~~~dpv 479 (561)
T 3pmg_A 404 -RKQSVEDILKDHWHKFGRNFFTRYDYEE-VEAEG--ATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPV 479 (561)
T ss_dssp -HCSCHHHHHHHHHHHHCEEEEEEEEEEE-ECHHH--HHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTT
T ss_pred -hCCCHHHHHHHHHHHhCccccccccccc-CCHHH--HHHHHHHHHhcCCcccccccccccccccceeeecccccccCcc
Confidence 7999999999999888 34456666443 43544 5689999987653222222 222222233211100
Q ss_pred ccCCCCCCcccccCceEEEEeecccCCceEEEEecCCCC---ccEEEEEEeCCh
Q 022948 226 LVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHN---PNIAVNVQSMVP 276 (289)
Q Consensus 226 ~~~~~~~~~~~~~DGiki~~~~~~~~~~~w~liRpSgTE---P~iriy~Ea~~~ 276 (289)
+.+++++||+|+.| ++++|++||||||| |++|||+|+.+.
T Consensus 480 ------d~~v~~~dGvri~~-----~dgswvlvRpSGte~~~P~lRvY~Ea~~~ 522 (561)
T 3pmg_A 480 ------DGSVSKNQGLRLIF-----ADGSRIIFRLSGTGSAGATIRLYIDSYEK 522 (561)
T ss_dssp ------TCCEECCCCEEEEE-----TTSCEEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred ------cCccccCceEEEEe-----CCCCEEEEecCCCCCCCceEEEEEEecCC
Confidence 13578999999999 56689999999999 999999999654
No 9
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=3.1e-48 Score=372.74 Aligned_cols=228 Identities=19% Similarity=0.227 Sum_probs=190.5
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM 80 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~ 80 (289)
+||++.|+|+ +++.+++.|++.+||+|++|||||||++++|++|++++||++++|++.+++++++...||.|++||.
T Consensus 209 ~f~n~~~~~~---~~~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~~~~vv~tv~ss~ 285 (443)
T 3i3w_A 209 LNINVGCGAT---CVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICGGTNGIVGTQMTNM 285 (443)
T ss_dssp SCTTTTCSTT---CHHHHHHHHHHHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTTTCCSCEEEETTSCH
T ss_pred CCCCCCCCCC---CHHHHHHHHHhcCCcEEEEECCCCceEEEECCCCcEeChhHHHHHHHHHHHHhCCCCeEEEeecCch
Confidence 3676666665 4566788999999999999999999999999999999999999999999988766567999999999
Q ss_pred HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhcCCCCC
Q 022948 81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEG 160 (289)
Q Consensus 81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~~~~~~ 160 (289)
.++++++++|+++++|+|||+||+++|.+.+ +.||||+|||++|+++++++|||+++++++ ++++. ++++
T Consensus 286 ~l~~~~~~~G~~~~~t~~G~k~i~~~m~~~~-----~~~ggE~SG~~~~~~~~~~~Dgi~a~l~~l-e~l~~----~g~~ 355 (443)
T 3i3w_A 286 SYENHYRANKIPFIRSKVGDRYVLEDLVKYG-----YKIGGESSGHVINLNFGTTGDGLFTAIQLL-AIFSQ----ADKP 355 (443)
T ss_dssp HHHHHHHHTTCCEEEESSSTTHHHHHHHHHT-----CCEEECTTSBEEETTTCSSCCHHHHHHHHH-HHTTT----CSSC
T ss_pred HHHHHHHHCCCeEEEEeChHHHHHHHHhhcC-----cEEEEEeeCcEEEcCcCcCCCHHHHHHHHH-HHHHH----cCCC
Confidence 9999999999999999999999999999976 479999999999999999999999999776 88766 8999
Q ss_pred HHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccCc
Q 022948 161 IGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240 (289)
Q Consensus 161 l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~DG 240 (289)
|+++++++|.+ ++...+++|+...++. .+..+.+.+.+. . .
