Query 022949
Match_columns 289
No_of_seqs 185 out of 1395
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 13:50:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ll3_A Gluconate kinase; xylul 100.0 6.8E-57 2.3E-61 436.2 22.4 246 7-289 1-246 (504)
2 4bc3_A Xylulose kinase; transf 100.0 2.4E-57 8.3E-62 442.5 19.4 279 8-289 8-289 (538)
3 3hz6_A Xylulokinase; xylulose, 100.0 6.1E-56 2.1E-60 430.2 21.1 245 9-289 4-250 (511)
4 3ifr_A Carbohydrate kinase, FG 100.0 4.3E-56 1.5E-60 431.0 19.4 248 6-289 3-252 (508)
5 2itm_A Xylulose kinase, xylulo 100.0 2.1E-52 7.2E-57 402.9 19.2 240 11-289 1-240 (484)
6 2p3r_A Glycerol kinase; glycer 100.0 1.5E-52 5E-57 406.4 18.1 242 8-289 1-251 (510)
7 3h3n_X Glycerol kinase; ATP-bi 100.0 2.4E-52 8.3E-57 404.5 19.4 242 8-289 3-253 (506)
8 3g25_A Glycerol kinase; IDP007 100.0 5.3E-52 1.8E-56 401.7 19.7 242 8-289 4-254 (501)
9 3i8b_A Xylulose kinase; strain 100.0 1.5E-52 5E-57 406.6 14.9 240 8-289 3-281 (515)
10 4e1j_A Glycerol kinase; struct 100.0 7.7E-52 2.6E-56 402.2 19.6 245 5-289 21-273 (520)
11 3h6e_A Carbohydrate kinase, FG 100.0 4.5E-52 1.5E-56 399.9 17.1 233 9-289 5-240 (482)
12 3jvp_A Ribulokinase; PSI-II, N 100.0 3.2E-52 1.1E-56 409.1 15.8 255 9-289 4-281 (572)
13 3ezw_A Glycerol kinase; glycer 100.0 1.3E-51 4.6E-56 401.1 17.0 243 8-289 2-252 (526)
14 2zf5_O Glycerol kinase; hypert 100.0 1.1E-50 3.7E-55 392.2 19.7 239 9-289 2-246 (497)
15 3l0q_A Xylulose kinase; xlylul 100.0 8.2E-51 2.8E-55 397.8 15.4 249 8-289 3-264 (554)
16 2dpn_A Glycerol kinase; thermu 100.0 2.6E-50 8.7E-55 389.4 17.7 239 10-289 2-249 (495)
17 2d4w_A Glycerol kinase; alpha 100.0 7.3E-50 2.5E-54 387.0 16.1 239 10-289 2-252 (504)
18 2w40_A Glycerol kinase, putati 100.0 2.1E-49 7E-54 383.8 19.1 240 10-289 4-255 (503)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 1.9E-49 6.5E-54 382.7 13.3 239 7-289 1-244 (489)
20 2qm1_A Glucokinase; alpha-beta 99.0 5.4E-10 1.8E-14 101.2 7.8 120 8-153 4-129 (326)
21 1z6r_A MLC protein; transcript 98.9 2E-09 6.8E-14 100.7 8.8 118 8-152 83-206 (406)
22 2yhw_A Bifunctional UDP-N-acet 98.9 9.6E-10 3.3E-14 100.6 6.1 123 2-152 22-151 (343)
23 3r8e_A Hypothetical sugar kina 98.8 4.4E-09 1.5E-13 95.4 7.4 120 6-153 15-139 (321)
24 3vgl_A Glucokinase; ROK family 98.8 3.3E-09 1.1E-13 96.3 6.1 113 10-153 2-117 (321)
25 1z05_A Transcriptional regulat 98.8 6.3E-09 2.2E-13 98.1 7.9 118 8-152 106-228 (429)
26 4db3_A Glcnac kinase, N-acetyl 98.8 5.2E-09 1.8E-13 95.3 6.7 121 3-152 17-140 (327)
27 2hoe_A N-acetylglucosamine kin 98.8 4.3E-09 1.5E-13 97.7 6.1 119 9-153 86-209 (380)
28 2ch5_A NAGK protein; transfera 98.7 4.9E-09 1.7E-13 95.7 2.3 108 9-148 5-117 (347)
29 3htv_A D-allose kinase, alloki 98.6 2.5E-08 8.5E-13 90.2 5.9 115 9-151 6-126 (310)
30 2e2o_A Hexokinase; acetate and 98.6 1.3E-08 4.5E-13 91.1 3.8 103 11-151 3-105 (299)
31 3epq_A Putative fructokinase; 98.6 4.8E-08 1.6E-12 88.0 7.4 109 9-153 2-118 (302)
32 4htl_A Beta-glucoside kinase; 98.6 5.5E-08 1.9E-12 87.2 5.9 112 9-153 3-118 (297)
33 1woq_A Inorganic polyphosphate 98.5 8.1E-08 2.8E-12 84.7 5.6 119 8-153 10-135 (267)
34 2ap1_A Putative regulator prot 98.5 1.1E-07 3.7E-12 86.2 6.2 120 4-152 18-140 (327)
35 3vov_A Glucokinase, hexokinase 98.5 5E-08 1.7E-12 87.8 3.5 114 11-153 2-119 (302)
36 3mcp_A Glucokinase; structural 98.4 1.3E-07 4.6E-12 87.4 4.6 118 7-153 6-129 (366)
37 2gup_A ROK family protein; sug 98.4 6.4E-07 2.2E-11 79.7 7.8 107 9-151 3-113 (292)
38 1hux_A Activator of (R)-2-hydr 98.3 1E-06 3.4E-11 78.1 7.2 69 10-104 3-72 (270)
39 1zbs_A Hypothetical protein PG 98.3 1.8E-07 6.2E-12 83.5 1.8 104 11-149 1-105 (291)
40 2aa4_A Mannac kinase, putative 98.3 5.7E-07 1.9E-11 79.9 4.7 111 11-152 2-116 (289)
41 1zxo_A Conserved hypothetical 98.2 1.6E-07 5.6E-12 83.8 -0.3 103 11-150 1-104 (291)
42 1zc6_A Probable N-acetylglucos 98.2 4.3E-06 1.5E-10 75.0 8.2 103 10-149 11-118 (305)
43 1sz2_A Glucokinase, glucose ki 98.1 1.8E-06 6.1E-11 78.5 5.2 109 8-151 12-121 (332)
44 2yhx_A Hexokinase B; transfera 98.1 3.2E-06 1.1E-10 80.3 5.7 121 9-152 60-199 (457)
45 2q2r_A Glucokinase 1, putative 98.1 3E-06 1E-10 78.2 5.4 112 9-149 28-145 (373)
46 3lm2_A Putative kinase; struct 97.9 5E-06 1.7E-10 71.7 2.6 102 8-150 4-109 (226)
47 1cza_N Hexokinase type I; stru 97.5 4.7E-05 1.6E-09 78.2 4.3 123 9-152 77-220 (917)
48 4ehu_A Activator of 2-hydroxyi 97.5 0.00029 1E-08 61.8 8.2 30 10-39 1-30 (276)
49 1saz_A Probable butyrate kinas 97.4 2.3E-05 7.7E-10 72.7 0.4 32 10-42 2-33 (381)
50 1bdg_A Hexokinase; phosphotran 97.2 0.00023 7.9E-09 67.4 4.9 120 9-152 67-208 (451)
51 3h1q_A Ethanolamine utilizatio 97.0 0.0023 7.8E-08 55.7 9.0 34 8-41 26-59 (272)
52 3djc_A Type III pantothenate k 96.5 0.0034 1.2E-07 55.2 5.8 65 11-100 3-67 (266)
53 3bex_A Type III pantothenate k 96.4 0.0029 9.9E-08 55.1 4.9 64 9-99 2-65 (249)
54 1cza_N Hexokinase type I; stru 95.7 0.0092 3.1E-07 61.2 5.5 125 8-152 524-668 (917)
55 3o8m_A Hexokinase; rnaseh-like 95.7 0.013 4.4E-07 55.8 6.1 58 10-84 80-139 (485)
56 4a2a_A Cell division protein F 95.5 0.028 9.6E-07 52.5 7.6 76 8-99 6-86 (419)
57 3zyy_X Iron-sulfur cluster bin 95.5 0.024 8.1E-07 55.5 7.0 36 8-43 204-240 (631)
58 2h3g_X Biosynthetic protein; p 95.3 0.017 5.8E-07 50.7 5.0 63 12-98 2-64 (268)
59 2ych_A Competence protein PILM 95.0 0.035 1.2E-06 50.4 6.2 73 8-98 11-85 (377)
60 3hm8_A Hexokinase-3; glucose, 93.6 0.12 4E-06 48.6 6.5 72 10-98 59-133 (445)
61 3t69_A Putative 2-dehydro-3-de 93.5 0.075 2.6E-06 47.9 5.0 33 8-40 5-37 (330)
62 3f9m_A Glucokinase; hexokinase 93.5 0.13 4.3E-06 48.7 6.7 64 5-84 69-140 (470)
63 3nuw_A 2-OXO-3-deoxygalactonat 92.1 0.13 4.3E-06 45.7 4.3 33 8-41 4-36 (295)
64 3cet_A Conserved archaeal prot 91.5 0.14 4.8E-06 46.1 3.9 31 11-42 1-31 (334)
65 2ews_A Pantothenate kinase; PA 91.3 0.17 5.7E-06 44.8 4.2 27 9-36 19-45 (287)
66 4gni_A Putative heat shock pro 88.2 0.22 7.5E-06 45.7 2.6 22 9-31 12-33 (409)
67 3sk3_A Acetate kinase, acetoki 87.0 0.84 2.9E-05 42.3 5.7 36 5-40 14-50 (415)
68 3qfu_A 78 kDa glucose-regulate 85.7 0.44 1.5E-05 43.2 3.1 22 10-32 18-39 (394)
69 2f9w_A Pantothenate kinase; CO 85.0 0.94 3.2E-05 39.6 4.7 31 9-39 22-52 (271)
70 2ivn_A O-sialoglycoprotein end 84.9 1.9 6.5E-05 38.5 6.9 30 11-41 2-31 (330)
71 3mdq_A Exopolyphosphatase; str 84.8 2 6.7E-05 38.2 6.8 22 9-30 3-24 (315)
72 3cer_A Possible exopolyphospha 83.1 1.3 4.5E-05 39.9 5.0 23 8-30 14-36 (343)
73 3r9p_A ACKA; ssgcid, seattle s 82.6 4.8 0.00016 36.9 8.5 67 11-96 13-83 (391)
74 4ijn_A Acetate kinase, acetoki 81.2 6.7 0.00023 36.0 8.9 30 10-39 23-53 (398)
75 3bzc_A TEX; helix-turn-helix, 81.0 3.3 0.00011 41.5 7.4 31 9-39 328-359 (785)
76 1t6c_A Exopolyphosphatase; alp 80.3 2.5 8.6E-05 37.6 5.7 20 11-30 13-32 (315)
77 1yuw_A Heat shock cognate 71 k 80.1 1 3.5E-05 43.3 3.3 22 8-29 2-23 (554)
78 3i33_A Heat shock-related 70 k 80.1 0.8 2.7E-05 41.7 2.5 21 8-28 21-41 (404)
79 1vhx_A Putative holliday junct 80.0 1.5 5E-05 34.7 3.7 26 10-35 3-28 (150)
80 2zgy_A Plasmid segregation pro 79.4 1.4 4.7E-05 39.0 3.7 24 11-34 1-24 (320)
81 3en9_A Glycoprotease, O-sialog 78.2 4.6 0.00016 38.5 7.2 33 8-40 4-36 (540)
82 3psf_A Transcription elongatio 77.9 5 0.00017 41.5 7.7 31 9-39 518-553 (1030)
83 1u6z_A Exopolyphosphatase; alp 76.6 4.1 0.00014 38.7 6.3 23 8-30 9-31 (513)
84 1dkg_D Molecular chaperone DNA 73.9 1.3 4.3E-05 40.1 1.9 19 11-29 3-21 (383)
85 4gib_A Beta-phosphoglucomutase 73.5 0.84 2.9E-05 38.4 0.6 23 13-35 9-39 (250)
86 3eno_A Putative O-sialoglycopr 72.1 5.6 0.00019 35.5 5.8 33 7-40 3-35 (334)
87 3psi_A Transcription elongatio 70.7 9.4 0.00032 40.2 7.7 31 9-39 515-550 (1219)
88 4b9q_A Chaperone protein DNAK; 70.6 2.4 8.2E-05 41.2 3.1 18 11-28 3-20 (605)
89 3hi0_A Putative exopolyphospha 70.1 8.5 0.00029 36.5 6.8 33 7-39 12-47 (508)
90 3aap_A Ectonucleoside triphosp 67.6 3.5 0.00012 37.3 3.3 21 9-29 2-22 (353)
91 3cj1_A Ectonucleoside triphosp 67.4 3 0.0001 39.1 3.0 21 9-29 33-53 (456)
92 2v7y_A Chaperone protein DNAK; 66.5 3.2 0.00011 39.3 3.0 19 11-29 3-21 (509)
93 3cqy_A Anhydro-N-acetylmuramic 66.5 15 0.00051 33.4 7.3 36 7-42 2-42 (370)
94 3d2f_A Heat shock protein homo 66.1 2.7 9.2E-05 41.5 2.4 18 12-29 4-21 (675)
95 1jce_A ROD shape-determining p 65.4 3.1 0.00011 36.9 2.5 17 11-27 4-20 (344)
96 2a6a_A Hypothetical protein TM 64.3 17 0.0006 30.3 6.9 63 10-98 12-74 (218)
97 3zx3_A Ectonucleoside triphosp 64.1 5.4 0.00019 37.3 4.0 22 8-29 32-53 (452)
98 1iv0_A Hypothetical protein; r 63.6 5.2 0.00018 29.1 3.0 22 12-33 3-24 (98)
99 2kho_A Heat shock protein 70; 62.6 3.5 0.00012 40.0 2.5 18 11-28 3-20 (605)
100 4h0p_A Acetate kinase; askha ( 61.7 9.3 0.00032 35.5 5.0 32 9-40 5-37 (438)
101 2e1z_A Propionate kinase; TDCD 61.4 11 0.00039 34.7 5.5 33 9-41 17-50 (415)
102 1nu0_A Hypothetical protein YQ 61.3 8.7 0.0003 29.8 4.1 24 10-33 3-26 (138)
103 4ep4_A Crossover junction endo 60.6 27 0.00092 27.9 7.1 22 11-32 2-23 (166)
104 1nbw_A Glycerol dehydratase re 60.2 7.7 0.00026 37.3 4.2 33 10-42 2-37 (607)
105 3r6m_A YEAZ, resuscitation pro 55.8 38 0.0013 28.1 7.5 27 10-37 2-28 (213)
106 3khy_A Propionate kinase; csgi 55.2 15 0.00053 33.4 5.2 30 11-40 3-33 (384)
107 1g99_A Acetate kinase; alpha/b 53.5 14 0.00048 34.0 4.7 31 11-41 2-33 (408)
108 2fsj_A Hypothetical protein TA 52.7 7 0.00024 34.9 2.5 23 10-34 21-43 (346)
109 1hjr_A Holliday junction resol 51.6 18 0.0006 28.7 4.5 23 11-33 2-24 (158)
110 2iir_A Acetate kinase; transfe 50.4 14 0.00048 33.9 4.2 31 11-41 2-33 (403)
111 2gel_A Putative GRAM negative 49.1 34 0.0012 28.6 6.2 24 11-35 2-25 (231)
112 4apw_A ALP12; actin-like prote 47.7 9.9 0.00034 33.6 2.7 21 7-27 4-24 (329)
113 4h0o_A Acetate kinase; askha ( 46.0 22 0.00074 32.7 4.7 30 9-39 13-42 (404)
114 1k8k_A ARP3, actin-like protei 41.4 11 0.00037 34.3 2.0 23 9-31 4-26 (418)
115 1eik_A RNA polymerase subunit 40.5 38 0.0013 23.4 4.2 35 233-276 23-57 (77)
116 2d0o_A DIOL dehydratase-reacti 40.5 1.2E+02 0.0042 29.1 9.0 28 10-37 2-31 (610)
117 1hmj_A RPB5, protein (subunit 37.2 37 0.0013 23.6 3.7 36 232-276 20-55 (78)
118 3qbx_A Anhydro-N-acetylmuramic 36.5 23 0.0008 32.1 3.3 33 10-42 2-38 (371)
119 1dw0_A Cytochrome C; asparagin 36.1 9.7 0.00033 28.5 0.6 33 175-207 78-111 (112)
120 2fxu_A Alpha-actin-1, actin, a 34.2 16 0.00054 32.8 1.8 22 10-31 5-26 (375)
121 4ayb_H DNA-directed RNA polyme 29.9 70 0.0024 22.4 4.2 35 233-276 29-63 (84)
122 3mdq_A Exopolyphosphatase; str 29.0 71 0.0024 27.9 5.2 32 10-42 131-162 (315)
123 1xho_A Chorismate mutase; sout 25.9 74 0.0025 24.8 4.0 31 69-99 47-79 (148)
124 3js6_A Uncharacterized PARM pr 25.0 38 0.0013 30.2 2.7 18 7-24 1-18 (355)
125 1dbf_A Protein (chorismate mut 24.0 85 0.0029 23.8 4.0 31 69-99 18-50 (127)
126 1ufy_A Chorismate mutase; shik 22.9 1.1E+02 0.0037 23.0 4.4 31 69-99 17-50 (122)
127 2nrh_A Transcriptional activat 21.9 29 0.001 28.9 1.2 19 12-33 3-21 (219)
128 3hn9_A Lamin-B1; structural ge 21.0 1.1E+02 0.0037 23.0 4.1 22 21-42 99-120 (123)
129 1t6c_A Exopolyphosphatase; alp 20.3 1E+02 0.0034 27.0 4.4 32 10-42 138-169 (315)
No 1
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=6.8e-57 Score=436.21 Aligned_cols=246 Identities=19% Similarity=0.247 Sum_probs=231.1
Q ss_pred CCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcC
Q 022949 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (289)
|+.+|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+..
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKV---GQAEEDPK----------LIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCC---CcEEECHH----------HHHHHHHHHHHHHHHhC
Confidence 345799999999999999999999999999999999888876 57888888 99999999999887642
Q ss_pred CCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHC
Q 022949 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (289)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG 166 (289)
. .+|.+|||++|++++|+||++|+| ++|+|+|+|.|+.++++++++.. +.++++++||
T Consensus 68 ~-~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~tG 125 (504)
T 3ll3_A 68 D-GKIAAISWSSQMHSLIGLGSDDEL--------------------LTNSITWADNCAKSIVQDAKNRG-FAQQIYRKTG 125 (504)
T ss_dssp S-SEEEEEEEEECSSCBEEECTTSCB--------------------SSCEECTTCCTTHHHHHHHHHHT-HHHHHHHHHC
T ss_pred C-CCeEEEEEECCCCcEEEECCCCCC--------------------cccceeCCccCHHHHHHHHHhcc-CHHHHHHHHC
Confidence 2 689999999999999999999998 58999999999999999999885 4688999999
Q ss_pred CCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCChhhh
Q 022949 167 SRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (289)
Q Consensus 167 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~~~~~ 246 (289)
+++++.++++||+|+++|+||+|+++++|++++|||.|+|||+.. +|+|+||+|+|||+++++|++++|+.+|++ .++
T Consensus 126 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 203 (504)
T 3ll3_A 126 MPMHPMAPIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLV-TDTTMAAGTGILNLKTLTWDQELLDILKIK-KEQ 203 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHCHHHHHHCCEEECHHHHHHHHHHSCCE-EEHHHHTTTTCBCTTTSSBCHHHHHHHTCC-GGG
T ss_pred CCCCcccHHHHHHHHHHcChHHHHHHhheeCHHHHHHHHHhCCcc-cchhHhhcccCeeCCCCCcCHHHHHHcCCC-HHH
Confidence 999999999999999999999999999999999999999999987 999999999999999999999999999998 899
Q ss_pred cCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 247 LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
||+|+++++++|++++++|+++||++|+||++|++|++||++|
T Consensus 204 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g 246 (504)
T 3ll3_A 204 LPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIG 246 (504)
T ss_dssp SCEEECTTCEECCCCHHHHHHHTCCTTCEEEEEEEHHHHHHHT
T ss_pred CCCeeCCcceeeccCHHHHHhcCCCcCCCEEEEccHHHHHHHh
Confidence 9999999999999999999999999999999999999999876
No 2
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=2.4e-57 Score=442.52 Aligned_cols=279 Identities=51% Similarity=0.870 Sum_probs=246.5
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCC-CCceeeCCCCCCCcCCChh-HHHHHHHHHHHHHHhc
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKT-KDGVYRDPSNNGRIVSPTL-MWIEALDLMLQKLSKS 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~-~g~~e~d~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 85 (289)
..+|+||||+|||++|++|||.+|+++++.+++|+..+|++++ +||+++++ ++.||+++ .||+++..+++.+.+.
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~---g~~eqdp~~~w~~~~~~~~~~l~~~ 84 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKD---GLTVTSPVLMWVQALDIILEKMKAS 84 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTT---SSCEEEEHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCC---CccccCcHHHHHHHHHHHHHHHHHc
Confidence 3579999999999999999999999999999999877776322 25666542 46777775 6888888888888664
Q ss_pred -CCCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 -LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 -~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
.+..+|.+||||+|++++|+||++|+..++++|+++||++.|...+.++|+|+|+|.|+.++++++++.+++.++++++
T Consensus 85 ~~~~~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~ 164 (538)
T 4bc3_A 85 GFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCL 164 (538)
T ss_dssp TCCGGGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHH
T ss_pred CCChHHeEEEEecccceeEEEECCCccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCcHHHHHHH
Confidence 5677899999999999999999999855566777777666555444479999999999999999999987656889999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCChh
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLE 244 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~~~ 244 (289)
||+++++.|+++||+|+++|+||+|+++++|++++|||.|+|||+.+.+|+|+||+|+|||+++++|++++|+.+|+++.
