BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022952
(289 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578951|ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis]
Length = 572
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/289 (93%), Positives = 283/289 (97%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 284 MMDELKEVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 343
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAE++Q
Sbjct: 344 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQ 403
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VARMGSM+RVIGMIPGMGK+TPAQ+REAEKSLKIME+MIEA
Sbjct: 404 KKIMSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEA 463
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESP RRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P
Sbjct: 464 MTPEEREKPELLAESPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIP 523
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
ALSNLEDALK+EQKAPPGTARRKRRSESRRQF D AS+RPSPRGFG G+
Sbjct: 524 ALSNLEDALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGSGN 572
>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/286 (89%), Positives = 274/286 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVK +LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 288 MMDELKDVKLILNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 347
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 348 SVKEVSGKPIKLVGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQ 407
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSANFDFNDFLKQTR VA+MGSM+RVIGMIPGM K+TP QVREAEK+LKIMEAMIE
Sbjct: 408 KKIMSANFDFNDFLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEV 467
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESP RRKRVAQ SGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P
Sbjct: 468 MTPEEREKPELLAESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIP 527
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
+LSNLEDALK++QKAPPGTARR+R++ES ++FVD S+RP P GFG
Sbjct: 528 SLSNLEDALKTKQKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFG 573
>gi|359481606|ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Vitis vinifera]
gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera]
Length = 567
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/286 (93%), Positives = 280/286 (97%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVKR +NPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 279 MMDELKDVKRAINPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAAL 338
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 339 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQ 398
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VARMGSM+RV+GMIPGMGK+TPAQ+REAEKSLK+ME MIEA
Sbjct: 399 KKIMSAKFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEA 458
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P
Sbjct: 459 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIP 518
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
ALSNLE+ LKSEQKAPPGTARRKRRSESR+QF +PAS+RPSPRGFG
Sbjct: 519 ALSNLEETLKSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFG 564
>gi|3746964|gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
thaliana]
Length = 564
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/289 (85%), Positives = 277/289 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 276 MMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAAL 335
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++Q
Sbjct: 336 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQ 395
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE
Sbjct: 396 KKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEV 455
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+P
Sbjct: 456 MTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIP 515
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
ALS LEDALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 516 ALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|15237580|ref|NP_196014.1| signal recognition particle subunit [Arabidopsis thaliana]
gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein,
chloroplastic; Short=54 chloroplast protein; Short=54CP;
Short=SRP54; Short=cpSRP54; AltName: Full=FFC; Flags:
Precursor
gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
gi|7406404|emb|CAB85514.1| signal recognition particle 54CP protein precursor [Arabidopsis
thaliana]
gi|15293131|gb|AAK93676.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|24030445|gb|AAN41376.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|332003291|gb|AED90674.1| signal recognition particle subunit [Arabidopsis thaliana]
Length = 564
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/289 (85%), Positives = 277/289 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 276 MMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAAL 335
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++Q
Sbjct: 336 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQ 395
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE
Sbjct: 396 KKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEV 455
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+P
Sbjct: 456 MTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIP 515
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
ALS LEDALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 516 ALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|297810481|ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
gi|297318961|gb|EFH49383.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
Length = 562
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/289 (85%), Positives = 277/289 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 274 MMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAAL 333
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++Q
Sbjct: 334 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQ 393
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE
Sbjct: 394 KKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEV 453
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+P
Sbjct: 454 MTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIP 513
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
ALS LEDALK+EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 514 ALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 562
>gi|357511109|ref|XP_003625843.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355500858|gb|AES82061.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 553
Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/286 (88%), Positives = 275/286 (96%), Gaps = 1/286 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 266 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 325
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++Q
Sbjct: 326 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQ 385
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+A
Sbjct: 386 KKIMSAKFDFNDFLKQTRAVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKA 445
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P
Sbjct: 446 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMP 505
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
LSNLE+ALK+E+KAPPGTARR++++ESRR F D ++ R PRGFG
Sbjct: 506 TLSNLEEALKTEEKAPPGTARRRKKAESRRLFAD-STLRQPPRGFG 550
>gi|449451269|ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 572
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/289 (91%), Positives = 281/289 (97%), Gaps = 1/289 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VKRV+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 285 MMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 344
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 345 SVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQ 404
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA FDFNDFLKQTR VARMGSM+RVIGMIPGMGK+TPAQVREAEKSLKIME+MIEA
Sbjct: 405 KKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEA 464
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESP RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P
Sbjct: 465 MTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIP 524
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
AL+NLE+ALK+EQKAPPGTARRKRRSESR+QF + + TR SPRGFG G+
Sbjct: 525 ALNNLEEALKAEQKAPPGTARRKRRSESRKQFAN-SETRSSPRGFGSGN 572
>gi|356572574|ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/286 (89%), Positives = 274/286 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 277 MMDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 336
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+Q
Sbjct: 337 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQ 396
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L+ MEAMIEA
Sbjct: 397 KKIMSAKFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEA 456
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP
Sbjct: 457 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLP 516
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
LSNLE+ALK+E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 517 TLSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|356505382|ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/286 (89%), Positives = 273/286 (95%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 277 MMDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 336
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+Q
Sbjct: 337 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQ 396
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L MEAMIEA
Sbjct: 397 KKIMSAKFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLLNMEAMIEA 456
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP
Sbjct: 457 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLP 516
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
LSNLE+ALK+E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 517 TLSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|440583671|emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
angustifolius]
Length = 731
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/300 (83%), Positives = 274/300 (91%), Gaps = 14/300 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+VLNPTE+LLVVDAMTGQEAAALVTTFN+EIGITGAIL+KLDGDSRGGAAL
Sbjct: 283 MMDELKEVKQVLNPTEILLVVDAMTGQEAAALVTTFNLEIGITGAILSKLDGDSRGGAAL 342
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK++EVMQQEDAEE+Q
Sbjct: 343 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKSKEVMQQEDAEELQ 402
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQTR+VARMGS+SRVIGMIPGM K+TPAQ+R+AEK+L+I EAMIEA
Sbjct: 403 KKIMSAKFDFNDFLKQTRSVARMGSVSRVIGMIPGMAKVTPAQIRDAEKNLQITEAMIEA 462
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESP RRKRVAQDSGKTEQQVSQLVAQ+FQMRVRMKNL+GVMEGGS+P
Sbjct: 463 MTPEEREKPELLAESPERRKRVAQDSGKTEQQVSQLVAQIFQMRVRMKNLLGVMEGGSMP 522
Query: 241 ALSNLEDALKSEQK--------------APPGTARRKRRSESRRQFVDPASTRPSPRGFG 286
ALSNLE++LK+E+K APPGTARR+RR ESR+QF + S RP RGF
Sbjct: 523 ALSNLEESLKTEEKIQNLDAYLFLHSCQAPPGTARRRRRPESRKQFANSTSARPDARGFA 582
>gi|3746903|gb|AAC64109.1| signal recognition particle 54 kDa subunit precursor [Pisum
sativum]
Length = 525
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/288 (84%), Positives = 266/288 (92%), Gaps = 2/288 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+VLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 235 MMDELKEVKQVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 294
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM +EDAE+MQ
Sbjct: 295 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMLEEDAEDMQ 354
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFND LKQTRTVA+MGS+SRV+GMIPGM K+TPAQ+REAEK+L+ ME +IEA
Sbjct: 355 KKIMSAKFDFNDLLKQTRTVAKMGSVSRVLGMIPGMAKVTPAQIREAEKNLQFMEVIIEA 414
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER KPELLAE PVRRK VAQ+SGKTEQQVSQLVAQLFQMRVRMK LMGVMEGGS+P
Sbjct: 415 MTPEERGKPELLAEFPVRRKSVAQESGKTEQQVSQLVAQLFQMRVRMKKLMGVMEGGSMP 474
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPAS--TRPSPRGFG 286
LSNLE+ALK+ +KAPPGTARRK++ +R F +S + P+PRGFG
Sbjct: 475 TLSNLEEALKANKKAPPGTARRKKKGGLKRLFKGRSSKISLPAPRGFG 522
>gi|224088549|ref|XP_002308469.1| predicted protein [Populus trichocarpa]
gi|222854445|gb|EEE91992.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/254 (92%), Positives = 248/254 (97%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 288 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAAL 347
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKE+SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++Q
Sbjct: 348 SVKEISGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQ 407
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSANFDFNDFLKQTR VA+MGSM+RV+GMIPGM K+TPAQ+REAEKSLKIME MIEA
Sbjct: 408 KKIMSANFDFNDFLKQTRAVAKMGSMTRVLGMIPGMAKVTPAQIREAEKSLKIMEGMIEA 467
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEEREKPELLAESP RRKR+AQ SGKTEQQVSQLVAQLFQMRVRMKNLMG M+GGS+P
Sbjct: 468 MTPEEREKPELLAESPQRRKRIAQASGKTEQQVSQLVAQLFQMRVRMKNLMGAMDGGSIP 527
Query: 241 ALSNLEDALKSEQK 254
+LSNLEDALK+EQK
Sbjct: 528 SLSNLEDALKTEQK 541
>gi|148906612|gb|ABR16458.1| unknown [Picea sitchensis]
Length = 573
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/288 (74%), Positives = 252/288 (87%), Gaps = 2/288 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK VK+ +NPTEVLLVVDAMTGQEAAALV FN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 285 MMDELKQVKQAMNPTEVLLVVDAMTGQEAAALVAAFNLEIGITGAILTKLDGDSRGGAAL 344
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK VG+GERMEDLEPFYPDRMA RILGMGDVLSFVEKAQ+VM++E+AEE+Q
Sbjct: 345 SVREVSGKPIKFVGQGERMEDLEPFYPDRMASRILGMGDVLSFVEKAQQVMKEEEAEELQ 404
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIM + FDFNDFLKQTR +ARMGSM+RVIGMIPGMGK++ AQ+R+AEKSL+I+E+MI A
Sbjct: 405 KKIMESKFDFNDFLKQTRVIARMGSMNRVIGMIPGMGKVSSAQIRDAEKSLRIVESMINA 464
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER PELLA+SP RR+++A DSG++EQQVSQL+AQLFQMR MKN+MG M+GG+ P
Sbjct: 465 MTEEERANPELLAQSPARRRKIAVDSGRSEQQVSQLIAQLFQMRAGMKNMMGAMQGGT-P 523
Query: 241 ALSNLEDALKSEQKAPPGTA-RRKRRSESRRQFVDPASTRPSPRGFGG 287
+ NLE+ALK QK PPG A RRK R+ ++Q + AS + +PRGFG
Sbjct: 524 GIDNLEEALKVSQKVPPGMAKRRKNRTNLKKQLTNTASLQDTPRGFGA 571
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/272 (79%), Positives = 242/272 (88%), Gaps = 1/272 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 270 MMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 329
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+Q
Sbjct: 330 SVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQ 389
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI A
Sbjct: 390 KKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINA 449
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +L
Sbjct: 450 MTAEEREKPELLAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEAL 509
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
P + NL ++L +++KAPPGTARRKRR RQ
Sbjct: 510 PGMGNLMESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|218185264|gb|EEC67691.1| hypothetical protein OsI_35150 [Oryza sativa Indica Group]
Length = 550
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/272 (78%), Positives = 241/272 (88%), Gaps = 1/272 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 270 MMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 329
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+Q
Sbjct: 330 SVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQ 389
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI A
Sbjct: 390 KKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINA 449
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++SGK+E +VSQLVAQLFQMR +M+ LMGVM G +L
Sbjct: 450 MTAEEREKPELLAESRDRRIRVAEESGKSEHEVSQLVAQLFQMRAQMQKLMGVMTGQEAL 509
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
P + NL ++L +++KAPPGTARRKRR RQ
Sbjct: 510 PGMGNLMESLNADEKAPPGTARRKRRHSKTRQ 541
>gi|413924904|gb|AFW64836.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 545
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/272 (77%), Positives = 245/272 (90%), Gaps = 1/272 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 266 MMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 325
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSG+PIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+Q
Sbjct: 326 SVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQ 385
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI A
Sbjct: 386 KKIMSAKFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINA 445
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++
Sbjct: 446 MTAEEREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAI 505
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ +L D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 506 AGMGDLMDSLKSEEKAPPGTARRKRRNNTSKQ 537
>gi|413924903|gb|AFW64835.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 486
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/272 (77%), Positives = 245/272 (90%), Gaps = 1/272 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 207 MMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 266
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSG+PIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+Q
Sbjct: 267 SVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQ 326
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI A
Sbjct: 327 KKIMSAKFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINA 386
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++
Sbjct: 387 MTAEEREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAI 446
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ +L D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 447 AGMGDLMDSLKSEEKAPPGTARRKRRNNTSKQ 478
>gi|242070027|ref|XP_002450290.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
gi|241936133|gb|EES09278.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
Length = 539
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/272 (76%), Positives = 243/272 (89%), Gaps = 1/272 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 260 MMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 319
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+Q
Sbjct: 320 SVKEVSGKPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAVELQ 379
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI A
Sbjct: 380 KKIMSAKFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINA 439
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-GSL 239
MT EEREKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LM +++G ++
Sbjct: 440 MTAEEREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMSMVQGQDAI 499
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ +L D+LK+E+KAPPGTARR+RR+ +Q
Sbjct: 500 AGMGDLMDSLKAEEKAPPGTARRRRRNSKPKQ 531
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/286 (72%), Positives = 247/286 (86%), Gaps = 7/286 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 260 SIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 320 KKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINV 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P
Sbjct: 380 MTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTP 439
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSES-RRQFVDPASTRPSPRGF 285
+ L D++K+E++A GT +R+R+ + RR+ +D + RGF
Sbjct: 440 DMEGLMDSIKAEEQAAAGTGKRRRKYGNLRRRDLD------AMRGF 479
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/271 (74%), Positives = 240/271 (88%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAAL
Sbjct: 277 MMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAAL 336
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 337 SVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQ 396
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 397 KKILSAKFNFNDFLKQTQMIAQMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINV 456
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAES RRKRVA+DSGKTEQQV QLVAQLFQMR +M+ +MG ++G P
Sbjct: 457 MTPEERERPELLAESRERRKRVAKDSGKTEQQVGQLVAQLFQMRAKMQKMMGAIQGKESP 516
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ L +++K+E++A GT RR+R+ + RQ
Sbjct: 517 DMDELMESMKAEEQAAAGTGRRRRKYGNLRQ 547
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 240/271 (88%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 275 MMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAAL 334
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 335 SIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQ 394
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 395 KKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINV 454
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P
Sbjct: 455 MTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTP 514
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ L D++K+E++A GT +R+R+ + R+
Sbjct: 515 DMEGLMDSIKAEEQAAAGTGKRRRKYGNLRR 545
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 240/271 (88%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VKR +NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 275 MMSELKEVKRAVNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAAL 334
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+Q
Sbjct: 335 SIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQ 394
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 395 KKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINV 454
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE+PELLAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P
Sbjct: 455 MTPEERERPELLAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTP 514
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ L D++K+E++A GT +R+R+ + R+
Sbjct: 515 DMEGLMDSIKAEEQAAAGTGKRRRKYGNLRR 545
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 239/271 (88%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAAL
Sbjct: 274 MMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAAL 333
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDA+E+Q
Sbjct: 334 SVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDADELQ 393
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 394 KKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINV 453
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EERE+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG M+G P
Sbjct: 454 MTLEERERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMGAMQGKESP 513
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ L ++K+E+++ GT RR+R+ + RQ
Sbjct: 514 DMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 544
>gi|238009706|gb|ACR35888.1| unknown [Zea mays]
gi|413916133|gb|AFW56065.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 351
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 239/271 (88%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAAL
Sbjct: 69 MMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAAL 128
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDA+E+Q
Sbjct: 129 SVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDADELQ 188
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI
Sbjct: 189 KKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINV 248
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EERE+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG M+G P
Sbjct: 249 MTLEERERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMGAMQGKESP 308
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ L ++K+E+++ GT RR+R+ + RQ
Sbjct: 309 DMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 339
>gi|62733121|gb|AAX95238.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
Length = 1072
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/267 (77%), Positives = 234/267 (87%), Gaps = 5/267 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL
Sbjct: 260 MMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 319
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+Q
Sbjct: 320 SVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQ 379
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI A
Sbjct: 380 KKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINA 439
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +L
Sbjct: 440 MTAEEREKPELLAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEAL 499
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRS 266
P + NL ++L +++K RRKR S
Sbjct: 500 PGMGNLMESLNADEKG----WRRKRGS 522
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/270 (69%), Positives = 216/270 (80%), Gaps = 30/270 (11%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAA--------------ALVTTFNIEIGITGAI 46
MM ELK+VKR +NPTEVLLVVDAMTGQEAA ALV+TFN+EIGITGAI
Sbjct: 684 MMSELKEVKRAVNPTEVLLVVDAMTGQEAAFALRLTRISFLIWPALVSTFNVEIGITGAI 743
Query: 47 LTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK 106
LTKLDGDSRGGAALS+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEK
Sbjct: 744 LTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEK 803
Query: 107 AQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE 166
AQEVM+QEDAEE+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+RE
Sbjct: 804 AQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIRE 863
Query: 167 AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR 226
AEK+LK ME+MI MTPEERE+PELLAES RR RVA++SGK E+Q
Sbjct: 864 AEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKESGKNERQ-------------- 909
Query: 227 MKNLMGVMEGGSLPALSNLEDALKSEQKAP 256
+MG M+G P + L D++K+E++AP
Sbjct: 910 --KMMGAMQGQDTPDMEGLMDSIKAEEQAP 937
>gi|168001070|ref|XP_001753238.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695524|gb|EDQ81867.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/287 (69%), Positives = 237/287 (82%), Gaps = 1/287 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK +K+V+NPTEVLLVVDAMTGQEAA LV +FN+EIGITGAILTKLDGDSRGGAAL
Sbjct: 325 MMDELKQIKQVVNPTEVLLVVDAMTGQEAAGLVASFNLEIGITGAILTKLDGDSRGGAAL 384
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVS KPIK VG GE M LEPFYPDRMA RILGMGDVL+FVEKAQEVM +EDAE MQ
Sbjct: 385 SVKEVSNKPIKFVGEGEGMTALEPFYPDRMASRILGMGDVLTFVEKAQEVMVKEDAELMQ 444
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+IM A FDFNDFL QTR +ARMGSMS ++ +PGM K++P Q+REAEKSLKIME+MI +
Sbjct: 445 KRIMEAKFDFNDFLAQTRNLARMGSMSNIMKFLPGMNKVSPQQIREAEKSLKIMESMINS 504
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER P+LLA+SP RR+RVA SG++++QVS LVAQLFQMRVRMK+L +M+GGS+P
Sbjct: 505 MTPKERADPDLLAKSPSRRRRVANGSGRSQEQVSALVAQLFQMRVRMKSLATMMQGGSIP 564
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGG 287
+ LE+ +K +KA PGTA+RKR Q + + + SP+G GG
Sbjct: 565 GMEGLEEGMKGGRKAAPGTAKRKRSRGFASQLAE-SGAKSSPKGSGG 610
>gi|357157550|ref|XP_003577835.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 548
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 237/271 (87%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+ELK+VK+ + PTEVLLVVDAMTGQEAA+LV FN E+GITGAILTKLDGDSRGGAAL
Sbjct: 267 MMNELKEVKKAVKPTEVLLVVDAMTGQEAASLVGAFNGEVGITGAILTKLDGDSRGGAAL 326
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEVSGKPIK VGRGER+EDLEPFYPDRMA RILGMGDVLSFVE+AQ+VM+QE+AEE+Q
Sbjct: 327 SIKEVSGKPIKFVGRGERVEDLEPFYPDRMAQRILGMGDVLSFVEQAQQVMRQEEAEELQ 386
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KIMSA F+FNDFLKQT+ +++MGS SR+IGMIPGM K+TPAQ+REAEK++K ME+MI
Sbjct: 387 NKIMSAKFNFNDFLKQTKAISQMGSFSRIIGMIPGMNKVTPAQIREAEKNVKFMESMINV 446
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
M+ +ERE+PELLA S RR+RVA+DSGKTEQQVSQLV+QLF+MR RM+ +MG M+G P
Sbjct: 447 MSADERERPELLAGSRERRRRVAKDSGKTEQQVSQLVSQLFKMRARMQKMMGAMQGKDTP 506
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQ 271
+ NL +++K+E++A GT +R+R+ + R+
Sbjct: 507 DMDNLMESIKAEEQAATGTGQRRRKYGNLRR 537
>gi|302761974|ref|XP_002964409.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
gi|300168138|gb|EFJ34742.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
Length = 494
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/287 (68%), Positives = 235/287 (81%), Gaps = 2/287 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK +K+VLNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAAL
Sbjct: 206 MMDELKQMKKVLNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAAL 265
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQ
Sbjct: 266 SVREVSGKPIKFVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMVKEDAEDMQ 325
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIM A +DFND+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI A
Sbjct: 326 KKIMEAKYDFNDYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINA 385
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE PELLA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P
Sbjct: 386 MTPEEREDPELLAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAAKMQDGKMP 445
Query: 241 ALSNLEDALKSEQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 286
L +LE+ L K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 446 GLEDLEE-LSKGAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 491
>gi|302768411|ref|XP_002967625.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
gi|300164363|gb|EFJ30972.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
Length = 462
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/287 (68%), Positives = 235/287 (81%), Gaps = 2/287 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK +K+VLNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAAL
Sbjct: 174 MMDELKQMKKVLNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAAL 233
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQ
Sbjct: 234 SVQEVSGKPIKFVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMMKEDAEDMQ 293
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIM A +DFND+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI A
Sbjct: 294 KKIMEAKYDFNDYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINA 353
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE PELLA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P
Sbjct: 354 MTPEEREDPELLAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAARMQDGKMP 413
Query: 241 ALSNLEDALKSEQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 286
L +LE+ L K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 414 GLEDLEE-LSKGAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 459
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/256 (77%), Positives = 228/256 (89%), Gaps = 1/256 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK+VK+ +NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAAL
Sbjct: 270 MMVELKEVKKSVNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAAL 329
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+Q
Sbjct: 330 SVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTTELQ 389
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI A
Sbjct: 390 KKIMSAKFDFNDFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINA 449
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EE+EKPELLAES RR RVA++S KTEQ+VSQLVAQLFQMR +MK LMG+M+G ++
Sbjct: 450 MTAEEKEKPELLAESRERRIRVAEESEKTEQEVSQLVAQLFQMRAQMKKLMGMMQGQEAI 509
Query: 240 PALSNLEDALKSEQKA 255
+ +L D+L +++KA
Sbjct: 510 AGMGDLMDSLNADEKA 525
>gi|357153012|ref|XP_003576310.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 554
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/256 (77%), Positives = 228/256 (89%), Gaps = 1/256 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK+VK+ +NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAAL
Sbjct: 270 MMDELKEVKKAVNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAAL 329
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+Q
Sbjct: 330 SVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTIELQ 389
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIMSA FDFNDFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI A
Sbjct: 390 KKIMSAKFDFNDFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINA 449
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MT EEREKPELLAES RR RVA++S KTEQ+V QLVAQLFQMR +M+ LMG+M+G ++
Sbjct: 450 MTAEEREKPELLAESRERRIRVAEESEKTEQEVGQLVAQLFQMRAQMQKLMGMMQGQEAI 509
Query: 240 PALSNLEDALKSEQKA 255
+ +L D+L +++KA
Sbjct: 510 TGMGDLMDSLNADEKA 525
>gi|124359737|gb|ABN06079.1| Signal peptide binding (SRP54) M-domain [Medicago truncatula]
Length = 210
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 176/209 (84%), Positives = 197/209 (94%), Gaps = 1/209 (0%)
Query: 79 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 138
MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA FDFNDFLKQTR
Sbjct: 1 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSAKFDFNDFLKQTR 60
Query: 139 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVR 198
VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+AMTPEEREKPELLAESPVR
Sbjct: 61 AVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKAMTPEEREKPELLAESPVR 120
Query: 199 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPG 258
RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P LSNLE+ALK+E+KAPPG
Sbjct: 121 RKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEALKTEEKAPPG 180
Query: 259 TARRKRRSESRRQFVDPASTRPSPRGFGG 287
TARR++++ESRR F D ++ R PRGFG
Sbjct: 181 TARRRKKAESRRLFAD-STLRQPPRGFGS 208
>gi|425447198|ref|ZP_18827189.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
gi|389732320|emb|CCI03740.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
Length = 478
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 179/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|440756742|ref|ZP_20935942.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
gi|440172771|gb|ELP52255.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
Length = 478
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 178/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|443656730|ref|ZP_21131781.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
gi|159027605|emb|CAO86977.1| ffh [Microcystis aeruginosa PCC 7806]
gi|443333355|gb|ELS47919.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
Length = 478
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 179/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|359457209|ref|ZP_09245772.1| signal recognition particle protein [Acaryochloris sp. CCMEE 5410]
Length = 476
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 175/224 (78%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL D+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMSELADIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SIRQISGKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIM A FDF DFLKQ R + MGS+ V+ +IPGMGKI+ +Q++E E L+ EAMI +
Sbjct: 320 KKIMEAQFDFTDFLKQMRLLKNMGSLGGVMKLIPGMGKISNSQLQEGETKLQQTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT EER+ P+LL+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 380 MTKEERKNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|425437780|ref|ZP_18818194.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|425462607|ref|ZP_18842080.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
gi|389677199|emb|CCH93837.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|389824313|emb|CCI26812.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
Length = 478
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 178/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|158337260|ref|YP_001518435.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
gi|158307501|gb|ABW29118.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
Length = 476
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 174/224 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL D+K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMSELADIKKAIKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SIRQISGKPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKIM A FDF DFLKQ R + MGS+ V+ +IPGM KI+ +Q++E E LK EAMI +
Sbjct: 320 KKIMEAQFDFTDFLKQMRLLKNMGSLGGVMKLIPGMNKISNSQLQEGETKLKQTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT EER+ P+LL+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 380 MTKEERKNPQLLSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|425454517|ref|ZP_18834254.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
gi|389804798|emb|CCI15909.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
Length = 478
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 179/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELGQIKKIVNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/230 (60%), Positives = 176/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K +NP EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMGELSQIKSTVNPDEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SGKPIK +G GE++E LEPFYPDRMA RIL MGD++S VEKAQE + D E+MQ
Sbjct: 260 SVRTISGKPIKFIGVGEKVEALEPFYPDRMASRILNMGDIVSLVEKAQEELDIGDVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+M A FDFNDFLKQ R + MGS + V+ +IPGM KI + + E LKI E++I +
Sbjct: 320 RKMMEAKFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKIGAGALEKGESQLKITESIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE PELLA+SP RR+R+AQ SG E++VS+L++ +MR M+ +
Sbjct: 380 MTKQERENPELLAKSPSRRRRIAQGSGHQEKEVSRLISDFTRMRSMMQQM 429
>gi|422301683|ref|ZP_16389048.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
gi|425440580|ref|ZP_18820878.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389718934|emb|CCH97164.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389789195|emb|CCI14703.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
Length = 478
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 178/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|332705584|ref|ZP_08425660.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
gi|332355376|gb|EGJ34840.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
Length = 479
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/241 (58%), Positives = 183/241 (75%), Gaps = 4/241 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVDAMTGQEAA L TF+ +IGITGAIL+KLDGDSRGGAAL
Sbjct: 200 MMGELSRIKETVQPHDTLLVVDAMTGQEAATLTRTFHEQIGITGAILSKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDIADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K++ A FDF+DFLKQ R + MGS+ ++ ++PGMGK++ +Q+++ E LK EAMI +
Sbjct: 320 QKMLEAKFDFSDFLKQMRLLKNMGSLGGLMKLVPGMGKLSSSQLQQGETKLKQSEAMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER P+LLA SP RR+R+AQ SG TE+ V LV++ RM++LM M G +P
Sbjct: 380 MTSEERRNPDLLASSPSRRRRIAQGSGHTEKDVRGLVSEF----TRMRSLMQQMGQGQMP 435
Query: 241 A 241
A
Sbjct: 436 A 436
>gi|425451260|ref|ZP_18831082.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
gi|389767641|emb|CCI07099.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
Length = 478
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 177/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVKPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRSMMQQM 429
>gi|166368109|ref|YP_001660382.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
gi|166090482|dbj|BAG05190.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
Length = 478
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 177/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|425470966|ref|ZP_18849826.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
gi|389883283|emb|CCI36344.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
Length = 478
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 177/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|254414856|ref|ZP_05028620.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178345|gb|EDX73345.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 486
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 179/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P EVLLVVDAMTGQEAA L TFN +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELAQIKDNVKPDEVLLVVDAMTGQEAATLTHTFNQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDMADAAQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++A FDF+DFLKQ R + MGS+ ++ ++PGMGK++ Q+ + E LK EAMI +
Sbjct: 320 EKMLNAQFDFSDFLKQMRLLKNMGSLGGLMKLMPGMGKLSSDQLEKGEGKLKQTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA SP RR+R+A+ SG +E++VS L+++ +MR MK +
Sbjct: 380 MTAEERRNPDLLAGSPSRRRRIARGSGHSEREVSSLISEFTKMRSLMKQM 429
>gi|254421926|ref|ZP_05035644.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
gi|196189415|gb|EDX84379.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
Length = 491
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 147/240 (61%), Positives = 186/240 (77%), Gaps = 5/240 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK V P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELAQVKEVAQPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q
Sbjct: 260 SVRRISGQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+KI+SA FDFNDFLKQTR + MGS++ ++ MIPGMG K++ Q+++ E+ LK EAMI
Sbjct: 320 EKILSAKFDFNDFLKQTRLMKNMGSLAGIMKMIPGMGNKLSSDQLQQGEQQLKRCEAMIN 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MT EER+ PE+L+ SP RR+RVA+ +G E+ V +LV+ FQ RM+ LM M G++
Sbjct: 380 SMTMEERQNPEVLSGSPSRRRRVAKGAGYAEKDVGKLVSD-FQ---RMRGLMQQMGQGNM 435
>gi|428301996|ref|YP_007140302.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
gi|428238540|gb|AFZ04330.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
Length = 487
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 140/230 (60%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E+LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELAQIKATVQPHEILLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ +I MIPGM K+T Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQLRLLKNMGSLGGIIKMIPGMNKLTDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+RVA SG E VS+LV+ +MR M+ +
Sbjct: 380 MTQQERRDPDLLASSPSRRRRVAGGSGYKENDVSKLVSDFQRMRGMMQQM 429
>gi|425464792|ref|ZP_18844102.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
gi|389833087|emb|CCI22684.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
Length = 478
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 176/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+++ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKKIVKPDDTLLVVDAMTGQEAANLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|390437797|ref|ZP_10226315.1| Signal recognition particle protein [Microcystis sp. T1-4]
gi|389838790|emb|CCI30439.1| Signal recognition particle protein [Microcystis sp. T1-4]
Length = 478
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 177/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM +L +K+++ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGQLAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +
Sbjct: 320 AKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|427709147|ref|YP_007051524.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
gi|427361652|gb|AFY44374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
Length = 491
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGIGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER+ P+LLA SP RR+RVA SG E +S+LV+ +MR M+ +
Sbjct: 380 MTKQERQDPDLLASSPSRRRRVASGSGYKEADISKLVSDFQKMRSLMQQM 429
>gi|427418338|ref|ZP_18908521.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
gi|425761051|gb|EKV01904.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
Length = 493
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 180/229 (78%), Gaps = 1/229 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ +K ++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELEQIKTAISPDEVLLVVDAMTGQEAATLTQTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q
Sbjct: 260 SIRQISGKPIKFIGIGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KI+ A FDFNDFLKQTR + MGS++ ++ +IPGM K++ Q+++ E L+ EAMI
Sbjct: 320 AKILEARFDFNDFLKQTRLMKNMGSLTGIMKLIPGMSNKLSADQLQQGETQLRRCEAMIN 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MT +ERE P+LLA SP RR+R+A+ SG ++ VS+LV+ +MR MK
Sbjct: 380 SMTKQEREDPDLLANSPGRRRRIAKGSGYNDKDVSKLVSDFQKMRSMMK 428
>gi|427713289|ref|YP_007061913.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
gi|427377418|gb|AFY61370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
Length = 480
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 174/224 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL D+K+ + P EVLLVVDAMTGQEAA L F+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELGDIKKTVTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE M
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDFNDFLKQTR + MGS+ ++ +IPGMGKI+ Q+ + E LK E+MI +
Sbjct: 320 RKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT +ERE P+LLA SP R+KRVAQ SG + V++LV+ +MR
Sbjct: 380 MTRQERENPQLLANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMR 423
>gi|427730772|ref|YP_007077009.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
gi|427366691|gb|AFY49412.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
Length = 489
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKATVQPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK E+MI +
Sbjct: 320 EKILSAKFDFTDFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 380 MTAQERRDPDLLASSPNRRRRIANGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|428317311|ref|YP_007115193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
gi|428240991|gb|AFZ06777.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
Length = 482
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELGRIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++A FDF DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +
Sbjct: 320 QKMLTAKFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER PELLA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 380 MTVEERRNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|334117488|ref|ZP_08491579.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
gi|333460597|gb|EGK89205.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
Length = 482
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+ + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELGRIKQTVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++A FDF DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +
Sbjct: 320 EKMLTAKFDFTDFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER PELLA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 380 MTVEERRNPELLASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|434392620|ref|YP_007127567.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
gi|428264461|gb|AFZ30407.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
Length = 484
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P EVLLVVDAMTGQEAA L TF+ EIGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELAQIKETVQPHEVLLVVDAMTGQEAANLTRTFHDEIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KIM+A FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKIMAAKFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKLSEDQLKQGETQLKRAEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RRKR+A SG E V++LV +MR M+ +
Sbjct: 380 MTAQERRDPDLLASSPSRRKRIANGSGYKEADVNKLVGDFQKMRSLMQQM 429
>gi|411120536|ref|ZP_11392908.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
gi|410709205|gb|EKQ66720.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
Length = 487
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/239 (58%), Positives = 182/239 (76%), Gaps = 4/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELAQIKEAVQPHEVLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKA+E + +AE+MQ
Sbjct: 260 SVRQISGQPIKFIGTGEKVEALQPFYPDRMASRILGMGDVLTLVEKAREEVDLVEAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ + E LK E+MI +
Sbjct: 320 EKILSAKFDFTDFLKQTRLLKTMGSLGGIMKLIPGMNKISSDQLEKGESELKKAESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MTPEER+ P+LLA SP RR+R+A+ SG E VS LV + FQ +M+N+M +M G
Sbjct: 380 MTPEERKNPDLLASSPSRRRRIARGSGYREADVSDLVNK-FQ---KMRNMMQMMGKGQF 434
>gi|427716938|ref|YP_007064932.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
gi|427349374|gb|AFY32098.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
Length = 485
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 172/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ +I MIPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQLRMLKNMGSLGGLIKMIPGMNKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E VS+LVA +MR M+ +
Sbjct: 380 MTRQERHDPDLLASSPSRRRRIASGSGYRESDVSKLVADFQKMRSLMQQM 429
>gi|119510257|ref|ZP_01629394.1| signal recognition particle protein [Nodularia spumigena CCY9414]
gi|119465106|gb|EAW46006.1| signal recognition particle protein [Nodularia spumigena CCY9414]
Length = 490
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 180/241 (74%), Gaps = 4/241 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELARIKATVQPHETLLVVDSMTGQEAANLTRTFHDKIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVLS VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLSLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+SA FDFNDF+KQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +
Sbjct: 320 DKILSAKFDFNDFVKQLRMLKNMGSLGGIMKLIPGMNKISDEQLKQGETQLKRCESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ P+LLA SP RR+R+A+ SG E VS+LVA FQ +M+ LM M G +P
Sbjct: 380 MTRQERQDPDLLASSPSRRRRIAKGSGYREPDVSKLVAD-FQ---KMRTLMQQMGQGQMP 435
Query: 241 A 241
A
Sbjct: 436 A 436
>gi|354565512|ref|ZP_08984687.1| signal recognition particle protein [Fischerella sp. JSC-11]
gi|353549471|gb|EHC18913.1| signal recognition particle protein [Fischerella sp. JSC-11]
Length = 486
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K V+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKEVVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRRISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI++A FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKILAAKFDFTDFLKQLRLLKNMGSLGGILKLIPGMNKLSSDQLQQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P+LLA SP RR+R+A SG E VS+LV+ +MR M+ +
Sbjct: 380 MTQEERKNPDLLASSPSRRRRIAGGSGYKEADVSKLVSDFQKMRSLMQQM 429
>gi|428223265|ref|YP_007107435.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
gi|427996605|gb|AFY75300.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
Length = 470
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 179/228 (78%), Gaps = 1/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+ + P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELVQIKQAIAPHEVLLVVDAMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E+SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q
Sbjct: 260 SVREISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEINIADAEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF+DFLK TR + MGS ++ M+PGM KI AQ++EAE LK EAMI +
Sbjct: 320 EKILSAKFDFDDFLKNTRMMKSMGSFGGLLKMLPGM-KINDAQIKEAENQLKRCEAMISS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ER+ P+LLA+SP R++R+A+ SG Q V++LV+ +MR M+
Sbjct: 379 MTKQERQDPDLLAKSPSRKQRIAKGSGYQLQDVTKLVSDFQRMRTMMQ 426
>gi|428781665|ref|YP_007173451.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
gi|428695944|gb|AFZ52094.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
Length = 484
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/228 (60%), Positives = 176/228 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK+ ++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELIAVKKAISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK +G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ
Sbjct: 260 SVRQVSGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K++ A FDFNDFLKQ R + MGS ++ MIPGM K++ + + + E LK EAMI +
Sbjct: 320 AKMLEARFDFNDFLKQMRLLKNMGSFGSIMKMIPGMNKLSGSDIEKGETQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ERE+PELLA+SP RR+RV + SG E+ VS+LV +MR M+
Sbjct: 380 MTKQEREEPELLAKSPGRRRRVGKGSGHQEKDVSKLVEDFRKMRSMMQ 427
>gi|113476149|ref|YP_722210.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
gi|110167197|gb|ABG51737.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
Length = 483
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/263 (55%), Positives = 188/263 (71%), Gaps = 9/263 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TFN +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELARIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRRISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQTR + MGS+ ++ +IPGM KI+ ++++ E LK E+MI +
Sbjct: 320 EKILSAKFDFTDFLKQTRLMKNMGSLGGIMKLIPGMNKISDDKLQQGETQLKRCESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ PELLA+SP RR+R+A SG E+ VS+LV+ FQ RM++LM M G L
Sbjct: 380 MTRQERQNPELLAKSPSRRRRIAGGSGYAEKDVSKLVSD-FQ---RMRSLMQKMGQGDLS 435
Query: 241 -----ALSNLEDALKSEQKAPPG 258
+ + KAPPG
Sbjct: 436 GMGMPGMPGMGMPGMLGGKAPPG 458
>gi|159478459|ref|XP_001697320.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
gi|158274478|gb|EDP00260.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
Length = 549
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 203/295 (68%), Gaps = 17/295 (5%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+DVK + P++ LLVVDAMTGQEAA LV +FN + I+GAILTK+DGDSRGGAAL
Sbjct: 265 MMAELRDVKSAVRPSDTLLVVDAMTGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAAL 324
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK VG GE+ME LEPFYP+RMA RILGMGDVL+ EKA+ +++EDA++
Sbjct: 325 SVREVSGKPIKFVGVGEKMEALEPFYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTM 384
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++M FDFNDFL Q + + MG + +++ M+PG KI+ Q+ EAEK + EA+I A
Sbjct: 385 ERLMEEKFDFNDFLNQWKAMNNMGGL-QMLKMMPGFNKISEKQLYEAEKQFGVYEAIIGA 443
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEGG 237
M EER PE+L ++ RR+RVAQDSGK+E +V++L+A M+ + M L+ + + G
Sbjct: 444 MDEEERSNPEVLIKNLARRRRVAQDSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKAG 503
Query: 238 SLPALSN--LEDALKSE-QKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 289
+ P +N L++ + S +K PG RRK+ E P S RGFG S
Sbjct: 504 ADPQKANSLLQELVASAGKKVAPGKVRRKKEKE-------PLS---KARGFGSSS 548
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 176/242 (72%), Gaps = 4/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +KR P + LLVVDAMTGQEAA L TFN EIGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELSQIKRATQPHDTLLVVDAMTGQEAANLTRTFNDEIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E+M
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEELDIADLEKMH 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI A FDFNDFLKQ R + MGS+ ++ +IPGM K++ + + + E LK EAMI +
Sbjct: 320 AKITEAKFDFNDFLKQMRLLKNMGSLGGILKLIPGMNKLSNSDLAKGESQLKQTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER P+LL++SP RR+R+A+ SG E+ +S+LV RM+++M M G +P
Sbjct: 380 MTKEERSNPDLLSKSPGRRRRIAKGSGFQEKDISKLVTDF----TRMRSMMQQMSSGGMP 435
Query: 241 AL 242
AL
Sbjct: 436 AL 437
>gi|428226672|ref|YP_007110769.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
gi|427986573|gb|AFY67717.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
Length = 482
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELAQIKETVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDFNDFLKQ R + MGS+ VI +IPG+ KI+ Q+ + E LK E+MI +
Sbjct: 320 EKILEAKFDFNDFLKQMRFLKNMGSLGSVIKLIPGLNKISSEQLEQGESQLKRAESMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER P+LL+ SP RR+RVA+ SG +E+ VS+LV+ +MR M+ +
Sbjct: 380 MTKAERRNPDLLSSSPSRRQRVAKGSGHSERDVSKLVSDFQRMRAMMQQM 429
>gi|443478735|ref|ZP_21068451.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
gi|443015940|gb|ELS30714.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
Length = 477
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 184/240 (76%), Gaps = 5/240 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK VK + P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMDELKRVKDTIKPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +Q
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFTDAANLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF+DFLK TR + MGS ++ M+PGM KI AQ++EAEK LK E+MI +
Sbjct: 320 EKILKAQFDFDDFLKNTRMMKNMGSFGGMLKMLPGM-KINDAQIQEAEKQLKRCESMISS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ P+L+A+SP R++R+A +G Q V++LVA FQ +M++LM M G +P
Sbjct: 379 MTKQERKDPDLIAKSPSRKQRIANGAGYKLQDVTKLVAD-FQ---KMRSLMQQMGQGKMP 434
>gi|282899599|ref|ZP_06307563.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195478|gb|EFA70411.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
Length = 480
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/240 (58%), Positives = 180/240 (75%), Gaps = 4/240 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELSRIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ V+ +IPGM KI+ Q+++ E LK E+MI +
Sbjct: 320 EKILSARFDFTDFLKQLRLMKNMGSLGGVMKLIPGMNKISDEQLKQGETQLKRCESMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ P+LLA SP RR+R+A SG E V++LV+ FQ +M++LM M G+ P
Sbjct: 380 MTKQERKDPDLLASSPSRRRRIASGSGYKESDVTKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|16330898|ref|NP_441626.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|383322640|ref|YP_005383493.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325809|ref|YP_005386662.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491693|ref|YP_005409369.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436960|ref|YP_005651684.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|451815056|ref|YP_007451508.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|2500885|sp|P74214.1|SRP54_SYNY3 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1653392|dbj|BAA18306.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|339273992|dbj|BAK50479.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|359271959|dbj|BAL29478.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275129|dbj|BAL32647.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278299|dbj|BAL35816.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961740|dbj|BAM54980.1| signal recognition particle protein [Bacillus subtilis BEST7613]
gi|451781025|gb|AGF51994.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
Length = 482
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 173/224 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL ++K+V+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDR+A RIL MGDVL+ VEKAQE + D E++Q
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILNMGDVLTLVEKAQEAIDVGDVEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDF+DF+KQ R + MGS+ ++ MIPGM K++ + + EK LK EAMI +
Sbjct: 320 NKILEATFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSSGDIEKGEKELKRTEAMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT EER+ P+LLA+SP RR+R+AQ SG +E VS+L+ +MR
Sbjct: 380 MTTEERKNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFTKMR 423
>gi|282898237|ref|ZP_06306228.1| Signal recognition particle protein [Raphidiopsis brookii D9]
gi|281196768|gb|EFA71673.1| Signal recognition particle protein [Raphidiopsis brookii D9]
Length = 480
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 180/240 (75%), Gaps = 4/240 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELSRIKSTIEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +
Sbjct: 320 EKILSAKFDFTDFLKQLRLMKNMGSLGGMMKLIPGMNKISDEQLKKGETQLKRCESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ P+LLA SP RRKR+A SG E VS+LV+ FQ +M++LM M G+ P
Sbjct: 380 MTKKERKDPDLLASSPSRRKRIASGSGYKESDVSKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|443312631|ref|ZP_21042247.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
gi|442777350|gb|ELR87627.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
Length = 482
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 188/275 (68%), Gaps = 9/275 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMGELARIKAAVQPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K++SA FDF DFLKQ R + MGS+ ++ MIPGM K+ Q+++ E LK EAMI++
Sbjct: 320 QKMLSAKFDFTDFLKQMRLLKNMGSLGGLMKMIPGMNKLNSDQLKQGETQLKRCEAMIKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+ P++LA SP RR+R+A SG E V++LV+ +MR M+ M G P
Sbjct: 380 MTTKERKDPDILASSPSRRRRIAGGSGYKESDVAKLVSDFQKMRTMMQQ----MTQGGFP 435
Query: 241 ALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDP 275
+ + +++ P + R + DP
Sbjct: 436 GMPGMFGGMEN-----PAAVGNRPAQAGWRGYSDP 465
>gi|119488999|ref|ZP_01621934.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
gi|119454955|gb|EAW36098.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
Length = 480
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K V+ P + LLVVDAMTGQEAA L TFN +IGI+GAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKAVVQPHDTLLVVDAMTGQEAATLTQTFNEQIGISGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ +SG PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SIRRISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KIM A FDF DFLKQTR + MGS+ + +IPGM KI+ Q+ + E+ LK EAMI +
Sbjct: 320 QKIMEAKFDFTDFLKQTRLMKNMGSLGGLAKLIPGMNKISKEQLEQGEQQLKRSEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ PE+LA SP RR+R+A+ SG +E+ V +LV +MR M+ +
Sbjct: 380 MTTEERKNPEVLASSPSRRRRIAKGSGHSEKDVMRLVGDFQKMRGMMQQM 429
>gi|434398063|ref|YP_007132067.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
gi|428269160|gb|AFZ35101.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
Length = 485
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELAQIKETVQPHDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEEIDLADMENMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ V+ +IPGM KI+ A +++ E LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGMNKISGADLQKGETQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE+ PELLA+SP RR+RVA+ SG E VS+L+ +MR M+ +
Sbjct: 380 MTKEEKSNPELLAQSPSRRRRVAKGSGFEETDVSKLIKDFTRMRSLMQQM 429
>gi|17229444|ref|NP_485992.1| signal recognition particle protein [Nostoc sp. PCC 7120]
gi|17131042|dbj|BAB73651.1| signal recognition particle protein [Nostoc sp. PCC 7120]
Length = 490
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 380 MTMQERRDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|298490416|ref|YP_003720593.1| signal recognition particle protein ['Nostoc azollae' 0708]
gi|298232334|gb|ADI63470.1| signal recognition particle protein ['Nostoc azollae' 0708]
Length = 485
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELSRIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ +IPGMGK++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQLRLMKNMGSLGGIMKLIPGMGKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A +G E VS+LV +MR M+ +
Sbjct: 380 MTKQERRNPDLLASSPSRRRRIASGAGYRESDVSKLVGDFQKMRSLMQQM 429
>gi|75910555|ref|YP_324851.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
gi|75704280|gb|ABA23956.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
Length = 490
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 380 MTIQERRDPDLLASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|186683137|ref|YP_001866333.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
gi|186465589|gb|ACC81390.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
Length = 488
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKATVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRKISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ I MIPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQLRMLKNMGSLGGFIKMIPGMNKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E V++LV +MR M+ +
Sbjct: 380 MTRQERHDPDLLASSPSRRRRIAAGSGYRESDVTKLVGDFQKMRSLMQQM 429
>gi|423062554|ref|ZP_17051344.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
gi|406715889|gb|EKD11041.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
Length = 471
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG PIK VG GE++E L+PFYP+RMA RILGMGD+L+ VEKAQE DAE+MQ
Sbjct: 260 SIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAQEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +
Sbjct: 320 EKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ PELL+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 380 MTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|428776938|ref|YP_007168725.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
gi|428691217|gb|AFZ44511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
Length = 483
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/224 (60%), Positives = 172/224 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K ++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAAL
Sbjct: 200 MMQELIAIKNEISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK +G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ
Sbjct: 260 SVRQVSGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K++ A FDFNDFLKQ R + MGS V+ MIPGM K++ + + + E LK EAMI +
Sbjct: 320 AKMLEARFDFNDFLKQMRLLKNMGSFGSVMKMIPGMNKLSGSDIEKGETQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT +ERE+PELLA+SP RR+RV + SG E+ V +LV +MR
Sbjct: 380 MTKQEREEPELLAKSPSRRRRVGKGSGHQEKDVVKLVNDFTKMR 423
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELARIKATVKPDDTLLVVDAMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYP+RMA RIL MGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALQPFYPERMASRILNMGDVLTLVEKAQEELDLSDVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ ++ +IPGMGK++ + + + E LK E+MI +
Sbjct: 320 SKILQAQFDFNDFLKQMRLLKNMGSLGGLLKLIPGMGKLSGSDIAKGETELKRTESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA SP RR+R+A+ SG +E VS L+ +MR MK +
Sbjct: 380 MTKEERANPDLLASSPGRRRRIAKGSGHSESDVSNLIKNFTRMRAMMKQM 429
>gi|13123461|gb|AAK12834.1|AF238499_1 chloroplast SRP54 precursor [Chlamydomonas reinhardtii]
Length = 549
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 203/288 (70%), Gaps = 8/288 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+DVK + P++ LLVVDAMTGQEAA LV +FN + I+GAILTK+DGDSRGGAAL
Sbjct: 258 MMAELRDVKSAVRPSDTLLVVDAMTGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAAL 317
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK VG GE+ME LEPFYP+RMA RILGMGDVL+ EKA+ +++EDA++
Sbjct: 318 SVREVSGKPIKFVGVGEKMEALEPFYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTM 377
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++M FDFNDFL Q + + MG + +++ M+PG KI+ + EAEK + EA+I A
Sbjct: 378 ERLMEEKFDFNDFLNQWKAMNNMGGL-QMLKMMPGFNKISEKHLYEAEKQFGVYEAIIGA 436
Query: 181 MTPEEREKPELLAES-PVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEG 236
M EER PE+L ++ +RR+RVAQDSGK+E +V++L+A M+ + M L+ + +
Sbjct: 437 MDEEERSNPEVLIKNLALRRRRVAQDSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKA 496
Query: 237 GSLPALSN--LEDALKSE-QKAPPGTARRKRRSESRRQFVDPASTRPS 281
G+ P +N L++ + S +K PG RRK+ ++ Q ++ RP+
Sbjct: 497 GADPQKANSLLQELVASAGKKVAPGKVRRKKEKDALSQGSRASAHRPN 544
>gi|443324440|ref|ZP_21053193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
gi|442795959|gb|ELS05293.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
Length = 489
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 170/228 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P +VLLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELAQIKETIQPDDVLLVVDSMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE DA +MQ
Sbjct: 260 SVRQVSGQPIKFVGTGEKVEALEPFYPDRIASRILNMGDVLTLVEKAQEEFDLADAAQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KIM A FDFNDFLKQ R + MGS+ V+ +IPGM K++ A + + E LK EAMI +
Sbjct: 320 AKIMEARFDFNDFLKQMRLLKNMGSLGGVMKLIPGMNKLSGADLEKGETQLKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT ER +PELLA+SP RR+RVA SG E+ VS+L+ +MR M+
Sbjct: 380 MTKAERAEPELLAQSPSRRRRVASGSGFLERDVSKLIKDFTRMRSLMQ 427
>gi|428212117|ref|YP_007085261.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
gi|428000498|gb|AFY81341.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
Length = 476
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 167/217 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TFN EIGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELAQIKETIQPHETLLVVDAMTGQEAANLTRTFNDEIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VE+A E + DAE+MQ
Sbjct: 260 SVRQLSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVERAAEQVDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+GKI+ Q+ + E LK EAMI +
Sbjct: 320 QKILQAQFDFNDFLKQMRLMKNMGSLGGLLKMIPGVGKISDDQLSKGESQLKSAEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT +ER P+LLA SP RRKRVA+ SG + V++LV
Sbjct: 380 MTAQERVNPDLLAGSPSRRKRVARGSGHDDAAVTKLV 416
>gi|284928857|ref|YP_003421379.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
gi|284809316|gb|ADB95021.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
Length = 494
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K +NP + LLVVDAMTGQEAA L TF+ +I ITG ILTK+DGD+RGGAAL
Sbjct: 200 MMLELTQIKESINPHDTLLVVDAMTGQEAANLAQTFHEKIKITGTILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGD+L+ VEKAQE + D E++Q
Sbjct: 260 SVRKVSGQPIKFVGVGEKIEALQPFYPDRMASRILNMGDILTLVEKAQEEIDFSDMEQLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQTR + MGS S ++ M+PG+ KI + + E LK EAMI +
Sbjct: 320 SKILDAKFDFNDFLKQTRLMKSMGSFSNILKMVPGLNKINTKDIEKGENELKRTEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P+LLA+SP RR R+A+ SG +E ++S+L+ +MR M+ L
Sbjct: 380 MTLEERKDPDLLAKSPSRRYRIAKGSGYSETEISKLIKNFTRMRTMMQQL 429
>gi|257058483|ref|YP_003136371.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
gi|256588649|gb|ACU99535.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
Length = 492
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 170/224 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMVELARIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT EER+ P+LLA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 380 MTVEERKNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|218245446|ref|YP_002370817.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
gi|218165924|gb|ACK64661.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
Length = 492
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 170/224 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMVELARIKEAVKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT EER+ P+LLA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 380 MTVEERKNPDLLAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|409990172|ref|ZP_11273587.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
gi|409938960|gb|EKN80209.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
Length = 360
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAAL
Sbjct: 95 MMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAAL 154
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG PIK VG GE++E L+PFYP+RMA RILGMGD+L+ VEKA+E DAE+MQ
Sbjct: 155 SIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQ 214
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +
Sbjct: 215 EKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINS 274
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ PELL+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 275 MTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 324
>gi|291567513|dbj|BAI89785.1| signal recognition particle protein [Arthrospira platensis NIES-39]
Length = 470
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELAQIKETVQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG PIK VG GE++E L+PFYP+RMA RILGMGD+L+ VEKA+E DAE+MQ
Sbjct: 260 SIRRVSGAPIKFVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +
Sbjct: 320 EKILEAKFDFTDFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ PELL+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 380 MTIEERKNPELLSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|307151061|ref|YP_003886445.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
gi|306981289|gb|ADN13170.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
Length = 487
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P + LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELARIKATVKPHDTLLVVDSMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGD+++ VEKAQE + D E+MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILNMGDIITLVEKAQEELDLSDVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ + + MGS+ ++ +IPGMGK++ A + + E LK E+MI +
Sbjct: 320 SKILQAQFDFNDFLKQMKLLKNMGSLGGILKLIPGMGKLSGADIAKGETELKRTESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA SP RR+R+A+ SG +E VS L+ +MR M+ +
Sbjct: 380 MTAEERTNPDLLASSPSRRRRIAKGSGHSESDVSALIKNFSRMRGMMQQM 429
>gi|428200946|ref|YP_007079535.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
gi|427978378|gb|AFY75978.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
Length = 486
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K +NP + LLVVDAMTGQEAA L TF +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELARIKATVNPHDTLLVVDAMTGQEAANLTRTFQEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SVRQVSGQPIKFVGVGEKVEALQPFYPDRMASRILNMGDVLTLVEKAQEQIDIADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS+ ++ MIPG K++ + + + E LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLLKNMGSLGGLLKMIPGFNKLSGSDIEKGETELKRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA+SP RR+R+A+ SG E V++LV+ +MR M+ +
Sbjct: 380 MTTEERANPDLLAKSPNRRRRIARGSGYEESDVTKLVSNFTRMRNMMQQM 429
>gi|384245021|gb|EIE18517.1| signal recognition particle protein [Coccomyxa subellipsoidea
C-169]
Length = 489
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 188/248 (75%), Gaps = 1/248 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL++V+ + P++ LLVVDAMTGQEAA LV FN ITGAILTK+DGDSRGGAAL
Sbjct: 200 MMSELREVQATVQPSDTLLVVDAMTGQEAAGLVKAFNEAAEITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK VSGKPIK VG GE++E LEPFYPDR+A RILGMGDVL+ VEKA+ +++EDA E+
Sbjct: 260 SVKAVSGKPIKFVGTGEKLEALEPFYPDRIASRILGMGDVLTLVEKAEASIKEEDAAEIT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+++SA FDFNDFLKQ + V+ MGSM +++ M+PGM +IT Q+ EAEK K+ EA+I +
Sbjct: 320 KRMLSAKFDFNDFLKQYKMVSGMGSMGQIMKMLPGMNQITEKQLNEAEKQFKMFEALINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME-GGSL 239
MTPEER P+LLA++ RR+R+A+ +G+ E V+ ++ MR +M++L +M+ GG
Sbjct: 380 MTPEERTNPDLLAKTASRRRRIARGAGRIEVDVTNMIGTFGGMRAKMQSLSKMMKMGGGA 439
Query: 240 PALSNLED 247
P + L D
Sbjct: 440 PGMPQLSD 447
>gi|427733956|ref|YP_007053500.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
gi|427368997|gb|AFY52953.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
Length = 481
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK + P E LLVVDAMTGQEAA L TF+ +IGI+GAILTKLDGDSRGGAAL
Sbjct: 200 MMAELASVKETVQPHETLLVVDAMTGQEAANLTRTFHEKIGISGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+M
Sbjct: 260 SVRRISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K++SA FDF DFLKQ R + MGS+ ++ MIPGM KI+ Q+ + + L+ EAMI++
Sbjct: 320 EKMLSAKFDFTDFLKQLRLLKNMGSLGGIMKMIPGMNKISNEQLEQGQSQLQRCEAMIKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LLA SP RR+R+A SG E+ VS+L++ +MR M+ +
Sbjct: 380 MTKQERTDPDLLASSPSRRRRIASGSGYKEKDVSKLISDFQKMRNMMQQM 429
>gi|172038385|ref|YP_001804886.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|354554267|ref|ZP_08973572.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
gi|171699839|gb|ACB52820.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|353553946|gb|EHC23337.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
Length = 489
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 167/217 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAAL
Sbjct: 200 MMLELARVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT EER+ P++LA+SP RR+R+AQ SG E +VS+L+
Sbjct: 380 MTLEERKNPDILAKSPSRRRRIAQGSGHPEAEVSKLI 416
>gi|428219543|ref|YP_007104008.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
gi|427991325|gb|AFY71580.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
Length = 472
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 183/238 (76%), Gaps = 5/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K ++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELSQIKGAIDPDEVLLVVDAMTGQEAANLTQTFHDQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E+SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q
Sbjct: 260 SVREISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDIADAEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF+DFLKQTR + MGS ++ +IPGM KI+ Q+ +AE LK +E+MI +
Sbjct: 320 EKILEARFDFDDFLKQTRMMKNMGSFGGIMKLIPGM-KISDDQLNQAETQLKRVESMISS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
MT +ER+ P+LLA SP R++RVA+ +G Q V++LV+ FQ RM+ LM M G+
Sbjct: 379 MTKQERKDPDLLARSPGRKQRVAKGAGYKTQDVTKLVSD-FQ---RMRGLMQQMGQGN 432
>gi|67924644|ref|ZP_00518055.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|416379090|ref|ZP_11683820.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
gi|67853517|gb|EAM48865.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|357265970|gb|EHJ14666.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
Length = 488
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 167/217 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAAL
Sbjct: 200 MMLELARVKKAVNPDDTLLVVDAMTGQEAANLTRTFHEQIGVTGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSSTDIEKGEGELKRTEAMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT EER+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 380 MTLEERKNPDLLAKSPNRRRRIAKGSGHPEAEVSKLI 416
>gi|126658775|ref|ZP_01729919.1| signal recognition particle protein [Cyanothece sp. CCY0110]
gi|126619873|gb|EAZ90598.1| signal recognition particle protein [Cyanothece sp. CCY0110]
Length = 488
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 167/217 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK+ +NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAAL
Sbjct: 200 MMLELSRVKKAVNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+ A FDFNDFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +
Sbjct: 320 SKILEAKFDFNDFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT EER+ P+LLA+SP RR+R+A+ SG E +VS+L+
Sbjct: 380 MTLEERKNPDLLAKSPNRRRRIAKGSGHPETEVSKLI 416
>gi|123969017|ref|YP_001009875.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
gi|123199127|gb|ABM70768.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
Length = 498
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP E+LLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVSNPDEILLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +
Sbjct: 321 KKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAHPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|126696809|ref|YP_001091695.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
gi|126543852|gb|ABO18094.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
Length = 492
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +
Sbjct: 321 KKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|159903874|ref|YP_001551218.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
gi|159889050|gb|ABX09264.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
Length = 485
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ ++ +NP EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMDEMVRIRSAVNPDEVLLVVDSMIGQEAAELTRAFHEKVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K++SGKPIK +G GE++E LEPF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE+MQ
Sbjct: 260 SIKKISGKPIKFIGTGEKVEALEPFHPERMASRILGMGDVLTLVEKAQKEVEIADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK A+FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E+ LK +EAMI +
Sbjct: 320 KKFQEASFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMIKSGEEQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ER +PELLA P RR+RVA SG T + +++A +MR MK +
Sbjct: 380 MTPAERTQPELLAAQPSRRRRVALGSGHTPADMDKVLADFQKMRGFMKQM 429
>gi|428770653|ref|YP_007162443.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
gi|428684932|gb|AFZ54399.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
Length = 480
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 166/220 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK +NP EVLLVVD+MTGQEAA + +F+ EIGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELAQVKDAVNPDEVLLVVDSMTGQEAANVTRSFHEEIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ +SG+PIK +G GE++E LEPFYPDRMA RIL MGD+++ VEKAQE + D E+MQ
Sbjct: 260 SIRTISGQPIKFIGVGEKVEALEPFYPDRMASRILNMGDIVTLVEKAQEELDIADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+M A FDFNDFLKQ R + MGS + V+ +IPGM K+ + + E LK E MI +
Sbjct: 320 KKMMEAKFDFNDFLKQMRLLKNMGSFAGVMKLIPGMNKLGAGALEQGEVQLKRTETMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EER P+LLA+SP RR+RVA+ SG E+ VS+LV+
Sbjct: 380 MTKEERANPQLLAQSPSRRRRVAKGSGHQEKDVSRLVSDF 419
>gi|78779766|ref|YP_397878.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9312]
gi|78713265|gb|ABB50442.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. MIT 9312]
Length = 489
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +
Sbjct: 321 KKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEYQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|123966680|ref|YP_001011761.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
gi|123201046|gb|ABM72654.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
Length = 492
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVTNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +
Sbjct: 321 KKLQEATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|254525556|ref|ZP_05137608.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
gi|221536980|gb|EEE39433.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
Length = 486
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +
Sbjct: 321 RKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|170078230|ref|YP_001734868.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
gi|169885899|gb|ACA99612.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
Length = 478
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/225 (57%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK +K +NP + LLVVD+MTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELKQIKESINPDDTLLVVDSMTGQEAASLTRTFHEEIGVTGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK +G GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + D EEMQ
Sbjct: 260 SVRMISGQPIKFIGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEAVDLSDVEEMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
K++ A FDF+DFLKQ R + MGS+ ++ +IPGMG KI + + E LK +E MI
Sbjct: 320 AKLLEARFDFDDFLKQMRLLKNMGSLGGMLKLIPGMGNKIDKNMLEQGEVQLKRVETMIN 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MT EER+ P++LA++P RR R+A+ SG +E+ VS+L+A +MR
Sbjct: 380 SMTKEERKNPDVLAQTPKRRTRIAKGSGLSEKDVSKLIADFTRMR 424
>gi|157413847|ref|YP_001484713.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9215]
gi|157388422|gb|ABV51127.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9215]
Length = 492
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAAL
Sbjct: 201 MMSEMVRIKEVSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +
Sbjct: 321 RKLQEATFDFNDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|33861842|ref|NP_893403.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33640210|emb|CAE19745.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 498
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 175/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K+V P EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAAL
Sbjct: 201 MMGEMVRIKQVTKPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 261 SIRKISGKPIKFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDFNDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +
Sbjct: 321 KKLQEATFDFNDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EE++KPE+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 381 MTLEEKQKPEVLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|434407141|ref|YP_007150026.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
gi|428261396|gb|AFZ27346.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
Length = 484
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKATVQPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMGKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LL+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 380 MTKQERRDPDLLSSSPSRRRRIANGAGYRESDVSKLVADFQKMRSLMQQM 429
>gi|443316813|ref|ZP_21046243.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
gi|442783601|gb|ELR93511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
Length = 494
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K V+ P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELAQIKAVIQPHEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + D E++Q
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEAVDIADVEKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KKI+ A FDFNDF+KQ R + MGS ++ +IPGM GKI+ Q+++ E LK +EAMI
Sbjct: 320 KKIIEAKFDFNDFIKQMRLMKTMGSFGGILKLIPGMAGKISDEQLQQGEVQLKRVEAMIG 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT ER++PELL+ SP RR+R+AQ SG E+ VS+LV+ +MR M+ +
Sbjct: 380 SMTKSERQQPELLSSSPSRRRRIAQGSGYQEKDVSKLVSDFQKMRSMMQQM 430
>gi|434384585|ref|YP_007095196.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
gi|428015575|gb|AFY91669.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
Length = 466
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 166/220 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL DVK + P E+LLVVD+ GQEAA + TF+ IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMTELADVKAAIQPDEILLVVDSAIGQEAANVTMTFHDRIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DA ++
Sbjct: 260 SVRAISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEDFDIADAAKLT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDFNDF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI++
Sbjct: 320 EKIIEARFDFNDFIKQMRLLKNMGSLGGLLKMIPGMGKLSDGQLKQGEDQLKKAEAMIQS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EER P+LLA +P RR+R+A+ G E VS+L+++
Sbjct: 380 MTKEERGNPDLLASTPSRRRRIAKGCGYNESDVSKLISEF 419
>gi|427725123|ref|YP_007072400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
gi|427356843|gb|AFY39566.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
Length = 481
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 170/225 (75%), Gaps = 1/225 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK +K + P + LLVVDAMTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAAL
Sbjct: 200 MMGELKQIKDTIQPDDTLLVVDAMTGQEAASLTRTFHTEIGVTGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK +G GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D EEMQ
Sbjct: 260 SVRTISGQPIKFIGVGEKVEALDPFYPDRMASRILNMGDVLTLVEKAQEAIDLSDVEEMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
K++ A FDF+DF+KQ R + MGS+ ++ +IPGMG K+ + + E LK +E MI
Sbjct: 320 SKLLEARFDFDDFVKQMRLLKNMGSLGGLMKLIPGMGSKLDSGMLEQGEAQLKRVEIMIN 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MT EER+ P+LLA++P RR R+A+ SG +++ VS+L+ +MR
Sbjct: 380 SMTKEERKNPDLLAQTPKRRTRIAKGSGMSDKDVSKLITDFTRMR 424
>gi|86607761|ref|YP_476523.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556303|gb|ABD01260.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 487
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 171/224 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ +K + P E+LLVVDAM GQEAA+L F+ +GITGAILTKLDGD+RGGAAL
Sbjct: 199 MMAELERIKAAVQPHEILLVVDAMIGQEAASLTRAFHERLGITGAILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M
Sbjct: 259 SIRQVSGQPIKFIGVGEKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAASMA 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+M+A FDF DFLKQ R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +
Sbjct: 319 EKMMTAQFDFTDFLKQMRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MTPEER P+LLA S R++RVA+ SG + VS+LV+ +MR
Sbjct: 379 MTPEERRNPDLLARSVSRKRRVARGSGHKLEDVSRLVSDFQRMR 422
>gi|428312529|ref|YP_007123506.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
gi|428254141|gb|AFZ20100.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
Length = 481
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 179/230 (77%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K+ + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELARIKQTVQPHETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ VSG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRRVSGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++A FDF+DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EA+I +
Sbjct: 320 EKMLTAKFDFSDFLKQMRLLKNMGSLGGLMKMIPGMGKLSADQLQQGETKLKQSEALINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+LLA SP RR+R+A+ +G TE+ V+ LV++ +MR M+ +
Sbjct: 380 MTAEERRNPDLLASSPSRRRRIARGAGYTERDVTNLVSEFTKMRNLMQQM 429
>gi|414078759|ref|YP_006998077.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|280987222|gb|ADA00385.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|413972175|gb|AFW96264.1| signal recognition particle protein SRP [Anabaena sp. 90]
Length = 482
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 173/228 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K V+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKEVVQPDETLLVVDAMTGQEAANLTRTFHNQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSEDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ER P+LL+ SP RR+R+A SG E VS+LVA +MR M+
Sbjct: 380 MTGKERRDPDLLSSSPSRRRRIASGSGYREADVSKLVADFQKMRSLMQ 427
>gi|2500884|sp|Q55311.1|SRP54_SYNE7 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1279743|emb|CAA63054.1| signal sequence binding protein [Synechococcus elongatus PCC 7942]
Length = 485
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL VK + P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG+PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ
Sbjct: 260 SIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI++A FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI
Sbjct: 320 EKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMIN 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTE 210
+MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 380 SMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 410
>gi|81300580|ref|YP_400788.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
gi|2126515|pir||S68160 probable RNA binding protein ffh - Synechococcus sp. (strain PCC
7942)
gi|81169461|gb|ABB57801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
Length = 496
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL VK + P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAAL
Sbjct: 211 MMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAAL 270
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG+PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ
Sbjct: 271 SIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQ 330
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI++A FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI
Sbjct: 331 EKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMIN 390
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTE 210
+MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 391 SMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|428305921|ref|YP_007142746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
gi|428247456|gb|AFZ13236.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
Length = 482
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 180/242 (74%), Gaps = 4/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K ++ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAAL
Sbjct: 200 MMGELARIKEIVQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ
Sbjct: 260 SVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLVDAAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+MSA FDF DFLKQ R + MGS+ ++ MIPGMGK++ Q+ + E LK E+MI +
Sbjct: 320 EKMMSAKFDFTDFLKQMRLLKNMGSLGGMLKMIPGMGKLSNEQLSQGETQLKRAESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER P+LL+ SP RR+RVA+ G E VS+LV+ +MR +LM M G++P
Sbjct: 380 MTKEERGNPDLLSSSPSRRRRVARGCGYGESDVSKLVSDFTKMR----SLMQQMSQGAMP 435
Query: 241 AL 242
++
Sbjct: 436 SM 437
>gi|86605764|ref|YP_474527.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
gi|86554306|gb|ABC99264.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
Length = 483
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/242 (55%), Positives = 177/242 (73%), Gaps = 4/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ +K + P E+LLVVDAM GQEAA L F+ +G+TG ILTKLDGDSRGGAAL
Sbjct: 199 MMAELERIKAAVQPHEILLVVDAMIGQEAANLTQAFHERLGLTGTILTKLDGDSRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK VG GE++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M
Sbjct: 259 SIRQVSGQPIKFVGVGEKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAARMA 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+M+A FDF DFLKQ R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +
Sbjct: 319 EKMMTAQFDFTDFLKQMRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P+LLA S R++RVA SG + VS+LV+ FQ RM+++M M G L
Sbjct: 379 MTPEERRNPDLLARSVSRKRRVALGSGHKLEDVSRLVSD-FQ---RMRDMMRSMSLGGLA 434
Query: 241 AL 242
+
Sbjct: 435 GM 436
>gi|22299516|ref|NP_682763.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
gi|22295699|dbj|BAC09525.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
Length = 469
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L F+ ++GITGAILTKLDGD+RGGAAL
Sbjct: 200 MMAELAAIKEGVQPHETLLVVDAMTGQEAANLTRAFHEQVGITGAILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++VSG+PIK +G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE+M
Sbjct: 260 SVRQVSGQPIKFIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAEKMS 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF+DFLKQ R + MGS++ +I +IPGM KI+ Q+++ E+ LK EAMI +
Sbjct: 320 RKILEAQFDFDDFLKQLRLLKNMGSLAGIIKLIPGMNKISTEQLQQGEQQLKRAEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER PELLA SP RR+RVA+ SG V++LV+ +MR M+ +
Sbjct: 380 MTREERRNPELLASSPSRRERVAKGSGYQVADVTKLVSDFQRMRSLMQQM 429
>gi|194476608|ref|YP_002048787.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
gi|171191615|gb|ACB42577.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
Length = 481
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ +NP E+LLVVD+M GQEAA L F+ +IGITGA+LTKLDGD+RGGAAL
Sbjct: 200 MMQEMVRIRSAVNPNEILLVVDSMIGQEAAELTRAFHEQIGITGAVLTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGD+++ VEKAQE ++ D E+MQ
Sbjct: 260 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDIVTLVEKAQEEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A+FDF+DFL+Q R V RMGS+ ++ MIPGM KI +RE E LK +E+MI +
Sbjct: 320 RKLQEASFDFSDFLQQMRLVKRMGSLGGLMKMIPGMNKIDSTMLREGEAQLKRIESMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP EREKPELLA P RR R+A+ SG V +++ +MR M+ +
Sbjct: 380 MTPTEREKPELLASQPSRRGRIAKGSGHKIADVDKMLVDFQKMRGFMQQM 429
>gi|56752330|ref|YP_173031.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
gi|56687289|dbj|BAD80511.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
Length = 496
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL VK + P EVLLVVD+M GQEA +L +F+ IGITGAILTKLDGDSRGGAAL
Sbjct: 211 MMEELAQVKEAIAPHEVLLVVDSMIGQEAPSLTRSFHERIGITGAILTKLDGDSRGGAAL 270
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSG PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ
Sbjct: 271 SIRRVSGHPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQ 330
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI++A FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI
Sbjct: 331 EKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMIN 390
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTE 210
+MTP+ER P+LL+ SP RR R+A+ G+TE
Sbjct: 391 SMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 421
>gi|124026411|ref|YP_001015526.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
gi|123961479|gb|ABM76262.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
Length = 487
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K + P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMGEMVRIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 260 SIRKISGKPIKFIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
M+ EER KPELLA P RR+RVA SG V +++A +MR MK +
Sbjct: 380 MSVEERNKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|72382692|ref|YP_292047.1| signal recognition particle protein [Prochlorococcus marinus str.