T Consensus 356 Lsel~~~~~~~-p~~~~~v~~~~~~~~~------~~~~~~~~i~~~---------------------------~--~--- 396 (443)
T 3i3w_A 356 VSEFKLQGELM-QQTLINVPLTKKVARE------DLQKVASDVNDV---------------------------E--K--- 396 (443)
T ss_dssp GGGTSCSSCCC-EEEEEEEECSSCCCHH------HHHTTHHHHHHH---------------------------H--H---
T ss_pred HHHHHHhhhhh-cceEEEEEcCcccchh------hHHHHHHHHHHH---------------------------H--H---
Confidence 99999999864 4556678776432221 122233222210 0 0
Q ss_pred eEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 241 YRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 241 iki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
.+ .++||+|||||||||++|||+||++++.++++++++.+
T Consensus 397 ---~~-----~~~gw~lvR~SgTEP~~rv~~Ea~~~~~~~~l~~~~~~ 436 (443)
T 3i3w_A 397 ---RL-----GNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVE 436 (443)
T ss_dssp ---HH-----GGGEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred ---hc-----CCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHH
Confidence 01 36899999999999999999999999999999998764
No 10
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=7.3e-48 Score=372.42 Aligned_cols=226 Identities=21% Similarity=0.300 Sum_probs=186.7
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhC--CCCeEEEcccC
Q 022948 1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDART 78 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~--~~~~vv~t~~s 78 (289)
+||++.|+|. +++.+++.|++.+||+|+++||||||++++|++|++++||++++|++.++++++ ++..||.|++|
T Consensus 231 ~f~n~~~~~~---~~~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~Lla~~l~~~~~l~~~~vv~tv~s 307 (469)
T 3pdk_A 231 MNINDGVGST---HPEVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMS 307 (469)
T ss_dssp SCTTSSCSTT---STHHHHHHHHHHTCSEEEEECTTSSBEEEEETTSCEECHHHHHHHHHHHHHHTTCSGGGEEEEETTS
T ss_pred CCCCCCCCCC---CHHHHHHHHHhcCCcEEEEECCCCCeEEEECCCCcEEChhHHHHHHHHHHHHhCCCCCCeEEEeecC
Confidence 3665555554 456678899999999999999999999999999999999999999999999875 34579999999
Q ss_pred CHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHHHHhcCCC
Q 022948 79 SMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSD 158 (289)
Q Consensus 79 s~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~~~~~~~~ 158 (289)
|..++++++++|+++++|+|||+||.++|.+.+ ++||||+|||++|+++.+++|||+++++++ ++++. +|
T Consensus 308 s~~l~~~~~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~SG~~~~~~~~~~~Dgi~aal~~l-e~l~~----~g 377 (469)
T 3pdk_A 308 NLGFYKALEANGITSDKTAVGDRYVMEEMKRGG-----YNLGGEQSGHIILLDYITTGDGMLSALQLV-NIMKM----TK 377 (469)
T ss_dssp CHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHT-----CCEEECTTSBEEETTTCSSCCHHHHHHHHH-HHHHH----HT
T ss_pred cHHHHHHHHHcCCEEEEEcCchHHHHHHHhhcC-----CeEEEcccCCEecCCCCCCCCHHHHHHHHH-HHHHH----cC
Confidence 999999999999999999999999999999976 479999999999999999999999999776 89887 79
Q ss_pred CCHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHH--HHHhhhhhcccCCccccccCccccccccccCCCCCCccc
Q 022948 159 EGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIE--EFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAI 236 (289)
Q Consensus 159 ~~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~--~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 236 (289)
++|+++++++|. |++...+++++ . +..+|+ .+.+.
T Consensus 378 ~~Lsel~~~l~~-~~~~~~~v~~~----~----k~~~~~~~~~~~~---------------------------------- 414 (469)
T 3pdk_A 378 KPLSELAGEMTK-FPQLLVNVRVT----D----KKLALENEKIKEI---------------------------------- 414 (469)
T ss_dssp CCHHHHHTTSCC-CCEEEEEECCS----C----HHHHTTCHHHHHH----------------------------------
T ss_pred CCHHHHHHHHhh-cCceEEEEecC----c----hhhhhccHHHHHH----------------------------------
Confidence 999999999986 44434444443 1 123332 12111
Q ss_pred ccCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 237 DARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 237 ~~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
+++++..+ .++||+|||||||||++|||+||++++.++++++.+.+
T Consensus 415 -i~~~~~~~-----~~~gw~lvRpSgTEP~lRv~~Ea~~~~~~~~l~~~~~~ 460 (469)
T 3pdk_A 415 -IRVVEEEM-----NGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVE 460 (469)