T Consensus 165 tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~ 244 (538)
T 4bc3_A 165 TGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLE 244 (538)
T ss_dssp HSSCCCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHHHTTSSCEETTTTEECHHHHHHHCTTHH
T ss_pred HCCCCccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccchhhcccccccccCCCCHHHHHHhCccHH
Confidence 99999999999999999999999999999999999999999999875589999999999999999999999999998535
Q ss_pred hhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 245 EKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 245 ~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
++||+|+++++++|+|++++|+++||++||||++|++|++|+++|
T Consensus 245 ~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g 289 (538)
T 4bc3_A 245 EKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAG 289 (538)
T ss_dssp HHHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHH
T ss_pred HHCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhc
Confidence 899999999999999999999999999999999999999999875
No 3
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=6.1e-56 Score=430.19 Aligned_cols=245 Identities=17% Similarity=0.199 Sum_probs=230.8
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc-CC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-LD 87 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 87 (289)
.+|+||||+|||++|++|+|.+|+++++.+++++..+|++ ||+||||+ +||+++.++++++.+. .+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~~~~~i~~~~~~~~~ 70 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGN---GPVEQDAG----------DWYDAVQRIASSWWQSGVD 70 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTS---SCCEECHH----------HHHHHHHHHHHHHHTTTCC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCC---CCEEECHH----------HHHHHHHHHHHHHHhcCCC
Confidence 4699999999999999999999999999999999888876 57888888 9999999999987633 45
Q ss_pred CCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHCC
Q 022949 88 LSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGS 167 (289)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG~ 167 (289)
..+|.+|||++|++++|+||++|+| ++|+|+|+|.|+.++++++++.+ +.++++++||+
T Consensus 71 ~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~tG~ 129 (511)
T 3hz6_A 71 ARRVSAIVLSGQMQNFLPLDQDHEP--------------------LHRAVLYSDKRPLKEAEEINARH-GADNLWSALEN 129 (511)
T ss_dssp GGGEEEEEEEECCSCBEEECTTSCB--------------------SSCEECTTCCCCHHHHHHHHHHH-CHHHHHHHHSS
T ss_pred hhHeEEEEEecccccEEEECCCcCC--------------------CcCceecCCCCHHHHHHHHHhcc-CHHHHHHHHCC
Confidence 6789999999999999999999998 58999999999999999999987 46889999999
Q ss_pred CCCCCChHHHHHHHHhcCcchHhhcccccc-cchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCChhhh
Q 022949 168 RGYERFTGPQIRKLFQTQPGVYDDTERISV-VSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEK 246 (289)
Q Consensus 168 ~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~-~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~~~~~ 246 (289)
++++.++++||+|+++|+||+|+++++|++ ++|||.|+|||+.. +|+|+||+|+|||+++++|++++|+.+|++ .++
T Consensus 130 ~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~ 207 (511)
T 3hz6_A 130 PMTAASILPKLVFWRASFPQAFGRLRHVVLGAKDYVVLRLTGRHA-TDRTNASTTGLYRPKDDAWHVELLADYGFS-LDL 207 (511)
T ss_dssp CCSTTSHHHHHHHHHHHCHHHHTTCCEEECSHHHHHHHHHHSCCE-ECHHHHHHTTCEETTTTEECHHHHHHTTCC-GGG
T ss_pred CCCchhHHHHHHHHHHhChHHHHHHHHHhcCcHHHHHHHHhCCce-eeHhHhhcccceeCCCCCcCHHHHHHhCCC-HHH
Confidence 999999999999999999999999999999 99999999999987 999999999999999999999999999998 899
Q ss_pred cCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 247 LGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 247 LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
||+|+++++++|++++++|+++||++|+||++|++|++||++|
T Consensus 208 LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g 250 (511)
T 3hz6_A 208 MPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLG 250 (511)
T ss_dssp SCEECCTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHH
T ss_pred CCCCcCCCCcccccCHHHHHhhCCCCCCeEEEECchHHHHHHh
Confidence 9999999999999999999999999999999999999999875
No 4
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=4.3e-56 Score=431.00 Aligned_cols=248 Identities=16% Similarity=0.175 Sum_probs=230.4
Q ss_pred CCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 6 ~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
.++.+|+||||+|||++|++|+|.+|+++++.+++++..+|++ ||+||||+ +||+.+.++++++.+.
T Consensus 3 ~~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~i~~~i~~~~~~ 69 (508)
T 3ifr_A 3 LAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHP---GWAEEDPA----------QWWDNARAVLAELKTT 69 (508)
T ss_dssp ----CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCC---CceEECHH----------HHHHHHHHHHHHHHHh
Confidence 4556899999999999999999999999999999999888876 57888888 9999999999987643
Q ss_pred --CCCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHH
Q 022949 86 --LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSK 163 (289)
Q Consensus 86 --~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~ 163 (289)
.+..+|.+|||++|++++|+||++|+| ++|+|+|+|.|+.++++++++.+ +.+++++
T Consensus 70 ~~~~~~~I~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~ 128 (508)
T 3ifr_A 70 AGESDWRPGGICVTGMLPAVVLLDDRGAV--------------------LRPSIQQSDGRCGDEVAELRAEV-DSEAFLA 128 (508)
T ss_dssp HCGGGCCEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCCCHHHHHHHHHHS-CHHHHHH
T ss_pred cCCChhheEEEEEECCCCcEEEECCCCCC--------------------cccceeccccChHHHHHHHHhhc-cHHHHHH
Confidence 456789999999999999999999997 48999999999999999999986 4678999
Q ss_pred HHCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCCh
Q 022949 164 LTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSL 243 (289)
Q Consensus 164 ~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~~ 243 (289)
+||+++++.++++||+|+++|+||+|++++++++++|||.|+|||+.. +|+|+|++|++||+++++|++++|+.+|++
T Consensus 129 ~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~- 206 (508)
T 3ifr_A 129 RTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERV-VDRNWALEGGFIDLASGTVEADLVALAHIP- 206 (508)
T ss_dssp HHSSCSSTTSHHHHHHHHHHHCHHHHHTCSEEECHHHHHHHHHHCCCC-EEHHHHHHHTCEETTTTEECHHHHHTTTSC-
T ss_pred HHCCCCChhhHHHHHHHHHHcCHHHHHHHhhhcCchHHHHHHhcCCcc-ccHhHhhcccCccCccCCCCHHHHHHcCCC-
Confidence 999999999999999999999999999999999999999999999987 999999999999999999999999999998
Q ss_pred hhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 244 EEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 244 ~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
.++||+|+++++++|++++++|+++||++|+||++|++|++||++|
T Consensus 207 ~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g 252 (508)
T 3ifr_A 207 PSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALA 252 (508)
T ss_dssp GGGSCCEECTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHH
T ss_pred HHHCCCCcCCCCeeeccCHHHHHHhCCCCCCeEEEECchHHHHHHh
Confidence 8999999999999999999999999999999999999999999875
No 5
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=2.1e-52 Score=402.92 Aligned_cols=240 Identities=23% Similarity=0.439 Sum_probs=223.2
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
|+||||+|||++|++|+|.+|++++..+.+++..+|++ ||+||||+ +||+.+.++++++.+.....+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~~ 67 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHP---LWSEQDPE----------QWWQATDRAMKALGDQHSLQD 67 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHSCCTT
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCC---CCEeECHH----------HHHHHHHHHHHHHHHhCCccc
Confidence 47999999999999999999999999999998887876 57888888 999999999998765423467
Q ss_pred EeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHCCCCC
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGY 170 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG~~~~ 170 (289)
|.+|||++|++++++||++|+| ++|+|+|+|.|+.++++++++..+ .++++||.+++
T Consensus 68 i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~tG~~~~ 124 (484)
T 2itm_A 68 VKALGIAGQMHGATLLDAQQRV--------------------LRPAILWNDGRCAQECTLLEARVP---QSRVITGNLMM 124 (484)
T ss_dssp CCEEEEEECSSCBEEECTTCCB--------------------CSCEECTTCCTTHHHHHHHHHHCT---THHHHHSSCCC
T ss_pred eEEEEEcCCcCcEEEECCCcCC--------------------CcccceecccCcHHHHHHHHHhHH---HHHHHhCCCCC
Confidence 9999999999999999999987 479999999999999999998752 46788999999
Q ss_pred CCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCChhhhcCCc
Q 022949 171 ERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKL 250 (289)
Q Consensus 171 ~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~~~~~LP~v 250 (289)
+.++++||+|+++|+||++++++++++++|||.|+|||+.. +|+|+||+|++||+++++|++++|+.+|++ .++||+|
T Consensus 125 ~~~~~~kl~wl~~~~P~~~~~~~~~l~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~-~~~lp~i 202 (484)
T 2itm_A 125 PGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFA-SDMSDAAGTMWLDVAKRDWSDVMLQACDLS-RDQMPAL 202 (484)
T ss_dssp TTSHHHHHHHHHHHCHHHHTTCCEEECHHHHHHHHHHSCCE-EEHHHHHTTTCEETTTTEECHHHHHTTTCC-GGGSCEE
T ss_pred cccHHHHHHHHHHhChHHHHHHhheeCcHHHHHHHHhCCce-eeHHHhhccccccCCCCCcCHHHHHHcCCC-HHHCCCc
Confidence 99999999999999999999999999999999999999987 999999999999999999999999999998 8999999
Q ss_pred ccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 251 APAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 251 ~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+++++++|++++++|+++||+ |+||++|+||++|+++|
T Consensus 203 ~~~~~~~G~~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g 240 (484)
T 2itm_A 203 YEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVG 240 (484)
T ss_dssp ECTTSEEEECCHHHHHHHTSC-CCEEECCEEHHHHHHHH
T ss_pred cCCcceeeccCHHHHHHhCCC-CCeEEEEchHHHHHHHh
Confidence 999999999999999999999 99999999999999875
No 6
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.5e-52 Score=406.36 Aligned_cols=242 Identities=19% Similarity=0.281 Sum_probs=222.5
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+++|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+.
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKP---GWVEHDPM----------EIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCC---CcEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999999999999999888876 57888888 9999999999987653
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
.+..+|.+|||++|++++++||++ |+| ++|+|+|+|.|+.++++++++.. +.++++++
T Consensus 68 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~ 126 (510)
T 2p3r_A 68 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 126 (510)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhheEEEEEeCCcCcEEEEECCCCeE--------------------CcccccccCccHHHHHHHHHhcc-cHHHHHHH
Confidence 456789999999999999999998 887 58999999999999999999874 46889999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhC--CcceecccccccccccccCCCCCcHHHHHH
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG--~~~~~d~s~As~tgl~d~~~~~W~~~ll~~ 238 (289)
||+++++.|+++||+|+++|+||+++++++ |++++|||.|+||| +.. +|+|+||+|+|||+++++||+++|+.
T Consensus 127 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 205 (510)
T 2p3r_A 127 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHV-TDYTNASRTMLFNIHTLDWDDKMLEV 205 (510)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTSSEETTTTEECHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCHHHHHHHhcCCeEecCHHHHHHHHhcCCCeEE-eehhHhhhhccccCccCCCCHHHHHH
Confidence 999999999999999999999999999998 67799999999999 565 99999999999999999999999999
Q ss_pred cCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 239 ~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+|++ .++||+|+++++++|++++ +.+| ++|+||++|++|++||++|
T Consensus 206 ~gi~-~~~LP~i~~~~~~~G~~~~---~~lG-~~g~pV~~g~~D~~aa~~g 251 (510)
T 2p3r_A 206 LDIP-REMLPEVRRSSEVYGQTNI---DGKG-GTRIPISGIAGDQQAALFG 251 (510)
T ss_dssp HTCC-GGGCCEEECSEEEEEEECT---TCTT-SCCEEEEEEEEHHHHHHHH
T ss_pred hCCC-HHHCCceecCCCceeeech---hhcC-CCCCeEEEECchHHHHHHh
Confidence 9998 8999999999999999986 3577 8999999999999999875
No 7
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=2.4e-52 Score=404.53 Aligned_cols=242 Identities=16% Similarity=0.265 Sum_probs=222.4
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+++|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+.
T Consensus 3 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 3 EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKS---GWVEHNAN----------EIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCC---CcEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999999998877876 57888888 9999999999887653
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
.+..+|.+|||++|++++++||++ |+| ++|+|+|+|.|+.++++++++.. ..++++++
T Consensus 70 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~~~ 128 (506)
T 3h3n_X 70 IRPEAIAGIGITNQRETTVVWDKTTGQP--------------------IANAIVWQSRQSSPIADQLKVDG-HTEMIHEK 128 (506)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhheEEEEeeCCcccEEEEeCCCCeE--------------------CCCceEecCcchHHHHHHHHhcc-CHHHHHHH
Confidence 456789999999999999999998 887 58999999999999999999874 46889999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhCC--cceecccccccccccccCCCCCcHHHHHH
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA--YACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG~--~~~~d~s~As~tgl~d~~~~~W~~~ll~~ 238 (289)
||+++++.++++||+|+++|+||+|+++++ |++++|||.|+|||+ .. +|+|+||+|+|||+++++|++++|+.
T Consensus 129 tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 207 (506)
T 3h3n_X 129 TGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHV-TDYSNASRTMLYNIHKLEWDQEILDL 207 (506)
T ss_dssp HSCCCCTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCE-EEHHHHHTTTSEETTTTEECHHHHHH
T ss_pred hCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCceee-eEHHHhhhhhCeecCCCCcCHHHHHH
Confidence 999999999999999999999999999986 777999999999994 55 99999999999999999999999999
Q ss_pred cCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 239 ~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+|++ .++||+|+++++++|++++++ ++| +|+||++|++|++||++|
T Consensus 208 ~gi~-~~~LP~i~~~~~~~G~~~~~~--~lg--~g~pV~~g~~D~~aa~~g 253 (506)
T 3h3n_X 208 LNIP-SSMLPEVKSNSEVYGHTRSYR--FYG--SEVPIAGMAGDQQAALFG 253 (506)
T ss_dssp TTCC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHH
T ss_pred cCcC-HHHCCceecCCCcceeeChHH--hcC--CCCeEEEECCcHHHHHHh
Confidence 9998 899999999999999999987 466 799999999999999875
No 8
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=5.3e-52 Score=401.71 Aligned_cols=242 Identities=18% Similarity=0.303 Sum_probs=221.9
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+++|+||||+|||++|++|+|.+|+++++.+++++..+|++ ||+||||+ +||+.+.++++++.+.
T Consensus 4 M~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 4 MEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQS---GWVEHDAN----------EIWTSVLAVMTEVINEND 70 (501)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHTTT
T ss_pred cccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCC---CcEEECHH----------HHHHHHHHHHHHHHHhcC
Confidence 45799999999999999999999999999999998877876 57888888 9999999999987654
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
.+..+|.+|||++|++++++||++ |+| ++|+|+|+|.|+.++++++++.. ..++++++
T Consensus 71 ~~~~~I~~Igis~~~~~~v~~D~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~~~ 129 (501)
T 3g25_A 71 VRADQIAGIGITNQRETTVVWDKHTGRP--------------------IYHAIVWQSRQTQSICSELKQQG-YEQTFRDK 129 (501)
T ss_dssp CCGGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CCcccEEEEEEECCcCcEEEEECCCCeE--------------------CCCceeeccCChHHHHHHHHhcc-CHHHHHHH
Confidence 456789999999999999999998 887 58999999999999999999874 46889999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhC--CcceecccccccccccccCCCCCcHHHHHH
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEA 238 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG--~~~~~d~s~As~tgl~d~~~~~W~~~ll~~ 238 (289)
||+++++.++++||+|+++|+||+|+++++ |++++|||.|+||| +.. +|+|+|++|+|||+++++|++++|+.
T Consensus 130 tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~l~~~~~dyl~~~LTG~~~~~-td~s~As~t~l~d~~~~~W~~~ll~~ 208 (501)
T 3g25_A 130 TGLLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTWLVWKLSGKAAHI-TDYSNASRTLMFNIHDLEWDDELLEL 208 (501)
T ss_dssp HSCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTSCCE-EEHHHHTTSSSEETTTTEECHHHHHH
T ss_pred HCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCCCeee-eeHHHhhcccCeeCCCCCCCHHHHHH
Confidence 999999999999999999999999999988 77799999999999 555 99999999999999999999999999
Q ss_pred cCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 239 TAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 239 ~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+|++ .++||+|+++++++|+++++. .+| +|+||++|++|++||++|
T Consensus 209 ~gi~-~~~LP~i~~~~~~~G~~~~~~--~~g--~g~pV~~g~~D~~aa~~g 254 (501)
T 3g25_A 209 LTVP-KNMLPEVKASSEVYGKTIDYH--FYG--QEVPIAGVAGDQQAALFG 254 (501)
T ss_dssp HTCC-GGGCCEEECSEEEEEECCGGG--TTT--CCCEEEEEEEHHHHHHHH
T ss_pred hCcC-HHHCCceecCCCceeccchHH--hCC--CCCeEEEECccHHHHHHh
Confidence 9998 899999999999999999864 455 899999999999999875
No 9
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=1.5e-52 Score=406.57 Aligned_cols=240 Identities=22% Similarity=0.299 Sum_probs=219.8
Q ss_pred CCceEEEEEcCCCceEEEEEc-CCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcC
Q 022949 8 KDSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d-~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (289)
.++|+||||+|||++|++|+| ++|+++.+.+.+++ +++||||+ +||++++++++++. .
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~---------g~~e~d~~----------~~~~~i~~~l~~~~--~ 61 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHP---------NGTSVDPS----------YWWSAFQEAAEQAG--G 61 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------SSSEECTH----------HHHHHHHHHHHHTT--C
T ss_pred CCcEEEEEEeccccEEEEEEECCCCeEEEEEEEeCC---------CCceECHH----------HHHHHHHHHHHhcC--C
Confidence 467999999999999999999 89999999988764 47899999 99999988887643 2
Q ss_pred CCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCC-h-------
Q 022949 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGG-A------- 158 (289)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~-~------- 158 (289)
..+|.+|||++|++++|+||++|+| ++|+|+|+|.|+.++++++++.++. .
T Consensus 62 -~~~I~~Igis~q~~~~v~~D~~G~p--------------------l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~ 120 (515)
T 3i8b_A 62 -LDDVSALAVGGQQHGMVILDNQGNV--------------------IRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPE 120 (515)
T ss_dssp -STTEEEEEEEECSSCBEEECTTSCB--------------------CSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCS
T ss_pred -ccCceEEEEeCCcceEEEECCCCCC--------------------cCCcceecCCCHHHHHHHHHHhcCcccccccccc
Confidence 4789999999999999999999998 5899999999999999999998743 2
Q ss_pred -------HHHHHHHCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCc------------ceecccccc
Q 022949 159 -------LELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAY------------ACIDETDAA 219 (289)
Q Consensus 159 -------~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~------------~~~d~s~As 219 (289)
++++++||+++++.++++||+|+++|+||+|++++++++++|||.|+|||+. .++|+|+||
T Consensus 121 ~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As 200 (515)
T 3i8b_A 121 DPIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDAS 200 (515)
T ss_dssp SHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHT
T ss_pred cccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHHHhh
Confidence 7899999999999999999999999999999999999999999999999982 249999999
Q ss_pred cccccccCCCCCcHHHHHHc-CCC----------hhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCC
Q 022949 220 GMNLMDIRQRVWSKIVLEAT-APS----------LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLA 288 (289)
Q Consensus 220 ~tgl~d~~~~~W~~~ll~~~-g~~----------~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~ 288 (289)
+|+|||+++++|++++|+.+ |++ +.++||+|+++++++|++++++|+++||++|+||++|++|++|+++
T Consensus 201 ~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~l 280 (515)
T 3i8b_A 201 GTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASL 280 (515)
T ss_dssp TSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHH
T ss_pred cccCeeCCcCccCHHHHHhhcCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHh
Confidence 99999999999999999998 874 0268999999999999999999999999999999999999999987
Q ss_pred C
Q 022949 289 G 289 (289)
Q Consensus 289 G 289 (289)
|
T Consensus 281 G 281 (515)
T 3i8b_A 281 G 281 (515)
T ss_dssp H
T ss_pred h
Confidence 5
No 10
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.7e-52 Score=402.15 Aligned_cols=245 Identities=22% Similarity=0.327 Sum_probs=222.2
Q ss_pred CCCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 5 SLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 5 ~~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
+=|+++|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+
T Consensus 21 ~~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~---g~~e~dp~----------~~~~~i~~~i~~~~~ 87 (520)
T 4e1j_A 21 QSMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKS---GWVEHDPE----------EIWQTVVSTVKEAIE 87 (520)
T ss_dssp CCCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHH
T ss_pred HHHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCC---CcEEECHH----------HHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999998878876 57888888 999999999998765
Q ss_pred c--CCCCCEeEEEeccCceeeEEec-CCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHH
Q 022949 85 S--LDLSKVTAVSGSGQQHGSVYWK-KGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALEL 161 (289)
Q Consensus 85 ~--~~~~~I~aIgis~~~~~~v~~d-~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~ 161 (289)
. .+..+|.+|||++|++++++|| ++|+| ++|+|+|+|.|+.++++++++.. +.+++
T Consensus 88 ~~~~~~~~I~~Igis~~g~~~v~~D~~~G~~--------------------l~~~i~W~D~R~~~~~~~l~~~~-~~~~~ 146 (520)
T 4e1j_A 88 KSGITANDIAAIGITNQRETVVVWDRETGKP--------------------IHNAIVWQDRRTAAFCDKLKKKG-LEKTF 146 (520)
T ss_dssp TTTCCGGGEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHH
T ss_pred hcCCCcccEEEEEEeCCcceEEEEECCCCeE--------------------CccccccccCCHHHHHHHHHhcc-cHHHH
Confidence 4 4567899999999999999999 58987 58999999999999999999874 56789
Q ss_pred HHHHCCCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhCC-cceecccccccccccccCCCCCcHHHH
Q 022949 162 SKLTGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA-YACIDETDAAGMNLMDIRQRVWSKIVL 236 (289)
Q Consensus 162 ~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG~-~~~~d~s~As~tgl~d~~~~~W~~~ll 236 (289)
+++||.++++.++++||+|+++|+||+|+|+++ |.+++|||.|+|||+ ..++|+|+||+|+|||+++++||+++|
T Consensus 147 ~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll 226 (520)
T 4e1j_A 147 VKKTGLLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATNASRTLLYNIAENAWDDELT 226 (520)
T ss_dssp HHHHSSCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHHHTTSSSEETTTTEECHHHH
T ss_pred HHHHCCCCCchhHHHHHHHHHHcChHHHHHHhcCCeEecCHHHHHHHHhcCCCeeeecHHHhhhhcccccccCCCCHHHH
Confidence 999999999999999999999999999999986 667999999999996 234999999999999999999999999
Q ss_pred HHcCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 237 EATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 237 ~~~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+.+|++ .++||+|+++++++|+++++ ||++|+||++|++|++|+++|
T Consensus 227 ~~~gi~-~~~LP~i~~~~~~~G~~~~~-----~l~~g~pV~~g~~D~~aa~~g 273 (520)
T 4e1j_A 227 EVLRVP-KEMLPEVKDCAADFGVTDPS-----LFGAAIPILGVAGDQQAATIG 273 (520)
T ss_dssp HHHTCC-GGGSCEEECSBSCCCBCCHH-----HHTSCCBEEEECCHHHHHHHH
T ss_pred HHcCCC-HHHCCceecCCCceeeeChh-----hCCCCCeEEEECCcHHHHHHh
Confidence 999998 89999999999999999874 467899999999999999875
No 11
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.5e-52 Score=399.87 Aligned_cols=233 Identities=16% Similarity=0.095 Sum_probs=212.7
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
.+|+||||+|||++|++|+|.+|+++++.+++++. +|++ ||+||||+ +||+.+.++++++. .