NATL2A]
gi|72002542|gb|AAZ58344.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. NATL2A]
Length = 487
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K + P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMGEMVRIKEAVQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++SGKPIK +G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ
Sbjct: 260 SIRKISGKPIKFIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
M+ EER KPELLA P RR+RVA SG V +++A +MR MK +
Sbjct: 380 MSVEERNKPELLAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|220909384|ref|YP_002484695.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
gi|219865995|gb|ACL46334.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
Length = 489
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 176/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAAL
Sbjct: 200 MMAELAQIKTTIAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK +G GE++E L+PFYPDR+A R+LGMGDVL+ VEKAQE + DAE++
Sbjct: 260 SVRQISGQPIKFIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLS 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+ A FDF DFLKQTR + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +
Sbjct: 320 RKILEAKFDFTDFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP+ER PELL+ SP RR+R+A+ SG + + VS+LV+ +MR M+ +
Sbjct: 380 MTPDERRNPELLSSSPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQM 429
>gi|300867755|ref|ZP_07112400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
gi|300334338|emb|CBN57572.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
Length = 483
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAAL
Sbjct: 200 MMAELARIKETIQPHETLLVVDAMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDITDAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI++A FDF DFLKQ R + MGS+ ++ MIPG+ K++ +R+ E L+ EAMI +
Sbjct: 320 EKILTAKFDFTDFLKQMRLLKNMGSLGGILKMIPGLNKMSDDDMRKGEVQLRRTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER PELL+ SP RR+R+A+ SG E V++LV+ +MR M+ L
Sbjct: 380 MTTEERRNPELLSSSPSRRRRIAKGSGFVEADVAKLVSDFQKMRNMMQQL 429
>gi|428206885|ref|YP_007091238.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
gi|428008806|gb|AFY87369.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
Length = 487
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/224 (60%), Positives = 171/224 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL VK + P E LLVVDAMTGQEAA L TF+ ++GITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELIRVKEAVQPHETLLVVDAMTGQEAANLTRTFHEQVGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ +SG+PIK VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ
Sbjct: 260 SVRRISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+SA FDF DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +
Sbjct: 320 EKILSAKFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKMSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MT +ER+ P+LL+ SP RR+R+A+ SG E VS+LV+ +MR
Sbjct: 380 MTKQERKDPDLLSSSPSRRRRIARGSGYKESDVSKLVSDFQRMR 423
>gi|78042676|ref|YP_360266.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994791|gb|ABB13690.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 446
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 174/233 (74%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K V++P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD++GGAAL
Sbjct: 200 LMDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELGLTGVILTKLDGDTKGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE++E+LEPFYPDRMA RILGMGDVL+ +EKA+E + E A++MQ
Sbjct: 260 SVKAVTGCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVLTLIEKAKEALDAEKAQKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ S FD DFL + + +MG + +++GMIPGMGK+ EK LK +EA+I +
Sbjct: 320 EKLKSREFDLEDFLDSMQQIKKMGPLEQLLGMIPGMGKVKDIAGMVDEKELKHIEAIIYS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MTPEER KPE++ S R+KR+A+ SG + Q+V++L+ Q QM+ MK G+
Sbjct: 380 MTPEERRKPEIIDGS--RKKRIAKGSGTSIQEVNRLLKQFEQMKKLMKQFGGM 430
>gi|440681861|ref|YP_007156656.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
gi|428678980|gb|AFZ57746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
Length = 482
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 172/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAAL
Sbjct: 200 MMAELARIKSTIEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ
Sbjct: 260 SVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+SA FDF DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +
Sbjct: 320 AKILSAKFDFTDFLKQMRLLKNMGSLGGIMKMIPGMNKLSDDQLKQGETQLKRCEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER P+LL+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 380 MTRQERLDPDLLSSSPSRRRRIASGAGYREADVSKLVADFQKMRSLMQQM 429
>gi|33240809|ref|NP_875751.1| signal recognition particle protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238338|gb|AAQ00404.1| Signal recognition particle GTPase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 485
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ ++P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMNEMVRIRSAVDPDEVLLVVDSMIGQEAADLTRAFHEKVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMAGRILGMGDVL+ VEKAQ+ ++ DAE+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMAGRILGMGDVLTLVEKAQKEVEIADAEQMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K A FDF+DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +
Sbjct: 320 RKFQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKSGEDQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT E+ +PELLA P RRKRVA SG T +V +++A +MR MK +
Sbjct: 380 MTNAEQTQPELLAAQPSRRKRVAFGSGHTPVEVDKVLADFQKMRGLMKQM 429
>gi|87125498|ref|ZP_01081343.1| Signal recognition particle protein [Synechococcus sp. RS9917]
gi|86166798|gb|EAQ68060.1| Signal recognition particle protein [Synechococcus sp. RS9917]
Length = 492
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMDEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER++PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 380 MTVAERQQPELLAAQPSRRRRIASGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|78212426|ref|YP_381205.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9605]
gi|78196885|gb|ABB34650.1| signal recognition particle protein [Synechococcus sp. CC9605]
Length = 492
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 172/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 380 MTQQERENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|260435394|ref|ZP_05789364.1| signal recognition particle protein [Synechococcus sp. WH 8109]
gi|260413268|gb|EEX06564.1| signal recognition particle protein [Synechococcus sp. WH 8109]
Length = 486
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 172/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 380 MTQQERENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|412993787|emb|CCO14298.1| signal recognition particle protein [Bathycoccus prasinos]
Length = 571
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/286 (51%), Positives = 195/286 (68%), Gaps = 12/286 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL K E LLVVDAMTGQEAA L +F I ITGAILTKLDGD+RGGAAL
Sbjct: 273 LMNELIATKMSTQADETLLVVDAMTGQEAATLTKSFADAIDITGAILTKLDGDTRGGAAL 332
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK G GE+M+ L+PFYP+RM RILGMGDV+SFVEKAQE ++Q DAE+M+
Sbjct: 333 SVREVSGKPIKFTGVGEKMDALDPFYPERMTSRILGMGDVVSFVEKAQEAVKQADAEQMK 392
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KIM A FDF+DFLK + MGSMS+++ MIPG K++ ++EAEKS KI +++I +
Sbjct: 393 EKIMKATFDFDDFLKNMDMMGDMGSMSQLMKMIPGANKLSDKDMQEAEKSFKIAKSLIMS 452
Query: 181 MTPEEREKPELLAESPV---RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--E 235
MTPEER+ P++L S RR R+ + +GKTE+ +++L+ MRV+M+ + M E
Sbjct: 453 MTPEERKYPDMLVASSTAESRRNRIVKGAGKTEEDLAELIVMFGGMRVKMQQMSAAMGSE 512
Query: 236 GGSL---PALSNLE-DALKSE---QKAPPGTARRKRRSESRRQFVD 274
L P LS+ E L SE ++ PG RR + + + V+
Sbjct: 513 AAKLGLQPQLSSDEMTKLASEKVRKRIKPGHVRRNKAKKVPKSLVE 558
>gi|124023656|ref|YP_001017963.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
gi|123963942|gb|ABM78698.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
Length = 494
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 176/230 (76%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+QTR + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQTRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER++PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 380 MTADERKQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|33866152|ref|NP_897711.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
gi|33639127|emb|CAE08133.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
Length = 487
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF++Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKLDDGILKQGEQQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP+ERE P+LLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 380 MTPKERENPDLLAGQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|148240067|ref|YP_001225454.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
gi|147848606|emb|CAK24157.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
Length = 523
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 229 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 288
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 289 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 348
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 349 KKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGS 408
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE P+LLA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 409 MTQQERENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 458
>gi|113955128|ref|YP_729980.1| signal recognition particle protein [Synechococcus sp. CC9311]
gi|113882479|gb|ABI47437.1| signal recognition particle protein [Synechococcus sp. CC9311]
Length = 493
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 380 MTAAERTQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGFMQQM 429
>gi|148242807|ref|YP_001227964.1| Signal recognition particle protein [Synechococcus sp. RCC307]
gi|147851117|emb|CAK28611.1| Signal recognition particle protein [Synechococcus sp. RCC307]
Length = 493
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L +F+ ++GITGA+LTK+DGDSRGGAAL
Sbjct: 204 MMEEMVRIRSAVAPDEVLLVVDSMIGQEAADLTRSFHEQVGITGAVLTKMDGDSRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 264 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVEIADVEKMQ 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A+FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +
Sbjct: 324 RKLQEASFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEAQLKRIEAMIGS 383
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE P+LLA P RR+R+A+ SG +V +++A +MR M+ +
Sbjct: 384 MTVQERENPDLLASQPSRRRRIAKGSGHQPAEVDKMLADFQKMRGFMQQM 433
>gi|88809131|ref|ZP_01124640.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
gi|88787073|gb|EAR18231.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
Length = 489
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 173/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 320 KKLQEATFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ERE P+LLA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 380 MTQQERENPDLLAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|33862622|ref|NP_894182.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
gi|33634538|emb|CAE20524.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
Length = 497
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 174/230 (75%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRSAVEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER +PELLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 380 MTADERNQPELLASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|255070283|ref|XP_002507223.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522498|gb|ACO68481.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 568
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 196/276 (71%), Gaps = 12/276 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ K E+LLVVDAMTGQEAAAL F+ +GITGA+LTK+DGD+RGGAAL
Sbjct: 286 LMEELRATKIATAADEILLVVDAMTGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAAL 345
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK G GE+ME LEPFYP+RMA RILGMGDV++ VE+AQ+V++ E+AE+M+
Sbjct: 346 SVREVSGKPIKFTGVGEKMEALEPFYPERMASRILGMGDVVTLVERAQQVVKNEEAEQMR 405
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+SA FDFNDF+KQ + +MG M + ++PGM ++ +++EA+KSLK+ +++I +
Sbjct: 406 DKILSATFDFNDFIKQMEMMGQMGGMDGFMKLLPGMSGMSEREMQEADKSLKVAKSLILS 465
Query: 181 MTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MT +ER+ P++L A + RRKR+ + +G++E+ +SQL+ MRV+M+ + + G
Sbjct: 466 MTSKERQFPDILVAGASAKSRRKRIIEGAGRSEKDLSQLIVLFGSMRVKMQKMTAEITGA 525
Query: 238 S-----LPALSNLE-DALKSE---QKAPPGTARRKR 264
S P LS + + L +E + PG RR R
Sbjct: 526 SAEVGLTPQLSEEDMNTLANEGLRKNVSPGMVRRLR 561
>gi|329770523|ref|ZP_08261901.1| signal recognition particle protein [Gemella sanguinis M325]
gi|328836272|gb|EGF85941.1| signal recognition particle protein [Gemella sanguinis M325]
Length = 450
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 176/239 (73%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K V NP E+LLVVDAM GQEA + T+F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 199 LMDELKDIKSVSNPDEILLVVDAMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIKLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ
Sbjct: 259 SIKSITGKPIKLVGMGEKMNDLELFHPERMASRILGMGDVLTLIEKAQASIDEDEAKKMQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
+KI++ +F F DFL Q V ++GS+ ++GMIPGMGK+ + EK +EA+I+
Sbjct: 319 EKILTQSFTFEDFLSQLEQVKKLGSIKDILGMIPGMGKMKNMNLDAVDEKQFVYIEAIIK 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER+ P+++ + RRKR+AQ SG+ +V +L+ Q +MR MK G+M S
Sbjct: 379 SMTIEERQNPDII--NVPRRKRIAQGSGRPISEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|352096234|ref|ZP_08957114.1| signal recognition particle protein [Synechococcus sp. WH 8016]
gi|351676928|gb|EHA60079.1| signal recognition particle protein [Synechococcus sp. WH 8016]
Length = 496
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRGAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 380 MTEAERTQPELLAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGVMQQM 429
>gi|78185084|ref|YP_377519.1| Signal recognition particle protein [Synechococcus sp. CC9902]
gi|78169378|gb|ABB26475.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9902]
Length = 492
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMGEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VE+AQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVERAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELLA P RR+R+A SG V +++A +MR M+ +
Sbjct: 380 MTESERCQPELLASQPSRRRRIATGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|449015603|dbj|BAM79005.1| signal recognition particle SRP54 homolog ffh [Cyanidioschyzon
merolae strain 10D]
Length = 608
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 175/241 (72%), Gaps = 4/241 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +KRVL+P E+LLVVD M GQEAA + F+ IGITGAILTK+DGD+RGGAAL
Sbjct: 309 LMEELQQIKRVLSPAEILLVVDGMIGQEAANITRAFHERIGITGAILTKMDGDTRGGAAL 368
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K++SG PIK +G GE+++ LE FYPDRMA RILGMGD+++ VE+AQE + +++AE++
Sbjct: 369 SIKQISGAPIKFIGVGEKLDKLEKFYPDRMASRILGMGDIITLVERAQEAVDEKEAEQLA 428
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K++ A FDFNDFL+QTR V MGS + V+ ++PG+ G + Q+R EK L++ E++I
Sbjct: 429 RKMLEARFDFNDFLRQTRFVRSMGSFAGVLKLLPGVSGMLKEDQLRAGEKRLRLAESVIN 488
Query: 180 AMTPEEREKPELLA---ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ER P+LL + R +R+A+ SG++ +QV L+ MR M + M G
Sbjct: 489 SMTPRERANPDLLTVDKTAASRMRRIARGSGRSLEQVESLMRDFVNMRNVMAQMSRRMMG 548
Query: 237 G 237
G
Sbjct: 549 G 549
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 164/230 (71%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNAQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLEPFYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEPFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTREERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|116072341|ref|ZP_01469608.1| Signal recognition particle protein [Synechococcus sp. BL107]
gi|116064863|gb|EAU70622.1| Signal recognition particle protein [Synechococcus sp. BL107]
Length = 486
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMGEMVRIRSAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELL+ P RR+R+A SG V +++A +MR M+ +
Sbjct: 380 MTESERCQPELLSSQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|116073373|ref|ZP_01470635.1| signal recognition particle protein [Synechococcus sp. RS9916]
gi|116068678|gb|EAU74430.1| signal recognition particle protein [Synechococcus sp. RS9916]
Length = 499
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG+PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ
Sbjct: 260 SIRKVSGQPIKFMGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ A+FDF+DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +
Sbjct: 320 KKLQEASFDFSDFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELLA P RR+R+A G V +++A +MR M+ +
Sbjct: 380 MTAAERTQPELLAAQPSRRRRIAAGCGYQPADVDKVLADFQKMRGFMQQM 429
>gi|318042117|ref|ZP_07974073.1| signal recognition particle protein [Synechococcus sp. CB0101]
Length = 487
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 169/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ +P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 202 MMEEMVRIREACSPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ
Sbjct: 262 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FDF+DF++Q R + RMGS+ ++ +IPGM KI +++ E+ LK +EAMI +
Sbjct: 322 QKLQEATFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLKKIEAMISS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER P+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 382 MTEAERRDPDLLAANPSRRRRIASGSGHTSADVDKVLQNFQQMRGFMQQM 431
>gi|317969124|ref|ZP_07970514.1| signal recognition particle protein [Synechococcus sp. CB0205]
Length = 488
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 169/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 202 MMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ
Sbjct: 262 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FDF+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAM+ +
Sbjct: 322 QKLQEATFDFSDFIKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEEQLKKIEAMVGS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER P+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 382 MTEAERCDPDLLAANPSRRRRIASGSGHTPADVDKVLQNFQQMRGFMQQM 431
>gi|387219191|gb|AFJ69304.1| signal recognition particle subunit SRP54, partial [Nannochloropsis
gaditana CCMP526]
Length = 604
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 190/290 (65%), Gaps = 24/290 (8%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+K VK + P EVLLVVDAMTGQEAA + FN EIG+TGAILTKLDGD+RGGAAL
Sbjct: 292 LMKEIKGVKTAVKPDEVLLVVDAMTGQEAATVTARFNDEIGLTGAILTKLDGDTRGGAAL 351
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ VSGKPIK +G GE +E LEPFYPDRMA RILGMGDV+S VEKAQ+ + Q+DA +
Sbjct: 352 SVRGVSGKPIKFIGVGETLEKLEPFYPDRMASRILGMGDVVSLVEKAQDEINQDDAMAIF 411
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+M+ FDF+DF+ QTR +++MGS+S ++ MIPGM + P + E EK L + MI
Sbjct: 412 KKMMTGTFDFDDFMTQTRMISKMGSLSGMMKMIPGMAGVLPGDAMYEGEKKLFAYQEMIN 471
Query: 180 AMTPEEREKPELLAESP---VRRKRVAQDSGKT-------EQQVSQLVAQLFQMRVRMKN 229
M PEER+ P++L ++P +R KR+ ++SG++ +++ S L + +M R+
Sbjct: 472 VMEPEERKDPKMLLDNPGADLRWKRIVEESGRSMEEAKNFQREFSNLRLMMTRMSSRLSE 531
Query: 230 LMGV---------MEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRR 270
G ++ +L L A+ S+ + ARRK +SRR
Sbjct: 532 KTGFDPSKGKDAAIDESALQELDMKNLAMMSQNR----QARRKLEKQSRR 577
>gi|145341290|ref|XP_001415746.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144575969|gb|ABO94038.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 185/276 (67%), Gaps = 12/276 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK K + E LLVVDAMTGQEAA L +FN + ITGAILTK+DGD+RGGAAL
Sbjct: 207 LMGELKATKEATSADETLLVVDAMTGQEAATLTASFNEAVEITGAILTKMDGDTRGGAAL 266
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK G GE+M+ LEPFYP+RM RILGMGD++S VEK Q +++E+AE+++
Sbjct: 267 SVREVSGKPIKFTGVGEKMDALEPFYPERMTSRILGMGDIVSLVEKVQAGVKEEEAEKIK 326
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KIMSA FDFNDF+ Q + MG M +++ M+PG K++ A + A KS+ I +++I +
Sbjct: 327 QKIMSATFDFNDFVGQLEMMNNMGGMKQIMQMMPGTAKLSEADMEAAGKSMTIAKSLINS 386
Query: 181 MTPEEREKPELLAESPV---RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG- 236
MT EER+ P++L S RR+R+ + SG+TE ++QL+ MR +M+ + G + G
Sbjct: 387 MTKEERQYPDMLVASTTADSRRQRIVKGSGRTEADLAQLIMMFGGMRTQMQKMSGQLGGQ 446
Query: 237 ----GSLPALSNLEDAL----KSEQKAPPGTARRKR 264
G P LS E + K + PG RR++
Sbjct: 447 AGDVGLQPQLSEAELSKLAMNKIRKTVKPGMVRRQK 482
>gi|376006521|ref|ZP_09783775.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
(fragment) [Arthrospira sp. PCC 8005]
gi|375325103|emb|CCE19528.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
(fragment) [Arthrospira sp. PCC 8005]
Length = 249
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 155/207 (74%)
Query: 24 MTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLE 83
MTGQEAA L TFN IGITGAILTK+DGDSRGGAALS++ VSG PIK VG GE++E L+
Sbjct: 1 MTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQ 60
Query: 84 PFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARM 143
PFYP+RMA RILGMGD+L+ VEKAQE DAE+MQ+KI+ A FDF DFLKQTR + M
Sbjct: 61 PFYPERMASRILGMGDILTLVEKAQEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNM 120
Query: 144 GSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVA 203
GS+ ++ +IPGM KI+ Q+ E LK EAMI +MT EER+ PELL+ SP RRKRVA
Sbjct: 121 GSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVA 180
Query: 204 QDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+ +G E+ V +LV+ +MR M+ +
Sbjct: 181 KGAGYAEKDVMRLVSDFQRMRSLMQQM 207
>gi|254432051|ref|ZP_05045754.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
gi|197626504|gb|EDY39063.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
Length = 494
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 171/230 (74%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 202 MMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D MQ
Sbjct: 262 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVARMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A+FDF+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ L +E+MI +
Sbjct: 322 QKLQEASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLGKIESMISS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ERE P+LLA P RR+R+A+ SG T +V +++A +MR M+ +
Sbjct: 382 MTAAERENPDLLALMPSRRRRIAKGSGHTPAEVDKVLADFQRMRGFMQQM 431
>gi|427702484|ref|YP_007045706.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
gi|427345652|gb|AFY28365.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
Length = 496
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 168/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAAL
Sbjct: 200 MMGEMVRIREAAAPDEVLLVVDSMIGQEAADLTRAFHEQVGITGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D E+MQ
Sbjct: 260 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKATKEVELADVEKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A+FDF+DF++Q R + RMGS+ ++ +IPGM KI +R+ E LK +EAMI +
Sbjct: 320 RKLQEASFDFSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLRQGESQLKRIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER +PELLA P RR+R+A SG T V +++A +MR M+ +
Sbjct: 380 MTEAERRQPELLAAQPSRRRRIAAGSGHTPADVDKVLADFQKMRGFMQQM 429
>gi|317495250|ref|ZP_07953620.1| signal recognition particle protein [Gemella morbillorum M424]
gi|316914672|gb|EFV36148.1| signal recognition particle protein [Gemella morbillorum M424]
Length = 450
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 174/239 (72%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K +NP E+LLVVDAM GQEA + T+F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 199 LMDELKDIKSAVNPDEILLVVDAMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIKLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ
Sbjct: 259 SIKSITGKPIKLVGMGEKMNDLELFHPERMASRILGMGDVLTLIEKAQANIDEDEAKKMQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
+K+++ +F F DFL Q V ++GS ++GMIPGMGK+ + EK +EA+I+
Sbjct: 319 EKLLNQSFTFEDFLSQLEQVKKLGSFKDILGMIPGMGKMKNMNLDAVDEKQFVYVEAIIK 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER+ P+++ + RRKR+A SG+ +V +L+ Q +MR MK G+M S
Sbjct: 379 SMTIEERQNPDII--NVPRRKRIAAGSGRPISEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|329766980|ref|ZP_08258508.1| signal recognition particle protein [Gemella haemolysans M341]
gi|328837705|gb|EGF87330.1| signal recognition particle protein [Gemella haemolysans M341]
Length = 450
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 174/239 (72%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K P E+LLV+DAM GQEA + ++F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 199 LMDELKDIKAATTPDEILLVIDAMIGQEAVNIASSFDEQLDITGLVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIKLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ
Sbjct: 259 SIKSITGKPIKLVGMGEKMNDLEIFHPERMASRILGMGDVLTLIEKAQASIDEDEAKKMQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
+KI++ +F F DFL Q V ++GS+ ++GMIPGMGK+ + EK +EA+I+
Sbjct: 319 EKILNQSFTFEDFLTQLEQVKKLGSLKDILGMIPGMGKLKNMNLDAVDEKQFVYIEAIIK 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER+ P+++ + RRKR+AQ SG+ +V +L+ Q +MR MK G+M S
Sbjct: 379 SMTIEERQNPDII--NVPRRKRIAQGSGRPINEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|241890047|ref|ZP_04777345.1| signal recognition particle protein [Gemella haemolysans ATCC
10379]
gi|241863669|gb|EER68053.1| signal recognition particle protein [Gemella haemolysans ATCC
10379]
Length = 450
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 174/239 (72%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K P E+LLVVD+M GQEA + T+F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 199 LMDELKNIKAATTPDEILLVVDSMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIKLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ
Sbjct: 259 SIKSITGKPIKLVGMGEKMNDLELFHPERMASRILGMGDVLTLIEKAQASIDEDEAKKMQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
+KI++ +F F DFL Q V ++GS+ ++GMIPGMGK+ + EK +EA+I+
Sbjct: 319 EKILNQSFTFEDFLTQLEQVKKLGSLKDILGMIPGMGKLKNMNLDAVDEKQFVYIEAIIK 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER+ P+++ + RRKR+AQ SG+ +V +L+ Q +MR MK G+M S
Sbjct: 379 SMTIEERQNPDII--NVPRRKRIAQGSGRPLNEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 163/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNDQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGDVL+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVLTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|303273580|ref|XP_003056150.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462234|gb|EEH59526.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 559
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 191/280 (68%), Gaps = 12/280 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL K E LLVVDAMTGQEAA+L FN +GITGA+LTK+DGD+RGGAAL
Sbjct: 278 LMAELLATKAATRADETLLVVDAMTGQEAASLTAAFNDAVGITGAVLTKMDGDTRGGAAL 337
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EVSGKPIK +G GE+++ LEPF+P+RM RILGMGDV+S VE+AQ +++E A M+
Sbjct: 338 SVREVSGKPIKFIGSGEKLDALEPFFPERMTTRILGMGDVVSLVERAQVAVKEEQANLMR 397
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI+SA FDFNDFL Q + +MG M + M+PGM ++ ++++AEKSL + +++I +
Sbjct: 398 DKILSATFDFNDFLSQLEMMGKMGGMGGLTKMMPGMNTMSDKELQDAEKSLSVAKSLIMS 457
Query: 181 MTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG- 236
MTP ER+ P+LL + + RR RV + SG++++ ++ L+ MRV+M++L M G
Sbjct: 458 MTPRERQFPDLLVAGSSAASRRGRVVEGSGRSDKDLANLIVMFGSMRVKMQSLSAQMNGT 517
Query: 237 ----GSLPALSNLE-DALKSE---QKAPPGTARRKRRSES 268
G +P LS ++ + L E ++ PG RR++ + S
Sbjct: 518 AKEVGLVPQLSEVDLNKLAFEGVGKRVSPGMVRRRKLNAS 557
>gi|87301099|ref|ZP_01083940.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
gi|87284067|gb|EAQ76020.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
Length = 492
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 170/230 (73%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +++ P EVLLVVD+M GQEAA L F+ ++G+TGA+LTKLDGDSRGGAAL
Sbjct: 200 MMEEMVRIRQAAAPDEVLLVVDSMIGQEAAELTRAFHEQVGLTGAVLTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++VSG PIK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D +MQ
Sbjct: 260 SIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKASKEVELADVAKMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A+FDF+DFL+Q R + RMGS+ ++ +IPGM KI +++ E+ L +EAMI +
Sbjct: 320 QKLQEASFDFSDFLQQMRMIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLGKIEAMIGS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ERE+P+LLA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 380 MTAAEREQPQLLAAQPSRRRRIAAGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|315917604|ref|ZP_07913844.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|313691479|gb|EFS28314.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 449
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 177/245 (72%), Gaps = 8/245 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELRNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ ++
Sbjct: 260 SIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P
Sbjct: 378 MTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMP 431
Query: 241 ALSNL 245
NL
Sbjct: 432 NFPNL 436
>gi|340749889|ref|ZP_08686736.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
gi|229419531|gb|EEO34578.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
Length = 449
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 176/242 (72%), Gaps = 8/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++KR+ P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMDELKEIKRLTRPQEILLVVDAMIGQDAVNLAESFNNVLNIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK VG GE+++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ ++
Sbjct: 260 SIKAVVGKPIKFVGVGEKIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD +DFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLDDFLKQLQNIKKLGSLGSILKMIPGMGQI--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P
Sbjct: 378 MTKEERKKPEILKAS--RKQRIAKGSGTEVADINRLLKQFEQMKAMMK----MFSGGKIP 431
Query: 241 AL 242
+L
Sbjct: 432 SL 433
>gi|317059129|ref|ZP_07923614.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
gi|313684805|gb|EFS21640.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
Length = 449
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 177/245 (72%), Gaps = 8/245 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELRNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ ++
Sbjct: 260 SIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P
Sbjct: 378 MTKQERKKPEILKAS--RKQRIARGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMP 431
Query: 241 ALSNL 245
NL
Sbjct: 432 NFPNL 436
>gi|294783942|ref|ZP_06749264.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
gi|294479754|gb|EFG27533.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
Length = 444
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMNELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G
Sbjct: 378 MTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGG 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|312793157|ref|YP_004026080.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996632|ref|YP_004798975.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180297|gb|ADQ40467.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964851|gb|AEM73998.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 443
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELVSIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKKMMKQF 427
>gi|312127973|ref|YP_003992847.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777992|gb|ADQ07478.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 443
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELVSIKNAIKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|340754117|ref|ZP_08690884.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|358465943|ref|ZP_09175824.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|422317421|ref|ZP_16398777.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
gi|229423656|gb|EEO38703.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|357069550|gb|EHI79447.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|404589799|gb|EKA92378.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
Length = 444
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMNELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G
Sbjct: 378 MTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGG 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|262065932|ref|ZP_06025544.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
gi|291380412|gb|EFE87930.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
Length = 444
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMNELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK NL G
Sbjct: 378 MTIEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGG 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|421527575|ref|ZP_15974173.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
gi|402256254|gb|EJU06738.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
Length = 444
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+V+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKVIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGV 233
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGA 435
Query: 234 M-EGGSLP 240
M +GG P
Sbjct: 436 MGKGGKFP 443
>gi|222528961|ref|YP_002572843.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455808|gb|ACM60070.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 443
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELVAIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MGS+S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGSLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|269124183|ref|YP_003306760.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
gi|268315509|gb|ACZ01883.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
Length = 443
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 170/245 (69%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK +NPTE+LLVVD MTGQ+A + TFN + ITG ++TKLDGD+RGGAAL
Sbjct: 200 LMQELQDVKSSVNPTEILLVVDGMTGQDAVNVAKTFNDVLDITGVVVTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KE+SGKPIK + GE+++D+ F+P+R+A RILGMGDV+S VEKA+E + +++A EM+
Sbjct: 260 SIKEISGKPIKYISEGEKLDDIAVFHPERLASRILGMGDVVSLVEKAKEAIDEKEAREME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K FDF DFLKQ + + RMGS+ ++ M+PGMG + + AEK +K +EA+I +
Sbjct: 320 AKFRKNQFDFEDFLKQFKMIKRMGSLGGILKMLPGMGALGDIDLTGAEKEMKKVEAIIYS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER P LL S R+ R+A+ SG QV++L+ Q Q MK +M + G++P
Sbjct: 380 MTVEERRNPNLLKVSS-RKIRIAKGSGTDVTQVNKLLKQFEQ----MKQMMKMFNSGNIP 434
Query: 241 ALSNL 245
+
Sbjct: 435 GFGQI 439
>gi|336400339|ref|ZP_08581118.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
gi|336162527|gb|EGN65491.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
Length = 443
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 176/247 (71%), Gaps = 11/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E FYPDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFYPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK ++ +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMRKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM 234
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLM 435
Query: 235 -EGGSLP 240
+GG P
Sbjct: 436 GKGGKFP 442
>gi|19704725|ref|NP_604287.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328503|ref|ZP_06871023.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19715045|gb|AAL95586.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296154409|gb|EFG95207.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 444
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 174/242 (71%), Gaps = 8/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER+KP++L S R+ R+A+ SG V++L+ Q Q MK++M + G +P
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFDQ----MKSMMKMFSSGKMP 431
Query: 241 AL 242
+
Sbjct: 432 NI 433
>gi|336419495|ref|ZP_08599757.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
gi|336163626|gb|EGN66544.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
Length = 443
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 176/247 (71%), Gaps = 11/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM 234
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLM 435
Query: 235 -EGGSLP 240
+GG P
Sbjct: 436 GKGGKFP 442
>gi|260495487|ref|ZP_05815613.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
gi|260197024|gb|EEW94545.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
Length = 443
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 176/247 (71%), Gaps = 11/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM 234
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLM 435
Query: 235 -EGGSLP 240
+GG P
Sbjct: 436 GKGGKFP 442
>gi|289764649|ref|ZP_06524027.1| signal recognition particle [Fusobacterium sp. D11]
gi|289716204|gb|EFD80216.1| signal recognition particle [Fusobacterium sp. D11]
Length = 444
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGV 233
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGA 435
Query: 234 M-EGGSLP 240
M +GG P
Sbjct: 436 MGKGGKFP 443
>gi|422340385|ref|ZP_16421333.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355369069|gb|EHG16473.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 444
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGV 233
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGA 435
Query: 234 M-EGGSLP 240
M +GG P
Sbjct: 436 MGKGGKFP 443
>gi|146297160|ref|YP_001180931.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410736|gb|ABP67740.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 443
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMNELVAIKSAIKPTEILLVLDAMTGQDAVNVAEAFNNQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE FYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGMGEKMEDLEVFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|254304380|ref|ZP_04971738.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324572|gb|EDK89822.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 444
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGA 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|422933064|ref|ZP_16965988.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891771|gb|EGQ80711.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 443
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 176/247 (71%), Gaps = 11/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM 234
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLM 435
Query: 235 -EGGSLP 240
+GG P
Sbjct: 436 GKGGKFP 442
>gi|373497899|ref|ZP_09588415.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404367833|ref|ZP_10973195.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
gi|371962421|gb|EHO80022.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404288644|gb|EFS25760.2| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
Length = 446
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/240 (49%), Positives = 173/240 (72%), Gaps = 8/240 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K+ + P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMDELRNIKKAVRPQEILLVVDAMIGQDAVNLAESFNNVLSIDGIVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ ++
Sbjct: 260 SIKSVVGKPIKFVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ MIPGMG++ + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQV--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER+KP++L + R+KR+A SG +++L+ Q Q MK +M + GG +P
Sbjct: 378 MTKEERKKPDILKAN--RKKRIALGSGTEVADINRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|423138302|ref|ZP_17125945.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371958340|gb|EHO76059.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 443
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 176/247 (71%), Gaps = 11/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM 234
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG+M
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLM 435
Query: 235 -EGGSLP 240
+GG P
Sbjct: 436 GKGGKFP 442
>gi|164688563|ref|ZP_02212591.1| hypothetical protein CLOBAR_02208 [Clostridium bartlettii DSM
16795]
gi|164602976|gb|EDQ96441.1| signal recognition particle protein [Clostridium bartlettii DSM
16795]
Length = 450
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 172/248 (69%), Gaps = 8/248 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +F+ +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVRPHEILLVVDSMTGQDAVNVAESFDNALGIDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++DLEPF+PDRMA RILGMGDVLS +EKAQE M E A+ +
Sbjct: 261 SIRAVTQKPIKFIGMGEKLDDLEPFHPDRMASRILGMGDVLSLIEKAQETMDMEKAKALG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
K+ FDF DFL Q + +MGSM +++GMIPGMG I V K + ++A+I
Sbjct: 321 AKLKKQEFDFEDFLDQMEQIQKMGSMDKILGMIPGMGDIKNQLGDVDMNGKEMNRIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK----NLMGVM 234
++MT EER P++L S R++R+A+ SG + Q+V++L+ QL +M+ MK N G+
Sbjct: 381 QSMTVEERRNPQILNAS--RKRRIAKGSGTSVQEVNKLIKQLNEMKKMMKMFTSNSKGMK 438
Query: 235 EGGSLPAL 242
+ G P L
Sbjct: 439 KRGGFPGL 446
>gi|312622773|ref|YP_004024386.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203240|gb|ADQ46567.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 443
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAAL
Sbjct: 200 LMDELVAIKNAIKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK ++GKPIK G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S F DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 380 MTKEERQDPSIINSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|294786046|ref|ZP_06751331.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
gi|294486268|gb|EFG33633.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
Length = 444
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGA 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|237741085|ref|ZP_04571566.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256846224|ref|ZP_05551681.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
gi|229430617|gb|EEO40829.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256717993|gb|EEU31549.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
Length = 444
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGA 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|421146007|ref|ZP_15605809.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487592|gb|EJG08545.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 444
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 175/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGA 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNARLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK +G GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIKAVTQKPIKYIGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++ F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++
Sbjct: 321 QKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDFSEKDLKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|237745294|ref|ZP_04575775.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
gi|229432523|gb|EEO42735.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
Length = 444
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 174/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K+ + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+ GGAAL
Sbjct: 200 LMEELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTHGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGV 233
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK MG
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGA 435
Query: 234 M-EGGSLP 240
M +GG P
Sbjct: 436 MGKGGKFP 443
>gi|37522208|ref|NP_925585.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
gi|35213208|dbj|BAC90580.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
Length = 497
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 163/217 (75%), Gaps = 2/217 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ +K ++P E+LLVVDAMTGQEAA L F+ +GITGAILTKLDGD+RGGAAL
Sbjct: 202 MMAELERIKAAIDPEEILLVVDAMTGQEAANLTRAFHDRLGITGAILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+++SG+PIK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +M+
Sbjct: 262 SVRKISGQPIKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFADAAKME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++++ FDF F+KQ R + MG + V+ MIPGM KI+ Q+R+ E LK EAMI +
Sbjct: 322 QQLLTGQFDFESFIKQMRMIKNMGPLGGVLKMIPGMNKISDDQIRQGEVQLKKAEAMIGS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT +ER P+L+ S R++R+++ SG + + V +L+
Sbjct: 382 MTTQERRNPDLINLS--RKRRISKGSGVSLEDVGKLL 416
>gi|167037689|ref|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116104|ref|YP_004186263.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389503|ref|ZP_08211070.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392940886|ref|ZP_10306530.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
gi|166856523|gb|ABY94931.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929195|gb|ADV79880.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994508|gb|EGD52933.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392292636|gb|EIW01080.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
Length = 446
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIKAVTQKPIKYVGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++ F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++
Sbjct: 321 QKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|345017770|ref|YP_004820123.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033113|gb|AEM78839.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 446
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K+ + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIKAVTQKPIKYVGAGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++ F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++
Sbjct: 321 QKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|158320496|ref|YP_001513003.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
gi|158140695|gb|ABW19007.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
Length = 448
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K + P E+LLVVD+MTGQ+A + FN ++GI G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKDIKNDVKPHEILLVVDSMTGQDAVNVAEHFNEKLGIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+ KPIK G GE+++DLEPFYPDRMA RILGMGD+LS +EKAQ + A+E++
Sbjct: 261 SVRAVTNKPIKFTGLGEKLDDLEPFYPDRMASRILGMGDMLSLIEKAQANFDAKKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI + F F+DFL Q V +MGS+S+++ MIPGMG + EK L ++A+I++
Sbjct: 321 NKIKTQQFTFDDFLDQLEQVQKMGSLSQILEMIPGMGGKQLKGMDVDEKELVYVKAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER P ++ S RRKR+A SG + QQV++L+ Q Q R MK
Sbjct: 381 MTKNERHDPSIINGS--RRKRIASGSGTSVQQVNKLLKQFEQTRKMMKQF 428
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++KR + P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++ F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++
Sbjct: 321 QKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|340758049|ref|ZP_08694641.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
gi|251836338|gb|EES64875.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
Length = 446
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 171/240 (71%), Gaps = 8/240 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K+ + P E+LLVVDAM GQ+A L FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELRSIKKAVRPQEILLVVDAMIGQDAVNLAEAFNNVLSIDGIVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + ++DA+ ++
Sbjct: 260 SIKSVVGKPIKFVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEDDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQI--GDIAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER+KP++L S R+KR+A SG V++L+ Q Q MK +M + GG +P
Sbjct: 378 MTKEERKKPDILKAS--RKKRIALGSGTEVADVNRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++KR + P E+LLVVDAMTGQ+A + ++FN + ITG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+++ F DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++
Sbjct: 321 QKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER+ P ++ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|323484786|ref|ZP_08090143.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323691859|ref|ZP_08106113.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|355627802|ref|ZP_09049433.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
gi|323401892|gb|EGA94233.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323504066|gb|EGB19874.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|354820127|gb|EHF04553.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
Length = 454
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 164/230 (71%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ + LLVVDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAAL
Sbjct: 202 MMNELVEIKENVDVYQTLLVVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVLS ++KA VM +E A+E+
Sbjct: 262 SIKAVTGKPIIYVGMGEKLSDLEQFYPDRMASRILGMGDVLSIIDKAAAVMDEEKAKELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI A FD+NDFL Q R + +MG MS ++ M+PGM ++ + EK++ +EA+I +
Sbjct: 322 KKIKKAEFDYNDFLDQMRQIKQMGGMSSILTMMPGMNQLKGVDLDGNEKAMDRVEAIILS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+L+ +P R+KR+A +G +V+++V Q +M+ MK L
Sbjct: 382 MTDEERRNPDLI--NPSRKKRIANGAGVDIAEVNRMVKQFGEMKKMMKQL 429
>gi|325105803|ref|YP_004275457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
gi|324974651|gb|ADY53635.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
Length = 448
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE+ +VK+ NP E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 LMDEIAEVKKATNPQEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK VG GE+M+ L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+Q
Sbjct: 260 SIKSVVNKPIKFVGTGEKMDALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKKAAELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + + +MG++ ++GMIPG+GK+ + + + K +EA+I +
Sbjct: 320 KKIRKNKFDFNDFLGQIQQIKKMGNIKDLMGMIPGVGKMMK-NIEVDDNAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ERE P+ + +P RR+R+A+ SG +V++L+ Q MR MK
Sbjct: 379 MTPYERENPDTI--NPSRRQRIAKGSGTDIAEVNKLIKQFEDMRKVMKQF 426
>gi|392964046|ref|ZP_10329467.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
gi|387846941|emb|CCH51511.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
Length = 439
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 164/239 (68%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+++VKR ++PTE L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMQEIENVKRAISPTETLFVVDSMTGQDAVNTAKTFNDRLNFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIKTVVNKPIKFISTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ FDFNDFL Q + + +MG++ ++GMIPGMGK+ + S K +EA+I +
Sbjct: 319 AKMRKNQFDFNDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK-DLDIDNDSFKPIEAIISS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MTP+ERE+PEL+ S R+KR+A SG QQV+ L+ Q +MR MK + + G L
Sbjct: 378 MTPKERERPELIDGS--RKKRIAAGSGTDIQQVNNLLKQFDEMRKMMKKMNTMQASGKL 434
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 172/238 (72%), Gaps = 4/238 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ + + PTE+LLV DAMTGQEA + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 200 MMQELERMAEAVRPTEILLVADAMTGQEAVNVAKEFHRRLSLTGLILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V G PIK +G GER++ LEPFYPDR+A RILGMGDVLS +EKAQ+ + QE+ +++Q
Sbjct: 260 SIRAVVGVPIKFIGTGERVDALEPFYPDRLATRILGMGDVLSLIEKAQQQISQEEGKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIE 179
+K+++ FD DFL+Q + V +MG +++++ MIPGMG++ QV+ ++ K +EA+I
Sbjct: 320 EKLLAGTFDLEDFLRQLQQVKKMGPLTQLLEMIPGMGQLLRQQQVQISDDEYKRIEAIIL 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEER P+++ S RR+R+AQ SG T +VSQL+ Q QM+ RM +G + G
Sbjct: 380 SMTPEERRNPDIINYS--RRRRIAQGSGTTIAEVSQLLTQFKQMQ-RMMAELGQLAAG 434
>gi|326791391|ref|YP_004309212.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
gi|326542155|gb|ADZ84014.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
Length = 446
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 170/236 (72%), Gaps = 4/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++ P E+LLVVDAMTGQ+A + +F+ +G+ G ++TKLDGDSRGGAAL
Sbjct: 201 LMDELKNIKALVKPQEILLVVDAMTGQDAVNVAESFDQTLGLDGVVMTKLDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ KPIK VG GE++ DLEPF+P+R+A RILGMGDVL+ +EKAQ+ + ++ A+E++
Sbjct: 261 SVKAVTNKPIKFVGMGEKLNDLEPFHPERIASRILGMGDVLTLIEKAQQNIDEKKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMI 178
K A F+F DFL+Q + + MG +S+++GMIPGM K+ Q + EK + +EA+I
Sbjct: 321 AKFRKAEFNFEDFLEQMQQIKNMGPISQLLGMIPGMNAAKLNEIQGQVDEKQMAHIEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT ER P LL S R+KR+AQ SG+ Q+V++L+ Q QM+ MK G M
Sbjct: 381 LSMTKAERLNPSLLNMS--RKKRIAQGSGRDLQEVNRLIKQFEQMQGMMKQFSGAM 434
>gi|229918605|ref|YP_002887251.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
gi|229470034|gb|ACQ71806.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
Length = 446
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL++VK + P E+ LVVD+MTGQ+A + +FN ++GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMGELENVKTIAKPNEIFLVVDSMTGQDAVNVADSFNEKLGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK VG GE+++ LEPF+P+RMA RILGMGDVLS +EKA+ M Q+ A+E++
Sbjct: 262 SIKAVTGAPIKFVGLGEKLDALEPFHPERMASRILGMGDVLSLIEKAETQMDQDAAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KI A+F F+DF++Q V MG + ++ M+PG GK+ + V+ EK L +EA+I
Sbjct: 322 SKIRDASFTFDDFIEQLAQVKNMGPIDELLSMLPGAGKMKGLKNVQIDEKQLDHVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT ER PE+L S RRKR+A+ SG++ Q+V++L+ Q M+ MK + G M+G
Sbjct: 382 SMTKHERANPEVLNAS--RRKRIAKGSGRSIQEVNRLIKQFDDMKKMMKQMSGQMKG 436
>gi|326803882|ref|YP_004321700.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650579|gb|AEA00762.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 491
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK+++ ++P E+LL VDAM+GQEAA + TF+ E+ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKNIQAAVHPDEILLTVDAMSGQEAANVAKTFDEELELTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ ++GKPIK G GE++ED+E FYPDRM+ RILGMGD+++ +EKAQ+ +++AEEM
Sbjct: 262 SIASITGKPIKFTGVGEKLEDIETFYPDRMSNRILGMGDMMTLIEKAQKEFDEKEAEEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
K+ + +DFNDF+KQ + +MGS +I MIPG+ KI P + K + +A+I+
Sbjct: 322 AKMQANTYDFNDFVKQMDQMNKMGSFESIIKMIPGLNKILPVDKLNIDPKDMVRTKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MT ER P+ + +S RR+R+A+ S T QV+QL+ Q Q R +M M G +
Sbjct: 382 SMTDYERTHPDEINQS--RRRRIAKGSATTVNQVNQLIKQFNQSRT----MMSAMTNGDM 435
Query: 240 PALSNL 245
+LS+L
Sbjct: 436 SSLSSL 441
>gi|392529142|ref|ZP_10276279.1| signal recognition particle protein [Carnobacterium maltaromaticum
ATCC 35586]
Length = 474
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 172/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMTELTDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRSVTGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
+K+ +FDFNDF++Q + MG + ++ MIPGM + + + K M+A++
Sbjct: 322 QKMQDNSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+
Sbjct: 382 SMTPQERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNF 435
Query: 240 PALSNL 245
+ +
Sbjct: 436 NGMDGM 441
>gi|34763935|ref|ZP_00144833.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886292|gb|EAA23570.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 444
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 174/248 (70%), Gaps = 12/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR + P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE++ D+E F+PDR+ ILGMGDV+S VEKAQEV+ + +A+ ++
Sbjct: 260 SIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSGILGMGDVVSLVEKAQEVIDENEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI S FD NDFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++
Sbjct: 320 EKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MT EER+KP++L S R+ R+A+ SG V++L+ Q QM+ MK N+
Sbjct: 378 MTKEERKKPDILKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGA 435
Query: 233 VMEGGSLP 240
+ +GG P
Sbjct: 436 MGKGGKFP 443
>gi|414083599|ref|YP_006992307.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
gi|412997183|emb|CCO10992.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
Length = 494
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 172/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMTELTDIKAVTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRSVTGKPIKFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
+K+ +FDFNDF++Q + MG + ++ MIPGM + + + K M+A++
Sbjct: 322 QKMQDNSFDFNDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+
Sbjct: 382 SMTPQERENPDLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNF 435
Query: 240 PALSNL 245
+ +
Sbjct: 436 NGMDGM 441
>gi|403383367|ref|ZP_10925424.1| signal recognition particle-like (SRP) component [Kurthia sp. JC30]
Length = 455
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 176/253 (69%), Gaps = 10/253 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNDAVGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 262 SIRSVTEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVLSLIEKAQETVDAEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K + +F F+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I+
Sbjct: 322 EKFKTQSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKVKGLDKMNFDDKQINHIEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--GG 237
+MT ER PE++ S RRKR+A SG++ Q+V++L+ Q +M+ MK + G+M GG
Sbjct: 382 SMTIAERTNPEIITSS--RRKRIALGSGRSVQEVNRLIKQFDEMKKMMKQMSGMMNPAGG 439
Query: 238 -----SLPALSNL 245
LP + +L
Sbjct: 440 KKKKFKLPGMDSL 452
>gi|187778958|ref|ZP_02995431.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
15579]
gi|187772583|gb|EDU36385.1| signal recognition particle protein [Clostridium sporogenes ATCC
15579]
Length = 449
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NPTE+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKEEVNPTEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|121533796|ref|ZP_01665623.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
gi|121307787|gb|EAX48702.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
Length = 444
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + FN ++GI G ILTKLDGD+RGGAAL
Sbjct: 199 LMDELKAIKNTVKPHEILLVVDAMTGQDAVTVAEAFNEQLGIDGVILTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+G+PIK VG GE+++ LEPFYPDRMA RILGMGDVLS +EKA+E + E A EM+
Sbjct: 259 SVRAVTGRPIKYVGMGEKLDALEPFYPDRMASRILGMGDVLSLIEKAEEAINLEQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KKI F +DFL Q + + ++G + +++ M+PGMG + Q ++ EK LK +EA+I
Sbjct: 319 KKIRKEEFTLDDFLDQLQQLKKLGPLDQLLSMLPGMGNLKKLQGLKFDEKELKHVEAIIR 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER P ++ S RRKR+A SG Q V++L+ Q + + MK L
Sbjct: 379 SMTKKERRDPSIINGS--RRKRIAMGSGTKVQDVNRLLKQFAEAKKMMKRL 427
>gi|317133004|ref|YP_004092318.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
gi|315470983|gb|ADU27587.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
Length = 443
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 168/233 (72%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + ++FN +GI G ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKRIKAAVEPDEILLVVDAMTGQDAVNVASSFNEVLGIDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPIK G GE+++DLEPF+P+RMA RILGMGD+L+ +EKA++ + Q+ A EM
Sbjct: 260 SVRAVTGKPIKFAGTGEKLDDLEPFHPERMASRILGMGDMLTLIEKAEQEVDQKKAAEMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KK+ DFNDFL+ R + +MGS+S V+ M+PG+ GK++ Q+ + E +K EA+I
Sbjct: 320 KKLKHNAIDFNDFLESIRQMKKMGSLSSVMNMLPGVRGKVSEEQMDKGEIEMKRTEAIIT 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT ERE+PE + +P R++R+A SG + V++L+ Q R MK + G
Sbjct: 380 SMTAYERERPESI--NPSRKRRIASGSGTKVEDVNRLLRNFEQTRKMMKQMGG 430
>gi|387818670|ref|YP_005679017.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
Length = 449
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|421837788|ref|ZP_16271860.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|409739977|gb|EKN40451.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
Length = 449
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|219117644|ref|XP_002179613.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408666|gb|EEC48599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 448
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 167/235 (71%), Gaps = 8/235 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ +KR +P E LL+VDAMTGQEAA+L F+ IG+TGAILTK+DGDSRGGAA+
Sbjct: 192 LMDELQRMKRAASPQETLLIVDAMTGQEAASLTAAFDSAIGLTGAILTKMDGDSRGGAAV 251
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ VSGKPIK VG GE+ DLEPFYPDRMA RILGMGDV+S VEKA + DA +MQ
Sbjct: 252 SVRGVSGKPIKFVGTGEKTADLEPFYPDRMASRILGMGDVVSLVEKAASEVSDADALKMQ 311
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K++ A+FDF+DF+KQ+ V +MGS++ + ++PGM ++ Q+RE E LK ++MI
Sbjct: 312 QKMLDASFDFDDFVKQSELVTKMGSVAGIAKLMPGMANQLNMNQIREVEARLKKSKSMIS 371
Query: 180 AMTPEEREKPELLAESPVRRK---RVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MT +ER PELL + R R+ + SG + Q +++ FQ RMK +M
Sbjct: 372 SMTKKERANPELLIKDSSARSRLIRITKGSGCGLDEGQQFMSE-FQ---RMKTMM 422
>gi|366089288|ref|ZP_09455761.1| signal recognition particle protein [Lactobacillus acidipiscis KCTC
13900]
Length = 477
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 172/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D++++ +P EVLL VD+MTGQ A + FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELADIQKLASPDEVLLTVDSMTGQNATEVAEGFNEQLNITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+++ +EKAQ ++ A+++Q
Sbjct: 262 SIRAVTGKPIKFIGQGEKMADLDVFYPDRMASRILGMGDMMTLIEKAQRDYDEKKAQDLQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
+K+ + FDFNDFL+Q V MGSM ++ MIPGM + + + K + +A++
Sbjct: 322 EKMRANTFDFNDFLEQLDQVQNMGSMEDIMKMIPGMANNSALKNASIDPKDMDHTKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P++L P RR+R+A SG++ Q+V++L+ Q QMR ++M + G+
Sbjct: 382 SMTPQEREDPDIL--KPSRRRRIAAGSGRSVQEVNRLIKQFKQMR----DMMAKVSNGNF 435
Query: 240 PALSNL 245
+ NL
Sbjct: 436 SGMENL 441
>gi|169824222|ref|YP_001691833.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302380887|ref|ZP_07269349.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|303234951|ref|ZP_07321576.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|417925858|ref|ZP_12569273.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
gi|167831027|dbj|BAG07943.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302311265|gb|EFK93284.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|302494069|gb|EFL53850.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|341590783|gb|EGS34014.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
Length = 446
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 175/235 (74%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ +NP+++LLVVDAMTGQ+A + FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKQEVNPSDILLVVDAMTGQDAVNVAAKFNEDLDITGIILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+ KPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E++
Sbjct: 260 SIRQVADKPIKFIGVGEKLGDLEPFHPDRMASRILGMGDVLSLIEKAQNQFDEKKAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + +FDFNDFL Q + + +MG M ++ MIPG+ QV K +EA+I++
Sbjct: 320 EKIKAQSFDFNDFLDQMQQIKKMGPMQDILAMIPGVDSKMLKQVNFDNKEFDKIEAIIKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
MT +ERE P++++ S RRKR+A+ G+ + V++L+ Q +M+V MKN MG ++
Sbjct: 380 MTKQERENPDIISIS--RRKRIAKGCGQDQVAVNKLLKQFKEMKVMMKN-MGALQ 431
>gi|297587488|ref|ZP_06946132.1| signal recognition particle protein [Finegoldia magna ATCC 53516]
gi|297574177|gb|EFH92897.1| signal recognition particle protein [Finegoldia magna ATCC 53516]
Length = 449
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 175/235 (74%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ +NP+++LLVVDAMTGQ+A + FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 203 LMDELKNIKQEVNPSDILLVVDAMTGQDAVNVAAKFNEDLDITGIILTKLDGDARGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+ KPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E++
Sbjct: 263 SIRQVADKPIKFIGVGEKLGDLEPFHPDRMASRILGMGDVLSLIEKAQNQFDEKKAKELE 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + +FDFNDFL Q + + +MG M ++ MIPG+ QV K +EA+I++
Sbjct: 323 EKIKAQSFDFNDFLDQMQQIKKMGPMQDILAMIPGVDSKMLKQVNFDNKEFDKIEAIIKS 382
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
MT +ERE P++++ S RRKR+A+ G+ + V++L+ Q +M+V MKN MG ++
Sbjct: 383 MTKQERENPDIISIS--RRKRIAKGCGQDQVAVNKLLKQFKEMKVMMKN-MGALQ 434
>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|384462755|ref|YP_005675350.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|429243872|ref|ZP_19207356.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|428759078|gb|EKX81467.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
Length = 449
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLL 419
>gi|414154258|ref|ZP_11410577.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454049|emb|CCO08481.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 446
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 170/240 (70%), Gaps = 6/240 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL ++K + P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAAL
Sbjct: 199 LMGELAEIKTAVKPHEILLVVDAMTGQEAVNVADTFNRKLGLDGIIMTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++V+G PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++
Sbjct: 259 SVRKVTGTPIKFAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
KKI A+F+ DFL+Q + V ++G + +++GMIPGM K+T Q+++ + K L +EA+
Sbjct: 319 KKIRQADFNLEDFLEQLQQVKKLGPLEQILGMIPGMNKLTK-QLKDQQLDGKELAQVEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I +MTP ER+ PE + S R+KR+A+ SG Q V+QL+ Q Q R MK L + +GG
Sbjct: 378 IYSMTPWERQHPEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQLSNMTKGG 435
>gi|335040129|ref|ZP_08533265.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334179954|gb|EGL82583.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 449
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 167/231 (72%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMNELNQIKEEVRPDEILLVVDAMTGQDAVNVAQSFNEQLNITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G+PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + QE A+E++
Sbjct: 261 SVKAVTGQPIKFVGMGEKLDALEPFHPDRMASRILGMGDVLTLIEKAQREVDQEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+KI F F+DFL+Q V MG + ++ M+PG GK+ + ++ EK LK +EA+I
Sbjct: 321 RKIRKMEFTFDDFLEQLEQVRNMGPLDELLSMLPGAGKMKGLKDLKVDEKKLKQVEAIIR 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE++ PE++ S RRKR+AQ SG + Q V++L+ Q M+ MK +
Sbjct: 381 SMTKEEKQNPEIINAS--RRKRIAQGSGTSVQDVNRLLKQFQDMKKMMKQM 429
>gi|424827553|ref|ZP_18252340.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
gi|365979993|gb|EHN16034.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
Length = 449
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NPTE+LLVVD+MTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKEEVNPTEILLVVDSMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 165/230 (71%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + PTE+LLVVD+MTGQ+A + TFN ++GI G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKESVRPTEILLVVDSMTGQDAVNVSETFNEKLGIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A E++
Sbjct: 261 SVKTVTGKPIKFIGMGEKLNDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+ + F DFL+Q + + +MG +++++GMIPG+ + ++EK L EA+I
Sbjct: 321 RKMRTQQFTLEDFLEQMQQIKKMGPLNKILGMIPGINAEALNAINTADSEKELARFEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
++MT +ER P ++ S RRKR+A SG Q V++++ +M+ MK
Sbjct: 381 KSMTKQERNDPSIINGS--RRKRIAAGSGTKVQDVNKVLKSFEEMKKMMK 428
>gi|373464402|ref|ZP_09555941.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
gi|371762604|gb|EHO51133.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
Length = 461
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 171/250 (68%), Gaps = 9/250 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K ++P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAAL
Sbjct: 185 LMGELKNIKDAVHPDEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAAL 244
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ Q+ AEE+Q
Sbjct: 245 SIRAVTDKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELQ 304
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI FDFNDFL Q + +MG M ++ MIPGM PA V K + ++A+I
Sbjct: 305 EKIQENTFDFNDFLDQLSQIQKMGPMDEIMKMIPGMAN-NPALQNVNMDPKDMDHLKAII 363
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT +ER P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G+
Sbjct: 364 YSMTEQERTDPDVL--NPSRRRRIAKGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGN 417
Query: 239 LPALSNLEDA 248
+ + N+ +A
Sbjct: 418 MSGMENMMNA 427
>gi|328957317|ref|YP_004374703.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
gi|328673641|gb|AEB29687.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
Length = 475
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/246 (47%), Positives = 171/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K PTE+ LVVDAMTGQEAA + ++FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELSDIKETSQPTEIFLVVDAMTGQEAANVASSFNEQLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK G GE+++ LEPFYP+RMA RILGMGD+L+ +EKAQE ++ +EEM
Sbjct: 262 SIRAVTGKPIKFTGSGEKLDALEPFYPERMANRILGMGDMLTLIEKAQEDFDEKKSEEMM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
K+ +FDFNDF++Q V+ MG M ++ MIPGM + + + K M+A++
Sbjct: 322 TKLRENSFDFNDFIEQMDQVSNMGPMEDILKMIPGMSNVPGLDKLQIDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P+LL++S RR+R+A+ S + +V++L+ Q + K +M M G++
Sbjct: 382 SMTPQERENPDLLSQS--RRRRIARGSARPIAEVNRLIKQFNE----SKKMMSQMSKGNM 435
Query: 240 PALSNL 245
+ NL
Sbjct: 436 NGMENL 441
>gi|406878822|gb|EKD27624.1| hypothetical protein ACD_79C00650G0001, partial [uncultured
bacterium]
Length = 333
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M +L +VK+++NP EVLL DAMTGQ+A V TFN + ITG +LTK+DGD+RGGA +
Sbjct: 94 LMTQLINVKKLVNPDEVLLTADAMTGQDAVKTVKTFNDTLNITGVVLTKMDGDARGGAVM 153
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ ++GKP+K VG GE++E+ + FYPDRMA RILGMGD++S VEKAQ V+ ++DA ++
Sbjct: 154 SMASITGKPVKFVGTGEKIENFDYFYPDRMASRILGMGDIISLVEKAQAVVDEKDAARLE 213
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FD DFL + +MGS+ ++ MIPGM KI P V EK L +EA+I +
Sbjct: 214 KKIRKNEFDLQDFLSSIHQIKKMGSLQSIMKMIPGMPKIDPNDVD--EKKLVYIEAIINS 271
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MTP+ER P +L + R+KR+A+ G++ +++++L+ Q M+ MK + +M G
Sbjct: 272 MTPKERSNPAILNGN--RKKRIAKGCGRSVEEINRLLKQFRDMKTMMKRMQSLMGKG 326
>gi|373111972|ref|ZP_09526207.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840623|ref|ZP_14364011.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|371656540|gb|EHO21865.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907566|gb|EIJ72273.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 449
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 177/245 (72%), Gaps = 8/245 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELKNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ ++
Sbjct: 260 SIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P
Sbjct: 378 MTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMP 431
Query: 241 ALSNL 245
NL
Sbjct: 432 NFPNL 436
>gi|340754763|ref|ZP_08691499.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|421499991|ref|ZP_15947014.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685772|gb|EFS22607.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|402269092|gb|EJU18438.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 449
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 177/245 (72%), Gaps = 8/245 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++KR+ P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELKNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ ++
Sbjct: 260 SIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + FD NDFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++
Sbjct: 320 EKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +ER+KPE+L S R++R+A+ SG +++L+ Q QM+ MK + GG +P
Sbjct: 378 MTKQERKKPEILKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMP 431
Query: 241 ALSNL 245
NL
Sbjct: 432 NFPNL 436
>gi|334340367|ref|YP_004545347.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
gi|334091721|gb|AEG60061.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
Length = 451
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 169/236 (71%), Gaps = 6/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVDAMTGQEA + +FN ++G+ G I+TKLDGD+RGGAAL
Sbjct: 199 LMDELANIKGTVKPHEILLVVDAMTGQEAVNVADSFNQKLGLDGIIMTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++V+G PIK G GE+++ LEPF+PDRMA RILGMGD+L+ +EKAQ E A ++
Sbjct: 259 SVRKVTGCPIKFAGMGEKLDALEPFHPDRMADRILGMGDMLTLIEKAQANFDAEQAAKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
+KI A+F+ DFL Q + V ++G + +V+GMIPGMGK+T Q+++ EK L +EA+
Sbjct: 319 QKIRKADFNLEDFLDQMQQVKKLGPLEQVLGMIPGMGKLT-KQLKDQQIDEKELGQVEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MTP ER+ PE + S R+KR+A+ SG Q ++QL+ Q Q + MK L G+
Sbjct: 378 IHSMTPWERQHPERIDGS--RKKRIARGSGNRVQDINQLLKQFEQTKKMMKQLSGL 431
>gi|134299902|ref|YP_001113398.1| signal recognition particle protein [Desulfotomaculum reducens
MI-1]
gi|134052602|gb|ABO50573.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfotomaculum reducens MI-1]
Length = 446
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 166/233 (71%), Gaps = 6/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVDAMTGQEA + TFN ++G+ G ++TKLDGD+RGGAAL
Sbjct: 199 LMDELANIKSTVRPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIVMTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ E A ++
Sbjct: 259 SVRKVTGTPIKFAGMGEKLDALEPFYPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
KKI A+F+ DFL+Q + V ++G + +V+GMIPGMGK+T Q+++ + K L +EA+
Sbjct: 319 KKIRQADFNLEDFLEQMQQVKKLGPLEQVLGMIPGMGKLTK-QLKDQQLDGKELAQVEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT ER PE + S R+KR+A+ SG Q V+QL+ Q Q R MK +
Sbjct: 378 IYSMTVWERHHPEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQI 428
>gi|167769126|ref|ZP_02441179.1| hypothetical protein ANACOL_00449 [Anaerotruncus colihominis DSM
17241]
gi|167668766|gb|EDS12896.1| signal recognition particle protein [Anaerotruncus colihominis DSM
17241]
Length = 459
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 163/225 (72%), Gaps = 3/225 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK ++ ++P E+LLVVDAM GQ+A + + F+ +GI+G ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKRIRDEVSPQEILLVVDAMVGQDAVNVASAFDEALGISGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKP+K VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + A EM
Sbjct: 260 SVRAVTGKPVKFVGTGEKLGDLEPFYPDRMASRILGMGDVLTLIEKAQSDFDAKQAAEMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ F+FND L Q + + +MG +S VI M+PG+ GK+ Q + E+ L+ EA+I+
Sbjct: 320 QKMRQNTFNFNDMLAQMQQLKKMGPLSSVINMLPGVAGKLDDEQAEQGERELRRTEAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MTP EREKP L+ +P R++R+A SG + V++L+ Q QM+
Sbjct: 380 SMTPAEREKPSLI--NPARKRRIAAGSGTRVEDVNRLLRQNEQMQ 422
>gi|372324774|ref|ZP_09519363.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
gi|366983582|gb|EHN58981.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
Length = 501
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 175/294 (59%), Gaps = 27/294 (9%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIEKIAKPDEILLTVDAMTGQNATETAQGFNDALGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGD+LS +EK Q+ + + A
Sbjct: 262 SIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDILSLIEKTQKDVDAKQAAAQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDFL Q + V MG M ++ MIPGM AQV+ K MEA++
Sbjct: 322 QKLQENSFDFNDFLDQLKQVQNMGPMEDMLKMIPGMANNAALAQVQVGPKDFAHMEAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ER PELL SP RR+R+A SG+ V++++ Q QMR M G L
Sbjct: 382 SMTPAERLDPELL--SPARRRRIAAGSGRPVIDVNKMIKQFKQMRQMMYKFTN--GKGGL 437
Query: 240 PALSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPAS------TRPSPRGFGG 287
PA +ED L + G DPA + P+ GFGG
Sbjct: 438 PA--GMEDMLSGVDPSALGA--------------DPAQMGGMMPSFPNQGGFGG 475
>gi|392957499|ref|ZP_10323022.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
gi|391876462|gb|EIT85059.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
Length = 447
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 171/231 (74%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK + NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMEELQQVKEIANPHEILLVVDSMTGQDAVNVAESFNEKLGVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+M+ LEPF+PDRM+ RILGMGDVL+ +EKAQ + +E A+E+Q
Sbjct: 262 SIKAVTNLPIKFAGMGEKMDALEPFHPDRMSSRILGMGDVLTLIEKAQTTVDEEKAKELQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ +F F+DFL+Q V +G + +++GM+PG GK+ + V EK + +EA+I+
Sbjct: 322 KKMRDMSFTFDDFLEQMGQVRNLGPLDQLLGMMPGAGKMKGLKNVSIDEKQISHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT ERE+PE+++ S R++R+A SG+T Q+V++L+ Q M+ MK +
Sbjct: 382 SMTKLEREQPEIISAS--RKRRIANGSGRTVQEVNRLIKQFEDMKKMMKQM 430
>gi|51892603|ref|YP_075294.1| signal recognition particle protein [Symbiobacterium thermophilum
IAM 14863]
gi|51856292|dbj|BAD40450.1| signal recognition particle [Symbiobacterium thermophilum IAM
14863]
Length = 454
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 171/236 (72%), Gaps = 9/236 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K + P + LLV+DAM GQ+A F+ ++GI G ILTKLDGD+RGGAAL
Sbjct: 200 LMEELQQIKARIQPHDTLLVLDAMIGQDAVTTAEHFHTKLGIDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+EV+G+PIK VG GE+++ LEPFYPDR+A RILGMGDVL+ +EKAQE + ++ AEEM
Sbjct: 260 SVREVTGRPIKFVGVGEKLDALEPFYPDRLASRILGMGDVLTLIEKAQEQVDRKQAEEMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
+K++ A FDF DFL+Q R + RMG + ++ M+PG+G AQ+++ EK LK +EA+
Sbjct: 320 RKMLKAQFDFEDFLEQLRALQRMGPLQDILKMLPGVG----AQLKDINIDEKELKHIEAI 375
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MTP+ER P+++ + RR+R+A+ SG+ +V +L+ Q Q R MK L G+
Sbjct: 376 ILSMTPKERRNPDII--NVRRRERIARGSGRPIAEVHRLIKQFEQTRKLMKQLGGM 429
>gi|385840301|ref|YP_005863625.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|417810407|ref|ZP_12457086.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
gi|300214422|gb|ADJ78838.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|335349203|gb|EGM50703.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
Length = 479
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 163/232 (70%), Gaps = 5/232 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 322 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 381 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|323702674|ref|ZP_08114335.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333923302|ref|YP_004496882.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532337|gb|EGB22215.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333748863|gb|AEF93970.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 444
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 171/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAAL
Sbjct: 199 LMDELANIKASVKPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIIMTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++V+G PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++
Sbjct: 259 SVRKVTGCPIKFAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
+KI A F+ DFL+Q + V +MG + +V+ MIPGM K+T Q+++ EK L +EA+
Sbjct: 319 RKIRQAEFNLEDFLEQMQQVKKMGPLEQVLSMIPGMNKLT-KQLKDQQIDEKELAQVEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I +MTP ER+ PE + S R+KR+A+ SG Q V+QL+ Q Q R MK + + + G
Sbjct: 378 IYSMTPWERQHPERIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQIASMTKSG 435
Query: 238 -SLPAL 242
LP L
Sbjct: 436 RKLPKL 441
>gi|210622533|ref|ZP_03293226.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
gi|210154168|gb|EEA85174.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
Length = 453
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 170/239 (71%), Gaps = 7/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + P E+LL VDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKNIKSEVRPHEILLTVDAMTGQDAVNVAESFNDALGIDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE++EDLEPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTKKPIKFIGMGEKLEDLEPFHPDRMASRILGMGDVLSLIEKAQEAVDIEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE----KSLKIMEA 176
KK+ FDF D L Q + +MGSM +++GM+PGM + Q+ + + K +K A
Sbjct: 321 KKMRKQEFDFEDLLDQFEQLKKMGSMDKLLGMMPGMANM-KNQIGDVDLQNNKDMKRSMA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
+I++MT EER P +L S R+KR+A+ SG + Q+V++L+ QL +M+ MK G+ +
Sbjct: 380 IIQSMTVEERRNPSILNAS--RKKRIAKGSGTSVQEVNRLIKQLNEMKKMMKMFTGMTQ 436
>gi|90961606|ref|YP_535522.1| signal recognition particle protein [Lactobacillus salivarius
UCC118]
gi|90820800|gb|ABD99439.1| Signal recognition particle protein [Lactobacillus salivarius
UCC118]
Length = 482
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 163/232 (70%), Gaps = 5/232 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 205 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 264
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 265 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 324
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 325 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 383
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 384 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 433
>gi|260437024|ref|ZP_05790840.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
gi|292810333|gb|EFF69538.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
Length = 448
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 171/241 (70%), Gaps = 11/241 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+ELK++K +N + +LVVDAMTGQ+A + +TFN +IGI G +LTKLDGD+RGGAAL
Sbjct: 202 MMNELKEIKEAVNVHQTILVVDAMTGQDAVNVASTFNEQIGIDGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI +G GE++ DLE FYPDRMA RILGMGDVL+ +EK Q +E A+EM+
Sbjct: 262 SIKAVTGKPILYIGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKVQADFDEEKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-----EKSLKIME 175
+K+ + FDFND+L+ + V ++G + +++ M+PGM +Q++ A EK + +E
Sbjct: 322 RKLKKSEFDFNDYLESFKQVKKLGGIGKMLNMMPGMN----SQMKNAADNVDEKQIARVE 377
Query: 176 AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
A+I +MTP ER P+LL +P R+ R+A+ +G +V++LV Q QM+ MK L G+M
Sbjct: 378 AIIYSMTPAERANPKLL--NPSRKNRIARGAGVDIAEVNRLVKQQEQMKKMMKQLPGMMG 435
Query: 236 G 236
G
Sbjct: 436 G 436
>gi|392426862|ref|YP_006467856.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
gi|391356825|gb|AFM42524.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 165/232 (71%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ +K + P E+LLVVDAMTGQ+A + +F+ EIG+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMDELRAIKTTVKPHEILLVVDAMTGQDAVNVAESFHKEIGLDGVILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G IK G GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM+
Sbjct: 259 SIKAVTGCTIKFAGTGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQMKKMGPLSSLLEMIPGVGK-QLKDVKIDEKDTAHIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MT EER KP L+ +S R+KR+A+ SG + Q+V +L+ Q QM+ MK L G
Sbjct: 378 MTLEERRKPALIKDS--RKKRIAKGSGTSVQEVGRLLKQFEQMQKMMKQLTG 427
>gi|296133550|ref|YP_003640797.1| signal recognition particle protein [Thermincola potens JR]
gi|296032128|gb|ADG82896.1| signal recognition particle protein [Thermincola potens JR]
Length = 450
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 163/223 (73%), Gaps = 3/223 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + P E+L V+DA TGQ+A + TF+ ++GI G I+TKLDGD+RGGAAL
Sbjct: 201 LMEELKNIKESVKPHEILFVMDATTGQDAVNVAKTFDEQLGIDGVIITKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK VG GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + A E+Q
Sbjct: 261 SVKAVTGKPIKFVGMGEKLDALEPFFPDRMASRILGMGDVLSLIEKAQSTLDANKARELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+KI S +++ DFL+Q R V +MG + +++GM+PGMG + + V+ EK + +EA+I+
Sbjct: 321 QKIKSQDYNLEDFLEQMRQVRKMGPLDQILGMLPGMGNLKQLKDVQVDEKEMLHIEAIIQ 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 222
+MTPEER P ++ +S R+KR+A+ SG V++L+ Q Q
Sbjct: 381 SMTPEERRNPSIIKDS--RKKRIAKGSGTKVSDVNKLLKQFDQ 421
>gi|336436408|ref|ZP_08616120.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007273|gb|EGN37298.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
Length = 449
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 166/236 (70%), Gaps = 4/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+++K +N + +LVVDAMTGQ+A + ++FN +IGI G I+TKLDGD+RGGAAL
Sbjct: 202 MMAELQEIKEAVNVHQTILVVDAMTGQDAVNVASSFNEKIGIDGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PI VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA + +E A +M
Sbjct: 262 SIKAVTGCPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAGAELDEEKARQMT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+ A FDF D+L+ + +MG +S ++GM+PG+G K+ E EK + MEAMI
Sbjct: 322 QKLKKAQFDFEDYLESMSQMKKMGGLSSIMGMMPGIGGKKMPDLDSEENEKKMAQMEAMI 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MTPEER P+LL +P R+ R+A+ +G +V+++V Q +MR MK L G+M
Sbjct: 382 YSMTPEERRNPDLL--NPSRKHRIAKGAGVDIAEVNRMVKQFNEMRKMMKKLPGLM 435
>gi|301299298|ref|ZP_07205584.1| signal peptide binding domain protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300853142|gb|EFK80740.1| signal peptide binding domain protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 345
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 163/232 (70%), Gaps = 5/232 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 68 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 127
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 128 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 187
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 188 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 246
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 247 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 296
>gi|347758274|ref|YP_004865836.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
gi|347590792|gb|AEP09834.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
Length = 497
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 165/227 (72%), Gaps = 6/227 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E K V+ +NPTE LLVVDAMTGQ+A + F+ ++ +TG +LT++DGD+RGGAAL
Sbjct: 200 MMAEAKAVRDTINPTETLLVVDAMTGQDAVNTASAFDAQVAVTGIVLTRVDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIKL+G GE+ + LE F+PDR+AGRILGMGDV+S VEKA E + QEDA +M
Sbjct: 260 SMKAVTGKPIKLIGVGEKWDALEQFHPDRIAGRILGMGDVVSLVEKAVETIDQEDAMKMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
+K +FDFND L Q R + +MG +S ++ M+PG+G++ +Q+ A + +LK EA+
Sbjct: 320 QKFQKGDFDFNDLLSQMRQMQKMGGVSSLVKMLPGLGQMA-SQLENANIDDGALKKQEAI 378
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
I +MTP ER +PELL S R++R+A SG T Q +++L QL QM+
Sbjct: 379 ILSMTPAERSRPELLNAS--RKRRIATGSGTTVQDINKLHKQLQQMQ 423
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 170/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+V NP ++LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDALDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPI VG+GE+++DL+ F+PDRMA RILGMGD+LSF+EK Q+ + A+E+
Sbjct: 262 SIRAVTDKPIMFVGQGEKLDDLDVFHPDRMASRILGMGDMLSFIEKTQKEYDENQAKELT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI +FDF+DF+ Q + +MG + ++ MIPGM PA + K L ++A+I
Sbjct: 322 EKIKENSFDFDDFIDQLEQIQKMGPIQDLVKMIPGMAN-NPALKNLNVNPKDLDHIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER P++L +P RR+R+A+ S + QQV++L+ Q Q MK +M + G+
Sbjct: 381 YSMTSEERSNPDVL--NPSRRRRIARGSAQPIQQVNRLIKQFDQ----MKKMMNKVSNGN 434
Query: 239 LPALSNL 245
+ LSN+
Sbjct: 435 MSGLSNM 441
>gi|304316926|ref|YP_003852071.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778428|gb|ADL68987.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 446
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ KPIK + GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+Q
Sbjct: 261 SVKAVTHKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ F F+DFL+Q + + MG + ++ MIPG+ V ++K++K +EA+I++
Sbjct: 321 KKILEQQFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKAIKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|116490535|ref|YP_810079.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290889938|ref|ZP_06553024.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|419757833|ref|ZP_14284158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|419857504|ref|ZP_14380210.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
gi|419858985|ref|ZP_14381642.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184274|ref|ZP_15641698.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|421187982|ref|ZP_15645323.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|421193206|ref|ZP_15650457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|421194499|ref|ZP_15651719.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|421197348|ref|ZP_15654525.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|116091260|gb|ABJ56414.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290480380|gb|EFD89018.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|399905342|gb|EJN92785.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|399966655|gb|EJO01175.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|399967558|gb|EJO02031.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|399973188|gb|EJO07374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|399975576|gb|EJO09627.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|399977917|gb|EJO11888.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|410497346|gb|EKP88820.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410497768|gb|EKP89237.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
Length = 507
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 164/251 (65%), Gaps = 9/251 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E
Sbjct: 262 SIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++
Sbjct: 322 QKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ER PELL +P RR+R+A SG+ V++L+ Q QMR M G
Sbjct: 381 YSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGG 436
Query: 239 LPALSNLEDAL 249
LPA +ED L
Sbjct: 437 LPA--GMEDML 445
>gi|417788149|ref|ZP_12435832.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
gi|334308326|gb|EGL99312.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
Length = 479
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 163/232 (70%), Gaps = 5/232 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 322 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 381 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|421186068|ref|ZP_15643463.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
gi|399967712|gb|EJO02178.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
Length = 507
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 164/251 (65%), Gaps = 9/251 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E
Sbjct: 262 SIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++
Sbjct: 322 QKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ER PELL +P RR+R+A SG+ V++L+ Q QMR M G
Sbjct: 381 YSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGG 436
Query: 239 LPALSNLEDAL 249
LPA +ED L
Sbjct: 437 LPA--GMEDML 445
>gi|418961237|ref|ZP_13513124.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
gi|380344904|gb|EIA33250.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
Length = 479
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 322 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+
Sbjct: 381 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGN 434
Query: 239 LPALSNL 245
+ L
Sbjct: 435 FSGMEGL 441
>gi|357055423|ref|ZP_09116491.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
gi|355382542|gb|EHG29639.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
Length = 458
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMDELVEIKDNLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ A FD+NDFL Q + + +MG M ++ M+PGMG +++ A + E EKS+ +E++I
Sbjct: 322 QKLRKAEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGADMDEGEKSMHRVESIIL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EER P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 382 SMTKEERANPNLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|403667650|ref|ZP_10932950.1| signal recognition particle-like (SRP) component [Kurthia sp. JC8E]
Length = 453
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 169/234 (72%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRAIKEPDEVFLVVDAMTGQDAVNVAESFNEAVGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A+E++
Sbjct: 262 SIRSVTEKPIKFVGMGEKMDALEPFHPERMAQRILGMGDVLTLIEKAQATVDQEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K + +F F+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I+
Sbjct: 322 EKFKTQSFTFDDFLDQMSQVKKMGPLEDIIKMIPGMNKMKGLDKMNFDDKQINHIEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT ER PE++ S RRKR+++ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 382 SMTVAERTNPEIINAS--RRKRISKGSGRSVQEVNRLIKQFDEMKKMMKQMTGL 433
>gi|262037316|ref|ZP_06010787.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
gi|261748664|gb|EEY36032.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
Length = 445
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 173/248 (69%), Gaps = 11/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K NP E+LLVVD MTGQ+A + TFN + ITG +LTKLDGD+RGGAAL
Sbjct: 200 LMEELQNIKSTFNPHEILLVVDGMTGQDAVNVAKTFNDRLDITGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + + +A++M+
Sbjct: 260 SVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDENEAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMI 178
+K FDF DFLKQ + + +MGS++ ++ MIPG+ G I A AEK +K +E +I
Sbjct: 320 EKFRKNQFDFEDFLKQFKMIRKMGSLAGIMKMIPGVDTGAIDMAM---AEKEMKRVEGII 376
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT +ER P++L S R+ R+A+ SG V++L+ Q Q MK +M + G+
Sbjct: 377 FSMTVQERRDPKILNGS--RKIRIAKGSGVEVNDVNRLIKQFEQ----MKQMMKMFNSGA 430
Query: 239 LPALSNLE 246
+P L ++
Sbjct: 431 IPGLGGMK 438
>gi|433655070|ref|YP_007298778.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293259|gb|AGB19081.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 446
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ KPIK + GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+Q
Sbjct: 261 SVKAVTHKPIKFIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ F F+DFL+Q + + MG + ++ MIPG+ V ++K +K +EA+I++
Sbjct: 321 KKILEQQFSFDDFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKDIKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|421190065|ref|ZP_15647369.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
gi|421192045|ref|ZP_15649314.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399969992|gb|EJO04298.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399970865|gb|EJO05155.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
Length = 507
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 164/251 (65%), Gaps = 9/251 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++++ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIEKMAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKPIK VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E
Sbjct: 262 SIREVTGKPIKFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDFL+Q + + MG M ++ MIPGM P AQ + K MEA++
Sbjct: 322 QKLQENTFDFNDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ER PELL +P RR+R+A SG+ V++L+ Q QMR M G
Sbjct: 381 YSMTPGERVDPELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGG 436
Query: 239 LPALSNLEDAL 249
LPA +ED L
Sbjct: 437 LPA--GMEDML 445
>gi|172057910|ref|YP_001814370.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
gi|171990431|gb|ACB61353.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
Length = 450
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 170/239 (71%), Gaps = 9/239 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELVDVKEIAKPNEIFLVVDSMTGQDAVNVAQSFNEKLGVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++
Sbjct: 262 SIKAVTGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAESQMDATRAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-----ITPAQVREAEKSLKIME 175
K+ A+F F+DF++Q + V +MG + ++GMIPG GK + AQ+ EK L +E
Sbjct: 322 GKMRDASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQID--EKQLVYVE 379
Query: 176 AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
A+I++MT ER +PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 380 AIIQSMTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|227890693|ref|ZP_04008498.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
gi|227867631|gb|EEJ75052.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
Length = 482
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 205 LMQELSSIKELAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAAL 264
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 265 SIRAVTGKPIKFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELA 324
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFDFNDFL Q V MG M +I MIPGM PA ++ K ++ +A++
Sbjct: 325 EKMRENNFDFNDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIV 383
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+
Sbjct: 384 YSMTPQERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGN 437
Query: 239 LPALSNL 245
+ L
Sbjct: 438 FSGMEGL 444
>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 449
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELHNIKGEVNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+
Sbjct: 261 SIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+++++ F+F DFL+ + + ++G +++++ M+PGM ++ + +EK +K EA+I
Sbjct: 321 ERMLNQEFNFEDFLESMQQMKKLGPINKLLEMMPGMNSKELKNIDLSSSEKEMKKTEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R++R+A+ SG Q V++L+
Sbjct: 381 SSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLL 419
>gi|407477591|ref|YP_006791468.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
gi|407061670|gb|AFS70860.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
Length = 450
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 170/239 (71%), Gaps = 9/239 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELVDVKEIAKPNEIFLVVDSMTGQDAVNVAESFNEKLGVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++
Sbjct: 262 SIKAVTGAPIKFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAEFQMDATRAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-----ITPAQVREAEKSLKIME 175
K+ A+F F+DF++Q + V +MG + ++GMIPG GK + AQ+ EK L +E
Sbjct: 322 GKMRDASFTFDDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQID--EKQLVYVE 379
Query: 176 AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
A+I++MT ER +PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 380 AIIQSMTKRERTEPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|441499573|ref|ZP_20981753.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
gi|441436656|gb|ELR70020.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
Length = 458
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 164/245 (66%), Gaps = 6/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K+ LNP+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+
Sbjct: 214 MMDEITRLKQALNPSETLFVVDSMTGQDAVNTAKAFNDRLNFDGVVLTKLDGDTRGGAAI 273
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+M+ ++ F+PDRMA RILGMGDV+S VEKAQ+ +E+A +
Sbjct: 274 SIRRVVDKPIKFISTGEKMDAIDKFHPDRMANRILGMGDVVSLVEKAQQTFDEEEARRLN 333
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +
Sbjct: 334 KKIRKNQFDFNDFLSQLEQIKKMGNIKDLMGMIPGMGKALKG-IDVDDDSFKPIEAIIRS 392
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS-- 238
MT EERE+PEL+ S RRKR+A SG + Q+V+ L+ Q M+ MK M M GG
Sbjct: 393 MTNEEREQPELINGS--RRKRIATGSGTSVQEVNNLLKQFNDMKKLMKT-MNKMGGGKKG 449
Query: 239 LPALS 243
L AL+
Sbjct: 450 LAALN 454
>gi|347542415|ref|YP_004857052.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985451|dbj|BAK81126.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 454
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K + NP+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG AL
Sbjct: 201 LMDELREIKEISNPSEILMVIDSMIGQESVNIAETFNEKLDVTGFVLTKLDGDTRGGVAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEV GK IK +G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + QE+A+++
Sbjct: 261 SIKEVIGKNIKFIGVGEKISDLEVFHPDRMASRILGMGDVLSLIEKAQESIDQEEAQKLS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+++ + F+F DF + ++GS S+++ MIPG+G ++ + ++EK L +EA
Sbjct: 321 ERMFANEFNFEDFKSAMHQMKKLGSFSKILQMIPGIGNAMKELKNINLDDSEKELSKIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+I +MT +ER+ P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 381 IINSMTAKERKNPKLLIGSASRKSRIAKGSGSTTAQVNKLIKDFENMSKMMKQFKGM 437
>gi|332667956|ref|YP_004450744.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336770|gb|AEE53871.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 450
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+K++K + P E L VVDAMTGQ+A FN I G +LTK+DGD+RGGAAL
Sbjct: 201 MMAEIKNIKEAILPQETLFVVDAMTGQDAVNTAQVFNETINFDGVVLTKMDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK GKPIK GE+M+ LE FYPDRMA RILGMGD++SFVEKAQE +E A++++
Sbjct: 261 SVKYTVGKPIKFASTGEKMDALELFYPDRMAQRILGMGDIVSFVEKAQEQFDEELAKKLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + +MG + ++GMIPGM K+T V + K +EA+I++
Sbjct: 321 KKIQKNKFDFNDFMAQINQIKKMGDLKSIMGMIPGMDKLT-RNVEIDNNAFKKVEAIIQS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP+ER P+LL S R++R+A+ G+T V+ + Q QMR M N+
Sbjct: 380 MTPKERTNPDLLNMS--RKQRIAKGCGRTLNDVNMFIKQFEQMRKMMHNM 427
>gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
Length = 486
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+ + P E LLVVDAMTGQ AA+L +F+ +GI+GAILTKLDGDSRGGAA+
Sbjct: 208 LMEELRRVKKTVEPDETLLVVDAMTGQAAASLTASFDAAVGISGAILTKLDGDSRGGAAV 267
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSGKPIK VG GE+ DLEPFYPDRMA RILGMGDV+S VEKA + DA +MQ
Sbjct: 268 SIRGVSGKPIKFVGVGEKTNDLEPFYPDRMASRILGMGDVISLVEKASMEVSDADAAKMQ 327
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K+ A FDF+DF+ Q+R V++MGSM+ V M+PGMG I +Q+R+ E+ +K EAMI
Sbjct: 328 EKMAKAEFDFDDFMTQSRMVSKMGSMAGVAKMLPGMGNMIDSSQMRQVEERIKRSEAMIC 387
Query: 180 AMTPEEREKPELLAESPVRRKRV 202
+M +ER P LL R R+
Sbjct: 388 SMNKKERANPGLLLTDKSARSRL 410
>gi|366053084|ref|ZP_09450806.1| signal recognition particle protein [Lactobacillus suebicus KCTC
3549]
Length = 480
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 176/248 (70%), Gaps = 11/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K++ +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELANIKKLADPDEILLVVDAMTGQNAVETAQGFNDKLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M+DL+ F+PDRMA RILGMGD+L+ +EKAQ+ +E A++
Sbjct: 262 SIRAVTGKPIKFVGQGEKMDDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEEQAQKTV 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
+K+ +FDFNDFL Q V +MGSM ++ MIPGM PA ++ A K ++ ++A+
Sbjct: 322 EKMRENSFDFNDFLDQMSQVQKMGSMEDIMKMIPGMAN-NPA-LKNANIDPKDMEHIKAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+ +MTPEERE P++L +P RR+R+A +G+ +V++++ Q QM+ MK + G
Sbjct: 380 VYSMTPEERENPDVL--NPSRRRRLAAGAGRPVVEVNRMIKQFNQMKKMMKQV----SNG 433
Query: 238 SLPALSNL 245
++ + NL
Sbjct: 434 NMSGMENL 441
>gi|393201748|ref|YP_006463590.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|406664625|ref|ZP_11072400.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
gi|327441079|dbj|BAK17444.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|405387473|gb|EKB46897.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
Length = 452
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 169/234 (72%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRGLKEPDEVFLVVDAMTGQDAVNVAQSFNETVGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + E A+E++
Sbjct: 262 SIRSVTEKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDMEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K M+ +F F+DF++Q + V +MG + ++ MIPG K+ V+ EK + +EA+I
Sbjct: 322 EKFMTQSFTFDDFIEQLQAVKKMGPLDELLKMIPGANKMKGLDNVKVDEKQMGRIEAIIY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTP E+ PE+++ S R+KR+A SG T Q+V++L+ Q +M+ MK + G+
Sbjct: 382 SMTPNEKTNPEIISAS--RKKRIATGSGTTIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|283798055|ref|ZP_06347208.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|291074194|gb|EFE11558.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|295091808|emb|CBK77915.1| signal recognition particle protein [Clostridium cf.