T ss_dssp -HHHHHHHC-----CSSCEEEEECCSSSCCEEEEEECSSHHHHHHHHHHHHH
T ss_pred -HHHHheEe-----CCCcEEEEEeCCCCCEEEEEEEECCHHHHHHHHHHHHH
Confidence 12222112 37899999999999999999999999999999988764
No 11
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-46 Score=369.14 Aligned_cols=246 Identities=17% Similarity=0.139 Sum_probs=185.0
Q ss_pred CCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhC--CCCeEEEcccCCHHHHH
Q 022948 7 PNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH--PGTTIVTDARTSMALTK 84 (289)
Q Consensus 7 P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~--~~~~vv~t~~ss~~l~~ 84 (289)
|||+.+.+++.+.. ++.+||+|+++||||||++++|++ ++++||++++|+++++++.+ ++..|+.|++||.++++
T Consensus 261 p~p~~~~~l~~~~~--~~~~aDlgia~DgDaDR~~vvd~~-~~l~gd~i~alla~~l~~~~~~~~~~vv~t~vss~~l~~ 337 (524)
T 2z0f_A 261 MDCSSPYAMAGLLA--LKDRFDLAIGNDPDADRHGIVTPR-GLMNPNHYLAAALHHLYTTRSWPGAKVGKTAVTSALLDR 337 (524)
T ss_dssp -----------CCC--CCCCSSEEEEECTTSCSEEEEETT-EECCHHHHHHHHHHHHHTTCCCTTCEEEEETTSCTHHHH
T ss_pred CCCCChhHHHHHHH--hhcCCCEEEEeCCccccceEEecC-ceechhHHHHHHHHHHHHhcCCCCCeEEEecccHHHHHH
Confidence 66665555443332 589999999999999999999999 89999999999999998876 45578999999999999
Q ss_pred HHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCC-----ccCCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948 85 FITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKEN-----YFLDDGAYMVVKIIIQMVRMKLEGSDE 159 (289)
Q Consensus 85 ~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~-----~~~~Dgi~a~l~ll~e~~~~~~~~~~~ 159 (289)
+++++|+++++|+||||||.++|++.+ ++||||+|||++|+++ .+++|||+++++++ ++++. +|+
T Consensus 338 ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~aal~~l-e~~a~----~g~ 407 (524)
T 2z0f_A 338 VAQALGREVYETPVGFKHFVAGLLEGW-----LGFAGEESAGASFLRFDGRPFSTDKDGILMGLLAA-ELMAK----RGQ 407 (524)
T ss_dssp HHHHTTCCEEEECSSTHHHHHHHHHSS-----EEEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHH-HHHHH----HSS
T ss_pred HHHHhCceEEEcCCcHHHHHHHHhhCC-----cEEEEEccCcEEECCCCcccccccchHHHHHHHHH-HHHHH----hCC
Confidence 999999999999999999999999765 6899999999999997 88999999999776 99988 799
Q ss_pred CHHHHHHHchhhhccc-eeEEEeccChhhHhhhHHHHHHHHHhhh-hhcccCCccccccCccccccccccCCCCCCcccc
Q 022948 160 GIGSLIKDLEEPLESI-ELRMNIISEPRYAKAKGSEAIEEFRKYI-EEGRLQGWELDSCGDCWVSEGCLVDSNESPAAID 237 (289)
Q Consensus 160 ~l~~ll~~lp~~~~~~-~~~i~~~~~~~~~~~~~~~~m~~l~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
||+++++++|+.|+++ +.++.++ |++.. ..+|+++++.. ....+.+.++..+-+.. ......
T Consensus 408 ~L~ell~~l~~~~g~~~~~~~~~~--~~~~~---k~~~~~l~~~~~~~~~~~~~~i~~~~~~~-----------~g~~~~ 471 (524)
T 2z0f_A 408 APDALYEALAEKLGRPYYARKDLP--VSPEA---KARLARLSAKEVHPSTLAGEPVLQVLDRA-----------TGNGEP 471 (524)
T ss_dssp CHHHHHHHHHHHHCCCEEEEEEEE--CCHHH---HHHHTTCCTTTSCCSEETTEECCEEEEEC-----------TTTCCE
T ss_pred CHHHHHHHHHHHhCcceeeeeccc--chHHH---HHHHHHHhhcCCChHHhCCceeEEEEecc-----------CCCCCC
Confidence 9999999999888653 3455544 32322 13555554320 00123333222111100 011345
Q ss_pred cCceEEEEeecccCCceEEEEecCCCCccEEEEEEe-CChhHHHHHHHHHh
Q 022948 238 ARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQS-MVPGGCRSITKSLR 287 (289)
Q Consensus 238 ~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea-~~~~~~~~l~~~~~ 287 (289)
+||+|+.| ++||++||||||||++|+|+|+ .+++.++++.+.+.
T Consensus 472 ~dGlr~~~------~~gwvlvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~ 516 (524)
T 2z0f_A 472 LGGIKVVA------ANAWFAVRPSGTEDVAKVYAESFLGEAHLERVLEEAT 516 (524)
T ss_dssp EEEEEEEC------SSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHH
T ss_pred CCeEEEEE------CCeEEEEEcCCCCCEEEEEEEEeCCHHHHHHHHHHHH
Confidence 89999999 6789999999999999999999 57778777776654
No 12
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=5e-46 Score=367.73 Aligned_cols=250 Identities=14% Similarity=0.075 Sum_probs=198.1
Q ss_pred CCCCCCCCCCChHHHHHHHHHH-------HhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhC-CCC-e
Q 022948 1 MFPNHIPNPEDKTAMALTRAAV-------LENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEH-PGT-T 71 (289)
Q Consensus 1 ~Fp~~~P~P~~~~~l~~l~~~v-------~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~-~~~-~ 71 (289)
+||+++|||+ ++++..+.+.| ++.+||+|+++||||||++++| +|++++++++++|++.+++..+ ++. .