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~-~~~~---g~~eqdp~----------~~~~~~~~~i~~~~-~--- 66 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIP-LEID---GIRRLDAP----------DTGRWLLDVLSRYA-D--- 66 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCC-EESS---SCEECCHH----------HHHHHHHHHHHHTT-T---
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCc-ccCC---CceeECHH----------HHHHHHHHHHHHHH-h---
Confidence 56999999999999999999999999999999985 4554 57888887 99999999998865 2
Q ss_pred CCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHCCC
Q 022949 89 SKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSR 168 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG~~ 168 (289)
.+|.+|||++|++++++|| +|+| ++|+|+|+|.|+.++++++++..+ .+++||++
T Consensus 67 ~~I~aIgis~~~~~~v~~D-~G~p--------------------l~~ai~w~D~R~~~~~~~l~~~~~----~~~~tG~~ 121 (482)
T 3h6e_A 67 HPVTTIVPVGHGAGIAALT-DGRL--------------------AFPPLDYEQSIPEAVMADYRSQRD----PFARTGSP 121 (482)
T ss_dssp SCCCEEEEEECSSCEEEEE-TTEE--------------------CSCCBCTTSCCCHHHHHHHHTTCC----CHHHHCCC
T ss_pred cCCCEEEEecCcCCEEEEC-CCCE--------------------eccccccCCcccHHHHHHHHhhCh----HHHHhCCC
Confidence 5799999999999999999 9998 589999999999999999987642 28999999
Q ss_pred CCCC--ChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccc-cccccccccCCCCCcHHHHHHcCCChhh
Q 022949 169 GYER--FTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETD-AAGMNLMDIRQRVWSKIVLEATAPSLEE 245 (289)
Q Consensus 169 ~~~~--~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~-As~tgl~d~~~~~W~~~ll~~~g~~~~~ 245 (289)
++++ ++++||+|+++|+||+|+|++ |++++|||.|+|||+.. +|+|+ ||+|+|||+++++|+ ++|+.+|++ +
T Consensus 122 ~~~~~~~~~~kl~Wl~~~~Pe~~~~~~-~l~~~dyl~~~LTG~~~-td~s~~As~t~l~d~~~~~W~-~ll~~~gi~--~ 196 (482)
T 3h6e_A 122 ALPDGLNIGSQLWWLDQLHPDVMANAT-LLPWAQYWAWFLTGRAV-SEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA--A 196 (482)
T ss_dssp CCSTTSSHHHHHHHHHHHSHHHHHSCE-EEEHHHHHHHHTTSCCC-EEHHHHTTTCSSEETTTTEEC-HHHHHTTCG--G
T ss_pred CCCCchhHHHHHHHHHHcCchhhhcCE-EEccHHHHHHHHhCCee-eecchhhhccCCccCCcCcHH-HHHHHcCCH--H
Confidence 9998 899999999999999999999 99999999999999987 99997 899999999999999 599999995 8
Q ss_pred hcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 246 KLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 246 ~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
+||+|+++++++|++++++|+++||++|+||++|++|++||++|
T Consensus 197 ~LP~v~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG 240 (482)
T 3h6e_A 197 RFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLA 240 (482)
T ss_dssp GBCCEECTTSEEEECCHHHHHHHTCCTTCEEECCEEHHHHHHHH
T ss_pred hCCCCcCCCceeeeeCHHHHHHhCCCCCCEEEEeCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999875
No 12
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=3.2e-52 Score=409.14 Aligned_cols=255 Identities=16% Similarity=0.235 Sum_probs=220.6
Q ss_pred CceEEEEEcCCCceEEEEEcC-CCCEEEEEEeecc-----cCCCc------cCCCCceeeCCCCCCCcCCChhHHHHHHH
Q 022949 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFD-----SELPH------YKTKDGVYRDPSNNGRIVSPTLMWIEALD 76 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~~-----~~~~~------~~~~g~~e~d~~~~~~~~~~~~~~~~~~~ 76 (289)
.+|+||||+|||++|++|+|. +|+++++.+.+|+ ..+|+ + ||+||||+ +||+++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~---g~~eqdp~----------~~~~~~~ 70 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGH---EWALQHPL----------DYVEVLT 70 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCT---TCCEECHH----------HHHHHHT
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCC---CcEEECHH----------HHHHHHH
Confidence 579999999999999999998 9999999999998 44454 3 45666666 9999999
Q ss_pred HHHHHHHhc--CCCCCEeEEEeccCceeeEEecCCCcccccCCCC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 77 LMLQKLSKS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 77 ~~~~~l~~~--~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
++++++.+. .+..+|.+|||++|++++++||++|+|+.+.... +.| ..++|+|+|.|+.++++++++
T Consensus 71 ~~i~~~l~~~~~~~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p----------~~~ai~W~D~R~~~~~~~l~~ 140 (572)
T 3jvp_A 71 TSVPAVMKESGVDADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNP----------HSWVKLWKHHAAQDKANAINE 140 (572)
T ss_dssp THHHHHHHC---CCSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSG----------GGSEECTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHEEEEEEecCCCcEEEECCCCCCCccCccccccc----------cccceecCccchHHHHHHHHH
Confidence 999887654 5567899999999999999999999984211110 001 134899999999999999988
Q ss_pred HhCC-hHHHHHHHCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCC-
Q 022949 154 AVGG-ALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVW- 231 (289)
Q Consensus 154 ~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W- 231 (289)
.++. .++++++||+++++.|+++||+|+++|+||+|+++++|++++|||.|+|||+.. +|+|+|+.|+||| ++++|
T Consensus 141 ~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d-~~~~W~ 218 (572)
T 3jvp_A 141 MAEKRGEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSCTAGYKAIWH-KREGYP 218 (572)
T ss_dssp HHHHHTCTTGGGGTTCCCSSSHHHHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHHHHHHHSCCB-TTTBSC
T ss_pred hccccHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehhhccccceeC-CCCCcC
Confidence 6421 257889999999999999999999999999999999999999999999999987 9999999999999 99999
Q ss_pred cHHHHHHcCC-----Chhhhc-CCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 232 SKIVLEATAP-----SLEEKL-GKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 232 ~~~ll~~~g~-----~~~~~L-P~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
|+++|+.+|+ + .++| |+|+++++++|+|++++|+++||++|+||++|++|++||++|
T Consensus 219 ~~ell~~~g~~l~~i~-~~~L~p~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g 281 (572)
T 3jvp_A 219 SNEFFKALDPRLEHLT-TTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPA 281 (572)
T ss_dssp CHHHHHTTCGGGTTST-TTTTCSCEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHH
T ss_pred CHHHHHHhCcccccCC-HhHCCCccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhh
Confidence 9999999984 3 4566 899999999999999999999999999999999999999875
No 13
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.3e-51 Score=401.07 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=219.4
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+++|+||||+||||+|++|||.+|++++..+.+++..+|+| ||+||||+ +||++++++++++.+.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~---G~~Eqdp~----------~~w~~~~~~i~~~l~~~~ 68 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKP---GWVEHDPM----------EIWATQSSTLVEVLAKAD 68 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCC---CcEEECHH----------HHHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999999999999999888887 57999998 9999999999887653
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
+++.+|.+|||++|++++|+||++ |+| ++|+|+|+|.|+..+++++++.. ..+.++++
T Consensus 69 ~~~~~I~aIgis~q~~~~v~~D~~~G~p--------------------l~~ai~W~D~R~~~~~~~l~~~~-~~~~i~~~ 127 (526)
T 3ezw_A 69 ISSDQIAAIGITNQRETTIVWEKETGKP--------------------IYNAIVWQCRRTAEICEHLKRDG-LEDYIRSN 127 (526)
T ss_dssp CCGGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHTT-CHHHHHHH
T ss_pred CChhhEEEEEEeCCCCCEEEEECCCCeE--------------------cccceecCCcchHHHHHHHHhhc-cHHHHHHH
Confidence 677899999999999999999985 887 58999999999999999999874 56789999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhccccc----ccchhHHHHhhC-CcceecccccccccccccCCCCCcHHHHHHc
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTERIS----VVSSFMASLLIG-AYACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~----~~~d~l~~~LtG-~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~ 239 (289)
||.++++.++++||+|+++|+|++++++++++ .+.+||.|+||| ...++|+|+|++|+|||+++++|++++++.+
T Consensus 128 tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~As~t~l~d~~~~~w~~~ll~~~ 207 (526)
T 3ezw_A 128 TGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVL 207 (526)
T ss_dssp HCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHH
T ss_pred hCCCCCcccHHHHHHHHHHcCchHHHHHHHhhhhccchhHHHhhhhcCCCceEEEchhhccccCcCccccCcCHHHHHHc
Confidence 99999999999999999999999999999844 467788888886 3445999999999999999999999999999
Q ss_pred CCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 240 g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
|++ .++||+|+++++++|+++++++ +..|+||++|++|++||++|
T Consensus 208 gi~-~~~LP~i~~~~~~~G~~~~~~~----~~~gipV~~g~gD~~aa~~G 252 (526)
T 3ezw_A 208 DIP-REMLPEVRRSSEVYGQTNIDGK----GGTRIPISGIAGDQQAALFG 252 (526)
T ss_dssp TCC-GGGCCEEECSEEEEEEECTTCT----TSCCEEEEEEEEHHHHHHHH
T ss_pred CCC-HHHCCCccccccccCccchhhh----cCCCCcEEEEcchHHHHhhh
Confidence 998 8999999999999999998765 34578999999999999875
No 14
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.1e-50 Score=392.16 Aligned_cols=239 Identities=21% Similarity=0.322 Sum_probs=220.6
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--C
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 86 (289)
.+|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+. .
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~~~~~i~~~~~~~~~ 68 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRP---GWVEHNPE----------EIWDAQLRAIKDAIQSARI 68 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCST---TCCEECHH----------HHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCC---CcEEECHH----------HHHHHHHHHHHHHHHhcCC
Confidence 3589999999999999999999999999999998877776 57888888 9999999999987653 4
Q ss_pred CCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHC
Q 022949 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (289)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG 166 (289)
+..+|.+|||++|++++++||++|+| ++|+|+|+|.|+.++++++++. ..++++++||
T Consensus 69 ~~~~i~~Igis~~~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~--~~~~~~~~tG 126 (497)
T 2zf5_O 69 EPNQIAAIGVTNQRETTLVWDKDGKP--------------------LYNAIVWQCRRTAEMVEEIKRE--YGTMIKEKTG 126 (497)
T ss_dssp CGGGEEEEEEEECSSCEEEECTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH--HHHHHHHHHS
T ss_pred CcccEEEEEEecCCCcEEEECCCCCC--------------------cccceeecccCcHHHHHHHHhh--hHHHHHHHhC
Confidence 55689999999999999999999987 4799999999999999999886 2478999999
Q ss_pred CCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCC
Q 022949 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPS 242 (289)
Q Consensus 167 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~ 242 (289)
.++++.++++||+|+++|+|++++++++ |++++|||.|+|||+.. +|+|+||+|++||+++++|++++|+.+|++
T Consensus 127 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~-td~s~As~t~l~d~~~~~W~~~ll~~~gi~ 205 (497)
T 2zf5_O 127 LVPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTFLIYRLTGEHV-TDYSNASRTMLFNIKKLDWDDELLELFDIP 205 (497)
T ss_dssp SCCCTTSHHHHHHHHHHHSTTHHHHHHTTCCEEEEHHHHHHHHHHSCCE-EEHHHHTTSSSEETTTTEECHHHHHHTTCC
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHhcCCCEEEcHHHHHHHHHhCCee-eeHHHhhhhcCccCCCCCcCHHHHHHcCcC
Confidence 9999999999999999999999999988 88999999999999887 999999999999999999999999999998
Q ss_pred hhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 243 LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 243 ~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
.++||+|+++++++|+++++ .+| +|+||++|++|++|+++|
T Consensus 206 -~~~lP~i~~~~~~~G~~~~~---~~g--~g~pV~~g~~D~~aa~~g 246 (497)
T 2zf5_O 206 -ESVLPEVRESSEVYGYTKKE---LLG--AEIPVSGDAGDQQAALFG 246 (497)
T ss_dssp -GGGCCEEECSEEEEEECCHH---HHS--SCCEEEEEEEHHHHHHHH
T ss_pred -HHHCCCcCCCCCeeeecCHH---HcC--CCCeEEEEccHHHHHHHh
Confidence 79999999999999999987 588 899999999999999875
No 15
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=8.2e-51 Score=397.77 Aligned_cols=249 Identities=16% Similarity=0.181 Sum_probs=218.8
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+.+|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+++.++++++.+.
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~---g~~eqdp~----------~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 3 LASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKA---DFVEQSSE----------NIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEET---TEEEECHH----------HHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCC---CccccCHH----------HHHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999999999999998777776 57899988 9999999999987653
Q ss_pred CCCCCEeEEEeccCceeeEEecCCCcccccCCCCC-CCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~-~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
....+|.+|||++| +++|+||++|+|+. +++. .| .+|+|+|+|.|+.++++++++. + ++++++
T Consensus 70 ~~~~~I~~Igis~~-~~~v~~D~~G~pl~--~~~~~~~----------~~~ai~W~D~Ra~~~~~~l~~~-~--~~~~~~ 133 (554)
T 3l0q_A 70 INPIQVKGLGFDAT-CSLVVLDKEGNPLT--VSPSGRN----------EQNVIVWMDHRAITQAERINAT-K--HPVLEF 133 (554)
T ss_dssp CCGGGEEEEEEEEC-SCEEEEETTSCBCC--CSTTCCT----------TCCEECTTCCTTHHHHHHHHHH-T--CGGGGG
T ss_pred CCHhHEEEEEEcCC-CceEEECCCCCEee--ccCCCCC----------CCCcEEecccchHHHHHHHHHh-H--HHHHHH
Confidence 45678999999998 79999999999841 1111 12 3799999999999999999986 2 578999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccc--cccCCCCCcHHHHHHcCCC
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNL--MDIRQRVWSKIVLEATAPS 242 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl--~d~~~~~W~~~ll~~~g~~ 242 (289)
||+++++.|+++||+|+++|+||+|+++++|++++|||.|+|||+.. +|+++.+++ ||+++++|++++|+.+|++
T Consensus 134 tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~~~~~~dyl~~~LTG~~~---~s~as~t~~~~~d~~~~~W~~~ll~~~gi~ 210 (554)
T 3l0q_A 134 VGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDET---RSLCSTVCKWTYLGHEDRWDPSYFKLVGLA 210 (554)
T ss_dssp BTTCCCTTSHHHHHHHHHHHCHHHHHHEEEEEEHHHHHHHHHHSCCC---EEHHHHHHHSCCBTTTTBCCHHHHHHHTCG
T ss_pred hCCCCChhhHHHHHHHHHHhChHHHHHhceEEcHHHHHHHHHhCCcc---ccccchhhccccccccCCCCHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999864 466666654 7889999999999999986
Q ss_pred hh------hhcC-CcccCCccce-ecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 243 LE------EKLG-KLAPAHAVAG-CIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 243 ~~------~~LP-~v~~~g~~~G-~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
. ++|| +|+++++++| +|++++|+++||++|+||++|++|++|+++|
T Consensus 211 -~~~~~~~~~Lp~~i~~~~~~~G~~lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg 264 (554)
T 3l0q_A 211 -DLLDNNAAKIGATVKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIG 264 (554)
T ss_dssp -GGGHHHHTTTCSCEECTTCBCTTSSCHHHHHHHTCCTTCEEBCCEEHHHHHHHH
T ss_pred -cccchhHHhCCCcccCCcCeeCcccCHHHHHHhCCCCCCeEEEeChHHHhHHhh
Confidence 3 2899 6999999999 8999999999999999999999999998754
No 16
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-50 Score=389.41 Aligned_cols=239 Identities=22% Similarity=0.298 Sum_probs=218.7
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--CC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (289)
+|+||||+|||++|++|+|.+|+++.+.+.+++..+|++ ||+||||+ +||+.+.++++++.+. .+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKP---GWVEHDPL----------EIWETTLWAAREVLRRAGAE 68 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSST---TCCEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCC---CcEeeCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999999999998777776 57888888 9999999999987653 44
Q ss_pred CCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHC
Q 022949 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (289)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG 166 (289)
..+|.+|||++|++++++||++ |.+ ++|.|+|+|.|+.++++++++. +..++++++||
T Consensus 69 ~~~i~~Igis~~~~~~~~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~-~~~~~~~~~tG 127 (495)
T 2dpn_A 69 AGEVLALGITNQRETTLLWDRKTGKP--------------------LHNAIVWQDRRTTPLCEALRAK-GLEPLFRERTG 127 (495)
T ss_dssp GGGCCEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHT-TCHHHHHHHTS
T ss_pred cccEEEEEEeCCCccEEEEECCCCcC--------------------CccceeecccChHHHHHHHHhc-cchhHHHHHhC
Confidence 5679999999999999999998 887 4789999999999999999876 34578999999
Q ss_pred CCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhC--CcceecccccccccccccCCCCCcHHHHHHcC
Q 022949 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--AYACIDETDAAGMNLMDIRQRVWSKIVLEATA 240 (289)
Q Consensus 167 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG--~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g 240 (289)
.++++.++++||+|+++|+|++|+++++ |++++|||.|+||| +.. +|+|+||+|+|||+++++|++++|+.+|
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~g 206 (495)
T 2dpn_A 128 LLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGGKVHA-TDPTNASRTLLFNLHTLAWDPELLEALG 206 (495)
T ss_dssp CCSCTTSHHHHHHHHHHHSSSHHHHHHHTCEEEECHHHHHHHHHTTTSCCE-ECHHHHTTSSSEETTTTEECHHHHHHTT
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHhcCCcEEECHHHHHHHHhcCCCeEE-EehHHhHhhcCccCccCCcCHHHHHHcC
Confidence 9999999999999999999999999998 89999999999999 666 9999999999999999999999999999
Q ss_pred CChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 241 PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 241 ~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
++ .++||+|+++++++|+++++ .+| +|+||++|++|++|+++|
T Consensus 207 i~-~~~lP~i~~~~~~~G~~~~~---~~G--~g~pV~~g~~D~~aa~~g 249 (495)
T 2dpn_A 207 IP-AALLPEVRPSDGDFGETLPE---LLG--APVPIRGVLGDQQAALFG 249 (495)
T ss_dssp CC-STTCCEECCTTSCCCBCCHH---HHS--SCCBEEEEEEHHHHHHHH
T ss_pred CC-HHHCCCccCCCCeeEeccHH---HcC--CCCeEEEECcHHHHHHHh
Confidence 88 79999999999999999987 588 899999999999999875
No 17
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=7.3e-50 Score=386.99 Aligned_cols=239 Identities=21% Similarity=0.291 Sum_probs=218.4
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--CC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (289)
+|+||||+|||++|++|+|.+|+++++.+.+++..+|++ ||+||||+ +||+.+.++++++.+. .+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 68 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRA---GWVEHNPE----------QIWNNVREVVGLALTRGNLT 68 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSST---TCCEECHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCC---CceeECHH----------HHHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999999998777776 57888888 9999999999987653 44
Q ss_pred CCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHHHC
Q 022949 88 LSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTG 166 (289)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~tG 166 (289)
..+|.+|||++|++++++||++ |.+ ++|.|+|+|.|+.++++++++..+ .++++++||
T Consensus 69 ~~~i~~Igis~~g~~~v~vD~~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG 127 (504)
T 2d4w_A 69 HEDIAAVGITNQRETAVVWDKTTGKP--------------------VYNAIVWQDTRTQKIVDELGGDEG-AEKYKSIVG 127 (504)
T ss_dssp GGGEEEEEEEECSSCBEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHCSSC-GGGGHHHHS
T ss_pred cccEEEEEEeCCCCeEEEEECCCCCC--------------------ccccceecccChHHHHHHHHhhcc-hHHHHHHhC
Confidence 5689999999999999999998 887 478999999999999999987553 578999999
Q ss_pred CCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhC--C---cceecccccccccccccCCCCCcHHHHH
Q 022949 167 SRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIG--A---YACIDETDAAGMNLMDIRQRVWSKIVLE 237 (289)
Q Consensus 167 ~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG--~---~~~~d~s~As~tgl~d~~~~~W~~~ll~ 237 (289)
.++++.++++||+|+++|+|++|+++++ |++++|||.|+||| + .. +|+|+||+|+|||+++++|++++|+
T Consensus 128 ~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~As~t~l~d~~~~~W~~~ll~ 206 (504)
T 2d4w_A 128 LPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGTEGGVHV-TDVTNASRTMLMDLDTLSWREDIAA 206 (504)
T ss_dssp CCSCTTSHHHHHHHHHHHSTTHHHHHHHTCEEEECHHHHHHHHHTTTTTTCCCE-EEHHHHTTTTCEETTTTEECHHHHH
T ss_pred CCCCchhHHHHHHHHHHcChhHHHHHhcCCeEEecHHHHHHHHhcCCCcCCcee-eehhhhhhhcCccCCCCccCHHHHH
Confidence 9999999999999999999999999998 99999999999999 5 65 9999999999999999999999999