saccharolyticum K10]
Length = 452
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 165/230 (71%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ + LL+VDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAAL
Sbjct: 202 MMNELVEIKENVSVDQTLLIVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE FYPDRMA RILGMGD++S ++KA V+ +E A+E+
Sbjct: 262 SIKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSIIDKATAVIDEEKAKELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FD+NDFL Q R + +MG M+ ++ M+PGM ++ + EK ++ +EA+I +
Sbjct: 322 QKLKKAEFDYNDFLDQMRQIKKMGGMASILNMMPGMNQLKDVDLDGNEKVMERVEAIILS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+L+ +P R+KR+A+ +G +V++LV Q QM+ MK L
Sbjct: 382 MTKEERSNPDLI--NPSRKKRIARGAGVDIAEVNRLVKQFEQMKKMMKQL 429
>gi|385809358|ref|YP_005845754.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
gi|383801406|gb|AFH48486.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
Length = 441
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 168/233 (72%), Gaps = 6/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ D+K ++ PTE L VVD+MTGQ+A FN + G +L+KLDGD+RGGAA+
Sbjct: 199 MMKEVADIKEIVKPTETLFVVDSMTGQDAVNSAKAFNETVNFDGIVLSKLDGDARGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V GKPIK V GE++E+L+ FYPDR+A RILG GD++S VEKAQE + + +A++M+
Sbjct: 259 SIRSVVGKPIKFVSNGEKLENLDVFYPDRLASRILGKGDIVSLVEKAQETIDEFEAKKME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ FDF DFLKQ + + +MGS+S +IGMIPG+G +I AQ+ +K+L +EA+I
Sbjct: 319 EKLRKNKFDFEDFLKQIKLIKKMGSLSSLIGMIPGLGSQIKNAQID--DKALVKVEAIIN 376
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT +ERE P++L S RRKR+A+ SG T Q V++L+ Q FQ RM ++M
Sbjct: 377 SMTKQERENPKVLNGS--RRKRIARGSGTTIQDVNRLIKQ-FQEMQRMMSMMN 426
>gi|373954810|ref|ZP_09614770.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
gi|373891410|gb|EHQ27307.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
Length = 442
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ VK LNP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 MMVEIEQVKAALNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQ+ ++ A E+Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIRKNKFDFNDFYGQIQQIKKMGNMKDLMGMIPGVGKAMK-DVEIDDNAFKAIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP E+E P+ + +S RR R+A SG Q+V++L+ Q MR MK +
Sbjct: 379 MTPFEKENPDSINQS--RRNRIANGSGTNLQEVNRLIKQFDDMRKVMKQM 426
>gi|28210935|ref|NP_781879.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
gi|28203374|gb|AAO35816.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
Length = 451
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 169/235 (71%), Gaps = 2/235 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P EVLLVVD+MTGQ+A + +FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKENIEPNEVLLVVDSMTGQDAINVAESFNEKLNISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK +G GE+M DLE FYP+RMA RILGMGDVLS +EKA++ + +++AE++
Sbjct: 261 SIKAMTGKPIKFIGIGEKMNDLEVFYPERMASRILGMGDVLSLIEKAEQEIDKDEAEKIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+IM+ F+ DFL + + ++G +++++ M+PG ++ + EK LK +E++I
Sbjct: 321 SRIMNQEFNLEDFLSAMQQMKKLGPLNKLVEMLPGANSKELKGIDFDKGEKDLKRIESII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT +ER+ P L++ SP R+KR+A SG T QQV++++ MR MK + G+
Sbjct: 381 SSMTIKERKNPSLVSGSPTRKKRIANGSGTTVQQVNKILKDFENMRKMMKQMNGI 435
>gi|387793034|ref|YP_006258099.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
gi|379655867|gb|AFD08923.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
Length = 444
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ DVK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIADVKAATKPHEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIRKNKFDFNDFLSQLNQIKKMGNIKDLMGMIPGVGKAIK-DVDIDDDAFKHIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ERE PEL+ + RR+R+A SG + +V++L+ Q MR MK
Sbjct: 379 MTPTERENPELINGN--RRQRIANGSGTSIAEVNKLLKQFEDMRKMMK 424
>gi|325955366|ref|YP_004239026.1| signal recognition particle protein [Weeksella virosa DSM 16922]
gi|323437984|gb|ADX68448.1| signal recognition particle protein [Weeksella virosa DSM 16922]
Length = 458
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 158/228 (69%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE++ V NPTE L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIRRVHAATNPTETLFVVDSMTGQDAVNTARAFNDVLDYSGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK + GE+ME L+ FYP RMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 TIKTVVDKPIKFISTGEKMEALDLFYPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI NFDF+DFLKQ + + RMG+M ++GMIPG GK V + + K +EA+I +
Sbjct: 320 KKIAKNNFDFDDFLKQIQQIKRMGNMKDLVGMIPGAGK-ALKDVEINDDAFKGVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP+ER+ P+++ S R+ R+A+ SG + Q+V+QL+ Q +M MK
Sbjct: 379 MTPQERKNPKIIDNS--RKNRIAKGSGTSIQEVNQLLKQFSEMGKMMK 424
>gi|336324196|ref|YP_004604163.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
gi|336107777|gb|AEI15595.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
Length = 449
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 163/224 (72%), Gaps = 4/224 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K+ ++P E+L V DAMTGQ+A + T FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 203 LMDELFNIKKAVSPDEILFVADAMTGQDAVNVATKFNNDLDISGVILTKLDGDARGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKP+K VG GE+++ EPFYPDRMA RILGMGDV+S VE AQ+ +++++AE++
Sbjct: 263 SIREVTGKPLKYVGVGEKLDAFEPFYPDRMASRILGMGDVVSLVEMAQDAIEEDEAEKLA 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ DFND L Q + + +MGS ++ ++PGMG + A V E + +K +EA+I +
Sbjct: 323 DKVSKGGMDFNDMLSQFKMIRKMGSFESIMKLMPGMGNMKKADVDEDQ--IKKIEAIINS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
MTP ER +LL S R+KR+A+ SG + V++L++QL QM
Sbjct: 381 MTPRERRYYKLLNGS--RKKRIARGSGTSVSDVNKLISQLQQMN 422
>gi|171912491|ref|ZP_02927961.1| signal recognition particle protein [Verrucomicrobium spinosum DSM
4136]
Length = 479
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 164/229 (71%), Gaps = 4/229 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+++EL +K V+ P EVLLV DA TGQ+A ++ TFN IGITG ++TKLDGD+RGGA L
Sbjct: 199 LLEELIKIKNVVQPREVLLVADAATGQQAVSVAKTFNDAIGITGLVMTKLDGDARGGALL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K+V+G P+K VG GE+++ LE F+PDRMA RILGMGDV+S VEKA + + +EDA +
Sbjct: 259 SMKQVTGCPVKFVGMGEKIDQLEVFHPDRMAQRILGMGDVVSLVEKAADAINEEDAMRIA 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K++ A FDFNDFL Q + + ++G + ++GM+PGMG + V EK +K +EA+I +
Sbjct: 319 KRVQEAKFDFNDFLGQMKFMRKLGPLESILGMLPGMGALKGLNVE--EKRMKHVEAIILS 376
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKN 229
MT +ER KPELL S RRKR+A SG+ +V+QL+ Q MR M+N
Sbjct: 377 MTAKERTKPELLNGS--RRKRIANGSGRPVVEVNQLLKQFEMMRKLMRN 423
>gi|397569853|gb|EJK47015.1| hypothetical protein THAOC_34296 [Thalassiosira oceanica]
Length = 577
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 154/203 (75%), Gaps = 1/203 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+ ++P E LLVVDAMTGQ AA+L +F+ +GI+GAILTKLDGDSRGGAA+
Sbjct: 290 LMEELRRVKKSVSPDETLLVVDAMTGQAAASLTASFDSAVGISGAILTKLDGDSRGGAAV 349
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ VSGKPIK VG GE+ +LEPF+PDRMA RILGMGDV+S VEKA + DA++MQ
Sbjct: 350 SIRGVSGKPIKFVGVGEKTAELEPFFPDRMASRILGMGDVVSLVEKASMEVSDADAKKMQ 409
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K++ A FDF+DF++Q++ V+ MGSM+ V M+PGMG I +Q+++ E +K EAMI
Sbjct: 410 EKMVKAQFDFDDFMQQSKMVSSMGSMAGVAKMLPGMGNMIDNSQLKQVEMRIKRSEAMIC 469
Query: 180 AMTPEEREKPELLAESPVRRKRV 202
+MT +ER PELL R RV
Sbjct: 470 SMTKKERANPELLLTDKTARSRV 492
>gi|311030155|ref|ZP_07708245.1| signal recognition particle protein [Bacillus sp. m3-13]
Length = 448
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 170/231 (73%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEISNPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK +G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SVKAVTNTPIKYIGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQSNVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + NF F+DFL+Q V MG + ++GMIPG K+ + V+ EK + +EA+I+
Sbjct: 322 QKLRTMNFTFDDFLEQLGQVRNMGPLDEILGMIPGANKMKGLKNVQVDEKQIGHVEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+L+ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 382 SMTKAEKDNPDLINAS--RKKRIAKGSGRPIQEVNRLLKQFEEMKKMMKQM 430
>gi|436835876|ref|YP_007321092.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
gi|384067289|emb|CCH00499.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
Length = 439
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 164/242 (67%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ VK+ +NP+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMQEIEQVKKAINPSETLFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++A +
Sbjct: 259 SIRAVVSKPIKFMSTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDDDEARRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ FDFNDFL Q + + +MG++ ++GMIPGMGK+ + S +EA+I +
Sbjct: 319 AKMRKNQFDFNDFLSQLQQIKKMGNIKDLLGMIPGMGKMVK-DLDLDNASFAPIEAIISS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ERE+P+++ +S R++R+A SG +EQQV+ L+ Q +MR MK + + G L
Sbjct: 378 MTPKERERPDMIDKS--RKRRIALGSGTSEQQVTNLLKQFDEMRKMMKKMNQMQASGKLA 435
Query: 241 AL 242
+
Sbjct: 436 KM 437
>gi|260912277|ref|ZP_05918828.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
gi|260633578|gb|EEX51717.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
Length = 450
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K+ LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIYRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMMTG 428
>gi|310779168|ref|YP_003967501.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ilyobacter
polytropus DSM 2926]
gi|309748491|gb|ADO83153.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ilyobacter
polytropus DSM 2926]
Length = 447
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 172/242 (71%), Gaps = 8/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELKD+K+ P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 LMEELKDIKKATRPQEILLVVDAMIGQDAVNLAESFNNSLNIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V GKPIK +G GE+++D+E F+P+R+ RILGMGDV+S VEKAQE + ++DA+ ++
Sbjct: 260 SIKAVVGKPIKFIGIGEKIDDIELFHPERLVSRILGMGDVVSLVEKAQEAIDEDDAKSLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI + +FD DFLKQ + + ++G + ++ M+PG G++ + AEK +K +EA+I++
Sbjct: 320 EKIKNQSFDLEDFLKQLQNIKKLGPLGGILKMLPGAGQL--GDLAPAEKEMKKVEAVIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EER+KPE+L S R+KR+A+ SG V++L+ Q Q MK +M + G+ P
Sbjct: 378 MTREERKKPEILKAS--RKKRIAKGSGVEVSDVNKLLKQFDQ----MKQVMKMFSNGNFP 431
Query: 241 AL 242
+
Sbjct: 432 QM 433
>gi|295115824|emb|CBL36671.1| Signal recognition particle GTPase [butyrate-producing bacterium
SM4/1]
Length = 251
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 165/230 (71%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ + LL+VDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAAL
Sbjct: 1 MMNELVEIKENVSVDQTLLIVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAAL 60
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE FYPDRMA RILGMGD++S ++KA V+ +E A+E+
Sbjct: 61 SIKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSIIDKATAVIDEEKAKELS 120
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FD+NDFL Q R + +MG M+ ++ M+PGM ++ + EK ++ +EA+I +
Sbjct: 121 QKLKKAEFDYNDFLDQMRQIKKMGGMASILNMMPGMNQLKDVDLDGNEKVMERVEAIILS 180
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P+L+ +P R+KR+A+ +G +V++LV Q QM+ MK L
Sbjct: 181 MTKEERSNPDLI--NPSRKKRIARGAGVDIAEVNRLVKQFEQMKKMMKQL 228
>gi|160938805|ref|ZP_02086156.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
gi|158437768|gb|EDP15528.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
Length = 458
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMDELVEIKDNLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ A FD+NDFL Q + + +MG M ++ M+PGMG +++ + E EKS+ +E++I
Sbjct: 322 QKLRKAEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGVDMDEGEKSMHRVESIIL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EER P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 382 SMTKEERANPNLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|354584950|ref|ZP_09003841.1| signal recognition particle protein [Paenibacillus lactis 154]
gi|353191067|gb|EHB56576.1| signal recognition particle protein [Paenibacillus lactis 154]
Length = 459
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/249 (47%), Positives = 177/249 (71%), Gaps = 5/249 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHSAVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDAEKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGG 237
+MT EE+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG
Sbjct: 381 SMTTEEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGG 438
Query: 238 SLPALSNLE 246
AL L+
Sbjct: 439 KNKALKQLK 447
>gi|288928375|ref|ZP_06422222.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288331209|gb|EFC69793.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 450
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K+ LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIYRLKQALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMMTG 428
>gi|269120474|ref|YP_003308651.1| signal recognition particle protein [Sebaldella termitidis ATCC
33386]
gi|268614352|gb|ACZ08720.1| signal recognition particle protein [Sebaldella termitidis ATCC
33386]
Length = 444
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 166/228 (72%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K +P E+LLVVD MTGQ+A + TFN ++ I+G +LTKLDGD+RGGAAL
Sbjct: 200 LMNELKEIKENFHPDEILLVVDGMTGQDAVNVAKTFNEDLDISGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEVSGKPIK + GE+++D+ F+PDR+A RILGMGDV+S VEKAQEV+ +++A++M+
Sbjct: 260 SIKEVSGKPIKFISDGEKLDDVSAFHPDRLASRILGMGDVVSLVEKAQEVIDEDEAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K FDF DFLKQ + + +MGS+ ++ +IPG+ + + AEK +K +EA+I +
Sbjct: 320 EKFRKNQFDFEDFLKQFKMIKKMGSLGNIMKLIPGV-DTSAIDMAMAEKEMKKVEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ER P+LL R+KR+A SG +V++L+ Q QM+ MK
Sbjct: 379 MTVQERRDPKLLKNGG-RKKRIAGGSGTEVTEVNKLIKQYEQMKQVMK 425
>gi|291542195|emb|CBL15305.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
bromii L2-63]
Length = 469
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ + P E+LLV+D+MTGQ+A + +FN + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKKEVEPNEILLVIDSMTGQDAVNVAKSFNELLDITGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G+PIK G GE+++D+E F+PDRMA RILGMGDVL+ +E AQ M E AEEM
Sbjct: 260 SVKAVTGRPIKFAGTGEKLDDIEVFHPDRMASRILGMGDVLTLIEDAQNKMDAEKAEEMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+MS FDFND Q V +MG + ++ IPG+GK V ++ + ++A+I +
Sbjct: 320 QKMMSNKFDFNDLYDQFEQVKKMGPLKGILSKIPGVGKQLEG-VDIDDRQIDWVQAIILS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTPEER P ++ +P R++R+A SG++ ++V++L+ Q+ QM+ M+ +
Sbjct: 379 MTPEERSHPHIM--NPSRKRRIAAGSGRSIEEVNRLIKQIDQMQKMMRQM 426
>gi|20807909|ref|NP_623080.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
gi|20516476|gb|AAM24684.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
Length = 447
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 163/228 (71%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K ++P E+LLV DAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELVRIKEAVHPDEILLVADAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK VG GE++ D+EPFYPDRMA RILGMGDVL+ +EKAQ + ++ A EM
Sbjct: 262 SIKAVTQKPIKYVGIGEKLGDIEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKALEMG 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI+S F DFL+Q R++ MG + +++ MIPG+ K V +EK LK +EA+I +
Sbjct: 322 QKILSKQFTLEDFLEQLRSLKNMGPLDQLLAMIPGVNKSVLKNVEVSEKDLKRIEAIILS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT EER+ P ++ S R++R+A+ SG T Q+V+ L+ Q + + MK
Sbjct: 382 MTKEERQNPSIINGS--RKRRIARGSGTTIQEVNNLLKQFEETKKMMK 427
>gi|255655263|ref|ZP_05400672.1| signal recognition particle protein [Clostridium difficile
QCD-23m63]
Length = 452
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 171/254 (67%), Gaps = 11/254 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-- 236
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G +
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMK 438
Query: 237 -----GSLPALSNL 245
G LP L+ +
Sbjct: 439 KRGGLGGLPFLNKI 452
>gi|229552446|ref|ZP_04441171.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539816|ref|YP_003174315.1| signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|385835468|ref|YP_005873242.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|418070818|ref|ZP_12708093.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|421768780|ref|ZP_16205490.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|421771068|ref|ZP_16207729.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
gi|423078848|ref|ZP_17067525.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|229314183|gb|EEN80156.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151492|emb|CAR90464.1| Signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|355394959|gb|AER64389.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|357540238|gb|EHJ24255.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|357549136|gb|EHJ30984.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|411185629|gb|EKS52756.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|411186503|gb|EKS53627.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
Length = 478
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 171/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMTELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++
Sbjct: 382 SMTPKEREDPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNM 435
Query: 240 PALSNL 245
L L
Sbjct: 436 KGLDGL 441
>gi|423090839|ref|ZP_17079125.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
gi|357555954|gb|EHJ37576.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
Length = 450
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 164/234 (70%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|255100269|ref|ZP_05329246.1| signal recognition particle protein [Clostridium difficile
QCD-63q42]
gi|255306209|ref|ZP_05350381.1| signal recognition particle protein [Clostridium difficile ATCC
43255]
gi|423082359|ref|ZP_17070951.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
gi|423087751|ref|ZP_17076137.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357544065|gb|EHJ26071.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357548685|gb|EHJ30545.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
Length = 450
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 164/234 (70%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|390986549|gb|AFM35794.1| hypothetical protein, partial [Oryza eichingeri]
Length = 127
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/127 (88%), Positives = 119/127 (93%)
Query: 32 LVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMA 91
LVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK V RGERMEDLE FYPDRMA
Sbjct: 1 LVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVERGERMEDLELFYPDRMA 60
Query: 92 GRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIG 151
R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFNDFLKQ++ VA+MGSMSRV+G
Sbjct: 61 QRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAQMGSMSRVVG 120
Query: 152 MIPGMGK 158
MIPGM K
Sbjct: 121 MIPGMNK 127
>gi|363583065|ref|ZP_09315875.1| signal recognition particle protein [Flavobacteriaceae bacterium
HQM9]
Length = 442
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 154/220 (70%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + +NP+E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEISNIHKAINPSETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VEKAQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDIFYPSRMADRILGMGDVVSLVEKAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MG++ ++GMIPGMGK+ + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMVKDV-DVDDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER P+L+ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 379 MTPEERANPQLINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|317055139|ref|YP_004103606.1| signal recognition particle protein [Ruminococcus albus 7]
gi|315447408|gb|ADU20972.1| signal recognition particle protein [Ruminococcus albus 7]
Length = 458
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K++ P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAAL
Sbjct: 200 LMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+ +EKA + + +E+AE++
Sbjct: 260 SVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLTLIEKASQTVDEEEAEKLA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ FD ND L+Q + + +MGS+ +I M+PG K++ + E +LK EAMI +
Sbjct: 320 KKMQEEGFDLNDLLEQMKQIHKMGSIKNIISMLPGANKVSDEDLEMGEAALKKTEAMIHS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER+KP ++ P R++R+A SG V+QL+ Q M+ MK
Sbjct: 380 MTKAERKKPAII--DPKRKRRIAAGSGTQVSDVNQLLKQYEDMKKMMKQF 427
>gi|333371175|ref|ZP_08463137.1| signal recognition particle protein [Desmospora sp. 8437]
gi|332976619|gb|EGK13460.1| signal recognition particle protein [Desmospora sp. 8437]
Length = 449
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELK ++ + P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD+RGGAAL
Sbjct: 200 MMGELKAIREKVQPDEILLVVDAMTGQDAVNVAESFNRELGLTGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ P+K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A++++
Sbjct: 260 SVKSVTDCPVKFVGMGEKVDALEPFHPERMASRILGMGDVLTLIEKAQASVDQEKAKDLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + F F+DFL+Q V MG + ++GM+PGMG++ + ++ EK L +EA+I
Sbjct: 320 RKLRTQQFTFDDFLEQMEQVRNMGPLDELLGMMPGMGQMKNMKNLQVDEKQLTKVEAIIR 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE++ PE++ RR+R+A SG T Q V++L+ Q M+ MKN
Sbjct: 380 SMTREEKQNPEIINAG--RRRRIAAGSGTTVQDVNRLIKQFMDMKKMMKNF 428
>gi|126698849|ref|YP_001087746.1| signal recognition particle protein [Clostridium difficile 630]
gi|115250286|emb|CAJ68108.1| Signal recognition particle protein [Clostridium difficile 630]
Length = 450
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 164/234 (70%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|295397866|ref|ZP_06807929.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
gi|294973911|gb|EFG49675.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
Length = 484
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 165/246 (67%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K + P E+LL VD+MTGQEAA + F+ E+ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMTELKDIKAAVEPDEILLTVDSMTGQEAANVAKAFDEELDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ V+GKPIK G GE++ ++E FYPDRMA RILGMGD+L+ +EKAQ + +AE M
Sbjct: 262 SIVSVTGKPIKFTGTGEKLNEIERFYPDRMANRILGMGDMLTLIEKAQAEFDENEAEAMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
K+ +DFNDF+K + +MGSM ++ MIPGM K+ + K + +AMI+
Sbjct: 322 AKMRENTYDFNDFIKNMDQMNKMGSMKDILKMIPGMNKLGNLDDLNIDPKQMAQTKAMIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ERE P+ + +S RR+R+A+ S T Q+V++L+ Q + R LM M G++
Sbjct: 382 SMTPYERENPDSINQS--RRRRIAKGSATTLQEVNRLIKQFNESR----KLMSAMSNGNM 435
Query: 240 PALSNL 245
AL N+
Sbjct: 436 GALQNM 441
>gi|253573492|ref|ZP_04850835.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847020|gb|EES75025.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ + V NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELRQIHEVTNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDAEKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ Q V+ EK + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMEQVKKLGPLDQLMDMIPGMGKMKQMQNVKVDEKQMSRVEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT EE++ P+++ S RRKR+A SG T V++L+ Q +MR MK +M
Sbjct: 381 SMTKEEKQNPDMINHS--RRKRIAAGSGTTLADVNRLIKQFDEMRRVMKQFSDMM 433
>gi|296451248|ref|ZP_06892988.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296880400|ref|ZP_06904363.1| signal recognition particle protein [Clostridium difficile NAP07]
gi|296259854|gb|EFH06709.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296428641|gb|EFH14525.1| signal recognition particle protein [Clostridium difficile NAP07]
Length = 450
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 164/234 (70%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|220931573|ref|YP_002508481.1| signal recognition particle protein [Halothermothrix orenii H 168]
gi|219992883|gb|ACL69486.1| signal recognition particle protein [Halothermothrix orenii H 168]
Length = 444
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 167/238 (70%), Gaps = 5/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDELK +K + P E+LLVVDAMTGQ+A + F+ +GI G ILTKLDGD+RGGAAL
Sbjct: 201 MMDELKSIKSNVRPHEILLVVDAMTGQDAVNVAENFSESLGIDGIILTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIK VG GE+++ LE F+PDRM+ RILGMGDVLS +EKA+ + + AEE++
Sbjct: 261 SIKAVTGKPIKFVGMGEKLDALESFHPDRMSSRILGMGDVLSLIEKAEASIDAKKAEELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KKI F DFL+Q + V MG + +++GMIPG+ G++ QV EK L +EA+I
Sbjct: 321 KKIRQNEFSLEDFLEQLQQVRNMGPLDQILGMIPGVSGQLKNLQVD--EKQLDRIEAIIN 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MT EER+ PE++ S RR+R+A+ SG Q V++L+ Q Q + MK L G+ + G
Sbjct: 379 SMTIEERKNPEIINGS--RRRRIARGSGTKIQDVNRLLKQFKQTKKMMKQLNGMQKSG 434
>gi|403234825|ref|ZP_10913411.1| signal recognition particle protein [Bacillus sp. 10403023]
Length = 446
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 170/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK V P E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEVAQPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK VG GE+++ +E F+P+RMA RILGMGDVLS +EKAQ + ++ A+E++
Sbjct: 262 SVKAVTNTPIKFVGLGEKLDAIEAFHPERMASRILGMGDVLSLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK S +F F+DFL+Q V +MG + ++GM+PG K+ + V+ +K + +EA+I
Sbjct: 322 KKFKSMSFTFDDFLEQLAQVRKMGPLDEILGMLPGANKMKGLKNVQVDDKQIGHVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT ERE+PE++ S R+KR+A+ SG+T Q+V++L+ Q M+ MK + + +G
Sbjct: 382 SMTKAEREQPEIINSS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMMKQMTNMTKG 436
>gi|387133281|ref|YP_006299253.1| signal recognition particle protein [Prevotella intermedia 17]
gi|386376129|gb|AFJ09513.1| signal recognition particle protein [Prevotella intermedia 17]
Length = 450
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 164/245 (66%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE++ +K +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S RR+R+A+ SG Q+V++LV Q Q R MK + G G +
Sbjct: 379 MTPKERTNPEVLNNS--RRQRIAKGSGTNIQEVNRLVKQFEQTRKMMKMVTGSKMAGMMG 436
Query: 241 ALSNL 245
+ N+
Sbjct: 437 KMKNM 441
>gi|225419757|ref|ZP_03762060.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
gi|225041594|gb|EEG51840.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
Length = 459
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 168/234 (71%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K L+ + +LVVDAMTGQ+A + TFN +IGI G +LTKLDGD+RGGAAL
Sbjct: 203 MMDELVEIKDQLDVHQTILVVDAMTGQDAVNVSETFNNKIGIDGVVLTKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD++S +EKA + +E A EM
Sbjct: 263 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSLIEKATAEIDEEQAREMT 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ A FD+NDFL Q + + ++G M ++ M+PG+G +++ + E EKS+K +E++I
Sbjct: 323 QKLRKAEFDYNDFLAQMQQIKKIGGMGSILSMLPGVGNQLSGVDMDEGEKSMKRVESIIL 382
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT +ER P L+ +P R+KR+A+ +G +V++LV Q QM+ MK + G+
Sbjct: 383 SMTKDERANPGLI--NPSRKKRIARGAGVDISEVNRLVKQFDQMKKMMKQMPGM 434
>gi|392394728|ref|YP_006431330.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525806|gb|AFM01537.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMGELRDIKASVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM+
Sbjct: 259 SVKAVTGCPIKFAGIGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTPEER KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 378 MTPEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|313885163|ref|ZP_07818915.1| signal recognition particle protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619854|gb|EFR31291.1| signal recognition particle protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 489
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K +NP E+LL VDAMTGQ+A + FN + ITG ++TKLDGD+RGGAAL
Sbjct: 203 LMDELRNIKAAVNPDEILLTVDAMTGQDAVNVADAFNEALDITGVVITKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ + KPIK G+GE+++ LEPFYPDRM+ RILGMGD+++ +EKAQ+ + +AE+M
Sbjct: 263 SIRSIIDKPIKFTGQGEKLDALEPFYPDRMSSRILGMGDMMTLIEKAQKDFDEAEAEKMA 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI A+FDFNDF+ Q V +MGS+ +I MIPGM KI P + +EK + ++A++
Sbjct: 323 GKIKDASFDFNDFVAQMDQVNKMGSIKDIIKMIPGMNKI-PGLDEFDVSEKEMLRVKAIV 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
++MTP ERE P+ +++S RR+R+A+ G Q V+QL+ Q Q R +M M G
Sbjct: 382 QSMTPYERENPDEISQS--RRRRIAKGCGLDLQAVNQLIKQFNQTR----QVMSQMSNGK 435
Query: 239 LPALSNL 245
+ ++ +
Sbjct: 436 MSGMNKM 442
>gi|259046590|ref|ZP_05736991.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
gi|259036755|gb|EEW38010.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
Length = 478
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 169/243 (69%), Gaps = 7/243 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K V NP+E+LLVVD+MTGQ+A + TFN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELQNIKAVANPSEILLVVDSMTGQDAVNVAQTFNERLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM
Sbjct: 262 SIRSVTGKPIKFTGRGEKLEDFEIFYPERMASRILGMGDMMTLIEKAQQDFDEAKAQEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KI + FDFNDF+ Q V +MG + ++ MIPG+ K+ ++ K M+A++
Sbjct: 322 DKIKANTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKMAGLNDLKVDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P++L+++ RRKR+A S + +V++L+ Q + K +M M G++
Sbjct: 382 SMTPQERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNM 435
Query: 240 PAL 242
L
Sbjct: 436 KGL 438
>gi|406669313|ref|ZP_11076592.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
gi|405583826|gb|EKB57757.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
Length = 496
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 169/232 (72%), Gaps = 5/232 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K ++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAAL
Sbjct: 203 LMNELRNIKSAVHPDEILLTVDAMTGQDATNVAEAFNDALDITGVIITKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++ KPIK G+GE+++ LEPF+PDRMAGRILGMGD+L+ +EKAQ+ + +AE M
Sbjct: 263 SIRAITEKPIKFTGQGEQLDALEPFHPDRMAGRILGMGDMLTLIEKAQQDFDEAEAERMA 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI A+FDFNDF++Q V +MG + ++ +IPG+ KI P Q ++K + ++ ++
Sbjct: 323 EKIKDASFDFNDFIQQMDQVTKMGPLKDLMKLIPGVNKI-PGFDQFDVSDKDMARLKGIV 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEERE P+++++S RR+R+A+ SG+ +V+QL+ Q Q R M +
Sbjct: 382 MSMTPEERENPDIISQS--RRRRIARGSGRELNEVNQLIKQFNQTRKMMSQM 431
>gi|354559586|ref|ZP_08978833.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353541223|gb|EHC10692.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 465
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 162/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMGELRDIKATVRPHEILLVVDAMTGQDAVNVAESFHSELGVDGIILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK G GE+ME LEPFYP+RMA RILGMGDVL+ +EKAQ ++ A EM+
Sbjct: 259 SIKAVTGCPIKFAGIGEKMEALEPFYPERMASRILGMGDVLTLIEKAQSAFDEKQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQIKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHVEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP ++ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 378 MTTEERRKPAIIKDS--RKRRIAKGSGTSIQEVGRLIKQFEQMQKMMKQF 425
>gi|377556838|ref|ZP_09786517.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
gi|376167268|gb|EHS86121.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
Length = 483
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 174/260 (66%), Gaps = 9/260 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + +P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKALAHPDEILLVVDAMTGQNAVNTAEGFDEKLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+ME+L+ FYPDRM+ RILGMGD+L+ +EKAQ+ +E A E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMENLDVFYPDRMSSRILGMGDMLTLIEKAQKNFDEEQAAETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ NFD+NDFL Q V++MG + +I M+PGM PA + K ++A+I
Sbjct: 322 RKMQENNFDYNDFLDQMDQVSKMGPLEDLIKMMPGMAN-NPALKNINIDPKQFLHIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
++MTPEERE P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + G+
Sbjct: 381 QSMTPEERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFDQMRKMMKQV----TNGN 434
Query: 239 LPALSNLEDALKSEQKAPPG 258
L + N+ L + P G
Sbjct: 435 LNGMENMMGGLGNMPGMPGG 454
>gi|118443987|ref|YP_878286.1| signal recognition particle protein [Clostridium novyi NT]
gi|118134443|gb|ABK61487.1| signal recognition particle protein [Clostridium novyi NT]
Length = 451
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 160/219 (73%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K + P E+LLVVD+MTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMEELENIKGSVEPNEILLVVDSMTGQDAVNVSETFNNKLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+
Sbjct: 261 SIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K+++ F+ DF + +MG ++++I MIPG+ ++ + EK +K +EAMI
Sbjct: 321 DKMLNLEFNLEDFKDSMAQMKKMGPLTKIIEMIPGVNSKQLQGLDLSRGEKEIKKIEAMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER P L+A SP R++R+A SG QQV++L+
Sbjct: 381 DSMTLKERRDPNLVASSPSRKRRIANGSGCNVQQVNKLL 419
>gi|325680130|ref|ZP_08159696.1| signal recognition particle protein [Ruminococcus albus 8]
gi|324108205|gb|EGC02455.1| signal recognition particle protein [Ruminococcus albus 8]
Length = 457
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 164/233 (70%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K++ P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAAL
Sbjct: 200 LMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPIK VG GE++++ EPF+P+RMA RILGMGD+L+ +E+A + + +E+AE++
Sbjct: 260 SVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRILGMGDMLTLIERATQTVDEEEAEKLA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ S FD ND L Q + + +MGS+ +I M+PG KIT + E +L+ EAMI +
Sbjct: 320 KKLQSEGFDLNDLLDQMKQIQKMGSVKSIIQMLPGANKITDEDLESGEAALRKTEAMINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT ER +P+++ P R++R+A SG V+QL+ Q M+ MK MG+
Sbjct: 380 MTKAERARPQII--DPKRKRRIAAGSGTQVSDVNQLLKQYDAMKKMMKE-MGI 429
>gi|418008198|ref|ZP_12648066.1| signal recognition particle subunit [Lactobacillus casei UW4]
gi|410547142|gb|EKQ21380.1| signal recognition particle subunit [Lactobacillus casei UW4]
Length = 478
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDIAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|153954026|ref|YP_001394791.1| hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219854640|ref|YP_002471762.1| hypothetical protein CKR_1297 [Clostridium kluyveri NBRC 12016]
gi|146346907|gb|EDK33443.1| Hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219568364|dbj|BAH06348.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 449
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 168/238 (70%), Gaps = 2/238 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K +NP E+LLVVD+MTGQ+A + ++FN ++ I G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKQIKENINPQEILLVVDSMTGQDAVNVASSFNEQLNINGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E+A+++
Sbjct: 261 SIRAITGKPIKFVGMGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEEAKKLG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMI 178
++++ F+F DFL ++G +S++I M+PG M ++ + EK + +EA+I
Sbjct: 321 DRMLNKEFNFEDFLALMAQTKKLGPISKLIEMVPGVNMKELKGVDLSRGEKEMVKIEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT +ER KP +++ S R+KR+A SG Q V++L+ +++ MK G+ +G
Sbjct: 381 NSMTLKERRKPSIVSGSSSRKKRIAAGSGTNIQTVNKLLKDFEKIKKTMKQFNGMKKG 438
>gi|260583609|ref|ZP_05851357.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
gi|260158235|gb|EEW93303.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
Length = 478
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 167/243 (68%), Gaps = 7/243 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K V NP E+LLVVD MTGQ+A + TFN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELQNIKAVANPNEILLVVDVMTGQDAVNVAETFNERLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM
Sbjct: 262 SIRSVTGKPIKFSGRGEKLEDFEIFYPERMASRILGMGDIMTLIEKAQQDFDEAKAQEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KI + FDFNDF+ Q V +MG + ++ MIPG+ KI ++ K M+A++
Sbjct: 322 DKIKANTFDFNDFIDQLDQVNKMGPLEDILKMIPGLNKIPGLNDLKVDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ERE P++L+++ RRKR+A S + +V++L+ Q + K +M M G++
Sbjct: 382 SMTPAERENPDILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNM 435
Query: 240 PAL 242
A+
Sbjct: 436 QAM 438
>gi|418005311|ref|ZP_12645306.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
gi|410547240|gb|EKQ21477.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
Length = 478
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|431794557|ref|YP_007221462.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784783|gb|AGA70066.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 165/233 (70%), Gaps = 5/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K + P E+LLVVDAMTGQ+A + +F+ ++GI G I+TKLDGD+RGGAAL
Sbjct: 199 LMGELKDIKAAVKPHEILLVVDAMTGQDAVNVAESFHGDLGIDGIIMTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+++ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A EM+
Sbjct: 259 SVKAVTGCPIKFAGIGEKLDAIEPFFPDRMASRILGMGDVLTLIEKAQEAFDEKQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K+ F +DFL Q + + +MG + ++ MIPG GK + AQ+ EK + +EA+I
Sbjct: 319 QKLRKQEFTLDDFLDQMQQIKKMGPLGSLLEMIPGAGKQLKDAQID--EKDMSHVEAIIH 376
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK G
Sbjct: 377 SMTQEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQFAG 427
>gi|212703525|ref|ZP_03311653.1| hypothetical protein DESPIG_01570 [Desulfovibrio piger ATCC 29098]
gi|212673025|gb|EEB33508.1| signal recognition particle protein [Desulfovibrio piger ATCC
29098]
Length = 502
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 162/236 (68%), Gaps = 6/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K +NP E+L V DAMTGQ+A + +FN +G+TG +LTK+DGD+RGGAAL
Sbjct: 200 LMQELAAIKAAVNPQEILFVADAMTGQDAVTVAESFNERLGLTGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G P+K VG GE++ ++E F+PDR+AGRILGMGDVL+ VEKAQ + ++AE +
Sbjct: 260 SIRAVTGAPVKFVGMGEKLSEMEIFHPDRIAGRILGMGDVLTLVEKAQATIDADEAEALA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
KK+ A+FD DF Q R + ++GS+ ++ MIPGMG K+ A EK + EA
Sbjct: 320 KKMRKASFDLEDFRTQMRRIKKLGSLDSILKMIPGMGGLREKLAEANGAMPEKEMARTEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+I +MT ER P++L S RR R+A+ +G T QQV+QLV Q QMR MK +MG
Sbjct: 380 IINSMTMAERRNPDILNGS--RRARIAKGAGVTVQQVNQLVRQFEQMRQMMKGMMG 433
>gi|191638588|ref|YP_001987754.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227534903|ref|ZP_03964952.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239631962|ref|ZP_04674993.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066648|ref|YP_003788671.1| signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|385820302|ref|YP_005856689.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|385823497|ref|YP_005859839.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|417980376|ref|ZP_12621056.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|417983618|ref|ZP_12624254.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|417986977|ref|ZP_12627539.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|417993117|ref|ZP_12633467.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|417996469|ref|ZP_12636748.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|417999336|ref|ZP_12639546.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|418011036|ref|ZP_12650805.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
gi|190712890|emb|CAQ66896.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227187659|gb|EEI67726.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239526427|gb|EEQ65428.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439055|gb|ADK18821.1| Signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|327382629|gb|AEA54105.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|327385824|gb|AEA57298.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|410524041|gb|EKP98958.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|410524699|gb|EKP99606.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|410527887|gb|EKQ02749.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|410532029|gb|EKQ06740.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|410535315|gb|EKQ09940.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|410539356|gb|EKQ13889.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|410553084|gb|EKQ27092.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
Length = 478
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|365853514|ref|ZP_09393781.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
gi|363712139|gb|EHL95838.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
Length = 478
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++P E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKNIKEAVHPNEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ ++ A+E+
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI +FDFNDFL Q + +MG + ++ MIPGM PA V K + ++A+I
Sbjct: 322 EKIKENSFDFNDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPAMKNVNMDPKDMDHLKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT +ER P+++ +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G+
Sbjct: 381 YSMTEQERTDPDIM--NPSRRRRIARGSGRPIQEVNRMIKQFNQ----MKTMMNKVSKGN 434
Query: 239 LPALSNL 245
+ + N+
Sbjct: 435 MSGMENM 441
>gi|366085823|ref|ZP_09452308.1| signal recognition particle protein [Lactobacillus zeae KCTC 3804]
Length = 478
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 172/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKALAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+E+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAQEVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQERENPDLL--NPSRRRRIAGGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|418014537|ref|ZP_12654133.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
gi|410553585|gb|EKQ27587.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
Length = 478
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 170/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQNNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|408672491|ref|YP_006872239.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
gi|387854115|gb|AFK02212.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
Length = 438
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 166/245 (67%), Gaps = 9/245 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++++K+ + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMKEVEEIKKAITPSEILFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +E++ +
Sbjct: 259 SIKAVVNKPIKFISTGEKMEALDIFYPDRMASRILGMGDVISLVERAQQAFDEEESRRLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE---AEKSLKIMEAM 177
KK+ FD NDFL Q + +MG++ ++GMIPG+G +Q+++ + S K +EA+
Sbjct: 319 KKMRENKFDLNDFLTQLEQIKKMGNIKDLMGMIPGVG----SQIKDIDISNDSFKPIEAI 374
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I++MTP+ER KP+++ S R+KR+A SG QQV+ L+ Q QMR MK + + G
Sbjct: 375 IKSMTPKERSKPDIIDGS--RKKRIAAGSGTDIQQVNNLLKQFDQMRSMMKKVNQMQASG 432
Query: 238 SLPAL 242
+ A
Sbjct: 433 KMKAF 437
>gi|409997447|ref|YP_006751848.1| signal recognition particle protein [Lactobacillus casei W56]
gi|406358459|emb|CCK22729.1| Signal recognition particle protein [Lactobacillus casei W56]
Length = 479
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 203 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 263 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 323 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 382
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 383 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 440
Query: 232 GVMEGG 237
G+M GG
Sbjct: 441 GLMGGG 446
>gi|418002277|ref|ZP_12642398.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
gi|410544439|gb|EKQ18765.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
Length = 478
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|312130725|ref|YP_003998065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Leadbetterella byssophila DSM 17132]
gi|311907271|gb|ADQ17712.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Leadbetterella byssophila DSM 17132]
Length = 438
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 165/237 (69%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++++K+ ++P+E+L VVD+MTGQ+A FN + G +LTKLDGDSRGGAAL
Sbjct: 199 MMTEVENIKKAISPSEILFVVDSMTGQDAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KP+K + GE+MEDL+ F+PDRMA RILGMGDV+S VE+AQ+ +++A ++
Sbjct: 259 SIRAVVDKPVKFMSTGEKMEDLDIFHPDRMASRILGMGDVISLVERAQQAFDEDEARKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ NFD NDFL Q + +MG++ V+GMIPGMG V + S K +E++I++
Sbjct: 319 KKMRENNFDLNDFLGQLEQIKKMGNLKDVMGMIPGMGAAIK-DVDISNDSFKPIESIIKS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MTP+ER +P+++ S RRKR+A +G++ Q+V+ L+ Q QM+ MK + GG
Sbjct: 378 MTPKERSQPDIIDGS--RRKRIATGAGRSIQEVNNLLKQFEQMKKMMKKFNAMTPGG 432
>gi|329929595|ref|ZP_08283302.1| signal recognition particle protein [Paenibacillus sp. HGF5]
gi|328936240|gb|EGG32692.1| signal recognition particle protein [Paenibacillus sp. HGF5]
Length = 460
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 177/249 (71%), Gaps = 5/249 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGG 237
+MT E+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG
Sbjct: 381 SMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGG 438
Query: 238 SLPALSNLE 246
AL L+
Sbjct: 439 KNKALKQLK 447
>gi|408356888|ref|YP_006845419.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
gi|407727659|dbj|BAM47657.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
Length = 450
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 170/234 (72%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K+ L+P E+ LVVD+MTGQ+A + FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELYQIKQNLSPDEIFLVVDSMTGQDAVNVAENFNEQLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ KPIK +G GE+++ LE F+PDRMA RILGMGDVLS +EKA+ + ++ A+E++
Sbjct: 262 SIKSVTNKPIKFIGMGEKLDQLEDFHPDRMASRILGMGDVLSLIEKAEATIDEKKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
K+ SA+FDF+DFL+Q V MG + ++ ++PG K+ + V+ +K L +EA+I+
Sbjct: 322 DKMRSASFDFDDFLEQMEQVRSMGPLDELLSLLPGANKMKGLKNVQLDDKQLVHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT +ER+ P L+ +P R+KR+AQ SG+ +V++L+ Q +MR MK + G+
Sbjct: 382 SMTKQERKDPSLM--NPSRKKRIAQGSGRPIAEVNRLIKQFNEMRKMMKQMSGM 433
>gi|261408023|ref|YP_003244264.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
gi|261284486|gb|ACX66457.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
Length = 460
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 177/249 (71%), Gaps = 5/249 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGG 237
+MT E+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG
Sbjct: 381 SMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGG 438
Query: 238 SLPALSNLE 246
AL L+
Sbjct: 439 KNKALKQLK 447
>gi|299536774|ref|ZP_07050082.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|424737018|ref|ZP_18165474.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
gi|298727786|gb|EFI68353.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|422948850|gb|EKU43226.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
Length = 452
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 168/237 (70%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRSLKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E++
Sbjct: 262 SIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K S F F+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I
Sbjct: 322 EKFKSQTFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP E+ PE++ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G
Sbjct: 382 SMTPAEKTNPEIINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASG 436
>gi|169827098|ref|YP_001697256.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
gi|168991586|gb|ACA39126.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
Length = 452
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 169/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E++
Sbjct: 262 SIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K + +F F+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I
Sbjct: 322 EKFKTQSFTFDDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP E+ PEL+ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G
Sbjct: 382 SMTPAEKTNPELINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASG 436
>gi|435853372|ref|YP_007314691.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
gi|433669783|gb|AGB40598.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
Length = 447
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 165/247 (66%), Gaps = 5/247 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + F+ +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKQIKSEVIPHEILLVVDAMTGQDAVNVAEEFDDALGVDGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ V+GKPIK VG GE++++LEPF+PDRM+ RILGMGDVLS +EKA+E M +E A+E++
Sbjct: 261 SISSVTGKPIKFVGTGEKLDNLEPFHPDRMSSRILGMGDVLSLIEKAEEQMDEERAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F DFL Q V MG + ++GMIPG GK + EK L +EA+I +
Sbjct: 321 QKLREKKFTLEDFLDQLEQVRNMGPLDEILGMIPGAGK-QLKNLNMDEKQLDYIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--GS 238
MT EER PE++ S RR+R+A SG + QQV++L+ Q Q + M L +G G
Sbjct: 380 MTIEERRNPEIINGS--RRRRIAAGSGTSVQQVNRLLKQFKQTKKMMDQLGDAQKGMAGK 437
Query: 239 LPALSNL 245
L NL
Sbjct: 438 LKGKMNL 444
>gi|410667373|ref|YP_006919744.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
gi|409105120|gb|AFV11245.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
Length = 451
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 5/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K + P EV+LVVDAMTGQ+A + F E+G+TG ILTKLDGD+RGGAAL
Sbjct: 201 LMAELRSMKEAVEPQEVILVVDAMTGQDAVNVARAFQEELGLTGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE+++ L+PFYPDRMA RILGMGDVLS +E+AQ QE A E++
Sbjct: 261 SVKSVTGCPIKFVGTGEKLDTLQPFYPDRMAARILGMGDVLSLIERAQSTFDQEKAREIE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAM 177
KK+ F DFL+Q V MGS+ +++GM+PG+G ++ Q + K +EAM
Sbjct: 321 KKLRRQEFTLEDFLEQIERVRSMGSLEQLLGMLPGVGGAKELRKLQAQFDGKEFVRLEAM 380
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
I +MTPEER P ++ S RRKR+A+ SG + Q V++L+ Q R K L V G
Sbjct: 381 INSMTPEERRNPAIINGS--RRKRIARGSGTSVQDVNRLLKHFEQTRKLFKQLSEVGSG 437
>gi|365904203|ref|ZP_09441962.1| signal recognition particle protein [Lactobacillus versmoldensis
KCTC 3814]
Length = 479
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 170/239 (71%), Gaps = 6/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKRIKELAQPNEILFVADSMTGQVAAKVAAGFDEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ+ Q+ A++M
Sbjct: 262 SIRSVTGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQQDYDQKQAQDMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI +FDFNDF+ Q + +MG + ++ MIPGM P A V EK + ++A++
Sbjct: 322 QKIKENSFDFNDFIDQMDQIQKMGPLDEIMKMIPGMAN-NPALANVNIDEKDISHLKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVMEG 236
+MTP+ERE P+LL +P RR+R+A SG++ Q+V++++ Q Q + MK + G M+G
Sbjct: 381 YSMTPQEREDPKLL--NPSRRRRIASGSGRSVQEVNRMIKQFKQSQDMMKQMSKGNMKG 437
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 167/249 (67%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + +I M+PGM PA + K + A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLM 231
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M
Sbjct: 381 LSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGM 438
Query: 232 GVMEGGSLP 240
M GG +P
Sbjct: 439 QNMFGGQMP 447
>gi|392989044|ref|YP_006487637.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
gi|392336464|gb|AFM70746.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
Length = 472
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ +FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+
Sbjct: 322 KKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|340352886|ref|ZP_08675720.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
gi|339612202|gb|EGQ17015.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
Length = 450
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE++ +K+ +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIESLKKHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMDALDVFHPARMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +
Sbjct: 379 MTPKERTNPEILNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMG 436
Query: 241 ALSNL 245
+ N+
Sbjct: 437 KMKNM 441
>gi|365118236|ref|ZP_09336957.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
gi|363649905|gb|EHL88998.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
Length = 440
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 163/240 (67%), Gaps = 3/240 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+K +K +NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 MMREIKAIKDAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKMDALDVFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFISQIQQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSVEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PELL S RR+R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPKERSNPELLNGS--RRQRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVAGGKMGKMMP 436
>gi|199597126|ref|ZP_03210558.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|258508639|ref|YP_003171390.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|385828300|ref|YP_005866072.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|199591930|gb|EDZ00005.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|257148566|emb|CAR87539.1| Signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|259649945|dbj|BAI42107.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
Length = 478
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 170/246 (69%), Gaps = 7/246 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMTELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P+ L +P RR+R+A SG+ +V++++ Q Q K +M M G++
Sbjct: 382 SMTPKEREDPDSL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNM 435
Query: 240 PALSNL 245
L L
Sbjct: 436 KGLDGL 441
>gi|254974797|ref|ZP_05271269.1| signal recognition particle protein [Clostridium difficile
QCD-66c26]
gi|255092185|ref|ZP_05321663.1| signal recognition particle protein [Clostridium difficile CIP
107932]
gi|260682859|ref|YP_003214144.1| signal recognition particle protein [Clostridium difficile CD196]
gi|260209022|emb|CBA62118.1| signal recognition particle protein [Clostridium difficile CD196]
Length = 452
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 170/254 (66%), Gaps = 11/254 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-- 236
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G +
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMK 438
Query: 237 -----GSLPALSNL 245
G LP L+ +
Sbjct: 439 KRGGLGGLPFLNKI 452
>gi|377831263|ref|ZP_09814244.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
gi|377554941|gb|EHT16639.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
Length = 483
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 164/239 (68%), Gaps = 5/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELVNIKNLTQPNEILLVVDAMTGQNAVKTAQGFNDKLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEKAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ + FD+NDFL+Q V +MG + ++ M+PGM PA + K ++A+I
Sbjct: 322 DKMRANEFDYNDFLEQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEERE P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + GG
Sbjct: 381 LSMTPEERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMKQVTNGNFGG 437
>gi|402836125|ref|ZP_10884675.1| signal recognition particle protein [Mogibacterium sp. CM50]
gi|402272137|gb|EJU21360.1| signal recognition particle protein [Mogibacterium sp. CM50]
Length = 447
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K+ + P E+LL VDA+TGQ+A + FN +GI G I+TK+DGDSRGGAAL
Sbjct: 201 LMDELVQLKKGIRPHEILLAVDALTGQDAVNIAAGFNETLGIDGIIMTKMDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S K V+GKPIK +G GE+ LEPF+PDR+A RILGMGDV+S +E+A+ +E+A M+
Sbjct: 261 STKMVTGKPIKFMGTGEKYNALEPFHPDRIASRILGMGDVMSLIEQAENAYSEEEAARME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV--REAEKSLKIMEAMI 178
+K FD NDFL Q + RMG ++++I MIPG+ Q+ + +K L M+A+I
Sbjct: 321 EKFRKNQFDLNDFLNQMGQINRMGGIAKLIDMIPGISAADKKQIDFEKGKKDLDRMKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
++MT EERE P +L S RRKR+A SG+T Q ++QL+ Q QM+ +K
Sbjct: 381 QSMTNEERENPNILNAS--RRKRIAAGSGQTVQSINQLIKQFDQMKAMIKQF 430
>gi|424841015|ref|ZP_18265640.1| signal recognition particle protein [Saprospira grandis DSM 2844]
gi|395319213|gb|EJF52134.1| signal recognition particle protein [Saprospira grandis DSM 2844]
Length = 447
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 162/245 (66%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ VK + PTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAAL
Sbjct: 201 MMTEIAAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDRINYDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K GKPIK + GE+M+ L+ F+PDRMA RILGMGD++S VEKAQE +++A+ ++
Sbjct: 261 SIKYTVGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGDIISLVEKAQEDFDEKEAKRLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ +IGMIPGMGKI + + + +EA+I +
Sbjct: 321 KKIRKNEFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKIAK-DIDIDDNAFNKIEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEERE P ++ S R+KR+A+ SG ++++Q + Q QMR M + + GG
Sbjct: 380 MTPEERENPGVINGS--RKKRIAKGSGNRVEEINQFLRQFEQMRKMMFQMSKMQAGGGNM 437
Query: 241 ALSNL 245
+ N+
Sbjct: 438 RMPNI 442
>gi|303237098|ref|ZP_07323668.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
gi|302482485|gb|EFL45510.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
Length = 447
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 166/245 (67%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME L+ F+P+RMA RILGMGDV+S VE+AQE +E+A+++Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEALDVFHPNRMADRILGMGDVVSLVERAQEQFDEEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S R++R+A+ SG Q+V++LV Q Q R MK + G G +
Sbjct: 379 MTPKERTNPEVLNNS--RKQRIAKGSGTNIQEVNRLVKQFDQTRKMMKMVTGSKMAGMMG 436
Query: 241 ALSNL 245
+ N+
Sbjct: 437 KMKNM 441
>gi|436840520|ref|YP_007324898.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169426|emb|CCO22794.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 508
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 160/225 (71%), Gaps = 4/225 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K P E+L V DAMTGQ+A + +TF+ ++GITG +LTK+DGD+RGGAAL
Sbjct: 200 LMDELVSIKAACAPDEILFVADAMTGQDAVNVASTFDEKLGITGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GK +K VG GE++ +LE FYPDR A RILGMGDVLS +EKAQ VM + +AE++
Sbjct: 260 SIKSVTGKAVKFVGMGEKLSELELFYPDRAASRILGMGDVLSLIEKAQSVMGEGEAEKLT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
K A FD DF Q R + ++GSMS ++ MIPG+GK+T + +K L +EA+I
Sbjct: 320 DKFRKAQFDLEDFRTQMRRMKKIGSMSSIMKMIPGLGKLTKQLGDIEVPDKELNRIEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 223
+MT EER+KP+L+ +P RR+R+A+ SG Q+V+Q++ QM
Sbjct: 380 SSMTMEERKKPKLI--NPSRRQRIAKGSGVEVQEVNQMLKNFEQM 422
>gi|431799152|ref|YP_007226056.1| signal recognition particle protein [Echinicola vietnamensis DSM
17526]
gi|430789917|gb|AGA80046.1| signal recognition particle protein [Echinicola vietnamensis DSM
17526]
Length = 446
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 167/245 (68%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ D+K L+P E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMNEISDLKENLDPAETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+L+ FYPDRMA RILGMGDV+S VEKAQ+ +++A+ +
Sbjct: 259 SIRHVVDKPIKFISTGEKMENLDVFYPDRMAQRILGMGDVVSLVEKAQQSFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK+ + + S K +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQIEQIKKMGNLKDLMGMIPGMGKMIKG-LDIDDDSFKPIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP ERE P+++ S RRKR+A SG++ Q+V+ L+ Q MR MK + + GG+
Sbjct: 378 MTPLERENPDVIDGS--RRKRIADGSGRSIQEVNNLMKQFRDMRKMMKQMNKM--GGAQR 433
Query: 241 ALSNL 245
AL NL
Sbjct: 434 ALGNL 438
>gi|365157114|ref|ZP_09353395.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
gi|363625848|gb|EHL76859.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
Length = 446
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 167/231 (72%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELKQIQSLTKPEEIFLVVDAMTGQDAVNVAQSFDEQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK G GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A++++
Sbjct: 262 SIRSVTGKPIKFAGMGEKMDALEPFHPERMASRILGMGDVLTLIEKAQASVDEEKAKQLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI + +F +DFL Q V MG + ++ MIPGM +I ++ EK + +EA+I
Sbjct: 322 QKIRTMSFTLDDFLDQLGQVRSMGPLDELLKMIPGMNRIKGLNNIQIDEKQISHVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE+E PE++ S RRKR+A+ SG T Q+V++L+ Q +M+ MK +
Sbjct: 382 SMTKEEKEHPEIINSS--RRKRIAKGSGTTIQEVNRLLKQFEEMKKMMKQM 430
>gi|366162322|ref|ZP_09462077.1| signal recognition particle protein [Acetivibrio cellulolyticus
CD2]
Length = 450
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 158/219 (72%), Gaps = 4/219 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + P E+LLVVD+MTGQ+A + TFN ++G+ G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKDTVRPHEILLVVDSMTGQDAVNVSETFNEKLGVDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK +G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A EM+
Sbjct: 261 SVKTVTGKPIKFIGMGEKLSDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKAALEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMI 178
+K+ + F DFL Q + + +MG +++++GM+PG+ ++ A +K L EA+I
Sbjct: 321 RKMRTQQFTLEDFLDQMQQIKKMGPLNKIVGMLPGVNADALKEINSADSDKELGRFEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P ++ S RRKR+A SG T Q V++++
Sbjct: 381 RSMTKKERNDPSIINGS--RRKRIAAGSGTTVQDVNKVL 417
>gi|375011584|ref|YP_004988572.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
gi|359347508|gb|AEV31927.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
Length = 449
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 156/223 (69%), Gaps = 3/223 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++DV + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMTEIRDVHAAIKPDETLFVVDSMTGQDAVNTAKAFNDVLDYEGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+++ V KPIK +G GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQE +++A +Q
Sbjct: 260 TIRTVVEKPIKFIGTGEKMDALDVFYPERMADRILGMGDVVSLVERAQEQFDEDEARRVQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI S FDFNDFL Q + + +MG++ ++GMIPGMGK+ + + + K +EA+I +
Sbjct: 320 KKIASNKFDFNDFLGQIKQIKKMGNVKDLMGMIPGMGKMMK-NIDIDDDAFKGVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 223
MTP ERE P+L+ S RR+R+A+ SGKT Q V+QL+ Q M
Sbjct: 379 MTPAEREDPKLINGS--RRQRIAKGSGKTIQDVNQLLKQFADM 419
>gi|407474079|ref|YP_006788479.1| signal recognition particle protein Ffh [Clostridium acidurici 9a]
gi|407050587|gb|AFS78632.1| signal recognition particle protein Ffh [Clostridium acidurici 9a]
Length = 447
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 159/230 (69%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K +NP E+LLVVD+MTGQ+A + TFN + ITG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELQNIKAEVNPNEILLVVDSMTGQDAVTVAETFNETLDITGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++DLE F+PDRMA RILGMGDVLS +EKAQ E A E++
Sbjct: 261 SIRAVTEKPIKFIGMGEKLDDLETFHPDRMASRILGMGDVLSLIEKAQANFDTEKALELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ + F F DFL Q + V +G M+ ++GM+PG+ + EK K +EA+I++
Sbjct: 321 KKLRNQEFTFEDFLDQLQQVKNLGPMNELLGMLPGVNSKQLKGLNVDEKDFKRLEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P ++ S RRKR+AQ SG Q V++L+ Q + R +K
Sbjct: 381 MTKEERINPTVIDGS--RRKRIAQGSGTNIQDVNKLLKQFKETRKMIKKF 428
>gi|255529983|ref|YP_003090355.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
gi|255342967|gb|ACU02293.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
Length = 446
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ VK P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 199 MMDEIAAVKESTKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+Q
Sbjct: 259 SIKSVVNKPIKFIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I++
Sbjct: 319 KKIRKNKFDFNDFYNQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIEDDAFKNVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ERE P+ + +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 378 MTKYERENPDSIQQS--RRLRIAKGSGNKIEEVTKLIKQFEDMRKVMKQF 425
>gi|375088729|ref|ZP_09735067.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
gi|374561694|gb|EHR33033.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
Length = 512
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 166/241 (68%), Gaps = 9/241 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +NP E+ LVVDAMTGQ+A + TFN ++ I+ ILTKLDGD+RGGAAL
Sbjct: 204 LMTELSDIKSEVNPHEIFLVVDAMTGQDAVNVSDTFNKQLDISSVILTKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ +V+ KPIK G GE+++ LEPFYP+RMA RILGMGD+L+ VE+AQ+ M + AEE+
Sbjct: 264 SISKVTNKPIKFTGTGEKLDALEPFYPERMANRILGMGDILTLVERAQQEMDDKRAEELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ +DFNDF++Q + MG + +I MIPGM + P Q EK L M+A++
Sbjct: 324 QKMAEQTYDFNDFIEQMDQMRNMGPLEDLIKMIPGMSNL-PGMDQFEVDEKDLDRMKAIV 382
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEER+ P++L+++ RRKR+A +G+T V++L+ Q Q K LMG M G
Sbjct: 383 LSMTPEERKNPDILSQN--RRKRIADGAGRTLLDVNKLITQFKQ----SKELMGDMSSGK 436
Query: 239 L 239
+
Sbjct: 437 M 437
>gi|404370917|ref|ZP_10976232.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
gi|226912962|gb|EEH98163.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
Length = 450
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 167/235 (71%), Gaps = 9/235 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK +K +NP E+LLVVD+MTGQ+A + +FN + ++G ILTKLDGD+RGGAAL
Sbjct: 201 LMEELKSIKEEVNPQEILLVVDSMTGQDAVNVAESFNNSLDVSGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+M D E FYPDRM+ RILGMGDVLS +EKAQ+ ++A+E+
Sbjct: 261 SIRSVTEKPIKFIGVGEKMSDFEVFYPDRMSSRILGMGDVLSLIEKAQQAFDDKEAQELS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-----AEKSLKIME 175
K++ +F + D+L + ++GS+S+++ M+PG+ P +V++ EK L ++
Sbjct: 321 SKMLENDFTYEDYLTAMEQMKKLGSLSKIMEMVPGI----PKEVKDIDFDAGEKQLGRVK 376
Query: 176 AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
A+I +MTP+ER P+L+A S R+KR+A+ SG + Q+V++L+ MR +MK +
Sbjct: 377 AIIHSMTPKERRNPKLIAGSSSRKKRIAKGSGTSLQEVNKLIKGFDMMRKQMKQM 431
>gi|150390508|ref|YP_001320557.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
gi|149950370|gb|ABR48898.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
Length = 447
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELKD+K + P E+LLVVD+MTGQ+A + F+ ++G+ G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKDIKTTVKPQEILLVVDSMTGQDAVNVAEHFDTKLGVDGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+ KPIK VG GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E++
Sbjct: 261 SVRAVTRKPIKFVGLGEKLNDLEPFHPDRMASRILGMGDVLSLIEKAQVSFDEKKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI + F F DFL+Q + V MG +S+++ MIPG G + EK L ++A+I++
Sbjct: 321 NKIKTQQFTFEDFLEQLQQVQSMGPISQLLEMIPGAGGKQMKNLEVDEKELVHIQAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER+ P ++ S RRKR+A+ SG + QV++L+ Q Q + MK
Sbjct: 381 MTTGERKTPTIINGS--RRKRIAKGSGTSVAQVNRLIKQFDQTKKMMKQF 428
>gi|255313924|ref|ZP_05355507.1| signal recognition particle protein [Clostridium difficile
QCD-76w55]
gi|255516603|ref|ZP_05384279.1| signal recognition particle protein [Clostridium difficile
QCD-97b34]
gi|255649703|ref|ZP_05396605.1| signal recognition particle protein [Clostridium difficile
QCD-37x79]
gi|260686457|ref|YP_003217590.1| signal recognition particle protein [Clostridium difficile R20291]
gi|384360448|ref|YP_006198300.1| signal recognition particle protein [Clostridium difficile BI1]
gi|260212473|emb|CBE03380.1| signal recognition particle protein [Clostridium difficile R20291]
Length = 450
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 163/234 (69%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK +K + P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 LMAELKSIKSEVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E++
Sbjct: 261 SIRAVTQKPIKFMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI DF DFL+Q + MG + +++GMIPGMG + V K +K +A+I
Sbjct: 321 QKIKKQELDFEDFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT ER P +L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 381 QSMTTYERRNPGVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 167/249 (67%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + +I M+PGM PA + K + A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLM 231
+MTPEERE P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M
Sbjct: 381 LSMTPEERESPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGM 438
Query: 232 GVMEGGSLP 240
M GG +P
Sbjct: 439 QNMFGGQMP 447
>gi|410460649|ref|ZP_11314323.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
gi|409926703|gb|EKN63857.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
Length = 447
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 169/231 (73%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELAKPDEIFLVVDAMTGQDAVNVAESFNEQLGLTGTILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK VG GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + QE A+E++
Sbjct: 262 SIKAVTNIPIKFVGMGEKLDQLEDFHPERMASRILGMGDVLTLIEKAQANVDQEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F F+DFL+Q V +MG + +IGM+PG KI + ++ EK +K +EA+I+
Sbjct: 322 EKMRTMSFTFDDFLEQLAQVRKMGPLDDLIGMLPGANKIKGLKDLKVDEKQIKHVEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +E+ PE++ S R+KR+A+ SG+T Q+V++L+ Q M+ K +
Sbjct: 382 SMTKKEKVNPEIINAS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMFKQM 430
>gi|333897182|ref|YP_004471056.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112447|gb|AEF17384.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 446
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 159/230 (69%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKDAVNPDEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ KPIK + GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+Q
Sbjct: 261 SVKAVTRKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ F F+DFL Q + + MG + ++ MIPG+ V ++K +K +EA+I++
Sbjct: 321 KKILEQQFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNISDKDIKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|355677891|ref|ZP_09060658.1| signal recognition particle protein [Clostridium citroniae
WAL-17108]
gi|354812977|gb|EHE97591.1| signal recognition particle protein [Clostridium citroniae
WAL-17108]
Length = 458
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMEELVEIKDHVDVYQTILVVDAMTGQDAVNVSGTFNEKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A E+
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKATAEVDEEQARELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ A FD+NDFL Q + + +MG M ++ M+PGMG +++ + E EKS++ +E++I
Sbjct: 322 QKLRKAEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGSQLSGVDMDEGEKSMRRVESIIL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EER+ P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 382 SMTKEERDNPNLM--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|327404872|ref|YP_004345710.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
gi|327320380|gb|AEA44872.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
Length = 449
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ VK+ +NPTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIARVKKAINPTETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K + KPIK VG GE+M+ L+ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSIVDKPIKFVGTGEKMDALDVFYPKRMADRILGMGDVVSLVERAQEQFNEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+I FDFNDFL Q + + +MG++ ++GMIPGMGK V + + K +EA+I +
Sbjct: 320 KRIQKDQFDFNDFLGQIQQIKKMGNVKDLMGMIPGMGKAVK-DVDIQDDAFKHIEAIIFS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP+ER P L+ + R+ R+A SG Q+V++L+ Q + MK
Sbjct: 379 MTPKERANPSLM--NGTRKTRIANGSGTNIQEVNKLLKQFEDTKKMMK 424
>gi|374298883|ref|YP_005050522.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551819|gb|EGJ48863.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 508
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 169/234 (72%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K ++P E+L V DAMTGQ+A + +F+ ++ I+G +LTK+DGD+RGGAAL
Sbjct: 201 LMEELANIKAAVSPREILFVADAMTGQDAVNVAQSFDAKLEISGVVLTKMDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GK +K VG GE++ ++E F+PDR+A RILGMGDVL+ +EKAQ +++A+E+
Sbjct: 261 SIKSVTGKSVKFVGMGEKLSEMEVFHPDRIASRILGMGDVLTLIEKAQGEFSEDEAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK A+FDF DF Q R + ++GS+ ++ +IPGMGK+T ++ EK +K +EA+I
Sbjct: 321 KKFQKASFDFEDFRTQMRRLKKLGSLEGLLKLIPGMGKLTKQLGEMSVHEKEMKRVEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT EER KPE+L S RR+R+A SG + +QV+QLV QMR M+ +MG
Sbjct: 381 SSMTMEERRKPEVLNVS--RRRRIAAGSGTSLEQVNQLVKNFDQMRKMMQQVMG 432
>gi|227544363|ref|ZP_03974412.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|338202518|ref|YP_004648663.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
gi|227185626|gb|EEI65697.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|336447758|gb|AEI56373.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
Length = 481
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 167/249 (67%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + +I M+PGM PA + K + A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLM 231
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M
Sbjct: 381 LSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGM 438
Query: 232 GVMEGGSLP 240
M GG +P
Sbjct: 439 QNMFGGQMP 447
>gi|297617092|ref|YP_003702251.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144929|gb|ADI01686.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 156/224 (69%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELKD+K LNP E+LLVVDAMTGQ+A + ++FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 200 LMNELKDLKSSLNPHEILLVVDAMTGQDAVNVASSFNEQLGLTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE++EDLEPFYP+RMA RILGMGDV S VEKAQ + ++ A E+
Sbjct: 260 SVKAVAGCPIKFAGVGEKLEDLEPFYPNRMASRILGMGDVQSLVEKAQASIDEKKARELG 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEA 176
KKI F DFL Q + V MG + ++ MIPG G + + + EK + +EA
Sbjct: 320 KKIRQQEFTLEDFLDQIQQVRSMGPLEDLLAMIPGFGNLKQLKGFKTADIDEKEISRIEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I++MTPEER P +L S R+KR+A+ SG Q V++L+
Sbjct: 380 IIKSMTPEERLNPTMLNSS--RKKRIAKGSGTRVQDVNRLLKHF 421
>gi|335357213|ref|ZP_08549083.1| Signal recognition particle protein [Lactobacillus animalis KCTC
3501]
Length = 475
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELVNIKELAQPNEILLTVDAMTGQNAVEVAQGFNDQLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQKDFDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ +FDFNDFL Q V MG + ++ MIPGM PA ++ K ++ +A++
Sbjct: 322 DKMRENSFDFNDFLDQLEQVQNMGPIEDIMKMIPGMAN-NPALKNIKVDPKDMEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP+ERE P+LL +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPQEREDPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMSKGN 434
Query: 239 LPALSNL 245
+ L
Sbjct: 435 FSGMEGL 441
>gi|300728157|ref|ZP_07061528.1| signal recognition particle protein [Prevotella bryantii B14]
gi|299774583|gb|EFI71204.1| signal recognition particle protein [Prevotella bryantii B14]
Length = 449
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 168/253 (66%), Gaps = 17/253 (6%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISNLKNHVHPDETLFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++Q
Sbjct: 260 SIRTVVDKPIKFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
KKI FDFNDFL Q + +MG++ + MIPG+GK +R+ E + K +EA+
Sbjct: 320 KKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGK----AIRDVEIDDNAFKGIEAI 375
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------N 229
I++MTPEER PE+L S RRKR+A+ SG Q+V++L+ Q Q R MK +
Sbjct: 376 IKSMTPEERSHPEILNSS--RRKRIAKGSGTDIQEVNRLIKQFDQTRKMMKMVTGNKMAS 433
Query: 230 LMGVMEGGSLPAL 242
+M M+G ++P +
Sbjct: 434 MMARMKGMNIPGM 446
>gi|148544379|ref|YP_001271749.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|184153743|ref|YP_001842084.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227363196|ref|ZP_03847330.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|325682699|ref|ZP_08162215.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
gi|148531413|gb|ABQ83412.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|183225087|dbj|BAG25604.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227071802|gb|EEI10091.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|324977049|gb|EGC14000.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
Length = 481
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 167/249 (67%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + +I M+PGM PA + K + A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLM 231
+MTPEERE P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M
Sbjct: 381 LSMTPEERENPDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGM 438
Query: 232 GVMEGGSLP 240
M GG +P
Sbjct: 439 QNMFGGQMP 447
>gi|255524258|ref|ZP_05391217.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296185380|ref|ZP_06853790.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|255512083|gb|EET88364.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296050214|gb|EFG89638.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
Length = 454
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELKDVK + P E+LLVVDAMTGQ+A + +FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMNELKDVKENVKPDEILLVVDAMTGQDAVNVANSFNDQLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++ KPIK VG GE+M D E F+PDRMA RILGMGDVLS +EKA++ + +E+A+++
Sbjct: 261 SIKAMTDKPIKFVGLGEKMSDFEVFHPDRMASRILGMGDVLSLIEKAKQSIDEEEAKKIG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
++MS F+ DFL + + +MG M++++ M+PG+ ++ + +EK + +EA+I
Sbjct: 321 SRMMSQEFNLEDFLSSMKQIKKMGPMNKLLEMVPGLNTKELQGVDLSGSEKEMAKIEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER P L++ SP R+KR++Q SG T QQV++++
Sbjct: 381 SSMTVKERRNPSLVSGSPSRKKRISQGSGTTVQQVNKIL 419
>gi|313674513|ref|YP_004052509.1| signal recognition particle subunit ffh/srp54 (srp54) [Marivirga
tractuosa DSM 4126]
gi|312941211|gb|ADR20401.1| signal recognition particle subunit FFH/SRP54 (srp54) [Marivirga
tractuosa DSM 4126]
Length = 443
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 159/233 (68%), Gaps = 9/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K+ LNP+E L VVD+MTGQ+A TFN ++ G +LTKLDGD+RGGAAL
Sbjct: 199 MMKEISSLKKELNPSETLFVVDSMTGQDAVNTAKTFNEQLDFDGVVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME ++ FYPDRMA RILGMGDV+S VEKAQE QE+ +
Sbjct: 259 SIRTVVEKPIKFISSGEKMEAIDLFYPDRMAQRILGMGDVVSLVEKAQETFDQEETNRLS 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
KKI FDF DFL Q + + +MG++ ++GM+PGMGK Q+++ + + K +EA+
Sbjct: 319 KKIRKNQFDFEDFLSQLQQIKKMGNVKDLLGMLPGMGK----QIKDLDIDDDAFKPVEAI 374
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT EER PEL+ S R+KR+A+ SG + Q+++ L+ Q MR MK +
Sbjct: 375 IRSMTYEERSNPELMNAS--RKKRIAEGSGTSVQEINNLLKQFKDMRKMMKTM 425
>gi|147678059|ref|YP_001212274.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
gi|146274156|dbj|BAF59905.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
Length = 450
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/257 (47%), Positives = 167/257 (64%), Gaps = 14/257 (5%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K + P EVLLVVDAMTGQ A + TFN +G+ G ILTKLDGD+RGGAAL
Sbjct: 201 LMAELEAMKEAIRPHEVLLVVDAMTGQAAVGVAETFNSRLGLDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQE E MQ
Sbjct: 261 SVRAVTGKPIKFAGLGEKLDALEPFHPDRMAERILGMGDVLTLIEKAQENFNAEQMARMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KKI S F DFL+Q V ++G + +++ MIPG+G I + ++ EK L +EA+I
Sbjct: 321 KKIRSMEFTLEDFLEQLTQVKKLGPLEQILSMIPGLGGIKKLKDIQVDEKELVYVEAIIR 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTPEER PE + R++R+A+ SG + Q+V++L+ Q Q + MK +
Sbjct: 381 SMTPEERRDPERVLNGS-RKRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFV-------- 431
Query: 240 PALSNLEDALKSEQKAP 256
++E ALK K P
Sbjct: 432 ----DMEKALKKSGKMP 444
>gi|312143704|ref|YP_003995150.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
gi|311904355|gb|ADQ14796.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
Length = 445
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 163/233 (69%), Gaps = 7/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+ +K ++P E+LLVVDAMTGQ+A + F+ + I G +LTK+DGD+RGGAAL
Sbjct: 201 MMEELEGIKGAVDPDEILLVVDAMTGQDAVNVAQNFDKRLDIDGILLTKMDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KE++GKPIK G GE++ DLEPF+PDRMA RILGMGDVL +EKA++ + +E A+ ++
Sbjct: 261 SIKEITGKPIKFAGTGEKLADLEPFHPDRMASRILGMGDVLGLIEKAEKSIDKEKAKALE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAM 177
+KI F DF++Q V MG M ++GMIPGMG ++ QV +K L +EA+
Sbjct: 321 EKIRKNEFTLEDFMEQMSQVRNMGPMDELLGMIPGMGGAKQLKNLQVD--DKQLDHIEAI 378
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MTPEER KP+++ S RRKR+AQ SG Q V++L+ Q Q + MK L
Sbjct: 379 ISSMTPEERRKPDIINGS--RRKRIAQGSGTKIQDVNRLLKQFRQTKKMMKKL 429
>gi|227530556|ref|ZP_03960605.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
gi|227349562|gb|EEJ39853.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
Length = 484
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K+++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKQLVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+
Sbjct: 262 SIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKDFDEEQAQATM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FDFNDFL Q V +MG + +I M+PGM PA + K L + A+I
Sbjct: 322 DKMRENTFDFNDFLSQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQLDHIRAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G+
Sbjct: 381 YSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGN 434
Query: 239 LPALSNL 245
+ N+
Sbjct: 435 FNGMQNM 441
>gi|329962381|ref|ZP_08300385.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
gi|328530104|gb|EGF56989.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
Length = 440
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 161/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|331269654|ref|YP_004396146.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
gi|329126204|gb|AEB76149.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
Length = 451
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELENIKTSVEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+
Sbjct: 261 SIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K+++ F+ DF + + +MG ++++I M+PG+ ++ + EK L +EAMI
Sbjct: 321 DKMLNLEFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSNGEKELTKIEAMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER+ P +++ SP R++R+A SG QQV++L+
Sbjct: 381 DSMTLKERKDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|345859708|ref|ZP_08812042.1| signal recognition particle protein [Desulfosporosinus sp. OT]
gi|344327165|gb|EGW38609.1| signal recognition particle protein [Desulfosporosinus sp. OT]
Length = 451
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 162/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMTELRDIKNAVKPHEILLVVDAMTGQDAVNVAESFHKDLGLDGVILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G IK G GE+M+ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM+
Sbjct: 259 SIKAVTGCTIKFAGIGEKMDAIEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +
Sbjct: 319 QKLRKQEFTLEDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHLEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTPEER KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 378 MTPEERRKPSVIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|402494032|ref|ZP_10840779.1| signal recognition particle protein [Aquimarina agarilytica ZC1]
Length = 442
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + +NP+E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEISNIHKAVNPSETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VEKAQE +E+A ++Q
Sbjct: 260 SIKSVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVEKAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MG++ ++GMIPGMGK+ + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLSQIQQIKKMGNIKDLMGMIPGMGKMVKDV-DVDDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P+++ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 379 MTPAERANPQIINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|404482338|ref|ZP_11017565.1| signal recognition particle protein [Clostridiales bacterium
OBRC5-5]
gi|404344499|gb|EJZ70856.1| signal recognition particle protein [Clostridiales bacterium
OBRC5-5]
Length = 451
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 168/238 (70%), Gaps = 5/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMNELIEIKENVSVDDIILVVDAMTGQDAVNVAETFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI-MEAMIE 179
+KI A+FDFNDFL Q + +MG M+ V+ M+PG+G A + E + S I ++A+I+
Sbjct: 322 QKIAKADFDFNDFLDQLEQLEKMGGMASVLSMLPGIG--GKAALPEVDDSQMIKIKAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+M+ +ER P LL +P R+ R+A+ SG V++LV Q QM+ MK G+M+ G
Sbjct: 380 SMSEKERLDPSLL--NPSRKNRIAKGSGVNIADVNRLVKQFEQMKKMMKQFPGMMKNG 435
>gi|289423976|ref|ZP_06425768.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429728356|ref|ZP_19263082.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
gi|289155612|gb|EFD04285.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429149855|gb|EKX92817.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
Length = 452
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 173/253 (68%), Gaps = 11/253 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K V P E+LLVVDAMTGQ+A + +F+ +GI G +LTK+DGD+RGGAAL
Sbjct: 201 LMQELKDIKSVARPQEILLVVDAMTGQDAVNVAESFDTALGIDGVVLTKMDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+++++EPFYPDRMA RILGMGDVL+ +EKAQ + E A+E++
Sbjct: 261 SIRAVTKKPIKFVGMGEKLDNIEPFYPDRMASRILGMGDVLTLIEKAQSSLDMEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
K+ DF DFL Q + ++GS+ +++ MIPGMG + AQ+ + E K LK +A+
Sbjct: 321 AKMRKNEMDFEDFLNQLEQIQKIGSIDKIMDMIPGMGGM-KAQMGDMEKGKKELKKTKAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMG 232
I++MT +ER P +L S R+KR+A+ S T V++L+ Q +M+ MK N+MG
Sbjct: 380 IQSMTVKERRNPSILNAS--RKKRIARGSATTVADVNRLIKQFNEMKKMMKMFQSGNMMG 437
Query: 233 VMEGGSLPALSNL 245
M+ G P L L
Sbjct: 438 KMKKGGFPKLPKL 450
>gi|160892009|ref|ZP_02073012.1| hypothetical protein BACUNI_04468 [Bacteroides uniformis ATCC 8492]
gi|270296343|ref|ZP_06202543.1| signal recognition particle protein [Bacteroides sp. D20]
gi|317480461|ref|ZP_07939556.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|423303310|ref|ZP_17281309.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|423307968|ref|ZP_17285958.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
gi|156858487|gb|EDO51918.1| signal recognition particle protein [Bacteroides uniformis ATCC
8492]
gi|270273747|gb|EFA19609.1| signal recognition particle protein [Bacteroides sp. D20]
gi|316903376|gb|EFV25235.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|392688540|gb|EIY81825.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|392688953|gb|EIY82236.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
Length = 440
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 161/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|375085766|ref|ZP_09732389.1| signal recognition particle protein [Megamonas funiformis YIT
11815]
gi|374566366|gb|EHR37609.1| signal recognition particle protein [Megamonas funiformis YIT
11815]
Length = 455
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 154/224 (68%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK +K + P E+LLVVDAMTGQ+A + +FN ++G+ G ILTK+DGD+RGGAAL
Sbjct: 201 LMQELKSIKEDVKPHEILLVVDAMTGQDAVNVAESFNNDLGLDGVILTKMDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE++E LEPFYPDRMA RILGMGDVL+ +EKAQ E+A++M+
Sbjct: 261 SVKAVTGCPIKFVGAGEKLEALEPFYPDRMASRILGMGDVLTLIEKAQTAFDAEEAKKME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
K F +DFL Q V ++GS ++GMIPGMG K+ + K +K +EA
Sbjct: 321 KAFRKNEFTLDDFLSQLNQVRKLGSFENILGMIPGMGGLKKKLGDVDIDMNGKEIKHIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I AMTPEE+ +++ S RRKR+A SG Q+V++L+ Q
Sbjct: 381 IIRAMTPEEKRNTKIINGS--RRKRIAMGSGTKVQEVNKLLKQF 422
>gi|343083145|ref|YP_004772440.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
gi|342351679|gb|AEL24209.1| signal recognition particle protein [Cyclobacterium marinum DSM
745]
Length = 445
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 165/245 (67%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGDSRGGAA+
Sbjct: 199 MMDEISALKQSLNPSETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDSRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+L+ FYPDRMA RILGMGDV+S VEKAQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENLDLFYPDRMAQRILGMGDVVSLVEKAQQSFDEDEAKRLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI FDF+DFL Q + +MG++ ++GMIPGMGK + E + I EA+I +
Sbjct: 319 AKIRKNQFDFDDFLSQLDQIKKMGNIKDLLGMIPGMGKAIKGLDIDDESFIPI-EAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER P ++ S RR+R+A+ SG+T Q+V+ L+ Q MR MK + + GG+
Sbjct: 378 MTPDERGNPSIIDGS--RRRRIAKGSGRTIQEVNNLMKQFADMRKMMKQMNKM--GGAQK 433
Query: 241 ALSNL 245
AL L
Sbjct: 434 ALGAL 438
>gi|116495084|ref|YP_806818.1| Signal recognition particle GTPase [Lactobacillus casei ATCC 334]
gi|116105234|gb|ABJ70376.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus casei ATCC 334]
Length = 478
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 170/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLV DAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVDDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|209360587|gb|ACI42964.1| signal recognition particle protein [Lactobacillus casei]
Length = 478
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 170/246 (69%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ER P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQERGDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|294507645|ref|YP_003571703.1| signal recognition particle protein [Salinibacter ruber M8]
gi|294343973|emb|CBH24751.1| signal recognition particle protein [Salinibacter ruber M8]
Length = 461
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++D+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAAL
Sbjct: 204 MMQEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q
Sbjct: 264 SIRTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQ 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+KI S FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I+
Sbjct: 324 EKIRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTPEER P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G
Sbjct: 382 SMTPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQD 439
Query: 240 PALSNLEDAL 249
+S+L D +
Sbjct: 440 VDISSLMDKI 449
>gi|83814688|ref|YP_445750.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
gi|83756082|gb|ABC44195.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
Length = 461
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++D+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAAL
Sbjct: 204 MMQEVEDIKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q
Sbjct: 264 SIRTVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQ 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+KI S FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I+
Sbjct: 324 EKIRSEEFDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTPEER P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G
Sbjct: 382 SMTPEERAHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQD 439
Query: 240 PALSNLEDAL 249
+S+L D +
Sbjct: 440 VDISSLMDKI 449
>gi|409098690|ref|ZP_11218714.1| signal recognition particle protein [Pedobacter agri PB92]
Length = 446
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+E+ +VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 199 LMNEISEVKAKTQPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ +++A E+Q
Sbjct: 259 SIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQMQFDEKEAAELQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I +
Sbjct: 319 KKIRKNKFDFNDFYSQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIQDDAFKSIEAIINS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP E+E P+ + +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 378 MTPFEKENPDAIQQS--RRLRIAKGSGSKVEEVTKLIKQFEDMRKMMKQF 425
>gi|253681736|ref|ZP_04862533.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
gi|253561448|gb|EES90900.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
Length = 451
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELENIKTSVKPNEILLVVDSMTGQDAVNVSETFNDKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+
Sbjct: 261 SIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K+++ F+ DF + + +MG ++++I M+PG+ ++ + + EK L +EAMI
Sbjct: 321 DKMLNLEFNLEDFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSKGEKELTKIEAMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER P +++ SP R++R+A SG QQV++L+
Sbjct: 381 DSMTLKERRDPSVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|340622252|ref|YP_004740704.1| hypothetical protein Ccan_14810 [Capnocytophaga canimorsus Cc5]
gi|339902518|gb|AEK23597.1| Fifty-four-like protein [Capnocytophaga canimorsus Cc5]
Length = 446
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ ++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMDEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPERMADRILGMGDVISLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKHIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P L+ S R++R+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPSERSNPALIDAS--RKRRIAKGSGRDVQEVNQLLKQF 416
>gi|282859593|ref|ZP_06268697.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|424899550|ref|ZP_18323092.1| signal recognition particle protein [Prevotella bivia DSM 20514]
gi|282587644|gb|EFB92845.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|388591750|gb|EIM31989.1| signal recognition particle protein [Prevotella bivia DSM 20514]
Length = 453
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 167/247 (67%), Gaps = 3/247 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L + VR++R+A+ SG Q+V++LV Q Q R MK + G G +
Sbjct: 379 MTPKERTNPEIL--NNVRKQRIAKGSGTNLQEVNRLVKQFDQTRKMMKMVTGSKMAGMMS 436
Query: 241 ALSNLED 247
+ +L++
Sbjct: 437 KMKDLKN 443
>gi|442804649|ref|YP_007372798.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740499|gb|AGC68188.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 447
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 162/228 (71%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAAL
Sbjct: 201 LMHELENIKLSVKPHEILLVVDSMTGQDAVNVAESFNNRLDIDGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S K V+GKP+K VG GE++ D EPFYPDRMA RILGMGDVL+ +EKAQ ++ A E++
Sbjct: 261 STKAVTGKPVKFVGIGEKLSDFEPFYPDRMASRILGMGDVLTLIEKAQASFDEKKALELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ + F +DFL+Q + + MG +S+ +GM+PG+ ++ EK + +EA+I++
Sbjct: 321 KKLRTQQFTLDDFLEQLQQIKNMGPISQFLGMLPGVNSKVLKDIQIDEKQMVYVEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ERE P ++ S R++R+A+ SG + QQV+Q++ Q Q++ MK
Sbjct: 381 MTKKERENPSIINSS--RKRRIAEGSGTSIQQVNQVLKQFEQVKKMMK 426
>gi|429765776|ref|ZP_19298056.1| signal recognition particle protein [Clostridium celatum DSM 1785]
gi|429185629|gb|EKY26603.1| signal recognition particle protein [Clostridium celatum DSM 1785]
Length = 449
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 166/231 (71%), Gaps = 1/231 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDVK +NP+E+LLVVD+MTGQ+A + TFN + I+G ILTKLDGD+RGGAAL
Sbjct: 202 LMTELKDVKAEVNPSEILLVVDSMTGQDAVNVAETFNEALDISGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++ KP+K +G GE+M D E F+PDRM+ RILGMGDVLS +EKAQE + +++A+E+
Sbjct: 262 SIRHMTQKPVKFIGVGEKMNDFEVFHPDRMSSRILGMGDVLSLIEKAQEAIDEKEAKELG 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K+M +F ++D+L + ++GS+S+++ MIPG+ K + EK L + ++I
Sbjct: 322 QKMMENDFTYDDYLTAMDQMKKLGSISKLMEMIPGIPKELKDVDFDAGEKELAKVRSIIY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP+ER P+L+ S R+KR+A+ SG T Q V++L+ MR +MK +
Sbjct: 382 SMTPKERRNPKLIVGSSSRKKRIAKGSGTTLQDVNKLIKGHEVMRKQMKQM 432
>gi|335429766|ref|ZP_08556664.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
gi|334889776|gb|EGM28061.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
Length = 472
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 160/220 (72%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK + P E+LL VDAMTGQ+A + +F+ ++ +TGAILTKLDGD+RGGAAL
Sbjct: 202 LMDELQQVKEIAKPDEILLTVDAMTGQDAVTVADSFHKQLNVTGAILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+G PIK +G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ+ + +E+A +M
Sbjct: 262 SIRKVTGVPIKFMGLGEQLDKIEVFHPERMASRILGMGDVLTLIEKAQDAIDEEEAMDMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK A FD+NDF KQ + + R+G++ ++ MIPGMGK V +K +EA+I +
Sbjct: 322 KKFKEATFDYNDFKKQIKQIKRLGNLKGIMKMIPGMGK-QLNNVDIDDKQFNYIEAIINS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EER P L++ S RR+R+A+ +G+ +V++++ Q
Sbjct: 381 MTKEERRNPNLMSSS--RRRRIAEGAGRNISEVNRIIKQF 418
>gi|417989876|ref|ZP_12630374.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
gi|410537018|gb|EKQ11600.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
Length = 478
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 169/246 (68%), Gaps = 11/246 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKNIKELAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KA ++ A EM
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAXXNYDEKQAMEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+KI +FDFNDFL Q +++MG + ++ MIPGM A V+ K + M+A++
Sbjct: 322 EKIRENSFDFNDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNLM 231
+MTP+ERE P+LL +P RR+R+A SG+ +V++++ Q Q + MK L
Sbjct: 382 SMTPQEREDPDLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQSKQMMNQMSKGNMKGLD 439
Query: 232 GVMEGG 237
G+M GG
Sbjct: 440 GLMGGG 445
>gi|315648170|ref|ZP_07901271.1| signal recognition particle protein [Paenibacillus vortex V453]
gi|315276816|gb|EFU40159.1| signal recognition particle protein [Paenibacillus vortex V453]
Length = 460
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + V+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHSVVNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMGK+ + ++ EK + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMDQVKKLGPLDQLMDMIPGMGKMKQTKDLKVDEKQMGRIEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGG 237
+MT E+++P+++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG
Sbjct: 381 SMTTAEKQQPDIINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGG 438
Query: 238 SLPALSNLE 246
A+ L+
Sbjct: 439 KNKAMKQLK 447
>gi|365925209|ref|ZP_09447972.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420266516|ref|ZP_14768978.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394425212|gb|EJE98212.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 477
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAQIKTLAQPDEILLTVDAMTGQNAVEVAKGFNEQLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M DL+ FYPDRM+ RILGMGD+L+ +EKAQ+ ++ A++MQ
Sbjct: 262 SIRSVTGKPIKFIGQGEKMTDLDVFYPDRMSSRILGMGDMLTLIEKAQQDFDEKKAQQMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ +FDFNDF+ Q V +MG M +I MIPGM PA ++ K + ++A++
Sbjct: 322 EKMRENSFDFNDFIDQMEQVQKMGPMEDIIKMIPGMAN-NPAIKNLKVNPKDIDHLKAVV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EERE P+L +P RR+R+A SG+ +V++++ Q + MK +MG + G+
Sbjct: 381 YSMTNEERENPDLF--NPSRRRRIAAGSGRPIHEVNRMIKQFNE----MKKMMGKVSKGN 434
Query: 239 LPALSNL 245
+ +
Sbjct: 435 FEGMEGM 441
>gi|383764739|ref|YP_005443721.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381385007|dbj|BAM01824.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 463
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 167/238 (70%), Gaps = 10/238 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ V+ V P+++LLVVDAMTGQEA + FN + +TG I+TK+DGD+RGGAAL
Sbjct: 199 LMQELEQVRLVTRPSDILLVVDAMTGQEAVNVAEGFNARVPLTGLIMTKIDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++V+G PIK +G GE++ DLEPF P+R+AGRILGMGDVL+ +E+AQE + + A M+
Sbjct: 259 SVRQVTGVPIKFLGTGEKLPDLEPFDPERLAGRILGMGDVLTLIERAQENISADAAAAME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK----ITPAQVREAEKSLKIMEA 176
K+++ FDF DFL+Q + V R+G ++ ++ MIPG+ + I P A+ SLK EA
Sbjct: 319 KRLVEGQFDFEDFLEQLKQVKRLGPLTEILSMIPGLNRFAKEIDPTM---AQDSLKKTEA 375
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+I +MT +ER P++L S RR+R+A SG T Q V+ LV Q +M+ MK L GVM
Sbjct: 376 IINSMTIQERRNPDILNAS--RRRRIAAGSGTTVQDVNTLVKQFREMQKMMKQL-GVM 430
>gi|373471478|ref|ZP_09562516.1| signal recognition particle protein [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371759504|gb|EHO48233.1| signal recognition particle protein [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 451
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 169/236 (71%), Gaps = 5/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K +N +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMDELIEIKDNVNVDDIILVVDAMTGQDAVNVAETFNAKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI A+FDFNDFL Q + +MG M+ ++ M+PG+ GK QV +++ +KI +A+I+
Sbjct: 322 QKIAKADFDFNDFLDQLEQLEKMGGMASILSMLPGIGGKAALPQVDDSQ-MVKI-KAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
+M+ +ER P LL +P R+ R+A+ SG +V++LV Q Q + MK G+M+
Sbjct: 380 SMSEKERLDPSLL--NPSRKNRIAKGSGVNIGEVNRLVKQFEQTKKMMKQFPGMMK 433
>gi|260893271|ref|YP_003239368.1| signal recognition particle protein [Ammonifex degensii KC4]
gi|260865412|gb|ACX52518.1| signal recognition particle protein [Ammonifex degensii KC4]
Length = 445
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 164/234 (70%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P EVLLVVDAMTGQ+A + TF+ +G+ G +LTKLDGD+RGGAAL
Sbjct: 200 LMQELEEIKARVKPHEVLLVVDAMTGQDAVTVAETFHQRLGLDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + E A MQ
Sbjct: 260 SIRAVTGCPIKFVGVGEKLDMLEPFHPDRMADRILGMGDVLTLIEKAQSTIDAEQAAAMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K+++S +F+ DFL+ R +MG + ++ ++PG G K +++ EK L +EA+I
Sbjct: 320 KRLLSDDFNLEDFLEHLRQFRKMGPLEHILSLLPGFGGVKKLKEELQFDEKELIRVEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MTPEER PE++ S R++R+A+ SG T Q V++L+ Q Q + ++ MG
Sbjct: 380 NSMTPEERRHPEIIDGS--RKRRIARGSGTTVQDVNRLLKQFEQTKKLIRQFMG 431
>gi|157692277|ref|YP_001486739.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
gi|157681035|gb|ABV62179.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
Length = 446
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E++
Sbjct: 262 SIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|408789950|ref|ZP_11201587.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
gi|408520791|gb|EKK20821.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
Length = 479
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 164/241 (68%), Gaps = 9/241 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K ++PT+ LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKKIKAAVHPTDTLLVVDAMTGQNAVQTAEGFNDALDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G+GE++ DL+ F+PDRMA RILGMGDVLS VEK Q+ + ++ A ++
Sbjct: 262 SIKAVTGKPILYTGQGEKLADLDVFHPDRMASRILGMGDVLSLVEKTQQTIDEKKARQLN 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI +FDF+DF+ Q + RMGS+ +IGMIPGM PA V L ++A+I
Sbjct: 322 EKIKENSFDFDDFVDQLEQLQRMGSIKDLIGMIPGMAN-NPALKNVDMDPHELDKIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVM 234
+MT +ERE P+LL +P RR+R+A+ S + Q V++L+ Q +M+ M + MG M
Sbjct: 381 YSMTNQERENPDLL--NPSRRRRIARGSAQPIQTVNRLIKQFNEMKKMMNQVSNGNMGGM 438
Query: 235 E 235
E
Sbjct: 439 E 439
>gi|18310695|ref|NP_562629.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110800465|ref|YP_696400.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110802935|ref|YP_699000.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|168207936|ref|ZP_02633941.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|168210654|ref|ZP_02636279.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|168214190|ref|ZP_02639815.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|182625861|ref|ZP_02953627.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|422874634|ref|ZP_16921119.1| signal recognition particle protein [Clostridium perfringens F262]