T Consensus 269 ~Fp~~~p~P~-~~~~~~L~~~v~~~~~~a~~~~aDlgiA~DgDaDR~~vvd-~G~~v~~~~~l~ll~~~~l~~~~~g~~~ 346 (572)
T 1kfi_A 269 DFGGGHPDPN-LTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILG-RQFFVTPSDSLAVIAANANLIFKNGLLG 346 (572)
T ss_dssp TGGGSCCCCS-TTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEE-TTEEECHHHHHHHHHHTHHHHSTTCCCC
T ss_pred CCCCCCCCCC-chhHHHHHHHHhhhhccccccCCCeEEeeCCCCceeEEee-CCeEecccHhHHHHHHHHHHHhcCCCcE
Confidence 5999999998 57788999999 8999999999999999999999 8999999999999999998753 233 5
Q ss_pred EEEcccCCHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCccCCCHHHHHHHHHHHHHH
Q 022948 72 IVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVR 151 (289)
Q Consensus 72 vv~t~~ss~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~~~Dgi~a~l~ll~e~~~ 151 (289)
||.|++||.+++++|+++|+++++|+||||||.+.|.+.+ ++||||+|||+ ++++.+++|||+++++++ +|++
T Consensus 347 Vv~~~~ss~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~-~~~~~~~kDgi~a~l~~l-e~la 419 (572)
T 1kfi_A 347 AARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGL-----INLCGEESFGT-GSNHIREKDGIWAVLAWL-TILA 419 (572)
T ss_dssp EEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTS-----CSEEEETTTEE-EETTSSSCCHHHHHHHHH-HHHH
T ss_pred EEEEeCchHHHHHHHHHcCCeEEEeCCcHHHHHHHHhcCC-----cEEEEeccCCc-cccccCCCccHHHHHHHH-HHHH
Confidence 9999999999999999999999999999999999998765 58999999997 789999999999999776 9998
Q ss_pred HHhcCC---CCCHHHHHHHchhhhcc-ceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCC-ccccccCccccccccc
Q 022948 152 MKLEGS---DEGIGSLIKDLEEPLES-IELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQG-WELDSCGDCWVSEGCL 226 (289)
Q Consensus 152 ~~~~~~---~~~l~~ll~~lp~~~~~-~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~-~~v~~~~~~~~~~~~~ 226 (289)
.+ ..+ ++||+++++++++.|+. ...+..+.. |++.+ +.++|++|++..+. +.+ .+|..+.||.....
T Consensus 420 ~~-~~~g~~~~tL~ell~~l~~~yp~~~~~~~~~~~-~~~~~--~~~im~~l~~~~~~--~g~~~~v~~~~d~~~~~~-- 491 (572)
T 1kfi_A 420 HK-NKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQ-VDSAG--ANKMMEHLKTKFQY--FEQLKQGNKADIYDYVDP-- 491 (572)
T ss_dssp HH-TSSCSSCCCHHHHHHHHHHHHCEEEEEEEEEEE-ECHHH--HHHHHHHHHTTHHH--HHTTSTTCEEEECCEECT--
T ss_pred Hh-ccccCCCCCHHHHHHHHHHHcCceeEEeeeeec-CCHHH--HHHHHHHHHhhhhh--hCCceeEEEeecccccCc--
Confidence 82 222 22999999998777643 233443332 22333 56899999876542 111 34444444432100
Q ss_pred cCCCCCCcccccCceEEEEeecccCCceEEEEecCCCCc---cEEEEEEeCCh
Q 022948 227 VDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNP---NIAVNVQSMVP 276 (289)
Q Consensus 227 ~~~~~~~~~~~~DGiki~~~~~~~~~~~w~liRpSgTEP---~iriy~Ea~~~ 276 (289)
....+..+||+|+.| ++++|++|||||||| ++|||+|+.+.