Q ss_pred HcCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEEccchhhhcCCC
Q 022949 238 ATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 238 ~~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~g~~D~~aa~~G 289 (289)
.+|++ .++||+|+++++++|+++++ +.+| + +||++|++|++|+++|
T Consensus 207 ~~gi~-~~~lP~i~~~~~~~G~~~~~--~~~G--~-~pV~~g~~D~~aa~~g 252 (504)
T 2d4w_A 207 DMGIP-LSMLPDIRSSSEVYGHGRPR--GLVP--G-VPIAGILGDQQAATFG 252 (504)
T ss_dssp HTTCC-GGGSCEEECSEEEEEECCTT--SSST--T-CEEEEEEEHHHHHHHH
T ss_pred HhCCC-HHHCCCccCCccceeccchH--HhCC--C-CeEEEECCcHHHHHhh
Confidence 99988 89999999999999999985 3578 6 9999999999999875
No 18
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=2.1e-49 Score=383.77 Aligned_cols=240 Identities=20% Similarity=0.246 Sum_probs=218.0
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc----
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS---- 85 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 85 (289)
+|+||||+|||++|++|+|.+|+++.+.+.+++..+|++ ||+||||+ +||+.+.++++++.+.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~---g~~e~d~~----------~~~~~i~~~i~~~~~~~~~~ 70 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKP---GWYEHDPI----------EIMTNLYNLMNEGIKVLKDK 70 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCST---TCCEECHH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCC---CcEEECHH----------HHHHHHHHHHHHHHHHhhcC
Confidence 589999999999999999999999999999998777776 57888888 9999999999886542
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-CcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKL 164 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~~~ 164 (289)
.+..+|.+|||++|++++++||++ |.+ ++|.|+|+|.|+.++++++++. +..++++++
T Consensus 71 ~~~~~i~~Igis~~~~~~~~~D~~~G~~--------------------l~~~i~w~D~r~~~~~~~l~~~-~~~~~~~~~ 129 (503)
T 2w40_A 71 YTSVIIKCIGITNQRETVIIWDRITGKP--------------------LYNAIVWLDTRVEELVTEFSAK-YNNNDIQKK 129 (503)
T ss_dssp SSSCEEEEEEEEECSSCEEEEETTTCCB--------------------SSCEECTTCCTTHHHHHHHHHH-SCHHHHHHH
T ss_pred CCccceEEEEEcCCcceEEEEECCCCcC--------------------CccceeecccCcHHHHHHHHhc-cchHHHHHH
Confidence 345679999999999999999998 887 4789999999999999999987 446789999
Q ss_pred HCCCCCCCChHHHHHHHHhcCcchHhhccc----ccccchhHHHHhhCC-cceecccccccccccccCCCCCcHHHHHHc
Q 022949 165 TGSRGYERFTGPQIRKLFQTQPGVYDDTER----ISVVSSFMASLLIGA-YACIDETDAAGMNLMDIRQRVWSKIVLEAT 239 (289)
Q Consensus 165 tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~d~l~~~LtG~-~~~~d~s~As~tgl~d~~~~~W~~~ll~~~ 239 (289)
||.++++.++++||+|+++|+||+++++++ |++++|||.|+|||+ .. +|+|+||+|++||+++++|++++|+.+
T Consensus 130 tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~ 208 (503)
T 2w40_A 130 TGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKGNCY-TDVTNASRTLLMDINTLQWDEKMCKIF 208 (503)
T ss_dssp HSSCCCSSSHHHHHHHHHHHCHHHHHHHHTTCEEEEEHHHHHHHHHHTSCCE-EEHHHHTTTTCBCTTTCSBCHHHHHHT
T ss_pred hCCCCCcccHHHHHHHHHHhChHHHHHHhcCCeEEECHHHHHHHHHcCCCcc-ccHHHhhhhcCccCCCCccCHHHHHHc
Confidence 999999999999999999999999999999 999999999999995 65 999999999999999999999999999
Q ss_pred CCChhhhcCCcccCCccceecCHHHHHHcCCCC--CCeEEEccchhhhcCCC
Q 022949 240 APSLEEKLGKLAPAHAVAGCIAPYFVERFHFNK--NCLVVQWSGDNPNSLAG 289 (289)
Q Consensus 240 g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~--g~pV~~g~~D~~aa~~G 289 (289)
|++..++||+|+++++++|+++++ .+| + |+||++|++|++|+++|
T Consensus 209 gi~~~~~lP~i~~~~~~~G~~~~~---~~g--~~~g~pV~~g~~D~~aa~~g 255 (503)
T 2w40_A 209 NITNMSVLPEIKSNCSNFGLVKSE---HVP--DYLNIPITGCIGDQQSACIG 255 (503)
T ss_dssp TCCCGGGSCEEECSEEEEEECCCT---TSG--GGTTCEEEEEEEHHHHHHHH
T ss_pred CCChHHHCCCccCCcCceeeccHH---HcC--CCCCceEEEECchHHHHHHh
Confidence 975238999999999999999987 578 6 99999999999999875
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=1.9e-49 Score=382.66 Aligned_cols=239 Identities=15% Similarity=0.108 Sum_probs=209.9
Q ss_pred CCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeeccc----CCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHH
Q 022949 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDS----ELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKL 82 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~----~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l 82 (289)
|..+++||||+|||++|++|+|.+|+++...+.++.. ..+++ ++.++||+ +||+++.++++++
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~---g~~e~d~~----------~~~~~i~~~~~~~ 67 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQN---GYVTWDVD----------SLESAIRLGLNKV 67 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEET---TEEECCHH----------HHHHHHHHHHHHH
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccC---CeEEECHH----------HHHHHHHHHHHHH
Confidence 4567899999999999999999999988877665432 12222 34555555 9999999999887
Q ss_pred HhcCCCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHHHHHhCChHHHH
Q 022949 83 SKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELS 162 (289)
Q Consensus 83 ~~~~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~~~~~~~~~~ 162 (289)
... ..+|.+|||++|++++++||++|+| ++|+|+|+|.|+.++++++++.++ .++++
T Consensus 68 ~~~--~~~i~~Igis~q~~~~v~~D~~G~~--------------------l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~ 124 (489)
T 2uyt_A 68 CAA--GIAIDSIGIDTWGVDFVLLDQQGQR--------------------VGLPVAYRDSRTNGLMAQAQQQLG-KRDIY 124 (489)
T ss_dssp HHT--TCCCCEEEEEECSSCEEEECTTSCE--------------------ESCCBCTTCGGGTTHHHHHHHHHC-HHHHH
T ss_pred HhC--CCCceEEEEecCcccEEEECCCCCC--------------------ccCCccccCCccHHHHHHHHHhcC-HHHHH
Confidence 542 4579999999999999999999987 478999999999999999998874 57899
Q ss_pred HHHCCCCCCCChHHHHHHHHhcCcchHhhcccccccchhHHHHhhCCcceecccccccccccccCCCCCcHHHHHHcCCC
Q 022949 163 KLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPS 242 (289)
Q Consensus 163 ~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~d~l~~~LtG~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~g~~ 242 (289)
++||+++++.++++||+|+++|+||+|++++++++++|||.|+|||+.. +|+|+||+|+|||+++++||+++|+.+|++
T Consensus 125 ~~tG~~~~~~~~~~kl~Wl~~~~P~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 203 (489)
T 2uyt_A 125 QRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMN-WEYTNATTTQLVNINSDDWDESLLAWSGAN 203 (489)
T ss_dssp HHHCCCCCTTSHHHHHHHHHHHCGGGGGGCCEEEEHHHHHHHHHHSCCC-CBHHHHGGGTCEETTTTEECHHHHHHHTCC
T ss_pred HHhCCCCCCccHHHHHHHHHhcCchHHHHhhhccCcHHHHHHHHhCCcc-ceehhhhhhcccccCcCccCHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999987 999999999999999999999999999988
Q ss_pred hhhhcCCcccCCccceecCHHHHHHcCCCCCCeEEE-ccchhhhcCCC
Q 022949 243 LEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQ-WSGDNPNSLAG 289 (289)
Q Consensus 243 ~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV~~-g~~D~~aa~~G 289 (289)
.++||+|+++++++|+++.. .| +|+||++ |++|++|+++|
T Consensus 204 -~~~lP~i~~~~~~~G~~~~~----~~--~g~pV~~~g~~D~~aa~~g 244 (489)
T 2uyt_A 204 -KAWFGRPTHPGNVIGHWICP----QG--NEIPVVAVASHDTASAVIA 244 (489)
T ss_dssp -GGGSCCCBCTTCEEEEEECT----TC--CEEEEECCCCBHHHHHHHH
T ss_pred -HHHCCCccCCCcceeeeecc----cC--CCCcEEEECchHHHHHHhc
Confidence 89999999999999998642 23 7899998 88999999875
No 20
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.00 E-value=5.4e-10 Score=101.21 Aligned_cols=120 Identities=11% Similarity=0.117 Sum_probs=91.1
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+.+|+||||+|+|++|++++|.+|+++.+.+.+++. +.+++ ++++.+.++++.+.+.
T Consensus 4 m~~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~-----------~~~~~----------~~~~~l~~~i~~~~~~~~ 62 (326)
T 2qm1_A 4 MDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNI-----------LEDGK----------HIVPSIIESIRHRIDLYN 62 (326)
T ss_dssp GGCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC-----------TTTTT----------THHHHHHHHHHHHHHHTT
T ss_pred cccEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCC-----------CCCHH----------HHHHHHHHHHHHHHHHcC
Confidence 346999999999999999999999999988776541 23556 7888888888886653
Q ss_pred CCCCCEeEEEeccCceeeEEecCCCcccc-c-CCCC-CC-CccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKGSATIL-S-SLDP-KK-PLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~~~-~~-~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
.+..+|.+|||+..+ ++|.+.+.+. + +++| +. +|.+.|++.|+ .|+.+.||.++..++|.+..
T Consensus 63 ~~~~~i~~igi~~pG----~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~-~pv~v~ND~~aaa~~e~~~g 129 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPG----SVDIEKGTVVGAYNLNWTTVQPVKEQIESALG-IPFALDNDANVAALGERWKG 129 (326)
T ss_dssp CCGGGEEEEEEEESS----EEETTTTEEECBGGGTBCSCBCHHHHHHHHHC-SCEEEEEHHHHHHHHHHHHS
T ss_pred CCccceeEEEEeccc----ceeCCCCEEEecCCCCccCCchHHHHHHHHhC-CCEEEecHHHHHHHHHHHhC
Confidence 344679999999754 4476543322 2 3555 35 88888888887 48999999999998887753
No 21
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.93 E-value=2e-09 Score=100.73 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=90.4
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+..|+||||+|+|++|++++|.+|+++.+.+.+++ +++++ .+++.+.++++.+.+.
T Consensus 83 ~~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~~~~~ 140 (406)
T 1z6r_A 83 EAWHYLSLRISRGEIFLALRDLSSKLVVEESQELA------------LKDDL----------PLLDRIISHIDQFFIRHQ 140 (406)
T ss_dssp TTCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC------------SSCSS----------CHHHHHHHHHHHHHHHTG
T ss_pred CccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC------------CCCHH----------HHHHHHHHHHHHHHHhcC
Confidence 35689999999999999999999999998777652 23566 7888888888876543
Q ss_pred CCCCCEeEEEeccCceeeEEecCCCcccc-c-CC-CCC-CCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKGSATIL-S-SL-DPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~-~~~-~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
.+..+|.+|||+..+ ++|.+.+.+. + ++ +|+ .++.+.|++.|+ .|+.+.||.++..++|.+.
T Consensus 141 ~~~~~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaalaE~~~ 206 (406)
T 1z6r_A 141 KKLERLTSIAITLPG----IIDTENGIVHRMPFYEDVKEMPLGEALEQHTG-VPVYIQHDISAWTMAEALF 206 (406)
T ss_dssp GGCCCEEEEEEEESS----EEETTTTEEEECTTCTTCSSBCHHHHHHHHHS-SCEEEEEHHHHHHHHHHHH
T ss_pred CCcCceeEEEEEeec----CEeCCCCEEecCCCCCCccCCCHHHHHHHHHC-CCEEEechhHHHHHHHHHh
Confidence 345689999999754 4476543332 2 34 564 588888888887 4899999999999888765
No 22
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.92 E-value=9.6e-10 Score=100.58 Aligned_cols=123 Identities=15% Similarity=0.023 Sum_probs=86.3
Q ss_pred CCCCCCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHH
Q 022949 2 EDYSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQK 81 (289)
Q Consensus 2 ~~~~~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~ 81 (289)
+-..+.+..|+||||+|+|++|++++|.+|+++.+.+.+++ ++++ ++++.+.+.+++
T Consensus 22 ~~l~~~~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~ 78 (343)
T 2yhw_A 22 ENLYFQGTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP-------------KTYE----------ERINLILQMCVE 78 (343)
T ss_dssp ------CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEECC-------------SSHH----------HHHHHHHHHHHH
T ss_pred hheEeCCCcEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC-------------CCHH----------HHHHHHHHHHHH
Confidence 44556667899999999999999999999999987766542 1233 677777777776
Q ss_pred HHhc--CCCCCEeEEEeccCceeeEEecCCCc-ccccC-C--CCC-CCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 82 LSKS--LDLSKVTAVSGSGQQHGSVYWKKGSA-TILSS-L--DPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 82 l~~~--~~~~~I~aIgis~~~~~~v~~d~~g~-~~~~~-~--~~~-~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
+.+. ....+|.+|||+..+ ++|.+.+ .+.++ + +|. .++.+.|++.|+ .|+.+.||.++..++|.+.
T Consensus 79 ~~~~~~~~~~~i~gigi~~pG----~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaal~E~~~ 151 (343)
T 2yhw_A 79 AAAEAVKLNCRILGVGISTGG----RVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH-LPVWVDNDGNCAALAERKF 151 (343)
T ss_dssp HHHHHHHTTEEEEEEEEEESS----EEETTTTEEEECCTTSSSCSSEECHHHHHHHHC-SCEEEEEHHHHHHHHHHHT
T ss_pred HHHhcccccCceEEEEEeccc----CEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC-CCEEEechhHHHHHHHHHh
Confidence 5432 234579999999855 4476543 33222 3 553 578888888887 4899999999999888764
No 23
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.84 E-value=4.4e-09 Score=95.40 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=89.1
Q ss_pred CCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 6 LPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 6 ~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
.++..|+||||+|+|++|++++|.+|+++.+.+.+++ ...+++ .+++.+.+.++++.+
T Consensus 15 ~~~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-----------~~~~~~----------~~~~~i~~~i~~~~~- 72 (321)
T 3r8e_A 15 LYFQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-----------DWVNGI----------GFVESMKLEIGNFLK- 72 (321)
T ss_dssp ----CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-----------HHHTTT----------CHHHHHHHHHHHHHH-
T ss_pred hccCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-----------CCCCHH----------HHHHHHHHHHHHHHh-
Confidence 3456799999999999999999999999998887764 124566 788888888877654
Q ss_pred CCCCCEeEEEeccCceeeEEecCC-Cccccc-CCC-C-CCCccccccccC-CCCCCCeeccCCcHHHHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKG-SATILS-SLD-P-KKPLVDQLGDAF-STKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~-~~~-~-~~~l~~~l~~~~-~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
...+|.+|||+.. + ++|.+ |..+.+ ++. | +.++.+.|++.| + .|+.+-||.++..++|.+..
T Consensus 73 -~~~~i~gigi~~p--G--~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~-~pV~v~NDa~aaalaE~~~g 139 (321)
T 3r8e_A 73 -QYPIVKGVGIGWP--G--LVSLDRTKVILLPNIPSVVNVPIVEILRSEFPH-IHFKIENDAKCAALGEYYFG 139 (321)
T ss_dssp -HCTTCCEEEEEES--S--EECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT-SEEEEEEHHHHHHHHHHHHS
T ss_pred -ccCCeeEEEEEec--c--cEECCCCEEEeCCCCccccCCCHHHHHHHHcCC-CCEEEEchHHHHHHHHHHhC
Confidence 2457889999874 4 44754 443323 344 5 468888899888 7 48899999999999888763
No 24
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.82 E-value=3.3e-09 Score=96.25 Aligned_cols=113 Identities=20% Similarity=0.188 Sum_probs=88.0
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (289)
+|+||||+|+|++|++++|.+|+++.+.+.+++ .+++ .+++.+.+.++++.+. .
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~-------------~~~~----------~~~~~i~~~i~~~~~~---~ 55 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATP-------------PTAE----------GIVDAICAAVAGASEG---H 55 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEECC-------------SSHH----------HHHHHHHHHHHHHHTT---C
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeCC-------------CCHH----------HHHHHHHHHHHHHHhh---c
Confidence 589999999999999999999999987776542 2344 8888888888887642 4
Q ss_pred CEeEEEeccCceeeEEecCCCccccc--CCCC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 90 KVTAVSGSGQQHGSVYWKKGSATILS--SLDP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 90 ~I~aIgis~~~~~~v~~d~~g~~~~~--~~~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
+|.+|||+..+ ++|.+.+.+.. +++| +.+|.+.|++.|++ |+.+.||.++..++|.+..
T Consensus 56 ~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~-pv~v~NDa~aaal~E~~~g 117 (321)
T 3vgl_A 56 DVEAVGIGAAG----YVDDKRATVLFAPNIDWRHEPLKDKVEQRVGL-PVVVENDANAAAWGEYRFG 117 (321)
T ss_dssp CEEEEEEEESS----EECTTSSCEEECSSSCCEEECHHHHHHHHHCS-CEEEEEHHHHHHHHHHHHS
T ss_pred CceEEEEeccc----cEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCC-CEEEEehhhhHHHHHHHhC
Confidence 79999999744 45876554432 3566 35888889988884 8999999999999887763
No 25
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.81 E-value=6.3e-09 Score=98.14 Aligned_cols=118 Identities=13% Similarity=0.084 Sum_probs=90.1
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-- 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 85 (289)
+..|+||||+|+|++|++++|.+|+++.+.+.+++ .++++ ++++.+.++++.+.+.
T Consensus 106 ~~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~l~~~i~~~~~~~~ 163 (429)
T 1z05_A 106 LGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH------------EIDQD----------DVLARLLFEIEEFFQTYA 163 (429)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTSCEEEEEEEECC------------CCBHH----------HHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC------------CCCHH----------HHHHHHHHHHHHHHHhcC
Confidence 34689999999999999999999999998777653 12344 8888888888886543
Q ss_pred CCCCCEeEEEeccCceeeEEecCCCcccc-c-CCCCC-CCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKGSATIL-S-SLDPK-KPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~~~~-~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
.+..+|.+|||+..+ ++|.+.+.+. + +++|. .++.+.|+..|+ .|+.+-||.++...+|.+.
T Consensus 164 ~~~~~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~-~pV~v~NDa~aaalaE~~~ 228 (429)
T 1z05_A 164 AQLDRVTSIAITLPG----LVNSEQGIVLQMPHYNVKNLALGPEIYKATG-LPVFVANDTRAWALAEKLF 228 (429)
T ss_dssp TTCCEEEEEEEEESS----EEETTTTEEEECSSSBCSSBCHHHHHHHHHC-SCEEEEEHHHHHHHHHHHH
T ss_pred CCcCceEEEEEeccC----cEeCCCCeEeecCCCCCCCCCHHHHHHHHhC-CCEEEechhHHHHHHHHHh
Confidence 445679999999754 4576544332 2 35564 588888888887 4899999999999888775
No 26
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.80 E-value=5.2e-09 Score=95.29 Aligned_cols=121 Identities=14% Similarity=0.238 Sum_probs=89.8
Q ss_pred CCCCCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHH
Q 022949 3 DYSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKL 82 (289)
Q Consensus 3 ~~~~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l 82 (289)
-|++..+.|+||||+|+|++|++++|.+|+++.+.+.+++. .+++ .+++.+.+.++++
T Consensus 17 ~l~~n~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~ 74 (327)
T 4db3_A 17 NLYFQSNAMYYGFDVGGTKIEFGAFNEKLERVATERVPTPT------------DDYP----------LLLETIAGLVAKY 74 (327)
T ss_dssp CTTSCCSCCEEEEEECSSEEEEEEECTTCCEEEEEEEECCT------------TCHH----------HHHHHHHHHHHHH
T ss_pred eEEECCCcEEEEEEECCCEEEEEEEeCCCcEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHH
Confidence 36676777999999999999999999999999988776541 1344 7888888888776
Q ss_pred HhcCCCCCEeEEEeccCceeeEEecCC-CcccccCCCC--CCCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 83 SKSLDLSKVTAVSGSGQQHGSVYWKKG-SATILSSLDP--KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 83 ~~~~~~~~I~aIgis~~~~~~v~~d~~-g~~~~~~~~~--~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
.+. ...+.+|||+.. + ++|.+ |....+++.+ +.++.+.|++.|++ |+.+-||.++..++|.+.
T Consensus 75 ~~~--~~~~~gigi~~p--G--~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~-pV~v~NDa~aaalgE~~~ 140 (327)
T 4db3_A 75 DQE--FACEGKIGLGLP--G--MEDADDATVLTVNVPAAKGKPLRADLEAKIGR-SVKIENDANCFALSEAWD 140 (327)
T ss_dssp HHH--HTSCCEEEEEES--E--EECTTTCCEEESSSGGGTTSCHHHHHHHHHSS-CCEEEEHHHHHHHHHHTS
T ss_pred HHh--cCCccEEEEEee--c--cEeCCCCEEEcCCCccccCCCHHHHHHHHHCC-CEEEecchhHHHHHHHHh
Confidence 543 124778888874 4 45754 4432223433 45888889988884 889999999999888765
No 27
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.80 E-value=4.3e-09 Score=97.74 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=88.8
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--C
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 86 (289)
..|+||||+|+|++|++++|.+|+++.+.+.+++. +++++ .+++.+.+.++.+.+. .
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~-----------~~~~~----------~~~~~l~~~i~~~~~~~~~ 144 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPS-----------QSDRE----------ETLNVMYRIIDRAKDMMEK 144 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCS-----------SCCHH----------HHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEccCC-----------CCCHH----------HHHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999888776541 23455 7888888888776543 3
Q ss_pred CCCCEeEEEeccCceeeEEecCC-Cccccc-CCCC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 87 DLSKVTAVSGSGQQHGSVYWKKG-SATILS-SLDP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~-g~~~~~-~~~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
+..+|.+|||+..+ . +|.+ |....+ +++| +.++.+.|++.|++ |+.+-||.++...+|.+..