gi|18145376|dbj|BAB81419.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110675112|gb|ABG84099.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110683436|gb|ABG86806.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|170660749|gb|EDT13432.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|170711297|gb|EDT23479.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|170714291|gb|EDT26473.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|177908895|gb|EDT71387.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|380304275|gb|EIA16564.1| signal recognition particle protein [Clostridium perfringens F262]
Length = 452
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAAL
Sbjct: 201 LMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++
Sbjct: 261 SIRDITGKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+++ F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I
Sbjct: 321 EKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 381 QSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|393788846|ref|ZP_10376971.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
gi|392653680|gb|EIY47334.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
Length = 440
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|338811281|ref|ZP_08623506.1| signal recognition particle protein [Acetonema longum DSM 6540]
gi|337276750|gb|EGO65162.1| signal recognition particle protein [Acetonema longum DSM 6540]
Length = 449
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 166/248 (66%), Gaps = 6/248 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K P E+LLVVDAMTGQ+A + FN ++G+ G ILTKLDGD+RGGAAL
Sbjct: 201 LMQELRLIKGQAKPHEILLVVDAMTGQDAVGVAEAFNGQLGLDGVILTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL +EKAQ + + A E++
Sbjct: 261 SIKAVTGCPIKFAGMGEKLDALEPFYPDRMASRILGMGDVLGLIEKAQASLDLDKARELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
KK+ +F F+DFL+Q + V ++GSM +++ MIPGMG Q++ A EK LK EA+
Sbjct: 321 KKLRKDSFTFDDFLEQLQQVRKLGSMEQILSMIPGMGS-QLKQLKNAELDEKDLKRTEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I +MT +ER+ P L+ S RRKR+A SG Q V++L+ Q + R MK + + G
Sbjct: 380 IRSMTKKERQDPALINGS--RRKRIASGSGTKVQDVNRLLKQFEETRKMMKRFQLMQKSG 437
Query: 238 SLPALSNL 245
P NL
Sbjct: 438 RKPKGFNL 445
>gi|168188032|ref|ZP_02622667.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
gi|169294122|gb|EDS76255.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
Length = 451
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 160/219 (73%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K + P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMEELENIKISVEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPIK VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+
Sbjct: 261 SIKAVTGKPIKYVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K+++ F+ DF + +MG ++++I M+PG+ ++ + EK +K +EAMI
Sbjct: 321 DKMLNLEFNLEDFKDSMAQMKKMGPLTKIIEMMPGVNSKQLQGLDLSRGEKEIKKIEAMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER P L+A SP R++R+A SG QQV++L+
Sbjct: 381 DSMTLKERRDPSLVAGSPSRKRRIANGSGSNVQQVNKLL 419
>gi|169342711|ref|ZP_02863752.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
gi|169299217|gb|EDS81287.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
Length = 452
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAAL
Sbjct: 201 LMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++GKPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++
Sbjct: 261 SIRDITGKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+++ F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I
Sbjct: 321 EKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 381 QSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|219669778|ref|YP_002460213.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
gi|219540038|gb|ACL21777.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
Length = 453
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMGELREIKTAVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM+
Sbjct: 259 SVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 378 MTAEERRKPALIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|417002717|ref|ZP_11942021.1| signal recognition particle protein [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479005|gb|EGC82106.1| signal recognition particle protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 445
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 163/223 (73%), Gaps = 2/223 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQEA + TF+ + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKEAVNPDEILLVVDAMTGQEAVNVAKTFDEYLDITGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE++EDLEPF+PDRMA RILGMGDVLS +EKA++ + E+A+E++
Sbjct: 260 SIRQVVGKPIKFIGVGEKLEDLEPFHPDRMANRILGMGDVLSLIEKAEKELSIENAKEIE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + +DF++Q + + MG + ++ MIPG+ V + +EA+I +
Sbjct: 320 RKMREQTYTLDDFMEQVQQIRNMGPLEDLLAMIPGVNSKMLKGVNVDDTGFVRIEALINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 223
MT EEREKPE++ +S R++R+A+ SG +++++L+ Q ++
Sbjct: 380 MTKEEREKPEIIGKS--RKERIAKGSGVDVKELNKLLKQFKEL 420
>gi|374582903|ref|ZP_09655997.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
gi|374418985|gb|EHQ91420.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
Length = 453
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG AL
Sbjct: 199 LMGELRDIKSAVKPHEILLVVDAMTGQDAVNVAESFHNELGLDGVILTKLDGDTRGGGAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G IK VG GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM+
Sbjct: 259 SIKAVTGCTIKFVGIGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + +MG +S ++ MIPG+GK ++ EK +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMEQMKKMGPLSSILEMIPGVGK-QAKDIKIDEKDTAHVEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 378 MTTEERRKPVIIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|336113783|ref|YP_004568550.1| signal recognition particle protein [Bacillus coagulans 2-6]
gi|335367213|gb|AEH53164.1| signal recognition particle protein [Bacillus coagulans 2-6]
Length = 447
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 172/238 (72%), Gaps = 3/238 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMNELKEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++
Sbjct: 262 SIRAVTEKPIKFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ +F F DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I+
Sbjct: 322 KKMRDQSFTFEDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MT +E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 382 SMTKQEKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|331001995|ref|ZP_08325515.1| signal recognition particle protein [Lachnospiraceae oral taxon 107
str. F0167]
gi|330411791|gb|EGG91196.1| signal recognition particle protein [Lachnospiraceae oral taxon 107
str. F0167]
Length = 451
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 168/235 (71%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K +N +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMNELLEIKDNVNVDDIILVVDAMTGQDAVNVAETFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI A+FDFNDFL+Q + +MG M+ ++ M+PG+G + ++ +KI +A+I++
Sbjct: 322 QKIAKADFDFNDFLEQLEQLEKMGGMASILSMLPGIGGKAALPEVDDKQMVKI-KAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
M+ +ER P LL +P R+ R+A+ SG +V++LV Q QM+ MK G+M+
Sbjct: 381 MSEKERLDPSLL--NPSRKSRIAKGSGVNIAEVNRLVKQFEQMKKMMKQFPGMMK 433
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 158/217 (72%), Gaps = 2/217 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K + P E+LLVVD+MTGQ+A + +FN ++G+ G ILTKLDGD+RGGAAL
Sbjct: 201 LMEELQNIKEAVRPQEILLVVDSMTGQDAVNVAESFNEKLGVDGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK +G GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++
Sbjct: 261 SVKAVTGKPIKFIGMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ + F DFL+Q + + +MG +++++ MIPG + EK + +EA+I++
Sbjct: 321 KKMRTQQFTLEDFLEQMQQIKKMGPLNQLLAMIPGFNANVMKDIELDEKKMARVEAIIKS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MT EER P ++ S RRKR+A SG T Q+V++L+
Sbjct: 381 MTKEERNNPSIINGS--RRKRIAAGSGTTVQEVNKLL 415
>gi|450002251|ref|ZP_21825979.1| signal recognition particle protein [Streptococcus mutans N29]
gi|449183368|gb|EMB85352.1| signal recognition particle protein [Streptococcus mutans N29]
Length = 516
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 163/239 (68%), Gaps = 8/239 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM GG
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSGG 434
>gi|258511333|ref|YP_003184767.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478059|gb|ACV58378.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 479
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 165/233 (70%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K++L P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 199 LMAELESMKKILEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+V+ +G PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+
Sbjct: 259 TVRAATGCPIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIE 179
++ SANF +DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I
Sbjct: 319 ARMRSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIIS 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MTPEER P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 379 SMTPEERRDPSILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
Length = 504
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ + + P E+LLV DAMTGQEA + F+ + +TG +LTK+DGD+RGGAAL
Sbjct: 200 MMQEVERIAEAVKPHEILLVADAMTGQEAVNVAQEFHRRLALTGLVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V G PIK +G GER++ +EPFYPDR+A RILGMGDVL+ +E+AQ + +E++ ++
Sbjct: 260 SIRSVVGVPIKYIGTGERIDAVEPFYPDRLASRILGMGDVLTLIERAQAEITEEESRALE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K+++ F+F DFL Q + + RMG +++++ MIPG+G+ + QV+ ++ K +EAMI
Sbjct: 320 EKVLAGQFNFEDFLNQLQQIKRMGPLTQLLEMIPGIGQALRQQQVQISDDEFKHIEAMIF 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER P++L P RRKR+A SG + QV+QLV Q QM+ M
Sbjct: 380 SMTPEERRNPDIL--KPSRRKRIAAGSGTSVAQVNQLVNQFKQMQKMMAQF 428
>gi|315651824|ref|ZP_07904828.1| signal recognition particle protein [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315485954|gb|EFU76332.1| signal recognition particle protein [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 451
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 170/236 (72%), Gaps = 5/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K +N +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMNELIEIKDNVNVDDIILVVDAMTGQDAVNVAETFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI A+FDFNDFL+Q + +MG M+ ++ M+PG+ GK QV + + +KI +A+I+
Sbjct: 322 QKIAKADFDFNDFLEQLEQLEKMGGMTSILSMLPGIGGKSALPQVDDGQ-VVKI-KAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
+M+ +ER P LL +P R+ R+A+ SG +V++LV Q QM+ MK G+M+
Sbjct: 380 SMSKKERLDPSLL--NPSRKNRIAKGSGVNIGEVNRLVKQFEQMKKMMKQFPGMMK 433
>gi|385799827|ref|YP_005836231.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
gi|309389191|gb|ADO77071.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
Length = 446
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 164/233 (70%), Gaps = 7/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+ +K ++P E+LLVVDAMTGQ+A + F+ + + G +LTK+DGD+RGGAAL
Sbjct: 201 MMEELESIKAAVDPDEILLVVDAMTGQDAVNVAKNFDQRLDVDGIVLTKMDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK G GE++ DLE F+PDRM+ RILGMGDVLS +EKA++ + QE A++++
Sbjct: 261 SIKAITGKPIKFAGTGEKLADLETFHPDRMSSRILGMGDVLSLIEKAEQSIDQEKAKKLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAM 177
+K+ F DF++Q V MG M ++GMIPG+G ++ QV +K L +EA+
Sbjct: 321 EKLRKNEFTLEDFMEQMEQVRNMGPMDEILGMIPGLGGAKQLKNMQVD--DKHLDYIEAI 378
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MTPEER PE++ S RRKR+AQ SG + Q+V++L+ Q Q + MK L
Sbjct: 379 ISSMTPEERRDPEVINGS--RRKRIAQGSGTSIQEVNRLLKQFRQTKKMMKQL 429
>gi|116492613|ref|YP_804348.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|421894393|ref|ZP_16324882.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
gi|116102763|gb|ABJ67906.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|385272697|emb|CCG90254.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
Length = 476
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 162/244 (66%), Gaps = 9/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + +P E+LLVVDAMTGQ A FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ Q+ A EM
Sbjct: 262 SIRSVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKDFDQKQAAEMT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI FDFNDF+ Q V MG + ++ MIPGM PA V K L+ +A++
Sbjct: 322 QKIRENTFDFNDFVDQLNQVQNMGPIEDIMKMIPGMAN-NPAMQNVNVDPKDLEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT ERE P+LL +P RR+R+A SG+ +V++++ Q Q MK +M M G+
Sbjct: 381 YSMTKAERENPDLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----MKKMMNQMSKGN 434
Query: 239 LPAL 242
+
Sbjct: 435 FNGM 438
>gi|323456635|gb|EGB12501.1| putative GTP binding signal recognition particle protein SRP54
[Aureococcus anophagefferens]
Length = 530
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 159/235 (67%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ V+ P E LLV+DAMTGQ+AA+L F+ +TG++LTKLDGD+RGGAAL
Sbjct: 254 LMAELRSVRAATKPDETLLVLDAMTGQDAASLAKRFDDACPLTGSVLTKLDGDARGGAAL 313
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ VSGKPIK VG GE++ DLEPF+P RMA RILGMGDV+S VEKA + +A+ +
Sbjct: 314 SVRAVSGKPIKFVGVGEKVGDLEPFFPARMASRILGMGDVVSLVEKASKQQSAAEAKAVM 373
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
++ A F+F+D+L Q R V+ MGS V M+PGMG I Q+ AE +KI ++I +
Sbjct: 374 ERTKQAKFNFDDYLDQARMVSNMGSFGAVAKMMPGMGGIDNDQIAAAEAKIKIQASLINS 433
Query: 181 MTPEEREKPELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER +P+L+ + R+KR+A SG++ Q Q +++ QMR M + G
Sbjct: 434 MTPKERGEPDLIIRDKSALARQKRIAAGSGRSVDQAKQFLSEFQQMRTMMAKMAG 488
>gi|397904685|ref|ZP_10505586.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
gi|397162281|emb|CCJ32920.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
Length = 459
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 160/232 (68%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K+ +NP E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMLELEGIKKEVNPDEILLVVDAMTGQDAVNVAQSFNDKLDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK G GE++ DLE FYPDRMA RILGMGD+LS +EKAQ+ + ++ A EMQ
Sbjct: 261 SVKAVTGKPIKYAGVGEKLSDLEIFYPDRMASRILGMGDILSLIEKAQQAIDEKKALEMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMI 178
+K+ F DFL Q + + ++G + +I MIPG+ K+ E EK + +EA+I
Sbjct: 321 QKLERQEFTLEDFLDQMQQMKKLGPLKDLIKMIPGLDTSKLDDIDFEENEKEMAKIEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
++MT EER P ++ S R+KR+A+ SG T Q V++L+ Q R MK
Sbjct: 381 KSMTKEERRNPSIINSS--RKKRIAKGSGTTIQDVNKLLNNFEQARKMMKQF 430
>gi|218130040|ref|ZP_03458844.1| hypothetical protein BACEGG_01625 [Bacteroides eggerthii DSM 20697]
gi|317476534|ref|ZP_07935781.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
gi|217987760|gb|EEC54087.1| signal recognition particle protein [Bacteroides eggerthii DSM
20697]
gi|316907277|gb|EFV28984.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
Length = 440
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 160/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKAAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|347525650|ref|YP_004832398.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
gi|345284609|gb|AEN78462.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
Length = 493
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAAL
Sbjct: 214 LMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAAL 273
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 274 SIRAVTGKPIKFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQQDFDQKKAEELA 333
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++
Sbjct: 334 DKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIV 392
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP+ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+
Sbjct: 393 YSMTPDEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGN 446
Query: 239 LPALSNL 245
+ N+
Sbjct: 447 FGGMENM 453
>gi|148261145|ref|YP_001235272.1| signal recognition particle protein [Acidiphilium cryptum JF-5]
gi|146402826|gb|ABQ31353.1| signal recognition particle subunit FFH/SRP54 (srp54) [Acidiphilium
cryptum JF-5]
Length = 457
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 167/231 (72%), Gaps = 6/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE+K ++ V P E LLVVDAMTGQ+A A T FN + ITG ++T+LDGD+RGGAAL
Sbjct: 202 LMDEVKAIRDVTAPAETLLVVDAMTGQDALATATAFNEAVSITGIVMTRLDGDARGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIKL+G GE+++ LEPF+P+R+AGRILGMGD++S VEKA E + Q+ AE++
Sbjct: 262 SMRAVTGAPIKLMGMGEKLDALEPFHPERIAGRILGMGDIVSLVEKAAENVDQQKAEQLA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AM 177
KK+ FD D+ +Q + + +MGS+S ++GM+PG+GKI Q+ EA+ I++ A+
Sbjct: 322 KKMARGKFDLEDYAEQLKQITKMGSLSGIMGMLPGVGKIKQ-QLAEADLDTSILKRQAAI 380
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
I +MT ER P+++ S R+KRVA SG + Q+V++L+ Q QM+ MK
Sbjct: 381 ISSMTKAERANPDIMKAS--RKKRVAAGSGTSVQEVNRLLKQFEQMKDMMK 429
>gi|431771034|ref|ZP_19559423.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|431772480|ref|ZP_19560819.1| signal recognition particle protein [Enterococcus faecium E2369]
gi|430634058|gb|ELB70199.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|430637931|gb|ELB73923.1| signal recognition particle protein [Enterococcus faecium E2369]
Length = 472
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+
Sbjct: 322 QKMRENSFDFNDFIEQLDQVVGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 165/234 (70%), Gaps = 7/234 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+++E K +K NP EVL V+DAMTGQE+ + FN +G+TG +LTK+D D+RGG AL
Sbjct: 199 LLEEAKRIKEETNPDEVLFVIDAMTGQESVNIAKAFNEAVGMTGIVLTKMDSDARGGVAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK G GE++ED +PFYPDR+A RILGMGD++S VEKAQEV+ +++A MQ
Sbjct: 259 SVKGVTGKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIVSLVEKAQEVIDEKEALSMQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREA--EKSLKIMEA 176
+K++S F DF KQ + + R+G + +VI MIPG+G KI Q+ E +K LK +EA
Sbjct: 319 EKLLSGEFTLEDFRKQLQMIQRLGPLQQVIRMIPGLGSQKILK-QLEEVIDDKKLKRIEA 377
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+I +MTPEER ++ S R++R+A+ SG + ++V L+ Q QM++ MK +
Sbjct: 378 IINSMTPEERRNHAIINAS--RKRRIARGSGTSVKEVDALLKQFVQMKMAMKQM 429
>gi|379731428|ref|YP_005323624.1| signal recognition particle protein [Saprospira grandis str. Lewin]
gi|378577039|gb|AFC26040.1| signal recognition particle protein [Saprospira grandis str. Lewin]
Length = 447
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 161/245 (65%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ VK + PTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAAL
Sbjct: 201 MMTEIAAVKEAIQPTETLFVVDSMTGQDAVNTAKAFNDRINYDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K GKPIK + GE+M+ L+ F+PDRMA RILGMGD++S VEKAQE +++A+ ++
Sbjct: 261 SIKYTVGKPIKFISMGEKMDTLDIFHPDRMAQRILGMGDIISLVEKAQEDFDEKEAKRLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ +IGMIPGMGKI + + + +EA+I +
Sbjct: 321 KKIRKNQFDFNDFLKQLAQIRKMGNLKSLIGMIPGMGKIAK-DIDIDDNAFNKIEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P ++ S R+KR+A+ SG ++++Q + Q QMR M + + GG
Sbjct: 380 MTPEERGNPGVINGS--RKKRIAKGSGNRVEEINQFLRQFEQMRKMMFQMSKMQAGGGNM 437
Query: 241 ALSNL 245
+ N+
Sbjct: 438 RMPNI 442
>gi|390934862|ref|YP_006392367.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570363|gb|AFK86768.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 446
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 159/230 (69%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++P E+LLVVDAMTGQ+ + +FN ++ + G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKDAVHPDEILLVVDAMTGQDVVNVAESFNEKLDVDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ KPIK + GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+Q
Sbjct: 261 SVKAVTHKPIKFIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ F F+DFL Q + + MG + ++ MIPG+ + ++K +K +EA+I++
Sbjct: 321 KKILEQQFSFDDFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGINISDKDIKRIEAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P ++ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 381 MTKEERQNPSIINGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|304384767|ref|ZP_07367113.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
gi|304328961|gb|EFL96181.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
Length = 487
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 163/242 (67%), Gaps = 9/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 212 LMQELADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAAL 271
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM
Sbjct: 272 SIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMS 331
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI FDFNDFL Q V MG + ++ MIPGM PA + K ++ +A++
Sbjct: 332 QKIRENTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIV 390
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVM 234
+MT +ERE P++L +P RR+R+A SG+ +V++++ Q QM+ M + G M
Sbjct: 391 YSMTKQERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPM 448
Query: 235 EG 236
EG
Sbjct: 449 EG 450
>gi|24379497|ref|NP_721452.1| signal recognition particle protein [Streptococcus mutans UA159]
gi|449864523|ref|ZP_21778423.1| signal recognition particle protein [Streptococcus mutans U2B]
gi|449870470|ref|ZP_21780642.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449984811|ref|ZP_21819282.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|450081930|ref|ZP_21852033.1| signal recognition particle protein [Streptococcus mutans N66]
gi|26007034|sp|Q54431.3|SRP54_STRMU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|24377436|gb|AAN58758.1|AE014944_8 signal recognition particle protein subunit, Ffh [Streptococcus
mutans UA159]
gi|449156378|gb|EMB59847.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449179745|gb|EMB81936.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|449214694|gb|EMC14933.1| signal recognition particle protein [Streptococcus mutans N66]
gi|449264947|gb|EMC62280.1| signal recognition particle protein [Streptococcus mutans U2B]
Length = 516
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MGSM ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449899617|ref|ZP_21791113.1| signal recognition particle protein [Streptococcus mutans R221]
gi|449258112|gb|EMC55708.1| signal recognition particle protein [Streptococcus mutans R221]
Length = 516
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MGSM ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIE 179
K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++
Sbjct: 321 MKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVR 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT EER+ P+L+ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 381 SMTNEERQDPDLINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|338214863|ref|YP_004658926.1| signal recognition particle protein [Runella slithyformis DSM
19594]
gi|336308692|gb|AEI51794.1| signal recognition particle protein [Runella slithyformis DSM
19594]
Length = 437
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 166/238 (69%), Gaps = 10/238 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++++K + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMKEVENIKSSIKPSEILFVVDSMTGQDAVNTAKTFNERLNFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++++ KPIK + GE+ME L+ FYPDRMA RILGMGDVLS VE+AQ+ +++A+ +
Sbjct: 259 SIRQIVEKPIKYISTGEKMEALDSFYPDRMASRILGMGDVLSLVERAQQAFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
K+ + FDFNDFL Q + + +MG++ ++GMIPGMG + +++ E S K +EA+
Sbjct: 319 AKMRANKFDFNDFLGQLQQIKKMGNVKDLLGMIPGMG----SAMKDMEIDNDSFKPIEAI 374
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
I +MTP+ERE P+++ S R+KR+A SG + QQV+ L+ Q +MR MK M ME
Sbjct: 375 IHSMTPKERENPDVIDGS--RKKRIAGGSGTSLQQVNNLLKQFDEMRKMMKK-MNTME 429
>gi|326404546|ref|YP_004284628.1| signal recognition particle protein [Acidiphilium multivorum
AIU301]
gi|325051408|dbj|BAJ81746.1| signal recognition particle protein [Acidiphilium multivorum
AIU301]
Length = 462
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 167/231 (72%), Gaps = 6/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE+K ++ V P E LLVVDAMTGQ+A A T FN + ITG ++T+LDGD+RGGAAL
Sbjct: 207 LMDEVKAIRDVTAPAETLLVVDAMTGQDALATATAFNEAVSITGIVMTRLDGDARGGAAL 266
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIKL+G GE+++ LEPF+P+R+AGRILGMGD++S VEKA E + Q+ AE++
Sbjct: 267 SMRAVTGAPIKLMGMGEKLDALEPFHPERIAGRILGMGDIVSLVEKAAENVDQQKAEQLA 326
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AM 177
KK+ FD D+ +Q + + +MGS+S ++GM+PG+GKI Q+ EA+ I++ A+
Sbjct: 327 KKMARGKFDLEDYAEQLKQITKMGSLSGIMGMLPGVGKIKQ-QLAEADLDTSILKRQAAI 385
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
I +MT ER P+++ S R+KRVA SG + Q+V++L+ Q QM+ MK
Sbjct: 386 ISSMTKAERANPDIMKAS--RKKRVAAGSGTSVQEVNRLLKQFEQMKDMMK 434
>gi|149280108|ref|ZP_01886232.1| signal recognition particle protein [Pedobacter sp. BAL39]
gi|149229122|gb|EDM34517.1| signal recognition particle protein [Pedobacter sp. BAL39]
Length = 446
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ VK P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 199 MMDEIAAVKENTKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+Q
Sbjct: 259 SIKSVVNKPIKFIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQ 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+ K+ V + + K +EA+I++
Sbjct: 319 KKIRKNKFDFNDFYSQIQQIKKMGNMKDLMGMIPGVSKMMK-NVEIEDDAFKNVEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ERE P+ + +S RR R+A+ SG + V++L+ Q MR MK
Sbjct: 378 MTKYERENPDSIQQS--RRARIAKGSGNKVEDVTKLIKQFEDMRKVMKQF 425
>gi|1850607|gb|AAB48050.1|AAB48050 Ffh [Streptococcus mutans]
Length = 516
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 164/239 (68%), Gaps = 10/239 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAM 177
+K+ +FDFNDF++Q V MGSM ++ MIPGM + +V E E + K A+
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMANNPALANVEVDEGEIARK--RAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+ +MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 380 VSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|452974499|gb|EME74319.1| signal recognition particle protein [Bacillus sonorensis L12]
Length = 446
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKKVKETSQPDEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMKTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVKVDEKQLSHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|300854474|ref|YP_003779458.1| signal recognition particle GTPase [Clostridium ljungdahlii DSM
13528]
gi|300434589|gb|ADK14356.1| predicted signal recognition particle GTPase [Clostridium
ljungdahlii DSM 13528]
Length = 449
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 168/238 (70%), Gaps = 2/238 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK +K +NP E++LVVDAMTGQ+A + ++FN ++ I+G ILTKLDGD+RGGAAL
Sbjct: 201 LMGELKQIKENINPDEIMLVVDAMTGQDAVNVASSFNEQLNISGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++ KPIK VG GE+M DL+ FYPDRMA RILGMGDVLS +EKAQ+ + +E+AE++
Sbjct: 261 SIRAMTDKPIKFVGMGEKMNDLQVFYPDRMASRILGMGDVLSLIEKAQQSIDKEEAEKLG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMI 178
++++ F+F DFL + +MG +S+++ M+PG M ++ + E+ L +E +I
Sbjct: 321 NRMLNKEFNFEDFLAIMQQTKKMGPISKLMEMVPGVNMKELKGVDFSKGEQELAKIECII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT +ER P +++ S R+KR+A SG T Q V++L+ +++ MK L G+ +G
Sbjct: 381 NSMTVKERRNPSIISGSSSRKKRIALGSGTTIQMVNKLLKDFEKIKKTMKQLNGMKKG 438
>gi|311746104|ref|ZP_07719889.1| signal recognition particle protein [Algoriphagus sp. PR1]
gi|126576323|gb|EAZ80601.1| signal recognition particle protein [Algoriphagus sp. PR1]
Length = 444
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 172/258 (66%), Gaps = 14/258 (5%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLDFNGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRM+ RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENIDVFHPDRMSQRILGMGDVISLVERAQQSFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI NF+F+DFL Q V +MG++ ++GMIPGMGK + + S K +EA+I++
Sbjct: 319 AKIRQNNFNFDDFLSQLEQVKKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFKPIEAIIKS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER +P+++ S RRKR+A SG+T +V+ L+ Q MR MK + + GG+
Sbjct: 378 MTPKERHQPDIIDGS--RRKRIANGSGRTITEVNNLMKQFSDMRKMMKQMNKM--GGAKA 433
Query: 241 ALSNLEDALKSEQKAPPG 258
A+S L PPG
Sbjct: 434 AMSKL---------MPPG 442
>gi|417959779|ref|ZP_12602515.1| Signal recognition particle GTPase Ffh [Candidatus Arthromitus sp.
SFB-1]
gi|380332620|gb|EIA23391.1| Signal recognition particle GTPase Ffh [Candidatus Arthromitus sp.
SFB-1]
Length = 272
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG AL
Sbjct: 19 LMNELKEIKELSDPSEILMVIDSMIGQESVNIAETFNDKLDVTGFVLTKLDGDTRGGVAL 78
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEV GK IK +G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + Q++A+++
Sbjct: 79 SIKEVIGKNIKFIGVGEKIGDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDQDEAQKLS 138
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+++++ F+F DF + + ++GS S+++ MIPG G ++ + ++EK L +EA
Sbjct: 139 ERMLANEFNFEDFKSAMQQMKKIGSFSKILQMIPGFGNSMKELKNINLDDSEKELCKIEA 198
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+I +MT +ER+ P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 199 IINSMTIKERKNPKLLMGSASRKSRIAKGSGSTVNQVNKLIKDFENMSKMMKQFKGM 255
>gi|265751175|ref|ZP_06087238.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|423228545|ref|ZP_17214951.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|423243810|ref|ZP_17224886.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
gi|263238071|gb|EEZ23521.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|392635952|gb|EIY29840.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|392644176|gb|EIY37919.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
Length = 440
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKKAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|404329162|ref|ZP_10969610.1| signal recognition particle protein [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 447
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 161/233 (69%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K V +P E+ LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAAL
Sbjct: 202 LMEELEQIKSVSHPDEIFLVVDAMTGQDAVNVAGAFNDRLDITGVIMTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A EM
Sbjct: 262 SIRSVTGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQNTVDEEKAREMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ + +F +DFL+Q + +MG + ++ M+PG K + ++ EK + +EAMI
Sbjct: 322 KKLQTVSFTLDDFLEQIGQIRKMGPLQDLLAMMPGANKFKGMKNMQIDEKKIDQVEAMIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MTP E+ P+++ S RRKR+A SG + V++L+ Q M+ MK MG
Sbjct: 382 SMTPLEKNDPDIINAS--RRKRIALGSGTSIADVNRLLKQFKDMKKMMKQFMG 432
>gi|342732348|ref|YP_004771187.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455751|ref|YP_005668346.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417962271|ref|ZP_12604520.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|417962397|ref|ZP_12604607.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|417965566|ref|ZP_12607074.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968297|ref|ZP_12609330.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|418016250|ref|ZP_12655815.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372604|ref|ZP_12964696.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329803|dbj|BAK56445.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506585|gb|EGX28879.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984094|dbj|BAK79770.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330716|gb|EIA21901.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|380336378|gb|EIA26396.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|380337762|gb|EIA26772.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|380339962|gb|EIA28617.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|380342273|gb|EIA30718.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 454
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG AL
Sbjct: 201 LMNELKEIKELSDPSEILMVIDSMIGQESVNIAETFNDKLDVTGFVLTKLDGDTRGGVAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEV GK IK +G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + Q++A+++
Sbjct: 261 SIKEVIGKNIKFIGVGEKIGDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDQDEAQKLS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+++++ F+F DF + + ++GS S+++ MIPG G ++ + ++EK L +EA
Sbjct: 321 ERMLANEFNFEDFKSAMQQMKKIGSFSKILQMIPGFGNSMKELKNINLDDSEKELCKIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+I +MT +ER+ P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 381 IINSMTIKERKNPKLLMGSASRKSRIAKGSGSTVNQVNKLIKDFENMSKMMKQFKGM 437
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V +P +LLVVDAMTGQ A + F+ + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDERLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPEERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|212693973|ref|ZP_03302101.1| hypothetical protein BACDOR_03497 [Bacteroides dorei DSM 17855]
gi|237710361|ref|ZP_04540842.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|345516836|ref|ZP_08796322.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|423239666|ref|ZP_17220782.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
gi|212663505|gb|EEB24079.1| signal recognition particle protein [Bacteroides dorei DSM 17855]
gi|229437723|gb|EEO47800.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|229455823|gb|EEO61544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392645706|gb|EIY39429.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
Length = 440
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKKAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|449931990|ref|ZP_21802581.1| signal recognition particle protein [Streptococcus mutans 3SN1]
gi|449161857|gb|EMB65027.1| signal recognition particle protein [Streptococcus mutans 3SN1]
Length = 516
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF+KQ V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIKQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|410584603|ref|ZP_11321705.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
gi|410504189|gb|EKP93701.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
Length = 445
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 166/231 (71%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +++ + P E+LLVVDAMTGQ+A + TF+ +GI G ILTKLDGD+RGGAAL
Sbjct: 201 LMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVILTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+G+PIK G GER++ LEPF+P+RMA RILGMGDVLS +EKAQ V + A+ ++
Sbjct: 261 SVRAVTGRPIKFAGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAVFDAQQAQRLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FD DFL+Q R V +MG + +++ MIPG+ G++ V E E L+ +EA+I+
Sbjct: 321 RKLREQAFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGGRLKDVTVDERE--LRRIEAIIQ 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER +PE++ S RR+R+A SG Q V++L+ Q + + MK +
Sbjct: 379 SMTPEERRRPEIINAS--RRRRIAMGSGTRVQDVNRLLKQFAETQRLMKQV 427
>gi|256847356|ref|ZP_05552802.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
gi|256716020|gb|EEU30995.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
Length = 480
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 171/249 (68%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVDAMTGQ A A F+ ++ +TG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELAQPNEILLVVDAMTGQNAVATAQGFDDKLDVTGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+ME+L+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMENLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ + FD+NDFL Q ++ MG + ++ M+PGM PA + K ++A+I
Sbjct: 322 EKMRANEFDYNDFLAQLDQISNMGPLENILKMMPGMAN-NPALKNLNIDPKQFLHIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV 233
++MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N G+
Sbjct: 381 QSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFGQMRKMMKQVTNGNFSGM 438
Query: 234 --MEGGSLP 240
M GG +P
Sbjct: 439 QNMMGGQMP 447
>gi|336399713|ref|ZP_08580513.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
gi|336069449|gb|EGN58083.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
Length = 442
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEISSLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ + MIPG+GK V + +EA+I +
Sbjct: 320 KKIQKNKFDFNDFLKQIEQIKKMGNIKDLASMIPGVGKAIK-NVDIDNNAFNGIEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L +S R+ R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPQERTNPEILNQS--RKLRIAKGSGTTIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|270290355|ref|ZP_06196580.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|418069039|ref|ZP_12706319.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|427441885|ref|ZP_18925463.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
gi|270281136|gb|EFA26969.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|357537772|gb|EHJ21795.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|425786911|dbj|GAC46251.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
Length = 477
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 163/242 (67%), Gaps = 9/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELADIKDLAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM
Sbjct: 262 SIRAVTGKPIKFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI FDFNDFL Q V MG + ++ MIPGM PA + K ++ +A++
Sbjct: 322 QKIRENTFDFNDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVM 234
+MT +ERE P++L +P RR+R+A SG+ +V++++ Q QM+ M + G M
Sbjct: 381 YSMTKQERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPM 438
Query: 235 EG 236
EG
Sbjct: 439 EG 440
>gi|333031351|ref|ZP_08459412.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
gi|332741948|gb|EGJ72430.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
Length = 441
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESIKKAINPNEVLFVVDSMTGQDAVNTAKEFNERLNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +++A+++Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLEAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEDEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNQFDFNDFLSQIHQIKKMGNLKELAAMIPGVGKAIK-DIDIDDNAFKSIEAIIFS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER P L+ + RRKR+A SG T Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERTDPALI--NGTRRKRIADGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|257066792|ref|YP_003153048.1| signal recognition particle protein [Anaerococcus prevotii DSM
20548]
gi|256798672|gb|ACV29327.1| signal recognition particle protein [Anaerococcus prevotii DSM
20548]
Length = 445
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQEA + TF+ + ITG +LTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKEAVNPDEILLVVDAMTGQEAVNVAKTFDDYLDITGVVLTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE++EDLEPF+PDRMA RILGMGDVLS +EKA++ + E+A+E++
Sbjct: 260 SIRQVVGKPIKFIGVGEKLEDLEPFHPDRMANRILGMGDVLSLIEKAEKELSIENAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + +DF++Q + + MG + ++ MIPG+ V ++ +EA+I +
Sbjct: 320 RKMREQTYTLDDFMEQVQQIRNMGPLEDLLAMIPGVNSKMLKGVDIDDRGFVRIEALISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EEREKPE++ +S R++R+A+ SG +++++L+ Q
Sbjct: 380 MTKEEREKPEIIGKS--RKERIAKGSGVDIKELNKLLKQF 417
>gi|110639137|ref|YP_679346.1| signal recognition particle subunit FFH/SRP54 [Cytophaga
hutchinsonii ATCC 33406]
gi|110281818|gb|ABG60004.1| signal recognition particle subunit FFH/SRP54 (srp54) [Cytophaga
hutchinsonii ATCC 33406]
Length = 443
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 166/240 (69%), Gaps = 4/240 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +VK+ + P+E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAA+
Sbjct: 199 MMNEIAEVKKAIQPSETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQ+V +E+ +++
Sbjct: 259 SIRAVVEKPIKFISTGEKMDALDVFYPERMASRILGMGDVVSLVERAQQVFDEEETKKLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F+F DFL Q + + +MGS+ ++GMIPGMGK+ + + + K +EA+I +
Sbjct: 319 QKLRKNQFNFEDFLNQIQQIKKMGSIKDLVGMIPGMGKMMK-DLPIDDDAFKPIEAIIFS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT EERE P+LL+ + RR R+A+ SG + QQV+ L+ Q MR MK+ M M+G +P
Sbjct: 378 MTKEERENPDLLSGN--RRNRIAKGSGTSIQQVNNLLKQFEDMRKMMKS-MNKMQGKGIP 434
>gi|330996193|ref|ZP_08320083.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
gi|329573697|gb|EGG55288.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
Length = 451
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 155/232 (66%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMQEIAAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIAKNQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGKALK-DVEIDDNAFKSIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPRERTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|163790804|ref|ZP_02185229.1| signal recognition particle protein [Carnobacterium sp. AT7]
gi|159873872|gb|EDP67951.1| signal recognition particle protein [Carnobacterium sp. AT7]
Length = 437
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 7/240 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K PTE+ LVVDAMTGQEAA + +F+ ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMQELSDIKETTQPTEIFLVVDAMTGQEAANVAASFDEQLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ +EEM
Sbjct: 262 SIRAVTGKPIKFTGSGEKLDALEPFYPDRMANRILGMGDMLTLIEKAQQDFDEKKSEEMI 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
K+ +FDFNDF++Q V+ MG + ++ MIPGM + + + K M+A++
Sbjct: 322 TKLRENSFDFNDFIEQMDQVSNMGPIEDILKMIPGMNNVPGLDKLQIDPKDTARMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP+ERE P++L++S RR+R+A+ S + +V++++ Q + K +M M G++
Sbjct: 382 SMTPQERENPDILSQS--RRRRIARGSARPIAEVNRMIKQFNE----SKKMMSQMSKGNM 435
>gi|222153046|ref|YP_002562223.1| signal recognition particle protein [Streptococcus uberis 0140J]
gi|222113859|emb|CAR41999.1| signal recognition particle protein [Streptococcus uberis 0140J]
Length = 521
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMAELRDIKALANPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQRSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EERE PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTKEERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|167761983|ref|ZP_02434110.1| hypothetical protein BACSTE_00328 [Bacteroides stercoris ATCC
43183]
gi|167700215|gb|EDS16794.1| signal recognition particle protein [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 160/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKSAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|419718417|ref|ZP_14245736.1| signal recognition particle protein [Lachnoanaerobaculum saburreum
F0468]
gi|383305451|gb|EIC96817.1| signal recognition particle protein [Lachnoanaerobaculum saburreum
F0468]
Length = 451
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 170/236 (72%), Gaps = 5/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K +N +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMNELIEIKDNVNVDDIILVVDAMTGQDAVNVAETFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+KI A+FDFNDFL+Q + +MG M+ ++ M+PG+ GK QV + + +KI +A+I+
Sbjct: 322 QKIAKADFDFNDFLEQLEQLEKMGGMASILSMLPGIGGKSALPQVDDGQ-MVKI-KAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
+M+ +ER P LL +P R+ R+A+ SG +V++LV Q QM+ MK G+M+
Sbjct: 380 SMSKKERLDPSLL--NPSRKNRIAKGSGVNIGEVNRLVKQFEQMKKMMKQFPGMMK 433
>gi|403745347|ref|ZP_10954285.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121575|gb|EJY55868.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 467
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 166/234 (70%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K + PTE+LLVVDAMTGQ+A + TF+ +G+TG ILTKLDGD+RGGAAL
Sbjct: 179 LMEELEGMKAAVQPTEILLVVDAMTGQDAVHVAETFHQRLGVTGVILTKLDGDARGGAAL 238
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+V+ V+G PIK VG GE++E LEPF+PDR+A RILGMGDVLS +E+AQE + E A+EM+
Sbjct: 239 TVRAVTGCPIKYVGLGEKIEPLEPFHPDRLASRILGMGDVLSLIERAQERIDLEKAKEME 298
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
++ +++F NDF + R V +G + +V+ MIPGM ++ + + ++ M+A+I
Sbjct: 299 ARMRTSSFTLNDFQEMFRQVRNLGPLDQVLKMIPGMNRMKGLENIDLNDRRFLRMDAIIS 358
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTP ERE P ++ S RR+R+A SG T ++V+QL+ Q Q R MK G+
Sbjct: 359 SMTPAEREDPSVMNAS--RRRRIANGSGTTVREVNQLLNQFEQTREMMKRFTGM 410
>gi|387786156|ref|YP_006251252.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449908233|ref|ZP_21793580.1| signal recognition particle protein [Streptococcus mutans OMZ175]
gi|379132557|dbj|BAL69309.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449263047|gb|EMC60481.1| signal recognition particle protein [Streptococcus mutans OMZ175]
Length = 516
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALANVKVNEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|329955639|ref|ZP_08296547.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
gi|328526042|gb|EGF53066.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
Length = 440
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 160/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKAAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPEERSNPAILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|150004753|ref|YP_001299497.1| signal recognition protein [Bacteroides vulgatus ATCC 8482]
gi|294775183|ref|ZP_06740709.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|319641812|ref|ZP_07996491.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|345518550|ref|ZP_08797997.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|423312329|ref|ZP_17290266.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
gi|149933177|gb|ABR39875.1| putative signal recognition protein [Bacteroides vulgatus ATCC
8482]
gi|254835935|gb|EET16244.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|294450995|gb|EFG19469.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|317386568|gb|EFV67468.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|392688813|gb|EIY82097.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
Length = 440
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKKAVNPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 379 MTPQERTNPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMP 436
Query: 241 AL 242
L
Sbjct: 437 KL 438
>gi|408492133|ref|YP_006868502.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
gi|408469408|gb|AFU69752.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
Length = 442
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 152/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ D+ + + P E L VVDAMTGQ+A TFN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMNEISDIYKAVKPQETLFVVDAMTGQDAVNTAKTFNDVLDFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEDEARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + V +MGSM ++GMIPG GK+ + + + K +EAMI +
Sbjct: 320 KKIAKDKFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGKMMK-NMDIDDDAFKHIEAMIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ERE P + S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 379 MTPHERENPTSINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|373500244|ref|ZP_09590631.1| signal recognition particle protein [Prevotella micans F0438]
gi|371954375|gb|EHO72188.1| signal recognition particle protein [Prevotella micans F0438]
Length = 444
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEALDTFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF KQ + + +MG++ + MIPG+GK V + S K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYKQIQQIKKMGNLKDLASMIPGVGK-AIRDVDIDDNSFKSVEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PELL S RR+R+A+ SG +V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPELLNTS--RRQRIAKGSGTNILEVNRLIKQFDQTRKMMKMVTG 428
>gi|341821055|emb|CCC57389.1| signal recognition particle protein Ffh [Weissella thailandensis
fsh4-2]
Length = 485
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 8/239 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E++LVVDAMTGQ A FN + ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADVKDIAQPDEIMLVVDAMTGQNAVETAEGFNNRLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDYDEKQANETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ S FDFNDF+ Q + MGSM ++ MIPGM PA + K + + A++
Sbjct: 322 EKMKSNTFDFNDFIDQMDQLQNMGSMEDIMKMIPGMAN-NPALKNAKIDPKDMAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEERE P++L +P R++R+A +G+ +V+++V Q QM+ K + GVM G
Sbjct: 381 MSMTPEERENPDVL--NPSRKRRLAAGAGRPVVEVNRMVKQFNQMK---KMMSGVMNGN 434
>gi|227551902|ref|ZP_03981951.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257884147|ref|ZP_05663800.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257886935|ref|ZP_05666588.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257895507|ref|ZP_05675160.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257898122|ref|ZP_05677775.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|293378372|ref|ZP_06624541.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|293571524|ref|ZP_06682547.1| signal recognition particle protein [Enterococcus faecium E980]
gi|424766376|ref|ZP_18193729.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430841665|ref|ZP_19459584.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430851902|ref|ZP_19469637.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430855109|ref|ZP_19472820.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|431033237|ref|ZP_19491083.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|431076960|ref|ZP_19494996.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|431108321|ref|ZP_19497472.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|431586239|ref|ZP_19520754.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|431737188|ref|ZP_19526142.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|431739675|ref|ZP_19528595.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|431752200|ref|ZP_19540884.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|431757047|ref|ZP_19545678.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|431762305|ref|ZP_19550867.1| signal recognition particle protein [Enterococcus faecium E3548]
gi|227178974|gb|EEI59946.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257819985|gb|EEV47133.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257822989|gb|EEV49921.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257832072|gb|EEV58493.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257836034|gb|EEV61108.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|291608390|gb|EFF37689.1| signal recognition particle protein [Enterococcus faecium E980]
gi|292643236|gb|EFF61377.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|402410897|gb|EJV43285.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430494441|gb|ELA70691.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430542484|gb|ELA82592.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430547647|gb|ELA87570.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|430564338|gb|ELB03522.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|430566415|gb|ELB05528.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|430569445|gb|ELB08449.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|430593417|gb|ELB31403.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|430598845|gb|ELB36561.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|430604291|gb|ELB41782.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|430614124|gb|ELB51117.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|430619336|gb|ELB56163.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|430624997|gb|ELB61647.1| signal recognition particle protein [Enterococcus faecium E3548]
Length = 472
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+
Sbjct: 322 QKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|294622904|ref|ZP_06701817.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|425030604|ref|ZP_18435770.1| signal recognition particle protein [Enterococcus faecium 515]
gi|431301266|ref|ZP_19507585.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|431775548|ref|ZP_19563820.1| signal recognition particle protein [Enterococcus faecium E2560]
gi|291597676|gb|EFF28829.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|403017277|gb|EJY30044.1| signal recognition particle protein [Enterococcus faecium 515]
gi|430580456|gb|ELB18923.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|430642817|gb|ELB78583.1| signal recognition particle protein [Enterococcus faecium E2560]
Length = 472
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+
Sbjct: 322 QKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|384135024|ref|YP_005517738.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289109|gb|AEJ43219.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 479
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 165/233 (70%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K+VL P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 199 LMGELEAMKKVLEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+V+ +G PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+
Sbjct: 259 TVRAATGCPIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIE 179
++ SANF +DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I
Sbjct: 319 ARMRSANFTLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIIS 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MTPEER P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 379 SMTPEERRDPGILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|389573280|ref|ZP_10163355.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
gi|388426977|gb|EIL84787.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
Length = 447
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 169/231 (73%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E++
Sbjct: 262 SIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK +
Sbjct: 382 SMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQM 430
>gi|315924205|ref|ZP_07920431.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622607|gb|EFV02562.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 449
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 161/230 (70%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +++PTE LLVVD MTGQE+ + +F+ ++ I+G +LTKLDGD+RGGAAL
Sbjct: 203 LMRELMDIKELVHPTETLLVVDGMTGQESVNVAKSFDDQLDISGVVLTKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV +GKPI +G GE++ DLE F+PDRMA RILGMGDVLS ++KAQE++ +E A M+
Sbjct: 263 SVTYTTGKPIVFIGSGEKLSDLERFHPDRMASRILGMGDVLSLIDKAQEMVDEEQARAME 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+KI A FD +DFL Q + +MGS++ ++ M+PGM K A + + E+ K EA+I
Sbjct: 323 EKIRKATFDLSDFLDQLHQLQKMGSLTSLLEMMPGMNKKALAGLDMVKTEQQTKRTEAII 382
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
AMTPEER KPE++ S RRKR+A SG + V++L+ Q R MK
Sbjct: 383 YAMTPEERAKPEIINGS--RRKRIANGSGTSVADVNRLLKGFDQSRKMMK 430
>gi|402834421|ref|ZP_10883023.1| signal recognition particle protein [Selenomonas sp. CM52]
gi|402278039|gb|EJU27105.1| signal recognition particle protein [Selenomonas sp. CM52]
Length = 456
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 159/224 (70%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K + P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMQELKDIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+
Sbjct: 261 SVKAVTGCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
KK+ A+F +DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA
Sbjct: 321 KKLRKADFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I++MTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 381 IIKSMTPKERADISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|357038757|ref|ZP_09100554.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355359549|gb|EHG07311.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 454
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 162/232 (69%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL ++ + P E+LLVVD+MTGQ+A + TFN + +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMTELHNIVETVGPNEILLVVDSMTGQDAVNVAKTFNERLSLTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE+++ LE F+PDRMA RILGMGD+L+ +EKAQ QE E++
Sbjct: 261 SVKAVTGCPIKFVGMGEKLDALEDFHPDRMADRILGMGDMLTLIEKAQANFDQEQVEKLN 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
K+I S F +DF++Q V +MG + +++GMIPG+G + + E +K L +EA+I
Sbjct: 321 KRIRSMEFTLDDFVQQLNQVKKMGPIDQILGMIPGLGGVKKLKDLEVDDKDLVFVEAIIN 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTP ER+ P+ + S RR+R+A+ SG + Q+V++L+ Q Q R M+ LM
Sbjct: 381 SMTPWERQHPQEINGS--RRRRIARGSGTSVQEVNRLLKQFEQTRKMMRQLM 430
>gi|319649591|ref|ZP_08003747.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
gi|317398753|gb|EFV79435.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 168/236 (71%), Gaps = 3/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELSNPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK VG GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + +E A+E++
Sbjct: 262 SIRSVTNTPIKFVGLGEKLDALEAFHPERMASRILGMGDVLSLIEKAQANVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A+F F+DFL Q V MG + ++ M+PG KI ++ EK + +EA+I+
Sbjct: 322 QKMRTASFTFDDFLDQLGQVRSMGPLDELLKMMPGANKIKGLNNIQIDEKQITHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
+MT EE+ PE++ S RRKR+A+ SG+T +V++L+ Q M+ MK + G+ +
Sbjct: 382 SMTKEEKTHPEIINAS--RRKRIAKGSGRTVPEVNRLLKQFEDMKKMMKQMAGMQQ 435
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPEERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|69248474|ref|ZP_00604748.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257878620|ref|ZP_05658273.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257883120|ref|ZP_05662773.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257891867|ref|ZP_05671520.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257894437|ref|ZP_05674090.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260559333|ref|ZP_05831515.1| signal recognition particle protein [Enterococcus faecium C68]
gi|261208009|ref|ZP_05922687.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289566895|ref|ZP_06447302.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|293556478|ref|ZP_06675052.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|293563841|ref|ZP_06678274.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|293567270|ref|ZP_06678624.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|294615586|ref|ZP_06695442.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|294619810|ref|ZP_06699200.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|314938080|ref|ZP_07845388.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|314943602|ref|ZP_07850359.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|314949239|ref|ZP_07852588.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|314952611|ref|ZP_07855603.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|314992459|ref|ZP_07857881.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|314997379|ref|ZP_07862334.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|383329196|ref|YP_005355080.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|389869023|ref|YP_006376446.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|406581072|ref|ZP_11056251.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|406583326|ref|ZP_11058408.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|406585675|ref|ZP_11060654.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|406591244|ref|ZP_11065537.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410936498|ref|ZP_11368363.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|415894168|ref|ZP_11550289.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|416142609|ref|ZP_11599613.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|424780120|ref|ZP_18207001.1| signal recognition particle protein [Enterococcus faecium V689]
gi|424802491|ref|ZP_18228004.1| signal recognition particle protein [Enterococcus faecium S447]
gi|424850064|ref|ZP_18274479.1| signal recognition particle protein [Enterococcus faecium R501]
gi|424857588|ref|ZP_18281718.1| signal recognition particle protein [Enterococcus faecium R499]
gi|424907911|ref|ZP_18331345.1| signal recognition particle protein [Enterococcus faecium R497]
gi|424951324|ref|ZP_18366439.1| signal recognition particle protein [Enterococcus faecium R496]
gi|424953399|ref|ZP_18368365.1| signal recognition particle protein [Enterococcus faecium R494]
gi|424958870|ref|ZP_18373490.1| signal recognition particle protein [Enterococcus faecium R446]
gi|424962238|ref|ZP_18376608.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|424962648|ref|ZP_18376966.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|424968649|ref|ZP_18382259.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|424972691|ref|ZP_18386013.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|424975462|ref|ZP_18388619.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|424978927|ref|ZP_18391807.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|424980489|ref|ZP_18393283.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|424985230|ref|ZP_18397718.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|424988719|ref|ZP_18401022.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|424992574|ref|ZP_18404627.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|424996450|ref|ZP_18408257.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|424999108|ref|ZP_18410749.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|424999881|ref|ZP_18411474.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|425006151|ref|ZP_18417344.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|425009463|ref|ZP_18420482.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|425012624|ref|ZP_18423426.1| signal recognition particle protein [Enterococcus faecium E422]
gi|425015748|ref|ZP_18426339.1| signal recognition particle protein [Enterococcus faecium E417]
gi|425019469|ref|ZP_18429832.1| signal recognition particle protein [Enterococcus faecium C621]
gi|425020205|ref|ZP_18430524.1| signal recognition particle protein [Enterococcus faecium C497]
gi|425023133|ref|ZP_18433270.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|425035379|ref|ZP_18440220.1| signal recognition particle protein [Enterococcus faecium 514]
gi|425040142|ref|ZP_18444628.1| signal recognition particle protein [Enterococcus faecium 513]
gi|425043894|ref|ZP_18448093.1| signal recognition particle protein [Enterococcus faecium 511]
gi|425045035|ref|ZP_18449158.1| signal recognition particle protein [Enterococcus faecium 510]
gi|425050560|ref|ZP_18454293.1| signal recognition particle protein [Enterococcus faecium 509]
gi|425051000|ref|ZP_18454694.1| signal recognition particle protein [Enterococcus faecium 506]
gi|425055763|ref|ZP_18459232.1| signal recognition particle protein [Enterococcus faecium 505]
gi|425058389|ref|ZP_18461771.1| signal recognition particle protein [Enterococcus faecium 504]
gi|425062030|ref|ZP_18465213.1| signal recognition particle protein [Enterococcus faecium 503]
gi|427396388|ref|ZP_18889147.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430819711|ref|ZP_19438357.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430822757|ref|ZP_19441332.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430825710|ref|ZP_19443912.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430827813|ref|ZP_19445944.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430830914|ref|ZP_19448970.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430832888|ref|ZP_19450904.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430837718|ref|ZP_19455678.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430838321|ref|ZP_19456268.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430843828|ref|ZP_19461727.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430848123|ref|ZP_19465953.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430849397|ref|ZP_19467177.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430857923|ref|ZP_19475554.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430860428|ref|ZP_19478028.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430865375|ref|ZP_19481073.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430876823|ref|ZP_19483925.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430948278|ref|ZP_19485867.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|431003805|ref|ZP_19488903.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|431147517|ref|ZP_19499227.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|431230043|ref|ZP_19502246.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|431252112|ref|ZP_19504170.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|431373172|ref|ZP_19510081.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|431413391|ref|ZP_19512150.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|431497436|ref|ZP_19514590.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|431542316|ref|ZP_19518344.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|431730890|ref|ZP_19525566.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|431742899|ref|ZP_19531782.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|431746433|ref|ZP_19535259.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|431750302|ref|ZP_19539022.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|431755033|ref|ZP_19543691.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|431759542|ref|ZP_19548154.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|431764354|ref|ZP_19552897.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|431767459|ref|ZP_19555911.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|431780833|ref|ZP_19568998.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|431781698|ref|ZP_19569842.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|431785919|ref|ZP_19573940.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|447912364|ref|YP_007393776.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
gi|68194411|gb|EAN08916.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257812848|gb|EEV41606.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257818778|gb|EEV46106.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257828227|gb|EEV54853.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257830816|gb|EEV57423.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260074693|gb|EEW63013.1| signal recognition particle protein [Enterococcus faecium C68]
gi|260077767|gb|EEW65480.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289161301|gb|EFD09194.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|291590019|gb|EFF21813.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|291591529|gb|EFF23182.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|291593943|gb|EFF25427.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|291601357|gb|EFF31635.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|291604211|gb|EFF33712.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|313588547|gb|EFR67392.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|313593001|gb|EFR71846.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|313595279|gb|EFR74124.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|313597720|gb|EFR76565.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|313642569|gb|EFS07149.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|313644380|gb|EFS08960.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|364089611|gb|EHM32283.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|364092330|gb|EHM34712.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|378938890|gb|AFC63962.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|388534272|gb|AFK59464.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|402916210|gb|EJX37106.1| signal recognition particle protein [Enterococcus faecium R501]
gi|402919953|gb|EJX40511.1| signal recognition particle protein [Enterococcus faecium S447]
gi|402924607|gb|EJX44804.1| signal recognition particle protein [Enterococcus faecium V689]
gi|402928616|gb|EJX48462.1| signal recognition particle protein [Enterococcus faecium R499]
gi|402929375|gb|EJX49141.1| signal recognition particle protein [Enterococcus faecium R497]
gi|402930680|gb|EJX50312.1| signal recognition particle protein [Enterococcus faecium R496]
gi|402938666|gb|EJX57652.1| signal recognition particle protein [Enterococcus faecium R446]
gi|402939172|gb|EJX58110.1| signal recognition particle protein [Enterococcus faecium R494]
gi|402941446|gb|EJX60175.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|402951133|gb|EJX69084.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|402951484|gb|EJX69407.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|402952859|gb|EJX70629.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|402953431|gb|EJX71149.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|402959911|gb|EJX77113.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|402966338|gb|EJX82977.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|402966421|gb|EJX83049.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|402971075|gb|EJX87376.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|402972744|gb|EJX88923.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|402973572|gb|EJX89685.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|402980395|gb|EJX96006.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|402984170|gb|EJX99494.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|402989128|gb|EJY04080.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|402990604|gb|EJY05473.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|402992577|gb|EJY07267.1| signal recognition particle protein [Enterococcus faecium E422]
gi|402994145|gb|EJY08702.1| signal recognition particle protein [Enterococcus faecium E417]
gi|402997904|gb|EJY12200.1| signal recognition particle protein [Enterococcus faecium C621]
gi|403009720|gb|EJY23146.1| signal recognition particle protein [Enterococcus faecium C497]
gi|403010704|gb|EJY24057.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|403013586|gb|EJY26670.1| signal recognition particle protein [Enterococcus faecium 513]
gi|403017560|gb|EJY30299.1| signal recognition particle protein [Enterococcus faecium 511]
gi|403018194|gb|EJY30891.1| signal recognition particle protein [Enterococcus faecium 514]
gi|403023055|gb|EJY35348.1| signal recognition particle protein [Enterococcus faecium 509]
gi|403028037|gb|EJY39881.1| signal recognition particle protein [Enterococcus faecium 510]
gi|403033144|gb|EJY44663.1| signal recognition particle protein [Enterococcus faecium 505]
gi|403038537|gb|EJY49749.1| signal recognition particle protein [Enterococcus faecium 504]
gi|403039030|gb|EJY50209.1| signal recognition particle protein [Enterococcus faecium 506]
gi|403039670|gb|EJY50804.1| signal recognition particle protein [Enterococcus faecium 503]
gi|404453120|gb|EKA00214.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|404456877|gb|EKA03486.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|404462274|gb|EKA08055.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|404468030|gb|EKA13066.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410735141|gb|EKQ77057.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|425723058|gb|EKU85949.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430440303|gb|ELA50571.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430442686|gb|ELA52707.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430445868|gb|ELA55581.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430482503|gb|ELA59621.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430484159|gb|ELA61189.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430486938|gb|ELA63767.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430487045|gb|ELA63824.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430491916|gb|ELA68365.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430497687|gb|ELA73724.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430535954|gb|ELA76342.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430537855|gb|ELA78169.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430546403|gb|ELA86362.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430552087|gb|ELA91833.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430553028|gb|ELA92741.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430557495|gb|ELA96952.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430558051|gb|ELA97483.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|430561894|gb|ELB01148.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|430574029|gb|ELB12807.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|430575641|gb|ELB14346.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|430578538|gb|ELB17090.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|430583317|gb|ELB21701.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|430588371|gb|ELB26563.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|430589299|gb|ELB27437.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|430592880|gb|ELB30881.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|430595449|gb|ELB33352.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|430607562|gb|ELB44874.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|430608667|gb|ELB45906.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|430609840|gb|ELB47013.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|430618019|gb|ELB54876.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|430625942|gb|ELB62541.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|430630973|gb|ELB67311.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|430631539|gb|ELB67861.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|430638743|gb|ELB74653.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|430646636|gb|ELB82107.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|430648916|gb|ELB84305.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|445188073|gb|AGE29715.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
Length = 472
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+
Sbjct: 322 QKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERANPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 167/248 (67%), Gaps = 11/248 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELSHIKDAVEPNEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ ++ A+E+
Sbjct: 262 SIRAVTQKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
+KI FDFNDF+ Q + +MG + ++ MIPGM Q++ A K + ++A+
Sbjct: 322 EKIQENTFDFNDFVDQLNQIQKMGPLDEIMKMIPGMA--NNPQLKNANMDPKDMDHLKAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+ +MT +ER P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G
Sbjct: 380 VYSMTDQERTDPDVL--NPSRRRRIARGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKG 433
Query: 238 SLPALSNL 245
++ + N+
Sbjct: 434 NMSGMENM 441
>gi|291563269|emb|CBL42085.1| signal recognition particle protein [butyrate-producing bacterium
SS3/4]
Length = 454
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 162/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K + + +LVVDAMTGQ+A + +FN +IG+ G ILTKLDGD+RGGAAL
Sbjct: 202 MMDELVNIKEAVEIDQTILVVDAMTGQDAVNVAGSFNDKIGVDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ + +E A+EM
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEFEVSEEKAKEMS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FDFNDFL Q R + +MG M+ ++ M+PGM ++ V E+S+ +EA+I +
Sbjct: 322 QKLRKAEFDFNDFLDQMRQIKKMGGMNSILNMMPGMSQM-KGNVEIDERSMDKVEAIILS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT ER P LL +P R++R+A+ +G +V+++V Q Q + MK L
Sbjct: 381 MTKGERANPSLL--NPSRKQRIAKGAGVDIAEVNRIVKQFEQSKKLMKQL 428
>gi|375090633|ref|ZP_09736947.1| signal recognition particle protein [Facklamia languida CCUG 37842]
gi|374565394|gb|EHR36665.1| signal recognition particle protein [Facklamia languida CCUG 37842]
Length = 490
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 170/253 (67%), Gaps = 7/253 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK +K ++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAAL
Sbjct: 202 LMNELKQIKAAVHPDEILLTVDAMTGQDAVNVAQAFNDALDITGVIITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ + KPIK G+GE++ LEPF+PDRM+ RILGMGD+++ +EKAQ+ +E+A +M
Sbjct: 262 SIRSIIDKPIKFTGQGEQLNALEPFHPDRMSSRILGMGDMMTLIEKAQQDFDEEEAAKMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KI A+FDFNDF+ Q V +MG + +I MIPG+ K+ Q +K + + A+++
Sbjct: 322 DKIKDASFDFNDFIDQMDQVRKMGPLKDLIKMIPGINKVPGIQDFNIDDKDMNRIRAVVQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ER P+ +++S RR+R+A G+T +V+QL+ Q Q R N+M M G +
Sbjct: 382 SMTPYERTHPDEISQS--RRRRIASGCGQTLNEVNQLIKQFNQSR----NMMAQMSNGKM 435
Query: 240 PALSNLEDALKSE 252
++ + + ++ +
Sbjct: 436 SGMNKMMNQMQQQ 448
>gi|260886927|ref|ZP_05898190.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|330839284|ref|YP_004413864.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|260862989|gb|EEX77489.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|329747048|gb|AEC00405.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
Length = 456
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 159/224 (70%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K + P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMQELKDIKADVKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+
Sbjct: 261 SVKAVTGCPIKFVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
KK+ A+F +DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA
Sbjct: 321 KKLRKADFTLDDFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I++MTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 381 IIKSMTPKERADISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|227499935|ref|ZP_03930028.1| signal recognition particle protein Ffh [Anaerococcus tetradius
ATCC 35098]
gi|227218044|gb|EEI83317.1| signal recognition particle protein Ffh [Anaerococcus tetradius
ATCC 35098]
Length = 445
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 161/220 (73%), Gaps = 2/220 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP E+LLVVDAMTGQEA + TF+ + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKEAVNPDEILLVVDAMTGQEAVNVAKTFDDYLDITGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE++EDLEPF+PDRMA RILGMGDVLS +EKA++ + E+A+E++
Sbjct: 260 SIRQVVGKPIKFIGVGEKLEDLEPFHPDRMANRILGMGDVLSLIEKAEKQLSLENAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + +DF++Q + + MG + ++ MIPG+ V ++ +EA+I +
Sbjct: 320 RKMREQTYTLDDFMEQIQQIRNMGPLEDLLAMIPGVNSKMLKGVDIDDRGFVRIEALINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EE+EKPE++ +S R+ R+A+ SG +++++L+ Q
Sbjct: 380 MTKEEKEKPEIIGKS--RKDRIAKGSGVDVKELNKLLKQF 417
>gi|403386852|ref|ZP_10928909.1| signal recognition particle protein [Clostridium sp. JC122]
Length = 453
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 158/221 (71%), Gaps = 2/221 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELKD+K + P E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 201 LMNELKDIKENIVPNEILLVVDSMTGQDAVNVAESFNSQLDLTGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPIK VG GE+M DLE F+P+RM+ RILGMGD+LS +EKAQ + +E A+E+
Sbjct: 261 SIKAMTGKPIKYVGMGEKMSDLEIFHPERMSSRILGMGDMLSLIEKAQAAIDEEKAQELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
K++S F+F DFL + ++G + +++ M+PG ++ + + EK + +E++I
Sbjct: 321 NKMLSQEFNFEDFLDMLHQMKKLGPLGKIVEMLPGANSKELKDLDLSQGEKEMSKIESII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 219
+MT ER KP L+ SP R+KR+A +G T Q+V++L+
Sbjct: 381 NSMTLNERRKPSLITSSPSRKKRIANGAGTTIQEVNKLLKH 421
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 169/231 (73%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ + + PTE LLV DAMTGQEA + F+ + +TG ILTK+DGD+RGGAAL
Sbjct: 200 MMLELEHLTEEVEPTETLLVADAMTGQEAVNVAQEFHRRLNLTGLILTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V G PIK +G GER++ LEPFYPDR+A RILGMGDVL+ +E+AQ + ++++++++
Sbjct: 260 SIRSVVGVPIKFIGTGERIDALEPFYPDRLASRILGMGDVLTLIERAQTEITEDESKKLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+++ +F+ DFL+Q + + +MG +++++ MIPG+G+ Q V+ ++ K +EA+I
Sbjct: 320 EKVLTGSFNLEDFLRQLQQIKKMGPLTQLLEMIPGIGQALRQQDVQVSDDEYKHIEAIIY 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER +PE++ P RR+R+A SG ++ +V+QL+ Q QM+ M +L
Sbjct: 380 SMTPEERRRPEII--KPSRRRRIAMGSGTSQAEVNQLLTQFKQMQKMMADL 428
>gi|399889405|ref|ZP_10775282.1| signal recognition particle protein [Clostridium arbusti SL206]
Length = 449
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 167/235 (71%), Gaps = 2/235 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + P+E+LLVVD+MTGQ+A + +FN + ITG ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKSSIEPSEILLVVDSMTGQDAVNVSDSFNGALDITGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVL+ +EKAQ+ + +++A+E+
Sbjct: 261 SIRAMTGKPIKYVGLGEKMNDLEIFYPDRMASRILGMGDVLTLIEKAQDAIDEKEAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMI 178
+K+M+ +F D+L + + ++G + +++ M+PGM + + + E K E+MI
Sbjct: 321 EKMMNQGLNFEDYLSMMKQMKKLGPLGKLLEMVPGMNNKMLKGTDLSKVEDETKKAESMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT +ER+ P+L++ S R+KR+A SG + Q +++L+ + M+ +MK +
Sbjct: 381 YSMTLKERKNPQLISSSASRKKRIALGSGTSVQDINKLLKMMEVMKKQMKQFKNI 435
>gi|302386490|ref|YP_003822312.1| signal recognition particle protein [Clostridium saccharolyticum
WM1]
gi|302197118|gb|ADL04689.1| signal recognition particle protein [Clostridium saccharolyticum
WM1]
Length = 449
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 169/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K + + +LVVDAMTGQ+A + FN +IGI G I+TKLDGD+RGGAAL
Sbjct: 202 MMNELIEIKGTVEVHQTILVVDAMTGQDAVNVAGMFNDKIGIDGVIITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKP+ VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ + +E A+E+
Sbjct: 262 SIRAVTGKPVLYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAELQVDEEKAKELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A FD+NDFL Q + +MG M+ ++GM+PGMG++ + E+++ +EA+I +
Sbjct: 322 QKLRKAEFDYNDFLDQMSQIKKMGGMASILGMMPGMGQMKDMDLD--ERAMDRVEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MT +ER P+L+ + R++RVA+ +G +V+++V Q QM+ MK L G+M GG
Sbjct: 380 MTSKERLNPDLMKNAS-RKQRVAKGAGVDIGEVNRIVKQFDQMKKMMKQLPGMMGGG 435
>gi|381183946|ref|ZP_09892631.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
gi|380316157|gb|EIA19591.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
Length = 452
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 167/231 (72%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK+VK V NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMGELKEVKEVTNPAEILLVVDSMTGQDAVNVAESFNEQLGVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + QE EM+
Sbjct: 262 SIRAVTGKPIKFVGMGEKMEALETFHPDRMASRILGMGDVLSLIEKAQVDVDQEKMREME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL+Q V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 322 RKMKENSMTLDDFLEQLGQVKQMGPLDELLKMLPGAGKMKGLDNMQVDDKQLGHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 382 SMTKNEKDNPDIINAS--RRKRIARGSGRPIQEVNRLLKQFNEMKKMMKQM 430
>gi|334135560|ref|ZP_08509044.1| signal recognition particle protein [Paenibacillus sp. HGF7]
gi|333606896|gb|EGL18226.1| signal recognition particle protein [Paenibacillus sp. HGF7]
Length = 453
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 174/251 (69%), Gaps = 3/251 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK+V+ + P E LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKNVREAVGPHETLLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+M+ LEPFYP+RMA RILGMGD+L+ +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAAMGEKMDALEPFYPERMASRILGMGDMLTLIEKAQAGIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F+DFL+Q V ++G + +++ M+PG GK+ + ++ +K + +EA+++
Sbjct: 321 RKMRNAEFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKMKGMKDLKVDDKQMGRVEAIVK 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MT EE+ KPE++ + RRKR+A SG + Q V++L+ Q MR MK G+M ++
Sbjct: 381 SMTKEEKRKPEIINAN--RRKRIALGSGNSVQDVNRLLKQFEDMRKMMKQFSGMMNPKAM 438
Query: 240 PALSNLEDALK 250
+ L K
Sbjct: 439 KNMKKLGKGFK 449
>gi|268611752|ref|ZP_06145479.1| signal recognition particle protein [Ruminococcus flavefaciens
FD-1]
Length = 460
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 162/233 (69%), Gaps = 5/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K PTE++LVVDAMTGQ+A + F+ +GIT +++KLD D+RGGAAL
Sbjct: 200 LMDELVKIKEETQPTEIMLVVDAMTGQDAVNVAKAFDDAVGITSVLMSKLDSDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPIK VG GE+++D E F+P+RMA RILGMGDVL+ +EKA+ V+ Q+DAE++
Sbjct: 260 SVLAVTGKPIKFVGMGEKLDDFEQFHPERMASRILGMGDVLTLIEKAENVISQKDAEKLT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K FD +D L Q + + +MGSM +IGM+PG+G KI A + E++ L +EA+I
Sbjct: 320 QKFKENKFDMDDLLDQMKQIKKMGSMKSIIGMLPGVGDKIKDADIDESQ--LGRVEAIIT 377
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT ER KP ++ +P R+KR+A SG + V++L+ Q QM+ MK G
Sbjct: 378 SMTKAERAKPSII--NPSRKKRIAAGSGTKVEDVNRLLKQFDQMQSIMKKFTG 428
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLSN-NPQLKNLNVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPEERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|298386283|ref|ZP_06995839.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
gi|298260660|gb|EFI03528.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
Length = 440
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN+ + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNVRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|302389629|ref|YP_003825450.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
gi|302200257|gb|ADL07827.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 159/230 (69%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL ++K +NP E+LLVVD+MTGQ+A + TF+ ++ +TG ILTKLDGD+RGGAAL
Sbjct: 200 LMQELINIKDAVNPDEILLVVDSMTGQDAVNVAETFHNKLQLTGLILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK VG GE++ DLEPFYP+RMA RILGMGDVLS +EKA + Q A E++
Sbjct: 260 SIKAVTGCPIKFVGMGEKLTDLEPFYPERMASRILGMGDVLSLIEKATAAIDQNKARELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI F +DFL+Q + V +MGS+ +++ MIPG+ V EK L +EA+I +
Sbjct: 320 EKIRKEEFTLDDFLEQLKQVRKMGSLDQILSMIPGLSPQKLQGVEFNEKELVHIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER P ++ S RR+R+A SG + Q V++L+ Q Q + +K L
Sbjct: 380 MTKEERMNPSIINGS--RRRRIAMGSGTSVQDVNRLLKQFEQTKKMVKQL 427
>gi|423074815|ref|ZP_17063539.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
gi|361854318|gb|EHL06402.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
Length = 453
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMGELREIKVSVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM+
Sbjct: 259 SVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 378 MTAEERRKPALIKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 425
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + ++ M+PGM PA + K ++A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G+
Sbjct: 381 LSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGN 434
Query: 239 LPALSNL 245
+ + NL
Sbjct: 435 MSGMQNL 441
>gi|89895345|ref|YP_518832.1| hypothetical protein DSY2599 [Desulfitobacterium hafniense Y51]
gi|89334793|dbj|BAE84388.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 457
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAAL
Sbjct: 203 LMGELREIKVSVKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAAL 262
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM+
Sbjct: 263 SVKAVTGCPIKFAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREME 322
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +
Sbjct: 323 QKLRKQEFTLDDFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 382 MTAEERRKPALIKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 429
>gi|325269145|ref|ZP_08135765.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
gi|324988532|gb|EGC20495.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
Length = 453
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERSHPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|312869933|ref|ZP_07730072.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
gi|311094518|gb|EFQ52823.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
Length = 480
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + ++ M+PGM PA + K ++A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G+
Sbjct: 381 LSMTPEERENPDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGN 434
Query: 239 LPALSNL 245
+ + NL
Sbjct: 435 MSGMQNL 441
>gi|282881745|ref|ZP_06290408.1| signal recognition particle protein [Prevotella timonensis CRIS
5C-B1]
gi|281304504|gb|EFA96601.1| signal recognition particle protein [Prevotella timonensis CRIS
5C-B1]
Length = 444
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEISQLKNAIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ ++ F+PDRMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMDAIDVFHPDRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ + MIPG+GK + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLKQIEQIKKMGNIKDLAAMIPGVGKAIK-DIDIDNDAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNTS--RRQRIAKGSGTNVQEVNRLIKQFDQTRKMMKMVTG 428
>gi|126654295|ref|ZP_01726072.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
gi|126589259|gb|EAZ83420.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
Length = 438
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 167/237 (70%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD++ + P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIRALKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E++
Sbjct: 262 SIRSVTQKPIKFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K + F +DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I
Sbjct: 322 EKFKTQTFTLDDFVEQLQQVKKMGPIDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP E+ PEL+ S R+KR+++ SG + Q+V++L+ Q +M+ MK + G+ G
Sbjct: 382 SMTPAEKTNPELINGS--RKKRISKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASG 436
>gi|338980293|ref|ZP_08631582.1| Signal recognition particle protein [Acidiphilium sp. PM]
gi|338208802|gb|EGO96632.1| Signal recognition particle protein [Acidiphilium sp. PM]
Length = 462
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 167/231 (72%), Gaps = 6/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE+K ++ V P E LLVVDAMTGQ+A A T FN + ITG ++T+LDGD+RGGAAL
Sbjct: 207 LMDEVKAIRDVTAPAETLLVVDAMTGQDALATATAFNEAVSITGIVMTRLDGDARGGAAL 266
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIKL+G GE+++ LEPF+P+R+AGRILGMGD++S VEKA E + Q+ AE++
Sbjct: 267 SMRAVTGAPIKLMGMGEKLDALEPFHPERIAGRILGMGDIVSLVEKAAENVDQQKAEQLA 326
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AM 177
+K+ FD D+ +Q + + +MGS+S ++GM+PG+GKI Q+ EA+ I++ A+
Sbjct: 327 RKMARGKFDLEDYAEQLKQITKMGSLSGIMGMLPGVGKIKQ-QLAEADLDTSILKRQAAI 385
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
I +MT ER P+++ S R+KRVA SG + Q+V++L+ Q QM+ MK
Sbjct: 386 ISSMTKAERANPDIMKAS--RKKRVAAGSGTSVQEVNRLLKQFEQMKDMMK 434
>gi|421489046|ref|ZP_15936434.1| signal recognition particle protein [Streptococcus oralis SK304]
gi|400368263|gb|EJP21278.1| signal recognition particle protein [Streptococcus oralis SK304]
Length = 523
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 160/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN+++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNVQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM + Q ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANNSALQNMKVDERQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 382 SMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQGIM 431
>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
Length = 453
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K +NP E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAAL
Sbjct: 200 LMNELKNIKAEVNPNEILLVVDSMTGQDAVNVAKSFNETLEIDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKP+K G GE+++DLEPF+P+RMA RILGMGDVL+ +EKA E + +++A M
Sbjct: 260 SVLAVTGKPVKFAGIGEKLDDLEPFHPERMASRILGMGDVLTLIEKAGENVSEKEAARMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
KK+ FD ND L Q + + +MGS+ ++ +IPG+G KI A + E++ + +EA+I
Sbjct: 320 KKLKENKFDMNDLLDQMKQIQKMGSIKSILSIIPGVGEKIKDADIDESQ--MTRIEAIIT 377
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EREKP ++ +P R++R+A SG Q V++L+ Q M+ MK L
Sbjct: 378 SMTIAEREKPSII--NPSRKRRIAAGSGTQVQDVNRLLKQFEDMQKMMKQL 426
>gi|374708674|ref|ZP_09713108.1| signal recognition particle protein [Sporolactobacillus inulinus
CASD]
Length = 447
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 163/237 (68%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K V +P EV LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAAL
Sbjct: 202 LMNELEQIKEVSHPDEVFLVVDAMTGQDAVNVARAFNDRLDITGVIMTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +MQ
Sbjct: 262 SIRSVTGKPIKFVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQATIDEEKARDMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K++S +F +DFL+Q V MG + ++ M+PG K + ++ EK + EA+I
Sbjct: 322 QKLLSVSFTLDDFLEQIGQVRTMGPLEDLLAMMPGANKFKGMKNMQIDEKKIDQTEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+ +PE++ S R+KR+A SG + V++L+ Q M+ MK MG +G
Sbjct: 382 SMTSHEKTEPEIINAS--RKKRIALGSGTSVADVNRLLKQFKDMKKMMKQFMGKAKG 436
>gi|319646021|ref|ZP_08000251.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
gi|317391771|gb|EFV72568.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
Length = 451
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELEQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMKNMSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|385825645|ref|YP_005861987.1| signal recognition particle protein [Lactobacillus johnsonii DPC
6026]
gi|329667089|gb|AEB93037.1| signal recognition particle protein [Lactobacillus johnsonii DPC
6026]
Length = 476
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ L+NL
Sbjct: 434 MGELANL 440
>gi|212695490|ref|ZP_03303618.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM
7454]
gi|325846141|ref|ZP_08169235.1| signal recognition particle protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|212677490|gb|EEB37097.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM
7454]
gi|325481734|gb|EGC84769.1| signal recognition particle protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 445
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 164/228 (71%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ + P E+LLVVDAM GQE+ + TF+ + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKKAVKPDEILLVVDAMVGQESVNVAKTFDDYLDITGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE+++DLE F+PDRMA RILGMGDVLS +EKA++ + +DA+E++
Sbjct: 260 SIRQVVGKPIKFIGTGEKLDDLEAFHPDRMASRILGMGDVLSLIEKAEKQVSLKDAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + + +DF++Q + MG + ++ MIPG+ V EK +EA+I +
Sbjct: 320 EKMRNQTYTLDDFIEQINQIRNMGPLEDLLSMIPGVNNKMLKNVNVDEKGFVRIEALISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT EEREKPE++ +S R++R+A+ SG ++++L+ Q +++ MK
Sbjct: 380 MTKEEREKPEIIGKS--RKERIAKGSGVDMNELNKLLKQFKELKKMMK 425
>gi|152976211|ref|YP_001375728.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
gi|152024963|gb|ABS22733.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
Length = 449
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 168/234 (71%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVANPDEIFLVVDAMTGQDAVNVAKSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V ++G + ++GM+PG KI + + +K + +EA+I
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAKVDDKQIGHIEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK L G+
Sbjct: 382 SMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTLTGM 433
>gi|313673954|ref|YP_004052065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940710|gb|ADR19902.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
Length = 448
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 155/230 (67%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK +K +NP E+L V DAM GQ+A + FN IGITG I TKLDGD+RGGAAL
Sbjct: 200 LMKELKSIKNAVNPDEILFVADAMIGQDAVNVAKQFNEAIGITGVIFTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ EV+G PIK VG GE+++ E F+PDRMA RILGMGDV++ VE AQE + E+A+EM
Sbjct: 260 SIMEVTGVPIKFVGIGEKLDAFELFHPDRMASRILGMGDVVTLVEMAQEAIDAEEAKEMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ DFND L+Q R + +MGS+ ++ +IPG+ + V +K K +EA+I +
Sbjct: 320 TKVGKTGLDFNDLLQQFRMIKKMGSLESIMKLIPGLSAMPDLNVD--DKQFKRIEAIIYS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTPEER+K ++ S R+KR+A+ SG T V++L+ QL QM +K
Sbjct: 378 MTPEERKKAHIINGS--RKKRIAKGSGTTVNDVNKLIMQLEQMNKMLKKF 425
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V +P +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++AE++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAEKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + + +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLQQIQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG+ +V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPEERENPDML--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----DMMSKMSKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|332880672|ref|ZP_08448345.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045958|ref|ZP_09107588.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
gi|332681306|gb|EGJ54230.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355530964|gb|EHH00367.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
Length = 450
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 155/232 (66%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMQEIAAIKHGINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIAKNQFDFNDFMSQIQQIKKMGNLKDLASMIPGVGK-ALKDVEIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPRERTNPEILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|347750524|ref|YP_004858089.1| signal recognition particle protein [Bacillus coagulans 36D1]
gi|347583042|gb|AEO99308.1| signal recognition particle protein [Bacillus coagulans 36D1]
Length = 447
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 172/238 (72%), Gaps = 3/238 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K + +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMNELKEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++
Sbjct: 262 SIRAVTEKPIKFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ +F +DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I+
Sbjct: 322 KKMRDQSFTLDDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MT +E+ +P+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 382 SMTKQEKIRPDIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|359404602|ref|ZP_09197435.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
gi|357560144|gb|EHJ41545.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
Length = 450
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIETLKNAINPNETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLAAMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L +S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNQS--RRMRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|256820615|ref|YP_003141894.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|315223725|ref|ZP_07865575.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|420158534|ref|ZP_14665351.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
gi|256582198|gb|ACU93333.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|314946300|gb|EFS98299.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|394763650|gb|EJF45731.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
Length = 442
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|393779012|ref|ZP_10367268.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|420150558|ref|ZP_14657715.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429746642|ref|ZP_19279981.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429756689|ref|ZP_19289274.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|392611092|gb|EIW93845.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|394751650|gb|EJF35395.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429165764|gb|EKY07800.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429170816|gb|EKY12477.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 443
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERNTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|310658884|ref|YP_003936605.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
gi|308825662|emb|CBH21700.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
Length = 448
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K + P E++LVVD+MTGQ+A + +F+ +GI G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKSSIKPHEIMLVVDSMTGQDAVNIAESFDQTLGIDGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++ KPIK GE++EDLE FYPDRMA RILGMGDV+S +EKAQ ++ A+EMQ
Sbjct: 261 SIKAITKKPIKYAAVGEKLEDLEQFYPDRMASRILGMGDVMSLIEKAQSAFDEDKAKEMQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
K+ SA+F F+DFL Q + + +MG + ++ MIPGM ++ + V +K L +EA+I+
Sbjct: 321 AKMKSADFTFDDFLDQMQQIKKMGPLKNLLEMIPGMSQMKQLKDVDIDDKELVKIEAIIQ 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER+ P ++ S R+KR+A SG QV++L+ Q + + MK
Sbjct: 381 SMTKKERQNPSIINAS--RKKRIAMGSGTHVSQVNRLLKQFEESKKMMKQF 429
>gi|227890253|ref|ZP_04008058.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus johnsonii
ATCC 33200]
gi|268319235|ref|YP_003292891.1| signal recognition particle protein [Lactobacillus johnsonii
FI9785]
gi|227849067|gb|EEJ59153.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus johnsonii
ATCC 33200]
gi|262397610|emb|CAX66624.1| signal recognition particle protein [Lactobacillus johnsonii
FI9785]
Length = 476
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ L+NL
Sbjct: 434 MGELANL 440
>gi|282877590|ref|ZP_06286405.1| signal recognition particle protein [Prevotella buccalis ATCC
35310]
gi|281300162|gb|EFA92516.1| signal recognition particle protein [Prevotella buccalis ATCC
35310]
Length = 445
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K ++P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMDEIARLKDAVHPDETLFVVDAMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V S K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLNQIEQIKKMGNIKDLAAMIPGVGKAIK-DVDIDNDSFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNTS--RRQRIAKGSGTDIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|407977615|ref|ZP_11158452.1| signal recognition particle protein [Bacillus sp. HYC-10]
gi|407415868|gb|EKF37449.1| signal recognition particle protein [Bacillus sp. HYC-10]
Length = 446
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMGELQKVKEVANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E++
Sbjct: 262 SIRAVTNTPIKFAALGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|42519388|ref|NP_965318.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
gi|41583676|gb|AAS09284.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
Length = 476
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ L+NL
Sbjct: 434 MGELANL 440
>gi|52080200|ref|YP_078991.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404489088|ref|YP_006713194.1| signal recognition particle protein [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682141|ref|ZP_17656980.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
gi|52003411|gb|AAU23353.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52348079|gb|AAU40713.1| signal recognition particle protein Ffh [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|383438915|gb|EID46690.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
Length = 446
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELEQVKETAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMKNMSFTLDDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT +E+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTGKEKEQPEIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|385260553|ref|ZP_10038697.1| signal recognition particle protein [Streptococcus sp. SK140]
gi|385191103|gb|EIF38527.1| signal recognition particle protein [Streptococcus sp. SK140]
Length = 521
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417837347|ref|ZP_12483586.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