T Consensus 492 ----~~~~i~~~dglr~~~-----~dg~wvlvRpSGTEP~~~~irvy~Ea~~~ 535 (572)
T 1kfi_A 492 ----VDQSVSKNQGVRFVF-----GDGSRIIFRLSGTGSVGATIRIYFEQFEQ 535 (572)
T ss_dssp ----TTCCEECCCCEEEEC-----TTSCEEEEEECSSCSSSEEEEEEEEEEES
T ss_pred ----ccCCCCCCCeEEEEE-----CCCeEEEEECCCCCCCCceEEEEEEecCc
Confidence 012567899999999 444699999999999 99999999643
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=6.1e-43 Score=343.76 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=178.9
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEE--cCCC--cccChhHHHHHHHHHHHhhCC---------
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVV--DNKG--NPINGDKLIALMSAIVLKEHP--------- 68 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vv--d~~G--~~l~~d~~~~Ll~~~~l~~~~--------- 68 (289)
||++.|+|+.++.+..+.+.+....+|+|+++||||||++++ |++| ++++||++++|++.++++..+
T Consensus 258 ~~n~~~~~~~~~~~~~~~~~~~~~~aDlGiA~DgDaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~ 337 (544)
T 2dka_A 258 LLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDGDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISL 337 (544)
T ss_dssp GTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEECTTSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCC
T ss_pred cCCCCCCccchhhhhhhhhhhhcccccEEEEECCCCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCccccc
Confidence 566666665443333333334456789999999999999999 9999 689999999999999988633
Q ss_pred CCeEEEcccCCHHHHHHHHH-cCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccc--eecCCCc------------
Q 022948 69 GTTIVTDARTSMALTKFITD-RGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGH--GALKENY------------ 133 (289)
Q Consensus 69 ~~~vv~t~~ss~~l~~~a~~-~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~--~~~~~~~------------ 133 (289)
...||.|++||..+.+.+++ +|+++++|+||+|||.++|.+.+ +.||||+||| ++|++++
T Consensus 338 ~~~vv~tv~sn~~~~~~i~~~~G~~v~~t~vG~k~v~~~m~~~~-----~~~ggE~sGhg~~if~~~~~~~~~~~~~~~~ 412 (544)
T 2dka_A 338 NIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVKHLHHEAENFD-----IGVYFEANGHGTVIFNPEAEKKIFDYKPNND 412 (544)
T ss_dssp CEEEEECTTSCHHHHHHHHHTSCCCEEECCSSHHHHHHHHTTSS-----EEEEECTTSCEEEEECHHHHHHHHHCCCSSH
T ss_pred CCcEEEEeccccHHHHHHHHHcCCceEEEeCcHHHHHHHHHhcC-----CcEEEcccCCeeEEECchhhhhhcccccCCh
Confidence 23699999989998888887 99999999999999999999876 6899999999 9999873
Q ss_pred ------------------cCCCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHchhhhccceeEEEeccChhhHhhhHHHH
Q 022948 134 ------------------FLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEA 195 (289)
Q Consensus 134 ------------------~~~Dgi~a~l~ll~e~~~~~~~~~~~~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~ 195 (289)
.++||++++++++ ++++. .|.++++++..+|. |++...+++|. +.. +..+
T Consensus 413 ~~kd~~~~~~~~~~l~a~~tgd~l~~~l~vl-~~~~~----~g~~lsel~~~~~~-~p~~~~~v~v~----~~~--~~~~ 480 (544)
T 2dka_A 413 NEAKAIKVLQNFSQLINQTVGDAISDLLAVL-IVVHY----LKLSPSDWDNEYTD-LPNKLVKVIVP----DRS--IFKT 480 (544)
T ss_dssp HHHHHHHHHHHHHHHSCSSSCCHHHHHHHHH-HHHHH----TTCCHHHHHTTSCC-CCEEEEEC-------------CCC
T ss_pred hHHHHHHHHHHHHHHhhcccCCCHHHHHHHH-HHHHH----hCCCHHHHHhhhhc-cCchhhccccc----hhh--hhhH
Confidence 5799999988776 88887 89999999999885 44445555554 211 0011
Q ss_pred HHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCC
Q 022948 196 IEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMV 275 (289)
Q Consensus 196 m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~ 275 (289)
|+..++ +. . .......+||+|+.| ++||++||||||||++|||+||.+
T Consensus 481 ~~~~~~-~~-----~--------------------~~~~~~~iDGv~~~~------~~gw~lvRpSGTEP~lRvy~Ea~~ 528 (544)
T 2dka_A 481 TNAERT-LV-----E--------------------PKGMQDEIDKLVAQY------PNGRSFVRASGTEDAVRVYAEADT 528 (544)
T ss_dssp CTTTC--CC--------------------------CTTHHHHHHHHHTTS------TTCEEEEEEC----CEEEEEECSS
T ss_pred HHhhhh-hc-----C--------------------chhhhcccceEEEEc------CCEEEEEEcCCCCCEEEEEEEeCC
Confidence 111000 00 0 012356899999998 689999999999999999999999
Q ss_pred hhHHHHHHHHHhc
Q 022948 276 PGGCRSITKSLRD 288 (289)
Q Consensus 276 ~~~~~~l~~~~~~ 288 (289)
++.++++++++.+
T Consensus 529 ~e~~~~l~~~~~~ 541 (544)
T 2dka_A 529 QNNVEELSKAVSE 541 (544)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=99.39 E-value=5.2e-14 Score=110.16 Aligned_cols=49 Identities=8% Similarity=-0.041 Sum_probs=44.5
Q ss_pred cccccCceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948 234 AAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD 288 (289)
Q Consensus 234 ~~~~~DGiki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~ 288 (289)
.++.+||+++.| ++||++||||||||+||||+|+.+.+.++++++.+.+
T Consensus 43 ~~~~idgl~~~~------~~gwvlvRpSGTEP~irvy~Ea~~~~~~~~~~~~~~~ 91 (112)