T Consensus 145 ~~~~i~gigi~~pG--~--vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~-pV~v~NDanaaalaE~~~g 209 (380)
T 2hoe_A 145 LGSKLSALTVAAPG--P--IDTERGIIIDPRNFPLSQIPLANLLKEKYGI-EVWVENDADMGAVGEKWYT 209 (380)
T ss_dssp TTCCCCEEEEEESS--C--EETTTTEECCCSSCTTBTSCHHHHHHHHHCS-EEEEEEHHHHHHHHHHHHT
T ss_pred CcCcEEEEEEEeec--c--EECCCCEEeccCCCCCcCCChHHHHHHHhCC-CEEEechHHHHHHHHHHhC
Confidence 45679999998744 3 4664 433222 3566 45888888888874 8999999999988887653
No 28
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.67 E-value=4.9e-09 Score=95.72 Aligned_cols=108 Identities=11% Similarity=0.174 Sum_probs=77.9
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--C
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--L 86 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 86 (289)
++|+||||+|+|++|++++|.+|+++.+.+.+.. ...+++++ ++++.+.++++++.+. .
T Consensus 5 ~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~---------~~~~~~~~----------~~~~~i~~~i~~~~~~~~~ 65 (347)
T 2ch5_A 5 AAIYGGVEGGGTRSEVLLVSEDGKILAEADGLST---------NHWLIGTD----------KCVERINEMVNRAKRKAGV 65 (347)
T ss_dssp SCEEEEEEECTTCEEEEEEETTSCEEEEEEECCC---------CHHHHCHH----------HHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC---------CcccCCHH----------HHHHHHHHHHHHHHHhcCC
Confidence 4599999999999999999999999987765321 01234555 8899999888876543 3
Q ss_pred CCC-CEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCC--CCCCCeeccCCcHHHH
Q 022949 87 DLS-KVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFS--TKESPVWMDSSTTAQC 148 (289)
Q Consensus 87 ~~~-~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~--l~~~i~w~D~Ra~~~~ 148 (289)
... +|.+|||+..+ .+ |.+... ++.+.|++.|+ ..|+.+.||.++...+
T Consensus 66 ~~~~~i~gigi~~pG--~v--d~~~~~---------~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 66 DPLVPLRSLGLSLSG--GD--QEDAGR---------ILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp CTTCCBSEEEEEETT--TT--CHHHHH---------HHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred CcccceeEEEEeccC--CC--chHHHH---------HHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 444 79999998754 32 433222 46666776664 2589999999998877
No 29
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.64 E-value=2.5e-08 Score=90.15 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=83.2
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
..|+||||+|+|++|++++|.+|+++.+.+.+++ +.+++ .+++.+.+.++++.+.. .
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~------------~~~~~----------~~~~~i~~~i~~~~~~~-~ 62 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA------------EVIAP----------GLVSGIGEMIDEQLRRF-N 62 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH------------HHHTT----------CHHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc------------cccHH----------HHHHHHHHHHHHHHHhc-C
Confidence 4689999999999999999999999998777653 12244 67777777777654321 2
Q ss_pred CCEeEEEeccCceeeEEecCCCcccc-c-CCCCC----CCccccccccCCCCCCCeeccCCcHHHHHHH
Q 022949 89 SKVTAVSGSGQQHGSVYWKKGSATIL-S-SLDPK----KPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~~~~----~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~ 151 (289)
.+|.+|||+.. +. +|.+.+.+. + ++.+. .+|.+.|++.|++ |+.+-||.++....+..
T Consensus 63 ~~i~gigi~~p--G~--vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~-pv~v~NDanaaa~~e~~ 126 (310)
T 3htv_A 63 ARCHGLVMGFP--AL--VSKDKRTIISTPNLPLTAADLYDLADKLENTLNC-PVEFSRDVNLQLSWDVV 126 (310)
T ss_dssp EEEEEEEEEES--SC--BCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTS-CEEEEEHHHHHHHHHHH
T ss_pred CCeeEEEEecc--cc--EeCCCCEEEeCCCCCCccccCccHHHHHHHHhCC-CEEEeeHHHHHHHHHHh
Confidence 36899999974 44 487655443 2 24442 5788889988884 88999999987765543
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.63 E-value=1.3e-08 Score=91.06 Aligned_cols=103 Identities=11% Similarity=0.005 Sum_probs=74.2
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
|+||||+|+|++|++++|.+|+++.+.+.+++ .+.+++++ .+++.+.+.++.+.+..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~---------~~~~~~~~----------~~~~~i~~~i~~~~~~~---- 59 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG---------NYHNVGLT----------RAIENIKEAVKIAAKGE---- 59 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC---------CHHHHCHH----------HHHHHHHHHHHHHHTSC----
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC---------CcccCCHH----------HHHHHHHHHHHHHHhcC----
Confidence 89999999999999999999999988766543 12234556 88899988888876431
Q ss_pred EeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHH
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~ 151 (289)
+.+|||+..+ . |.+.... ++.+.|++ |+ .|++++||.++...++..
T Consensus 60 ~~~igi~~~G--~---~~~~~~~--------~l~~~l~~-~~-~pv~v~ND~~aaa~~e~~ 105 (299)
T 2e2o_A 60 ADVVGMGVAG--L---DSKFDWE--------NFTPLASL-IA-PKVIIQHDGVIALFAETL 105 (299)
T ss_dssp CSEEEEEETT--C---CSHHHHH--------HHHHHHTT-SS-SEEEEEEHHHHHHHHHHT
T ss_pred CCEEEEEcCC--C---CchhHHH--------HHHHHHHh-CC-CCEEEeCcHHHHHhhccC
Confidence 5566666533 1 3222211 46677777 77 589999999998887654
No 31
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=98.63 E-value=4.8e-08 Score=87.98 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=78.0
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
++|++|||+|+|++|++++|.+|+++.+.+.+++ +++ ++++.+.+. +. .
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~--------------~~~----------~~l~~i~~~---~~----~ 50 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX--------------MPD----------ETIEXVIQY---FS----Q 50 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC--------------CHH----------HHHHHHHHH---HT----T
T ss_pred CcEEEEEEECcceeEEEEEECCCcEEEEEEecCC--------------ChH----------HHHHHHHHH---hc----c
Confidence 5789999999999999999999999988766542 122 444443332 22 2
Q ss_pred CCEeEEEeccCceeeEEecCC------CcccccC-CCC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 89 SKVTAVSGSGQQHGSVYWKKG------SATILSS-LDP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~------g~~~~~~-~~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
.+|.+|||+. ++.+ |.+ |....++ ++| +.||.+.|++.|++ |+.+-||.++..++|.+..
T Consensus 51 ~~i~gigi~~--pG~v--d~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~-pV~v~NDanaaalaE~~~G 118 (302)
T 3epq_A 51 FSLQAIGIGS--FGPV--DNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXI-PVGFSTDVNAAALGEFLFG 118 (302)
T ss_dssp SCCSEEEEEE--CSSE--ECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCS-CEEEEEHHHHHHHHHHHHS
T ss_pred CCceEEEEEe--ceee--ccccccccccEEecCCCCCccCCChHHHHHHHhCC-CEEEechhHHHHHHHHHhC
Confidence 3688999997 4544 554 3332222 456 46899999998884 8999999999999988763
No 32
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.57 E-value=5.5e-08 Score=87.23 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=79.2
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
..|+||||+|+|++|++++|.+|+++.+.+.+++. .+++ .+++.+.+.+ .+ .
T Consensus 3 ~m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~------------~~~~----------~~~~~i~~~~---~~---~ 54 (297)
T 4htl_A 3 AMKIAAFDIGGTALKMGVVLPHGEIILTKSAEISG------------SDGD----------QILAEMKVFL---AE---N 54 (297)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEECST------------TCHH----------HHHHHHHHHH---HT---C
T ss_pred ccEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHH---hh---c
Confidence 45899999999999999999999999988776431 1123 4444443332 22 3
Q ss_pred CCEeEEEeccCceeeEEecCCCccc-cc-CC-CC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 89 SKVTAVSGSGQQHGSVYWKKGSATI-LS-SL-DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~g~~~-~~-~~-~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
.+|.+|||+..+ ++|.+.+.+ .+ ++ +| +.+|.+.|++.|+ .|+.+-||.++..++|.+..
T Consensus 55 ~~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~-~pV~v~NDa~aaal~E~~~g 118 (297)
T 4htl_A 55 TDVTGIAVSAPG----YVNPKTGLITMGGAIRRFDNFNLKEWLEAETG-LPVAIENDANCALLAEKWLG 118 (297)
T ss_dssp TTCCEEEEEESS----EECTTTCEEEECTTCGGGTTEEHHHHHHHHHC-SCEEEEEHHHHHHHHHHHHS
T ss_pred CCeeEEEEecCc----ceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC-cCEEEecHHHHHHHHHHHhC
Confidence 478999999744 457654433 33 23 35 4578888888888 48889999999999887753
No 33
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.52 E-value=8.1e-08 Score=84.73 Aligned_cols=119 Identities=13% Similarity=0.134 Sum_probs=80.1
Q ss_pred CCceEEEEEcCCCceEEEEEcCC-CCEEEE-EEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSN-LNIVAS-EQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~-G~il~~-~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
+..|+||||+|+|++|++++|.+ |+++.. .+.+++ ...+++ .+.+.+.+.++.+.+.
T Consensus 10 ~~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~-----------~~~~~~----------~~~~~i~~~i~~~~~~ 68 (267)
T 1woq_A 10 KNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP-----------QPATPE----------SVAEAVALVVAELSAR 68 (267)
T ss_dssp -CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC-----------SSCCHH----------HHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC-----------ccCCHH----------HHHHHHHHHHHHHHHh
Confidence 34579999999999999999987 777743 233332 012334 7788888888877643
Q ss_pred -CCCCCEeEEEeccCceeeEEecCCCccccc-CC--CC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 86 -LDLSKVTAVSGSGQQHGSVYWKKGSATILS-SL--DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 86 -~~~~~I~aIgis~~~~~~v~~d~~g~~~~~-~~--~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
.....+.+|||+. ++.+ | +|..+.+ ++ +| +.+|.+.|++.|+ .|+.+-||.++...+|.+..
T Consensus 69 ~~~~~~~~~igi~~--pG~v--~-~g~v~~~~~l~~~w~~~~l~~~l~~~~~-~pV~v~NDanaaalaE~~~g 135 (267)
T 1woq_A 69 PEAPAAGSPVGVTF--PGII--Q-HGVVHSAANVDKSWLNTDIDALLTARLG-RPVEVINDADAAGLAEARYG 135 (267)
T ss_dssp TTCCCTTCCEEEEE--SSCE--E-TTEECCCTTSCGGGTTCBHHHHHHHHHT-SCEEEEEHHHHHHHHHHHHS
T ss_pred ccccCccceEEEEc--cceE--c-CCEEEeCCCCCCCCCCCCHHHHHHHHHC-CCEEEeehhHHHHHHHHHhC
Confidence 1113345677776 4444 5 5554332 34 35 4688888988888 48999999999998887653
No 34
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.51 E-value=1.1e-07 Score=86.23 Aligned_cols=120 Identities=14% Similarity=0.220 Sum_probs=81.7
Q ss_pred CCCCCCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHH
Q 022949 4 YSLPKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (289)
Q Consensus 4 ~~~~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (289)
|++..+.++||||+|+|++|++++|.+|+++.+.+.+++. .+++ .+.+.+.+.++++.
T Consensus 18 l~~~~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~ 75 (327)
T 2ap1_A 18 LYFQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH------------TSYS----------AFLDAVCELVEEAD 75 (327)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC------------SCHH----------HHHHHHHHHHHHHH
T ss_pred EEEcCCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC------------CCHH----------HHHHHHHHHHHHHH
Confidence 5666778999999999999999999999999887776531 1233 67777777777665
Q ss_pred hcCCCCCEeEEEeccCceeeEEecCCCccccc-CC-CC-CCCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 84 KSLDLSKVTAVSGSGQQHGSVYWKKGSATILS-SL-DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 84 ~~~~~~~I~aIgis~~~~~~v~~d~~g~~~~~-~~-~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
.. ...+.+|||+.. +. +|.+.+.+.. ++ .+ +.+|.+.|+..|+ .|+.+-||.++...+|.+.
T Consensus 76 ~~--~~~i~~igi~~p--G~--vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~-~pv~v~NDa~aaalgE~~~ 140 (327)
T 2ap1_A 76 QR--FGVKGSVGIGIP--GM--PETEDGTLYAANVPAASGKPLRADLSARLD-RDVRLDNDANCFALSEAWD 140 (327)
T ss_dssp HH--HTSCCEEEEEES--SB--SCCTTSCCBCTTCTTTTTSCHHHHHHHHHT-SCEEEEEHHHHHHHHHHTS
T ss_pred Hh--cCCccEEEEEee--ee--EECCCCEEEccCCCccCCCChHHHHHHHHC-CCEEEecHHHHHHHHHHHh
Confidence 42 124777888763 33 4665443322 22 23 4578888888887 4888999999988887654
No 35
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.49 E-value=5e-08 Score=87.75 Aligned_cols=114 Identities=14% Similarity=0.118 Sum_probs=81.8
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
|+||||+|+|++|++++|.+ +++.+.+.+++. .+++ .+++.+.+.++++.+.. ..+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~-~~l~~~~~~~~~------------~~~~----------~~~~~i~~~i~~~~~~~-~~~ 57 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK-RLLSKVVVPTPK------------EGGE----------RVAEALAEAAERAEREA-GVR 57 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS-SBSCCEEEECCS------------SCHH----------HHHHHHHHHHHHHHHHH-TCC
T ss_pred EEEEEEEcCCEEEEEEEeCC-CcEEEEEEcCCC------------CChH----------HHHHHHHHHHHHHHhhc-cCC
Confidence 79999999999999999988 455555555431 1113 78888888887765431 356
Q ss_pred EeEEEeccCceeeEEecCCCcccc-c-CC-CC-CCCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATIL-S-SL-DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~-~-~~-~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
|.+|||+.. +. +|.+.+.+. + ++ +| +.++.+.|++.|+ .|+.+-||.++..++|.+..
T Consensus 58 i~gigi~~p--G~--vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~-~pv~v~NDa~aaal~E~~~g 119 (302)
T 3vov_A 58 GEAIGLGTP--GP--LDFRRGVIRFAPNIPGVQDFPIRRILEEATG-RPVFLENDANAAALAEHHLG 119 (302)
T ss_dssp CSSEEEEES--SC--EETTTTEEC---CCTTCTTCCHHHHHHHHHS-SCEEEEEHHHHHHHHHHHHS
T ss_pred ceEEEEEec--cc--EeCCCCEEEcCCCCCCcCCCChHHHHHHhhC-CCEEEEechHHHHHHHHHhC
Confidence 888888874 43 476544433 2 34 55 4688888998888 58999999999999887753
No 36
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=98.42 E-value=1.3e-07 Score=87.37 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=83.3
Q ss_pred CCCceEEEEEcCCCceEEEEEcCCCCEEEEE-EeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASE-QLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~-~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
++..|+||||+|+|++|++++| +|+++.+. +.+++. . +++ ++++.+.+.++.+.+.
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~~-----------~-~~~----------~~l~~i~~~~~~i~~~ 62 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPACA-----------D-CLD----------KCLGNLVEGFKAIQAG 62 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE-TTEECSCCEEEECCT-----------T-CHH----------HHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEEECcceEEEEEEE-CCEEEEEEEEEECCC-----------C-CHH----------HHHHHHHHHHHHHHHH
Confidence 4567999999999999999999 99998766 555431 1 444 7777776633333332
Q ss_pred CCCCCEeEEEeccCceeeEEecCCCcccc-c-CC-CCC--CCccccccccCCCCCCCeeccCCcHHHHHHHHH
Q 022949 86 LDLSKVTAVSGSGQQHGSVYWKKGSATIL-S-SL-DPK--KPLVDQLGDAFSTKESPVWMDSSTTAQCREIEK 153 (289)
Q Consensus 86 ~~~~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~-~~~--~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~~ 153 (289)
.. .+|.+|||+. ++.| |.+.+.+. + ++ +|. .+|.+.|++.|++ |+.+-||.++..++|.+..
T Consensus 63 ~~-~~i~gIGIav--PG~V--d~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~-PV~veNDanaaAlgE~~~G 129 (366)
T 3mcp_A 63 LP-EAPVAISFAF--PGPA--DYQAGIIGDLPNFPSFRGGVALGPFLEDIFGI-PVFINNDGSLFAYGEALTG 129 (366)
T ss_dssp CS-SCCCEEEEEC--CSSE--ETTTTEECCCTTCGGGTTCBCHHHHHHHHHCS-CEEEECHHHHHHHHHHHTS
T ss_pred hh-cCCeEEEEEe--cceE--eCCCCEEEeCCCcccccCCCCHHHHHHHHHCC-CEEEechhhHHHHHHHHhC
Confidence 22 5799999997 4544 76544332 2 34 554 5888889988884 8889999999998887653
No 37
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=98.38 E-value=6.4e-07 Score=79.71 Aligned_cols=107 Identities=11% Similarity=0.081 Sum_probs=74.9
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
.+++||||+|+|++|++++|.+|+++.+.+.+++ .+++ .+.+.+.+.+++
T Consensus 3 ~m~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------------~~~~----------~~~~~i~~~i~~------- 52 (292)
T 2gup_A 3 AMTIATIDIGGTGIKFASLTPDGKILDKTSISTP-------------ENLE----------DLLAWLDQRLSE------- 52 (292)
T ss_dssp -CCEEEEEEETTEEEEEEECTTCCEEEEEEECCC-------------SSHH----------HHHHHHHHHHTT-------
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEEEEEEeCC-------------CCHH----------HHHHHHHHHHHh-------
Confidence 4469999999999999999999999987766432 1222 555554444332
Q ss_pred CCEeEEEeccCceeeEEecCCCcccc-c-CCC-C-CCCccccccccCCCCCCCeeccCCcHHHHHHH
Q 022949 89 SKVTAVSGSGQQHGSVYWKKGSATIL-S-SLD-P-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v~~d~~g~~~~-~-~~~-~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~ 151 (289)
.++.+|||+.. + ++|.+.+.+. + ++. + +.++.+.| +.|+ .|+.+-||.++...+|.+
T Consensus 53 ~~i~gigi~~p--G--~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~-~pv~v~NDa~aaa~~e~~ 113 (292)
T 2gup_A 53 QDYSGIAMSVP--G--AVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ-LPVHLENDANCVGLSELL 113 (292)
T ss_dssp SCCSEEEEEES--S--EECTTTCBEESCCSSGGGSSSBHHHHT-GGGC-CCEEEEEHHHHHHHHHHH
T ss_pred CCCcEEEEEec--C--cccCCCCEEEecCCCCcccCCCHHHHH-HHcC-CCEEEechHHHHHHHHHH
Confidence 46888998874 4 3476543332 2 233 3 56888888 8887 489999999999888876
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.31 E-value=1e-06 Score=78.05 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=50.8
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh-cCCC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK-SLDL 88 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 88 (289)
+|+||||+|+|++|++++|++|+++...+.+++. ||. + ++.++++++.+ ....
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~i~~~~~~~~~~-------------~~~----------~---~~~~~l~~l~~~~~~~ 56 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVAKSLVAVGT-------------GTS----------G---PARSISEVLENAHMKK 56 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCS-------------SCC----------H---HHHHHHHHHHHHTCCG
T ss_pred cEEEEEEeccceEEEEEEeCCCCEEEEEEecCCC-------------CHH----------H---HHHHHHHHHHHcCCCh
Confidence 5899999999999999999999999988776531 333 2 34445555543 2344
Q ss_pred CCEeEEEeccCceeeE
Q 022949 89 SKVTAVSGSGQQHGSV 104 (289)
Q Consensus 89 ~~I~aIgis~~~~~~v 104 (289)
.+|.+|++++++..++
T Consensus 57 ~~i~~i~~TG~g~~~~ 72 (270)
T 1hux_A 57 EDMAFTLATGYGRNSL 72 (270)
T ss_dssp GGCSEEEEESTTTTTT
T ss_pred hHEEEEEEeCccccch
Confidence 5788999999887655
No 39
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=98.28 E-value=1.8e-07 Score=83.53 Aligned_cols=104 Identities=16% Similarity=0.015 Sum_probs=70.0
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
++||||+|+|++|++++| +|+++.+.+.+... + ...+++ .+++.+.+.++.+.. .+..+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~--~-------~~~~~~----------~~~~~i~~~i~~~~~-~~~~~ 59 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN--P-------FQQDRN----------EIDTALRSEVLPAIG-QKASS 59 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC--T-------TTSCHH----------HHHHHHTTTTHHHHT-TSTTT
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC--c-------ccCCHH----------HHHHHHHHHHHHHhC-CCccc
Confidence 479999999999999999 99999887664310 0 011333 677777666665432 13356
Q ss_pred EeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCC-CCCCeeccCCcHHHHH
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFST-KESPVWMDSSTTAQCR 149 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l-~~~i~w~D~Ra~~~~~ 149 (289)
|.+|||+..+ .+ .+.+. ++.+.|+..|+. .|+.+-||.++....+
T Consensus 60 i~~igig~pG--~~--~~~~~----------~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 60 IRAVYFYGAG--CT--PAKAP----------MLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp CCEEEEEETT--CC--TTTHH----------HHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred ccEEEEECCC--CC--hHHHH----------HHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 8888888744 33 33333 366667766654 4888889999887765
No 40
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.27 E-value=5.7e-07 Score=79.89 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=76.6
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
++||||+|+|++|++++|.+|+++.+.+.+++. ..+++ ++.+.+.+.++.+.+ +
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~-----------~~~~~----------~~~~~i~~~i~~~~~-----~ 55 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA-----------SQTPE----------ALRDALSALVSPLQA-----H 55 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS-----------SCCHH----------HHHHHHHHHHTTTGG-----G
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC-----------CCCHH----------HHHHHHHHHHHHHHh-----h
Confidence 689999999999999999999999888776541 11233 666666666655432 2
Q ss_pred EeEEEeccCceeeEEecCCCcccc-c-CC-CC-CCCccccccccCCCCCCCeeccCCcHHHHHHHH
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATIL-S-SL-DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCREIE 152 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~-~-~~-~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~~ 152 (289)
+.+|||+. ++ ++|.+...+. + ++ +| +.+|.+.|++.|++ |+.+-||.++...+|.+.