gi|338762542|gb|EGP13810.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
Length = 476
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ L+NL
Sbjct: 434 MGELANL 440
>gi|284039605|ref|YP_003389535.1| signal recognition particle protein [Spirosoma linguale DSM 74]
gi|283818898|gb|ADB40736.1| signal recognition particle protein [Spirosoma linguale DSM 74]
Length = 439
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 161/239 (67%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +KR + P+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMQEIEALKRAIAPSETLFVVDSMTGQDAVNTAKTFNERLNFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIKTVVNKPIKFISTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ FDF+DFL Q + + +MG++ ++GMIPGMGK+ + S K +EA+I +
Sbjct: 319 AKMRKNQFDFDDFLSQLQQIKKMGNVKDLLGMIPGMGKMIK-DLDIDNDSFKPIEAIISS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MTP+ER +P+++ S R+KR+A SG + QV+ L+ Q +MR MK + + G L
Sbjct: 378 MTPKERSRPDIIDGS--RKKRIATGSGTSITQVNNLLKQFDEMRKMMKKMNTMQSSGKL 434
>gi|194014310|ref|ZP_03052927.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
gi|194013336|gb|EDW22901.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
Length = 446
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK V +P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELQKVKEVASPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E++
Sbjct: 262 SIRAVTNTPIKFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EE+E+PE++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTTEEKEQPEVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|390630509|ref|ZP_10258490.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
gi|390484245|emb|CCF30838.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
Length = 487
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/226 (50%), Positives = 157/226 (69%), Gaps = 5/226 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAMTGQ A FN + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADVKEIANPDEILLVVDAMTGQNAVETAEGFNERLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E
Sbjct: 262 SIRAVTGKPIKFVGQGEKMADLDVFYPDRMASRILGMGDLLTLIEKAQKDFDEKQAAETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ S FDFNDF+ Q V MG + ++ MIPGM P A V+ K + ++A++
Sbjct: 322 EKMKSNTFDFNDFIAQMDQVQNMGPIEDLLKMIPGMAN-NPALANVKVDPKDMAHIKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MTP ERE P+LL +P RR+R+A +G+ +V++L+ Q +M+
Sbjct: 381 MSMTPAERENPDLL--NPSRRRRLAAGAGRPVVEVNRLIKQFNEMK 424
>gi|160880541|ref|YP_001559509.1| signal recognition particle protein [Clostridium phytofermentans
ISDg]
gi|160429207|gb|ABX42770.1| signal recognition particle protein [Clostridium phytofermentans
ISDg]
Length = 454
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 166/243 (68%), Gaps = 9/243 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K ++ V+L VDAMTGQ+A + TFN +IGITG ILTKLDGD+RGGAAL
Sbjct: 202 MMDELIEIKENIHIDHVILTVDAMTGQDAVNVAETFNEKIGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI +G GE++ DLE FYPDRMA RILGMGDVL+ ++K Q + ++ A+E++
Sbjct: 262 SIRAVTGKPILYIGMGEKLSDLEQFYPDRMASRILGMGDVLTLIDKVQAEIDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVR-------EAEKSLKI 173
+KI A FDFND+L Q + + +MG + +++ M+PG ++ E E +LK
Sbjct: 322 RKIKKAEFDFNDYLDQMQQMKKMGGIQKLVEMLPGGMGGMGSKANMKDIDWDEGENALKG 381
Query: 174 MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+EA+I +MT EER P+LL +P R+KR+A +G +V+++V Q + R MK G+
Sbjct: 382 IEAIIYSMTKEERRNPDLL--NPSRKKRIADGAGVDISEVNRVVKQFGETRKMMKQFSGM 439
Query: 234 MEG 236
+ G
Sbjct: 440 LGG 442
>gi|402313180|ref|ZP_10832101.1| signal recognition particle protein [Lachnospiraceae bacterium
ICM7]
gi|400366940|gb|EJP19960.1| signal recognition particle protein [Lachnospiraceae bacterium
ICM7]
Length = 451
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 166/238 (69%), Gaps = 5/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K + +++LVVDAMTGQ+A + TFN ++ ITG ILTKLDGD+RGGAAL
Sbjct: 202 MMNELIEIKENVTVDDIILVVDAMTGQDAVNVAETFNEKLDITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ M E A+++
Sbjct: 262 SVRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEMDMDSEKAKKLS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI-MEAMIE 179
+KI A+FDFNDFL Q + +MG M+ ++ M+PG+G A + E + S I ++A+I+
Sbjct: 322 QKIAKADFDFNDFLDQLEQLEKMGGMASILSMLPGIG--GKAALPEVDDSQMIKIKAIIQ 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+M+ +ER P LL +P R+ R+A+ SG V++LV Q QM+ MK G+M+
Sbjct: 380 SMSEKERLDPSLL--NPSRKNRIAKGSGVNIADVNRLVKQFEQMKKMMKQFPGMMKNN 435
>gi|429741355|ref|ZP_19275017.1| signal recognition particle protein [Porphyromonas catoniae F0037]
gi|429159004|gb|EKY01528.1| signal recognition particle protein [Porphyromonas catoniae F0037]
Length = 447
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 163/245 (66%), Gaps = 4/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ VK + P+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMHEIQAVKEAIRPSETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQ++ +++A ++
Sbjct: 260 SIRTVVDKPIKFVGMGEKMDALDVFHPERMADRILGMGDIVSLVERAQQLYDEQEARRLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
++I FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 ERIAKDQFDFNDFLTQIHQIKKMGNIKDLAAMIPGVGK-ALKDIDINDDAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER KP +L RRKR+A SG T Q V++L+ Q Q R MK L G +GG +P
Sbjct: 379 MTPEERAKPHILDGH--RRKRIALGSGTTVQDVNKLLTQFTQTRKMMKTLQG-FKGGKMP 435
Query: 241 ALSNL 245
+ ++
Sbjct: 436 KIPSM 440
>gi|340349536|ref|ZP_08672547.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
gi|339611074|gb|EGQ15913.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
Length = 450
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K ++P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKEHVSPDEILFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMDALDVFHPTRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKILKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +
Sbjct: 379 MTPKERTSPEVLNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMG 436
Query: 241 ALSNL 245
+ N+
Sbjct: 437 KMKNM 441
>gi|256545499|ref|ZP_05472861.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
51170]
gi|256398895|gb|EEU12510.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
51170]
Length = 445
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 165/228 (72%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K+ + P E+LLVVDAM GQE+ + TF+ + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKNIKKAVKPDEILLVVDAMVGQESVNVAKTFDEYLDITGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE+++DLE F+PDRMA RILGMGDVLS +EKA++ + +DA+E++
Sbjct: 260 SIRQVVGKPIKFIGTGEKLDDLEAFHPDRMASRILGMGDVLSLIEKAEKQVTLKDAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + ++ +DF++Q + MG + ++ MIPG+ V EK +EA+I +
Sbjct: 320 EKMRNQSYTLDDFVEQINQIRNMGPLEDLLAMIPGVNNKMLKNVNVDEKGFVRIEALISS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT EEREKPE++ +S R++R+A+ SG ++++L+ Q +++ MK
Sbjct: 380 MTKEEREKPEIIGKS--RKERIAKGSGVDMNELNKLLKQFKELKKMMK 425
>gi|160886334|ref|ZP_02067337.1| hypothetical protein BACOVA_04343 [Bacteroides ovatus ATCC 8483]
gi|299146818|ref|ZP_07039886.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|336414589|ref|ZP_08594935.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|423289502|ref|ZP_17268352.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
gi|423297356|ref|ZP_17275417.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|156108219|gb|EDO09964.1| signal recognition particle protein [Bacteroides ovatus ATCC 8483]
gi|298517309|gb|EFI41190.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|335933701|gb|EGM95703.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|392666997|gb|EIY60508.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|392667213|gb|EIY60723.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
Length = 440
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|322391775|ref|ZP_08065240.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
gi|321145255|gb|EFX40651.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
Length = 521
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKAFEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|449982402|ref|ZP_21818256.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|450004868|ref|ZP_21826331.1| signal recognition particle protein [Streptococcus mutans NMT4863]
gi|449174874|gb|EMB77332.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|449189437|gb|EMB91104.1| signal recognition particle protein [Streptococcus mutans NMT4863]
Length = 516
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|313205775|ref|YP_004044952.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485092|ref|YP_005394004.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386322241|ref|YP_006018403.1| hypothetical protein RIA_2012 [Riemerella anatipestifer RA-GD]
gi|407452570|ref|YP_006724295.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|416111226|ref|ZP_11592483.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|442315048|ref|YP_007356351.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
gi|312445091|gb|ADQ81446.1| signal recognition particle subunit FFH/SRP54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022827|gb|EFT35851.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|325336784|gb|ADZ13058.1| Ffh [Riemerella anatipestifer RA-GD]
gi|380459777|gb|AFD55461.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403313554|gb|AFR36395.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|441483971|gb|AGC40657.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
Length = 454
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 155/220 (70%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+K V + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIKSVHYFIKPTETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++Q
Sbjct: 260 TIRSVVNKPIKFISTGEKMEALDLFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + + +MG+M ++GM+PG+GK V + S K +EA+I +
Sbjct: 320 KKIAKNEFGFDDFLKQIQQIKKMGNMKDLLGMLPGVGKAIK-DVDIDDNSFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER +P ++ + R+KR+A+ SG+ ++V+QL+ Q
Sbjct: 379 MTPEERRRPSIIDVN--RKKRIAKGSGRKLEEVNQLMKQF 416
>gi|120437132|ref|YP_862818.1| signal recognition particle protein [Gramella forsetii KT0803]
gi|117579282|emb|CAL67751.1| signal recognition particle protein [Gramella forsetii KT0803]
Length = 442
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P E L VVD+MTGQ+A TFN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHEAIQPQETLFVVDSMTGQDAVNTAKTFNERLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDIFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK+ V + + K +EA+I +
Sbjct: 320 KKIAKNAFGFDDFLNQLQQIKKMGSMKDLMGMIPGAGKMLK-DVDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER +P+++ S R+KR+A+ SG T Q+V+QL+ Q
Sbjct: 379 MTPEERSEPKVINAS--RKKRIAKGSGTTVQEVNQLLKQF 416
>gi|422346384|ref|ZP_16427298.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
gi|373225929|gb|EHP48256.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
Length = 452
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDVK V NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAAL
Sbjct: 201 LMQELKDVKEVSNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++ KPIK VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++
Sbjct: 261 SIRDITSKPIKFVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLS 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+++ F+F+D+L + ++G ++++I MIPG+ ++ + EK + ++A+I
Sbjct: 321 EKMLNQEFNFDDYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
++MT +ER++P L+ + R++R+A+ SG T Q+V++++
Sbjct: 381 QSMTAKERKQPSLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|450132637|ref|ZP_21870177.1| signal recognition particle protein [Streptococcus mutans NLML8]
gi|449152802|gb|EMB56500.1| signal recognition particle protein [Streptococcus mutans NLML8]
Length = 516
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 164/239 (68%), Gaps = 10/239 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAM 177
+K+ +FDFNDF++Q V MG M ++ MIPGM ++ +V E E + K A+
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEGEIARK--RAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+ +MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 380 VSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|334128353|ref|ZP_08502246.1| signal recognition particle protein [Centipeda periodontii DSM
2778]
gi|333387774|gb|EGK58967.1| signal recognition particle protein [Centipeda periodontii DSM
2778]
Length = 455
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 161/228 (70%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA ++ +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVKPHEILLVVDAMTGQEAVSVAQSFDESLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
K+ +F +DFL Q + V ++GS+S ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 AKLRKNDFTLDDFLDQLQQVKKLGSLSSILGMIPGMGNLKKKLGDQEFDLDGKEMRQLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|450071676|ref|ZP_21848262.1| signal recognition particle protein [Streptococcus mutans M2A]
gi|449212110|gb|EMC12488.1| signal recognition particle protein [Streptococcus mutans M2A]
Length = 516
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|299142906|ref|ZP_07036033.1| signal recognition particle protein [Prevotella oris C735]
gi|298575635|gb|EFI47514.1| signal recognition particle protein [Prevotella oris C735]
Length = 449
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 166/253 (65%), Gaps = 11/253 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEIANLKNALHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDAFHPMRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MTP+ER PELL S RR+R+A+ SG + Q+V++L+ Q Q R MK +M
Sbjct: 379 MTPKERTSPELLNTS--RRQRIAKGSGTSIQEVNKLIKQFDQTRKMMKMVTGNQMAGMMS 436
Query: 233 VMEGGSLPALSNL 245
M+G ++P + L
Sbjct: 437 RMKGMNIPGMPKL 449
>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
Length = 447
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K +NP E+L V DAMTGQ+A + TFN + ITG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELKNIKEAINPDEILFVADAMTGQDAVNVAKTFNEMLDITGVILTKLDGDARGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++EV+GKP+K VG GE+++ EPFYPDRMA RILGMGD+++ VE AQ+ +++++AE++
Sbjct: 262 SIREVTGKPLKFVGTGEKLDAFEPFYPDRMASRILGMGDIVTLVEMAQDAIEEDEAEKLA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI DFND L+Q + + +MGS ++ ++PG + V E+ + K +EA+I +
Sbjct: 322 TKIQKKGLDFNDMLQQMKMIKKMGSFESILKLLPGFSGLGNIDVDES--NFKRIEAIINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER ++L S R++R+A+ SG + +V++L+ QL
Sbjct: 380 MTPLERTNYKILNAS--RKRRIAKGSGTSVSEVNKLIQQL 417
>gi|315639588|ref|ZP_07894728.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
gi|315484549|gb|EFU75005.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
Length = 472
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMEELKQIKELAQPNEILLVVDAMTGQDAVTVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRSVTGAPIKFTGTGEKLTDLEIFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
KK+ +FDFNDF++Q V MG + ++ MIPGM ++ + + K + +A++
Sbjct: 322 KKMKENSFDFNDFIEQLDQVMSMGPLEDLMKMIPGMSQVPGMDNFKVDPKDIARKKAIVF 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEERE P+LL +P RR+R+A SG +V++++ Q + R M+ +
Sbjct: 382 SMTPEERENPDLL--NPSRRRRIAAGSGNNVVEVNRMIKQFKEARTMMQKM 430
>gi|357042601|ref|ZP_09104305.1| signal recognition particle protein [Prevotella histicola F0411]
gi|355369252|gb|EHG16650.1| signal recognition particle protein [Prevotella histicola F0411]
Length = 447
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|322387559|ref|ZP_08061168.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|419843114|ref|ZP_14366438.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|321141426|gb|EFX36922.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|385703216|gb|EIG40342.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
Length = 521
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKTLAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGIILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|114567018|ref|YP_754172.1| signal recognition particle protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337953|gb|ABI68801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 448
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K +NP E+LLVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKQIKSAINPHEILLVVDAMTGQDAVNVAESFNRDLGLTGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE+++ LE F+PDRMA RILGMGD+LS VEKAQ + QE A EM+
Sbjct: 260 SVKAVTGCPIKYVGMGEKLDALETFFPDRMASRILGMGDILSLVEKAQANIDQEKAREME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
+KI F DFL+Q + V MG + ++GMIPG+GK E E+ + +EA+I+
Sbjct: 320 RKIRKQEFTLEDFLEQMQQVRSMGPLDELLGMIPGIGKQMKGFKGEFDEREILRIEAIIK 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER ++ S R+KR+A+ SG Q+V++L+ Q + R MK
Sbjct: 380 SMTLQERRDTSIINGS--RKKRIARGSGTKVQEVNRLLKQFEESRKLMKQF 428
>gi|450124877|ref|ZP_21867296.1| signal recognition particle protein [Streptococcus mutans U2A]
gi|449233422|gb|EMC32498.1| signal recognition particle protein [Streptococcus mutans U2A]
Length = 516
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|237723193|ref|ZP_04553674.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372708|ref|ZP_06619090.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
gi|229447715|gb|EEO53506.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632517|gb|EFF51113.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
Length = 440
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|374337948|ref|YP_005094657.1| Signal recognition particle subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
gi|372284057|emb|CCF02297.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
Length = 521
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ +TG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDVTGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|450175644|ref|ZP_21885302.1| signal recognition particle protein [Streptococcus mutans SM1]
gi|449246445|gb|EMC44749.1| signal recognition particle protein [Streptococcus mutans SM1]
Length = 516
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|332981635|ref|YP_004463076.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
gi|332699313|gb|AEE96254.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
Length = 438
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 165/237 (69%), Gaps = 2/237 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+D+K ++P E+LLVVDAMTGQ+A + FN + I G +LTKLDGD+RGGAAL
Sbjct: 195 MMQELEDIKSSVHPDEILLVVDAMTGQDAVNVAKNFNERLAIDGVVLTKLDGDTRGGAAL 254
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK VG GE+++DLEPF+PDR+A RILGMGDVL+ +EKAQ + ++ A E++
Sbjct: 255 SVKAVTGKPIKFVGMGEKLDDLEPFHPDRIASRILGMGDVLTLIEKAQAAVDEKKAMELE 314
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ + F DFL Q + +MG +S+++ M+PG+ +++ +K L +EA+I +
Sbjct: 315 NKLRNQQFTLEDFLDQLHEIKKMGPLSQIMDMLPGINAKKMGKIQVDDKELGRIEAIINS 374
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MT +ER +P ++ S RR+R+A+ SG T Q+V++L+ Q + + M+ + + G
Sbjct: 375 MTKQERREPAIINGS--RRRRIAKGSGTTIQEVNRLLKQFEETKRLMRQFTSMEKSG 429
>gi|239624000|ref|ZP_04667031.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522031|gb|EEQ61897.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 458
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 164/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K ++ + +LVVDAMTGQ+A + +FN ++GI G ILTKLDGD+RGGAAL
Sbjct: 202 MMEELIEIKSNVDVHQTILVVDAMTGQDAVNVSGSFNDKVGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A E+
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQARELS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ A FD+NDFL Q + + +MG M ++ M+PGMG +++ + E EKS+ +E++I
Sbjct: 322 QKLRKAEFDYNDFLTQMQQIKKMGGMGSILSMMPGMGSQLSGVDMDEGEKSMHRVESIIL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EER P L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 382 SMTKEERANPNLM--NPSRKQRIARGAGVEISEVNRLVKQFDQMKKMMKQM 430
>gi|409387404|ref|ZP_11239634.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
gi|399205505|emb|CCK20549.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
Length = 506
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 160/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + PTE+LLVVDAMTGQ AA + FN + ITG I+TKLDGD+RGGAAL
Sbjct: 202 LMNELVQIKDLAQPTEILLVVDAMTGQVAADVAKKFNETLEITGVIITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK VG GE++ DLE FYPDRM+ RILGMGD+L+ +EKAQ + + +M
Sbjct: 262 SIREITGKPIKFVGTGEKLTDLEVFYPDRMSSRILGMGDMLTLIEKAQSQFDEAQSAKMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM +I A ++ EK + A +
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQSMGPLDEIMKMIPGMSEIPGAANIKVDEKDIARKRAAVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTPEER P++L +P RR+R+A SG T +V++L+ Q + + M LM
Sbjct: 382 SMTPEERANPDIL--TPSRRRRIAAGSGNTFIEVNKLIKQFNESKKMMSGLM 431
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 164/236 (69%), Gaps = 6/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELKD+K +NP E+LLVVDAMTGQ+A + +FN +GITG I+TKLDGD+RGGA L
Sbjct: 201 LMNELKDMKTAVNPDEILLVVDAMTGQDAVTVADSFNKALGITGLIVTKLDGDARGGAVL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A++M
Sbjct: 261 SVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
+ + F + FL Q + V ++GS+ ++ MIPGMGK Q+ + K ++ +EA+
Sbjct: 321 ESLKKNEFTLDMFLDQMKQVKKLGSLESILSMIPGMGKFAK-QLEGVDLDGKEVRRLEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 380 IYSMTPQERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|390944827|ref|YP_006408588.1| signal recognition particle subunit FFH/SRP54 (srp54) [Belliella
baltica DSM 15883]
gi|390418255|gb|AFL85833.1| signal recognition particle subunit FFH/SRP54 (srp54) [Belliella
baltica DSM 15883]
Length = 445
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 166/245 (67%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVDAMTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMKEIEALKKALNPSETLFVVDAMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+L+ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENLDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK + + S + +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQLEQIKKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFRPIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP ERE P+++ S RRKR+A SG+T +V+ L+ Q MR MK + + GG+
Sbjct: 378 MTPLERENPDVIDGS--RRKRIATGSGRTITEVNNLMKQFGDMRKLMKQMNKM--GGAQK 433
Query: 241 ALSNL 245
AL N+
Sbjct: 434 ALGNI 438
>gi|317129234|ref|YP_004095516.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
gi|315474182|gb|ADU30785.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
Length = 449
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 169/234 (72%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + +P E+LLVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMGELEEIKALTSPDEILLVVDAMTGQDAVNVAESFNERLGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + ++ A E++
Sbjct: 262 SIRSVTDTPIKFAGMGEKVDALEPFHPDRMASRILGMGDVLTLIEKAQTNVDEKKARELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK++S + F+DFL+Q V MG + ++ M+PG GK+ + ++ +K L +EA+++
Sbjct: 322 KKMLSNDITFDDFLEQLNQVKSMGPLDEILSMMPGAGKMKGLKNIQVDDKQLGHIEAIVQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT E+E P +L S RR+R+A+ SG + Q+V++L+ Q +M+ MK + G+
Sbjct: 382 SMTKAEKEDPSILNAS--RRRRIAKGSGTSIQEVNRLIKQFGEMKKMMKQMAGM 433
>gi|262409622|ref|ZP_06086162.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|294643466|ref|ZP_06721279.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294807908|ref|ZP_06766689.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|298484340|ref|ZP_07002501.1| signal recognition particle protein [Bacteroides sp. D22]
gi|336405957|ref|ZP_08586623.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|345509533|ref|ZP_08789129.1| signal recognition particle protein [Bacteroides sp. D1]
gi|383113535|ref|ZP_09934307.1| signal recognition particle protein [Bacteroides sp. D2]
gi|423216105|ref|ZP_17202631.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
gi|229447054|gb|EEO52845.1| signal recognition particle protein [Bacteroides sp. D1]
gi|262352475|gb|EEZ01575.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|292641185|gb|EFF59390.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294444906|gb|EFG13592.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|295087957|emb|CBK69480.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
xylanisolvens XB1A]
gi|298269494|gb|EFI11094.1| signal recognition particle protein [Bacteroides sp. D22]
gi|313695700|gb|EFS32535.1| signal recognition particle protein [Bacteroides sp. D2]
gi|335936211|gb|EGM98149.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|392691151|gb|EIY84401.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
Length = 440
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|352516955|ref|YP_004886272.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
gi|348601062|dbj|BAK94108.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
Length = 475
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+D+K + P E+LLVVDAMTGQ+A + +FN ++GI+G ++TKLDGD+RGGAAL
Sbjct: 202 LMEELQDIKDIAQPNEILLVVDAMTGQDAVNVAESFNEQLGISGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRSVTGAPIKFTGIGEKLTDMEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEQRAEEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q ++ MGSM ++ MIPGM ++ V+ K ++ +AM+
Sbjct: 322 EKMRENTFDFNDFIEQMDQLSNMGSMEDIMKMIPGMNQMPGIDNVQFDPKDMERKKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAEREDPDLL--NPSRRRRIAAGSGNSVIEVNRMIKQFKESRKMMQQM 430
>gi|417935776|ref|ZP_12579093.1| signal recognition particle protein [Streptococcus infantis X]
gi|343402685|gb|EGV15190.1| signal recognition particle protein [Streptococcus infantis X]
Length = 476
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 157 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 216
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 217 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMA 276
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 277 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 335
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 336 SSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 388
>gi|429749336|ref|ZP_19282465.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429168518|gb|EKY10348.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 442
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMNEISNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+ME ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMEAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|372222922|ref|ZP_09501343.1| signal recognition particle protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 442
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ ++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMDEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEQARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MG+M ++GMIPGMGK + + + K +EA+I +
Sbjct: 320 KKIAKNKFGFDDFLSQIQQIKKMGNMKDLMGMIPGMGKALKG-IDIDDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P L S R+KR+A SG++ Q V+QL+ Q
Sbjct: 379 MTPDERANPNKLNSS--RKKRIAAGSGRSVQDVNQLLKQF 416
>gi|319901661|ref|YP_004161389.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
gi|319416692|gb|ADV43803.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
Length = 440
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ ++P E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAIDPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPEILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|422344100|ref|ZP_16425027.1| signal recognition particle protein [Selenomonas noxia F0398]
gi|355377848|gb|EHG25057.1| signal recognition particle protein [Selenomonas noxia F0398]
Length = 458
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 162/228 (71%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLGLDGIIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPLKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL Q + V ++GS+S ++GMIPGMG K+ ++ K ++ +EA
Sbjct: 320 EKLRRNDFTLDDFLDQMQQVKKLGSLSNILGMIPGMGGLKKKLGDQEIDLDGKEMRRIEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERTDITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|450088635|ref|ZP_21854871.1| signal recognition particle protein [Streptococcus mutans NV1996]
gi|449216367|gb|EMC16492.1| signal recognition particle protein [Streptococcus mutans NV1996]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449902748|ref|ZP_21791679.1| signal recognition particle protein [Streptococcus mutans M230]
gi|449975087|ref|ZP_21815612.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|450100286|ref|ZP_21858716.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|450122380|ref|ZP_21866721.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|450169747|ref|ZP_21883158.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449177352|gb|EMB79655.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|449220516|gb|EMC20380.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|449227957|gb|EMC27347.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|449246900|gb|EMC45195.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449262039|gb|EMC59496.1| signal recognition particle protein [Streptococcus mutans M230]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|238852592|ref|ZP_04643002.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
gi|238834738|gb|EEQ26965.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
Length = 476
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHLKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ +NL
Sbjct: 434 MGEFANL 440
>gi|254443810|ref|ZP_05057286.1| signal recognition particle protein [Verrucomicrobiae bacterium
DG1235]
gi|198258118|gb|EDY82426.1| signal recognition particle protein [Verrucomicrobiae bacterium
DG1235]
Length = 471
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 160/221 (72%), Gaps = 4/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+++E+K++KR + P EVLLVVD GQEA + TFN + +TG ++TKLDGD+RGGAAL
Sbjct: 198 LIEEIKELKRRVQPDEVLLVVDGAIGQEAVNVAKTFNEAVQLTGIVMTKLDGDARGGAAL 257
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KE++ PIK G GE+++D + FYPDRMA RILGMGDV+S VEKAQE + ++DA M
Sbjct: 258 SMKEITEVPIKFAGTGEKLDDFDVFYPDRMASRILGMGDVVSLVEKAQETIDEKDAANMA 317
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE--AEKSLKIMEAMI 178
+++M+ +F+F D LKQ R + ++GSMS ++GM+PGMGK+ + AE +K EA+I
Sbjct: 318 ERMMAGDFNFEDMLKQFRQIKKLGSMSSIMGMLPGMGKMAGNMNMDDKAEGQMKRSEAII 377
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 219
+MT ER+KP+LL S RR R+A+ SG +V+QL+ Q
Sbjct: 378 LSMTKVERQKPQLLNSS--RRTRIARGSGTKLAEVNQLIKQ 416
>gi|449960337|ref|ZP_21810595.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|450137749|ref|ZP_21871799.1| signal recognition particle protein [Streptococcus mutans NLML1]
gi|449167693|gb|EMB70560.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|449234787|gb|EMC33774.1| signal recognition particle protein [Streptococcus mutans NLML1]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|430750342|ref|YP_007213250.1| signal recognition particle protein [Thermobacillus composti KWC4]
gi|430734307|gb|AGA58252.1| signal recognition particle protein [Thermobacillus composti KWC4]
Length = 464
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ + + P EVLLVVDAM GQEA + +F+ ++ +TG +LTKLDGD+RGGAA+
Sbjct: 202 LMEELRQIHEGVKPDEVLLVVDAMIGQEAVNVAQSFHEQLELTGIVLTKLDGDTRGGAAI 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK VG GE++E LEPF+PDRMA RILGMGD+LS +EKAQ + E A EM+
Sbjct: 262 SVKAVTGCPIKFVGMGEKIEPLEPFHPDRMASRILGMGDMLSLIEKAQAAIDAEKAAEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ M+PGMGK+ + ++ E+ L +EA+++
Sbjct: 322 RKMRAAEFTFEDFLEQMAQVRKLGPLDQLLEMLPGMGKLKQLKDIQIDERQLARVEAIVK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE+ PE+L S RRKR+A SG T V++L+ Q MR MK
Sbjct: 382 SMTTEEKRNPEILNHS--RRKRIAAGSGTTVADVNRLIKQFDDMRRMMKQF 430
>gi|238916984|ref|YP_002930501.1| signal recognition particle, subunit SRP54 [Eubacterium eligens
ATCC 27750]
gi|238872344|gb|ACR72054.1| signal recognition particle, subunit SRP54 [Eubacterium eligens
ATCC 27750]
Length = 448
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL D+K ++ + +LVVD+MTGQ+A + ++FN ++GI G ILTKLDGD+RGGAAL
Sbjct: 202 MMNELIDIKANVSVDQTILVVDSMTGQDAVNVASSFNEKVGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA+ + + A+ M+
Sbjct: 262 SIKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAEAQLDADKAKAME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQV--REAEKSLKIMEAM 177
+K+ A FDFNDFL+ + MG +S ++ M+PG+ G++ + EAEK+++ E++
Sbjct: 322 EKLKKAEFDFNDFLEYMGQIKNMGGISSIMSMMPGLSGQMKNVSIDDDEAEKNMRRTESI 381
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
I +MT ER P++L +P R+ R+A+ +G V++LV Q QM+ MK + G+M+G
Sbjct: 382 IYSMTKAERSNPDIL--NPSRKNRIARGAGVDIADVNRLVKQFEQMKKMMKQMPGMMKG 438
>gi|281424055|ref|ZP_06254968.1| signal recognition particle protein [Prevotella oris F0302]
gi|281401838|gb|EFB32669.1| signal recognition particle protein [Prevotella oris F0302]
Length = 449
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 165/253 (65%), Gaps = 11/253 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEIANLKNALHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDAFHPMRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I +
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MTP+ER PELL S RR+R+A+ SG + Q+V++L+ Q Q R MK +M
Sbjct: 379 MTPKERTSPELLNTS--RRQRIAKGSGTSIQEVNKLIKQFDQTRKMMKMVTGNQMAGMMS 436
Query: 233 VMEGGSLPALSNL 245
M+G ++P + L
Sbjct: 437 RMKGMNIPGMPKL 449
>gi|306820620|ref|ZP_07454249.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551351|gb|EFM39313.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 443
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 166/240 (69%), Gaps = 9/240 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K + P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAAL
Sbjct: 201 LMQELKNIKSTVRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++
Sbjct: 261 SIRAVTNKPIKFAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQNAVDEQSMKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
KI + +F+F DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+
Sbjct: 321 NKIRNRDFNFEDFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAI 376
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I++MT +ER P ++ S R+ R+A+ SG QV++L+ Q + R MK + + GG
Sbjct: 377 IQSMTKQERLDPSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMGG 434
>gi|260591562|ref|ZP_05857020.1| signal recognition particle protein [Prevotella veroralis F0319]
gi|260536593|gb|EEX19210.1| signal recognition particle protein [Prevotella veroralis F0319]
Length = 451
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 159/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|257870294|ref|ZP_05649947.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|357050559|ref|ZP_09111757.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
gi|257804458|gb|EEV33280.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|355381212|gb|EHG28339.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
Length = 472
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKELAQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+G PIK G GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRQVTGAPIKFTGTGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM ++ + V+ K + +AM+
Sbjct: 322 QKMKENSFDFNDFVEQIDQVMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|385261944|ref|ZP_10040059.1| signal recognition particle protein [Streptococcus sp. SK643]
gi|385191685|gb|EIF39097.1| signal recognition particle protein [Streptococcus sp. SK643]
Length = 523
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDQQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|336395268|ref|ZP_08576667.1| signal recognition particle protein [Lactobacillus farciminis KCTC
3681]
Length = 478
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 171/247 (69%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K + +P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMEELQKIKDLAHPNEILFVADSMTGQVAAKVAHGFDEQLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ +E A+++
Sbjct: 262 SIRSVTGKPIKFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQTDYNEEQAKQVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+KI +FDFNDF+ Q + +MG + ++ MIPGM P A + EK + ++A++
Sbjct: 322 EKIRENSFDFNDFIDQMDQIQKMGPLDELMKMIPGMAN-NPALANINIGEKDIAHLKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP+ERE P+LL +P RR+R+A SG++ Q V++++ Q Q R ++M M G+
Sbjct: 381 YSMTPKEREDPDLL--NPSRRRRIAAGSGQSVQNVNRMIKQFKQSR----DMMNKMSKGN 434
Query: 239 LPALSNL 245
+ + L
Sbjct: 435 MAGMEQL 441
>gi|449965794|ref|ZP_21812028.1| signal recognition particle protein [Streptococcus mutans 15VF2]
gi|449170924|gb|EMB73611.1| signal recognition particle protein [Streptococcus mutans 15VF2]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|255037144|ref|YP_003087765.1| signal recognition particle protein [Dyadobacter fermentans DSM
18053]
gi|254949900|gb|ACT94600.1| signal recognition particle protein [Dyadobacter fermentans DSM
18053]
Length = 440
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 162/239 (67%), Gaps = 3/239 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++D+K + P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAAL
Sbjct: 199 MMKEVEDIKTSVKPSEILFVVDSMTGQDAVNTAKTFNERLDFDGVVLTKLDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V KPIK + GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRQVVEKPIKYISTGEKMEALDSFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ FDF+DFL Q + + +MG++ +IGMIPGMG + E S K +EA+I++
Sbjct: 319 AKMRQNKFDFDDFLGQLQQIKKMGNVKDLIGMIPGMGSAIKNLDIDNE-SFKPIEAIIQS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MT +ERE P+++ S R+KR+A SG T QV+ L+ Q +MR MK + + G L
Sbjct: 378 MTKKERENPDIIDGS--RKKRIAAGSGTTILQVNNLIKQFDEMRKMMKKMNTMQAAGKL 434
>gi|404485667|ref|ZP_11020864.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
gi|404338355|gb|EJZ64802.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
Length = 440
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NPTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKKKINPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVDKPIKFVGTGEKLEAIDYFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIHQIKKMGNLKDLASMIPGVGKAIK-DMDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP+ER PELL S RR+R+A SG + Q+V++L+ Q Q R M+
Sbjct: 379 MTPKERSNPELLNGS--RRQRIAAGSGTSIQEVNRLIKQFDQTRKMMR 424
>gi|450046423|ref|ZP_21838937.1| signal recognition particle protein [Streptococcus mutans N34]
gi|449198865|gb|EMB99957.1| signal recognition particle protein [Streptococcus mutans N34]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450052707|ref|ZP_21841379.1| signal recognition particle protein [Streptococcus mutans NFSM1]
gi|56968646|gb|AAW32279.1| Ffh [Streptococcus mutans]
gi|449200130|gb|EMC01176.1| signal recognition particle protein [Streptococcus mutans NFSM1]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449891169|ref|ZP_21787773.1| signal recognition particle protein [Streptococcus mutans SF12]
gi|449256864|gb|EMC54676.1| signal recognition particle protein [Streptococcus mutans SF12]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|421277208|ref|ZP_15728028.1| signal recognition particle protein [Streptococcus mitis SPAR10]
gi|395876489|gb|EJG87565.1| signal recognition particle protein [Streptococcus mitis SPAR10]
Length = 521
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|120603184|ref|YP_967584.1| signal recognition particle protein [Desulfovibrio vulgaris DP4]
gi|120563413|gb|ABM29157.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfovibrio vulgaris DP4]
Length = 508
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 167/244 (68%), Gaps = 6/244 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K +P E+L V DAMTGQ+A + FN ++GITG +LTK+DGD+RGGAAL
Sbjct: 200 LMDELAALKATFSPQEILFVADAMTGQDAVTVADAFNEKLGITGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G +K VG GE++ D+E F+PDR+AGRILGMGD+L+ +EKAQ ++ ++AE +
Sbjct: 260 SIKSVTGASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDMLTLIEKAQSTIEADEAEALT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK A+FD DF Q R + ++GS+ ++ MIPGMG + Q+ EK + +EA+I
Sbjct: 320 KKFQRASFDLEDFRTQMRRMKKLGSLEGILKMIPGMGALRDKLGQMSVPEKDMARIEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--G 236
+MT +ER P+++ S RR R+A+ SG T Q+V+QL+ QMR MK +M + + G
Sbjct: 380 SSMTMKERRNPDVINGS--RRARIAKGSGTTVQEVNQLLRNFEQMREMMKRVMNMGKPGG 437
Query: 237 GSLP 240
G +P
Sbjct: 438 GRMP 441
>gi|383790422|ref|YP_005474996.1| signal recognition particle protein [Spirochaeta africana DSM 8902]
gi|383106956|gb|AFG37289.1| signal recognition particle protein [Spirochaeta africana DSM 8902]
Length = 445
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 164/231 (70%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ VK+V+ P E +LV D+MTGQ A + FN +IG++G IL+K D D+RGGAAL
Sbjct: 201 LMKELQAVKKVVQPVESVLVADSMTGQSAVDIAKEFNEQIGLSGIILSKFDSDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++G PIK +G GE+ EDLEPFYPDR+AGRILGMGDV+S VEKAQE + +++A E+Q
Sbjct: 261 SLKTITGTPIKFIGVGEKTEDLEPFYPDRIAGRILGMGDVVSLVEKAQETIDEQEALELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ ANF D+L Q + V +MGSM ++GMIPGM G+++ + E LK EA+++
Sbjct: 321 QKMAKANFSLADYLDQIQRVKKMGSMESLLGMIPGMQGRVSEEDLNTDE--LKYEEAILQ 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E E ++ + RRKR+A+ SG T QV++++ + +MR MK +
Sbjct: 379 SMTRVELENYRIIGIN--RRKRIARGSGTTVYQVNRMLKKFDKMRTMMKKV 427
>gi|449968858|ref|ZP_21812871.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|450028539|ref|ZP_21832245.1| signal recognition particle protein [Streptococcus mutans G123]
gi|450056695|ref|ZP_21842180.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|450066939|ref|ZP_21846271.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|450092298|ref|ZP_21855923.1| signal recognition particle protein [Streptococcus mutans W6]
gi|450147551|ref|ZP_21875136.1| signal recognition particle protein [Streptococcus mutans 14D]
gi|449174709|gb|EMB77184.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|449195624|gb|EMB96938.1| signal recognition particle protein [Streptococcus mutans G123]
gi|449206440|gb|EMC07143.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|449208373|gb|EMC08968.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|449218645|gb|EMC18650.1| signal recognition particle protein [Streptococcus mutans W6]
gi|449236954|gb|EMC35853.1| signal recognition particle protein [Streptococcus mutans 14D]
Length = 516
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|325978265|ref|YP_004287981.1| signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|325178193|emb|CBZ48237.1| Signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 521
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|450063749|ref|ZP_21845104.1| signal recognition particle protein [Streptococcus mutans NLML5]
gi|449204410|gb|EMC05207.1| signal recognition particle protein [Streptococcus mutans NLML5]
Length = 516
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449886043|ref|ZP_21785923.1| signal recognition particle protein [Streptococcus mutans SA41]
gi|449915593|ref|ZP_21796362.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449944517|ref|ZP_21806769.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449947928|ref|ZP_21807721.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449988781|ref|ZP_21820736.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|450038971|ref|ZP_21835979.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449148475|gb|EMB52342.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449156236|gb|EMB59711.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449168107|gb|EMB70945.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449183439|gb|EMB85422.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|449200928|gb|EMC01945.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449254689|gb|EMC52587.1| signal recognition particle protein [Streptococcus mutans SA41]
Length = 516
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|306831354|ref|ZP_07464514.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426590|gb|EFM29702.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 521
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|189459673|ref|ZP_03008458.1| hypothetical protein BACCOP_00301 [Bacteroides coprocola DSM 17136]
gi|189433632|gb|EDV02617.1| signal recognition particle protein [Bacteroides coprocola DSM
17136]
Length = 441
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKNAINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTPEER PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPEERTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|317502602|ref|ZP_07960723.1| signal recognition particle protein [Prevotella salivae DSM 15606]
gi|315666283|gb|EFV05829.1| signal recognition particle protein [Prevotella salivae DSM 15606]
Length = 449
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 164/250 (65%), Gaps = 11/250 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIANLKNALHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDAFHPVRMADRILGMGDIVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK ++M
Sbjct: 379 MTPKERTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTGNQMASMMS 436
Query: 233 VMEGGSLPAL 242
M+G +P +
Sbjct: 437 RMKGMKMPGM 446
>gi|449882056|ref|ZP_21784753.1| signal recognition particle protein [Streptococcus mutans SA38]
gi|449924256|ref|ZP_21799534.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449163079|gb|EMB66194.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449250610|gb|EMC48663.1| signal recognition particle protein [Streptococcus mutans SA38]
Length = 516
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|322376834|ref|ZP_08051327.1| signal recognition particle protein [Streptococcus sp. M334]
gi|321282641|gb|EFX59648.1| signal recognition particle protein [Streptococcus sp. M334]
Length = 523
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|290580502|ref|YP_003484894.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449875574|ref|ZP_21782275.1| signal recognition particle protein [Streptococcus mutans S1B]
gi|254997401|dbj|BAH88002.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449253736|gb|EMC51678.1| signal recognition particle protein [Streptococcus mutans S1B]
Length = 516
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|116629442|ref|YP_814614.1| Signal recognition particle GTPase [Lactobacillus gasseri ATCC
33323]
gi|311110910|ref|ZP_07712307.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|420147406|ref|ZP_14654682.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
gi|116095024|gb|ABJ60176.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus gasseri ATCC 33323]
gi|311066064|gb|EFQ46404.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|398401407|gb|EJN54909.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
Length = 476
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ +NL
Sbjct: 434 MGEFANL 440
>gi|345880632|ref|ZP_08832178.1| signal recognition particle protein [Prevotella oulorum F0390]
gi|343922544|gb|EGV33244.1| signal recognition particle protein [Prevotella oulorum F0390]
Length = 448
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K L+P+E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIASLKEALHPSETLFVVDAMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ + KPIK VG GE+ME L+ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTIVTKPIKFVGTGEKMEALDVFHPNRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI FDFNDFL Q + +MG++ + MIPG+GK V + + +EA+I +
Sbjct: 320 RKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFVSIEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTG 428
>gi|383812645|ref|ZP_09968078.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
gi|383354702|gb|EID32253.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
Length = 451
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPRERTNPEVLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|449937443|ref|ZP_21804559.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|450077600|ref|ZP_21850546.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|450154315|ref|ZP_21877665.1| signal recognition particle protein [Streptococcus mutans 21]
gi|449164238|gb|EMB67305.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|449211007|gb|EMC11429.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|449237922|gb|EMC36717.1| signal recognition particle protein [Streptococcus mutans 21]
Length = 512
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 167/235 (71%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + +NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQIHETVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIE 179
K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++
Sbjct: 321 MKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVR 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT +ER+ P+++ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 381 SMTNKERQDPDMINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|380696278|ref|ZP_09861137.1| signal recognition particle protein [Bacteroides faecis MAJ27]
Length = 440
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PELL S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPELLNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|450034650|ref|ZP_21834504.1| signal recognition particle protein [Streptococcus mutans M21]
gi|449196176|gb|EMB97461.1| signal recognition particle protein [Streptococcus mutans M21]
Length = 516
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450109576|ref|ZP_21861516.1| signal recognition particle protein [Streptococcus mutans SM6]
gi|449225932|gb|EMC25497.1| signal recognition particle protein [Streptococcus mutans SM6]
Length = 516
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 163/239 (68%), Gaps = 10/239 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAM 177
+K+ +FDFNDF++Q V MG M ++ MIPGM + +V E E + K A+
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNPALANVKVDEGEIARK--RAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+ +MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 380 VSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449994935|ref|ZP_21822829.1| signal recognition particle protein [Streptococcus mutans A9]
gi|450009858|ref|ZP_21828384.1| signal recognition particle protein [Streptococcus mutans A19]
gi|450023214|ref|ZP_21830478.1| signal recognition particle protein [Streptococcus mutans U138]
gi|450116481|ref|ZP_21864528.1| signal recognition particle protein [Streptococcus mutans ST1]
gi|449184857|gb|EMB86770.1| signal recognition particle protein [Streptococcus mutans A9]
gi|449190757|gb|EMB92311.1| signal recognition particle protein [Streptococcus mutans A19]
gi|449193916|gb|EMB95286.1| signal recognition particle protein [Streptococcus mutans U138]
gi|449226962|gb|EMC26427.1| signal recognition particle protein [Streptococcus mutans ST1]
Length = 516
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 163/239 (68%), Gaps = 10/239 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAM 177
+K+ +FDFNDF++Q V MG M ++ MIPGM + +V E E + K A+
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNPALANVKVDEGEIARK--RAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+ +MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 380 VSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|419815224|ref|ZP_14339869.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
gi|404468938|gb|EKA13791.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
Length = 412
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 162 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 221
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 222 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 281
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 282 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 340
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 341 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 393
>gi|450182820|ref|ZP_21888463.1| signal recognition particle protein [Streptococcus mutans 24]
gi|449244145|gb|EMC42531.1| signal recognition particle protein [Streptococcus mutans 24]
Length = 516
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|357060101|ref|ZP_09120875.1| hypothetical protein HMPREF9332_00432 [Alloprevotella rava F0323]
gi|355376991|gb|EHG24231.1| hypothetical protein HMPREF9332_00432 [Alloprevotella rava F0323]
Length = 324
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 164/252 (65%), Gaps = 11/252 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 67 MMNEIAAIKEGINPDETLFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 126
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E L+ F+P RMA RILGMGDV++ VE+AQ+ +E+A+ +Q
Sbjct: 127 SIRTVVNKPIKFVGTGEKLEALDFFHPARMADRILGMGDVVTLVERAQQQYDEEEAKRLQ 186
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI FD NDFL Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 187 RKIQKNQFDLNDFLAQIQQIKKMGNLKELASMIPGVGKAL-KDVEIDDNAFKGIEAIIQS 245
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MTPEER +PE+L S RR R+A+ SG + Q+V +L+ Q Q R MK NLM
Sbjct: 246 MTPEERRRPEILNTS--RRNRIAKGSGTSTQEVGRLIKQFDQTRKMMKMMTGNKMANLMA 303
Query: 233 VMEGGSLPALSN 244
M G +P + +
Sbjct: 304 RMPKGKMPKMPD 315
>gi|357014337|ref|ZP_09079336.1| Ffh [Paenibacillus elgii B69]
Length = 455
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 172/247 (69%), Gaps = 3/247 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + ++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAA+
Sbjct: 201 LMEELKQIVEAVSPDEILLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAAI 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFAAMGEKLDALEPFHPERMASRILGMGDMLTLIEKAQASIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F+DFL+Q V ++G + +++ M+PG GKI + V+ +K + + A+++
Sbjct: 321 RKLRTAEFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKIKGMKDVKVDDKQMSRVAAIVK 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MT EER+ P+LL+ S RRKR+A SG + Q V++ + Q MR MK G+M
Sbjct: 381 SMTKEERQNPDLLSTS--RRKRLAAGSGNSVQDVNRFIKQFEDMRKMMKQFSGMMGPKGA 438
Query: 240 PALSNLE 246
L NL+
Sbjct: 439 KQLKNLK 445
>gi|386337727|ref|YP_006033896.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
gi|334280363|dbj|BAK27937.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 521
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|449918559|ref|ZP_21797416.1| signal recognition particle protein [Streptococcus mutans 1SM1]
gi|449160184|gb|EMB63462.1| signal recognition particle protein [Streptococcus mutans 1SM1]
Length = 516
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPEERENPNLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|307244407|ref|ZP_07526518.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492226|gb|EFM64268.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
Length = 452
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 163/231 (70%), Gaps = 6/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K +NP E+LLVVD+MTGQ+A + +FN +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMQELKDIKTQVNPQEILLVVDSMTGQDAVNVSESFNEILGIDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK +G GE++++LEPFYPDRMA RILGMGDVLS +EKA+ + E A+E+
Sbjct: 261 SIRAVTQKPIKFIGMGEKLDNLEPFYPDRMASRILGMGDVLSLIEKAESALDMEKAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
+K+ DF DFL Q V +G + +++ ++PGMG I Q+ + + K + +A+
Sbjct: 321 QKLKKNEMDFEDFLMQLEQVQNLGPLDKLLELVPGMGNIK-GQIGDLDSKGKEINRTKAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
I++MT EER P++L S R+KR+A+ SG + Q V++L+ Q +M+ MK
Sbjct: 380 IQSMTLEERRNPQILNAS--RKKRIARGSGTSVQDVNRLIKQFNEMKKMMK 428
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK V P EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELKQVHATAKPDEVLLVVDAMTGQDAVNVADSFNQQLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM+
Sbjct: 261 SVKAVTGCPIKFATLGEKMDALEPFHPERMASRILGMGDMLSLIEKAQANIDTEKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIE 179
K+ +A F F+DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++
Sbjct: 321 MKMRNAAFTFDDFLEQMQQVKKLGPIDQILDMIPGMNKMKQNANLKVDERQMGRIEAIVR 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT EER+ P+L+ S RRKR+A SG V++L+ Q +MR MK +M
Sbjct: 381 SMTNEERQDPDLINHS--RRKRIAAGSGTALADVNRLIKQFDEMRRMMKQFSDMM 433
>gi|417849418|ref|ZP_12495339.1| signal recognition particle protein [Streptococcus mitis SK1080]
gi|339456296|gb|EGP68888.1| signal recognition particle protein [Streptococcus mitis SK1080]
Length = 523
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVNERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307708829|ref|ZP_07645291.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
gi|307615195|gb|EFN94406.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
Length = 523
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|406660919|ref|ZP_11069046.1| hypothetical protein B879_01054 [Cecembia lonarensis LW9]
gi|405555302|gb|EKB50346.1| hypothetical protein B879_01054 [Cecembia lonarensis LW9]
Length = 445
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 166/247 (67%), Gaps = 8/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQLEQIKKMGNIKDLMGMIPGMGKAMKG-LDFDDDSFKPVEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME--- 235
MTP ERE P+++ S RRKR+A SG++ +V+ L+ Q MR MK N MG +
Sbjct: 378 MTPNERENPDIIDGS--RRKRIANGSGRSITEVNNLMKQFSDMRKMMKQMNKMGGAKRAL 435
Query: 236 GGSLPAL 242
GG LP +
Sbjct: 436 GGMLPGM 442
>gi|288800175|ref|ZP_06405634.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
gi|288333423|gb|EFC71902.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
Length = 446
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 165/250 (66%), Gaps = 11/250 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEISKLKESVQPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDLFHPSRMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + +MG++ + MIPG+GK + + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLKQIEQIKKMGNLKDLASMIPGVGKAVK-DLDIDDNAFKGVEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMG 232
MTP+ER PE++ S RR+R+A+ SG Q+V++L+ Q Q R MK N+M
Sbjct: 379 MTPKERTNPEIINTS--RRQRIAKGSGTDIQEVNRLMKQFDQTRKMMKMVTGNGMANMMS 436
Query: 233 VMEGGSLPAL 242
M+G +P +
Sbjct: 437 RMKGMKMPGM 446
>gi|422692890|ref|ZP_16750905.1| signal recognition particle protein [Enterococcus faecalis TX0031]
gi|315152349|gb|EFT96365.1| signal recognition particle protein [Enterococcus faecalis TX0031]
Length = 472
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELTNPNEILLVVDAMTGQDAVNVAVSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|261880314|ref|ZP_06006741.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
gi|270333004|gb|EFA43790.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
Length = 451
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K ++P E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIASLKEAISPDETLFVVDSMTGQDAVNTAKEFNDRIDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEALDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLNQIEQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFVGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER PE+L +S RR R+A+ SG + Q+V++LV Q Q R MK + G
Sbjct: 379 MTPRERTNPEVLNQS--RRLRIAKGSGTSIQEVNRLVKQFDQTRKMMKMVTG 428
>gi|302345690|ref|YP_003814043.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
gi|302150218|gb|ADK96480.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
Length = 450
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|282850847|ref|ZP_06260221.1| signal recognition particle protein [Lactobacillus gasseri 224-1]
gi|282557799|gb|EFB63387.1| signal recognition particle protein [Lactobacillus gasseri 224-1]
Length = 440
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 165 LMDELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAAL 224
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 225 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 284
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 285 EKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIV 343
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 344 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 397
Query: 239 LPALSNL 245
+ +NL
Sbjct: 398 MGEFANL 404
>gi|194398377|ref|YP_002037890.1| signal recognition particle protein [Streptococcus pneumoniae G54]
gi|194358044|gb|ACF56492.1| signal recognition particle protein [Streptococcus pneumoniae G54]
Length = 523
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEXLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|323340725|ref|ZP_08080977.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|323091848|gb|EFZ34468.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 493
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAAL
Sbjct: 214 LMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAAL 273
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 274 SIRAVTGKPIKFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELA 333
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++
Sbjct: 334 DKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIV 392
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+
Sbjct: 393 YSMTPAEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGN 446
Query: 239 LPALSNL 245
+ N+
Sbjct: 447 FGGMENM 453
>gi|149007045|ref|ZP_01830714.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|168484497|ref|ZP_02709449.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|307127122|ref|YP_003879153.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|417677022|ref|ZP_12326431.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|417696476|ref|ZP_12345655.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|418091914|ref|ZP_12729056.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|418110258|ref|ZP_12747281.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|418112633|ref|ZP_12749633.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|418132098|ref|ZP_12768973.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|418155278|ref|ZP_12792007.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|418162345|ref|ZP_12799029.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|418166925|ref|ZP_12803581.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|418169309|ref|ZP_12805952.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|418219027|ref|ZP_12845694.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|418221339|ref|ZP_12847992.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|418225677|ref|ZP_12852305.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|418238848|ref|ZP_12865401.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422864|ref|ZP_13963079.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|419460118|ref|ZP_14000047.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|419462451|ref|ZP_14002357.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|419466686|ref|ZP_14006569.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|419488363|ref|ZP_14028116.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|419512634|ref|ZP_14052268.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|419516909|ref|ZP_14056525.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|419526022|ref|ZP_14065584.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|421272862|ref|ZP_15723704.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|421283435|ref|ZP_15734222.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
gi|147761349|gb|EDK68315.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|172042260|gb|EDT50306.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|306484184|gb|ADM91053.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|332074621|gb|EGI85095.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|332201751|gb|EGJ15821.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|353764014|gb|EHD44564.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|353782461|gb|EHD62895.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|353782995|gb|EHD63424.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|353807764|gb|EHD88033.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|353820656|gb|EHE00839.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|353827774|gb|EHE07923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|353830521|gb|EHE10651.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|353834494|gb|EHE14595.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|353874649|gb|EHE54503.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|353875682|gb|EHE55534.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|353880874|gb|EHE60688.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|353893250|gb|EHE72996.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379531123|gb|EHY96358.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|379531922|gb|EHY97155.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|379544809|gb|EHZ09953.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|379558282|gb|EHZ23318.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|379587390|gb|EHZ52238.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|379590478|gb|EHZ55316.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|379637104|gb|EIA01662.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|379638982|gb|EIA03526.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|395874516|gb|EJG85599.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|395881398|gb|EJG92447.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
Length = 523
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|298530728|ref|ZP_07018130.1| signal recognition particle protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510102|gb|EFI34006.1| signal recognition particle protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 465
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 160/234 (68%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K +P E+L V DAMTGQ+A + FN + ITG +LTK++GD+RGGAAL
Sbjct: 200 LMQELVSIKEKCSPHEILFVADAMTGQDAVTVAQRFNDLLDITGVVLTKMEGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++ KPIK VG GE++ DLE F+PDR+A RILGMGDVL+ +EKAQE M Q++A MQ
Sbjct: 260 SIKSITNKPIKFVGTGEKLTDLEVFHPDRVASRILGMGDVLTLIEKAQEDMDQDEARAMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K + FD +DF KQ + +MGS+ ++ MIPGMGK+ V+ EK + M+AMI
Sbjct: 320 EKFQKSKFDLDDFRKQMGRLKKMGSIEGLLKMIPGMGKMRDKLKNVQMPEKEMGKMDAMI 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT +ER P++ S R++RVA+ SG T Q V+QL+ QM+ MK ++G
Sbjct: 380 NSMTRQERSNPKIFNAS--RKQRVARGSGTTVQDVNQLLTNFDQMQKMMKKMVG 431
>gi|365902815|ref|ZP_09440638.1| signal recognition particle protein [Lactobacillus malefermentans
KCTC 3548]
Length = 478
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 169/249 (67%), Gaps = 12/249 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + +P E+LLV+DAMTGQ A A F+ ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELSDIKELAHPDEILLVIDAMTGQNAVATAEGFDKKLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ +GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ + A+E+
Sbjct: 262 SIRAATGKPIKFVGQGEKMADLDVFHPDRMASRILGMGDMLSLIEKTQKKFDDKQAQELT 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDFL Q + MG M +I MIPGM PA V+ K ++ +A++
Sbjct: 322 EKMRENTFDFNDFLDQMTQIQSMGPMEDLIKMIPGMAN-NPALKNVQMDPKDIEHTKAVV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV 233
+MT ERE+PE+L +P RR+R+A SG+ +V++++ Q +M+ M+ N+ G+
Sbjct: 381 YSMTTAERERPEIL--NPSRRRRIAAGSGRPIHEVNRMIKQFGEMKKMMQQASNGNMSGM 438
Query: 234 --MEGGSLP 240
+ GGS+P
Sbjct: 439 EGLMGGSMP 447
>gi|303254469|ref|ZP_07340574.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|303258923|ref|ZP_07344902.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|303264276|ref|ZP_07350196.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
gi|302598555|gb|EFL65596.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|302639866|gb|EFL70322.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|302646088|gb|EFL76315.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|390442802|ref|ZP_10230602.1| signal recognition particle protein [Nitritalea halalkaliphila LW7]
gi|389667445|gb|EIM78865.1| signal recognition particle protein [Nitritalea halalkaliphila LW7]
Length = 445
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 167/245 (68%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLDFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENIDAFHPDRMAQRILGMGDVISLVERAQQSFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQLEQIKKMGNLKDLMGMIPGMGKALKG-LDIDDDSFKPIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP ERE P++L S RRKR+A+ SG++ +V+ L+ Q MR MK + + GG+
Sbjct: 378 MTPAEREHPDILDGS--RRKRIAKGSGRSITEVNNLLKQFNDMRKLMKQMNKM--GGAQK 433
Query: 241 ALSNL 245
AL ++
Sbjct: 434 ALGSM 438
>gi|255692684|ref|ZP_05416359.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
gi|260621568|gb|EEX44439.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
Length = 440
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|418977558|ref|ZP_13525374.1| signal recognition particle protein [Streptococcus mitis SK575]
gi|383349745|gb|EID27667.1| signal recognition particle protein [Streptococcus mitis SK575]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|345884305|ref|ZP_08835714.1| signal recognition particle protein [Prevotella sp. C561]
gi|345042866|gb|EGW46957.1| signal recognition particle protein [Prevotella sp. C561]
Length = 515
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 265 MMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 324
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 325 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 384
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 385 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGK-AIRDVDIDDNAFKGIEAIIQS 443
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 444 MTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 493
>gi|405760752|ref|YP_006701348.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
gi|404277641|emb|CCM08183.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|397649721|ref|YP_006490248.1| signal recognition particle protein [Streptococcus mutans GS-5]
gi|392603290|gb|AFM81454.1| signal recognition particle protein [Streptococcus mutans GS-5]
Length = 516
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q + MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQIQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|323344206|ref|ZP_08084432.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
gi|323094935|gb|EFZ37510.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
Length = 449
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K LNP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISELKNALNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A ++Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + GMIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNKFDFNDFLNQIEQIKKMGNLKDLAGMIPGVGK-AIKDIDIDDDAFKGVEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERSNPEMLNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|149019283|ref|ZP_01834645.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|418103002|ref|ZP_12740076.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|419475661|ref|ZP_14015501.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|419486818|ref|ZP_14026582.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|421209124|ref|ZP_15666138.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|421225165|ref|ZP_15681904.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|421240816|ref|ZP_15697361.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
gi|147931153|gb|EDK82132.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|353775635|gb|EHD56115.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|379561206|gb|EHZ26227.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|379586527|gb|EHZ51378.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|395573833|gb|EJG34419.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|395589217|gb|EJG49536.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|395607194|gb|EJG67291.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|423302186|ref|ZP_17280209.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
gi|408471277|gb|EKJ89809.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
Length = 440
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 155/230 (67%), Gaps = 7/230 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFIGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KKI FDFNDFL Q + +MG++ + MIPG+G PA + + + K +EA+I
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVG---PALKNIDIDDNAFKSIEAII 376
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 377 YSMTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|307709396|ref|ZP_07645854.1| signal recognition particle protein [Streptococcus mitis SK564]
gi|307619979|gb|EFN99097.1| signal recognition particle protein [Streptococcus mitis SK564]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|306825356|ref|ZP_07458696.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432294|gb|EFM35270.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418094094|ref|ZP_12731221.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
gi|353764590|gb|EHD45138.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|427394186|ref|ZP_18887688.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
gi|425730174|gb|EKU93017.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
Length = 499
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 164/242 (67%), Gaps = 9/242 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K ++P E+ LVVDAMTGQ+A + FN ++ I+ ILTKLDGD+RGGAAL
Sbjct: 202 LMDELANIKSAVDPEEIFLVVDAMTGQDAVNVADAFNDQLDISSVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ +++ KPIK G GE+++ L+PFYPDRMA RILGMGD+L+ VEKAQ+ M ++ A E+
Sbjct: 262 SISKITNKPIKFTGTGEKLDALDPFYPDRMANRILGMGDILTLVEKAQQDMDEKRARELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ +DFNDF++Q + MG M +I MIPGM ++ P + +K L M+A++
Sbjct: 322 DKMADQTYDFNDFIEQMDQMRNMGPMEDIIKMIPGMNQL-PGLDDFQVDDKDLDRMKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
++MT EER P++L+++ RR+R+A SG+ V +L+ Q Q R LMG M G
Sbjct: 381 QSMTMEERRNPDMLSQN--RRRRIAAGSGRPLADVHKLIKQFKQSR----ELMGKMSKGK 434
Query: 239 LP 240
+P
Sbjct: 435 MP 436
>gi|417940238|ref|ZP_12583526.1| signal recognition particle protein [Streptococcus oralis SK313]
gi|343389119|gb|EGV01704.1| signal recognition particle protein [Streptococcus oralis SK313]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|414158376|ref|ZP_11414670.1| signal recognition particle protein [Streptococcus sp. F0441]
gi|417794291|ref|ZP_12441549.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|334270135|gb|EGL88542.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|410870921|gb|EKS18878.1| signal recognition particle protein [Streptococcus sp. F0441]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|429752041|ref|ZP_19284928.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178225|gb|EKY19508.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 444
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 154/220 (70%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMNEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERSTPAIIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|417923660|ref|ZP_12567119.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|418966824|ref|ZP_13518531.1| signal recognition particle protein [Streptococcus mitis SK616]
gi|342836725|gb|EGU70934.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|383346269|gb|EID24329.1| signal recognition particle protein [Streptococcus mitis SK616]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417915214|ref|ZP_12558835.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
gi|342835328|gb|EGU69579.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417848493|ref|ZP_12494438.1| signal recognition particle protein [Streptococcus mitis SK1073]
gi|339452707|gb|EGP65330.1| signal recognition particle protein [Streptococcus mitis SK1073]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|288802708|ref|ZP_06408146.1| signal recognition particle protein [Prevotella melaninogenica D18]
gi|288334858|gb|EFC73295.1| signal recognition particle protein [Prevotella melaninogenica D18]
Length = 450
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PELL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPELLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|182684220|ref|YP_001835967.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
gi|182629554|gb|ACB90502.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|445118837|ref|ZP_21379078.1| signal recognition particle protein [Prevotella nigrescens F0103]
gi|444839514|gb|ELX66576.1| signal recognition particle protein [Prevotella nigrescens F0103]
Length = 450
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 164/245 (66%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K ++P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMGEIESLKEHVSPDEILFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMDALDVFHPTRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI+ FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKILKNKFDFNDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +
Sbjct: 379 MTPKERTSPEVLNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMG 436
Query: 241 ALSNL 245
+ N+
Sbjct: 437 KMKNM 441
>gi|307706752|ref|ZP_07643557.1| signal recognition particle protein [Streptococcus mitis SK321]
gi|307617837|gb|EFN96999.1| signal recognition particle protein [Streptococcus mitis SK321]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|241895650|ref|ZP_04782946.1| signal recognition particle protein Ffh [Weissella
paramesenteroides ATCC 33313]
gi|241871228|gb|EER74979.1| signal recognition particle protein Ffh [Weissella
paramesenteroides ATCC 33313]
Length = 485
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 162/239 (67%), Gaps = 8/239 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + +P E++LVVDAMTGQ A FN + ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADVKDIAHPDEIMLVVDAMTGQNAVETAEGFNDRLDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDYDEKQANETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ S FDFNDF+ Q + MG + ++ MIPGM PA + K + + A++
Sbjct: 322 EKMKSNTFDFNDFIDQMDQLQNMGPLEDIMKMIPGMAN-NPALKNAKIDPKDMAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEERE P++L +P R++R+A +G+ +V+++V Q QM+ K + GVM G
Sbjct: 381 MSMTPEERENPDVL--NPSRKRRLAAGAGRPVVEVNRMVKQFNQMK---KMMSGVMNGN 434
>gi|149012344|ref|ZP_01833413.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|169832782|ref|YP_001694736.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225854751|ref|YP_002736263.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|303261607|ref|ZP_07347554.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|303267279|ref|ZP_07353142.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|303268434|ref|ZP_07354229.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|387759487|ref|YP_006066465.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|418096377|ref|ZP_12733490.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|418139654|ref|ZP_12776480.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|418148686|ref|ZP_12785451.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|418160014|ref|ZP_12796713.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|418180682|ref|ZP_12817252.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|418182902|ref|ZP_12819462.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|418200008|ref|ZP_12836453.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|419514852|ref|ZP_14054477.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|419521248|ref|ZP_14060843.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|421220436|ref|ZP_15677280.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|421222746|ref|ZP_15679532.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|421296167|ref|ZP_15746878.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
gi|147763670|gb|EDK70605.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|168995284|gb|ACA35896.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225723340|gb|ACO19193.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|301802076|emb|CBW34809.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|302637187|gb|EFL67675.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|302642040|gb|EFL72392.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|302643206|gb|EFL73490.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|353769381|gb|EHD49899.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|353813361|gb|EHD93594.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|353821747|gb|EHE01923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|353845384|gb|EHE25426.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|353849043|gb|EHE29053.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|353865055|gb|EHE44964.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|353905127|gb|EHE80566.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|379538548|gb|EHZ03728.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|379635401|gb|EHZ99959.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|395587552|gb|EJG47899.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|395587808|gb|EJG48150.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|395896040|gb|EJH07008.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|15901147|ref|NP_345751.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|111658514|ref|ZP_01409180.1| hypothetical protein SpneT_02000341 [Streptococcus pneumoniae
TIGR4]
gi|148989312|ref|ZP_01820692.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|148998927|ref|ZP_01826362.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149002661|ref|ZP_01827593.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|168487456|ref|ZP_02711964.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|168491206|ref|ZP_02715349.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|168493207|ref|ZP_02717350.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|168575742|ref|ZP_02721657.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|221231975|ref|YP_002511127.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225859083|ref|YP_002740593.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|237649986|ref|ZP_04524238.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974]
gi|237821108|ref|ZP_04596953.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974M2]
gi|307067936|ref|YP_003876902.1| signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|387626577|ref|YP_006062752.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|415698973|ref|ZP_11457370.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|415749643|ref|ZP_11477587.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|415752329|ref|ZP_11479440.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|417679247|ref|ZP_12328644.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|417694199|ref|ZP_12343387.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|418074059|ref|ZP_12711315.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|418076430|ref|ZP_12713666.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|418078752|ref|ZP_12715975.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|418080725|ref|ZP_12717937.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|418086987|ref|ZP_12724157.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|418089661|ref|ZP_12726817.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|418098634|ref|ZP_12735733.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|418105354|ref|ZP_12742412.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|418114832|ref|ZP_12751820.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|418116996|ref|ZP_12753966.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|418121327|ref|ZP_12758271.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|418123542|ref|ZP_12760475.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|418128127|ref|ZP_12765022.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|418130445|ref|ZP_12767328.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|418135326|ref|ZP_12772182.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|418137312|ref|ZP_12774152.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|418144126|ref|ZP_12780926.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|418173647|ref|ZP_12810260.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|418178302|ref|ZP_12814886.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|418185094|ref|ZP_12821638.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|418187293|ref|ZP_12823819.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|418189519|ref|ZP_12826034.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|418193898|ref|ZP_12830389.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|418202524|ref|ZP_12838954.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|418216716|ref|ZP_12843439.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418230027|ref|ZP_12856630.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|419434387|ref|ZP_13974504.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|419440491|ref|ZP_13980539.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|419455667|ref|ZP_13995625.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|419457671|ref|ZP_13997615.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|419464590|ref|ZP_14004482.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|419469124|ref|ZP_14008995.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|419471210|ref|ZP_14011069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|419473327|ref|ZP_14013178.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|419477943|ref|ZP_14017767.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|419482318|ref|ZP_14022109.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|419491172|ref|ZP_14030911.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|419504064|ref|ZP_14043733.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|419509866|ref|ZP_14049510.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|419530027|ref|ZP_14069558.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|419532478|ref|ZP_14071994.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|419534761|ref|ZP_14074262.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|421211352|ref|ZP_15668335.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|421213342|ref|ZP_15670299.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|421215585|ref|ZP_15672506.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|421232027|ref|ZP_15688670.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|421234261|ref|ZP_15690881.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|421243217|ref|ZP_15699736.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|421247544|ref|ZP_15704030.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|421249572|ref|ZP_15706030.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|421270711|ref|ZP_15721566.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|421275004|ref|ZP_15725834.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|421279062|ref|ZP_15729869.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|421281247|ref|ZP_15732045.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|421285241|ref|ZP_15736018.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|421289884|ref|ZP_15740635.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|421298726|ref|ZP_15749414.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|421305204|ref|ZP_15755860.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|421307600|ref|ZP_15758243.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|421313744|ref|ZP_15764334.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444382017|ref|ZP_21180222.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
gi|444384538|ref|ZP_21182632.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|14972772|gb|AAK75391.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|147755237|gb|EDK62289.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147759272|gb|EDK66265.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|147925290|gb|EDK76369.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|183569731|gb|EDT90259.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|183574503|gb|EDT95031.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|183576649|gb|EDT97177.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|183578377|gb|EDT98905.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|220674435|emb|CAR68988.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225720844|gb|ACO16698.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|301794362|emb|CBW36790.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|306409473|gb|ADM84900.1| Signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|332073626|gb|EGI84105.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|332203136|gb|EGJ17204.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|353747943|gb|EHD28599.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|353749131|gb|EHD29781.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|353749559|gb|EHD30203.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|353753265|gb|EHD33889.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|353759248|gb|EHD39834.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|353761659|gb|EHD42225.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|353769994|gb|EHD50510.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|353777419|gb|EHD57892.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|353786345|gb|EHD66758.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|353789357|gb|EHD69752.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|353793229|gb|EHD73598.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|353796888|gb|EHD77226.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|353799558|gb|EHD79876.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|353801769|gb|EHD82069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|353809867|gb|EHD90127.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|353838464|gb|EHE18542.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|353845076|gb|EHE25119.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|353849413|gb|EHE29419.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|353851449|gb|EHE31444.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|353856661|gb|EHE36630.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|353859118|gb|EHE39073.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|353868327|gb|EHE48217.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|353872308|gb|EHE52174.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353887549|gb|EHE67327.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|353901303|gb|EHE76847.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|353901474|gb|EHE77016.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|379531544|gb|EHY96778.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|379537624|gb|EHZ02806.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|379545926|gb|EHZ11065.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|379547227|gb|EHZ12365.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|379552834|gb|EHZ17923.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|379564109|gb|EHZ29106.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|379565379|gb|EHZ30371.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|379574767|gb|EHZ39705.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|379575771|gb|EHZ40701.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|379578631|gb|EHZ43540.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|379579858|gb|EHZ44755.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|379593308|gb|EHZ58121.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|379606262|gb|EHZ71011.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|379606741|gb|EHZ71488.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|379628801|gb|EHZ93403.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|379633059|gb|EHZ97628.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|381310025|gb|EIC50858.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|381316497|gb|EIC57245.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|381317937|gb|EIC58662.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|395573310|gb|EJG33901.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|395579574|gb|EJG40072.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|395579792|gb|EJG40287.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|395595656|gb|EJG55886.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|395601209|gb|EJG61358.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|395608805|gb|EJG68897.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|395613916|gb|EJG73941.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|395614365|gb|EJG74386.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|395867840|gb|EJG78960.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|395874115|gb|EJG85203.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|395879674|gb|EJG90731.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|395882408|gb|EJG93455.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|395887220|gb|EJG98235.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|395889125|gb|EJH00136.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|395902682|gb|EJH13615.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|395905866|gb|EJH16771.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|395907513|gb|EJH18404.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|395914244|gb|EJH25088.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444252298|gb|ELU58762.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|444253616|gb|ELU60071.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418974258|ref|ZP_13522176.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383345430|gb|EID23554.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKVLAQPNEILLVVDAMIGQEAANVAHEFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|304383803|ref|ZP_07366261.1| signal recognition particle protein [Prevotella marshii DSM 16973]
gi|304335059|gb|EFM01331.1| signal recognition particle protein [Prevotella marshii DSM 16973]
Length = 452
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 168/258 (65%), Gaps = 7/258 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K+ + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMSEIATLKKAVTPDETLFVVDAMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+PDRMA RILGMGD++S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPDRMADRILGMGDIVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI FDF DFL Q + + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 RKIQKNKFDFEDFLNQIQQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFKGIEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S R++R+A+ SG Q++++L+ Q QMR MK +M GG+
Sbjct: 379 MTPKERTHPEILNTS--RKQRIAKGSGTDIQEINKLLKQFEQMRKMMK----MMSGGAGS 432
Query: 241 ALSNLEDALKSEQKAPPG 258
+ + A+K+ + PG
Sbjct: 433 NMMRMAGAMKNMRGRMPG 450
>gi|85817238|gb|EAQ38421.1| signal recognition 54 kDa protein [Dokdonia donghaensis MED134]
Length = 442
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ DV + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMKEIADVHTAIQPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + V +MG+M ++GMIPG GK+ V + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQIQQVKKMGNMKDLMGMIPGAGKMLK-DVDIDDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ERE P + S R+KR+ + SG + QQV+QL+ Q
Sbjct: 379 MTPGERENPSTINAS--RKKRIGKGSGTSVQQVNQLLKQF 416
>gi|419442690|ref|ZP_13982718.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
gi|379551991|gb|EHZ17082.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|332290696|ref|YP_004429305.1| signal recognition particle protein [Krokinobacter sp. 4H-3-7-5]
gi|332168782|gb|AEE18037.1| signal recognition particle protein [Krokinobacter sp. 4H-3-7-5]
Length = 442
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ DV + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMKEIADVHAAIQPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + V +MG+M ++GMIPG GK+ V + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQIQQVKKMGNMKDLMGMIPGAGKMLK-DVDIDDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ERE P + S R+KR+ + SG + QQV+QL+ Q
Sbjct: 379 MTPGERENPTTINAS--RKKRIGKGSGTSVQQVNQLLKQF 416
>gi|335996783|ref|ZP_08562700.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|417974277|ref|ZP_12615098.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|335351853|gb|EGM53344.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|346329274|gb|EGX97572.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 481
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELARIKELTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+
Sbjct: 262 SIRAVTGKPIKFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FDFNDF++Q V MG + ++ MIPGM PA V+ K ++ +A++
Sbjct: 322 DKMRENTFDFNDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ERE P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+
Sbjct: 381 YSMTPAEREDPDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGN 434
Query: 239 LPALSNL 245
+ N+
Sbjct: 435 FGGMENM 441
>gi|213962455|ref|ZP_03390717.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
gi|213954781|gb|EEB66101.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
Length = 442
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERSTPAIIDLS--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|357057488|ref|ZP_09118348.1| signal recognition particle protein [Selenomonas infelix ATCC
43532]
gi|355375392|gb|EHG22679.1| signal recognition particle protein [Selenomonas infelix ATCC
43532]
Length = 458
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
K+ +F +DFL Q + V ++GS++ ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 AKLRKNDFTLDDFLDQLQQVKKLGSLNSILGMIPGMGNLKKKLGDQEFDLDGKEMRQLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 163/234 (69%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K + P E+LLVVDAMTGQ A + F+ +G+TGAI TKLDGD++GGAAL
Sbjct: 201 LMEELERMKAAVVPGEILLVVDAMTGQSAVEVAEAFHGRLGLTGAIFTKLDGDTKGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ V+G PIK G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ+ + E A++++
Sbjct: 261 SILSVAGCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVLTLIEKAQQTVDAEKAKQLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+++ + F DFL Q R V ++G + +++GM+PGM KI ++ E+ L +EA+I
Sbjct: 321 RQLRAGEFSLEDFLDQLRQVRKLGPLDQLLGMLPGMNKIKGLGNLQVDERQLGRVEAIIL 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTPEER +PEL+ S RR+R+A SG + V +L+ Q +MR MK G+
Sbjct: 381 SMTPEERRRPELIDAS--RRRRIASGSGTRVEDVGRLLKQFKEMRKMMKQFSGM 432
>gi|224024147|ref|ZP_03642513.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
gi|224017369|gb|EEF75381.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
Length = 443
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K +NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKNAINPDETLFVVDAMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNQFDFNDFLTQIQQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPQERTHPEILNGS--RRTRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|15903209|ref|NP_358759.1| signal recognition particle protein [Streptococcus pneumoniae R6]
gi|116515651|ref|YP_816611.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|421266304|ref|ZP_15717185.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
gi|15458797|gb|AAK99969.1| Signal recognition particle (Fifty four homolog) [Streptococcus
pneumoniae R6]
gi|116076227|gb|ABJ53947.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|395867520|gb|EJG78643.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|56419731|ref|YP_147049.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297530628|ref|YP_003671903.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|319766210|ref|YP_004131711.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|448237352|ref|YP_007401410.1| signal recognition particle protein [Geobacillus sp. GHH01]
gi|56379573|dbj|BAD75481.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297253880|gb|ADI27326.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|317111076|gb|ADU93568.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|445206194|gb|AGE21659.1| signal recognition particle protein [Geobacillus sp. GHH01]
Length = 446
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 161/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A F +DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I
Sbjct: 322 QKMRTATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 382 SMTKEEKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|414564036|ref|YP_006042997.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847101|gb|AEJ25313.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 164/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL++VK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMDELREVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF++Q V MG M ++ MIPGM P A ++ +K + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAT-NPALANIKVDDKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE+PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEEREQPELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|270292853|ref|ZP_06199064.1| signal recognition particle protein [Streptococcus sp. M143]
gi|270278832|gb|EFA24678.1| signal recognition particle protein [Streptococcus sp. M143]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|421238897|ref|ZP_15695463.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|421245173|ref|ZP_15701672.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
gi|395601334|gb|EJG61482.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|395608609|gb|EJG68702.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKMDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|332877610|ref|ZP_08445354.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332684459|gb|EGJ57312.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 442
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMNEISNIHQAIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
++K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 TIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P ++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 379 MTPKERSNPAIIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|329115921|ref|ZP_08244638.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|326906326|gb|EGE53240.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|456370942|gb|EMF49838.1| Signal recognition particle [Streptococcus parauberis KRS-02109]
gi|457095553|gb|EMG26037.1| Signal recognition particle [Streptococcus parauberis KRS-02083]
Length = 524
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMGELRDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+
Sbjct: 262 SVREITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTP ERE PELL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 382 SMTPTERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|289168093|ref|YP_003446362.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
gi|288907660|emb|CBJ22497.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFAGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|406588087|ref|ZP_11062807.1| signal recognition particle protein, partial [Streptococcus sp.