T 1wjw_A 43 LQEAINDLVKKY------TLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSL 91 (112)
T ss_dssp HHHHHHHHHHHS------SSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred hhhhhhcEEEEc------CCcEEEEEeCCCccEEEEEEEECCHHHHHHHHHHHHH
Confidence 466899999998 7799999999999999999999999999999888754
No 15
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=53.53 E-value=14 Score=29.29 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=38.4
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEE-----ecCCCCeEEEEcCCCcccCh
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVV-----FDTDVDRSGVVDNKGNPING 52 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia-----~D~DgDR~~vvd~~G~~l~~ 52 (289)
+|+..++=++-.++..-.-.+-..+||+.|+ .=|.|.=+.+.|++|+++++
T Consensus 69 i~Tn~aDlTRmPA~~K~LmAvD~~dADlvIARGRLGvPGSGSmLvimD~kGRiLta 124 (156)
T 3brc_A 69 FNTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSLLVIMDSRGRLLSA 124 (156)
T ss_dssp SCCGGGGGSSSHHHHHHHHHHHHHCCSEEEEEEECSSTTSCEEEEEEETTSCEEEE
T ss_pred ccCcchhcccCcHHHHHHHheeccCCcEEEEcccccCCCCccEEEEEcCCCcEEee
Confidence 5666555555455666666677899999998 45788888888999998876
No 16
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=42.12 E-value=31 Score=26.42 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=25.4
Q ss_pred eEEEE-ecCCCCccEEEEEEeCChhHHHHHHHHHh
Q 022948 254 GWIHL-RQSIHNPNIAVNVQSMVPGGCRSITKSLR 287 (289)
Q Consensus 254 ~w~li-RpSgTEP~iriy~Ea~~~~~~~~l~~~~~ 287 (289)
-.++| |.+.+|. =|.+.||.+.+.|.+|..+++
T Consensus 77 FKivV~k~~~~e~-KrYdfEA~s~~ea~EIV~~ik 110 (121)
T 3ulb_A 77 FKIFVRREGQDDI-KRYYFEAVSGQECTEIVTRLQ 110 (121)
T ss_dssp EEEEECCTTCSSC-EEEEEEESSHHHHHHHHHHHH
T ss_pred EEEEEEccCCCCc-ceeEEEeCCHHHHHHHHHHHH
Confidence 34555 4345665 799999999999999998875
No 17
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=32.05 E-value=38 Score=31.07 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=27.2
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|+++.|||. .+....+.+.+++.++|+.|++=
T Consensus 78 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 109 (407)
T 1vlj_A 78 VSGVKPNPV-LSKVHEAVEVAKKEKVEAVLGVG 109 (407)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ecCccCCCC-HHHHHHHHHHHHhcCCCEEEEeC
Confidence 788899998 68899999999999998777764
No 18
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=31.69 E-value=1e+02 Score=23.25 Aligned_cols=51 Identities=8% Similarity=0.163 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHhcCCcEEEEecCCCCeEEE--Ec-CCCc---ccChhHHHHHHHHH
Q 022948 12 KTAMALTRAAVLENNADLGVVFDTDVDRSGV--VD-NKGN---PINGDKLIALMSAI 62 (289)
Q Consensus 12 ~~~l~~l~~~v~~~~adlGia~D~DgDR~~v--vd-~~G~---~l~~d~~~~Ll~~~ 62 (289)
..+++.+-+.+...+.++-|.+|.+.+|+.+ +| +.|. .|.+++++.|.+..
T Consensus 41 ~~av~~lN~~~~~~n~~L~F~vdee~~~~vVkVvD~~TgEVIRqIPpEe~L~l~~~l 97 (117)
T 2hc5_A 41 AEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAM 97 (117)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCChHHHHHHHHHH
Confidence 4556677777777899999999999999776 46 4464 68899999988765
No 19
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=29.72 E-value=40 Score=30.90 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=27.4
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|++..|||. .+.+..+.+.+++.++|+.|++=
T Consensus 83 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 114 (408)
T 1oj7_A 83 FGGIEPNPA-YETLMNAVKLVREQKVTFLLAVG 114 (408)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eCCcCCCcC-HHHHHHHHHHHHHcCCCEEEEeC
Confidence 788899998 67888999999999998877764
No 20
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.43 E-value=50 Score=29.90 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=25.9
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEe
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVF 33 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~ 33 (289)
|++..|||. .+..+...+.+++.++|+.|++
T Consensus 65 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIav 95 (364)
T 3iv7_A 65 HDEVVMHVP-IEVAERARAVATDNEIDLLVCV 95 (364)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred EcceecCCC-HHHHHHHHHHHHhcCCCEEEEe
Confidence 778899998 6788899999999998876665
No 21
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=28.23 E-value=48 Score=30.01 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=26.6
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|++..|||. .+....+.+.+++.++|+.|++=
T Consensus 69 ~~~~~~~p~-~~~v~~~~~~~~~~~~d~IIavG 100 (387)
T 3bfj_A 69 FDGVEPNPK-DTNVRDGLAVFRREQCDIIVTVG 100 (387)
T ss_dssp ECCCCSSCB-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ECCccCCCC-HHHHHHHHHHHHhcCCCEEEEeC