T Consensus 56 ~~~igi~~--pG--~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~-pv~v~NDa~aaa~~e~~~ 116 (289)
T 2aa4_A 56 AQRVAIAS--TG--IIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNL-PTIAINDAQAAAWAEFQA 116 (289)
T ss_dssp CSEEEEEE--SS--EEETTEEECSSGGGGGGGTTCCHHHHHHHHHCS-CEEEEEHHHHHHHHHHHT
T ss_pred CCEEEEEe--cc--ceeCCCCEEEeCCCCCcccCCChHHHHHHHHCC-CEEEechHHHHHHHHHHh
Confidence 33566665 33 3466544322 2 23 34 45788888888874 888999999988887665
No 41
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=98.20 E-value=1.6e-07 Score=83.80 Aligned_cols=103 Identities=16% Similarity=0.051 Sum_probs=57.9
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
|+||||+|+|++|++++| +|+++.+.+.+... +. ..+++ .+++.+.+.++++. ...+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~--~~-------~~~~~----------~~~~~i~~~i~~~~---~~~~ 57 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGIN--PF-------FQSEE----------EIQQKLTASLLPQL---PEGK 57 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCC--TT-------TSCST----------TTTTTTTC-------------
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCC--cc-------cCCHH----------HHHHHHHHHHHHhc---Cccc
Confidence 479999999999999999 99999887654311 10 11222 33344444444332 1245
Q ss_pred EeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCC-CCCCeeccCCcHHHHHH
Q 022949 91 VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFST-KESPVWMDSSTTAQCRE 150 (289)
Q Consensus 91 I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l-~~~i~w~D~Ra~~~~~~ 150 (289)
|.+|||+..+ ++ .+.+. ++.+.|+..|+. .|+.+-||.++....|.
T Consensus 58 i~~igig~pG--~~--~~~~~----------~l~~~l~~~~~~~~pv~v~NDa~~aalge~ 104 (291)
T 1zxo_A 58 FNAVYFYGAG--CT--PEKAP----------VLRRAIADSLPVIGNIKANSDMLAAAHGLC 104 (291)
T ss_dssp ---CEEECTT--CC--TTTTH----------HHHHHHHHHSCCCSCCEEECSHHHHHHHTT
T ss_pred ccEEEEEcCC--CC--HHHHH----------HHHHHHHHhcCCCceEEEECcHHHHHHhhc
Confidence 7788888744 33 33333 366677777764 48889999998877663
No 42
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.16 E-value=4.3e-06 Score=74.96 Aligned_cols=103 Identities=13% Similarity=0.025 Sum_probs=67.3
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--CC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (289)
+|+||||+|+|++|++++|.+|+++.+.+.+.. . ..++++ ++++.+.++++++.+. .+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~----~------~~~~~~----------~~~~~l~~~i~~~l~~~~~~ 70 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS----A------LSQGIA----------KSWQAVLSTLEAAFQQAGLP 70 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCC----C------GGGCHH----------HHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC----C------cccCHH----------HHHHHHHHHHHHHHHhcCCC
Confidence 599999999999999999999999987755321 0 123455 8899998888886543 44
Q ss_pred CCCE--eEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCC-CCCCCeeccCCcHHHHH
Q 022949 88 LSKV--TAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFS-TKESPVWMDSSTTAQCR 149 (289)
Q Consensus 88 ~~~I--~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~-l~~~i~w~D~Ra~~~~~ 149 (289)
..+| .+|||+.. +. +|.+... . |+..|. -.|+.+-||.++....+
T Consensus 71 ~~~i~~~~igig~p--G~--v~~~~~~---------~----l~~~~~~~~pv~v~NDa~aaa~ge 118 (305)
T 1zc6_A 71 AAPASACAIGLGLS--GV--HNRQWAG---------E----FESQAPGFARLSLATDGYTTLLGA 118 (305)
T ss_dssp CCCGGGEEEEEEES--CC--CTTSHHH---------H----HHHTCCCCSEEEEECHHHHHHHHH
T ss_pred hhhhccceEEEEec--CC--CchHHHH---------H----HHHhCCCCceEEEECCHHHHHHhh
Confidence 4566 67777653 33 3544211 0 111120 03677778888766554
No 43
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=98.14 E-value=1.8e-06 Score=78.47 Aligned_cols=109 Identities=7% Similarity=-0.017 Sum_probs=70.4
Q ss_pred CCceEEEEEcCCCceEEEEEc-CCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcC
Q 022949 8 KDSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSL 86 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d-~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (289)
+..|+||||+|+|++|++++| .+|+++.+.+.++. +.+ .+.+.+.+.++..
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~--------------~~~----------~~~~~i~~~~~~~---- 63 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYSGL--------------DYP----------SLEAVIRVYLEEH---- 63 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG--------------GCS----------CHHHHHHHHHHHS----
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEEecCC--------------CcC----------CHHHHHHHHHHhc----
Confidence 467999999999999999999 58999876554432 111 2333444433321
Q ss_pred CCCCEeEEEeccCceeeEEecCCCcccccCCCCCCCccccccccCCCCCCCeeccCCcHHHHHHH
Q 022949 87 DLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREI 151 (289)
Q Consensus 87 ~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~~ 151 (289)
..+|.+|||+.. +.| |. +.....+++|..+ .+.|++.|++.++.+-||.++..++|.+
T Consensus 64 -~~~i~gigi~~p--G~v--d~-~~~~~~nl~w~~~-~~~l~~~~~~p~V~v~NDanaaalgE~~ 121 (332)
T 1sz2_A 64 -KVEVKDGCIAIA--CPI--TG-DWVAMTNHTWAFS-IAEMKKNLGFSHLEIINDFTAVSMAIPM 121 (332)
T ss_dssp -CCCCCEEEEEES--SCC--CS-SEECCSSSCCCEE-HHHHHHHHTCSEEEEEEHHHHHHHHGGG
T ss_pred -CCCccEEEEEEe--Cce--eC-CEEeeeCCCCcCC-HHHHHHHhCCCcEEEEeCHhHHhccccc
Confidence 136888888874 433 53 3322234555555 5677777875348999999999888765
No 44
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=98.07 E-value=3.2e-06 Score=80.27 Aligned_cols=121 Identities=10% Similarity=-0.024 Sum_probs=78.0
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCE---EEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~i---l~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
...|||||+|+|++|++++|.+|++ +.....++| .+ -...+++ ++++.+.++++.+.+.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip----~~----~~~~~~~----------~lfd~Ia~~i~~~~~~ 121 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAA----AM----STTAIPS----------DLWGNXAXSNAAFSSX 121 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCT----TT----TSCSCTH----------HHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcC----Cc----cCCCCHH----------HHHHHHHHHHHHHHhh
Confidence 4588999999999999999999998 444444433 11 0112344 8899999999886542
Q ss_pred --CC--CCCEeEEEeccCceeeEEecCCCcccc--c-CC---CCCCCccccccccC---CCCC---CCeeccCCcHHHHH
Q 022949 86 --LD--LSKVTAVSGSGQQHGSVYWKKGSATIL--S-SL---DPKKPLVDQLGDAF---STKE---SPVWMDSSTTAQCR 149 (289)
Q Consensus 86 --~~--~~~I~aIgis~~~~~~v~~d~~g~~~~--~-~~---~~~~~l~~~l~~~~---~l~~---~i~w~D~Ra~~~~~ 149 (289)
.. ...+.|||++..+.. + +-+...+. . .+ ++. +|++.|++.+ ++ | +.+-||..+....+
T Consensus 122 ~~~~~~~~~~lGi~fs~P~~q-~--~~~~g~l~~wtKgf~i~~~~-~v~~~L~~~l~r~gl-pv~vval~NDa~~tll~e 196 (457)
T 2yhx_A 122 EFSSXAGSVPLGFTFXEAGAK-E--XVIKGQITXQAXAFSLAXLX-KLISAMXNAXFPAGD-XXXSVADIXDSHGILXXV 196 (457)
T ss_dssp HTSSCSSCEEEEEECCSCCCC-S--BTTCCBCSSCCTTCCCSSCS-SBHHHHHHHHHHHHC-CEEEEEEECHHHHHHHHH
T ss_pred cccccccccceeeEEEEEEEE-e--ecCceEEEeeccCCCcchhH-HHHHHHHHhHhhcCC-cceeEEEEecchhhccch
Confidence 11 122567777775430 1 22212211 0 11 123 7888888877 64 7 77889999999888
Q ss_pred HHH
Q 022949 150 EIE 152 (289)
Q Consensus 150 ~~~ 152 (289)
.++
T Consensus 197 ~~~ 199 (457)
T 2yhx_A 197 NYT 199 (457)
T ss_dssp HHH
T ss_pred hhc
Confidence 884
No 45
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=98.07 E-value=3e-06 Score=78.18 Aligned_cols=112 Identities=15% Similarity=0.068 Sum_probs=76.7
Q ss_pred CceEEEEEcCCCceEEEEEcC----CCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 9 DSLFLGFDSSTQSLKATVLDS----NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~----~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
..|+||||+|+|++|++++|. +|+++.+.+. ++. .+++ .+.+.+.+.++.+..
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~------------~~~~----------~~~~~i~~~i~~~~~ 84 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR------------KDIT----------EIIEFFNEIIELMPA 84 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT------------CBGG----------GHHHHHHHHHHHSCH
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC------------CCHH----------HHHHHHHHHHHHHhh
Confidence 468999999999999999998 8998876652 121 1233 667777777665432
Q ss_pred cCCCCCEeEEEeccCceeeEEecCCCcccccCCCCC--CCccccccccCCCCCCCeeccCCcHHHHH
Q 022949 85 SLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPK--KPLVDQLGDAFSTKESPVWMDSSTTAQCR 149 (289)
Q Consensus 85 ~~~~~~I~aIgis~~~~~~v~~d~~g~~~~~~~~~~--~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~ 149 (289)
. ...+|.+|||+.. +. +|. |....+..+++ .++.+.++..|++.|+.+-||.++..+++
T Consensus 85 ~-~~~~i~gigi~~p--G~--vd~-g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaalge 145 (373)
T 2q2r_A 85 S-VMKRVKAGVINVP--GP--VTG-GAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFGV 145 (373)
T ss_dssp H-HHTTEEEEEEEES--SC--EET-TTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHHH
T ss_pred c-ccccccEEEEEee--cc--ccC-CEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhccc
Confidence 1 1246889999874 43 365 54431123443 27887888878765899999999988874
No 46
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=97.86 E-value=5e-06 Score=71.69 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=60.4
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCC
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLD 87 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 87 (289)
++.+++|||+|+|++| ++|.+|++ ..+.+++ . ..+++ .+.+.+.+. .+.
T Consensus 4 ~~~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~----~-------~~~~~----------~~~~~i~~~----i~~-- 52 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVK--IGLSTDGE--ERKVESG----K-------TMTGP----------EMVAAVTAM----AKD-- 52 (226)
T ss_dssp GGCCEEEEEECSSEEE--EEETTTCC--EEEEECC----T-------TCCHH----------HHHHHHHHH----TTT--
T ss_pred cCCEEEEEEECCCEEE--EEECCCCE--EEEEECC----C-------CCCHH----------HHHHHHHHH----HHh--
Confidence 4568999999999999 57888886 2333332 1 12233 444444333 221
Q ss_pred CCCEeEEEeccCceeeEEecCCCccccc-CC--CC-CCCccccccccCCCCCCCeeccCCcHHHHHH
Q 022949 88 LSKVTAVSGSGQQHGSVYWKKGSATILS-SL--DP-KKPLVDQLGDAFSTKESPVWMDSSTTAQCRE 150 (289)
Q Consensus 88 ~~~I~aIgis~~~~~~v~~d~~g~~~~~-~~--~~-~~~l~~~l~~~~~l~~~i~w~D~Ra~~~~~~ 150 (289)
.++.+|||+. ++.| |.++....+ ++ +| +.+|. +.|+ .|+.+-||.++..++|.
T Consensus 53 -~~i~gigi~~--pG~V--d~~~~~~~~~nl~~~w~~~~l~----~~~~-~pv~v~NDanaaalge~ 109 (226)
T 3lm2_A 53 -MTYDVIAMGY--PGPV--VHNKPLREPVNLGEGWVGYDYE----GAFG-RPVRIVNDALMQAIGSY 109 (226)
T ss_dssp -CCCSEEEEEE--SSCE--ETTEECSCCTTSCSCCTTCCHH----HHHT-SCEEEEEHHHHHHHHHC
T ss_pred -CCCCEEEEEE--EeEE--ECCeEEEECCcCCccccCCchH----HhcC-CeEEEEEHHHHHHHHHh
Confidence 2688899987 4544 665433222 34 44 33553 3455 47888888887776554
No 47
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=97.54 E-value=4.7e-05 Score=78.18 Aligned_cols=123 Identities=15% Similarity=0.083 Sum_probs=75.6
Q ss_pred CceEEEEEcCCCceEEEEEcCCCC----E-EEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHH
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLN----I-VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLS 83 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~----i-l~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (289)
...+||||+|+|++|++++|.+|+ + +...+.++| .+ ....+++ ++++.+.++++.+.
T Consensus 77 ~G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip----~~----~~~~~~~----------~lf~~Ia~~i~~~l 138 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTP----EN----IVHGSGS----------QLFDHVAECLGDFM 138 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCC----HH----HHSSBHH----------HHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECC----cc----cccCCHH----------HHHHHHHHHHHHHH
Confidence 368899999999999999998876 4 444444443 11 0111233 88899999988865
Q ss_pred hc--CCCCC-EeEEEeccCceeeEEecCCCccccc---C--C-CC-CCCccccccccCC----C--CCCCeeccCCcHHH
Q 022949 84 KS--LDLSK-VTAVSGSGQQHGSVYWKKGSATILS---S--L-DP-KKPLVDQLGDAFS----T--KESPVWMDSSTTAQ 147 (289)
Q Consensus 84 ~~--~~~~~-I~aIgis~~~~~~v~~d~~g~~~~~---~--~-~~-~~~l~~~l~~~~~----l--~~~i~w~D~Ra~~~ 147 (289)
+. ..... ..||+++....- .+.+.+.++. . + ++ ..++++.|++.+. + .++.+-||..+...
T Consensus 139 ~~~~~~~~~~~lGi~fs~P~~q---~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll 215 (917)
T 1cza_N 139 EKRKIKDKKLPVGFTFSFPCQQ---SKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMM 215 (917)
T ss_dssp HHHTCTTSCCCEEEEECSCEEC---SSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHH
T ss_pred HhcCCCCCcccEEEEEcccccc---CcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHH
Confidence 42 22222 567777764320 1212222221 1 2 22 3477777877652 2 35778899999998
Q ss_pred HHHHH
Q 022949 148 CREIE 152 (289)
Q Consensus 148 ~~~~~ 152 (289)
.+.+.
T Consensus 216 ~e~~~ 220 (917)
T 1cza_N 216 TCGYD 220 (917)
T ss_dssp HHHHH
T ss_pred Hhhcc
Confidence 88776
No 48
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.47 E-value=0.00029 Score=61.81 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=26.7
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEe
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~ 39 (289)
+|+||||+|||++|++++|++++++.....
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~~~~~ 30 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVASETI 30 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEEEEEe
Confidence 479999999999999999999999876554
No 49
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.43 E-value=2.3e-05 Score=72.70 Aligned_cols=32 Identities=13% Similarity=0.287 Sum_probs=27.5
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecc
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~ 42 (289)
+++||||+|+|++|++|+|.+ +++.+.+.+++
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~ 33 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHS 33 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECC
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccC
Confidence 378999999999999999976 88888777653
No 50
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=97.24 E-value=0.00023 Score=67.38 Aligned_cols=120 Identities=12% Similarity=0.051 Sum_probs=68.9
Q ss_pred CceEEEEEcCCCceEEEEEcCCC-CE---EEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNL-NI---VASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G-~i---l~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
...|+|||+|+||+|+++++.+| +- +.....+.| .+- ...+++ ++++.+.++++.+.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip----~~~----~~~~~~----------~lfd~Ia~~i~~~l~ 128 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIP----AEK----MSGSGT----------ELFKYIAETLADFLE 128 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCC----TTT----TTSBHH----------HHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecC----Ccc----cCCCHH----------HHHHHHHHHHHHHHH
Confidence 46899999999999999999988 51 112222222 110 111223 889999999988654
Q ss_pred c--CCCCCEeEEEeccCceeeEEecC---CCccccc-----CC-CC-CCCccccccccC---CCCCC---CeeccCCcHH
Q 022949 85 S--LDLSKVTAVSGSGQQHGSVYWKK---GSATILS-----SL-DP-KKPLVDQLGDAF---STKES---PVWMDSSTTA 146 (289)
Q Consensus 85 ~--~~~~~I~aIgis~~~~~~v~~d~---~g~~~~~-----~~-~~-~~~l~~~l~~~~---~l~~~---i~w~D~Ra~~ 146 (289)
. ... +...|||+.-. +++. +.+.++. ++ ++ ..++++.|++.+ ++ |+ .+-||..+..
T Consensus 129 ~~~~~~-~~~~lG~tfsf----Pv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~l-~v~v~al~NDtv~tl 202 (451)
T 1bdg_A 129 NNGMKD-KKFDLGFTFSF----PCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKREL-NVKCVAVVNDTVGTL 202 (451)
T ss_dssp HTTCCS-SCEEEEEEECS----CEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTTC-CEEEEEEECHHHHHH
T ss_pred hcCCCc-cccceEEEEee----EeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcCC-CcceEEEEEchHHHH
Confidence 3 222 22445554321 1222 2122111 11 23 336777777766 53 55 6679998887
Q ss_pred HHHHHH
Q 022949 147 QCREIE 152 (289)
Q Consensus 147 ~~~~~~ 152 (289)
..+.+.
T Consensus 203 la~~y~ 208 (451)
T 1bdg_A 203 ASCALE 208 (451)
T ss_dssp HHHHTT
T ss_pred HHhccc
Confidence 776665
No 51
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.04 E-value=0.0023 Score=55.70 Aligned_cols=34 Identities=21% Similarity=0.057 Sum_probs=29.8
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeec
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQF 41 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~ 41 (289)
++++++|||+||+++|++++|.+++++.....+.
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~ 59 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTDQEGIPVAGALKWA 59 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEECTTCCEEEEEEEEC
T ss_pred CCCEEEEEEcccceEEEEEECCCCcEEEEEeecc
Confidence 3579999999999999999999999998876654
No 52
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.50 E-value=0.0034 Score=55.19 Aligned_cols=65 Identities=12% Similarity=0.035 Sum_probs=42.5
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSK 90 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (289)
++|+||+|.|++|.+++|. ++++...+.+++ . ...+ ++...+...++... .+..+
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~-~-----------~t~d----------e~~~~l~~ll~~~~--~~~~~ 57 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK-V-----------STSD----------ELGIFLKSVLRENN--CSPET 57 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS-C-----------CCHH----------HHHHHHHHHHHTTT--CCGGG
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC-C-----------CCHH----------HHHHHHHHHHHHcC--CChhh
Confidence 6899999999999999986 577777766653 1 1122 55444333332211 34457
Q ss_pred EeEEEeccCc
Q 022949 91 VTAVSGSGQQ 100 (289)
Q Consensus 91 I~aIgis~~~ 100 (289)
|.+|+||+..
T Consensus 58 I~~iiISSVv 67 (266)
T 3djc_A 58 IRKIAICSVV 67 (266)
T ss_dssp CCEEEEEESC
T ss_pred ceEEEEecch
Confidence 9999999854
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.42 E-value=0.0029 Score=55.06 Aligned_cols=64 Identities=9% Similarity=0.172 Sum_probs=42.4
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDL 88 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (289)
++++|+||+|.|++|.+++| +++++...+.+++. .+.++ ++...+...++. ..
T Consensus 2 ~~M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~-----------~~t~d----------e~~~~l~~l~~~-----~~ 54 (249)
T 3bex_A 2 DPMYLLVDVGNTHSVFSITE-DGKTFRRWRLSTGV-----------FQTED----------ELFSHLHPLLGD-----AM 54 (249)
T ss_dssp CCEEEEEEECSSEEEEEEES-SSSSCEEEEEECCT-----------TCCHH----------HHHHHHHHHHGG-----GG
T ss_pred CceEEEEEECCCeEEEEEEE-CCEEEEEEEecCCC-----------CCCHH----------HHHHHHHHHHhh-----cc
Confidence 45689999999999999998 56777766665431 11222 565555544433 23
Q ss_pred CCEeEEEeccC
Q 022949 89 SKVTAVSGSGQ 99 (289)
Q Consensus 89 ~~I~aIgis~~ 99 (289)
.+|.+|.||+.
T Consensus 55 ~~i~~i~IsSV 65 (249)
T 3bex_A 55 REIKGIGVASV 65 (249)
T ss_dssp GGEEEEEEEES
T ss_pred ccCCEEEEEcC
Confidence 46888998873
No 54
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=95.74 E-value=0.0092 Score=61.23 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=66.9
Q ss_pred CCceEEEEEcCCCceEEEEEcCC-CC--EEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSN-LN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~-G~--il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
++..|||||+|+||+|+++++.+ |+ ++...+..+.. |.+- .....+ ++++.+.++++.+.+
T Consensus 524 E~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~i--p~~~----~~~~~~----------~lfd~Ia~~i~~~l~ 587 (917)
T 1cza_N 524 ENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI--PIEI----MQGTGE----------ELFDHIVSCISDFLD 587 (917)
T ss_dssp CCEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECC--CHHH----HTSBHH----------HHHHHHHHHHHHHHH
T ss_pred cceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEec--Cccc----ccCCHH----------HHHHHHHHHHHHHHH
Confidence 35689999999999999999985 65 66554444432 2210 011223 788888888887654
Q ss_pred c--CCCCCE-eEEEeccCcee-------eEEecCCCcccccCCC-CCCCccccccccC----C--CCCCCeeccCCcHHH
Q 022949 85 S--LDLSKV-TAVSGSGQQHG-------SVYWKKGSATILSSLD-PKKPLVDQLGDAF----S--TKESPVWMDSSTTAQ 147 (289)
Q Consensus 85 ~--~~~~~I-~aIgis~~~~~-------~v~~d~~g~~~~~~~~-~~~~l~~~l~~~~----~--l~~~i~w~D~Ra~~~ 147 (289)
. .....+ .|++++....- ++.|.|.=.. -+ ...++++.|++.+ + +.++.+-||+.+...
T Consensus 588 ~~~~~~~~l~lG~tfsfPv~q~~i~~~~L~~WtKgf~~----~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tll 663 (917)
T 1cza_N 588 YMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKA----TDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMM 663 (917)
T ss_dssp HHTCCSSCCEEEEEECSCEEEEETTEEEECCCCTTCCC----BSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHH
T ss_pred HcCCCccceeEEEEeeccccccccCccEECceeccccc----CCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHH
Confidence 2 322333 34444443211 1112111000 00 1235556665543 2 235666678777666
Q ss_pred HHHHH
Q 022949 148 CREIE 152 (289)
Q Consensus 148 ~~~~~ 152 (289)
.+.+.