GMD1S]
gi|404469925|gb|EKA14622.1| signal recognition particle protein, partial [Streptococcus sp.
GMD1S]
Length = 277
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 7 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 66
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 67 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 126
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 127 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 185
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 186 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 238
>gi|418107712|ref|ZP_12744750.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|418176100|ref|ZP_12812694.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
gi|353779895|gb|EHD60359.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|353841539|gb|EHE21594.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
Length = 487
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 166 LMNELRDVKTLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 225
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 226 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 285
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 286 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 344
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 345 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|307565825|ref|ZP_07628286.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
gi|307345449|gb|EFN90825.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
Length = 456
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 167/253 (66%), Gaps = 9/253 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKNHITPDETLFVVDSMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+M+ ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMDAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFYNQIQQIKKMGNLKDLASMIPGVGK-AIRDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG--- 237
MTP+ER PE+L + +RR+R+A+ SG Q+V++L+ Q Q R MK + G G
Sbjct: 379 MTPKERTNPEIL--NNIRRRRIAKGSGTDIQEVNRLLKQFDQTRKMMKMVTGSKMAGMMS 436
Query: 238 ---SLPALSNLED 247
SL +SN+ D
Sbjct: 437 RMKSLKNMSNMPD 449
>gi|374813239|ref|ZP_09716976.1| signal recognition particle protein [Treponema primitia ZAS-1]
Length = 458
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 163/231 (70%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL +K P E+LLV D+MTGQ A + TF+ +IG+TG ILTK D D+RGGAAL
Sbjct: 209 MMEELSLLKNAAKPDELLLVADSMTGQSAVDIAKTFDEKIGLTGVILTKFDSDTRGGAAL 268
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKP+K VG GE+ ED EPF+P+RMA RILGMGDV++ VEKAQEV+ Q++AEE++
Sbjct: 269 SLKTVTGKPLKFVGTGEKPEDFEPFHPERMASRILGMGDVVTLVEKAQEVIDQKEAEELR 328
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KK+ NF D+L Q R++ +MGS+ ++ MIPGM G+I+ + +AE LK EA++
Sbjct: 329 KKMEKENFTLEDWLSQLRSMKKMGSLQSMLEMIPGMAGQISEEDIDKAE--LKYQEAILS 386
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER ++ P RR R+A+ SG + +V +L+ + +MR MK +
Sbjct: 387 SMTRKERANHLIIG--PSRRSRIARGSGTSVSEVGRLLKKFEKMRTMMKKM 435
>gi|225860882|ref|YP_002742391.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230784|ref|ZP_06964465.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254274|ref|ZP_06977860.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502715|ref|YP_003724655.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788081|ref|YP_006253149.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|418083186|ref|ZP_12720385.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|418085327|ref|ZP_12722509.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|418100317|ref|ZP_12737405.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|418119991|ref|ZP_12756942.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|418141847|ref|ZP_12778660.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|418150745|ref|ZP_12787492.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|418153004|ref|ZP_12789743.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|418157241|ref|ZP_12793957.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|418171136|ref|ZP_12807763.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|418195493|ref|ZP_12831973.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|418198091|ref|ZP_12834551.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|418223322|ref|ZP_12849963.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|419425283|ref|ZP_13965480.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|419427233|ref|ZP_13967416.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|419429411|ref|ZP_13969578.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|419436128|ref|ZP_13976218.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|419444532|ref|ZP_13984547.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|419446663|ref|ZP_13986668.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|419448892|ref|ZP_13988889.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|419451595|ref|ZP_13991581.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|419501991|ref|ZP_14041675.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|419519049|ref|ZP_14058655.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|419528669|ref|ZP_14068211.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|421287407|ref|ZP_15738173.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
gi|225728379|gb|ACO24230.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238310|gb|ADI69441.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|353755262|gb|EHD35867.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|353757282|gb|EHD37876.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|353773026|gb|EHD53525.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|353789104|gb|EHD69500.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|353806098|gb|EHD86372.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|353814628|gb|EHD94851.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|353817555|gb|EHD97757.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|353823689|gb|EHE03863.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|353837306|gb|EHE17392.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|353862020|gb|EHE41953.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|353862729|gb|EHE42659.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|353879448|gb|EHE59274.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|379137823|gb|AFC94614.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|379551359|gb|EHZ16454.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|379564692|gb|EHZ29688.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|379572225|gb|EHZ37182.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|379600204|gb|EHZ64985.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|379614203|gb|EHZ78913.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|379615148|gb|EHZ79857.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|379618686|gb|EHZ83361.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|379619720|gb|EHZ84390.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|379623300|gb|EHZ87934.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|379623950|gb|EHZ88583.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|379640886|gb|EIA05424.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|395889816|gb|EJH00823.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
Length = 523
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307704985|ref|ZP_07641872.1| signal recognition particle protein [Streptococcus mitis SK597]
gi|307621436|gb|EFO00486.1| signal recognition particle protein [Streptococcus mitis SK597]
Length = 523
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|261419395|ref|YP_003253077.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
gi|261375852|gb|ACX78595.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
Length = 469
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 161/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A F +DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I
Sbjct: 322 QKMRTATFTLDDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 382 SMTKEEKTHPEIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|433448715|ref|ZP_20411581.1| signal recognition particle protein [Weissella ceti NC36]
gi|429539642|gb|ELA07678.1| signal recognition particle protein [Weissella ceti NC36]
Length = 479
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 9/241 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + P E++LVVDAMTGQ A FN +GITG LTKLDGD+RGGAAL
Sbjct: 202 LMQELADIKEIAQPDEIMLVVDAMTGQNATETAEGFNERLGITGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G+PIK VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ A+
Sbjct: 262 SIRAVTGQPIKFVGQGEKMTDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEKQAQATM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDFL Q + V MG M ++ MIPGM PA V+ +K + ++A++
Sbjct: 322 EKMKDKTFDFNDFLDQMQQVQNMGPMEDILKMIPGMAN-NPALQNVQINDKDMAHIKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ERE P+LL +P RR+R+A +G+ +V++L+ Q + MK +MG + G+
Sbjct: 381 YSMTPAERENPDLL--NPSRRRRLAAGAGRPVVEVNKLIKQFNE----MKKMMGQVMNGN 434
Query: 239 L 239
+
Sbjct: 435 M 435
>gi|429735334|ref|ZP_19269302.1| signal recognition particle protein [Selenomonas sp. oral taxon 138
str. F0429]
gi|429159145|gb|EKY01663.1| signal recognition particle protein [Selenomonas sp. oral taxon 138
str. F0429]
Length = 458
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
K+ +F +DFL Q + V ++GS++ ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 AKLRKNDFTLDDFLDQLQQVKKLGSLNSILGMIPGMGNLKKKLGDQEFDLDGKEMRQLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|410030457|ref|ZP_11280287.1| signal recognition particle protein [Marinilabilia sp. AK2]
Length = 445
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 167/247 (67%), Gaps = 8/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRLN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQLEQIKKMGNIKDLVGMIPGMGKAMKG-LDIDDDSFKPVEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME--- 235
MTP ERE P+++ S RRKR+A+ SG++ +V+ L+ Q MR MK N MG +
Sbjct: 378 MTPTERENPDIIDGS--RRKRIAEGSGRSITEVNNLMKQFSDMRKMMKQMNKMGGAKRAL 435
Query: 236 GGSLPAL 242
GG +P +
Sbjct: 436 GGMIPGM 442
>gi|333993133|ref|YP_004525746.1| signal recognition particle protein [Treponema azotonutricium
ZAS-9]
gi|333736117|gb|AEF82066.1| signal recognition particle protein [Treponema azotonutricium
ZAS-9]
Length = 449
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 159/218 (72%), Gaps = 5/218 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K V NP E+LLV DAMTGQ A + F+ +IG+TG +LTK D D+RGGAAL
Sbjct: 201 MMQELSRLKEVSNPDELLLVADAMTGQSAVDIAKAFDEKIGLTGVVLTKFDSDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKP+K VG GE+ ED EPF+PDR+AGRILGMGDV+S VEKAQEV+ Q+DA+E+Q
Sbjct: 261 SLKTITGKPLKFVGVGEKPEDFEPFHPDRIAGRILGMGDVVSLVEKAQEVIDQKDAQELQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KK+ F D+L Q R+V +MGS+++++ MIPGM G+++ + +AE L+ EA++
Sbjct: 321 KKMEKETFTLEDWLDQLRSVKKMGSLNKMLEMIPGMAGQVSEEDIDKAE--LQTQEAILS 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT +ER ++ P RR RVA+ SG + +VS+L+
Sbjct: 379 SMTRKERANHLMIG--PSRRARVARGSGTSVAEVSRLL 414
>gi|417934365|ref|ZP_12577685.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
gi|340770935|gb|EGR93450.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
Length = 523
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417312813|ref|ZP_12099525.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|418227845|ref|ZP_12854463.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|419438363|ref|ZP_13978433.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|421236406|ref|ZP_15693004.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
gi|327389521|gb|EGE87866.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|353882073|gb|EHE61885.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|379538368|gb|EHZ03549.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|395602251|gb|EJG62394.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
Length = 523
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|304437009|ref|ZP_07396972.1| signal recognition particle protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369960|gb|EFM23622.1| signal recognition particle protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 458
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAEVKPHEILLVVDAMTGQEAVNVAEAFDASLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPLKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL Q + V ++GS+S ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 EKLRRNDFTLDDFLDQMQQVKKLGSLSNILGMIPGMGALKKKLGDQEFDLDGKEMRRLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|229549880|ref|ZP_04438605.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255972664|ref|ZP_05423250.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256959109|ref|ZP_05563280.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|257079141|ref|ZP_05573502.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294781588|ref|ZP_06746924.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|307269511|ref|ZP_07550850.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|312951630|ref|ZP_07770525.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|384518726|ref|YP_005706031.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|397700009|ref|YP_006537797.1| signal recognition particle protein [Enterococcus faecalis D32]
gi|422708604|ref|ZP_16766132.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|422727183|ref|ZP_16783626.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|422734180|ref|ZP_16790474.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|422869223|ref|ZP_16915743.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|229304953|gb|EEN70949.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255963682|gb|EET96158.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256949605|gb|EEU66237.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|256987171|gb|EEU74473.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294451284|gb|EFG19750.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|306514131|gb|EFM82707.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|310630347|gb|EFQ13630.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|315037112|gb|EFT49044.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|315158208|gb|EFU02225.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|315168902|gb|EFU12919.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|323480859|gb|ADX80298.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|329571907|gb|EGG53585.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|397336648|gb|AFO44320.1| signal recognition particle protein [Enterococcus faecalis D32]
Length = 472
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELTNPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|238926150|ref|ZP_04657910.1| signal recognition particle protein Ffh [Selenomonas flueggei ATCC
43531]
gi|238886040|gb|EEQ49678.1| signal recognition particle protein Ffh [Selenomonas flueggei ATCC
43531]
Length = 458
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAEVKPHEILLVVDAMTGQEAVNVAEAFDASLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPLKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL Q + V ++GS+S ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 EKLRRNDFTLDDFLDQMQQVKKLGSLSNILGMIPGMGALKKKLGDQEFDLDGKEMRRLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|358464807|ref|ZP_09174765.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
gi|357066336|gb|EHI76486.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
Length = 523
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|312903448|ref|ZP_07762628.1| signal recognition particle protein [Enterococcus faecalis TX0635]
gi|310633324|gb|EFQ16607.1| signal recognition particle protein [Enterococcus faecalis TX0635]
Length = 472
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|373462521|ref|ZP_09554240.1| signal recognition particle protein [Prevotella maculosa OT 289]
gi|371948085|gb|EHO65975.1| signal recognition particle protein [Prevotella maculosa OT 289]
Length = 449
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 166/262 (63%), Gaps = 12/262 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMIEISNLKNSLHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFVGTGEKMEAIDVFHPARMADRILGMGDIVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +
Sbjct: 379 MTPKERTSPEILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKTITGNQMAGMMS 436
Query: 241 ALSNLEDALKSEQKAPPGTARR 262
+ + PG A+R
Sbjct: 437 RMKGMN---------IPGMAKR 449
>gi|50914250|ref|YP_060222.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
gi|50903324|gb|AAT87039.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
Length = 522
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|393784555|ref|ZP_10372718.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
gi|392665536|gb|EIY59060.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
Length = 440
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 155/232 (66%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMKEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTPEER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPEERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|46579253|ref|YP_010061.1| signal recognition particle protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152638|ref|YP_005701574.1| signal recognition particle protein [Desulfovibrio vulgaris RCH1]
gi|46448667|gb|AAS95320.1| signal recognition particle protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233082|gb|ADP85936.1| signal recognition particle protein [Desulfovibrio vulgaris RCH1]
Length = 508
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 166/244 (68%), Gaps = 6/244 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K P E+L V DAMTGQ+A + FN ++GITG +LTK+DGD+RGGAAL
Sbjct: 200 LMDELAALKATFAPQEILFVADAMTGQDAVTVADAFNEKLGITGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G +K VG GE++ D+E F+PDR+AGRILGMGD+L+ +EKAQ ++ ++AE +
Sbjct: 260 SIKSVTGASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDMLTLIEKAQSTIEADEAEALT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK A+FD DF Q R + ++GS+ ++ MIPGMG + Q+ EK + +EA+I
Sbjct: 320 KKFQRASFDLEDFRTQMRRMKKLGSLEGILKMIPGMGALRDKLGQMSVPEKDMARIEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--G 236
+MT +ER P+++ S RR R+A+ SG T Q+V+QL+ QMR MK +M + + G
Sbjct: 380 SSMTMKERRNPDVINGS--RRARIAKGSGTTVQEVNQLLRNFEQMREMMKRVMNMGKPGG 437
Query: 237 GSLP 240
G +P
Sbjct: 438 GRMP 441
>gi|19746132|ref|NP_607268.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
gi|19748308|gb|AAL97767.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
Length = 520
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|307277934|ref|ZP_07559018.1| signal recognition particle protein [Enterococcus faecalis TX0860]
gi|306505331|gb|EFM74517.1| signal recognition particle protein [Enterococcus faecalis TX0860]
Length = 472
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|417686764|ref|ZP_12336040.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|419523741|ref|ZP_14063318.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
gi|332074900|gb|EGI85372.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|379556916|gb|EHZ21964.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
Length = 487
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 166 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 225
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 226 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 285
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 286 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 344
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 345 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|325290414|ref|YP_004266595.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
gi|324965815|gb|ADY56594.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 162/233 (69%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K V+ P E+LLVVDAMTGQ+A + TFN ++ ++G IL+KLDGD+RGGAA+
Sbjct: 201 LMGELEDIKAVVQPHEILLVVDAMTGQDAVNVAETFNSKLALSGVILSKLDGDTRGGAAI 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+G PIK G GE+M+ LE FYPDRM RILGMGDVL+ +EKAQ + A+E++
Sbjct: 261 SVRSVTGCPIKYAGVGEKMDALEVFYPDRMVSRILGMGDVLTLIEKAQNAFDDKKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI +DFL Q + +MGS+S V+ MIPG+GK V+ +K +EAMI++
Sbjct: 321 EKIRKQELTLDDFLDQINQLRKMGSLSSVLEMIPGIGK-QLKDVQIDDKEFARVEAMIQS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT EER +P ++ +S R+KR+A+ SG + Q V +L+ Q Q + MK + G+
Sbjct: 380 MTVEERTRPAVIKDS--RKKRIARGSGTSVQDVGKLIKQYEQTKKMMKQMSGL 430
>gi|259503527|ref|ZP_05746429.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
gi|259168605|gb|EEW53100.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
Length = 480
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 166/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K +++P E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMDELANIKELVHPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E
Sbjct: 262 SIRAVTGKPIKFVGEGEKMSDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ FD+NDFL Q V +MG + ++ M+PGM PA V K ++A++
Sbjct: 322 DKMRENTFDYNDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNVNLDPKQFAHIKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTP ERE P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + G+
Sbjct: 381 LSMTPAERENPDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMKQV----TNGN 434
Query: 239 LPALSNL 245
+ + NL
Sbjct: 435 MSGMQNL 441
>gi|153808568|ref|ZP_01961236.1| hypothetical protein BACCAC_02864 [Bacteroides caccae ATCC 43185]
gi|423219382|ref|ZP_17205878.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
gi|149128890|gb|EDM20107.1| signal recognition particle protein [Bacteroides caccae ATCC 43185]
gi|392625432|gb|EIY19498.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
Length = 440
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|384098679|ref|ZP_09999792.1| signal recognition particle protein [Imtechella halotolerans K1]
gi|383835122|gb|EID74550.1| signal recognition particle protein [Imtechella halotolerans K1]
Length = 445
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +V + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMKEIANVHKAIQPHETLFVVDAMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLTQIQQIKKMGSMKDLMGMIPGAGKALKG-IEIEDDAFKHVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER P + S R+ R+A+ SG + QQV+QL+ Q
Sbjct: 379 MTPEERANPSTINTS--RKNRIAKGSGTSIQQVNQLMKQF 416
>gi|392396333|ref|YP_006432934.1| signal recognition particle subunit FFH/SRP54 (srp54) [Flexibacter
litoralis DSM 6794]
gi|390527411|gb|AFM03141.1| signal recognition particle subunit FFH/SRP54 (srp54) [Flexibacter
litoralis DSM 6794]
Length = 445
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 159/231 (68%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E++++KRVLNPTE L VVDAMTGQ+A FN I G +LTKLDGDSRGGAAL
Sbjct: 199 LMKEIEEIKRVLNPTETLFVVDAMTGQDAVTTAKIFNDRINYDGVVLTKLDGDSRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G E+M+ ++ F+PDRMA RILGMGDVLS V++ Q+ +++A +
Sbjct: 259 SIRRVVDKPIKFIGTSEKMDGIDAFHPDRMAQRILGMGDVLSLVDRMQQAYDEDEARRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
KKI FDFNDF+ Q + +MG++ ++GM+PG+G K+ Q+ + + + +EA+I
Sbjct: 319 KKIRKNQFDFNDFISQIEQIKKMGNIKDLVGMLPGIGSKLKDFQI--DDDAFRPIEAIIN 376
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E+ P++L S RR+R+A SG+T Q+V+ L+ Q +MR M+ +
Sbjct: 377 SMTDHEKANPDVLDGS--RRRRLAAGSGRTIQEVNNLIKQFGEMRKMMRKM 425
>gi|229545688|ref|ZP_04434413.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255975716|ref|ZP_05426302.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256619193|ref|ZP_05476039.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256853255|ref|ZP_05558625.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|257082423|ref|ZP_05576784.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|257085055|ref|ZP_05579416.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|257090014|ref|ZP_05584375.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257416220|ref|ZP_05593214.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257422483|ref|ZP_05599473.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|300860172|ref|ZP_07106259.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|307275840|ref|ZP_07556979.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|307289238|ref|ZP_07569194.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|307291863|ref|ZP_07571734.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|312901896|ref|ZP_07761161.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|422685856|ref|ZP_16744069.1| signal recognition particle protein, partial [Enterococcus faecalis
TX4000]
gi|422689235|ref|ZP_16747347.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|422695111|ref|ZP_16753099.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|422699083|ref|ZP_16756956.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|422701890|ref|ZP_16759730.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|422704606|ref|ZP_16762416.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|422706535|ref|ZP_16764233.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|422720786|ref|ZP_16777395.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|422728773|ref|ZP_16785179.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|424761189|ref|ZP_18188771.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|428767136|ref|YP_007153247.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
gi|229309138|gb|EEN75125.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255968588|gb|EET99210.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256598720|gb|EEU17896.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256711714|gb|EEU26752.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|256990453|gb|EEU77755.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|256993085|gb|EEU80387.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|256998826|gb|EEU85346.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257158048|gb|EEU88008.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257164307|gb|EEU94267.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|295113085|emb|CBL31722.1| signal recognition particle subunit FFH/SRP54 (srp54) [Enterococcus
sp. 7L76]
gi|300849211|gb|EFK76961.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|306497129|gb|EFM66675.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|306499947|gb|EFM69308.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|306507532|gb|EFM76663.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|311291089|gb|EFQ69645.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|315029568|gb|EFT41500.1| signal recognition particle protein [Enterococcus faecalis TX4000]
gi|315032040|gb|EFT43972.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|315147394|gb|EFT91410.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|315150780|gb|EFT94796.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|315156150|gb|EFU00167.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|315163852|gb|EFU07869.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|315169591|gb|EFU13608.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|315172461|gb|EFU16478.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|315577856|gb|EFU90047.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|402402452|gb|EJV35168.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|427185309|emb|CCO72533.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
Length = 472
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|322374427|ref|ZP_08048941.1| signal recognition particle protein [Streptococcus sp. C300]
gi|331266505|ref|YP_004326135.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|406577203|ref|ZP_11052819.1| signal recognition particle protein [Streptococcus sp. GMD6S]
gi|419778920|ref|ZP_14304801.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|321279927|gb|EFX56966.1| signal recognition particle protein [Streptococcus sp. C300]
gi|326683177|emb|CBZ00795.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|383186684|gb|EIC79149.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|404460210|gb|EKA06486.1| signal recognition particle protein [Streptococcus sp. GMD6S]
Length = 523
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|306829387|ref|ZP_07462577.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
gi|304428473|gb|EFM31563.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
Length = 523
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|392331490|ref|ZP_10276105.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
gi|391419169|gb|EIQ81981.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
Length = 522
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK ++NP ++LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKGLVNPNDILLVVDSMIGQEAANVAEEFNRQLSITGLVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G + ++ +K + A++
Sbjct: 322 EKMRENTFDFNDFIDQLNQVQNMGPMEDLLKMIPGMAGNPALSHIKVDDKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKTMMQGIM 431
>gi|419782775|ref|ZP_14308573.1| signal recognition particle protein [Streptococcus oralis SK610]
gi|383182988|gb|EIC75536.1| signal recognition particle protein [Streptococcus oralis SK610]
Length = 523
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|374376095|ref|ZP_09633753.1| signal recognition particle protein [Niabella soli DSM 19437]
gi|373232935|gb|EHP52730.1| signal recognition particle protein [Niabella soli DSM 19437]
Length = 446
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 157/231 (67%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ D+K +NP E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEVADIKNAVNPQEILFVVDSMTGQDAVNTAKAFNERLDFSGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K KPIK V GE+M+ L+ FYP+RMA RILGMGD+ + VE+AQ+ +E A++++
Sbjct: 260 SIKYTVNKPIKFVSNGEKMDALDVFYPERMAQRILGMGDITTLVERAQQQFDEEQAKKLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
KI FDF DF Q + +MG+M ++GMIPG+G KI + +++S K +EAMI+
Sbjct: 320 SKIRKNKFDFADFKAQLDQIKKMGNMKDLLGMIPGVGAKIKDLDI--SDESFKGIEAMID 377
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER P+++ S RRKR+A SGK +V+ + Q QMR MKN+
Sbjct: 378 SMTPEERSNPDIINGS--RRKRIATGSGKDIAEVNAFMKQFEQMRDMMKNM 426
>gi|390953363|ref|YP_006417121.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
gi|390419349|gb|AFL80106.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
Length = 442
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ DV + +NP E L VVDAMTGQ+A FN ++ G +LTKLDGD+RGGAA+
Sbjct: 200 MMAEIADVHKAINPQETLFVVDAMTGQDAVNTAKAFNEKLNFDGVVLTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ F+P RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVDKPIKFIGTGEKMDAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + V +MGSM ++GMIPG GK V + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLSQIQQVKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER +P ++ S R+KR+A SG + QQV+QL+ Q
Sbjct: 379 MTPTERAQPAVIDGS--RKKRIASGSGTSVQQVNQLLKQF 416
>gi|419495553|ref|ZP_14035271.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|421206749|ref|ZP_15663804.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|421229925|ref|ZP_15686592.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|421292199|ref|ZP_15742934.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|421303453|ref|ZP_15754117.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|421312131|ref|ZP_15762734.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
gi|379595635|gb|EHZ60443.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|395575546|gb|EJG36114.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|395594457|gb|EJG54693.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|395892327|gb|EJH03318.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|395902075|gb|EJH13011.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|395910560|gb|EJH21432.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
Length = 523
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|422731615|ref|ZP_16787973.1| signal recognition particle protein [Enterococcus faecalis TX0645]
gi|422739135|ref|ZP_16794318.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315144939|gb|EFT88955.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315162383|gb|EFU06400.1| signal recognition particle protein [Enterococcus faecalis TX0645]
Length = 472
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|386758321|ref|YP_006231537.1| signal recognition particle protein [Bacillus sp. JS]
gi|384931603|gb|AFI28281.1| signal recognition particle protein [Bacillus sp. JS]
Length = 446
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|350265910|ref|YP_004877217.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|384175339|ref|YP_005556724.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|449094290|ref|YP_007426781.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
gi|349594563|gb|AEP90750.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349598797|gb|AEP86585.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|449028205|gb|AGE63444.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
Length = 446
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|419817930|ref|ZP_14342059.1| signal recognition particle protein [Streptococcus sp. GMD4S]
gi|404465268|gb|EKA10738.1| signal recognition particle protein [Streptococcus sp. GMD4S]
Length = 390
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 69 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 128
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 129 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 188
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 189 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 247
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 248 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 300
>gi|402846973|ref|ZP_10895282.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
gi|402267665|gb|EJU17060.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
Length = 449
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 159/237 (67%), Gaps = 4/237 (1%)
Query: 9 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 68
KR + P+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS++ V K
Sbjct: 208 KRAIRPSETLFVVDSMTGQDAVNTAKTFNERLDFDGVVLTKLDGDTRGGAALSIRTVVDK 267
Query: 69 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 128
PIK VG GE+M+ L+ F+PDRMA RILGMGD++S VE+AQ++ + +A+ ++++I F
Sbjct: 268 PIKFVGMGEKMDALDVFHPDRMADRILGMGDIVSLVERAQQLYDEREAKRLEERIAKDQF 327
Query: 129 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 188
DFNDFL Q + + +MG++ + MIPG+GK + + + K +EAMI +MTPEER K
Sbjct: 328 DFNDFLAQIQQIKKMGNIKDLAAMIPGVGKALK-DIDIKDDAFKSIEAMIYSMTPEERAK 386
Query: 189 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 245
P +L RRKR+A SG + Q V++L+ Q Q R MK L G +GG +P + +
Sbjct: 387 PHILDGH--RRKRIALGSGTSVQDVNKLLTQFTQTRKMMKTLQG-FKGGKMPKMPKI 440
>gi|333904965|ref|YP_004478836.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
gi|333120230|gb|AEF25164.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
Length = 524
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMGELRDVKALAQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+
Sbjct: 262 SVREITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELV 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTP ERE PELL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 382 SMTPTERENPELL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|429724972|ref|ZP_19259833.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
gi|429151434|gb|EKX94302.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
Length = 448
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+E+ VK NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 LMNEIAAVKEATNPDETLFVVDAMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME L+ F+P RMA RILGMGD++S VE+AQE +E+A ++Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKMEALDVFHPSRMADRILGMGDIVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI FDFNDFL Q + + +MG++ + MIPG+GK V ++++ +EA+I +
Sbjct: 320 RKIQKNQFDFNDFLAQLQQIKKMGNIKDLAAMIPGVGKAIK-DVEVDDRAILGVEAIILS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER+ PE+L S R++R+A+ SGKT Q V++L+ Q Q R MK + G
Sbjct: 379 MTPYERQHPEVLNGS--RKERIAKGSGKTVQDVNRLIKQFDQTRKMMKMVSG 428
>gi|16078661|ref|NP_389480.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|221309473|ref|ZP_03591320.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. 168]
gi|221313798|ref|ZP_03595603.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221318722|ref|ZP_03600016.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221322993|ref|ZP_03604287.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321315364|ref|YP_004207651.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|402775843|ref|YP_006629787.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|418033256|ref|ZP_12671733.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|452914716|ref|ZP_21963343.1| signal recognition particle protein [Bacillus subtilis MB73/2]
gi|586037|sp|P37105.1|SRP54_BACSU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|2309080|dbj|BAA21691.1| Ffh [Bacillus subtilis]
gi|2633970|emb|CAB13471.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|320021638|gb|ADV96624.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|351469404|gb|EHA29580.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402481025|gb|AFQ57534.1| Signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|407959004|dbj|BAM52244.1| signal recognition particle-like (SRP) GTPase [Synechocystis sp.
PCC 6803]
gi|407964581|dbj|BAM57820.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
BEST7003]
gi|452117136|gb|EME07531.1| signal recognition particle protein [Bacillus subtilis MB73/2]
Length = 446
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|225856949|ref|YP_002738460.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444388157|ref|ZP_21186147.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444389599|ref|ZP_21187514.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444391435|ref|ZP_21189266.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444395136|ref|ZP_21192682.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444397742|ref|ZP_21195225.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444400272|ref|ZP_21197683.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444402805|ref|ZP_21199956.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444405746|ref|ZP_21202601.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444407359|ref|ZP_21204026.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444410666|ref|ZP_21207190.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444413067|ref|ZP_21209383.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444414317|ref|ZP_21210599.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444417461|ref|ZP_21213498.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444419251|ref|ZP_21215129.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444422413|ref|ZP_21218069.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
gi|225725114|gb|ACO20966.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444250307|gb|ELU56788.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444256062|gb|ELU62400.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444258455|gb|ELU64777.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444260399|gb|ELU66707.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444265804|gb|ELU71793.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444265854|gb|ELU71840.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444266821|gb|ELU72753.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444270955|gb|ELU76706.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444272373|gb|ELU78090.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444273226|gb|ELU78899.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444276885|gb|ELU82417.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444282616|gb|ELU87869.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444283732|gb|ELU88918.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444287298|gb|ELU92231.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444288242|gb|ELU93140.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
Length = 523
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPNLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|340346556|ref|ZP_08669679.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433651816|ref|YP_007278195.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|339611486|gb|EGQ16311.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433302349|gb|AGB28165.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
Length = 454
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K ++P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIASLKETVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+M+ ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMDAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +EA+I +
Sbjct: 320 KKIQKNKFDFNDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIRS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L +S RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERVNPEILNQS--RRLRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|288905279|ref|YP_003430501.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
gi|288732005|emb|CBI13570.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
Length = 521
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 LSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|418164597|ref|ZP_12801267.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
gi|353829458|gb|EHE09589.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
Length = 487
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 166 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 225
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 226 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 285
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 286 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 344
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 345 SSMTPEERENPDLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 161/235 (68%), Gaps = 4/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA L
Sbjct: 201 LMDELKNIKSAVHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ +
Sbjct: 261 SVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+ + F + FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I
Sbjct: 321 ESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 381 TSMTPKERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|29347011|ref|NP_810514.1| signal recognition protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383125386|ref|ZP_09946027.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
gi|29338909|gb|AAO76708.1| putative signal recognition protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837780|gb|EES65870.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
Length = 440
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEITAIKEAINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP ER PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPAERSNPEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|428279192|ref|YP_005560927.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430758979|ref|YP_007209700.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|291484149|dbj|BAI85224.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430023499|gb|AGA24105.1| Signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 446
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|293365278|ref|ZP_06611995.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307703819|ref|ZP_07640760.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|291316728|gb|EFE57164.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307622654|gb|EFO01650.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
Length = 523
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|419431672|ref|ZP_13971812.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|419497447|ref|ZP_14037156.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|421309699|ref|ZP_15760326.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
gi|379600916|gb|EHZ65695.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|379630239|gb|EHZ94829.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|395911120|gb|EJH21989.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
Length = 523
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|347734048|ref|ZP_08867100.1| signal recognition particle protein [Desulfovibrio sp. A2]
gi|347517140|gb|EGY24333.1| signal recognition particle protein [Desulfovibrio sp. A2]
Length = 515
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 161/234 (68%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+L V DAMTGQ+A + +FN + I+G +LTK+DGD+RGGAAL
Sbjct: 200 LMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNAALDISGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKP+K VG GE++ D+E F+PDR+AGRILGMGDV++ +EKAQ ++ E+AEE+
Sbjct: 260 SIRSVTGKPVKFVGMGEKLSDIEVFHPDRVAGRILGMGDVMTLIEKAQSTIKAEEAEELG 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K A FD DF Q R + ++GS+ ++ +IPGMG + ++ EK + +EA+I
Sbjct: 320 RKFQKAEFDLEDFRTQMRRLKKLGSLEGILKLIPGMGALREKLGEMNVPEKEMGRVEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT +ER P++L S RR+R+A SG T Q V+QL+ QMR MK +MG
Sbjct: 380 NSMTMQERRNPKVLNGS--RRQRIAMGSGTTVQDVNQLIKNFEQMREMMKKVMG 431
>gi|342163605|ref|YP_004768244.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
gi|341933487|gb|AEL10384.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
Length = 523
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 161/235 (68%), Gaps = 4/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA L
Sbjct: 201 LMDELKNIKTAVHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ P+K VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ +
Sbjct: 261 SVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+ + F + FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I
Sbjct: 321 ESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTP+ER+ P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 381 TSMTPKERQNPRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|419780220|ref|ZP_14306070.1| signal recognition particle protein [Streptococcus oralis SK100]
gi|383185379|gb|EIC77875.1| signal recognition particle protein [Streptococcus oralis SK100]
Length = 523
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|398304074|ref|ZP_10507660.1| signal recognition particle protein [Bacillus vallismortis DV1-F-3]
Length = 446
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTSVKEIANPEEIFLVVDSMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVREKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|296330813|ref|ZP_06873288.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674331|ref|YP_003866003.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151818|gb|EFG92692.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412575|gb|ADM37694.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 446
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 172/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|162447215|ref|YP_001620347.1| signal recognition particle GTPase [Acholeplasma laidlawii PG-8A]
gi|161985322|gb|ABX80971.1| signal recognition particle GTPase [Acholeplasma laidlawii PG-8A]
Length = 467
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 162/230 (70%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM ELKDVK +L P EVLL VDAM GQEAA + +F+ +IG TG ILTK+DGD+RGGAAL
Sbjct: 200 MMQELKDVKEILKPNEVLLTVDAMMGQEAANVAKSFHDQIGATGVILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E+S PIK GE+M+ LE F+P+RMA RILGMGD+L+ +E+ + +++A+ M
Sbjct: 260 SIREISQIPIKFASSGEKMDSLEAFHPERMASRILGMGDMLTLIEEVTSNIDEDEAKSMM 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+MS ++++ D KQ + + RMGS+S+++G IPG+GK+ A + +K + +I++
Sbjct: 320 EKMMSDSYNYLDLQKQFKMIKRMGSISKILGFIPGLGKMKEALSQVDDKQFDRINVIIQS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER+ PEL+ +S RR+R+A+ +G V++L L Q + MK +
Sbjct: 380 MTEDERKYPELIDKSSKRRQRIAKGAGVEVSDVNRLRDSLVQQKQMMKQM 429
>gi|383939522|ref|ZP_09992681.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
gi|383712576|gb|EID69623.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
Length = 523
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|374997111|ref|YP_004972610.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
gi|357215477|gb|AET70095.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
Length = 453
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K + P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG AL
Sbjct: 199 LMTELREIKSAVKPHEILLVVDAMTGQDAVNVAQSFHSELGLDGVILTKLDGDTRGGGAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G IK VG GE+M+ +E F+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM+
Sbjct: 259 SIKAVTGCTIKFVGIGEKMDAIEAFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +
Sbjct: 319 EKLRKHEFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTARVEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 378 MTKEERRKPVIIKDS--RKKRIAKGSGTSVQDVGRLIKQFEQMQKMMKQF 425
>gi|206890926|ref|YP_002249714.1| signal recognition particle protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742864|gb|ACI21921.1| signal recognition particle protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 440
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK VLNP E+L V DAMTGQ+A + +F+ +IGI G ILTK+DGD+RGGAAL
Sbjct: 200 LMRELQDVKNVLNPHEILFVADAMTGQDAVNIAKSFHEKIGIDGVILTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+KEV+GKPIKL+G GE+++ ++ F+PDR+A RILGMGDVLS +E+AQ+ ++AE+++
Sbjct: 260 SIKEVTGKPIKLIGTGEKIDAIDEFHPDRVANRILGMGDVLSLIEQAQKAYDMKEAEKLK 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F F+D Q R + +MG + ++ M+PG K ++ EK +EA+I +
Sbjct: 320 AKIEKEEFTFDDLKDQIRKMRKMGPIENILSMLPGANKFL-KNIKIDEKEFVKVEAIINS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ P+++ S RR R+A+ SG T V++L+ Q +M+ MK L
Sbjct: 379 MTFEERKNPKIINAS--RRIRIAKGSGTTVTDVNRLIKQFHEMKKMMKQL 426
>gi|149371680|ref|ZP_01891096.1| signal recognition particle protein [unidentified eubacterium
SCB49]
gi|149355307|gb|EDM43867.1| signal recognition particle protein [unidentified eubacterium
SCB49]
Length = 442
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 152/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+++V + + P E L VVDAMTGQ+A TFN I G +LTKLDGD+RGGAA+
Sbjct: 200 MMVEIENVHKAIQPQETLFVVDAMTGQDAVNTAKTFNERINFDGVVLTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDIFYPSRMADRILGMGDVVSLVERAQEQFDEDEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DF+KQ + + +MGSM ++GMIPG GK V + + K +EA+I++
Sbjct: 320 KKIAKNQFGFDDFMKQIQQIKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P L+ S R+KR+A+ SG + QV+QL+ Q
Sbjct: 379 MTPAERTSPALINGS--RKKRIAKGSGTSVTQVNQLLKQF 416
>gi|452991209|emb|CCQ97464.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 157/228 (68%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ + +NP E+LLVVDAMTGQ+A + TFN + ITG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELEGIYNGVNPQEILLVVDAMTGQDAVNVAETFNERLEITGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+++ LEPF+PDRMA RILGMGDVLS +E+AQ + ++ A E++
Sbjct: 261 SIRAVTEKPIKFVGMGEKLDQLEPFHPDRMASRILGMGDVLSLIERAQSSIDEKKALELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI S F +DFL+Q + +G + ++GMIPG+ + EK + ++A+I++
Sbjct: 321 KKIKSQQFTLDDFLEQIDQMKNLGPLDELLGMIPGVNSKALKNLDVNEKDIIKIQAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTP+ER P ++ RRKR+A SG T Q V++L+ Q + MK
Sbjct: 381 MTPQERNDPSIIDSK--RRKRIANGSGTTVQDVNKLLKQFRDTKKMMK 426
>gi|418146492|ref|ZP_12783272.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
gi|353813700|gb|EHD93928.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
Length = 523
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKVLAQPNEILLVVDAMIGQEAADVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|450165643|ref|ZP_21881945.1| signal recognition particle protein [Streptococcus mutans B]
gi|449240476|gb|EMC39151.1| signal recognition particle protein [Streptococcus mutans B]
Length = 516
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GV+ G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVISG 433
>gi|138894717|ref|YP_001125170.1| Signal recognition particle subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
gi|134266230|gb|ABO66425.1| Signal recognition particle, subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
Length = 455
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 161/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 211 LMDELKQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 270
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 271 SIRAVTGAPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 330
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ +A F F+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I
Sbjct: 331 QKMRTATFTFDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIR 390
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 391 SMTKEEKMHPEIINGS--RKKRIAKGSGTTVQEVNRLLKQF 429
>gi|357238847|ref|ZP_09126183.1| signal recognition particle protein [Streptococcus ictaluri 707-05]
gi|356752569|gb|EHI69694.1| signal recognition particle protein [Streptococcus ictaluri 707-05]
Length = 520
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMSELRDVKELAQPNEILLVVDSMIGQEAANVAAEFNRQLNITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKDIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT ERE PELL +P RR+R+A SG + +V++ + Q ++ M+ GVM G
Sbjct: 382 SMTLAERENPELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKMMMQ---GVMSG 433
>gi|198275694|ref|ZP_03208225.1| hypothetical protein BACPLE_01869 [Bacteroides plebeius DSM 17135]
gi|198271323|gb|EDY95593.1| signal recognition particle protein [Bacteroides plebeius DSM
17135]
Length = 443
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 157/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ +NP L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIEAIKKAINPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPI VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPIMFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNQFDFNDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTPEER PE+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPEERTHPEIL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|315613041|ref|ZP_07887952.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
gi|315315151|gb|EFU63192.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
Length = 523
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|313203704|ref|YP_004042361.1| signal recognition particle subunit ffh/srp54 (srp54) [Paludibacter
propionicigenes WB4]
gi|312443020|gb|ADQ79376.1| signal recognition particle subunit FFH/SRP54 (srp54) [Paludibacter
propionicigenes WB4]
Length = 439
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 156/239 (65%), Gaps = 5/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPQEILFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ FYP+RMA RILGMGD++S VE+AQE +EDA +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKMDALDVFYPERMADRILGMGDIVSLVERAQEQYDEEDARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+I FDFNDF+ Q + + +MG++ + MIPGMGK V + + K +EA+I +
Sbjct: 320 KRIAKNQFDFNDFISQIQQIKKMGNIKDLAAMIPGMGK-ALKDVDIDDNAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MTP ER P +L S R++R+A SG T V++L+ Q Q MK M M G L
Sbjct: 379 MTPLERANPAMLNGS--RKQRIAAGSGTTIVDVNRLLKQFDQTSKMMK--MATMSQGKL 433
>gi|408370475|ref|ZP_11168252.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
gi|407744233|gb|EKF55803.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
Length = 442
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 150/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ +NP E L VVD+MTGQ+A +FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMKEISNIHNAINPNETLFVVDSMTGQDAVNTAKSFNDVLDFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAVDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLH 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKDQFGFDDFLSQIQQIKKMGSMKDLLGMIPGAGKALKGMDID-DDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER P +L S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 379 MTPEERSTPSVLNGS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|421452536|ref|ZP_15901897.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
gi|400182967|gb|EJO17229.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
Length = 520
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELHDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|429205348|ref|ZP_19196625.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
gi|428146420|gb|EKW98659.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
Length = 479
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 158/227 (69%), Gaps = 7/227 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL ++ + P E+LL VDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMAELAQIEELAQPDEILLTVDAMTGQNAVEVAQGFNDQLNITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G+GE+M+DL+ FYPDRMA RILGMGD+L+ +EKAQ E A++++
Sbjct: 262 SIRAVTGKPIKFIGQGEKMDDLDVFYPDRMASRILGMGDMLTLIEKAQRDYDAEKAKKLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AM 177
+K+ FDFNDFL Q + MGS+ +I MIPG+ PA ++ A K ME A+
Sbjct: 322 EKMRENTFDFNDFLDQMNQIQNMGSLQDIIKMIPGLAN-NPA-LKNANIDPKDMERTKAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+ +MT ERE P+LL +P RR+R+A SG+ Q+V++++ Q QMR
Sbjct: 380 VYSMTKAERENPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR 424
>gi|406658389|ref|ZP_11066529.1| signal recognition particle protein [Streptococcus iniae 9117]
gi|405578604|gb|EKB52718.1| signal recognition particle protein [Streptococcus iniae 9117]
Length = 523
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGDSRGGAAL
Sbjct: 202 LMGELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLNITGVVLTKIDGDSRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQKSMELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G A ++ +K + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDDKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MT ERE P+LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 382 SMTKAERENPDLL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQGMM 431
>gi|410476692|ref|YP_006743451.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
gi|406369637|gb|AFS43327.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
Length = 487
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 166 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 225
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 226 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 285
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 286 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 344
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 345 SSMTPEERENPNLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|392390806|ref|YP_006427409.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
gi|390521884|gb|AFL97615.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
Length = 446
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+++V + + PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMQEIRNVHQAIKPTETLFVVDSMTGQDAVNTAKAFNEVLDYDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+++ V KPIK + GE+++ L+ F+P RMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 TIRTVVDKPIKFISTGEKLDKLDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFLKQ + + RMG+M ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNKFDFNDFLKQIKQIKRMGNMKDLLGMIPGAGKALKG-IEIDDDAFKHVEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ERE P ++ S R++R+A+ G++ Q V+QL+ Q QM MK
Sbjct: 379 MTNQERENPNIIDAS--RKRRIARGCGRSVQDVNQLLKQFSQMGKMMK 424
>gi|322373056|ref|ZP_08047592.1| signal recognition particle protein [Streptococcus sp. C150]
gi|321278098|gb|EFX55167.1| signal recognition particle protein [Streptococcus sp. C150]
Length = 520
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 6/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELHDIKNFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 235
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+++M G ME
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQSVMSGDME 436
>gi|292670609|ref|ZP_06604035.1| signal recognition particle protein [Selenomonas noxia ATCC 43541]
gi|292647775|gb|EFF65747.1| signal recognition particle protein [Selenomonas noxia ATCC 43541]
Length = 458
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 159/224 (70%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDASLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPLKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL Q + V ++GS+S ++GMIPGMG K+ ++ K ++ +EA
Sbjct: 320 EKLRRNDFTLDDFLDQMQQVKKLGSLSNILGMIPGMGGLKKKLGDQEIDLDGKEMRRIEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 380 IIRAMTPKERTDITIINGS--RRKRIAAGSGTRVQDVNKLLKQF 421
>gi|401683368|ref|ZP_10815254.1| signal recognition particle protein [Streptococcus sp. BS35b]
gi|400187446|gb|EJO21640.1| signal recognition particle protein [Streptococcus sp. BS35b]
Length = 523
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|419815236|ref|ZP_14339876.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
gi|404468856|gb|EKA13721.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
Length = 328
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 7 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 66
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 67 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 126
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 127 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 185
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 186 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 238
>gi|419818361|ref|ZP_14342410.1| signal recognition particle protein [Streptococcus sp. GMD4S]
gi|404463324|gb|EKA08999.1| signal recognition particle protein [Streptococcus sp. GMD4S]
Length = 390
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 69 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 128
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 129 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 188
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 189 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 247
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 248 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 300
>gi|224539094|ref|ZP_03679633.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519284|gb|EEF88389.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
Length = 439
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|406670909|ref|ZP_11078154.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
gi|405582425|gb|EKB56431.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
Length = 486
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K + P ++LL +DAMTGQ+A + FN ++ ITG ++TKLDGD+RGGAAL
Sbjct: 202 LMEELQNIKAAVQPHDILLTIDAMTGQDAVNVAKAFNDDLDITGIVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ + KPIK G+GE+++ LE FYPDRMAGRILGMGD+++ +EKAQ+ +E+A +M
Sbjct: 262 SIRSIINKPIKFTGQGEQLDALELFYPDRMAGRILGMGDMMTLIEKAQQDFDEEEAAKMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
K+ A+FDFNDF+ Q V +MG + ++ +IPGM KI + +KS+ + A+++
Sbjct: 322 DKLKDASFDFNDFINQMDQVRKMGPIKDLMKLIPGMSKIPGLDDFDIDDKSMNRIRAVVQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTP ERE P+++++S RRKR+A G+ ++QL+ Q Q R MK + GG
Sbjct: 382 SMTPYERENPDVISQS--RRKRIAAGCGQPLNDINQLIKQFNQSREMMKQMSNGRMGG 437
>gi|196247664|ref|ZP_03146366.1| signal recognition particle protein [Geobacillus sp. G11MC16]
gi|196212448|gb|EDY07205.1| signal recognition particle protein [Geobacillus sp. G11MC16]
Length = 433
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 161/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK ++ + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 189 LMDELKQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 248
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 249 SIRAVTGAPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 308
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ +A F F+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I
Sbjct: 309 QKMRTATFTFDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIR 368
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 369 SMTKEEKMHPEIINGS--RKKRIAKGSGTTVQEVNRLLKQF 407
>gi|295135662|ref|YP_003586338.1| signal recognition particle protein [Zunongwangia profunda SM-A87]
gi|294983677|gb|ADF54142.1| signal recognition particle protein [Zunongwangia profunda SM-A87]
Length = 442
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 152/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHTAIEPHETLFVVDSMTGQDAVNTAKAFNDRLDFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + + +MGSM ++GMIPG GK+ V + + K +EA+I +
Sbjct: 320 KKIAKNAFGFDDFLKQLQQIKKMGSMKDLLGMIPGAGKMLK-DVDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P+++ S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 379 MTPDERSTPKIINSS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|373495378|ref|ZP_09585963.1| signal recognition particle protein [Eubacterium infirmum F0142]
gi|371964856|gb|EHO82360.1| signal recognition particle protein [Eubacterium infirmum F0142]
Length = 447
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 163/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+LLVVDA+TGQ+A FN ++GI G I+TK+DGDSRGGAAL
Sbjct: 201 LMEELASMKSAVRPHEILLVVDALTGQDAVNAADGFNRKLGIDGIIMTKMDGDSRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S K+V+GKPIK +G GE+ + LEPF+P+R+A RILGMGD+LS +EKA++ +E AE+++
Sbjct: 261 SAKKVTGKPIKFLGTGEKSDALEPFHPERLASRILGMGDMLSLIEKAEQAYDEEQAEKLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+KI F DFL+Q V +MG +++++ M+PGMG KI+ A + + EK + MEA+I
Sbjct: 321 RKIRKNQFTLEDFLEQMGQVRKMGGLAKIMDMLPGMGGAKISEADIEKGEKEFRTMEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT ER+ P LL S RRKR+A SG+T V++++++ + + MK
Sbjct: 381 RSMTVAERKNPGLLNAS--RRKRIAAGSGQTVNSVNKVISKYEESKKLMKQF 430
>gi|189467237|ref|ZP_03016022.1| hypothetical protein BACINT_03622 [Bacteroides intestinalis DSM
17393]
gi|189435501|gb|EDV04486.1| signal recognition particle protein [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|116618655|ref|YP_819026.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097502|gb|ABJ62653.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 491
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 5/230 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 GSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|418975192|ref|ZP_13523101.1| signal recognition particle protein [Streptococcus oralis SK1074]
gi|383348563|gb|EID26522.1| signal recognition particle protein [Streptococcus oralis SK1074]
Length = 523
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|255505348|ref|ZP_05345603.3| signal recognition particle protein [Bryantella formatexigens DSM
14469]
gi|255268496|gb|EET61701.1| signal recognition particle protein [Marvinbryantia formatexigens
DSM 14469]
Length = 451
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 159/235 (67%), Gaps = 4/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL +K ++ + +LVVDAMTGQ+A + FN +IGI G ILTKLDGDSRGGAAL
Sbjct: 204 MMDELVQIKEAVHVDQTILVVDAMTGQDAVNVSEMFNEKIGIDGVILTKLDGDSRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ GKPI VG GE++ DLE FYPDRMA RILGMGDV+S +EKAQ + + A+E++
Sbjct: 264 SIRATCGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVMSLIEKAQATLDENKAKELE 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+KI A F F+D+L+ + MG +S ++ M+PGMG K+ + EK+L EA+I
Sbjct: 324 QKIKKAKFGFDDYLESMNQMKNMGGLSGILSMMPGMGGSKMKNLEGMIDEKALARNEAII 383
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MTPEER P++L +P R+KR+A G +V++LV Q Q R MK + G+
Sbjct: 384 LSMTPEERANPDIL--NPSRKKRIAAGCGVDIAEVNRLVKQFEQTRKMMKQIPGM 436
>gi|423222601|ref|ZP_17209071.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
gi|392641888|gb|EIY35661.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
Length = 439
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|218132452|ref|ZP_03461256.1| hypothetical protein BACPEC_00311 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992562|gb|EEC58564.1| signal recognition particle protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 452
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 165/240 (68%), Gaps = 7/240 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+++K + + +LVVD+MTGQ+A + ++F+ +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMTELQNIKSSVGVDQTILVVDSMTGQDAVNVASSFDEKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G GE++ DLE F+PDRMA RILGMGDVLS +EKA+ + + A EM+
Sbjct: 262 SIKAVTGKPILYAGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEAQIDADKAAEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIME 175
KK+ A FDFND+L+ + MG + ++ M+PGMG K + EAEK+LK E
Sbjct: 322 KKLRKAEFDFNDYLEYMGQIKNMGGLGSIMNMLPGMGFAGKIKTDGVDMDEAEKNLKRTE 381
Query: 176 AMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 235
A+I +M ER +P++L +P R+ R+A+ +G +V+++V Q QM+ MK + G+M+
Sbjct: 382 AIILSMNNAERSRPDIL--NPSRKNRIARGAGVDISEVNRVVKQFEQMKKMMKQMPGMMK 439
>gi|86133270|ref|ZP_01051852.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
gi|85820133|gb|EAQ41280.1| signal recognition 54 kDa protein (SRP54) [Polaribacter sp. MED152]
Length = 442
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 150/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISNIHKAITPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYPDRMA RILGMGDV+S VE+AQ+ +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPDRMADRILGMGDVISLVERAQDQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK V + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLNQIQQIKKMGSMKDLVGMIPGAGKAMK-DVDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER P + S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 379 MTPKERSTPSTINAS--RKKRIAKGSGTSIQEVNQLMKQF 416
>gi|427386247|ref|ZP_18882444.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
gi|425726287|gb|EKU89152.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
Length = 439
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKKAINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ER P LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPAERSNPALLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|381337033|ref|YP_005174808.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
gi|356644999|gb|AET30842.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
Length = 491
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 5/230 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLNAKQFAHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 GSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|144898174|emb|CAM75038.1| Signal recognition particle GTPase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 455
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+ V+ V P E LLVVDAM GQ+A L FN ++G+TG +LT++DGDSRGGAAL
Sbjct: 200 LMAEVAAVRDVAKPVETLLVVDAMIGQDAVTLAHEFNEKVGVTGMVLTRVDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G+PIK +G GE++E LEPF+PDR+AGRILGMGDV+S VEKA E ++Q++AE++
Sbjct: 260 SMRAVTGRPIKFLGMGEKLEALEPFHPDRLAGRILGMGDVVSLVEKAMENIEQDEAEKLA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIM---EAM 177
K+I FD ND L Q + V +MG + +IGM+PG+GK+ Q+++A+ K++ +A+
Sbjct: 320 KRIEKGKFDLNDMLSQFKQVEKMGDLKGIIGMLPGLGKMAN-QLKDAKIDDKMVGRQKAV 378
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT ER+ P+L+ S R+KR+A SG + Q V++L+ Q QM MK +
Sbjct: 379 ILSMTLAERKNPDLIKAS--RKKRIAAGSGVSVQDVNKLLKQYQQMADVMKKV 429
>gi|210615865|ref|ZP_03290827.1| hypothetical protein CLONEX_03046 [Clostridium nexile DSM 1787]
gi|210150068|gb|EEA81077.1| hypothetical protein CLONEX_03046 [Clostridium nexile DSM 1787]
Length = 449
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 164/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+++K + + +LVVDAMTGQ+A + ++FN +IGI G I+TKLDGD+RGGAAL
Sbjct: 202 MMAELQEIKETVTVHQTILVVDAMTGQDAVNVASSFNEKIGIDGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVLS +EK E + +E A+EM
Sbjct: 262 SIKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLSLIEKVGEDIDEEKAKEMS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMI 178
+K+ A FDF D+L+ + + +MG ++ ++ M+PG+G K+ E+EK + +E++I
Sbjct: 322 QKLKKAQFDFEDYLESMKQMKKMGGLANIMSMMPGLGGAKMKDIDSEESEKKMAQIESII 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER P++L +P R++R+A+ +G +V++LV Q Q + MK L
Sbjct: 382 YSMTIKERRNPDIL--NPSRKRRIAKGAGVDISEVNRLVKQFEQSKKMMKQL 431
>gi|419707043|ref|ZP_14234549.1| Signal recognition particle protein [Streptococcus salivarius PS4]
gi|383283283|gb|EIC81241.1| Signal recognition particle protein [Streptococcus salivarius PS4]
Length = 520
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|219849542|ref|YP_002463975.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
gi|219543801|gb|ACL25539.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
Length = 450
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 164/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ ++ ++PTE LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAAL
Sbjct: 200 LMQELEQIEARVHPTERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 118
SV+ V+G PIK + GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++
Sbjct: 260 SVRAVTGVPIKFLSTGEKVDGNTLEIFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKK 319
Query: 119 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMI 178
MQK++ FDF DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I
Sbjct: 320 MQKRLSKGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER PE++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 380 YSMTPEERRHPEIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|402574098|ref|YP_006623441.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
gi|402255295|gb|AFQ45570.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAAL
Sbjct: 199 LMGELRDIKGSVKPHEILLVVDAMTGQDAVNVAESFHGDLGLDGVILTKLDGDTRGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G IK +G GE+M+ LE F+PDRMA RILGMGDVL+ +EKAQE ++ A+EM+
Sbjct: 259 SIKAVTGCTIKFIGLGEKMDALEAFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEME 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MG +S ++ MIPG+GK V EK +EA+I +
Sbjct: 319 QKLRKQEFTLDDFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVNIDEKDTAHIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER KP ++ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 378 MTTEERRKPAIIKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|298207766|ref|YP_003715945.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
gi|83850404|gb|EAP88272.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
Length = 442
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEISNIHKAIQPQETLFVVDSMTGQDAVNTAKAFNDTLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVDKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + V +MGSM ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQIQQVKKMGSMKDLMGMIPGAGK-MMKDIDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER P ++ S R+KRVA+ SG + Q+V+QL+ Q
Sbjct: 379 MTPEERSNPSIINSS--RKKRVAKGSGTSVQEVNQLLKQF 416
>gi|148994098|ref|ZP_01823438.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489114|ref|ZP_02713313.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|418125923|ref|ZP_12762831.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|418191839|ref|ZP_12828342.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|418214472|ref|ZP_12841207.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|418234483|ref|ZP_12861061.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|419484511|ref|ZP_14024287.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|419508354|ref|ZP_14048007.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|421294078|ref|ZP_15744801.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|421301149|ref|ZP_15751819.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
gi|147927451|gb|EDK78480.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572579|gb|EDT93107.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|353796704|gb|EHD77043.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|353856912|gb|EHE36879.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|353871755|gb|EHE51626.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|353887774|gb|EHE67551.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|379584022|gb|EHZ48899.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|379612072|gb|EHZ76794.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|395894368|gb|EJH05348.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|395898709|gb|EJH09653.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
Length = 523
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVCHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|300361928|ref|ZP_07058105.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
gi|300354547|gb|EFJ70418.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
Length = 476
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 167/247 (67%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK V V +P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAAL
Sbjct: 201 LMNELKRVTAVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PI G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M
Sbjct: 261 SIRAVTGLPIIFTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++
Sbjct: 321 EKMRENTFDFNDFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIV 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P++L +P RR+R+A SG++ +V++++ Q Q K +M M G
Sbjct: 380 YSMTPEERENPDIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGD 433
Query: 239 LPALSNL 245
+ +NL
Sbjct: 434 MGEFANL 440
>gi|429738313|ref|ZP_19272125.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
gi|429160509|gb|EKY02970.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
Length = 450
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K + P E L VVD+MTGQ+A FN + I G ILTKLDGD+RGGAAL
Sbjct: 200 MMDEISRLKTFVQPDETLFVVDSMTGQDAVNTAREFNERLDIDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME L+ FYP RMA RILGMGD++S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVDKPIKFVGTGEKMEALDVFYPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL+Q + +MG++ + MIPG+GK + + K +EA+I++
Sbjct: 320 KKIQKNKFDFNDFLQQIEQIKKMGNLKDLASMIPGVGK-AIKDADIDDDAFKGVEAIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER P++L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPDILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTG 428
>gi|450159193|ref|ZP_21879300.1| signal recognition particle protein [Streptococcus mutans 66-2A]
gi|449241479|gb|EMC40105.1| signal recognition particle protein [Streptococcus mutans 66-2A]
Length = 516
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG M ++ MIPGM + + V+ E + A++
Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 382 SMTPAERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|402308286|ref|ZP_10827295.1| signal recognition particle protein [Prevotella sp. MSX73]
gi|400375730|gb|EJP28625.1| signal recognition particle protein [Prevotella sp. MSX73]
Length = 447
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++
Sbjct: 320 KKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 379 MTPKERSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|419766060|ref|ZP_14292277.1| signal recognition particle protein [Streptococcus mitis SK579]
gi|383354438|gb|EID32001.1| signal recognition particle protein [Streptococcus mitis SK579]
Length = 523
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|300772045|ref|ZP_07081915.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760348|gb|EFK57174.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 445
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+ VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 LMVEITAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKALK-DVEVDDNAFKPIEAIIDS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ERE P+ + + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 379 MTPFERENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|229098314|ref|ZP_04229261.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|229104407|ref|ZP_04235076.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|229117331|ref|ZP_04246709.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|407706304|ref|YP_006829889.1| hypothetical protein MC28_3068 [Bacillus thuringiensis MC28]
gi|423378316|ref|ZP_17355600.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|423441424|ref|ZP_17418330.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|423448350|ref|ZP_17425229.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|423464498|ref|ZP_17441266.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|423533840|ref|ZP_17510258.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|423540891|ref|ZP_17517282.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|423547129|ref|ZP_17523487.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|423615894|ref|ZP_17591728.1| signal recognition particle protein [Bacillus cereus VD115]
gi|423623079|ref|ZP_17598857.1| signal recognition particle protein [Bacillus cereus VD148]
gi|228666231|gb|EEL21695.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|228679105|gb|EEL33313.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|228685212|gb|EEL39143.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|401128944|gb|EJQ36627.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|401172079|gb|EJQ79300.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|401178850|gb|EJQ86023.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|401259852|gb|EJR66026.1| signal recognition particle protein [Bacillus cereus VD148]
gi|401260431|gb|EJR66604.1| signal recognition particle protein [Bacillus cereus VD115]
gi|401636582|gb|EJS54336.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|402418085|gb|EJV50385.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|402420765|gb|EJV53036.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|402464059|gb|EJV95759.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|407383989|gb|AFU14490.1| Signal recognition particle protein [Bacillus thuringiensis MC28]
Length = 449
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 166/233 (71%), Gaps = 7/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVANPDEIFLVVDAMTGQDAVNVAQSFHDQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK +
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTM 430
>gi|30263848|ref|NP_846225.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47529273|ref|YP_020622.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186695|ref|YP_029947.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227813247|ref|YP_002813256.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229602210|ref|YP_002868082.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|254683447|ref|ZP_05147307.1| signal recognition particle protein [Bacillus anthracis str.