Confidence 677889998 68899999999999998766653
No 22
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=26.01 E-value=47 Score=30.06 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.7
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|++..|||. .+....+.+.+++.++|+.|++=
T Consensus 65 ~~~~~~~p~-~~~v~~~~~~~~~~~~d~IIavG 96 (386)
T 1rrm_A 65 YDGVVPNPT-ITVVKEGLGVFQNSGADYLIAIG 96 (386)
T ss_dssp ECBCCSSCB-HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ECCccCCCC-HHHHHHHHHHHHhcCcCEEEEeC
Confidence 677889998 68899999999999998776653
No 23
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=25.62 E-value=1.6e+02 Score=26.60 Aligned_cols=76 Identities=17% Similarity=0.050 Sum_probs=47.6
Q ss_pred HHHHHHhcCCcEEEEecCCCCe---------EEEEcC---CCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCHHHHHH
Q 022948 18 TRAAVLENNADLGVVFDTDVDR---------SGVVDN---KGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKF 85 (289)
Q Consensus 18 l~~~v~~~~adlGia~D~DgDR---------~~vvd~---~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~~l~~~ 85 (289)
.+..+++.++|=++.+|++.+. +++|.. +|.++++.. ...+ .+=.+-..+-++
T Consensus 219 a~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl--------------~~~i-L~GITR~sVi~L 283 (372)
T 3dtg_A 219 AQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPEL--------------SGSL-LPGITRDSLLQL 283 (372)
T ss_dssp HHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCC--------------CSSS-CCCHHHHHHHHH
T ss_pred HHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCc--------------cccc-cccHHHHHHHHH
Confidence 3566788999999999987764 333321 233333320 0011 111223446689
Q ss_pred HHHcCCcEEEeecccHHHHHHHh
Q 022948 86 ITDRGGNHCLYRVGYRNVIDKGV 108 (289)
Q Consensus 86 a~~~g~~v~~t~vG~k~i~~~~~ 108 (289)
|+++|.+|.+.++....+.+...
T Consensus 284 A~~~Gi~V~Er~it~~El~~A~~ 306 (372)
T 3dtg_A 284 ATDAGFAVEERKIDVDEWQKKAG 306 (372)
T ss_dssp HHHHTCEEEECCCBHHHHHHHHH
T ss_pred HHHCCceEEEEeCCHHHHHHHhh
Confidence 99999999999999887776644
No 24
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=25.58 E-value=91 Score=24.64 Aligned_cols=35 Identities=23% Similarity=0.176 Sum_probs=21.3
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHhcCCcEEEEecCC
Q 022948 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTD 36 (289)
Q Consensus 2 Fp~~~P~P~~-~~~l~~l~~~v~~~~adlGia~D~D 36 (289)
|++..++|.+ |..-..+.+.|.+..+|.||.+.|-
T Consensus 32 ~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGT 67 (149)
T 3he8_A 32 FGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGT 67 (149)
T ss_dssp CCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCC
Confidence 4444445544 5556667777777777776665544
No 25
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=24.27 E-value=66 Score=28.87 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=26.2
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|++..|||. .+..+...+.+++.++|+.|++=
T Consensus 64 ~~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 95 (353)
T 3hl0_A 64 FSEAAMHTP-VEVTKTAVEAYRAAGADCVVSLG 95 (353)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ecCcCCCCc-HHHHHHHHHHHhccCCCEEEEeC
Confidence 677889997 67888889999999988776653
No 26
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=23.58 E-value=63 Score=29.09 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=26.1
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCcEEEEec
Q 022948 2 FPNHIPNPEDKTAMALTRAAVLENNADLGVVFD 34 (289)
Q Consensus 2 Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D 34 (289)
|++..|||. .+..+...+.+++.++|+.|++=
T Consensus 66 f~~v~~~p~-~~~v~~~~~~~~~~~~D~IIavG 97 (358)
T 3jzd_A 66 YAGAVMHVP-IESARDATARAREAGADCAVAVG 97 (358)
T ss_dssp ECCCCTTCB-HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ecCCcCCCC-HHHHHHHHHHhhccCCCEEEEeC
Confidence 677889997 67888888999999988776653
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=22.55 E-value=50 Score=28.59 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.3
Q ss_pred CcEEEEecCCCCeEEEEcCCCc
Q 022948 27 ADLGVVFDTDVDRSGVVDNKGN 48 (289)
Q Consensus 27 adlGia~D~DgDR~~vvd~~G~ 48 (289)
.-=|||+|++.+|+.+....|-
T Consensus 226 vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp CEEEEEEETTTTEEEEEETTCS
T ss_pred ceEEEEEcCCCCEEEEECCCCC
Confidence 3379999999999998877763
No 28
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=22.42 E-value=1.1e+02 Score=22.31 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCc-E--EEEecCCCCeEEEEcCCCcccC
Q 022948 14 AMALTRAAVLENNAD-L--GVVFDTDVDRSGVVDNKGNPIN 51 (289)
Q Consensus 14 ~l~~l~~~v~~~~ad-l--Gia~D~DgDR~~vvd~~G~~l~ 51 (289)
+++.+.+.+++.++. + .....+.|.|+.+.|++|+.+.