T Consensus 664 a~~y~ 668 (917)
T 1cza_N 664 TCAYE 668 (917)
T ss_dssp HHHTT
T ss_pred HhccC
Confidence 55554
No 55
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=95.73 E-value=0.013 Score=55.77 Aligned_cols=58 Identities=14% Similarity=0.189 Sum_probs=37.4
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCE-EEEEEeecccCCCccCCCCceeeC-CCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNI-VASEQLQFDSELPHYKTKDGVYRD-PSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~i-l~~~~~~~~~~~~~~~~~g~~e~d-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
..||+||+|+||+|+++++.+|+- ....+..++. |.. ..+. .+ ++++.+.++++...+
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I--p~~-----~~~~~~~----------~lfd~Ia~~i~~fl~ 139 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL--PDH-----LRTGTSE----------QLWSFIAKCLKEFVD 139 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC--CTT-----GGGSBHH----------HHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec--Cch-----hccCCHH----------HHHHHHHHHHHHHHH
Confidence 489999999999999999987751 1112222221 221 1111 23 889999999987554
No 56
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.54 E-value=0.028 Score=52.47 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=48.8
Q ss_pred CCceEEEEEcCCCceEEEEEcCC--C-CEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHh
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSN--L-NIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSK 84 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~--G-~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (289)
++++++||||||++||+++...+ | ++++....+..-. . ...-.|.+ ...+++.++++++.+
T Consensus 6 ~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv--~----~G~I~di~----------~~~~~I~~av~~ae~ 69 (419)
T 4a2a_A 6 KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL--D----EGEIKDAI----------AFKESVNTLLKELEE 69 (419)
T ss_dssp -CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE--E----TTEESBHH----------HHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe--e----CCEEEcHH----------HHHHHHHHHHHHHHH
Confidence 46799999999999999999842 3 6777776653211 1 12445655 777788888877654
Q ss_pred c--CCCCCEeEEEeccC
Q 022949 85 S--LDLSKVTAVSGSGQ 99 (289)
Q Consensus 85 ~--~~~~~I~aIgis~~ 99 (289)
. ....+-..+++++.
T Consensus 70 ~~g~~i~~~v~v~i~g~ 86 (419)
T 4a2a_A 70 QLQKSLRSDFVISFSSV 86 (419)
T ss_dssp HHTSCCCSEEEEEECCT
T ss_pred HcCCCcCceEEEEEcCC
Confidence 3 23333145777764
No 57
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.47 E-value=0.024 Score=55.53 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=31.1
Q ss_pred CCceEEEEEcCCCceEEEEEcC-CCCEEEEEEeeccc
Q 022949 8 KDSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDS 43 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~~~ 43 (289)
+..|-++||||||.+.+.|+|. +|+++++.+...+.
T Consensus 204 ~~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ 240 (631)
T 3zyy_X 204 QRVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQ 240 (631)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGG
T ss_pred CCceEEEEEecccceeEEEEECCCCCEEEeecccCCC
Confidence 3468899999999999999995 89999999887663
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.34 E-value=0.017 Score=50.70 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=39.8
Q ss_pred EEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCCCE
Q 022949 12 FLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLSKV 91 (289)
Q Consensus 12 ~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I 91 (289)
+|.||+|.|++|.+++| +++++...+.+++. ....+ ++...+...++.-. .+..+|
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~-----------~~t~d----------e~~~~l~~ll~~~~--~~~~~i 57 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETDR-----------HKTED----------EYGMLVKQLLEHEG--LSFEDV 57 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECCT-----------TCCHH----------HHHHHHHHHHHHTT--CCGGGC
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCCC-----------cCCHH----------HHHHHHHHHHHHcC--CCcccC
Confidence 68999999999999998 45676666555431 11122 55555544443211 334568
Q ss_pred eEEEecc
Q 022949 92 TAVSGSG 98 (289)
Q Consensus 92 ~aIgis~ 98 (289)
.+|.+|+
T Consensus 58 ~~iiISS 64 (268)
T 2h3g_X 58 KGIIVSS 64 (268)
T ss_dssp CEEEEEE
T ss_pred cEEEEEc
Confidence 8888876
No 59
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.96 E-value=0.035 Score=50.45 Aligned_cols=73 Identities=14% Similarity=0.125 Sum_probs=43.7
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCC--EEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLN--IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS 85 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~--il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (289)
+++.++|||||||++|++++. +|+ +......++|...-. ...-.|++ .+.+++.+++++..
T Consensus 11 ~~~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~----~g~i~d~~----------~~~~~ik~~~~~~~-- 73 (377)
T 2ych_A 11 PRVEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLM----EGMVAEPA----------ALAQEIKELLLEAR-- 73 (377)
T ss_dssp CCCCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEE----TTEESCHH----------HHHHHHHHHHHHHT--
T ss_pred CCCceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCccc----CCCcCCHH----------HHHHHHHHHHHHcC--
Confidence 456789999999999999996 555 544555555432111 12334555 66667766666532
Q ss_pred CCCCCEeEEEecc
Q 022949 86 LDLSKVTAVSGSG 98 (289)
Q Consensus 86 ~~~~~I~aIgis~ 98 (289)
....+ ..+++++
T Consensus 74 ~~~~~-v~~~i~~ 85 (377)
T 2ych_A 74 TRKRY-VVTALSN 85 (377)
T ss_dssp CCCCE-EEEEECG
T ss_pred CCcce-EEEEecC
Confidence 22222 3566665
No 60
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=93.57 E-value=0.12 Score=48.57 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=43.2
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc--CC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS--LD 87 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 87 (289)
..||+||+|+||.|+++++..|. +...+..++. |.. ..+.. .+++++.+.+++....+. ..
T Consensus 59 G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~i--p~~-----~~~g~---------~~~LFd~Ia~~i~~fl~~~~~~ 121 (445)
T 3hm8_A 59 GDFLALDLGGTNFRVLLVRVTTG-VQITSEIYSI--PET-----VAQGS---------GQQLFDHIVDCIVDFQQKQGLS 121 (445)
T ss_dssp EEEEEEEESSSSEEEEEEEESSS-EEEEEEEECC--CHH-----HHTSB---------HHHHHHHHHHHHHHHHHHHTCT
T ss_pred eEEEEEEecCCeEEEEEEEECCc-eEEEEEEecc--Ccc-----ccCCC---------HHHHHHHHHHHHHHHHHHhCcc
Confidence 48999999999999999998776 3333333331 221 11111 127888888888875432 21
Q ss_pred -CCCEeEEEecc
Q 022949 88 -LSKVTAVSGSG 98 (289)
Q Consensus 88 -~~~I~aIgis~ 98 (289)
..--.|+.+|-
T Consensus 122 ~~~lplGftFSF 133 (445)
T 3hm8_A 122 GQSLPLGFTFSF 133 (445)
T ss_dssp TCCCCEEEEECS
T ss_pred cccCcceEEEee
Confidence 12235566653
No 61
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=93.55 E-value=0.075 Score=47.88 Aligned_cols=33 Identities=12% Similarity=0.226 Sum_probs=27.4
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEee
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~ 40 (289)
++.++|+||-||||.|+-++|.+|+++++.+.+
T Consensus 5 ~~~~~IavDWGTSnlRa~l~~~~g~vl~~~~~~ 37 (330)
T 3t69_A 5 TAGYYAAVDWGTSSFRLWIIGEDGAVLAERRSA 37 (330)
T ss_dssp ---CEEEEEECSSCEEEEEECTTSCEEEEEEES
T ss_pred CCCCEEEEEecchheehheecCCCCchhhhcCC
Confidence 456899999999999999999999999976654
No 62
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=93.51 E-value=0.13 Score=48.71 Aligned_cols=64 Identities=14% Similarity=0.248 Sum_probs=40.8
Q ss_pred CCCCCc---eEEEEEcCCCceEEEEEcCCCC-----EEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHH
Q 022949 5 SLPKDS---LFLGFDSSTQSLKATVLDSNLN-----IVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALD 76 (289)
Q Consensus 5 ~~~~~~---~~lgIDiGtt~iK~~l~d~~G~-----il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~ 76 (289)
++++.+ .||+||+|+||.|++++...|+ .+...+..|+. |+. ..+.. .+++++.+.
T Consensus 69 ~lP~G~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~I--p~~-----l~~gt---------~~eLFd~IA 132 (470)
T 3f9m_A 69 STPEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSI--PED-----AMTGT---------AEMLFDYIS 132 (470)
T ss_dssp SSCCCCCCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEEC--CHH-----HHSSB---------HHHHHHHHH
T ss_pred cCCCCCcceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecC--ChH-----hccCC---------HHHHHHHHH
Confidence 345543 8999999999999999996543 34444444432 221 11111 128999999
Q ss_pred HHHHHHHh
Q 022949 77 LMLQKLSK 84 (289)
Q Consensus 77 ~~~~~l~~ 84 (289)
+++....+
T Consensus 133 ~~i~~fl~ 140 (470)
T 3f9m_A 133 ECISDFLD 140 (470)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988654
No 63
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=92.10 E-value=0.13 Score=45.73 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=28.6
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEeec
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQF 41 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~ 41 (289)
++.++|+||-||||.|+-++| +|+++++.+.+.
T Consensus 4 m~~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~ 36 (295)
T 3nuw_A 4 MTARYIAIDWGSTNLRAWLYQ-GEECLESRQSEA 36 (295)
T ss_dssp GGCEEEEEEECSSCEEEEEEE-TTEEEEEEEESC
T ss_pred CCccEEEEEecchheeeeeec-CCceehhhcCCC
Confidence 457899999999999999999 899998776654
No 64
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=91.47 E-value=0.14 Score=46.13 Aligned_cols=31 Identities=29% Similarity=0.374 Sum_probs=22.6
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeecc
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~ 42 (289)
++||+|||+-|+|+++++.+|++ ...+.++|
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~P 31 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEF-KVHHLYFP 31 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCC-EEEEC---
T ss_pred CeeEEEecccceeeeeecCCCce-EEEEEecC
Confidence 47999999999999999989998 66666655
No 65
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=91.27 E-value=0.17 Score=44.80 Aligned_cols=27 Identities=11% Similarity=0.108 Sum_probs=21.9
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEE
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVAS 36 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~ 36 (289)
..+.+|||+|+|.+|++++ ++++++..
T Consensus 19 ~~~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp --CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred CCeEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 4578999999999999999 56777765
No 66
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=88.20 E-value=0.22 Score=45.71 Aligned_cols=22 Identities=5% Similarity=0.089 Sum_probs=18.4
Q ss_pred CceEEEEEcCCCceEEEEEcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNL 31 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G 31 (289)
.++++|||+|||+++++++ .+|
T Consensus 12 ~~~vvGIDlGTt~s~va~~-~~g 33 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHT-VDD 33 (409)
T ss_dssp -CCEEEEEECSSEEEEEEE-ETT
T ss_pred CCcEEEEEcCCCeEEEEEE-eCC
Confidence 5689999999999999998 444
No 67
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=87.03 E-value=0.84 Score=42.31 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=27.1
Q ss_pred CCCCCceEEEEEcCCCceEEEEEc-CCCCEEEEEEee
Q 022949 5 SLPKDSLFLGFDSSTQSLKATVLD-SNLNIVASEQLQ 40 (289)
Q Consensus 5 ~~~~~~~~lgIDiGtt~iK~~l~d-~~G~il~~~~~~ 40 (289)
+-|+.+++|.|..|+||+|..||| .+++++.+...+
T Consensus 14 ~~Ms~klILviN~GSSS~K~~lf~~~~~~~l~~G~~e 50 (415)
T 3sk3_A 14 SHMSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAE 50 (415)
T ss_dssp ----CCEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred ccCCCCeEEEEeCchHhhhheeEECCCCCEEEEeeEe
Confidence 457788999999999999999999 467888765443
No 68
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=85.67 E-value=0.44 Score=43.16 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.6
Q ss_pred ceEEEEEcCCCceEEEEEcCCCC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLN 32 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~ 32 (289)
+.++|||+|||+++++++. +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 5689999999999999986 444
No 69
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=84.99 E-value=0.94 Score=39.57 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=23.9
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEe
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~ 39 (289)
..++|.||+|.|++|.+++|.+++++...+.
T Consensus 22 ~~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~ 52 (271)
T 2f9w_A 22 ASMILELDCGNSLIKWRVIEGAARSVAGGLA 52 (271)
T ss_dssp -CEEEEEEECSSCEEEEEEETTTEEEEEEEE
T ss_pred cCcEEEEEeCCCeeEEEEEeCCCEEEEEEEe
Confidence 4578999999999999999865666655443
No 70
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=84.94 E-value=1.9 Score=38.47 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=24.3
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEEEEEeec
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVASEQLQF 41 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~ 41 (289)
++||||.++..++++|++. |++++.....+
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~ 31 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTL 31 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEEC
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEe
Confidence 5899999999999999975 57887655443
No 71
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=84.76 E-value=2 Score=38.23 Aligned_cols=22 Identities=14% Similarity=0.060 Sum_probs=18.6
Q ss_pred CceEEEEEcCCCceEEEEEcCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSN 30 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~ 30 (289)
.+.+.+||+||.++|..+++.+
T Consensus 3 ~~~~A~IDiGSNsirL~I~~~~ 24 (315)
T 3mdq_A 3 SQRIGVIDMGTNTFHLLITDIV 24 (315)
T ss_dssp -CEEEEEEECSSEEEEEEEEEE
T ss_pred CceEEEEEecCCcEEEEEEEEc
Confidence 4568899999999999999853
No 72
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=83.13 E-value=1.3 Score=39.90 Aligned_cols=23 Identities=17% Similarity=0.345 Sum_probs=19.6
Q ss_pred CCceEEEEEcCCCceEEEEEcCC
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSN 30 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~ 30 (289)
+.+.+.+|||||.++|..+++.+
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~ 36 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVD 36 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCeEEEEEcccceeEeEEEEEc
Confidence 34578999999999999999853
No 73
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=82.59 E-value=4.8 Score=36.90 Aligned_cols=67 Identities=16% Similarity=0.055 Sum_probs=41.4
Q ss_pred eEEEEEcCCCceEEEEEcC-CCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhc-C--
Q 022949 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKS-L-- 86 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-- 86 (289)
-+|.|..|+||+|..|||. +++++++...+-- -.+ +.+.. .--.++..+++.|.+. .
T Consensus 13 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~i-g~~--------~~~~~----------~h~~a~~~il~~L~~~~~~~ 73 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPEFGVAASTGIVERI-GEE--------SSPVP----------DHDAALRRAFDMLAGDGVDL 73 (391)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEECCT-TCT--------TCSCC----------SHHHHHHHHHHHHHHTTCCT
T ss_pred eEEEEecCchhheeEEEecCCCceEEEEEEeec-CCC--------ccCcc----------CHHHHHHHHHHHHHhcCCCC
Confidence 4899999999999999996 5666666654310 000 11111 2334566666666554 2
Q ss_pred CCCCEeEEEe
Q 022949 87 DLSKVTAVSG 96 (289)
Q Consensus 87 ~~~~I~aIgi 96 (289)
+..+|.+||-
T Consensus 74 ~~~~i~aVGh 83 (391)
T 3r9p_A 74 NTAGLVAVGH 83 (391)
T ss_dssp TTTTEEEEEE
T ss_pred cccceeEEec
Confidence 3468999864
No 74
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=81.20 E-value=6.7 Score=36.01 Aligned_cols=30 Identities=23% Similarity=0.226 Sum_probs=23.8
Q ss_pred ceEEEEEcCCCceEEEEEcCC-CCEEEEEEe
Q 022949 10 SLFLGFDSSTQSLKATVLDSN-LNIVASEQL 39 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~-G~il~~~~~ 39 (289)
..+|.|..|+||+|..|||.+ ..++.+...
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~ 53 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPASGEFLADGII 53 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTTTCCEEEEEEE
T ss_pred ccEEEEeCCchhheEEEEECCCCceeeeeee
Confidence 358999999999999999964 556666643
No 75
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=81.00 E-value=3.3 Score=41.51 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=27.4
Q ss_pred CceEEEEEcC-CCceEEEEEcCCCCEEEEEEe
Q 022949 9 DSLFLGFDSS-TQSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 9 ~~~~lgIDiG-tt~iK~~l~d~~G~il~~~~~ 39 (289)
.+.++|+|-| .|++|++++|.+|+++.....
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i 359 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV 359 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE
Confidence 3579999999 699999999999999987765
No 76
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=80.32 E-value=2.5 Score=37.55 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=18.0
Q ss_pred eEEEEEcCCCceEEEEEcCC
Q 022949 11 LFLGFDSSTQSLKATVLDSN 30 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~ 30 (289)
.+.+||+||.++|..+++.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~ 32 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIK 32 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEE
T ss_pred EEEEEEECcCcEEEEEEEEc
Confidence 67899999999999999953
No 77
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=80.11 E-value=1 Score=43.29 Aligned_cols=22 Identities=18% Similarity=0.148 Sum_probs=18.4
Q ss_pred CCceEEEEEcCCCceEEEEEcC
Q 022949 8 KDSLFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~ 29 (289)
+...++|||+|||++.+++++.
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~~ 23 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQH 23 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEECS
T ss_pred CCCCEEEEEeCcccEEEEEEEC
Confidence 3456899999999999999863
No 78
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=80.07 E-value=0.8 Score=41.71 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.4
Q ss_pred CCceEEEEEcCCCceEEEEEc
Q 022949 8 KDSLFLGFDSSTQSLKATVLD 28 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d 28 (289)
....++|||+|||++++++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~ 41 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQ 41 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEE
T ss_pred ccCCEEEEEcCCccEEEEEEE
Confidence 345789999999999999886
No 79
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=79.96 E-value=1.5 Score=34.72 Aligned_cols=26 Identities=23% Similarity=0.196 Sum_probs=22.6
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEE
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVA 35 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~ 35 (289)
..+||||.|+..|..++.|..|.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEE
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEe
Confidence 35899999999999999999887643
No 80
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=79.41 E-value=1.4 Score=38.98 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=20.3
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEE
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIV 34 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il 34 (289)
+++|||+|++++|++....+|.+.
T Consensus 1 m~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 1 MLVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp CEEEEEECSSEEEEEEECSSSCEE
T ss_pred CeEEEecCCccceEEEecCCCEEE
Confidence 378999999999999877888753
No 81
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=78.19 E-value=4.6 Score=38.47 Aligned_cols=33 Identities=9% Similarity=0.293 Sum_probs=27.9
Q ss_pred CCceEEEEEcCCCceEEEEEcCCCCEEEEEEee
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~ 40 (289)
+..++||||-.+..+-++|++.++++++.....
T Consensus 4 ~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~ 36 (540)
T 3en9_A 4 DPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIM 36 (540)
T ss_dssp CSCEEEEEECSSSEEEEEEEETTSCEEEEEEEE
T ss_pred ccceEEEEEcCccceEEEEEECCCeEEEEEEEe
Confidence 346899999999999999999888898877654
No 82
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=77.85 E-value=5 Score=41.50 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=26.9
Q ss_pred CceEEEEEcCC-----CceEEEEEcCCCCEEEEEEe
Q 022949 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 9 ~~~~lgIDiGt-----t~iK~~l~d~~G~il~~~~~ 39 (289)
.+.++|||-|- |++|++++|.+|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 46799999984 48999999999999998766
No 83
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=76.61 E-value=4.1 Score=38.71 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=18.3
Q ss_pred CCceEEEEEcCCCceEEEEEcCC
Q 022949 8 KDSLFLGFDSSTQSLKATVLDSN 30 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~~ 30 (289)
+.+.+.+||+||.++|..+++.+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~ 31 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV 31 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc
Confidence 34578999999999999999853
No 84
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=73.93 E-value=1.3 Score=40.06 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=16.7
Q ss_pred eEEEEEcCCCceEEEEEcC
Q 022949 11 LFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~ 29 (289)
.++|||+|||++++++++.
T Consensus 3 ~~vGIDlGTt~s~va~~~~ 21 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDG 21 (383)
T ss_dssp CCCEEECCSSEEEEEEEET
T ss_pred cEEEEEcCCCCEEEEEEEC
Confidence 4789999999999999863
No 85
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=73.49 E-value=0.84 Score=38.42 Aligned_cols=23 Identities=30% Similarity=0.365 Sum_probs=11.3
Q ss_pred EEEEcCCCce--------EEEEEcCCCCEEE
Q 022949 13 LGFDSSTQSL--------KATVLDSNLNIVA 35 (289)
Q Consensus 13 lgIDiGtt~i--------K~~l~d~~G~il~ 35 (289)
=|+|+||.|+ |+++||.+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlDGTLvD 39 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLDGVITD 39 (250)
T ss_dssp ---------------CCCCEEEECTBTTTBC
T ss_pred ccccCCCCCcccCccchhheeeecCCCcccC
Confidence 3899999997 8999999998753
No 86
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=72.15 E-value=5.6 Score=35.52 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=25.8
Q ss_pred CCCceEEEEEcCCCceEEEEEcCCCCEEEEEEee
Q 022949 7 PKDSLFLGFDSSTQSLKATVLDSNLNIVASEQLQ 40 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~ 40 (289)
|+..++||||--+.-+-++|++ ++++++.....
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~ 35 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSM 35 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEE
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEe
Confidence 4567899999988899999998 55788765443
No 87
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=70.73 E-value=9.4 Score=40.17 Aligned_cols=31 Identities=6% Similarity=0.157 Sum_probs=27.0
Q ss_pred CceEEEEEcCC-----CceEEEEEcCCCCEEEEEEe
Q 022949 9 DSLFLGFDSST-----QSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 9 ~~~~lgIDiGt-----t~iK~~l~d~~G~il~~~~~ 39 (289)
.+.++|||-|- |++|++++|.+|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 46899999984 38999999999999998766
No 88
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=70.61 E-value=2.4 Score=41.15 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=16.5
Q ss_pred eEEEEEcCCCceEEEEEc
Q 022949 11 LFLGFDSSTQSLKATVLD 28 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d 28 (289)
.++|||+|||++++++++
T Consensus 3 ~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 589999999999999985
No 89
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=70.11 E-value=8.5 Score=36.49 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=24.0
Q ss_pred CCCceEEEEEcCCCceEEEEEcCC-C--CEEEEEEe
Q 022949 7 PKDSLFLGFDSSTQSLKATVLDSN-L--NIVASEQL 39 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~d~~-G--~il~~~~~ 39 (289)
...+.+.+||+||.|+|..+++.. + +++.+...