CNEVA-9066]
gi|254721376|ref|ZP_05183165.1| signal recognition particle protein [Bacillus anthracis str. A1055]
gi|254735883|ref|ZP_05193589.1| signal recognition particle protein [Bacillus anthracis str.
Western North America USA6153]
gi|254739516|ref|ZP_05197213.1| signal recognition particle protein [Bacillus anthracis str. Kruger
B]
gi|254751176|ref|ZP_05203215.1| signal recognition particle protein [Bacillus anthracis str.
Vollum]
gi|254756724|ref|ZP_05208753.1| signal recognition particle protein [Bacillus anthracis str.
Australia 94]
gi|386737667|ref|YP_006210848.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|421639600|ref|ZP_16080191.1| signal recognition particle protein [Bacillus anthracis str. BF1]
gi|30258492|gb|AAP27711.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47504421|gb|AAT33097.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180622|gb|AAT55998.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227003495|gb|ACP13238.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229266618|gb|ACQ48255.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|384387519|gb|AFH85180.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|403393265|gb|EJY90510.1| signal recognition particle protein [Bacillus anthracis str. BF1]
Length = 449
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|404451671|ref|ZP_11016629.1| signal recognition particle protein [Indibacter alkaliphilus LW1]
gi|403762594|gb|EJZ23640.1| signal recognition particle protein [Indibacter alkaliphilus LW1]
Length = 445
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 166/247 (67%), Gaps = 8/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEGLKNALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +++A+ +
Sbjct: 259 SIRHVVNKPIKYISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQTFDEDEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q + +MG++ ++GMIPGMGK + + S + +EA+I +
Sbjct: 319 SKIRKNQFNFDDFLSQLEQIKKMGNIKDLMGMIPGMGKAMKG-LDIDDDSFRPIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME--- 235
MTP ERE P+++ S RRKR+A SG++ Q+V+ L+ Q MR MK N MG +
Sbjct: 378 MTPMERENPDVIDGS--RRKRIADGSGRSIQEVNNLMKQFADMRKLMKQMNKMGGAQKAL 435
Query: 236 GGSLPAL 242
GG LP +
Sbjct: 436 GGMLPKM 442
>gi|227432057|ref|ZP_03914071.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352174|gb|EEJ42386.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 491
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 5/230 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIAEIADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTPEERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 GSMTPEERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|251797472|ref|YP_003012203.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
gi|247545098|gb|ACT02117.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
Length = 462
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 163/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + + + P EVLLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMEELKQIHQNVKPDEVLLVVDAMTGQDAVNVAQSFHEQLELTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK GE+++ LEPF+PDRMA RILGMGD+LS +EKAQ + + A EM+
Sbjct: 262 SVKAVTGKPIKFAAMGEKIDALEPFHPDRMASRILGMGDMLSLIEKAQANIDADKAAEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI--TPAQVREAEKSLKIMEAMI 178
+K+ +A F F+DFL+Q + +G + +++ M+PGM K+ ++ EK + +EA++
Sbjct: 322 RKMRTAEFTFDDFLEQMAQIRNLGPLDQLMDMLPGMNKMKGNMKDMKVDEKQINRVEAIV 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++KPELL S RRKRVA SG + +V++L+ Q MR MK
Sbjct: 382 RSMTKAEKQKPELLNHS--RRKRVAAGSGTSITEVNRLIKQFEDMRKMMKQF 431
>gi|374853169|dbj|BAL56084.1| signal recognition particle subunit FFH/SRP54 [uncultured
Acidobacteria bacterium]
Length = 456
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 158/237 (66%), Gaps = 9/237 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +KR P EVL V DAMTGQ+A F+ IGI+G ILTK+DGD+RGGAAL
Sbjct: 200 LMAELEAIKRETRPVEVLFVADAMTGQDAVRSAEEFHRRIGISGVILTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G+PIK +G GE+ + LEPFYPDRMA RILGMGDVLS +E+ Q + + +A Q
Sbjct: 260 SIKAVTGQPIKFIGVGEKADALEPFYPDRMASRILGMGDVLSLIERVQAEVDEREAARWQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP-------GMGKITPAQVREAEKSLKI 173
+K+ F DFL+Q R R GS+ ++ ++P G+G++TP Q+ + E+ LK
Sbjct: 320 EKLRREEFTLEDFLEQLRLAKRFGSVGKLFELLPAEMLKIVGVGRLTPEQMAQFERQLKR 379
Query: 174 MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
EA+I +MTPEER L+ S RR+R+A+ SG T ++V+ L+ Q +MR MK L
Sbjct: 380 AEAIINSMTPEERRNYRLIDGS--RRRRIARGSGTTVEEVNALLKQYVEMRQMMKRL 434
>gi|407768696|ref|ZP_11116074.1| Signal recognition particle subunit FFH/SRP54 (Srp54)
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288380|gb|EKF13858.1| Signal recognition particle subunit FFH/SRP54 (Srp54)
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 494
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 172/263 (65%), Gaps = 20/263 (7%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+ V+ +NP E LLV DAMTGQ++ + F ++GITG +LT++DGD+RGGAAL
Sbjct: 200 LMSEVAQVRDAVNPAETLLVTDAMTGQDSVNVAKEFADKVGITGIVLTRIDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++G PIK++G GE+++++E F+PDR+A RILGMGDV+S VEKA E ++QEDAE+M
Sbjct: 260 SMRQITGCPIKMLGTGEKIDEMEAFHPDRIANRILGMGDVVSLVEKAAETIKQEDAEKMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK+ FD ND L Q + + +MG +S ++GM+PGMG + +Q + K L EA+I
Sbjct: 320 KKLAKGQFDLNDLLSQLKQLQKMGDLSGIMGMLPGMGALKKQMSQTKLDPKLLTHQEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNL 230
+MTP+ERE P L+ S R+KR+A G + Q V++L+ Q M K L
Sbjct: 380 LSMTPKERENPALIKAS--RKKRIAAGCGLSVQDVNKLLKQYQTMSTMIKKMGKMGKKGL 437
Query: 231 MG--------VMEGGSLPALSNL 245
G ++EGG +P +S L
Sbjct: 438 FGGMPKMDPSMLEGGDMPDMSKL 460
>gi|222097290|ref|YP_002531347.1| signal recognition particle protein [Bacillus cereus Q1]
gi|221241348|gb|ACM14058.1| signal recognition particle protein [Bacillus cereus Q1]
Length = 449
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAQVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|302670925|ref|YP_003830885.1| signal recognition particle protein Ffh [Butyrivibrio
proteoclasticus B316]
gi|302395398|gb|ADL34303.1| signal recognition particle protein Ffh [Butyrivibrio
proteoclasticus B316]
Length = 457
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL D+K + + LLVVDAMTGQEA + + FN ++G+ G IL+K+DGDSRGGAAL
Sbjct: 202 MMQELVDIKNAVGVHQTLLVVDAMTGQEAVNVASEFNEKVGVDGIILSKMDGDSRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE--- 117
S K V+GKPI VG GE++ DLE FYPDRMA RILGMGDVLS ++KA E + DAE
Sbjct: 262 STKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLSLIDKAVEANAERDAEKDR 321
Query: 118 EMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAM 177
EM +K+ DF +L+ + + MG +S ++GM+PGMGKI+ + + EK L +EA+
Sbjct: 322 EMAQKMKKGKIDFEMYLESMKAMRNMGGLSSIMGMLPGMGKISDDMLPD-EKQLARIEAI 380
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+ +MTPEER+ P+L+ SP R+ R+A+ SG V++ + Q QM+ MK + G+M
Sbjct: 381 VLSMTPEERKNPKLM--SPQRKFRIAKGSGNDIADVNRFIKQFEQMQKMMKQMPGLM 435
>gi|377809757|ref|YP_005004978.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
gi|361056498|gb|AEV95302.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
Length = 476
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 160/233 (68%), Gaps = 6/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADIKALAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGIVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIKLVG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q + ++ A EM
Sbjct: 262 SIRAVTGKPIKLVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQRDVDEKQAAEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI FDFNDF+ Q V MG M ++ MIPGM PA + K ++ +A+I
Sbjct: 322 DKIRENTFDFNDFVDQLVQVQNMGPMEDIMKMIPGMAN-NPAMKNMNVNPKDIEHTKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MT ERE P++L +P RR+R+A SG+ +V++++ Q QM+ +M N M
Sbjct: 381 YSMTAAEREDPDIL--NPSRRRRIAAGSGQPVVEVNRMIKQFNQMK-KMMNQM 430
>gi|42782937|ref|NP_980184.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49478411|ref|YP_037906.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141643|ref|YP_085186.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118479067|ref|YP_896218.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217961265|ref|YP_002339833.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218904975|ref|YP_002452809.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225865826|ref|YP_002751204.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228916482|ref|ZP_04080048.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935159|ref|ZP_04097986.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947564|ref|ZP_04109854.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228986988|ref|ZP_04147114.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229092887|ref|ZP_04224021.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|229123359|ref|ZP_04252563.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|229157421|ref|ZP_04285499.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|229186085|ref|ZP_04313254.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|229197955|ref|ZP_04324670.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|301055335|ref|YP_003793546.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|375285768|ref|YP_005106207.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|376267740|ref|YP_005120452.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|384181658|ref|YP_005567420.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402556034|ref|YP_006597305.1| signal recognition particle protein [Bacillus cereus FRI-35]
gi|423353547|ref|ZP_17331174.1| signal recognition particle protein [Bacillus cereus IS075]
gi|423374358|ref|ZP_17351696.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|423550406|ref|ZP_17526733.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|423567260|ref|ZP_17543507.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|423574549|ref|ZP_17550668.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|423604528|ref|ZP_17580421.1| signal recognition particle protein [Bacillus cereus VD102]
gi|42738864|gb|AAS42792.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49329967|gb|AAT60613.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975112|gb|AAU16662.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118418292|gb|ABK86711.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217066657|gb|ACJ80907.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218538723|gb|ACK91121.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225787793|gb|ACO28010.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228585534|gb|EEK43637.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|228597261|gb|EEK54912.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|228626148|gb|EEK82897.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|228660135|gb|EEL15771.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|228690509|gb|EEL44292.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|228772766|gb|EEM21206.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228812084|gb|EEM58415.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824524|gb|EEM70329.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843061|gb|EEM88143.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377504|gb|ADK06408.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|324327742|gb|ADY23002.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358354295|dbj|BAL19467.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|364513540|gb|AEW56939.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|401089360|gb|EJP97531.1| signal recognition particle protein [Bacillus cereus IS075]
gi|401094270|gb|EJQ02352.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|401190022|gb|EJQ97072.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|401212074|gb|EJR18820.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|401214348|gb|EJR21078.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|401245148|gb|EJR51506.1| signal recognition particle protein [Bacillus cereus VD102]
gi|401797244|gb|AFQ11103.1| signal recognition particle protein [Bacillus cereus FRI-35]
Length = 449
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|167758974|ref|ZP_02431101.1| hypothetical protein CLOSCI_01320 [Clostridium scindens ATCC 35704]
gi|167663381|gb|EDS07511.1| signal recognition particle protein [Clostridium scindens ATCC
35704]
Length = 449
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 158/227 (69%), Gaps = 9/227 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL ++K +N + +LV+DAMTGQ+A + FN +IG+ G I+TKLDGD+RGGAAL
Sbjct: 202 MMAELAEIKEAVNVHQTILVIDAMTGQDAVNVAKEFNEKIGVDGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA+ + +E A++M
Sbjct: 262 SVKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAEAEIDEEKAKQMS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP----GMGK---ITPAQVREAEKSLKI 173
+K+ A FDF D+L+ + + MG + ++ M+P GMGK + Q +AEK++
Sbjct: 322 QKLKKAQFDFEDYLESVKQMKNMGGLGSIMSMMPALGAGMGKMKDLDEDQTAQAEKNMAR 381
Query: 174 MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MEAMI +MTPEER P+LL +P R+ R+A+ +G +V+++V Q
Sbjct: 382 MEAMIYSMTPEERRNPDLL--NPSRKHRIARGAGVDISEVNRMVKQF 426
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E + +K L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAAL
Sbjct: 202 MMAEAEALKNALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + + A EMQ
Sbjct: 262 SIRQVVEKPIKFISIGEKVDDLDIFYPDRMAQRILGMGDIISFVEKAQENLDLDKAIEMQ 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+M FD NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +
Sbjct: 322 KKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMVPKQELE-NLDFKPIEAMISS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT EER PE++ S RR+R+A+ SG+ Q+V+ L+ Q +M+ MK
Sbjct: 381 MTKEERSNPEMINGS--RRQRIARGSGRKVQEVNLLLKQFGEMKKMMK 426
>gi|336422979|ref|ZP_08603118.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
gi|336006825|gb|EGN36857.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
Length = 449
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 158/227 (69%), Gaps = 9/227 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL ++K +N + +LV+DAMTGQ+A + FN +IG+ G I+TKLDGD+RGGAAL
Sbjct: 202 MMAELAEIKEAVNVHQTILVIDAMTGQDAVNVAKEFNEKIGVDGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPI VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA+ + +E A++M
Sbjct: 262 SVKAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLALIEKAEAEIDEEKAKQMS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP----GMGK---ITPAQVREAEKSLKI 173
+K+ A FDF D+L+ + + MG + ++ M+P GMGK + Q +AEK++
Sbjct: 322 QKLKKAQFDFEDYLESVKQMKNMGGLGSIMSMMPALGAGMGKMKDLDEDQTAQAEKNMAR 381
Query: 174 MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MEAMI +MTPEER P+LL +P R+ R+A+ +G +V+++V Q
Sbjct: 382 MEAMIYSMTPEERRNPDLL--NPSRKHRIARGAGVDISEVNRMVKQF 426
>gi|254556541|ref|YP_003062958.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|380032469|ref|YP_004889460.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
gi|254045468|gb|ACT62261.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|342241712|emb|CCC78946.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
Length = 484
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 163/244 (66%), Gaps = 9/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K +++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELANIKDLVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMN 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI FDFNDF+ Q V +MG+M ++ MIPGM PA + K + + A++
Sbjct: 322 LKIQENTFDFNDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNINMDPKDIAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT E+ P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+
Sbjct: 381 YSMTNAEKADPDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGN 434
Query: 239 LPAL 242
+
Sbjct: 435 FAGM 438
>gi|450105269|ref|ZP_21859781.1| signal recognition particle protein [Streptococcus mutans SF14]
gi|449224870|gb|EMC24494.1| signal recognition particle protein [Streptococcus mutans SF14]
Length = 516
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ +FDFNDF++Q V MG M ++ MIPGM P A V+ E + A++
Sbjct: 322 EKMRKNSFDFNDFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 381 SSMTPAERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|402310924|ref|ZP_10829882.1| signal recognition particle protein [Eubacterium sp. AS15]
gi|400366612|gb|EJP19639.1| signal recognition particle protein [Eubacterium sp. AS15]
Length = 443
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 9/240 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K + P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAAL
Sbjct: 201 LMQELKNIKSTVRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++
Sbjct: 261 SIRAVTNKPIKFAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQSAVDEQSMKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
KI + +F+F DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+
Sbjct: 321 DKIRNRDFNFEDFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAI 376
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I++MT +ER +P ++ S R+ R+A+ SG QV++L+ Q + R MK + + G
Sbjct: 377 IQSMTKQERLEPSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMSG 434
>gi|386316967|ref|YP_006013131.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|410494699|ref|YP_006904545.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
gi|417927774|ref|ZP_12571162.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323127254|gb|ADX24551.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|340765648|gb|EGR88174.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|410439859|emb|CCI62487.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 520
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|227536075|ref|ZP_03966124.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227243972|gb|EEI93987.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 445
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+ VK P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 LMVEITAVKEATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGK-ALKDVEVDDNAFKPIEAIIDS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ERE P+ + + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 379 MTPFERENPDAIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|335030020|ref|ZP_08523519.1| signal recognition particle protein [Streptococcus infantis SK1076]
gi|334267482|gb|EGL85942.1| signal recognition particle protein [Streptococcus infantis SK1076]
Length = 521
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTSEERENPDLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|347534366|ref|YP_004841036.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504422|gb|AEN99104.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 479
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK++K V PT++LLVVDAMTGQ A + FN + ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELKEIKEVAKPTDILLVVDAMTGQNAVNMAEGFNEALDITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G+GE+M++L+ F+PDRMA RILGMGDVLS VEK ++ + ++ + E+
Sbjct: 262 SIKAVTGKPILFTGQGEKMDNLDVFHPDRMASRILGMGDVLSLVEKTKKNIDEKKSMELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ F+F+DFL Q + + MG + ++ MIPGM PA V K L ++A+I
Sbjct: 322 EKMKENTFNFDDFLDQLQQIQNMGPLKNLMAMIPGMAN-NPALQNVDMDPKDLDRIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EERE P++L +P RR+R+A+ S + Q V++L+ Q Q MK +M + G+
Sbjct: 381 YSMTNEERENPDVL--NPSRRRRIAKGSAQPIQSVNRLIKQFNQ----MKKMMNQISNGN 434
Query: 239 LPALSNL 245
+ + N+
Sbjct: 435 MSGMENM 441
>gi|228928893|ref|ZP_04091925.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830700|gb|EEM76305.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 449
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|323141933|ref|ZP_08076793.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413600|gb|EFY04459.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 448
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 167/241 (69%), Gaps = 6/241 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K ++P E+LLVVDAMTGQ+A + +F+ E+GI G I+TKLDGD+RGGA L
Sbjct: 201 LMEELRNIKGAVHPQEILLVVDAMTGQDAVTVAESFDKELGIDGLIVTKLDGDARGGAVL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKP+KL+G GE+++ LEPF+PDRMA RILGMGD+L+ VEK Q A EM+
Sbjct: 261 SVKAVTGKPVKLIGLGEKLDALEPFHPDRMASRILGMGDILTLVEKIQSTTDLAKALEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
KK+ F FL Q + V ++GS+ ++G+IPGMG I+ +++EA EK +EA+
Sbjct: 321 KKLRKDEFTLEQFLDQMQQVKKLGSLETILGLIPGMGGIS-QKLKEANVDEKEFDRIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
I +MT +ER+KPE++ S RRKR+A G Q V++L+ + + MK + G+ +
Sbjct: 380 IRSMTKKERQKPEIINGS--RRKRIAAGCGMRVQDVNKLLKNFEESKKMMKRMQGMAKFA 437
Query: 238 S 238
S
Sbjct: 438 S 438
>gi|358067367|ref|ZP_09153848.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
gi|356694539|gb|EHI56199.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
Length = 457
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 164/235 (69%), Gaps = 4/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL D+K+ +N + LLVVDAMTGQ+A + +FN +I + G I+TKLDGD+RGGAAL
Sbjct: 202 MMDELADIKKNINVNQTLLVVDAMTGQDAVNVAESFNDKIELDGIIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI VG GE++ DLE F+PDRMAGRILGMGD+LS +EKA+ M + +++
Sbjct: 262 SIKAVTGKPILYVGMGEKLSDLEVFHPDRMAGRILGMGDILSLIEKAEAEMDADKVKQIS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PA-QVREAEKSLKIMEAMI 178
+K+ A FDFNDFL+Q + + +MG + ++ M+PG+G + PA ++ EK +EA+I
Sbjct: 322 RKLQKAEFDFNDFLEQLQQIKKMGDLGGILNMLPGIGGMNLPAGGLQPDEKQFSRVEAII 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+M +ER P +L +P R+ R+A+ +G +V+++V Q QM+ MK G+
Sbjct: 382 LSMNVKERTDPAVL--NPSRKNRIAKGAGVNISEVNRIVKQFEQMKKMMKQFSGM 434
>gi|312862888|ref|ZP_07723128.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322516902|ref|ZP_08069799.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
gi|311101748|gb|EFQ59951.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322124525|gb|EFX96007.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
Length = 520
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELRDIKGFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|300767270|ref|ZP_07077182.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180484|ref|YP_003924612.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275233|ref|ZP_12890556.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821152|ref|YP_007414314.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
gi|300495089|gb|EFK30245.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045975|gb|ADN98518.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376008784|gb|EHS82113.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274649|gb|AGE39168.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
Length = 484
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 163/244 (66%), Gaps = 9/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K +++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELANIKDLVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMN 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI FDFNDF+ Q V +MG+M ++ MIPGM PA + K + + A++
Sbjct: 322 LKIQENTFDFNDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNINMDPKDIAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT E+ P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+
Sbjct: 381 YSMTNAEKADPDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGN 434
Query: 239 LPAL 242
+
Sbjct: 435 FAGM 438
>gi|408401624|ref|YP_006859587.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407967852|dbj|BAM61090.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 522
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|387784255|ref|YP_006070338.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
gi|338745137|emb|CCB95503.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
Length = 520
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELHDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|327313674|ref|YP_004329111.1| signal recognition particle protein [Prevotella denticola F0289]
gi|326946347|gb|AEA22232.1| signal recognition particle protein [Prevotella denticola F0289]
Length = 447
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|409122949|ref|ZP_11222344.1| signal recognition particle protein [Gillisia sp. CBA3202]
Length = 442
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEIANIHTAIKPEETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + +MGSM ++GMIPG GK+ + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQLHQIKKMGSMKDLLGMIPGAGKMLK-DIDIDDDAFKHVEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P ++ + VR+KR+A SG + QQV+QL+ Q
Sbjct: 379 MTPAERSTPTII--NAVRKKRIAGGSGTSVQQVNQLLKQF 416
>gi|228476757|ref|ZP_04061423.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|340398712|ref|YP_004727737.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|387761204|ref|YP_006068181.1| signal recognition particle protein [Streptococcus salivarius 57.I]
gi|228251628|gb|EEK10729.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|338742705|emb|CCB93210.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|339291971|gb|AEJ53318.1| signal recognition particle protein [Streptococcus salivarius 57.I]
Length = 520
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELHDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|306833449|ref|ZP_07466576.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|336064234|ref|YP_004559093.1| signal recognition particle subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
gi|304424219|gb|EFM27358.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|334282434|dbj|BAK30007.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
Length = 521
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++ KPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITSKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|251782371|ref|YP_002996673.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391000|dbj|BAH81459.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 522
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|315607956|ref|ZP_07882949.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
gi|315250425|gb|EFU30421.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
Length = 447
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISNLKQAVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++
Sbjct: 320 KKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 379 MTPKERSNPEILNSS--RRQRIAKGSGMNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|257867539|ref|ZP_05647192.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257873868|ref|ZP_05653521.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257877619|ref|ZP_05657272.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325571330|ref|ZP_08146830.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|420262069|ref|ZP_14764712.1| signal recognition particle protein [Enterococcus sp. C1]
gi|257801595|gb|EEV30525.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257808032|gb|EEV36854.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257811785|gb|EEV40605.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325155806|gb|EGC68002.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|394771091|gb|EJF50875.1| signal recognition particle protein [Enterococcus sp. C1]
Length = 472
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK +K + P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAAL
Sbjct: 202 LMEELKQIKDLAQPNEILLVVDAMTGQDAVNVAESFNQQLGITGVVITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+G PIK G GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRQVTGAPIKFTGTGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM ++ + V+ K + +AM+
Sbjct: 322 QKMKENSFDFNDFVEQIDQVMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVY 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|220905067|ref|YP_002480379.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869366|gb|ACL49701.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 512
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 157/228 (68%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K + P E+L V DAMTGQ+A + +FN +G+TG +LTK+DGD+RGGAAL
Sbjct: 200 LMQELEAIKAAVQPQEILFVADAMTGQDAVTVAESFNERLGVTGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G P+K VG GE++ ++E F+PDR+AGRILGMGDVL+ VEKAQ + E+AEE+
Sbjct: 260 SIRAVTGAPVKFVGMGEKLSEMEVFHPDRIAGRILGMGDVLTLVEKAQGAINAEEAEELA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ A+FD DF Q R + ++GS+ ++ MIPG+G K+ A EK + EA
Sbjct: 320 RKMKKASFDLEDFRTQMRRIKKLGSLESILKMIPGLGGLRDKLAEASGAMPEKEMARTEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I +MT ER P+LL S RR R+A+ +G T QV+QLV Q QMR
Sbjct: 380 IINSMTMAERRNPDLLNGS--RRARIAKGAGVTVAQVNQLVRQFEQMR 425
>gi|302038373|ref|YP_003798695.1| signal recognition particle protein [Candidatus Nitrospira
defluvii]
gi|300606437|emb|CBK42770.1| Signal recognition particle protein [Candidatus Nitrospira
defluvii]
Length = 449
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 163/239 (68%), Gaps = 7/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL VK+ +NP EVLLV DAMTGQ+A + F+ ++G+TG ILTK++GD+RGGA L
Sbjct: 204 LMAELVAVKQAVNPHEVLLVADAMTGQDAVNMAGQFDQQVGLTGVILTKVEGDARGGAVL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK +G GE+++ LEPF+PDRMA RILGMGDVLS +EKAQE +E+AE Q
Sbjct: 264 SIRAVTGKPIKFLGMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQETFSREEAEAAQ 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
KK+ S+ F DF Q + R+GS +++GM+PG K+ A EK +K + AMI+
Sbjct: 324 KKLTSSTFTLEDFRSQLGQMNRLGSFEQILGMLPGGQKLKDLANSGLPEKEMKRVAAMID 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT ER L+ S R+KR+A+ SG + Q+V++L+ Q Q R + VM GG+
Sbjct: 384 SMTTRERRDHTLINGS--RKKRIARGSGTSVQEVNRLIKQFLQAR----KIAKVMSGGA 436
>gi|228473709|ref|ZP_04058457.1| signal recognition particle protein [Capnocytophaga gingivalis ATCC
33624]
gi|228274856|gb|EEK13673.1| signal recognition particle protein [Capnocytophaga gingivalis ATCC
33624]
Length = 444
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ D+ + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+
Sbjct: 200 MMKEIADIHHAVTPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVVLTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK VG GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 SIKSVVNKPIKFVGTGEKMDAIDIFYPSRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG+GK + ++ + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLSQIQQIKKMGSMKDLLGMIPGVGKAVK-DLDISDDAFKYIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 379 MTPEERSNPAIINTS--RKNRIAKGSGRNISEVNQLLKQF 416
>gi|417753165|ref|ZP_12401305.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|333770647|gb|EGL47657.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
Length = 520
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVKVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|205373346|ref|ZP_03226150.1| signal recognition particle protein [Bacillus coahuilensis m4-4]
Length = 382
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +F+ +GITG +LTKLDGD+RGGAAL
Sbjct: 137 LMDELKQIKELSKPDEIFLVVDAMTGQDAVNVAKSFDDALGITGVVLTKLDGDTRGGAAL 196
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + +E A+E++
Sbjct: 197 SIRSVTEKPIKFVGLGEKMDALEPFHPERMAQRILGMGDVLSLIEKAQSNIDEEKAKELE 256
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
K+ +A+F F+DFL Q V +MG + +I M+PG K+ ++ +K L +EA+I+
Sbjct: 257 NKMRTASFTFDDFLDQLGQVKQMGPLDELIKMMPGANKMKGLDNLKIDDKQLAHVEAIIQ 316
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E+ +PE++ + R+KR+A SG+ Q+V++L+ Q M+ MK +
Sbjct: 317 SMTKAEKTQPEIINAN--RKKRIAAGSGRPVQEVNRLLKQFEDMKKMMKQM 365
>gi|401564280|ref|ZP_10805184.1| signal recognition particle protein [Selenomonas sp. FOBRC6]
gi|400188997|gb|EJO23122.1| signal recognition particle protein [Selenomonas sp. FOBRC6]
Length = 458
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 159/228 (69%), Gaps = 6/228 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + P E+LLVVDAMTGQEA + +F+ +G+ G I+TKLDGD+RGGAAL
Sbjct: 200 LMQELGDIKAAVKPHEILLVVDAMTGQEAVNVAQSFDESLGLDGVIMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G P+K VG GE++E LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGCPVKFVGMGEKLEPLEVFHPDRMASRILGMGDVLSLVEKAQENFDLENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
K+ +F +DFL Q + V ++GS++ ++GMIPGMG K+ + K ++ +EA
Sbjct: 320 AKLRRNDFTLDDFLDQLQQVKKLGSLNSILGMIPGMGGLKKKLGDQEFDLDGKEMRQLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q +MR
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQFGEMR 425
>gi|325860535|ref|ZP_08173639.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
gi|325481920|gb|EGC84949.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
Length = 456
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 158/232 (68%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K+ + P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIESLKKHVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF Q + + +MG++ + MIPG+GK V + + K +EA+I++
Sbjct: 320 KKIQKNQFDFNDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 379 MTPKERTNPEVLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|160892788|ref|ZP_02073578.1| hypothetical protein CLOL250_00319 [Clostridium sp. L2-50]
gi|156865829|gb|EDO59260.1| signal recognition particle protein [Clostridium sp. L2-50]
Length = 448
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K +N T +L VDAMTGQ+A + TTFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMDELAEIKENINVTYTVLTVDAMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G GE++ DLEPFYP RMA RILGMGDV S +EKAQ + E A+EM+
Sbjct: 262 SIKAVTGKPILYAGMGEKLTDLEPFYPSRMASRILGMGDVESLIEKAQNAIDDEKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K A+FDFNDF++Q + +MG + ++ M+PGM V+ E + K +A+I++
Sbjct: 322 QKFRKASFDFNDFMEQMDQLEKMGGIGDLLSMMPGMSS-QMKNVQIDEDAGKKPKAIIQS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
MTP ER + + SP R+KR+A +G +V++ + Q Q + MK + G+M G
Sbjct: 381 MTPNERCLKDPI--SPSRKKRIADGAGVQIAEVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|56807691|ref|ZP_00365570.1| COG0541: Signal recognition particle GTPase [Streptococcus pyogenes
M49 591]
Length = 386
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 68 LMEELRDVKALAQPNEILLVVDSMIGQEAANIAYEFNHQLSITGVVLTKIDGDTRGGAAL 127
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 128 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 187
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 188 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 247
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 248 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 299
>gi|227872399|ref|ZP_03990746.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
gi|227841759|gb|EEJ52042.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
Length = 459
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 170/245 (69%), Gaps = 5/245 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK +K + +L VDAMTGQEA + +F+ E+G+ G IL+K DGD+RGGAAL
Sbjct: 202 LMEELKRMKSAVPVDWTILTVDAMTGQEAVNVAESFSKEVGVNGVILSKCDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++G+PI +G GE++ DLEPFYPDRMAGRILGMGDVLS +EKAQ M +E A+E
Sbjct: 262 SIKAMTGQPILYLGMGEKLSDLEPFYPDRMAGRILGMGDVLSLIEKAQSEMDEEKAKESV 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIE 179
+K+ F+++DFL Q + ++G ++ ++ M+PGM K + + ++EK +K +++MI+
Sbjct: 322 RKLSKGQFNYDDFLDQMNQLQKLGGIAGILKMLPGMNKAMQGIDLEDSEKKMKQVKSMIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--G 237
+MT +ER P+L+ +P R+KR+AQ +G +V++LV Q +M+ MK G M+G G
Sbjct: 382 SMTFKERANPKLM--NPSRKKRIAQGAGVDIAEVNKLVKQFEEMQKMMKQFGGSMKGKHG 439
Query: 238 SLPAL 242
P +
Sbjct: 440 GFPGM 444
>gi|410944737|ref|ZP_11376478.1| signal recognition particle protein [Gluconobacter frateurii NBRC
101659]
Length = 463
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 163/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE++ ++ V NP E LLVVDAMTGQ+A +FN +GITG +++++DGD+RGGAAL
Sbjct: 199 LMDEVRQIRAVTNPAETLLVVDAMTGQDAVNTAKSFNEAVGITGVVMSRMDGDARGGAAL 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++G PIKL G GE++E LE F+P+R+AGRILG+GDV VE+A E + E+ E +
Sbjct: 259 SMKAITGAPIKLTGSGEKLEALEEFHPERVAGRILGLGDVAGLVERAAETLDHEEGERVA 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSL-KIMEAMI 178
KK+++ FD +D++ Q + RMGS+S ++GM+PGMGKI +E + S+ K +A+I
Sbjct: 319 KKMLAGKFDLDDYVSQINQINRMGSISGILGMLPGMGKIKDMLGDKEIDTSIFKRHKAII 378
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER+ P ++ S R+KR+A SG T Q+V++L+ Q M MK +
Sbjct: 379 SSMTKQERKMPGIIKAS--RKKRIASGSGTTVQEVNRLLKQFDDMSTMMKRI 428
>gi|294500961|ref|YP_003564661.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|295706307|ref|YP_003599382.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|384045187|ref|YP_005493204.1| signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
gi|294350898|gb|ADE71227.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|294803966|gb|ADF41032.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|345442878|gb|AEN87895.1| Signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
Length = 447
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K + NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMEELEQIKELSNPDEIFLVVDAMTGQDAVNVADSFNKQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK VG GE+M+ +E F+P+RMA RILGMGDVL+ +EKAQ + E A+E++
Sbjct: 262 SIRAVTDTPIKFVGLGEKMDAIEAFHPERMASRILGMGDVLTLIEKAQANVDAEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
K+ + +F F+DFL Q V +MG + +IGM+PG K+ + ++ EK + +EA+I
Sbjct: 322 AKLRTQSFTFDDFLDQLAQVRQMGPLDELIGMLPGANKVKGLKNLQVDEKQINHVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E+ PE++ S RRKR+A+ SG++ Q+V++L+ Q M+ MK +
Sbjct: 382 SMTKAEKTNPEIINAS--RRKRIAKGSGRSVQEVNRLLKQFEDMKKMMKQM 430
>gi|229019040|ref|ZP_04175881.1| Signal recognition particle protein [Bacillus cereus AH1273]
gi|228742280|gb|EEL92439.1| Signal recognition particle protein [Bacillus cereus AH1273]
Length = 316
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 168/236 (71%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 69 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 128
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 129 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 188
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 189 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 246
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK++ G+
Sbjct: 247 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKSMTGM 300
>gi|345303700|ref|YP_004825602.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345112933|gb|AEN73765.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 450
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 161/245 (65%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 204 MMQEVEQIKEAVRPHEILFVVDSMTGQDAVNTAKAFNERLDFDGVVLTKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK GE+++ L PFYPDRMA RILGMGDV+S VE+AQE AE+++
Sbjct: 264 SIRSVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVISLVERAQEQYDARQAEKLR 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ +A+FD DF +Q + + +MGS+ +IGMIPG+G+ + + + K +EAMI +
Sbjct: 324 RKLRTADFDLEDFYEQLQRIKKMGSLRELIGMIPGLGRYVK-DLDVDDDAFKHIEAMILS 382
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P+++ S RR+R+A+ SG V+QL+ Q +MR MK++ +M G
Sbjct: 383 MTPEERRNPDIIDAS--RRRRIARGSGMEVSDVNQLLRQFKEMRKMMKSMSKLMGKGRAV 440
Query: 241 ALSNL 245
L L
Sbjct: 441 DLRQL 445
>gi|218887972|ref|YP_002437293.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758926|gb|ACL09825.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 518
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 161/234 (68%), Gaps = 4/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K + P E+L V DAMTGQ+A + +FN + I+G +LTK+DGD+RGGAAL
Sbjct: 200 LMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNTALDISGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKP+K VG GE++ D+E F+PDR+AGRILGMGD+++ +EKAQ ++ E+AEE+
Sbjct: 260 SIRSVTGKPVKFVGMGEKLSDIEVFHPDRVAGRILGMGDMMTLIEKAQSTIKAEEAEELG 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K A FD DF Q R + ++GS+ ++ +IPGMG + ++ EK + +EA+I
Sbjct: 320 RKFQKAEFDLEDFRTQMRRLKKLGSLEGILKLIPGMGALREKLGEMNVPEKEMGRVEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT +ER P++L S RR+R+A SG T Q V+QL+ QMR MK +MG
Sbjct: 380 NSMTMQERRNPKVLNGS--RRQRIAMGSGTTVQDVNQLINNFEQMRGMMKKVMG 431
>gi|399926872|ref|ZP_10784230.1| signal recognition particle protein [Myroides injenensis M09-0166]
Length = 445
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEIANIHNAIKPHETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQ +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDIFYPERMADRILGMGDVISLVERAQAQYDEEEARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + V +MGSM ++GMIPG+GK V + + K +EA+I +
Sbjct: 320 KKIAKNEFGFDDFLSQIQQVKKMGSMKDLVGMIPGVGK-ALKDVEIEDDAFKHIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER KP LL R++R+A+ SG QQV+QL+ Q
Sbjct: 379 MTPAERSKPSLL--DAKRKQRIAKGSGTDIQQVNQLLKQF 416
>gi|334880634|emb|CCB81397.1| signal recognition particle protein Ffh [Lactobacillus pentosus
MP-10]
Length = 484
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 163/244 (66%), Gaps = 9/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K +++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELANIKDLVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMN 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI FDFNDF+ Q V +MG+M ++ MIPGM PA + K + + A++
Sbjct: 322 LKIQENTFDFNDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNLNMDPKDIAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT E+ P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+
Sbjct: 381 YSMTKAEKADPDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGN 434
Query: 239 LPAL 242
+
Sbjct: 435 FSGM 438
>gi|193216162|ref|YP_001997361.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
gi|193089639|gb|ACF14914.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
Length = 449
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 164/237 (69%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E + +KR L+P E+L VVD+M GQEA FN + G +LTK+DGD+RGGAAL
Sbjct: 200 MMAEAERLKRELSPEEILFVVDSMIGQEAVNTAKVFNDRLDFDGVVLTKMDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK + +GE+++DL+ FYP+RMA RILGMGD++SFVEKAQE + E +++Q
Sbjct: 260 SIKTVVDKPIKFLSQGEKVDDLDIFYPERMAQRILGMGDIVSFVEKAQETLDLEKTQKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+++ F+ DF +Q + + +MGS+ +I MIPG+ K+ P Q + E +LK++EA+I +
Sbjct: 320 KRLIENEFNLEDFYEQLQELKKMGSLQNLIDMIPGLSKVVPKQEID-ESNLKVIEAIINS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
MT +ER+KP ++ S RR R+A+ SG Q V+ L+ Q +M+ MK++ + + G
Sbjct: 379 MTKDERQKPGIINGS--RRSRIAKGSGTRVQDVNMLLKQFMEMKKMMKSVTKMAKSG 433
>gi|452995947|emb|CCQ92348.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 164/230 (71%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELK++K ++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMVELKEIKAQVHPQEILLVVDAMTGQDAVTVAESFHQQLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE++E LEPFYPDRMA RILGMGDVL+ +EKAQ + E A+E++
Sbjct: 262 SVKAVTGCPIKFAAMGEKLEALEPFYPDRMASRILGMGDVLTLIEKAQAEVDAEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ A F DFL+Q V ++G + ++ MIPGM ++ ++ EK + +EA+I++
Sbjct: 322 RKLRKAEFTLEDFLEQMEQVRKLGPLEDLLAMIPGMNRLKDLKID--EKQIAHVEAIIKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +E++ P+++ S RRKR+AQ SG + +V++L+ Q + + MK L
Sbjct: 380 MTRQEKQNPQIINYS--RRKRIAQGSGTSLTEVNRLLKQFEETKKMMKQL 427
>gi|332638237|ref|ZP_08417100.1| signal recognition particle protein [Weissella cibaria KACC 11862]
Length = 488
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 5/226 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E+LLVVDAMTGQ A FN + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADVKEIAQPDEILLVVDAMTGQNAVETAEGFNERLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDFDEKQAAETM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ S FDFNDF+ Q V MG + ++ MIPGM P A V+ K + ++A++
Sbjct: 322 EKMKSNTFDFNDFIDQMDQVQNMGPIEDLLKMIPGMAN-NPALANVKVDPKDMAHLKAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MTP ERE P+LL +P RR+R+A +G+ +V++++ Q +M+
Sbjct: 381 MSMTPAERENPDLL--NPSRRRRLAAGAGRPIVEVNRMIKQFNEMK 424
>gi|409196181|ref|ZP_11224844.1| signal recognition particle protein [Marinilabilia salmonicolor JCM
21150]
Length = 443
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+
Sbjct: 200 MMNEISAIKKAVNPHETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++Q
Sbjct: 260 SIRSVVDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDSEEAQKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F+F+DFL Q + + +MG++ + MIPGMGK+ V + + K +EA+I +
Sbjct: 320 KKIAKNQFNFDDFLSQIKQIKKMGNLKDLAAMIPGMGKMLK-NVDIDDDAFKGVEAIISS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER++P L+ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 379 MTPEERQQPTLINGS--RRKRIATGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|163814209|ref|ZP_02205601.1| hypothetical protein COPEUT_00363 [Coprococcus eutactus ATCC 27759]
gi|158450658|gb|EDP27653.1| signal recognition particle protein [Coprococcus eutactus ATCC
27759]
Length = 448
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDEL ++K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMDELAEIKANLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM+
Sbjct: 262 SIKAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K A+FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +
Sbjct: 322 QKFRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
MTP ER + + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 381 MTPRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|440780913|ref|ZP_20959384.1| signal recognition particle protein [Clostridium pasteurianum DSM
525]
gi|440221501|gb|ELP60706.1| signal recognition particle protein [Clostridium pasteurianum DSM
525]
Length = 450
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 168/233 (72%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K +NP+E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAAL
Sbjct: 201 LMDELKNIKSNINPSEILLVVDSMTGQDAVNVAESFNNTLDINGVILTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKPIK VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ + +++A+E+
Sbjct: 261 SIRSMTGKPIKYVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQSAIDEKEAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ---VREAEKSLKIMEAM 177
+K++S +F+F DFL + V ++G + +++ M+P Q + ++K LK +E++
Sbjct: 321 EKMLSQDFNFEDFLSMFKQVKKLGPIGKLLEMLPNNASTKMLQGVDLSNSDKELKKVESI 380
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT +ER+ P L++ S R+KR+A SG + Q++++L+ Q MR MK +
Sbjct: 381 IYSMTVKERKNPTLISSSSSRKKRIASGSGTSVQEINKLLKQFEMMRKSMKQM 433
>gi|333979545|ref|YP_004517490.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823026|gb|AEG15689.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 456
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 161/234 (68%), Gaps = 8/234 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL+ +K + P E+LLVVDAMTGQ A + TFN +G+ G +LTKLDGD+RGGAAL
Sbjct: 201 MMAELETLKAAVRPHEILLVVDAMTGQVAVNIAETFNKRLGLDGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G PIK VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E +
Sbjct: 261 SIKAVTGCPIKFVGVGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQVARLN 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEA 176
KKI SA+F +DFL+Q + V ++G + ++I MIPG+G + +++E ++ L +EA
Sbjct: 321 KKIRSADFTLDDFLEQLQEVKKLGPIQQIISMIPGLGNMK--KLKELGDIDDRELVYVEA 378
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+I++MTP ER P + S RR+R+A+ SG T Q+V+ ++ Q Q R M+ L
Sbjct: 379 IIKSMTPWERAHPHEINGS--RRRRIARGSGTTVQKVNSVLKQFEQTRKMMRQL 430
>gi|392948726|ref|ZP_10314329.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
gi|392436003|gb|EIW13924.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
Length = 484
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 163/244 (66%), Gaps = 9/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL ++K +++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMNELANIKDLVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM
Sbjct: 262 SIRAVTGKPIKFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMN 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
KI FDFNDF+ Q V +MG+M ++ MIPGM PA + K + + A++
Sbjct: 322 LKIQENTFDFNDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNLNMDPKDIAHIRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT E+ P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+
Sbjct: 381 YSMTKAEKADPDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGN 434
Query: 239 LPAL 242
+
Sbjct: 435 FSGM 438
>gi|160901803|ref|YP_001567384.1| signal recognition particle protein [Petrotoga mobilis SJ95]
gi|160359447|gb|ABX31061.1| signal recognition particle protein [Petrotoga mobilis SJ95]
Length = 439
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+++K+++NP E+L+VVD+M GQ+A FN ++ ++G +++KLDGDSRGG +
Sbjct: 199 MMEELENIKKLINPDEILMVVDSMVGQDAVNSAKEFNDKLDLSGFVVSKLDGDSRGGVII 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKP+KLVG GE+++DLE FYPDR GRILGMGDVLSF+EK ++ + ++ AEE
Sbjct: 259 SIRYITGKPVKLVGVGEKIDDLEEFYPDRYVGRILGMGDVLSFIEKVEQDIDKKKAEEDA 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
++ M FD DFL+Q R + ++G +S ++ M+PG+ K V + E+ LK EA+I +
Sbjct: 319 ERFMDGKFDLKDFLEQIRQIRKLGPLSSLLEMVPGVPK-EQVDVTKGEQELKKFEAIINS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP+ER+ P +L S R++R+A+ SG T Q +++L+ Q++ MK +
Sbjct: 378 MTPKERKNPGILTYS--RKQRIAKGSGTTLQDINRLLKSYDQLKKTMKQM 425
>gi|327399601|ref|YP_004340470.1| signal recognition particle protein [Hippea maritima DSM 10411]
gi|327182230|gb|AEA34411.1| signal recognition particle protein [Hippea maritima DSM 10411]
Length = 441
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 157/230 (68%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +K+ + P E+L V DAM GQEA + F+ +GITGAI TKLDGD+RGGAAL
Sbjct: 198 LMEELERIKQKIEPDEILFVADAMIGQEAVNVAKVFDERVGITGAIFTKLDGDARGGAAL 257
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+ +V GKPIK G GE++ D EPFYPDR+A RILGMGDVL+ +EK +E +++A+E+
Sbjct: 258 SIMKVVGKPIKFAGVGEKISDFEPFYPDRVASRILGMGDVLTLIEKVRETENEKEAKELA 317
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ F +DFL Q + + +MGS++++I MIPGM K+ K +K +EA+I +
Sbjct: 318 RKLKKQQFSLDDFLNQLKKIQKMGSIAKIIQMIPGMNKVKIDDEESFNKEIKHIEAIILS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EER+ ++L S R++R+A+ SG V++L+ Q +M MK +
Sbjct: 378 MTKEERQNYKILNAS--RKRRIAKGSGTRVSDVNRLIKQFIEMNKMMKGM 425
>gi|209559470|ref|YP_002285942.1| signal recognition particle subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
gi|209540671|gb|ACI61247.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
Length = 520
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANIAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|94994460|ref|YP_602558.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
gi|94547968|gb|ABF38014.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
Length = 522
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKFDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|261367302|ref|ZP_05980185.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
gi|282570905|gb|EFB76440.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
Length = 451
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +K + E LLVVDAM GQEA + TFN +IGITG +LTK DGD+RGGAAL
Sbjct: 201 LMDELVRIKEAVEVDETLLVVDAMAGQEAVNVAKTFNEKIGITGVVLTKTDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPI G GE++EDLEPFYP RMA RILGMGDVLS +EKAQ V ++AE
Sbjct: 261 SVLAVTGKPIYFQGTGEKLEDLEPFYPSRMASRILGMGDVLSLIEKAQSVQNDKEAEAAA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++M FD ND L Q + V +MG S ++ M+PG +I + +K L +EA+I +
Sbjct: 321 RRMMENKFDMNDLLAQFQQVKKMGGASALLAMMPGGNQIDADALD--DKMLPRIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ER KPE++ +P R++R+A SG+T + V++L+ Q M+ MK +
Sbjct: 379 MTPAERAKPEII--NPKRKRRIAAGSGQTVEAVNKLLRQYEMMQKMMKKV 426
>gi|225868530|ref|YP_002744478.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
gi|225701806|emb|CAW99232.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
Length = 523
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 163/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL++VK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMSELREVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF++Q V MG M ++ MIPGM P A ++ +K + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAT-NPALANIKVDDKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE+PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERERPELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|379705243|ref|YP_005203702.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374681942|gb|AEZ62231.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 519
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF++Q V MG M +I MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|422419418|ref|ZP_16496373.1| signal recognition particle protein, partial [Listeria seeligeri
FSL N1-067]
gi|313632786|gb|EFR99746.1| signal recognition particle protein [Listeria seeligeri FSL N1-067]
Length = 427
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 179 LMDELKQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAAL 238
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M+
Sbjct: 239 SIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAME 298
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 299 QKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIK 358
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 359 SMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 407
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 210 LMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAM 269
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A +
Sbjct: 270 SIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAM 329
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ +FDFNDFL Q + +MG + ++ M+PGM PA + K ++A+I
Sbjct: 330 AKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAII 388
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+
Sbjct: 389 YSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGN 442
Query: 239 LPALSNL 245
L + NL
Sbjct: 443 LSGMENL 449
>gi|29376252|ref|NP_815406.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227518889|ref|ZP_03948938.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256762629|ref|ZP_05503209.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256961798|ref|ZP_05565969.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256964995|ref|ZP_05569166.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257419425|ref|ZP_05596419.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|293382861|ref|ZP_06628779.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|293389652|ref|ZP_06634107.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|307273091|ref|ZP_07554337.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|312907668|ref|ZP_07766659.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|312910285|ref|ZP_07769132.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|384513375|ref|YP_005708468.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|422714488|ref|ZP_16771214.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|422715746|ref|ZP_16772462.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|424676631|ref|ZP_18113502.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|424681553|ref|ZP_18118340.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|424683743|ref|ZP_18120493.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|424686353|ref|ZP_18123021.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|424690375|ref|ZP_18126910.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|424695468|ref|ZP_18131851.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|424696793|ref|ZP_18133134.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|424699821|ref|ZP_18136032.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|424703166|ref|ZP_18139300.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|424707337|ref|ZP_18143321.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|424717003|ref|ZP_18146301.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|424720581|ref|ZP_18149682.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|424724129|ref|ZP_18153078.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|424733720|ref|ZP_18162275.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|424743981|ref|ZP_18172286.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|424750511|ref|ZP_18178575.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|430360637|ref|ZP_19426358.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|430370543|ref|ZP_19429068.1| signal recognition particle protein [Enterococcus faecalis M7]
gi|29343715|gb|AAO81476.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227073680|gb|EEI11643.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256683880|gb|EEU23575.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256952294|gb|EEU68926.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256955491|gb|EEU72123.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257161253|gb|EEU91213.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|291079526|gb|EFE16890.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|291081045|gb|EFE18008.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|306510076|gb|EFM79100.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|310626696|gb|EFQ09979.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|311289558|gb|EFQ68114.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|315576091|gb|EFU88282.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|315580665|gb|EFU92856.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|327535264|gb|AEA94098.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|402351260|gb|EJU86152.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|402356251|gb|EJU90985.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|402364502|gb|EJU98938.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|402364741|gb|EJU99176.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|402367207|gb|EJV01548.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|402368406|gb|EJV02722.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|402375750|gb|EJV09730.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|402377122|gb|EJV11033.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|402384935|gb|EJV18476.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|402385171|gb|EJV18711.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|402386351|gb|EJV19857.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|402391050|gb|EJV24366.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|402393052|gb|EJV26282.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|402395863|gb|EJV28944.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|402399657|gb|EJV32523.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|402406489|gb|EJV39039.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|429512752|gb|ELA02349.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|429515307|gb|ELA04823.1| signal recognition particle protein [Enterococcus faecalis M7]
Length = 472
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|423452854|ref|ZP_17429707.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|423470059|ref|ZP_17446803.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
gi|423483435|ref|ZP_17460125.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|423522325|ref|ZP_17498798.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|423558592|ref|ZP_17534894.1| signal recognition particle protein [Bacillus cereus MC67]
gi|401139413|gb|EJQ46975.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|401140986|gb|EJQ48541.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|401175019|gb|EJQ82222.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|401191860|gb|EJQ98882.1| signal recognition particle protein [Bacillus cereus MC67]
gi|402437311|gb|EJV69335.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
Length = 449
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKVEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|71903552|ref|YP_280355.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
gi|71802647|gb|AAX72000.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
Length = 522
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|163847609|ref|YP_001635653.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525465|ref|YP_002569936.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
gi|163668898|gb|ABY35264.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222449344|gb|ACM53610.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
Length = 450
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 164/232 (70%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ ++ ++P E LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAAL
Sbjct: 200 LMQELEQIENRVHPIERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 118
SV+ V+G PIK + GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++
Sbjct: 260 SVRAVTGVPIKFLSTGEKVDGNTLEVFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKK 319
Query: 119 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMI 178
MQK++ FDF DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I
Sbjct: 320 MQKRLSKGEFDFEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTPEER +PE++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 380 YSMTPEERRRPEIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|407773728|ref|ZP_11121028.1| Signal recognition particle subunit FFH/SRP54 (Srp54)
[Thalassospira profundimaris WP0211]
gi|407283174|gb|EKF08715.1| Signal recognition particle subunit FFH/SRP54 (Srp54)
[Thalassospira profundimaris WP0211]
Length = 495
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 172/263 (65%), Gaps = 20/263 (7%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M E+ ++ +NP E LLV DAMTGQ++ + F ++GITG +LT++DGD+RGGAAL
Sbjct: 200 LMSEVAQIRDAVNPVETLLVTDAMTGQDSVNVAKEFADKVGITGIVLTRVDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++G PIK++G GE+++++E F+PDR+A RILGMGDV+S VEKA E ++ EDAE+M
Sbjct: 260 SMRQITGCPIKMIGIGEKIDEMEAFHPDRIANRILGMGDVVSLVEKAAENIKAEDAEKMA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK+ FD ND L Q + + +MG +S ++GM+PGMG + +Q + K L EA+I
Sbjct: 320 KKLRKGQFDLNDLLAQLKQLQKMGDLSGIMGMLPGMGALKKQMSQTKLDPKLLTHQEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV--------RMKNL 230
+MTP+ERE P L+ S R+KR+A G T Q V++L+ Q M K L
Sbjct: 380 LSMTPKERENPALIKAS--RKKRIAAGCGLTVQDVNKLLKQYQTMSTMIKKMGKMGKKGL 437
Query: 231 MG--------VMEGGSLPALSNL 245
G ++EGG +P L+NL
Sbjct: 438 FGGMPKMDPAMLEGGDMPDLNNL 460
>gi|229031475|ref|ZP_04187475.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|229174511|ref|ZP_04302043.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|423401313|ref|ZP_17378486.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|423457972|ref|ZP_17434769.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|423477983|ref|ZP_17454698.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
gi|228609071|gb|EEK66361.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|228729764|gb|EEL80744.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|401148356|gb|EJQ55849.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|401654303|gb|EJS71846.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|402428145|gb|EJV60242.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
Length = 449
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|225028000|ref|ZP_03717192.1| hypothetical protein EUBHAL_02269 [Eubacterium hallii DSM 3353]
gi|224954714|gb|EEG35923.1| signal recognition particle protein [Eubacterium hallii DSM 3353]
Length = 451
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 164/233 (70%), Gaps = 9/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+++K ++ T+ +LVVDAMTGQ+A + TF ++GI G ILTKLDGD+RGGAAL
Sbjct: 202 MMEELQNIKANVDVTQTVLVVDAMTGQDAVNVAKTFEEKVGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++EDL+ FYPDRM RILGMGDV + +EKA+ + +E+A +++
Sbjct: 262 SIRAVTGKPILYVGMGEKLEDLQQFYPDRMTSRILGMGDVFTLIEKAENAVDEEEARKLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAM 177
+K+ A F F+DFL Q + + +MG ++ ++ MIPG+G +Q++ + ++ +EA+
Sbjct: 322 QKLRKAEFGFDDFLSQMQQIKKMGGLTDLLSMIPGVG----SQLKNVDIDDSAMDSIEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MTPEER P +L +P R+KR+A +G Q V++L Q Q R MK +
Sbjct: 378 IYSMTPEERANPNIL--NPSRKKRIANGAGVKLQDVNKLCKQFEQSRKMMKQM 428
>gi|229025286|ref|ZP_04181706.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|423389848|ref|ZP_17367074.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
gi|423418248|ref|ZP_17395337.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|228736039|gb|EEL86614.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|401106521|gb|EJQ14482.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|401641939|gb|EJS59656.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 168/236 (71%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK++ G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKSMTGM 433
>gi|423612062|ref|ZP_17587923.1| signal recognition particle protein [Bacillus cereus VD107]
gi|401247069|gb|EJR53413.1| signal recognition particle protein [Bacillus cereus VD107]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|326335869|ref|ZP_08202048.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692013|gb|EGD33973.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 448
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 150/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + +NP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMKEIAEIHKAVNPQETLFVVDAMTGQDAVNTAKAFNDVLDFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++Q
Sbjct: 260 SIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKYIEAIIFS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P ++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 379 MTPAERSNPSIINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|404418469|ref|ZP_11000236.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
gi|403489062|gb|EJY94640.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
Length = 454
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 167/231 (72%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+DVK + P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAAL
Sbjct: 202 LMDELQDVKTIAKPNEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + Q+ A++++
Sbjct: 262 SIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDQDKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ S++F +DFL+Q V +G + ++ MIPGM K+ + +EK + ++A+I+
Sbjct: 322 QKMRSSSFTLDDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGLDNLNMSEKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER P L S R+KR+A+ SG++ Q+V++L+ Q +M+ MK
Sbjct: 382 SMTPNERNDPNTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNEMKKMMKQF 430
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 210 LMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAM 269
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A +
Sbjct: 270 SIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAM 329
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ +FDFNDFL Q + +MG + ++ M+PGM PA + K ++A+I
Sbjct: 330 AKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAII 388
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+
Sbjct: 389 YSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGN 442
Query: 239 LPALSNL 245
L + NL
Sbjct: 443 LSGMENL 449
>gi|374323436|ref|YP_005076565.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
gi|357202445|gb|AET60342.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
Length = 458
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 172/249 (69%), Gaps = 5/249 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ + +NP EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMEELRQIHANVNPDEVLLVVDSMTGQDAVNVAEHFNTSLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+
Sbjct: 261 SVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F DFL+Q V ++G + +++ MIPGMG + + V+ +K + +EA++
Sbjct: 321 RKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDVKVDDKQMGRIEAIVH 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGG 237
+MT +E++ P+++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG
Sbjct: 381 SMTTQEKQNPDMINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGG 438
Query: 238 SLPALSNLE 246
AL L+
Sbjct: 439 KNKALKQLK 447
>gi|163752849|ref|ZP_02159973.1| signal recognition particle protein [Kordia algicida OT-1]
gi|161326581|gb|EDP97906.1| signal recognition particle protein [Kordia algicida OT-1]
Length = 443
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEIANIHKAIEPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + V +MG+M ++GMIPG K E + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQIQQVKKMGNMKDLVGMIPGASKAMKGMEIE-DDAFKHIEALIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER KP ++ S R+KR+A+ +G++ Q+++QL+ Q
Sbjct: 379 MTPAERSKPSMINAS--RKKRIAKGAGRSVQEMNQLLKQF 416
>gi|30021933|ref|NP_833564.1| signal recognition particle protein [Bacillus cereus ATCC 14579]
gi|218235010|ref|YP_002368646.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218898998|ref|YP_002447409.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228902348|ref|ZP_04066505.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|228909670|ref|ZP_04073493.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228922599|ref|ZP_04085899.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228940933|ref|ZP_04103492.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228954121|ref|ZP_04116150.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960061|ref|ZP_04121725.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228973862|ref|ZP_04134438.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980452|ref|ZP_04140762.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|229071343|ref|ZP_04204566.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|229111316|ref|ZP_04240869.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|229129121|ref|ZP_04258094.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|229152044|ref|ZP_04280239.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|229162781|ref|ZP_04290738.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|229180121|ref|ZP_04307465.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|365159378|ref|ZP_09355559.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|384187905|ref|YP_005573801.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402558829|ref|YP_006601553.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|410676219|ref|YP_006928590.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|423359119|ref|ZP_17336622.1| signal recognition particle protein [Bacillus cereus VD022]
gi|423385348|ref|ZP_17362604.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|423412350|ref|ZP_17389470.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|423425981|ref|ZP_17403012.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|423431865|ref|ZP_17408869.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|423437300|ref|ZP_17414281.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|423503478|ref|ZP_17480070.1| signal recognition particle protein [Bacillus cereus HD73]
gi|423528294|ref|ZP_17504739.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|423561749|ref|ZP_17538025.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|423582055|ref|ZP_17558166.1| signal recognition particle protein [Bacillus cereus VD014]
gi|423585746|ref|ZP_17561833.1| signal recognition particle protein [Bacillus cereus VD045]
gi|423628938|ref|ZP_17604687.1| signal recognition particle protein [Bacillus cereus VD154]
gi|423635384|ref|ZP_17611037.1| signal recognition particle protein [Bacillus cereus VD156]
gi|423641074|ref|ZP_17616692.1| signal recognition particle protein [Bacillus cereus VD166]
gi|423649708|ref|ZP_17625278.1| signal recognition particle protein [Bacillus cereus VD169]
gi|423656704|ref|ZP_17632003.1| signal recognition particle protein [Bacillus cereus VD200]
gi|434376948|ref|YP_006611592.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|449090786|ref|YP_007423227.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200284|ref|YP_007480365.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29897489|gb|AAP10765.1| Signal recognition particle, subunit Ffh/SRP54 [Bacillus cereus
ATCC 14579]
gi|218162967|gb|ACK62959.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218540894|gb|ACK93288.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228603330|gb|EEK60807.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|228620663|gb|EEK77532.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|228631393|gb|EEK88027.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|228654358|gb|EEL10223.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|228672092|gb|EEL27383.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|228711797|gb|EEL63749.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|228779272|gb|EEM27529.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|228785887|gb|EEM33890.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228799577|gb|EEM46530.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805687|gb|EEM52277.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228818769|gb|EEM64835.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228837028|gb|EEM82369.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849959|gb|EEM94790.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228857317|gb|EEN01820.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|326941614|gb|AEA17510.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363625376|gb|EHL76417.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084991|gb|EJP93237.1| signal recognition particle protein [Bacillus cereus VD022]
gi|401104418|gb|EJQ12395.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|401110728|gb|EJQ18627.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|401116621|gb|EJQ24459.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|401120455|gb|EJQ28251.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|401202006|gb|EJR08871.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|401212934|gb|EJR19675.1| signal recognition particle protein [Bacillus cereus VD014]
gi|401233092|gb|EJR39588.1| signal recognition particle protein [Bacillus cereus VD045]
gi|401268483|gb|EJR74531.1| signal recognition particle protein [Bacillus cereus VD154]
gi|401278135|gb|EJR84071.1| signal recognition particle protein [Bacillus cereus VD156]
gi|401280135|gb|EJR86057.1| signal recognition particle protein [Bacillus cereus VD166]
gi|401282988|gb|EJR88885.1| signal recognition particle protein [Bacillus cereus VD169]
gi|401290445|gb|EJR96139.1| signal recognition particle protein [Bacillus cereus VD200]
gi|401635404|gb|EJS53159.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|401787481|gb|AFQ13520.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|401875505|gb|AFQ27672.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|402451957|gb|EJV83776.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|402458832|gb|EJV90572.1| signal recognition particle protein [Bacillus cereus HD73]
gi|409175348|gb|AFV19653.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|449024543|gb|AGE79706.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452105677|gb|AGG02617.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|256831064|ref|YP_003159792.1| signal recognition particle protein [Desulfomicrobium baculatum DSM
4028]
gi|256580240|gb|ACU91376.1| signal recognition particle protein [Desulfomicrobium baculatum DSM
4028]
Length = 492
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 164/244 (67%), Gaps = 8/244 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K P E+L V DAMTGQ+A + FN + ITG +LTK+DGD+RGGAAL
Sbjct: 200 LMQELVGIKEKCRPQEILFVADAMTGQDAVTVAEKFNEVLDITGVVLTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKP+K VG GER+ +LE F+PDR+A RILGMGDVL+ +EKAQ + ++AE ++
Sbjct: 260 SIKSITGKPLKFVGMGERLSELEVFHPDRIASRILGMGDVLTLIEKAQSTIDSKEAEALE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
KK A FD DF Q R + ++GS+ ++ +IPGMG+I V+ EK L +EAMI
Sbjct: 320 KKFRKAEFDLEDFRTQMRRIKKLGSLEGIMKLIPGMGQIRKQLQDVQMPEKELGKVEAMI 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT ER +P+++ +P R++R+A+ SG T +V+QL+ QM+ MK M GG
Sbjct: 380 SSMTMAERHEPKII--NPSRKQRIAKGSGVTVTEVNQLLKNFEQMQKMMKK----MAGGK 433
Query: 239 LPAL 242
+P++
Sbjct: 434 MPSM 437
>gi|28895953|ref|NP_802303.1| signal recognition particle [Streptococcus pyogenes SSI-1]
gi|28811203|dbj|BAC64136.1| putative signal recognition particle [Streptococcus pyogenes SSI-1]
Length = 522
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|15895031|ref|NP_348380.1| Signal recognition particle GTPase Ffh [Clostridium acetobutylicum
ATCC 824]
gi|337736972|ref|YP_004636419.1| signal recognition particle GTPase Ffh [Clostridium acetobutylicum
DSM 1731]
gi|384458479|ref|YP_005670899.1| Signal recognition particle GTPase Ffh [Clostridium acetobutylicum
EA 2018]
gi|15024723|gb|AAK79720.1|AE007684_8 Signal recognition particle GTPase Ffh [Clostridium acetobutylicum
ATCC 824]
gi|325509168|gb|ADZ20804.1| Signal recognition particle GTPase Ffh [Clostridium acetobutylicum
EA 2018]
gi|336293132|gb|AEI34266.1| Signal recognition particle GTPase Ffh [Clostridium acetobutylicum
DSM 1731]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 167/234 (71%), Gaps = 2/234 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+++K +NP E+LLVVD+MTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMNELENIKSEVNPKEILLVVDSMTGQDAVNVAESFDNKLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK VG GE+M D+E F+PDRMA RILGMGDVL+ +EKAQ + ++ A+E+
Sbjct: 261 SIREMTGKPIKYVGLGEKMNDIEIFHPDRMASRILGMGDVLTLIEKAQSAIDEKQAKELG 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMI 178
+++S F+F+DFL+ + ++G + +++ M+PG + + + E +K EA+I
Sbjct: 321 DRMLSQEFNFDDFLQAFEQMKKLGPIGKLLEMVPGFNSSMLKGVDLSKNEGEMKKYEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
++MT +ER+ P L+ + R++R+A SG T Q+V++++ QM+ MK G
Sbjct: 381 KSMTAKERKNPSLITSTASRKRRIALGSGTTVQEVNKILKNFEQMKKMMKQFKG 434
>gi|347532240|ref|YP_004839003.1| signal recognition particle protein [Roseburia hominis A2-183]
gi|345502388|gb|AEN97071.1| signal recognition particle protein [Roseburia hominis A2-183]
Length = 452
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 6/241 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL +K + + +LVVDAMTGQ+A + TF+ IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMAELIQIKENVTVHQTVLVVDAMTGQDAVNVAKTFDERIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G GE++ DLE FYPDRMA RILGMGDVL+ +EKAQE +E A++++
Sbjct: 262 SIRAVTGKPIFYAGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAQEDFDEERAKKIE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM----GKITPAQVREAEKSLKIMEA 176
+K+ FDF +L+ + +MG +S ++GM+PG+ GK+ AEKSL EA
Sbjct: 322 QKMRKNEFDFEMYLESMSQMKKMGGLSSILGMMPGLGMGAGKMPDIDEAAAEKSLSRTEA 381
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+I +MTPEER+ P LL +P R++R+A +G +V++LV Q QM+ MK + G+M+
Sbjct: 382 IIYSMTPEERQNPSLL--NPSRKRRIAVGAGVDIAEVNRLVKQFEQMKKMMKQMPGMMKK 439
Query: 237 G 237
G
Sbjct: 440 G 440
>gi|296504340|ref|YP_003666040.1| signal recognition particle protein, partial [Bacillus
thuringiensis BMB171]
gi|296325392|gb|ADH08320.1| signal recognition particle protein [Bacillus thuringiensis BMB171]
Length = 316
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 69 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 128
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 129 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 188
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 189 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 246
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 247 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 300
>gi|386086552|ref|YP_006002426.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387909791|ref|YP_006340097.1| SRP54, signal recognition particle GTPase protein [Streptococcus
thermophilus MN-ZLW-002]
gi|312278265|gb|ADQ62922.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387574726|gb|AFJ83432.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus MN-ZLW-002]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 6/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 235
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 381 LSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|94544046|gb|ABF34094.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10270]
Length = 522
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|330717910|ref|ZP_08312510.1| signal recognition particle protein [Leuconostoc fallax KCTC 3537]
Length = 492
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 157/229 (68%), Gaps = 5/229 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + +P E+LL VDAMTGQ A F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIAEIAHPDEILLTVDAMTGQNATETAKGFSESLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGD+L+ +EKAQ+ + AE+
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDMLTLIEKAQKDFDEAAAEKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A + EK +EA++
Sbjct: 322 EKLRENTFDFNDFVAQLKQVQNMGPMEDILKMIPGMAN-NPALANLNVDEKQFIHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRM 227
++MTP ERE P+L+ +P RR+R+A SG+ +V++++ Q QMR M
Sbjct: 381 QSMTPAEREDPDLI--NPSRRRRLAAGSGRPIVEVNRMIKQFDQMRKMM 427
>gi|339499127|ref|YP_004697162.1| signal recognition particle protein [Spirochaeta caldaria DSM 7334]
gi|338833476|gb|AEJ18654.1| signal recognition particle protein [Spirochaeta caldaria DSM 7334]
Length = 453
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM EL ++ P E+LLV DAMTGQ A + F+ +IG+TG ILTK D D+RGGAAL
Sbjct: 201 MMTELVRLRDAAKPDELLLVADAMTGQSAVDIAKAFDEQIGLTGVILTKFDSDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKP+K VG GE+ ED EPFYPDR+A RILGMGD++S VEKAQ+V+ QE+A +Q
Sbjct: 261 SLKTITGKPLKFVGVGEKPEDFEPFYPDRVASRILGMGDIVSLVEKAQQVVNQEEAAALQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
KK++S +F D+L Q R V +MGS+ ++ M+PGM G+I+ + +A+ +K EA+I
Sbjct: 321 KKMLSEDFTLQDWLDQLRAVKKMGSLQSMLEMLPGMAGQISEEDLNKAD--MKTQEAIIC 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ERE L P RR R+A+ SG + +V++L+ + +MR MK +
Sbjct: 379 SMTKKERE--NYLIIGPSRRARIARGSGTSVAEVARLLKKFEKMRTMMKKM 427
>gi|119357327|ref|YP_911971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
gi|119354676|gb|ABL65547.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 160/245 (65%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E + +K L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMAEAEALKHALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V KPIK + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E EMQ
Sbjct: 260 SIRQVVEKPIKFISVGEKVDDLDLFYPDRMAQRILGMGDIVSFVEKAQETLDLEKTLEMQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+M FD NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +
Sbjct: 320 KKLMKNEFDLNDFFDQLQQLKKMGSIQGLISMVPGLNKMVPKQEIE-NLDFKPIEAMINS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MT +E+ PE++ S RR+R+A+ SG Q+V+ L+ Q +M+ M+++ + + G
Sbjct: 379 MTKQEKTNPEIINGS--RRQRIAKGSGTRVQEVNMLLKQFGEMKKMMRSVTKLSQSGRKI 436
Query: 241 ALSNL 245
NL
Sbjct: 437 TSQNL 441
>gi|229047532|ref|ZP_04193122.1| Signal recognition particle protein [Bacillus cereus AH676]
gi|229081100|ref|ZP_04213610.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|229146416|ref|ZP_04274787.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|229192014|ref|ZP_04318984.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228591565|gb|EEK49414.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228637049|gb|EEK93508.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|228702144|gb|EEL54620.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|228723779|gb|EEL75134.1| Signal recognition particle protein [Bacillus cereus AH676]
Length = 436
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 189 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 248
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 249 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 308
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 309 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 366
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 367 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 420
>gi|257124951|ref|YP_003163065.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
gi|257048890|gb|ACV38074.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
Length = 446
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 164/228 (71%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K NP E+LLVVD MTGQ+A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 200 LMHELQDIKDCFNPNEILLVVDGMTGQDAVNVAKEFNEQLDITGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + +++A++M+
Sbjct: 260 SVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDEKEAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K FDF DFLKQ + + +MGS++ ++ MIPG+ + + AEK +K +EA+I +
Sbjct: 320 EKFRKNQFDFEDFLKQFKMIRKMGSIAGIMKMIPGV-DTSMIDMGMAEKEMKKVEAIIFS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ER P+LL R+ R+A+ SG V++L+ Q QM+ MK
Sbjct: 379 MTVQERRDPKLLKNGS-RKMRIAKGSGVQVNDVNKLIKQFEQMKQMMK 425
>gi|139473726|ref|YP_001128442.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
gi|134271973|emb|CAM30211.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|55820929|ref|YP_139371.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55822851|ref|YP_141292.1| signal recognition particle protein [Streptococcus thermophilus
CNRZ1066]
gi|116627717|ref|YP_820336.1| signal recognition particle [Streptococcus thermophilus LMD-9]
gi|55736914|gb|AAV60556.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55738836|gb|AAV62477.1| signal recognition particle [Streptococcus thermophilus CNRZ1066]
gi|116100994|gb|ABJ66140.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Streptococcus thermophilus LMD-9]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 6/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 235
+MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 381 LSMTPEERENPDLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 160/233 (68%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK ++ V P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M+
Sbjct: 261 SVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++ F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++
Sbjct: 321 RQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT ER P+LL S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 380 MTKAERANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFTGV 430
>gi|171779410|ref|ZP_02920374.1| hypothetical protein STRINF_01255 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282027|gb|EDT47458.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 519
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF++Q V MG M +I MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+
Sbjct: 202 LMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAM 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A +
Sbjct: 262 SIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAM 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
K+ +FDFNDFL Q + +MG + ++ M+PGM PA + K ++A+I
Sbjct: 322 AKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEERE P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+
Sbjct: 381 YSMTPEERENPDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGN 434
Query: 239 LPALSNL 245
L + NL
Sbjct: 435 LSGMENL 441
>gi|257086986|ref|ZP_05581347.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|422721959|ref|ZP_16778536.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|424673086|ref|ZP_18110029.1| signal recognition particle protein [Enterococcus faecalis 599]
gi|256995016|gb|EEU82318.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|315027856|gb|EFT39788.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|402352896|gb|EJU87732.1| signal recognition particle protein [Enterococcus faecalis 599]
Length = 472
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 158/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 202 LMDELKQIKELANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 262 SIRAVTSAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 322 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQF 420
>gi|306827321|ref|ZP_07460608.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
gi|304430468|gb|EFM33490.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|443242221|ref|YP_007375446.1| signal recognition protein [Nonlabens dokdonensis DSW-6]
gi|442799620|gb|AGC75425.1| signal recognition protein [Nonlabens dokdonensis DSW-6]
Length = 430
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 150/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ DV + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 188 MMTEIADVHAAIKPQETLFVVDAMTGQDAVNTAKAFNDRLNFDGVVLTKLDGDTRGGAAL 247
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A ++
Sbjct: 248 SIKTVVNKPIKFIGTGEKMEALDVFYPERMADRILGMGDVVSLVERAQEQYDEEEARKLS 307
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MG+M ++GMIPG GK+ V + + K +EA+I +
Sbjct: 308 KKIAKNQFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKMLK-DVDIDDDAFKGIEAIIHS 366
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MT EER KP+++ S R+KR+A+ SG T +V+QL+ Q
Sbjct: 367 MTVEERTKPQVINGS--RKKRIAKGSGTTVTEVNQLLKQF 404
>gi|227553504|ref|ZP_03983553.1| signal recognition particle protein [Enterococcus faecalis HH22]
gi|227177374|gb|EEI58346.1| signal recognition particle protein [Enterococcus faecalis HH22]
Length = 442
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 164/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAAL
Sbjct: 172 LMDELKQIKELADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAAL 231
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+
Sbjct: 232 SIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELA 291
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +FDFNDF++Q V MG + ++ MIPGM + + V+ K + AM+
Sbjct: 292 QKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVL 351
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 352 SMTPAERENPDLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 400
>gi|317049261|ref|YP_004116909.1| signal recognition particle protein [Pantoea sp. At-9b]
gi|316950878|gb|ADU70353.1| signal recognition particle protein [Pantoea sp. At-9b]
Length = 453
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 160/227 (70%), Gaps = 6/227 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+K V +NP E L VVDAMTGQ+AA FN + +TG ILTK+DGD+RGGAAL
Sbjct: 201 MMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKPIK +G GE+ E LEPFYPDR+A RILGMGDVLS +E + + +E AE++
Sbjct: 261 SIRHITGKPIKFMGVGEKTEALEPFYPDRIASRILGMGDVLSLIEDIESKVDREQAEKLA 320
Query: 121 KKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAM 177
KK+ + + FD NDFL+Q + + MG M+ ++G +PGMG++ P V+ +K L MEA+
Sbjct: 321 KKLKTGDGFDLNDFLEQLKQMRNMGGMASLMGKLPGMGQL-PDNVKSQMDDKLLVRMEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
I +MT +EREKPE++ S R++R+A SG Q V++L+ Q M+
Sbjct: 380 INSMTRKEREKPEIIKGS--RKRRIALGSGMQVQDVNRLLKQFDDMQ 424
>gi|86141178|ref|ZP_01059724.1| signal recognition particle protein [Leeuwenhoekiella blandensis
MED217]
gi|85831737|gb|EAQ50192.1| signal recognition particle protein [Leeuwenhoekiella blandensis
MED217]
Length = 442
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIHEAIKPQETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKTVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + + +MG+M +IGMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLKQIQQIKKMGNMKDLIGMIPGAGKALKG-LDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP+ER +P ++ S R+KR+++ SG + Q+V+QL+ Q
Sbjct: 379 MTPDERTQPSIINSS--RKKRISKGSGTSVQEVNQLLKQF 416