T Consensus 76 dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~ie 116 (128)
T 3g12_A 76 DLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIE 116 (128)
T ss_dssp CHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEE
T ss_pred CHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEE
Confidence 478888889999998 4 3445567888777799998653
No 29
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=21.97 E-value=3.9e+02 Score=23.43 Aligned_cols=40 Identities=10% Similarity=-0.022 Sum_probs=29.5
Q ss_pred CeEEEcccCCHHHHHHHHHcCCcEEEeecccHHHHHHHhh
Q 022948 70 TTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVH 109 (289)
Q Consensus 70 ~~vv~t~~ss~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~ 109 (289)
..|++|-.+|..-.+.++.+|.+|+.+...+..-.+.+.+
T Consensus 102 ~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~ 141 (346)
T 3l6b_A 102 AYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENVAKR 141 (346)
T ss_dssp EEEEEETTSCHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
Confidence 4688888888877788899999999988766544444433
No 30
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=21.56 E-value=1.2e+02 Score=24.52 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=21.3
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHhcCCcEEEEecCCC
Q 022948 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTDV 37 (289)
Q Consensus 2 Fp~~~P~P~~-~~~l~~l~~~v~~~~adlGia~D~Dg 37 (289)
|++..+++.+ |..-..+.+.|.+..+|+||.+.|-|
T Consensus 52 ~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 52 FGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp CCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 4444444444 55566677777777777666655443
No 31
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.38 E-value=2.4e+02 Score=23.71 Aligned_cols=52 Identities=17% Similarity=0.250 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCC-----CCeEEEEcCCCc--ccChhHHHHHHHHHHH
Q 022948 13 TAMALTRAAVLENNADLGVVFDTD-----VDRSGVVDNKGN--PINGDKLIALMSAIVL 64 (289)
Q Consensus 13 ~~l~~l~~~v~~~~adlGia~D~D-----gDR~~vvd~~G~--~l~~d~~~~Ll~~~~l 64 (289)
.-++..++...+.++|+.+++|-. -.++.+++.+|. ..+..++...+...+.
T Consensus 170 ~l~~~A~~kL~~k~~D~IvaN~v~~f~~~~n~v~li~~~~~~~~~sK~eiA~~I~~~i~ 228 (232)
T 2gk4_A 170 HLVDIARKSLIKNQADLIIANDLTQISADQHRAIFVEKNQLQTVQTKEEIAELLLEKIQ 228 (232)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEGGGBCSSCBCEEEECSSCEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccCcCceEEEEEECCCcccCCCHHHHHHHHHHHHH
Confidence 456777888888999999999854 455788887763 2345666666666654
No 32
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=21.37 E-value=66 Score=25.83 Aligned_cols=31 Identities=6% Similarity=0.106 Sum_probs=26.3
Q ss_pred CCCCeEEEEcCCCcccChhHHHHHHHHHHHh
Q 022948 35 TDVDRSGVVDNKGNPINGDKLIALMSAIVLK 65 (289)
Q Consensus 35 ~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~ 65 (289)
++++++++.|++|+.++-.++...+..+...
T Consensus 72 ~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~ 102 (163)
T 4fak_A 72 KPQSTVITLEIQGKMLSSEGLAQELNQRMTQ 102 (163)
T ss_dssp CTTSEEEEEEEEEEECCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc
Confidence 4678899999999999999999988887554
No 33
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=21.31 E-value=1.1e+02 Score=24.84 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=20.9
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHhcCCcEEEEecCC
Q 022948 2 FPNHIPNPED-KTAMALTRAAVLENNADLGVVFDTD 36 (289)
Q Consensus 2 Fp~~~P~P~~-~~~l~~l~~~v~~~~adlGia~D~D 36 (289)
|.+..+++.+ |..-..+.+.|.+..+|+||.+.|-
T Consensus 56 ~G~~s~~s~DYPd~a~~vA~~V~~g~~d~GIliCGT 91 (179)
T 3k7p_A 56 CGPKTAESVDYPDFASRVAEMVARKEVEFGVLAAGS 91 (179)
T ss_dssp CSCSSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEccC
Confidence 4444455544 5555666777777777666655543
No 34
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.33 E-value=60 Score=27.70 Aligned_cols=22 Identities=27% Similarity=0.306 Sum_probs=18.2
Q ss_pred CcEEEEecCCCCeEEEEcCCCc
Q 022948 27 ADLGVVFDTDVDRSGVVDNKGN 48 (289)
Q Consensus 27 adlGia~D~DgDR~~vvd~~G~ 48 (289)
.-=|||+|++++|+.+....|-
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCS
T ss_pred ceEEEEEcCCCCEEEEECCCCC
Confidence 4479999999999998877663
Done!