T Consensus 12 ~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~ 47 (508)
T 3hi0_A 12 TGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKV 47 (508)
T ss_dssp TTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEE
T ss_pred ccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeE
Confidence 334678999999999999999964 2 44444433
No 90
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.64 E-value=3.5 Score=37.29 Aligned_cols=21 Identities=10% Similarity=0.121 Sum_probs=18.8
Q ss_pred CceEEEEEcCCCceEEEEEcC
Q 022949 9 DSLFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~ 29 (289)
.+++++||+|++++|..|++-
T Consensus 2 ~~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEE
Confidence 467999999999999999983
No 91
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=67.43 E-value=3 Score=39.10 Aligned_cols=21 Identities=10% Similarity=-0.051 Sum_probs=18.9
Q ss_pred CceEEEEEcCCCceEEEEEcC
Q 022949 9 DSLFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~ 29 (289)
.+|.+.||+|++++|..|++-
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~ 53 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKW 53 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEE
T ss_pred ceEEEEEEcCCCCeEEEEEEE
Confidence 468899999999999999984
No 92
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=66.55 E-value=3.2 Score=39.28 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=16.9
Q ss_pred eEEEEEcCCCceEEEEEcC
Q 022949 11 LFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~ 29 (289)
.++|||+|||++++++.+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4899999999999999864
No 93
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=66.47 E-value=15 Score=33.38 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=29.5
Q ss_pred CCCceEEEEEcCCC--ceEEEEEcCCCC---EEEEEEeecc
Q 022949 7 PKDSLFLGFDSSTQ--SLKATVLDSNLN---IVASEQLQFD 42 (289)
Q Consensus 7 ~~~~~~lgIDiGtt--~iK~~l~d~~G~---il~~~~~~~~ 42 (289)
|++.++||+=.||| +|-++|++.+|+ ++...++||+
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp 42 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIP 42 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCC
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCC
Confidence 45678999999998 899999998764 6777777776
No 94
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=66.13 E-value=2.7 Score=41.46 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=16.3
Q ss_pred EEEEEcCCCceEEEEEcC
Q 022949 12 FLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 12 ~lgIDiGtt~iK~~l~d~ 29 (289)
++|||+|||+++++++..
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999999864
No 95
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=65.43 E-value=3.1 Score=36.86 Aligned_cols=17 Identities=18% Similarity=0.083 Sum_probs=14.9
Q ss_pred eEEEEEcCCCceEEEEE
Q 022949 11 LFLGFDSSTQSLKATVL 27 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~ 27 (289)
..+|||+|||++|+++.
T Consensus 4 ~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR 20 (344)
T ss_dssp CEEEEEECSSEEEEEET
T ss_pred ceEEEEcCcCcEEEEEC
Confidence 47899999999999864
No 96
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=64.30 E-value=17 Score=30.26 Aligned_cols=63 Identities=8% Similarity=0.051 Sum_probs=39.1
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecccCCCccCCCCceeeCCCCCCCcCCChhHHHHHHHHHHHHHHhcCCCC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTLMWIEALDLMLQKLSKSLDLS 89 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (289)
.++|+||--|..+-++|++ +++++ ....... . .+.+.+...+.++++... +...
T Consensus 12 ~~iLaidTS~~~~sval~~-~~~~l-~~~~~~~--r--------------------~Hse~L~p~i~~~L~~a~--~~~~ 65 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK-GEDLF-EISYTGE--K--------------------KHAEILPVVVKKLLDELD--LKVK 65 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC--G--------------------GGGGHHHHHHHHHHHHHT--CCGG
T ss_pred ceEEEEEcCCcCeEEEEEE-CCEEE-EEEecch--H--------------------HHHHHHHHHHHHHHHHcC--CCHH
Confidence 4689999999999999998 56666 3222111 0 011155555555555432 4567
Q ss_pred CEeEEEecc
Q 022949 90 KVTAVSGSG 98 (289)
Q Consensus 90 ~I~aIgis~ 98 (289)
+|.+|+++.
T Consensus 66 dld~Iav~~ 74 (218)
T 2a6a_A 66 DLDVVGVGI 74 (218)
T ss_dssp GCSEEEEEC
T ss_pred HCCEEEEEc
Confidence 788888875
No 97
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=64.09 E-value=5.4 Score=37.34 Aligned_cols=22 Identities=5% Similarity=-0.017 Sum_probs=19.1
Q ss_pred CCceEEEEEcCCCceEEEEEcC
Q 022949 8 KDSLFLGFDSSTQSLKATVLDS 29 (289)
Q Consensus 8 ~~~~~lgIDiGtt~iK~~l~d~ 29 (289)
+.+|.+.||+|+|++|..|+.-
T Consensus 32 ~~~y~iviDaGSsgtRl~VY~~ 53 (452)
T 3zx3_A 32 NVKYGIVLDAGSSHTNLYIYKW 53 (452)
T ss_dssp CEEEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEEEcCCCCcEEEEEEE
Confidence 3468889999999999999984
No 98
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=63.55 E-value=5.2 Score=29.13 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=19.8
Q ss_pred EEEEEcCCCceEEEEEcCCCCE
Q 022949 12 FLGFDSSTQSLKATVLDSNLNI 33 (289)
Q Consensus 12 ~lgIDiGtt~iK~~l~d~~G~i 33 (289)
+||||+|+..|=+++.|..|.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 7999999999999999987744
No 99
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=62.62 E-value=3.5 Score=39.98 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=15.9
Q ss_pred eEEEEEcCCCceEEEEEc
Q 022949 11 LFLGFDSSTQSLKATVLD 28 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d 28 (289)
.++|||+|||++.+++++
T Consensus 3 ~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp -CEEEECCSSEEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEEE
Confidence 378999999999999986
No 100
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=61.74 E-value=9.3 Score=35.45 Aligned_cols=32 Identities=13% Similarity=0.343 Sum_probs=26.1
Q ss_pred CceEEEEEcCCCceEEEEEcC-CCCEEEEEEee
Q 022949 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQ 40 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~ 40 (289)
.+++|.|.+|+||+|..|||. +.+++++...+
T Consensus 5 ~~~ILviNaGSSSlKf~L~~~~~~~~l~~G~ve 37 (438)
T 4h0p_A 5 AEYLLAINCGSSSIKGKLFAIPSFELLANLAVT 37 (438)
T ss_dssp CEEEEEEEECSSCEEEEEEEETTTEEEEEEEEE
T ss_pred CCEEEEEECCcccceeEEEEcCCCCeeeEEEEe
Confidence 568999999999999999994 56677766554
No 101
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=61.43 E-value=11 Score=34.72 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=27.2
Q ss_pred CceEEEEEcCCCceEEEEEcC-CCCEEEEEEeec
Q 022949 9 DSLFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~ 41 (289)
.+.+|.|..|+||+|..|||. +.+++.+...+.
T Consensus 17 ~~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 17 FPVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred CCeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 356999999999999999995 467888777664
No 102
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=61.28 E-value=8.7 Score=29.76 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=21.0
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCE
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNI 33 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~i 33 (289)
..+||||+|+..|=+++.|..+.+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTTE
T ss_pred CeEEEEEeCCCEEEEEEEcCCCCE
Confidence 358999999999999999998764
No 103
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=60.64 E-value=27 Score=27.87 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=20.1
Q ss_pred eEEEEEcCCCceEEEEEcCCCC
Q 022949 11 LFLGFDSSTQSLKATVLDSNLN 32 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~ 32 (289)
.+||||-|++++=.+++|.+|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 5899999999999999998775
No 104
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=60.17 E-value=7.7 Score=37.35 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.1
Q ss_pred ceEEEEEcCCCceEEEEEcC-CC--CEEEEEEeecc
Q 022949 10 SLFLGFDSSTQSLKATVLDS-NL--NIVASEQLQFD 42 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~-~G--~il~~~~~~~~ 42 (289)
+|++|||||+|++.+++-+. +| +++.+...++.
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~tt 37 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVATT 37 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECC
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCC
Confidence 68999999999999998764 35 56777777653
No 105
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=55.85 E-value=38 Score=28.07 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=21.8
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEE
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASE 37 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~ 37 (289)
..+|+||--|..+-++|++. |+++...
T Consensus 2 M~iLaIdTS~~~~svAl~~~-~~~~~~~ 28 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVN-DQVISRS 28 (213)
T ss_dssp CCEEEEECSSSEEEEEEESS-SCEEEEE
T ss_pred CEEEEEEccCcceEEEEEEC-CEEEEEE
Confidence 35899999998999999974 7777653
No 106
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=55.25 E-value=15 Score=33.43 Aligned_cols=30 Identities=10% Similarity=0.189 Sum_probs=24.7
Q ss_pred eEEEEEcCCCceEEEEEcC-CCCEEEEEEee
Q 022949 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQ 40 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~ 40 (289)
.+|.|..|+||+|..|||. +++++++...+
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 6899999999999999995 56677766554
No 107
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=53.50 E-value=14 Score=34.00 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=25.2
Q ss_pred eEEEEEcCCCceEEEEEcC-CCCEEEEEEeec
Q 022949 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~ 41 (289)
.+|.|..|+||+|..|||. +++++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4899999999999999995 456777776654
No 108
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=52.68 E-value=7 Score=34.89 Aligned_cols=23 Identities=13% Similarity=0.133 Sum_probs=17.8
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEE
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIV 34 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il 34 (289)
.+.+|||+||+++|+.. .+|.++
T Consensus 21 m~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp CEEEEEEECSSEEEEEC--GGGCEE
T ss_pred eEEEEEecCCcceeEEe--cCCCEE
Confidence 46799999999999884 446544
No 109
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=51.62 E-value=18 Score=28.67 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=20.3
Q ss_pred eEEEEEcCCCceEEEEEcCCCCE
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNI 33 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~i 33 (289)
.+||||-|++++=.++++.+|+.
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~ 24 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQ 24 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTE
T ss_pred EEEEEccCCCCeeEEEEEecCCe
Confidence 48999999999999999987763
No 110
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=50.36 E-value=14 Score=33.94 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=25.2
Q ss_pred eEEEEEcCCCceEEEEEcC-CCCEEEEEEeec
Q 022949 11 LFLGFDSSTQSLKATVLDS-NLNIVASEQLQF 41 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~-~G~il~~~~~~~ 41 (289)
.+|.|..|+||+|..|||. +.+++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4899999999999999995 456777776654
No 111
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=49.15 E-value=34 Score=28.57 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=19.6
Q ss_pred eEEEEEcCCCceEEEEEcCCCCEEE
Q 022949 11 LFLGFDSSTQSLKATVLDSNLNIVA 35 (289)
Q Consensus 11 ~~lgIDiGtt~iK~~l~d~~G~il~ 35 (289)
++|+||--+..+-++|++ +|+++.
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~ 25 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINA 25 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEE
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEE
Confidence 689999988889999997 466654
No 112
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=47.72 E-value=9.9 Score=33.65 Aligned_cols=21 Identities=10% Similarity=0.053 Sum_probs=17.8
Q ss_pred CCCceEEEEEcCCCceEEEEE
Q 022949 7 PKDSLFLGFDSSTQSLKATVL 27 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~~l~ 27 (289)
|+.++++|||+|-.++|++-.
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEH
T ss_pred ccCceEEEEecCCceEEEEec
Confidence 456889999999999999963
No 113
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=45.96 E-value=22 Score=32.65 Aligned_cols=30 Identities=37% Similarity=0.259 Sum_probs=23.8
Q ss_pred CceEEEEEcCCCceEEEEEcCCCCEEEEEEe
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNLNIVASEQL 39 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G~il~~~~~ 39 (289)
...+|.|..|+||+|..|||. .+++++...
T Consensus 13 ~~~iLviN~GSSSlKf~l~~~-~~~l~~G~v 42 (404)
T 4h0o_A 13 MSNVLIFNVGSSSLTYKVFCS-DNIVCSGKS 42 (404)
T ss_dssp -CEEEEEEECSSCEEEEEEET-TEEEEEEEE
T ss_pred cceEEEEECCchhheeeEeec-chhhhccee
Confidence 346899999999999999998 666665544
No 114
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=41.36 E-value=11 Score=34.34 Aligned_cols=23 Identities=13% Similarity=-0.155 Sum_probs=18.4
Q ss_pred CceEEEEEcCCCceEEEEEcCCC
Q 022949 9 DSLFLGFDSSTQSLKATVLDSNL 31 (289)
Q Consensus 9 ~~~~lgIDiGtt~iK~~l~d~~G 31 (289)
..-.++||+||+++|+....+++
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~ 26 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTE 26 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSS
T ss_pred CCCeEEEECCCCeEEEeeCCCCC
Confidence 34578999999999999876554
No 115
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=40.51 E-value=38 Score=23.44 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=27.3
Q ss_pred HHHHHHcCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeE
Q 022949 233 KIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLV 276 (289)
Q Consensus 233 ~~ll~~~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV 276 (289)
+++|+.+++. .+.||.|..+. -+|+.+|+..|-.|
T Consensus 23 ~~lL~~y~i~-~~qLP~I~~~D--------Pvar~~G~k~GdVv 57 (77)
T 1eik_A 23 KRVLKELDAH-PEQLPKIKTTD--------PVAKAIGAKRGDIV 57 (77)
T ss_dssp HHHHHHTTCC-TTTSCCCBTTS--------HHHHGGGCCTTCEE
T ss_pred HHHHHHcCCC-HHHCCeeeCcC--------HhhHHhCCCCCCEE
Confidence 5799999988 89999987654 45677898887544
No 116
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=40.46 E-value=1.2e+02 Score=29.12 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=20.0
Q ss_pred ceEEEEEcCCCceEEEEEc--CCCCEEEEE
Q 022949 10 SLFLGFDSSTQSLKATVLD--SNLNIVASE 37 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d--~~G~il~~~ 37 (289)
+|+.|||||.+++-++|-+ .+|++-.-+
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~ 31 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITH 31 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEee
Confidence 6899999998888877744 446544333
No 117
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=37.25 E-value=37 Score=23.56 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=27.3
Q ss_pred cHHHHHHcCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeE
Q 022949 232 SKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLV 276 (289)
Q Consensus 232 ~~~ll~~~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV 276 (289)
-+++|+.+++. .+.||.|..+. -+|+.+|+..|-.|
T Consensus 20 k~~lL~~y~i~-~~qLPrI~~~D--------Pvar~~G~k~GdVv 55 (78)
T 1hmj_A 20 VEEILKRYNIK-IQQLPKIYEDD--------PVIQEIGAKEGDVV 55 (78)
T ss_pred HHHHHHHcCCC-HHHCCeeeCcC--------HhhHHhCCCCCCEE
Confidence 35799999988 89999987654 45677888877544
No 118
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=36.50 E-value=23 Score=32.10 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=26.9
Q ss_pred ceEEEEEcCCC--ceEEEEEcCCC--CEEEEEEeecc
Q 022949 10 SLFLGFDSSTQ--SLKATVLDSNL--NIVASEQLQFD 42 (289)
Q Consensus 10 ~~~lgIDiGtt--~iK~~l~d~~G--~il~~~~~~~~ 42 (289)
+++||+=.||| +|-++|++.+| +++...++||+
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~ 38 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMP 38 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECC
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCC
Confidence 58999999997 89999998766 56677777776
No 119
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=36.08 E-value=9.7 Score=28.49 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=24.3
Q ss_pred HHHHH-HHHhcCcchHhhcccccccchhHHHHhh
Q 022949 175 GPQIR-KLFQTQPGVYDDTERISVVSSFMASLLI 207 (289)
Q Consensus 175 ~~kl~-wl~~~~pe~~~~~~~~~~~~d~l~~~Lt 207 (289)
..|+- |+++|..+++.|.-.-..=.|||.|+++
T Consensus 78 ~akvekwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 34444 8888888888777666666799999886
No 120
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=34.22 E-value=16 Score=32.78 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=18.0
Q ss_pred ceEEEEEcCCCceEEEEEcCCC
Q 022949 10 SLFLGFDSSTQSLKATVLDSNL 31 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G 31 (289)
.-.++||+||+++|+....++.
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~ 26 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDA 26 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSS
T ss_pred CceEEEECCCCeEEEEECCCCC
Confidence 3468999999999999877655
No 121
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=29.90 E-value=70 Score=22.43 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=26.7
Q ss_pred HHHHHHcCCChhhhcCCcccCCccceecCHHHHHHcCCCCCCeE
Q 022949 233 KIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLV 276 (289)
Q Consensus 233 ~~ll~~~g~~~~~~LP~v~~~g~~~G~v~~~~a~~~GL~~g~pV 276 (289)
+++|+.+++. .+.||.|.... -+|+.+|+.+|-.|
T Consensus 29 ~~ll~~y~i~-~~qLP~I~~~D--------Pva~~~g~k~GdVv 63 (84)
T 4ayb_H 29 YKILKELGIR-PEQLPWIRASD--------PVARSINAKPGDII 63 (84)
T ss_dssp HHHHHHHTCC-GGGSCCEESSS--------HHHHHHTCCTTCEE
T ss_pred HHHHHHhcCC-HhHCCeecccC--------HhHHhhCCCCCCEE
Confidence 4689999987 79999997544 36778899887543
No 122
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=28.97 E-value=71 Score=27.90 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=26.2
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecc
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~ 42 (289)
+-.+.||||+.|+-.++++ ++++....+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~-~~~~~~~~Sl~lG 162 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN-KNEILWKQSFEIG 162 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC-SSCEEEEEEESCC
T ss_pred CCEEEEEeCCCceEEEEEE-CCeEeeeEEEech
Confidence 3477899999999999997 6778887777764
No 123
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=25.90 E-value=74 Score=24.75 Aligned_cols=31 Identities=6% Similarity=0.122 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHh-c-CCCCCEeEEEeccC
Q 022949 69 LMWIEALDLMLQKLSK-S-LDLSKVTAVSGSGQ 99 (289)
Q Consensus 69 ~~~~~~~~~~~~~l~~-~-~~~~~I~aIgis~~ 99 (289)
+++++++.++++++.+ + +.+++|.+|=||.+
T Consensus 47 e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 47 DEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4899999999998765 4 77889999999875
No 124
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=25.04 E-value=38 Score=30.18 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=15.3
Q ss_pred CCCceEEEEEcCCCceEE
Q 022949 7 PKDSLFLGFDSSTQSLKA 24 (289)
Q Consensus 7 ~~~~~~lgIDiGtt~iK~ 24 (289)
|+..+++|||+|-+.+|+
T Consensus 1 m~~~~iigiD~G~~~~K~ 18 (355)
T 3js6_A 1 MSNVYVMALDFGNGFVKG 18 (355)
T ss_dssp -CCEEEEEEEECSSEEEE
T ss_pred CCccEEEEEEcCCCcEEE
Confidence 456789999999999995
No 125
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=24.01 E-value=85 Score=23.82 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHhc--CCCCCEeEEEeccC
Q 022949 69 LMWIEALDLMLQKLSKS--LDLSKVTAVSGSGQ 99 (289)
Q Consensus 69 ~~~~~~~~~~~~~l~~~--~~~~~I~aIgis~~ 99 (289)
+++++++.++++++.+. +.+++|.+|=||.+
T Consensus 18 e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 18 EEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 48999999999987653 77889999999875
No 126
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=22.89 E-value=1.1e+02 Score=23.04 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHhc--CCC-CCEeEEEeccC
Q 022949 69 LMWIEALDLMLQKLSKS--LDL-SKVTAVSGSGQ 99 (289)
Q Consensus 69 ~~~~~~~~~~~~~l~~~--~~~-~~I~aIgis~~ 99 (289)
+++++++.++++++.+. +.+ ++|.+|=||.+
T Consensus 17 e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 17 EAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 48999999999987653 777 89999999875
No 127
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=21.92 E-value=29 Score=28.90 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=13.5
Q ss_pred EEEEEcCCCceEEEEEcCCCCE
Q 022949 12 FLGFDSSTQSLKATVLDSNLNI 33 (289)
Q Consensus 12 ~lgIDiGtt~iK~~l~d~~G~i 33 (289)
+|.||+|-|++| +++ ++++
T Consensus 3 ~L~iDiGNT~ik--~~~-~~~l 21 (219)
T 2nrh_A 3 LLLCDIGNSNAN--FLD-DNKY 21 (219)
T ss_dssp CCEEEECSSEEE--EEC---CE
T ss_pred EEEEEeCCCEEE--EEE-CCEE
Confidence 368999999999 675 3344
No 128
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=20.98 E-value=1.1e+02 Score=22.96 Aligned_cols=22 Identities=23% Similarity=0.228 Sum_probs=18.5
Q ss_pred ceEEEEEcCCCCEEEEEEeecc
Q 022949 21 SLKATVLDSNLNIVASEQLQFD 42 (289)
Q Consensus 21 ~iK~~l~d~~G~il~~~~~~~~ 42 (289)
++++.|+|.+|+.++.......
T Consensus 99 ~~~t~L~n~~Gee~A~~~~~~~ 120 (123)
T 3hn9_A 99 DVKVILKNSQGEEVAQRSTVFK 120 (123)
T ss_dssp CEEEEEECTTSCEEEEEEEEEC
T ss_pred CcEEEEECCCCCEEEEEEEEEe
Confidence 6899999999999998776543
No 129
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=20.35 E-value=1e+02 Score=26.96 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=25.2
Q ss_pred ceEEEEEcCCCceEEEEEcCCCCEEEEEEeecc
Q 022949 10 SLFLGFDSSTQSLKATVLDSNLNIVASEQLQFD 42 (289)
Q Consensus 10 ~~~lgIDiGtt~iK~~l~d~~G~il~~~~~~~~ 42 (289)
+-.+.||||+.|+-.++++ +++++...+.++.
T Consensus 138 ~~~lvvDIGGGStEl~~~~-~~~~~~~~Sl~~G 169 (315)
T 1t6c_A 138 GEVCVVDQGGGSTEYVFGK-GYKVREVISLPIG 169 (315)
T ss_dssp SEEEEEEEETTEEEEEEEE-TTEEEEEEEECCC
T ss_pred CCEEEEEeCCCcEEEEEEe-CCceeeEEEEecc
Confidence 3478899999999999986 5667776676654
Done!