>gi|383480060|ref|YP_005388954.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|383493976|ref|YP_005411652.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
gi|378928050|gb|AFC66256.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|378929704|gb|AFC68121.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|258514481|ref|YP_003190703.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778186|gb|ACV62080.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 449
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 165/247 (66%), Gaps = 7/247 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK + P E+LLVVDAMTGQ+A + FN + + G I+TKLDGD+RGGAAL
Sbjct: 201 LMDELEAVKSEVKPNEILLVVDAMTGQDAVNVAEVFNRRMQLNGVIMTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK G GE+++ LE F+PDRMA RILGMGDVL+ +EKAQ E E+
Sbjct: 261 SVKAVTGCPIKFAGIGEKLDALETFHPDRMADRILGMGDVLTLIEKAQANFDAEKVAELN 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIE 179
KKI S F +DFL+Q + V ++G + +V+ M PGMG + + E EK L +EA+I+
Sbjct: 321 KKIRSMEFTLDDFLEQLQQVKKLGPLEQVLSMFPGMGGLKKIKNLEFDEKELVYVEAIIK 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG----VME 235
+MT +EREKPE++ S R+R+A+ SG + Q+V++L+ Q Q + MK + +
Sbjct: 381 SMTHKEREKPEIINGSC--RRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFSDIDKTIKK 438
Query: 236 GGSLPAL 242
GG +P +
Sbjct: 439 GGKMPKI 445
>gi|21910377|ref|NP_664645.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
gi|21904574|gb|AAM79448.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
Length = 520
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|433546093|ref|ZP_20502431.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
gi|432182709|gb|ELK40272.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
Length = 471
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 160/233 (68%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK ++ V P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAAL
Sbjct: 201 LMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M+
Sbjct: 261 SVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++ F F+ FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++
Sbjct: 321 RQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
MT ER P+LL S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 380 MTKAERANPDLLNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFSGV 430
>gi|386362728|ref|YP_006072059.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|421892475|ref|ZP_16323130.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
gi|350277137|gb|AEQ24505.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|379981771|emb|CCG26852.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
Length = 520
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|422022029|ref|ZP_16368538.1| signal recognition particle protein [Providencia sneebia DSM 19967]
gi|414097779|gb|EKT59432.1| signal recognition particle protein [Providencia sneebia DSM 19967]
Length = 453
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+K+V R++NP E L VVDAMTGQ+AA FN + +TG +LTK+DGD+RGGAAL
Sbjct: 201 MMDEIKEVHRIINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++GKPIK +G GE+ + LEPF+P+R+A RILGMGDVLS +E+ + + ++ AE++
Sbjct: 261 SIRSITGKPIKFLGVGEKTDALEPFHPERVASRILGMGDVLSLIEEIEHKVDRDQAEKLA 320
Query: 121 KKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI-MEAMI 178
KK+ + + FD NDFL Q + + MG M+ ++ IPGM ++ A + + + I MEAMI
Sbjct: 321 KKLKTGDGFDLNDFLSQLKQMRNMGGMASMMSKIPGMSQVPDAVKSQMDDKVTIRMEAMI 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 224
+MT +EREKPE++ S R++R+A SG T Q+V++L+ Q M+
Sbjct: 381 NSMTRKEREKPEIIKGS--RKRRIAAGSGTTVQEVNRLLKQFDDMQ 424
>gi|317121794|ref|YP_004101797.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
gi|315591774|gb|ADU51070.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
Length = 445
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 168/238 (70%), Gaps = 5/238 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ +++ + P E+LLVVDAMTGQ+A + TF+ +GI G +LTKLDGD+RGGAAL
Sbjct: 201 LMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVVLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ V+G+PIK VG GER++ LEPF+P+RMA RILGMGDVLS +EKAQ + A+ ++
Sbjct: 261 SVRAVTGRPIKFVGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAAFDAQQAQRLE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
+K+ FD DFL+Q R V +MG + +++ MIPG+G ++ V E E L+ +EA+I+
Sbjct: 321 RKLREQTFDLEDFLEQLRQVRKMGPLDQLLAMIPGLGPRLKDVTVDEGE--LRRIEAIIQ 378
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 237
+MTPEER PE++ S RR+R+A+ SG Q V++L+ Q + + MK + G G
Sbjct: 379 SMTPEERRHPEIINAS--RRRRIARGSGTRVQDVNRLLKQFAETQRLMKQVTGAARRG 434
>gi|422422505|ref|ZP_16499458.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
gi|313637361|gb|EFS02841.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
Length = 450
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M+
Sbjct: 262 SIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 322 QKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 382 SMTKNEKDYPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|268316589|ref|YP_003290308.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
gi|262334123|gb|ACY47920.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
Length = 450
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 161/245 (65%), Gaps = 3/245 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 204 MMQEVEQIKEAVRPHEILFVVDSMTGQDAVNTAKAFNERLDFDGVVLTKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK GE+++ L PFYPDRMA RILGMGDV+S VE+AQE AE+++
Sbjct: 264 SIRSVVNKPIKFASTGEKLDALTPFYPDRMAQRILGMGDVISLVERAQEQYDARQAEKLR 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ SA+F+ DF +Q + + +MGS+ +IGMIPG+G+ + + + K +EAMI +
Sbjct: 324 RKLRSADFNLEDFYEQLQRIKKMGSLRELIGMIPGLGRYVK-DLDVDDDAFKHIEAMILS 382
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P+++ S RR+R+A+ SG V+QL+ Q +MR MK++ +M G
Sbjct: 383 MTPEERRNPDIIDAS--RRRRIARGSGMEVSDVNQLLRQFKEMRKMMKSMSKLMGKGRAV 440
Query: 241 ALSNL 245
L L
Sbjct: 441 DLRQL 445
>gi|346226274|ref|ZP_08847416.1| signal recognition particle protein [Anaerophaga thermohalophila
DSM 12881]
Length = 443
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 156/228 (68%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MMDE+ +K + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+
Sbjct: 200 MMDEIAAIKDAVKPHETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++Q
Sbjct: 260 SIRSVVDKPIKFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDAEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F+F+DF+ Q R + +MG++ + GMIPGMGK+ V + + K +EA+I +
Sbjct: 320 KKIAKNQFNFDDFIGQIRQIKKMGNLKDLAGMIPGMGKMLK-NVDIDDDAFKGVEAIISS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER++P ++ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 379 MTPEERQQPSIINGS--RRKRIAAGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|445376096|ref|ZP_21426599.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
gi|445390916|ref|ZP_21428322.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750040|gb|ELW74892.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750146|gb|ELW74983.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
Length = 520
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K +P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ M+PGM P A V+ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 LSMTPEERENPNLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|335031105|ref|ZP_08524560.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
gi|333770419|gb|EGL47456.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
Length = 516
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 162/240 (67%), Gaps = 12/240 (5%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEA 176
+KI FDFNDF+ Q V MG M ++ MIPGM PA +V E E + K A
Sbjct: 322 EKIRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RA 378
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
++ +MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 379 IVSSMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|423395854|ref|ZP_17373055.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|423406730|ref|ZP_17383879.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
gi|401653596|gb|EJS71140.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|401660020|gb|EJS77503.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
Length = 449
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK + P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKLEREQPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|289435144|ref|YP_003465016.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171388|emb|CBH27932.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 450
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEIANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M+
Sbjct: 262 SIRSVTGKPIKFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 322 QKMKDNSMTLDDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 382 SMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFNEMKKMMKQM 430
>gi|386820840|ref|ZP_10108056.1| signal recognition particle protein [Joostella marina DSM 19592]
gi|386425946|gb|EIJ39776.1| signal recognition particle protein [Joostella marina DSM 19592]
Length = 442
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ ++ + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEISNIHTAITPNETLFVVDSMTGQDAVNTAKAFNDVLDFNGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLH 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLSQIQQIKKMGSMKDLLGMIPGAGKALKGMDID-DDAFKGVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P LL S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 379 MTPSERSNPSLLNGS--RKKRIAKGSGTSIQEVNQLLKQF 416
>gi|291519525|emb|CBK74746.1| signal recognition particle protein [Butyrivibrio fibrisolvens
16/4]
Length = 446
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 162/237 (68%), Gaps = 7/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL +K ++ +LVVDAMTGQ+A + +TF+ +IGI G I+TKLDGD+RGGAAL
Sbjct: 202 MMNELASIKSNIDILNTILVVDAMTGQDAVNVSSTFDEKIGIDGVIITKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G GE++ DLE F+PDRMA RILGMGDVLS +EKA+ + ++ A +
Sbjct: 262 SIKAVTGKPILYAGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEAEIDKDAALALS 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMI 178
KK+ A+FDFND+L + ++G ++ ++GM+PGM AQ+ A +K L +EA+I
Sbjct: 322 KKVKKASFDFNDYLTSMEQMKKLGGLTSILGMMPGMNASQMAQLENAVDDKKLAHIEAII 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK---NLMG 232
+MTP ERE P+LL +P R+ R+A +G +V++ V Q Q + MK N+MG
Sbjct: 382 LSMTPAERENPKLL--NPSRKHRIAAGAGLDIAEVNRFVKQFEQSKKMMKQMPNMMG 436
>gi|212550936|ref|YP_002309253.1| signal recognition particle protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549174|dbj|BAG83842.1| signal recognition particle protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 439
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 156/230 (67%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K+ +NP E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAAL
Sbjct: 200 MMEEIASIKKAINPDEILFVVDSMTGQDAVNTAKEFNNRLDFSGIVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK V RGE+ME ++ F+P RMA RILGMGD++S VEKAQE + A ++
Sbjct: 260 SIRAVVNKPIKFVSRGEKMESIDIFHPKRMADRILGMGDIVSLVEKAQEQYNEGLARRLK 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+I FDF+DFL Q + + +MG++ +I M+PGMGK+ ++ + + K +E +I +
Sbjct: 320 KRIAKNQFDFDDFLIQIQQIKKMGNLRDLISMLPGMGKMVK-EIDVDDNAFKKIEEIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ER P +L S R+ R+A+ SGK +V+QL+ Q Q+R MK +
Sbjct: 379 MTPTERANPSILNSS--RKSRIAKGSGKKISEVNQLLKQFEQIRKMMKTM 426
>gi|422758876|ref|ZP_16812638.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411711|gb|EFY02619.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 520
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKYTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANMKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|313896220|ref|ZP_07829773.1| signal recognition particle protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|402303273|ref|ZP_10822369.1| signal recognition particle protein [Selenomonas sp. FOBRC9]
gi|312975019|gb|EFR40481.1| signal recognition particle protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|400378903|gb|EJP31753.1| signal recognition particle protein [Selenomonas sp. FOBRC9]
Length = 458
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 160/224 (71%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + F+ +G+ G ++TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVQPHEILLVVDAMTGQEAVNVAAAFDASLGLDGIVMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G+P+K VG GE+++ LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGRPVKFVGMGEKLDPLEVFHPDRMASRILGMGDVLSLVEKAQENFDIENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL+Q + + ++GS++ ++GMIPGMG K+ ++ K ++ +EA
Sbjct: 320 EKLRKNDFTLDDFLEQMQQIKKLGSLNNILGMIPGMGGLKKKLGDQELDLDGKEMRRLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQF 421
>gi|15606801|ref|NP_214181.1| signal recognition particle receptor protein [Aquifex aeolicus VF5]
gi|6226155|sp|O67615.1|SRP54_AQUAE RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|2984037|gb|AAC07579.1| signal recognition particle receptor protein [Aquifex aeolicus VF5]
Length = 454
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 167/247 (67%), Gaps = 10/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+++K V NP+E+L V DAM GQ A TF+ +G+TG ++TK+DGD+RGG AL
Sbjct: 195 LMKELQEIKEVTNPSEILYVADAMQGQTALETAKTFHERLGLTGVVITKMDGDARGGLAL 254
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEV G PIK +G GE++ED+EPFYPDR+A RILG+GD+ S VEKAQEV+ ++ A+ M
Sbjct: 255 SVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQRILGLGDIQSLVEKAQEVITEDKAQVMA 314
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
K+M+ FD D + R + +MG + +++ MIPG + P ++ EK K +EA+I
Sbjct: 315 TKVMTGEFDLEDLREMLRMIQQMGPLDKLLSMIPG---VAPQLKHLKVDEKQFKKIEAII 371
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MTPEER P+++ S R+KR+A+ SG T V++L+ + +M+ M+ L + G
Sbjct: 372 NSMTPEERRNPKIINMS--RKKRIARGSGTTVSDVNKLLKRYEEMKKMMRKL---QKAGG 426
Query: 239 LPALSNL 245
+PA+ +
Sbjct: 427 MPAIPKM 433
>gi|419453246|ref|ZP_13993219.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
gi|379626955|gb|EHZ91571.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
Length = 514
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 193 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 252
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 253 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 312
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 313 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 371
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 372 SSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 424
>gi|307718738|ref|YP_003874270.1| hypothetical protein STHERM_c10520 [Spirochaeta thermophila DSM
6192]
gi|306532463|gb|ADN01997.1| hypothetical protein STHERM_c10520 [Spirochaeta thermophila DSM
6192]
Length = 443
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL + R L+P E LLV DAMTGQ A + FN +GITG +LTK D D+RGGAAL
Sbjct: 201 LMDELSRLVRDLSPDETLLVADAMTGQTAVDVAKAFNEAVGITGVVLTKFDSDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++G PIK +G GE+++DLEPFYPDR+A RILGMGDV++ VEKA+E+ + E+AE++Q
Sbjct: 261 SIRTITGAPIKFIGVGEKVDDLEPFYPDRIASRILGMGDVVTLVEKARELTEAEEAEKLQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI A F D+L+Q + + +MGS+ ++ ++PGM Q + EK+++ EA+I +
Sbjct: 321 EKIKKATFTLEDYLEQFQKIKKMGSLQKLAELVPGMQAALGGQEID-EKAVRREEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
MTP ER P+++ P R+KR+A+ SG + +V++L+ + R+ MK ++
Sbjct: 380 MTPAERRNPKIIG--PSRKKRIARGSGTSVYEVNRLLKNFEKTRLMMKKML 428
>gi|227486503|ref|ZP_03916819.1| signal recognition particle protein Ffh [Anaerococcus lactolyticus
ATCC 51172]
gi|227235506|gb|EEI85521.1| signal recognition particle protein Ffh [Anaerococcus lactolyticus
ATCC 51172]
Length = 446
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 157/223 (70%), Gaps = 2/223 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K V+ P E+LLVVDAMTGQEA + +F+ + ITG ILTKLDGD+RGGAAL
Sbjct: 200 LMDELKAIKEVVKPDEILLVVDAMTGQEAVNVAKSFDDYLDITGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V GKPIK +G GE+++DLEPFYPDRMA RILGMGDVLS +EKA+E E+A++++
Sbjct: 260 SIRQVVGKPIKFIGVGEKLDDLEPFYPDRMASRILGMGDVLSLIEKAEEQFSLENAKKLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K+ + +DF++Q + + MG + ++ MIPG+ V + +EA+I +
Sbjct: 320 AKMREQTYSLDDFMEQIQQIRNMGPLEDLLAMIPGVNSKMLKGVNVDDAGFDKIEALINS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 223
MT EER+KPE++ S R+ R++ SG +++++L+ Q ++
Sbjct: 380 MTKEERDKPEIIGNS--RKTRISNGSGVDVRELNKLLKQFKEL 420
>gi|417698687|ref|ZP_12347859.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|419493436|ref|ZP_14033162.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|419506198|ref|ZP_14045859.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|421227494|ref|ZP_15684198.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|421268335|ref|ZP_15719205.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
gi|332200732|gb|EGJ14804.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|379593611|gb|EHZ58423.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|379608112|gb|EHZ72858.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|395595196|gb|EJG55430.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|395869830|gb|EJG80944.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
Length = 523
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|311068118|ref|YP_003973041.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|419823901|ref|ZP_14347434.1| signal recognition particle protein [Bacillus atrophaeus C89]
gi|310868635|gb|ADP32110.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|388471938|gb|EIM08728.1| signal recognition particle protein [Bacillus atrophaeus C89]
Length = 446
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELANVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+L+ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDLINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|212639591|ref|YP_002316111.1| signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
gi|212561071|gb|ACJ34126.1| Signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
Length = 446
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 160/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A+F +DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I
Sbjct: 322 QKMRTASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 382 SMTKEEKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|329114608|ref|ZP_08243367.1| Signal recognition particle protein [Acetobacter pomorum DM001]
gi|326696088|gb|EGE47770.1| Signal recognition particle protein [Acetobacter pomorum DM001]
Length = 481
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 162/230 (70%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE++ ++ V +P E LLVVDAMTGQ+A FN +G+TG ++T++DGDSRGGAAL
Sbjct: 216 LMDEVRQIRDVTHPAETLLVVDAMTGQDAVNTAKAFNEAVGVTGVVMTRMDGDSRGGAAL 275
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++G PIKL+G GE+++ L+ FYP+R+AGRILG+GD+ VEKA + + QE+ E +
Sbjct: 276 SMRAITGAPIKLIGTGEKLDGLDEFYPERVAGRILGLGDIAGLVEKAADTLDQEEGERLA 335
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKS-LKIMEAMI 178
+K+M+ FD +D+ Q R + ++GS+S ++GM+PGMGK+ A ++ + S LK A+I
Sbjct: 336 QKMMAGKFDLDDYASQIRQINKLGSISGILGMLPGMGKVKEALGDKDLDTSILKKHLAII 395
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MT ER+KP ++ S R+KR+A SG T Q V++L+ Q M MK
Sbjct: 396 SSMTKAERKKPAIIKAS--RKKRIAAGSGSTVQDVNKLLKQFDMMSSMMK 443
>gi|320530761|ref|ZP_08031805.1| signal recognition particle protein [Selenomonas artemidis F0399]
gi|320137048|gb|EFW28986.1| signal recognition particle protein [Selenomonas artemidis F0399]
Length = 458
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 160/224 (71%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQEA + F+ +G+ G ++TKLDGD+RGGAAL
Sbjct: 200 LMQELRDIKAAVQPHEILLVVDAMTGQEAVNVAAAFDASLGLDGIVMTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+G+P+K VG GE+++ LE F+PDRMA RILGMGDVLS VEKAQE E+A++M+
Sbjct: 260 SIKAVTGRPVKFVGMGEKLDPLEVFHPDRMASRILGMGDVLSLVEKAQENFDIENAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
+K+ +F +DFL+Q + + ++GS++ ++GMIPGMG K+ ++ K ++ +EA
Sbjct: 320 EKLRKNDFTLDDFLEQMQQIKKLGSLNNILGMIPGMGGLKKKLGDQELDLDGKEMRRLEA 379
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I AMTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 380 IIRAMTPKERADITIINGS--RRKRIAAGSGTRVQDVNKLLKQF 421
>gi|418323809|ref|ZP_12935071.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
gi|365229155|gb|EHM70318.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
Length = 455
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 169/231 (73%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL++VK V P E++LVVDAMTGQ+A + +F+ ++ ++ LTKLDGD+RGGAAL
Sbjct: 202 LMNELQEVKEVSKPNEIMLVVDAMTGQDAVNVAESFDNQLDVSSVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + +E A++++
Sbjct: 262 SIRSVTQKPIKFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEEKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ +++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I+
Sbjct: 322 KKMRTSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ERE P +L S R+KR+A+ SG+T Q+V++L+ Q +M+ MK
Sbjct: 382 SMTPTERENPAVLNVS--RKKRIAKGSGRTLQEVNRLMKQFNEMKKMMKQF 430
>gi|126662097|ref|ZP_01733096.1| signal recognition particle protein [Flavobacteria bacterium BAL38]
gi|126625476|gb|EAZ96165.1| signal recognition particle protein [Flavobacteria bacterium BAL38]
Length = 448
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 5/221 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +V + + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMNEIAEVHKAIQPEETLFVVDAMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYP+RMA RILGMGDV+S VE+AQE +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPNRMADRILGMGDVVSLVERAQEQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MG+M ++GMIPG GK V + + K +EA+I++
Sbjct: 320 KKIAKNEFGFDDFLAQIQQIKKMGNMKDLVGMIPGAGK-ALKDVEIEDDAFKHIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRK-RVAQDSGKTEQQVSQLVAQL 220
MTP ER KP L+ V+RK R+A+ SG +QV+QL+ Q
Sbjct: 379 MTPIERSKPSLI---DVKRKTRIAKGSGTKIEQVNQLMKQF 416
>gi|423317353|ref|ZP_17295258.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
gi|405581486|gb|EKB55515.1| signal recognition particle protein [Bergeyella zoohelcum ATCC
43767]
Length = 455
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+K V ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIKTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++
Sbjct: 260 TIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVISLVERAQEQFDEEEAKKLH 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMG+M ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIAKNEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAI-KDVDINDDAFKHIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER KP ++ + R+ R+A+ SG+ + V+QL+ Q
Sbjct: 379 MTPEERRKPSII--NTQRKNRIAKGSGRKIEDVNQLMKQF 416
>gi|332524016|ref|ZP_08400268.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
gi|332315280|gb|EGJ28265.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
Length = 517
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMTELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASHEYDEQKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKIDEKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT ERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 382 SMTKAERENPDLL--NPSRRRRIAAGSGNSFVDVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|395453961|dbj|BAM30300.1| signal recognition particle subunit [Streptococcus pyogenes M1 476]
Length = 529
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 160/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|423283582|ref|ZP_17262466.1| signal recognition particle protein [Bacteroides fragilis HMW 615]
gi|404580868|gb|EKA85575.1| signal recognition particle protein [Bacteroides fragilis HMW 615]
Length = 439
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 158/242 (65%), Gaps = 3/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTPEER P +L S RR R+A+ SG T Q+V++L+ Q Q R MK + G +P
Sbjct: 379 MTPEERSNPGILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTSSKIGKMMP 436
Query: 241 AL 242
+
Sbjct: 437 KM 438
>gi|148655435|ref|YP_001275640.1| signal recognition particle protein [Roseiflexus sp. RS-1]
gi|148567545|gb|ABQ89690.1| signal recognition particle subunit FFH/SRP54 (srp54) [Roseiflexus
sp. RS-1]
Length = 444
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 168/242 (69%), Gaps = 7/242 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ + ++P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAAL
Sbjct: 200 LMAELEQINAAVDPVERLLVVDAMIGQEAVRVAEEFNRRVGLTGVIFTKVDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 118
SV+ V+G PIK +G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +
Sbjct: 260 SVRAVTGVPIKFLGSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARK 319
Query: 119 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMI 178
MQKK++ +FDF DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I
Sbjct: 320 MQKKLVKGSFDFEDFLVSMQQMRKLGPLQQILGMIPGLDKLAREEI-ITEKDLKKIEAII 378
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER P+L+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG
Sbjct: 379 FSMTKEERRNPDLIKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGI 434
Query: 239 LP 240
P
Sbjct: 435 DP 436
>gi|440751304|ref|ZP_20930538.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
gi|436480168|gb|ELP36425.1| Signal recognition particle, subunit Ffh SRP54 [Mariniradius
saccharolyticus AK6]
Length = 445
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 166/247 (67%), Gaps = 8/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K+ LNP+E L VVD+MTGQ+A TF+ + G +LTKLDGD+RGGAA+
Sbjct: 199 MMQEIEALKKALNPSETLFVVDSMTGQDAVNTAKTFDERLNFDGVVLTKLDGDTRGGAAI 258
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK + GE+ME+++ F+PDRMA RILGMGDV+S VE+AQ+ +E+A+ +
Sbjct: 259 SIRHVVNKPIKFISTGEKMENIDVFHPDRMAQRILGMGDVISLVERAQQSFDEEEAKRIN 318
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI F+F+DFL Q V +MG++ ++GMIPGM K+ + + S K +EA+I +
Sbjct: 319 AKIRKNQFNFDDFLSQLEQVKKMGNIKDLMGMIPGMNKMMKG-LDIDDDSFKPIEAIIRS 377
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--NLMGVME--- 235
MTP+ERE P+++ S RRKR+A SG+ +V+ L+ Q MR MK N MG +
Sbjct: 378 MTPKERENPDIIDGS--RRKRLAAGSGRNITEVNNLMKQFDDMRKLMKQMNKMGGAQKAL 435
Query: 236 GGSLPAL 242
GG +P +
Sbjct: 436 GGMMPKM 442
>gi|433446055|ref|ZP_20410186.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
gi|432000800|gb|ELK21692.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
Length = 446
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 160/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQIKEVTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQTAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A+F +DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I
Sbjct: 322 QKMRTASFTLDDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ P+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 382 SMTKEEKMNPDIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|345019917|ref|ZP_08783530.1| signal recognition particle [Ornithinibacillus scapharcae TW25]
Length = 449
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ +K +NP E+ LVVDAMTGQ+A + +FN ++ I+G I+TKLDGD+RGGAAL
Sbjct: 202 LMQELEQIKDTVNPDEIFLVVDAMTGQDAVNVAESFNEQLDISGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GK IK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+ ++
Sbjct: 262 SIKAVTGKSIKFAGMGEKLDQLEPFHPERMASRILGMGDVLTLIEKAQSSVDEKQAKALE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F+DFL+Q V +MG + ++ MIPG K+ + V+ EK L +EA+I+
Sbjct: 322 EKMRNATFTFDDFLEQMSQVKKMGPLDDLLAMIPGANKMKGLKNVQFDEKQLSHVEAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER+ P ++ S R+KR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 382 SMTKKERQDPTIMNAS--RKKRIAKGSGTSVSQVNRLLKQFDEMKKMMKQM 430
>gi|302344587|ref|YP_003809116.1| signal recognition particle protein [Desulfarculus baarsii DSM
2075]
gi|301641200|gb|ADK86522.1| signal recognition particle protein [Desulfarculus baarsii DSM
2075]
Length = 445
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M +L+ +K+ L P E+LLV DAMTGQ+A + F+ +G++G +LTK++GD+RGGAAL
Sbjct: 200 LMAQLERIKQKLQPGEILLVADAMTGQDAVNVAEAFHQRLGLSGVVLTKVEGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIKLVG GE+++ LEPF+PDRMAGRILGMGDVLS VEKA +QE A+ +
Sbjct: 260 SIRAVTGVPIKLVGVGEKLDALEPFHPDRMAGRILGMGDVLSLVEKAASAFEQEKAQALA 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ FD DF +Q R + ++GS+ ++GM+PG GK+ + ++ EK + +EA+I
Sbjct: 320 KKMAKNEFDLEDFREQIRQIRKLGSLESILGMLPGAGKLKGMKDMQPDEKEIGRVEAIIS 379
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MTP ER KP+++ S RRKR+A SG T V++L+ Q + MK +
Sbjct: 380 SMTPGERAKPQIIDAS--RRKRIAAGSGVTVADVNRLLKNFTQAKKMMKQV 428
>gi|94988647|ref|YP_596748.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94992471|ref|YP_600570.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|417856844|ref|ZP_12501903.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|94542155|gb|ABF32204.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94545979|gb|ABF36026.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|387933799|gb|EIK41912.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 522
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 204 LMEELRDVKALAQPDEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 264 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 324 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 383
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 384 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|373108348|ref|ZP_09522630.1| signal recognition particle protein [Myroides odoratimimus CCUG
10230]
gi|423130007|ref|ZP_17117682.1| signal recognition particle protein [Myroides odoratimimus CCUG
12901]
gi|423133700|ref|ZP_17121347.1| signal recognition particle protein [Myroides odoratimimus CIP
101113]
gi|423329251|ref|ZP_17307058.1| signal recognition particle protein [Myroides odoratimimus CCUG
3837]
gi|371646465|gb|EHO11976.1| signal recognition particle protein [Myroides odoratimimus CCUG
10230]
gi|371647520|gb|EHO13024.1| signal recognition particle protein [Myroides odoratimimus CCUG
12901]
gi|371648092|gb|EHO13584.1| signal recognition particle protein [Myroides odoratimimus CIP
101113]
gi|404603651|gb|EKB03305.1| signal recognition particle protein [Myroides odoratimimus CCUG
3837]
Length = 446
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + + P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEIANIHKAITPHETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+ME ++ FYPDRMA RILGMGDV+S VE+AQ +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMEAIDVFYPDRMADRILGMGDVISLVERAQAQYDEEEARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + V +MG+M ++GMIPG+GK V + + K +EA+I +
Sbjct: 320 KKIAKNEFGFDDFLNQIQQVKKMGNMKDLMGMIPGVGK-AMKDVEIEDDAFKHIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER KP ++ R+ R+A+ SG QQV+QL+ Q
Sbjct: 379 MTPAERSKPSII--DVKRKNRIAKGSGTDIQQVNQLLKQF 416
>gi|229086398|ref|ZP_04218574.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
gi|228696914|gb|EEL49723.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
Length = 449
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKIEREQPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|384439488|ref|YP_005654212.1| Signal recognition particle protein [Thermus sp. CCB_US3_UF1]
gi|359290621|gb|AEV16138.1| Signal recognition particle protein [Thermus sp. CCB_US3_UF1]
Length = 434
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 161/230 (70%), Gaps = 7/230 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL +K +NP EVLLV+DAMTGQEA A+ F+ +G+TG ILTKLDGD+RGGAAL
Sbjct: 198 LMAELARLKEAMNPDEVLLVLDAMTGQEALAVARAFDERVGVTGLILTKLDGDARGGAAL 257
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S + V+GKPI G E+ E LEPFYPDR+AGRILGMGDV + EK ++ + +A +
Sbjct: 258 SARHVTGKPIYFAGVSEKPEGLEPFYPDRLAGRILGMGDVATLAEKVRQAGLEAEAPKAA 317
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K++ DFL+Q +++ R+GS S ++G++PG+GK P V+ +K+LK +EA++ +
Sbjct: 318 KELT-----LEDFLRQMQSLKRLGSFSEILGLLPGVGKALPQGVQVDDKALKRLEAIVLS 372
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTPEER+ P +L S RRKR+A+ SG T Q+V++L+ + + MK+L
Sbjct: 373 MTPEERKDPRILNGS--RRKRIAKGSGTTVQEVNRLIKAFEETKALMKSL 420
>gi|228992573|ref|ZP_04152500.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
gi|228998621|ref|ZP_04158208.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|229006121|ref|ZP_04163809.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228755197|gb|EEM04554.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228761089|gb|EEM10048.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|228767207|gb|EEM15843.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
Length = 449
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 166/236 (70%), Gaps = 7/236 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+ PIK G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIKAVTNTPIKFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAM 177
+K+ + +F +DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+
Sbjct: 322 QKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAI 379
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
I +MT ERE PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 380 IRSMTKVEREHPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|383754320|ref|YP_005433223.1| putative signal recognition particle protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366372|dbj|BAL83200.1| putative signal recognition particle protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 460
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 156/224 (69%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K + P E+LLVVDAMTGQE+ + TFN +G+ G I+TKLDGD+RGGAAL
Sbjct: 201 LMQELRDIKAEVKPHEILLVVDAMTGQESVNVAQTFNESLGLDGVIMTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK VG GE++E L+PF+PDRMA RILGMGDVLS VEKAQ+ E+A++M+
Sbjct: 261 SVKAVTNVPIKFVGVGEKLEPLQPFHPDRMASRILGMGDVLSLVEKAQQTFDMEEAKKME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
KK+ F +DFL Q + V ++GS+ ++GMIPGMG ++ + K ++ +EA
Sbjct: 321 KKLRKDEFTLDDFLSQMQQVKKLGSLENILGMIPGMGGLKKQLEGQDIDLDGKEMRQIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I +MTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 381 IIRSMTPKERADITIINGS--RRKRIAMGSGTRVQDVNKLLKQF 422
>gi|288553090|ref|YP_003425025.1| signal recognition particle protein [Bacillus pseudofirmus OF4]
gi|288544250|gb|ADC48133.1| signal recognition particle [Bacillus pseudofirmus OF4]
Length = 452
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL++VK + P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAA+
Sbjct: 202 LMGELQEVKEIAKPDEILLVVDAMTGQDAVNVAESFNEQLDVTGVVLTKLDGDTRGGAAI 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ + +E A E++
Sbjct: 262 SVKAVTNTPIKFAGMGEKIDQLEPFYPDRMASRILGMGDMLTLIEKAQSNVDEEKARELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ + +F F+DFL+Q V MG + ++ M+PGM K + ++ +K L +EA++
Sbjct: 322 KKMRTMDFTFDDFLEQLDQVKSMGPLDEILNMMPGMNKAKGLKDLKVDDKQLVRVEAIVR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P L+ S RR+R+A+ SG T Q V++L+ Q M+ MK +
Sbjct: 382 SMTKAEKQDPSLMNAS--RRRRIAKGSGTTIQDVNRLLKQFEDMKKMMKQM 430
>gi|423278258|ref|ZP_17257172.1| signal recognition particle protein [Bacteroides fragilis HMW 610]
gi|424664217|ref|ZP_18101253.1| signal recognition particle protein [Bacteroides fragilis HMW 616]
gi|404575799|gb|EKA80540.1| signal recognition particle protein [Bacteroides fragilis HMW 616]
gi|404586268|gb|EKA90841.1| signal recognition particle protein [Bacteroides fragilis HMW 610]
Length = 439
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 153/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER P +L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPEERSNPAILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|150006884|ref|YP_001301627.1| signal recognition protein [Parabacteroides distasonis ATCC 8503]
gi|255016084|ref|ZP_05288210.1| putative signal recognition protein [Bacteroides sp. 2_1_7]
gi|256842126|ref|ZP_05547631.1| signal recognition particle protein [Parabacteroides sp. D13]
gi|262384367|ref|ZP_06077502.1| signal recognition particle protein [Bacteroides sp. 2_1_33B]
gi|298377310|ref|ZP_06987263.1| signal recognition particle protein [Bacteroides sp. 3_1_19]
gi|301308707|ref|ZP_07214659.1| signal recognition particle protein [Bacteroides sp. 20_3]
gi|410104961|ref|ZP_11299871.1| signal recognition particle protein [Parabacteroides sp. D25]
gi|423335292|ref|ZP_17313069.1| signal recognition particle protein [Parabacteroides distasonis
CL03T12C09]
gi|423338644|ref|ZP_17316386.1| signal recognition particle protein [Parabacteroides distasonis
CL09T03C24]
gi|149935308|gb|ABR42005.1| putative signal recognition protein [Parabacteroides distasonis
ATCC 8503]
gi|256736442|gb|EEU49771.1| signal recognition particle protein [Parabacteroides sp. D13]
gi|262294070|gb|EEY82003.1| signal recognition particle protein [Bacteroides sp. 2_1_33B]
gi|298265724|gb|EFI07384.1| signal recognition particle protein [Bacteroides sp. 3_1_19]
gi|300833231|gb|EFK63849.1| signal recognition particle protein [Bacteroides sp. 20_3]
gi|409225055|gb|EKN17978.1| signal recognition particle protein [Parabacteroides distasonis
CL03T12C09]
gi|409233181|gb|EKN26021.1| signal recognition particle protein [Parabacteroides sp. D25]
gi|409233609|gb|EKN26444.1| signal recognition particle protein [Parabacteroides distasonis
CL09T03C24]
Length = 445
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 161/243 (66%), Gaps = 4/243 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKSAIQPDETLFVVDAMTGQDAVNTAREFNERLNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVDKPIKFVGTGEKMDALDIFHPERMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFISQIQQIKKMGNLKELASMIPGVGKALK-DVDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SL 239
MTP+ER P +L S RR+R+A+ SG + Q+V++L+ Q + R M+ L G L
Sbjct: 379 MTPDERSNPAILNGS--RRQRIAKGSGTSIQEVNKLIKQFDETRKMMRMLTSAKSGKMKL 436
Query: 240 PAL 242
P++
Sbjct: 437 PSM 439
>gi|154686014|ref|YP_001421175.1| hypothetical protein RBAM_015810 [Bacillus amyloliquefaciens FZB42]
gi|385264724|ref|ZP_10042811.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|394993936|ref|ZP_10386675.1| signal recognition particle protein [Bacillus sp. 916]
gi|429505149|ref|YP_007186333.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|154351865|gb|ABS73944.1| Ffh [Bacillus amyloliquefaciens FZB42]
gi|385149220|gb|EIF13157.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|393805260|gb|EJD66640.1| signal recognition particle protein [Bacillus sp. 916]
gi|429486739|gb|AFZ90663.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 446
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 170/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELSGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|443632733|ref|ZP_21116912.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347556|gb|ELS61614.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 446
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTNTPIKFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|399923725|ref|ZP_10781083.1| signal recognition particle protein [Peptoniphilus rhinitidis 1-13]
Length = 445
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 156/230 (67%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+ +NP+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAAL
Sbjct: 200 LMKELQDIHEEINPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK + GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E++
Sbjct: 260 SIRSVTDVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQNAVDDKKAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + F F DFL Q + + MG + +IGMIPG+ + E +EA+I +
Sbjct: 320 EKLRKSTFTFEDFLDQMQQMKNMGPLEDIIGMIPGVDNKALKNINLPENEFAKVEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER KPE++ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 380 MTKKERLKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|339497842|ref|ZP_08658818.1| signal recognition particle protein [Leuconostoc
pseudomesenteroides KCTC 3652]
Length = 491
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 154/229 (67%), Gaps = 5/229 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIAEIAKPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ E E+
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDAEAQEKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFAHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRM 227
+MTP+ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 GSMTPQERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMM 427
>gi|295094758|emb|CBK83849.1| signal recognition particle protein [Coprococcus sp. ART55/1]
Length = 448
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL ++K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAAL
Sbjct: 202 MMNELAEIKENLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V+GKPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM+
Sbjct: 262 SIKAVTGKPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K A+FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +
Sbjct: 322 QKFRKASFDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLS 380
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
MTP ER + + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 381 MTPRERSLQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|313889472|ref|ZP_07823120.1| signal recognition particle protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|416851751|ref|ZP_11908896.1| signal recognition particle protein [Streptococcus pseudoporcinus
LQ 940-04]
gi|313122304|gb|EFR45395.1| signal recognition particle protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|356739240|gb|EHI64472.1| signal recognition particle protein [Streptococcus pseudoporcinus
LQ 940-04]
Length = 517
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 159/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMTELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEQKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G A ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKIDEKQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT ERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 382 SMTKAERENPDLL--NPSRRRRIAAGSGNSFVDVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|357636864|ref|ZP_09134739.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
gi|357585318|gb|EHJ52521.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
Length = 517
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 156/233 (66%), Gaps = 5/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMAELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNKQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++G+PIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ E+
Sbjct: 262 SVRQITGRPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKTAELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM P A ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFVDQLDQVQNMGPMEDILKMIPGMAN-NPALANIKVDEQEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
+MTPEERE PELL +P RR+R+A SG T V++ + Q + M+ M
Sbjct: 381 SSMTPEERENPELL--NPSRRRRIASGSGNTFVNVNKFIKDFNQAKQMMQGAM 431
>gi|260890999|ref|ZP_05902262.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
gi|260859026|gb|EEX73526.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
Length = 445
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 164/228 (71%), Gaps = 2/228 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+K NP E+LLVVD MTGQ+A + FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 200 LMSELQDIKDSFNPNEILLVVDGMTGQDAVNVAKEFNEQLDITGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVKEV+GKPIK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + +++A++M+
Sbjct: 260 SVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDEKEAKKME 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K FDF DFLKQ + + +MGS++ ++ MIPG+ + + AEK +K +EA+I +
Sbjct: 320 EKFRKNQFDFEDFLKQFKMIRKMGSIAGIMKMIPGV-DTSMIDMGMAEKEMKKVEAIIFS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MT +ER P+LL R+ R+A+ SG V++L+ Q QM+ MK
Sbjct: 379 MTVQERRDPKLLKNGS-RKMRIAKGSGVQVNDVNKLIKQFEQMKQMMK 425
>gi|228474956|ref|ZP_04059684.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|314936601|ref|ZP_07843948.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|418620446|ref|ZP_13183250.1| signal recognition particle protein [Staphylococcus hominis VCU122]
gi|228270941|gb|EEK12329.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|313655220|gb|EFS18965.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|374822576|gb|EHR86596.1| signal recognition particle protein [Staphylococcus hominis VCU122]
Length = 456
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 174/251 (69%), Gaps = 3/251 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL DVK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAAL
Sbjct: 202 LMNELADVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++
Sbjct: 262 SIRAVTHKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ ++F +DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I+
Sbjct: 322 KKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ER+ P +L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G
Sbjct: 382 SMTPNERQDPAILNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKK 439
Query: 240 PALSNLEDALK 250
S +E+ LK
Sbjct: 440 GKRSQMENMLK 450
>gi|419784925|ref|ZP_14310683.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|383363526|gb|EID40858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
Length = 447
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 172/243 (70%), Gaps = 3/243 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAAL
Sbjct: 202 LMNELKEVKEIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++
Sbjct: 262 SIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ ++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I+
Sbjct: 322 KKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G +
Sbjct: 382 SMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKV 439
Query: 240 PAL 242
A+
Sbjct: 440 NAI 442
>gi|386346818|ref|YP_006045067.1| signal recognition particle protein [Spirochaeta thermophila DSM
6578]
gi|339411785|gb|AEJ61350.1| signal recognition particle protein [Spirochaeta thermophila DSM
6578]
Length = 443
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL + R L+P E LLV DAMTGQ A + FN +GITG +LTK D D+RGGAAL
Sbjct: 201 LMDELSRLVRDLSPDEALLVADAMTGQTAVDVAKAFNEAVGITGVVLTKFDSDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++G PIK +G GE+++DLEPFYPDR+A RILGMGDV++ VEKA+E+ + E+AE++Q
Sbjct: 261 SIRTITGAPIKFIGVGEKVDDLEPFYPDRIASRILGMGDVVTLVEKARELTEAEEAEKLQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI A F D+L+Q + + +MGS+ ++ ++PGM Q + EK+++ EA+I +
Sbjct: 321 EKIKKATFTLEDYLEQFQKIKKMGSLQKLAELVPGMEAALGGQEID-EKAIRREEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 231
MTP ER P ++ P R+KR+A+ SG + +V++L+ + R+ MK ++
Sbjct: 380 MTPAERRNPRIIG--PSRKKRIARGSGTSVYEVNRLLKNFEKTRLMMKKML 428
>gi|313115226|ref|ZP_07800709.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622455|gb|EFQ05927.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 451
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 4/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K + E LLVVDAM GQ+A + TFN ++GI G ILTK DGD+RGGAAL
Sbjct: 201 LMQELVDIKEAVPVDETLLVVDAMAGQDAVNVAKTFNEKVGIDGIILTKTDGDTRGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPIK G GE+++DL+ F+PDRMA RILGMGDVLS +E+AQE ++ AEE
Sbjct: 261 SVLAVTGKPIKFQGTGEKLDDLDVFHPDRMASRILGMGDVLSLIERAQETADEKAAEETA 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
K++M FD ND L Q + +MG ++ M+PG I P+QV EK+ +EAMI +
Sbjct: 321 KRMMENKFDMNDMLDQFAQIRKMGGAGAMLSMLPGGSGIDPSQVD--EKAFDRIEAMIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT EEREKP ++ +P R++R+A SG T V++L+ Q M+ MK
Sbjct: 379 MTKEEREKPSII--NPKRKRRIAAGSGTTVADVNKLLKQFEMMQKMMKQF 426
>gi|309792455|ref|ZP_07686919.1| signal recognition particle protein [Oscillochloris trichoides
DG-6]
gi|308225443|gb|EFO79207.1| signal recognition particle protein [Oscillochloris trichoides DG6]
Length = 460
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 156/219 (71%), Gaps = 4/219 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+ + P E LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAAL
Sbjct: 200 LMKELEDIDACVQPIERLLVVDAMTGQEAVRVAETFNQRVKVTGLVMTKMDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 118
SV+ V+G PIK + GE+++ LE F+PDR+A RILGMGDVLS +EKA+E+ E A+
Sbjct: 260 SVRSVTGVPIKFISSGEKIDLNTLEAFHPDRLASRILGMGDVLSLIEKAEEMYDAEQAKR 319
Query: 119 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMI 178
M+K++ FDF DFL + ++G + ++IGMIPG+ ++ + +EK LK++EA+I
Sbjct: 320 MEKRLRKGKFDFEDFLSAMHQMRKLGPLQQIIGMIPGLSQLARDEELVSEKQLKLIEAII 379
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
+MT EER PEL+ S RR+R+A+ SG + Q+VSQLV
Sbjct: 380 FSMTIEERRNPELIKGS--RRERIAKGSGTSVQEVSQLV 416
>gi|148985187|ref|ZP_01818426.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|387757611|ref|YP_006064590.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|418232322|ref|ZP_12858909.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|418236782|ref|ZP_12863350.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|419480169|ref|ZP_14019975.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|419499865|ref|ZP_14039559.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|147922632|gb|EDK73750.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|301800200|emb|CBW32808.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|353887049|gb|EHE66829.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|353893014|gb|EHE72762.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|379570740|gb|EHZ35701.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|379599173|gb|EHZ63956.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|429316237|emb|CCP35909.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034156]
gi|429319579|emb|CCP32862.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034183]
gi|429321396|emb|CCP34836.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994039]
gi|429323216|emb|CCP30877.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994038]
Length = 523
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM
Sbjct: 262 SVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ MIPGM PA ++ E+ + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT EERE P+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 381 SSMTSEERENPDLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|220928159|ref|YP_002505068.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
gi|219998487|gb|ACL75088.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
Length = 448
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 2/222 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAAL
Sbjct: 202 LMDELLNIKNTVKPHEILLVVDSMTGQDAVNVSKTFNEKLGIDGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++
Sbjct: 262 SVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ + F DFL Q + + +MG + ++GM+PG+ + EK + EA+I++
Sbjct: 322 KKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 222
MT +ER P ++ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 382 MTRKERLDPSIINGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|313888484|ref|ZP_07822151.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845513|gb|EFR32907.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 445
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 156/230 (67%), Gaps = 2/230 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+D+ L P+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAAL
Sbjct: 200 LMKELQDIHEALEPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK + GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E++
Sbjct: 260 SIRSVTDVPIKFIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQSAVDDKKAKELE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+K+ + F F DFL Q + + MG + +IGMIPGM + + +EA+I +
Sbjct: 320 EKLRKSTFTFEDFLDQMQQMKNMGPLEDIIGMIPGMNSKALKGISLPDNEFAKVEAIILS 379
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MT +ER+KPE++ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 380 MTKKERQKPEIIDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|288924926|ref|ZP_06418862.1| signal recognition particle protein [Prevotella buccae D17]
gi|288338116|gb|EFC76466.1| signal recognition particle protein [Prevotella buccae D17]
Length = 447
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++K+ ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMTEISNLKQAVSPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +Q
Sbjct: 260 SIRTVVTKPIKFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK V + + K +E++I++
Sbjct: 320 KKIQKNQFDFNDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP+ER PE+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 379 MTPKERSNPEILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|195978137|ref|YP_002123381.1| signal recognition particle protein Ffh [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225870534|ref|YP_002746481.1| signal recognition particle protein [Streptococcus equi subsp. equi
4047]
gi|195974842|gb|ACG62368.1| signal recognition particle protein Ffh [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225699938|emb|CAW93879.1| signal recognition particle protein [Streptococcus equi subsp. equi
4047]
Length = 523
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL++VK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMGELREVKALAKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
K+ FDFNDF++Q V MG M ++ MIPGM P A ++ +K + A++
Sbjct: 322 AKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAT-NPALANIKVDDKQIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE+PELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEEREQPELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|71910728|ref|YP_282278.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|410680584|ref|YP_006932986.1| signal recognition particle protein [Streptococcus pyogenes A20]
gi|71853510|gb|AAZ51533.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|409693173|gb|AFV38033.1| signal recognition particle protein [Streptococcus pyogenes A20]
Length = 520
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 160/237 (67%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV+E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF++Q V MG M ++ MIPGM G A ++ E + A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|418964864|ref|ZP_13516652.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383344265|gb|EID22434.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 524
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 162/240 (67%), Gaps = 12/240 (5%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+DVK + P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMNELRDVKVLAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEA 176
+K+ FDFNDF+ Q V MGSM ++ MIPGM PA +V E E + K A
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGSMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RA 378
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
++ +MTP ERE P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 379 IVSSMTPAERENPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|414343252|ref|YP_006984773.1| signal recognition particle protein [Gluconobacter oxydans H24]
gi|411028587|gb|AFW01842.1| signal recognition particle protein [Gluconobacter oxydans H24]
gi|453329471|dbj|GAC88315.1| signal recognition particle protein [Gluconobacter thailandicus
NBRC 3255]
Length = 471
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 162/232 (69%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDE++ ++ V P E LLVVDAMTGQ+A +FN +GITG +++++DGD+RGGAAL
Sbjct: 207 LMDEVRQIRAVTTPAETLLVVDAMTGQDAVNTAKSFNEAVGITGVVMSRMDGDARGGAAL 266
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++G PIKL G GE++E LE F+P+R+AGRILG+GDV VE+A E + E+ E +
Sbjct: 267 SMKAITGAPIKLTGSGEKLEALEEFHPERVAGRILGLGDVAGLVERAAETLDHEEGERVA 326
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSL-KIMEAMI 178
KK+++ FD +D++ Q + RMGS+S ++GM+PGMGKI +E + S+ K +A+I
Sbjct: 327 KKMLAGKFDLDDYVSQINQINRMGSISGILGMLPGMGKIKDMLGDKEIDTSIFKRHKAII 386
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +ER+ P ++ S R+KR+A SG T Q+V++L+ Q M MK +
Sbjct: 387 SSMTKQERKTPGIIKAS--RKKRIASGSGTTVQEVNRLLKQFDDMSTMMKRI 436
>gi|300172914|ref|YP_003772079.1| signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
gi|299887292|emb|CBL91260.1| Signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
Length = 489
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDV + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDVAEIAHPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 NSMTPAEREDPDLI--NPSRRRRLAAGAGRPIIEVNRMIKQFDQMRKMMN 428
>gi|339634031|ref|YP_004725672.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|420161374|ref|ZP_14668139.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|420161511|ref|ZP_14668275.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|338853827|gb|AEJ22993.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|394745049|gb|EJF33945.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|394745351|gb|EJF34235.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
Length = 491
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E+LLVVDAMTGQ A T FN +GITG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELADVKEIAQPDEILLVVDAMTGQNATETATGFNDRLGITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++ KPIK VG+GE+M DL+ FYP+RMA RILGMGD+++ +EKAQ+ + ++ A E
Sbjct: 262 SIRAITNKPIKFVGQGEKMTDLDVFYPERMASRILGMGDLMTLIEKAQKDVDEKKAAEQA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG + ++ MIPGM Q + + K + M+A++
Sbjct: 322 EKMRQNTFDFNDFIDQMDQVQNMGPLEDLMKMIPGMANNPALQNMQMDPKQIDHMKAIVL 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q QM+ M M
Sbjct: 382 SMTPAEREDPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMKGMMSKAMN 432
>gi|333398238|ref|ZP_08480051.1| signal recognition particle protein [Leuconostoc gelidum KCTC 3527]
Length = 488
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 160/247 (64%), Gaps = 12/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDV + P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDVAEIAQPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV 233
+MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+
Sbjct: 381 NSMTPAEREDPDLI--NPSRRRRLASGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGI 438
Query: 234 --MEGGS 238
M GGS
Sbjct: 439 DKMMGGS 445
>gi|156741648|ref|YP_001431777.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
gi|156232976|gb|ABU57759.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
Length = 444
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 167/242 (69%), Gaps = 7/242 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+ + + P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAAL
Sbjct: 200 LMVELEQINAAVEPVERLLVVDAMIGQEAVRVAEEFNRRVGLTGIIFTKIDGDARGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE 118
SV+ V+G PIK +G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +
Sbjct: 260 SVRAVTGVPIKFLGSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARK 319
Query: 119 MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMI 178
MQKK++ +FDF DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I
Sbjct: 320 MQKKLVKGSFDFEDFLASMQQMRKLGPLQQILGMIPGLDKLAREEI-ITEKDLKKIEAII 378
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EER P+L+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG
Sbjct: 379 FSMTKEERRNPDLIKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGI 434
Query: 239 LP 240
P
Sbjct: 435 DP 436
>gi|15615047|ref|NP_243350.1| signal recognition particle [Bacillus halodurans C-125]
gi|10175104|dbj|BAB06203.1| signal recognition particle [Bacillus halodurans C-125]
Length = 451
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 164/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK V P E+LLVVDAMTGQ+A + +F+ ++ ++G +LTKLDGD+RGGAAL
Sbjct: 202 LMDELQQVKEVAKPDEILLVVDAMTGQDAVNVAESFHEQLDVSGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A E++
Sbjct: 262 SVKAVTNTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVLTLIEKAQSTVDEEKARELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
KK+ + +F F+DFL+Q V MG + ++GM+PGM K + ++ EK + +EA++
Sbjct: 322 KKMRTMDFTFDDFLEQLDQVRSMGPLDELLGMMPGMNKAKGLKNLQVDEKQISRVEAIVR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT +E++ P ++ S RR+R+A+ SG Q V++L+ Q +M+ MK +
Sbjct: 382 SMTKQEKQDPSIINAS--RRRRIAKGSGTAIQDVNRLLKQFEEMKKMMKQM 430
>gi|325957087|ref|YP_004292499.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
gi|325333652|gb|ADZ07560.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
Length = 476
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V NP +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++A+++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAQKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLAN-NPQLKNLNVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EERE P++L +P RR+R+A SG+ +V++++ Q QMR +M + G+
Sbjct: 381 YSMTEEERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----EMMSKVTKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|347549198|ref|YP_004855526.1| putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982269|emb|CBW86263.1| Putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 450
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + +PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEIASPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M+
Sbjct: 262 SIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 322 QKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 382 SMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|404497721|ref|YP_006721827.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|418068002|ref|ZP_12705326.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
gi|78195323|gb|ABB33090.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|373557781|gb|EHP84167.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
Length = 452
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 159/232 (68%), Gaps = 4/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL +K + P E+L V DAMTGQEA + T FN + ITG +LTKLDGD++GGAAL
Sbjct: 201 LMNELVRIKEAVQPREILFVADAMTGQEAVNVATGFNERLDITGVVLTKLDGDAKGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKP+KLVG GE+++ LE FYPDR+ RILGMGD+L+ VEKAQ + E +Q
Sbjct: 261 SIRAVTGKPVKLVGLGEKLDALEVFYPDRLVSRILGMGDILTLVEKAQATFDATETERLQ 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ--VREAEKSLKIMEAMI 178
+K+ + FD DF Q + + +MGS+ ++GMIPG+GK + +EK LK +EA+I
Sbjct: 321 QKLKKSQFDLEDFRSQLQQIKKMGSLESILGMIPGVGKAMKQMQGAQPSEKELKRIEAII 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
++MTP ER +++ S RR R+A+ SG T Q+V+QL+ + + + MK L
Sbjct: 381 DSMTPGERANHQIINGS--RRLRIAKGSGTTVQEVNQLLKRFTEAQKVMKQL 430
>gi|255658401|ref|ZP_05403810.1| signal recognition particle protein [Mitsuokella multacida DSM
20544]
gi|260849734|gb|EEX69741.1| signal recognition particle protein [Mitsuokella multacida DSM
20544]
Length = 457
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 156/224 (69%), Gaps = 6/224 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL D+K ++P E+LLVVDAMTGQE+ + +FN +G+ G ++TKLDGD+RGGAAL
Sbjct: 201 LMKELCDIKSEVHPHEILLVVDAMTGQESVNVAQSFNDALGLDGVVMTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK +G GE++E LEPF+PDRMA RILGMGDVLS VEKAQ E+A+ M+
Sbjct: 261 SVKAVTGVPIKFIGLGEKLEPLEPFHPDRMASRILGMGDVLSLVEKAQATFDMEEAKMME 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEA 176
KK+ F +DFL Q + V ++GS+ ++G+IPGMG ++ + K ++ +EA
Sbjct: 321 KKLRKDEFTLDDFLAQMQQVKKLGSLDNILGLIPGMGGLKKQLAGQDIDLDGKEIRQIEA 380
Query: 177 MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+I++MTP+ER ++ S RRKR+A SG Q V++L+ Q
Sbjct: 381 IIKSMTPKERANINIINGS--RRKRIAMGSGTRVQDVNKLLKQF 422
>gi|357639717|ref|ZP_09137590.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|418416438|ref|ZP_12989637.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
gi|357588171|gb|EHJ57579.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|410874256|gb|EKS22187.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
Length = 517
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMAELHDVKSIAQPNEILLVVDSMIGQEAANVAREFNNQLDITGVVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSLELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIE 179
+K+ FDFNDF+ Q V MG M ++ MIPGM G + ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAGNPALSNIKVDEKQVARKRAIVS 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE PELL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 382 SMTPAERENPELL--TPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|53714504|ref|YP_100496.1| signal recognition protein [Bacteroides fragilis YCH46]
gi|60682525|ref|YP_212669.1| signal recognition particle protein [Bacteroides fragilis NCTC
9343]
gi|265766036|ref|ZP_06094077.1| signal recognition particle protein [Bacteroides sp. 2_1_16]
gi|336411085|ref|ZP_08591554.1| signal recognition particle protein [Bacteroides sp. 2_1_56FAA]
gi|375359320|ref|YP_005112092.1| signal recognition particle protein [Bacteroides fragilis 638R]
gi|383119251|ref|ZP_09939990.1| signal recognition particle protein [Bacteroides sp. 3_2_5]
gi|423250898|ref|ZP_17231913.1| signal recognition particle protein [Bacteroides fragilis
CL03T00C08]
gi|423254224|ref|ZP_17235154.1| signal recognition particle protein [Bacteroides fragilis
CL03T12C07]
gi|423261009|ref|ZP_17241911.1| signal recognition particle protein [Bacteroides fragilis
CL07T00C01]
gi|423267143|ref|ZP_17246125.1| signal recognition particle protein [Bacteroides fragilis
CL07T12C05]
gi|423270998|ref|ZP_17249969.1| signal recognition particle protein [Bacteroides fragilis
CL05T00C42]
gi|423274822|ref|ZP_17253768.1| signal recognition particle protein [Bacteroides fragilis
CL05T12C13]
gi|52217369|dbj|BAD49962.1| putative signal recognition protein [Bacteroides fragilis YCH46]
gi|60493959|emb|CAH08751.1| signal recognition particle protein [Bacteroides fragilis NCTC
9343]
gi|251946470|gb|EES86847.1| signal recognition particle protein [Bacteroides sp. 3_2_5]
gi|263253704|gb|EEZ25169.1| signal recognition particle protein [Bacteroides sp. 2_1_16]
gi|301164001|emb|CBW23557.1| signal recognition particle protein [Bacteroides fragilis 638R]
gi|335943349|gb|EGN05189.1| signal recognition particle protein [Bacteroides sp. 2_1_56FAA]
gi|387774770|gb|EIK36880.1| signal recognition particle protein [Bacteroides fragilis
CL07T00C01]
gi|392651855|gb|EIY45517.1| signal recognition particle protein [Bacteroides fragilis
CL03T00C08]
gi|392654782|gb|EIY48429.1| signal recognition particle protein [Bacteroides fragilis
CL03T12C07]
gi|392697846|gb|EIY91029.1| signal recognition particle protein [Bacteroides fragilis
CL07T12C05]
gi|392698922|gb|EIY92104.1| signal recognition particle protein [Bacteroides fragilis
CL05T00C42]
gi|392704101|gb|EIY97240.1| signal recognition particle protein [Bacteroides fragilis
CL05T12C13]
Length = 439
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 153/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER P +L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPEERSNPGILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|157150208|ref|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075002|gb|ABV09685.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 524
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 170/271 (62%), Gaps = 25/271 (9%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M +I M+PGM PA + EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME-- 235
+MTPEERE P+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKM 438
Query: 236 -----------------GGSLPALSNLEDAL 249
GG++P +S L+D +
Sbjct: 439 MKQMGLNPNNMPKNMPGGGAMPDMSALQDMM 469
>gi|88803314|ref|ZP_01118840.1| signal recognition particle protein [Polaribacter irgensii 23-P]
gi|88780880|gb|EAR12059.1| signal recognition particle protein [Polaribacter irgensii 23-P]
Length = 442
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ ++ + + P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMKEISEIHKTIQPQETLFVVDAMTGQDAVNTAKAFNDILNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ L+ F+PDRMA RILGMGDV+S VE+AQ+ +E+A ++Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDALDVFHPDRMADRILGMGDVISLVERAQDQYDEEEARKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL Q + + +MGSM ++GMIPG GK V + + K +EA+I +
Sbjct: 320 KKIAKNQFGFDDFLTQIQQIKKMGSMKDLMGMIPGAGKAMK-DVDIDDDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ER P + S R+KR+AQ SG + Q+++QL+ Q
Sbjct: 379 MTPSERSTPTSINAS--RKKRIAQGSGTSIQEINQLMKQF 416
>gi|384265181|ref|YP_005420888.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387898177|ref|YP_006328473.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452855544|ref|YP_007497227.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|380498534|emb|CCG49572.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387172287|gb|AFJ61748.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452079804|emb|CCP21562.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 446
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 170/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELSGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|418645795|ref|ZP_13207913.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|375022328|gb|EHS15811.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
Length = 447
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 172/243 (70%), Gaps = 3/243 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK+VK + P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAAL
Sbjct: 202 LMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++
Sbjct: 262 SIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
KK+ ++F +DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I+
Sbjct: 322 KKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ER P+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G +
Sbjct: 382 SMTPAERNNPDTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKV 439
Query: 240 PAL 242
A+
Sbjct: 440 NAI 442
>gi|419760758|ref|ZP_14287026.1| signal recognition particle protein Srp54 [Thermosipho africanus
H17ap60334]
gi|407514122|gb|EKF48973.1| signal recognition particle protein Srp54 [Thermosipho africanus
H17ap60334]
Length = 429
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 163/217 (75%), Gaps = 5/217 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+++K +LNP E+L+VVDAM GQ+A FN + +TG ++TK+DGD+RGG L
Sbjct: 197 MMNELEEIKDILNPDEILMVVDAMAGQDAVNSAKIFNERLDVTGYVVTKMDGDARGGVIL 256
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ ++ KPIK +G GE++EDLE F+P+R+A RILG+GDVLS +EKA++ + ++ +++
Sbjct: 257 SIRYITNKPIKFIGVGEKIEDLEEFHPERIASRILGLGDVLSLIEKAEQELDKDKMQKLG 316
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+++A F DF +Q + + ++GS+S+++ M+PG K+ + ++EK LK++EA+I +
Sbjct: 317 KKMLNAEFTLEDFQEQLKEIKKLGSLSKIVEMLPGSPKV---DINQSEKELKVIEAIINS 373
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLV 217
MTPEER P++L S R+KR+A+ SG + Q+V++L+
Sbjct: 374 MTPEERRNPKILNAS--RKKRIAKGSGTSVQEVNKLL 408
>gi|325287087|ref|YP_004262877.1| signal recognition particle protein [Cellulophaga lytica DSM 7489]
gi|324322541|gb|ADY30006.1| signal recognition particle protein [Cellulophaga lytica DSM 7489]
Length = 446
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 152/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +V + +NP E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+
Sbjct: 200 MMTEIANVHKAINPQETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAI 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ ++ F+P RMA RILGMGDV+S VE+AQE + +A ++Q
Sbjct: 260 SIKSVVTKPIKFIGTGEKMDAIDVFHPSRMAERILGMGDVVSLVERAQEQFDEAEARKIQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFLKQ + + +MGS+ ++GMIPG GK + + + K +EA+I +
Sbjct: 320 KKIAKNKFGFDDFLKQIQQIKKMGSLKDLMGMIPGAGKALKGMDID-DDAFKHVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTP ERE P LL S R++R+A+ SG++ Q+V+QL+ Q
Sbjct: 379 MTPVERETPNLLNAS--RKRRIAKGSGRSVQEVNQLLKQF 416
>gi|315303701|ref|ZP_07874216.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
gi|313627928|gb|EFR96546.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
Length = 450
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 165/231 (71%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK VK + PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKQVKEIATPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPIK + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M+
Sbjct: 262 SIRSVTGKPIKFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ + +DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I+
Sbjct: 322 QKMKDNSMTLDDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT E++ P+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 382 SMTKNEKDNPDIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|326204801|ref|ZP_08194655.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
gi|325985013|gb|EGD45855.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 2/222 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL ++K + P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAAL
Sbjct: 202 LMDELLNIKNSVKPHEILLVVDSMTGQDAVNVSETFNKKLGIDGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+GKPIK GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++
Sbjct: 262 SVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ + F DFL Q + + +MG + ++GM+PG+ + EK + EA+I++
Sbjct: 322 KKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQS 381
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 222
MT +ER P ++ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 382 MTRKERLDPSIINGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|154483576|ref|ZP_02026024.1| hypothetical protein EUBVEN_01280 [Eubacterium ventriosum ATCC
27560]
gi|149735486|gb|EDM51372.1| signal recognition particle protein [Eubacterium ventriosum ATCC
27560]
Length = 452
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL +++ + T+ +LVVDAMTGQ+A + FN +IGI G I+TKLDGD+RGGAAL
Sbjct: 204 MMNELVEIRDNIELTQTVLVVDAMTGQDAVNVAKEFNEKIGIDGIIVTKLDGDTRGGAAL 263
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K ++GKPI +G GE++ DLE F+PDRMA RILGMGDVLS +EKA++ + Q+ A+EM+
Sbjct: 264 SIKAITGKPILYIGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEQSIDQDKAKEME 323
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+++ A F F+D+L+ + MG +S ++ M+PG+G + EK L +EA+I +
Sbjct: 324 QRLKKAQFTFDDYLEYMGQIKNMGGLSSLLSMMPGVGGKINDDMLPDEKQLGKIEAIIYS 383
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
MT EER P+++ +P R++R+A+ +G QV++LV Q Q R MK++ G+M
Sbjct: 384 MTKEERSNPDVI--NPSRKQRIAKGAGVDISQVNKLVKQFEQARKMMKSMPGLM 435
>gi|423720622|ref|ZP_17694804.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|383365975|gb|EID43266.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 446
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 160/221 (72%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQMKEIAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTNTPIKFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A F +DFL+Q V ++G + ++ MIPG KI ++ EK + +EA+I
Sbjct: 322 QKMRTATFTLDDFLEQLGQVRKLGPLDEILKMIPGFHKIKGLNNLQIEEKQISRVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 382 SMTKEEKMHPEIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|375362242|ref|YP_005130281.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|421731732|ref|ZP_16170855.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451347031|ref|YP_007445662.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
gi|371568236|emb|CCF05086.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|407073945|gb|EKE46935.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449850789|gb|AGF27781.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
Length = 446
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 170/237 (71%), Gaps = 3/237 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL VK V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELSGVKEVANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ PIK G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E++
Sbjct: 262 SIRAVTETPIKFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I+
Sbjct: 322 QKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MT E+E+P+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 382 SMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|379722928|ref|YP_005315059.1| hypothetical protein PM3016_5192 [Paenibacillus mucilaginosus 3016]
gi|378571600|gb|AFC31910.1| Ffh [Paenibacillus mucilaginosus 3016]
Length = 470
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + + P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+
Sbjct: 202 LMEELKQIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAI 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM+
Sbjct: 262 SVKAVTGCPIKFAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F+DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A+++
Sbjct: 322 RKLRTAEFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT EER P+LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 382 SMTKEERANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|34540847|ref|NP_905326.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|334146894|ref|YP_004509823.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|419969944|ref|ZP_14485463.1| signal recognition particle protein [Porphyromonas gingivalis W50]
gi|34397161|gb|AAQ66225.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|333804050|dbj|BAK25257.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|392611883|gb|EIW94605.1| signal recognition particle protein [Porphyromonas gingivalis W50]
Length = 445
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 159/242 (65%), Gaps = 4/242 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E++ +K + P EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMREIEAIKAAIQPNEVLFVVDSMTGQDAVNTAKEFNTRLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE + +A +++
Sbjct: 260 SIRSVVNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVERAQEQYDEREARKLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
+KI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 EKIAKNQFDFNDFLAQIHQIKKMGNLKELASMIPGVGK-AIKDIDIDDDAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 240
MTP ER P +L + RRKR+A SG + Q V++L+ Q Q R MK + G +GG +P
Sbjct: 379 MTPHERTHPSIL--NGQRRKRIAMGSGTSIQDVNKLITQFDQTRKMMKTIQG-FKGGKMP 435
Query: 241 AL 242
+
Sbjct: 436 KM 437
>gi|313148460|ref|ZP_07810653.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137227|gb|EFR54587.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 439
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 153/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIAKNQFDFNDFLSQIGQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER P +L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 379 MTPEERSNPAILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|302392419|ref|YP_003828239.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
gi|302204496|gb|ADL13174.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
Length = 453
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+K +NP E+LLVVDAMTGQ+A + +F+ +G+ G LTKLDGD+RGGAAL
Sbjct: 201 LMGELKDIKAAVNPQEILLVVDAMTGQDAVNVAESFDDALGVDGITLTKLDGDARGGAAL 260
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+G+PIK VG GE+++DLEPF+PDRMA RILGMGD+LS +EKA+E + E A+E++
Sbjct: 261 SIRKVTGRPIKFVGTGEKLDDLEPFHPDRMASRILGMGDMLSLIEKAEENIDAEKAKELE 320
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ F +DFL Q + MG + +++ MIPGMGKI + E+ L +EA+I
Sbjct: 321 EKLRKEEFTLDDFLDQMSQIRNMGPLDQIMDMIPGMGKIKQLDNLDMGEEHLDQIEAIIS 380
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
+MT EE+ P ++ S RR+R+A SG Q V++L+ Q Q + MK L
Sbjct: 381 SMTTEEKRDPSIINGS--RRRRIANGSGTEVQDVNRLLKQFKQAQKMMKQL 429
>gi|337750082|ref|YP_004644244.1| hypothetical protein KNP414_05850 [Paenibacillus mucilaginosus
KNP414]
gi|386725707|ref|YP_006192033.1| hypothetical protein B2K_26860 [Paenibacillus mucilaginosus K02]
gi|336301271|gb|AEI44374.1| Ffh [Paenibacillus mucilaginosus KNP414]
gi|384092832|gb|AFH64268.1| Ffh [Paenibacillus mucilaginosus K02]
Length = 457
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 164/235 (69%), Gaps = 3/235 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+ELK + + P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+
Sbjct: 202 LMEELKQIVEAVTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAI 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+G PIK GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM+
Sbjct: 262 SVKAVTGCPIKFAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEME 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ +A F F+DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A+++
Sbjct: 322 RKLRTAEFTFDDFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT EER P+LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 382 SMTKEERANPDLL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|414597552|ref|ZP_11447116.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
gi|421877939|ref|ZP_16309469.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|421878934|ref|ZP_16310410.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|372556275|emb|CCF25589.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|390447237|emb|CCF26530.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|390481673|emb|CCF29177.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
Length = 491
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 162/247 (65%), Gaps = 12/247 (4%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKD+ + +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDIADIASPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK +G+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E +
Sbjct: 262 SIRDVTGKPIKFIGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V +MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRQNTFDFNDFVAQLKQVQKMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV 233
+MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+
Sbjct: 381 SSMTPAERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGL 438
Query: 234 --MEGGS 238
M GGS
Sbjct: 439 DKMMGGS 445
>gi|325297211|ref|YP_004257128.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
gi|324316764|gb|ADY34655.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
Length = 441
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E++ +K + P L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIETIKNAITPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPI VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +Q
Sbjct: 260 SIRTVVNKPILFVGTGEKLDAVDLFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDFL Q + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKIQKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
MTPEER +PE+L S RR R+A+ SG + Q+V++L+ Q Q R MK
Sbjct: 379 MTPEERTRPEILNGS--RRNRIAKGSGTSIQEVNRLLKQFDQTRKMMK 424
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 168/233 (72%), Gaps = 9/233 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK++K ++NP E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMDELKNIKELVNPQEILLVVDAMTGQDAVNVAQSFHDQLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++++ PIK +G GE+++ LE F+P+RMA RILGMGDV++ +E+AQE +E++ ++
Sbjct: 262 SIRKITNVPIKFIGLGEKLDTLEVFHPERMASRILGMGDVMTLIERAQENFDEEESMKLA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAM 177
K+M+A +DFNDFLKQ + + ++G+ ++ MIPG+G Q+++ K + +EA+
Sbjct: 322 DKMMNATYDFNDFLKQMKQMKKLGAFEDILKMIPGVGN----QLKDINIDPKQMARVEAI 377
Query: 178 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
I +MT +ER+ P+L+ S R++R+A+ G +V++++ Q MR MK
Sbjct: 378 IYSMTEQERKNPDLINAS--RKQRIAKGCGCDIAEVNRMIKQFTDMRKMMKKF 428
>gi|325661102|ref|ZP_08149729.1| signal recognition particle protein [Lachnospiraceae bacterium
4_1_37FAA]
gi|331085169|ref|ZP_08334255.1| signal recognition particle protein [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325472609|gb|EGC75820.1| signal recognition particle protein [Lachnospiraceae bacterium
4_1_37FAA]
gi|330407952|gb|EGG87442.1| signal recognition particle protein [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 449
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+EL+++K + + +LVVDAMTGQ+A + FN +IGI G I+TKLDGD+RGGAAL
Sbjct: 202 MMEELQEIKEHVEVHQTILVVDAMTGQDAVNVANDFNQKIGIDGVIVTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI VG GE++ DLE FYPDRMA RILGMGDVLS +EK E + ++ A EM
Sbjct: 262 SIRAVTGKPILYVGMGEKLSDLEQFYPDRMASRILGMGDVLSLIEKVGEDIDEDKAREMG 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMI 178
KKI A FDF D+L+ + +MG +S ++ M+PG M ++ E EK + MEA+I
Sbjct: 322 KKIKKAQFDFEDYLESMNQMKKMGGLSSILSMMPGMNMAQMKGFDSEEGEKKMAQMEAII 381
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 234
+MT +ER PE+L +P R+ R+A+ +G +V++++ Q Q + MK L +M
Sbjct: 382 YSMTVKERRNPEIL--NPSRKHRIAKGAGVDISEVNRMIKQFEQSKKMMKQLPNLM 435
>gi|320546729|ref|ZP_08041040.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
gi|320448608|gb|EFW89340.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
Length = 521
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 161/238 (67%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL+DVK + P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAAL
Sbjct: 202 LMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLDITGIVLTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++E++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+
Sbjct: 262 SIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF++Q V MG M ++ MIPGM PA + EK++ A++
Sbjct: 322 EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTPEERE P+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 381 SSMTPEERENPDLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|315038606|ref|YP_004032174.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|385817872|ref|YP_005854262.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
gi|312276739|gb|ADQ59379.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|327183810|gb|AEA32257.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
Length = 476
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 168/247 (68%), Gaps = 9/247 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL+ VK+V NP +LLVVDAMTGQ A + F+ + +TG ILTKLDGD+RGGAAL
Sbjct: 202 LMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+GKPI G+GE++ DL+ F+PDRMA RILGMGD+LS +EKAQ+ ++A+++
Sbjct: 262 SIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGDMLSLIEKAQQDYDAKEAQKVA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V +MG + +++ MIPG+ P + +K + EA++
Sbjct: 322 EKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLAN-NPQLKNLSVDQKQIDHTEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 238
+MT EERE P++L +P RR+R+A SG+ +V++++ Q QMR +M + G+
Sbjct: 381 YSMTEEERENPDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFKQMR----EMMSKVTKGN 434
Query: 239 LPALSNL 245
+ LSNL
Sbjct: 435 MKGLSNL 441
>gi|422884204|ref|ZP_16930653.1| signal recognition particle protein [Streptococcus sanguinis SK49]
gi|332360637|gb|EGJ38446.1| signal recognition particle protein [Streptococcus sanguinis SK49]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKTLANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|297584012|ref|YP_003699792.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
gi|297142469|gb|ADH99226.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
Length = 449
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 168/234 (71%), Gaps = 3/234 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDEL+ VK + P EVLLVVDAMTGQ+A + +FN ++ ++G +LTKLDGD+RGGAA+
Sbjct: 202 LMDELQQVKAEVKPDEVLLVVDAMTGQDAVNVAESFNEQLELSGVVLTKLDGDTRGGAAI 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SVK V+ PIK G GE+++ LEPF+P+RMA RILGMGDVLS +EKAQ + ++ A E++
Sbjct: 262 SVKAVTDTPIKFAGMGEKIDQLEPFHPERMASRILGMGDVLSLIEKAQTGVDEDKARELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIE 179
+K+ + + F+DFL+Q V MG + ++ M+PG GK+ + V+ +K L +EA+++
Sbjct: 322 RKMRTNDLSFDDFLEQLAQVKEMGPLDEILNMMPGAGKMKGLKNVQVDDKQLAHIEAIVK 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 233
+MT ERE P ++ S R+KR+A+ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 382 SMTKYERENPSVMNAS--RKKRIAKGSGRSIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|406673308|ref|ZP_11080531.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
gi|405586494|gb|EKB60254.1| signal recognition particle protein [Bergeyella zoohelcum CCUG
30536]
Length = 454
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+K V ++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL
Sbjct: 200 MMNEIKTVHHFIHPNETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
+++ V KPIK + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++
Sbjct: 260 TIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVISLVERAQEQFDEEEAKKLH 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F F+DFL+Q + + RMG+M ++GMIPG+GK V + + K +EA+I++
Sbjct: 320 KKIAKNEFGFDDFLQQIQQIKRMGNMKDLMGMIPGVGKAIK-DVDINDDAFKHIEAIIQS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
MTPEER KP ++ + R+ R+A+ +G+ + V+QL+ Q
Sbjct: 379 MTPEERRKPSII--NTQRKNRIAKGAGRKIEDVNQLMKQF 416
>gi|422826334|ref|ZP_16874513.1| signal recognition particle protein [Streptococcus sanguinis SK678]
gi|324994452|gb|EGC26365.1| signal recognition particle protein [Streptococcus sanguinis SK678]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|374384305|ref|ZP_09641831.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
gi|373228912|gb|EHP51215.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
Length = 441
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM E+ +K+ + P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMTEITAIKKAIEPNETLFVVDAMTGQDAVNTAKEFNERLDFDGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME ++ F+P+RMA RILGMGD++S VEKAQE E+A+++Q
Sbjct: 260 SIRTVVNKPIKFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVEKAQEQFDAEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KK+ F+FNDFL Q + + +MG++ + MIPG+GK V + + K +EA+I +
Sbjct: 320 KKLSKNQFNFNDFLGQIQQIKKMGNIKDLASMIPGVGK-ALKNVDIDDDAFKSVEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
MTP ERE P+++ S RRKR+A SG T Q V++L+ Q + + MK L G
Sbjct: 379 MTPMEREMPDIINGS--RRKRIALGSGTTVQDVNRLLKQFEESKKMMKMLSG 428
>gi|375008167|ref|YP_004981800.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287016|gb|AEV18700.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 446
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 159/221 (71%), Gaps = 3/221 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAAL
Sbjct: 202 LMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+G PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E++
Sbjct: 262 SIRAVTGAPIKFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIE 179
+K+ +A F +DFL Q V ++G + ++ M+PG KI + ++ EK + +EA+I
Sbjct: 322 QKMRTATFTLDDFLDQLGQVRKLGPLDEILKMLPGANKIKGLSNIQVDEKQIARVEAIIR 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 220
+MT EE+ PE++ S R++R+A+ SG T Q V++L+ Q
Sbjct: 382 SMTKEEKMHPEIINAS--RKRRIAKGSGTTVQDVNRLLKQF 420
>gi|422860148|ref|ZP_16906792.1| signal recognition particle protein [Streptococcus sanguinis SK330]
gi|327470046|gb|EGF15510.1| signal recognition particle protein [Streptococcus sanguinis SK330]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKSLANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422855528|ref|ZP_16902186.1| signal recognition particle protein [Streptococcus sanguinis SK1]
gi|327462217|gb|EGF08544.1| signal recognition particle protein [Streptococcus sanguinis SK1]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|291545208|emb|CBL18317.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
champanellensis 18P13]
Length = 460
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 161/233 (69%), Gaps = 5/233 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+MDELK +K + P E++LVVDAMTGQ+A + F+ +GI +++KLD D+RGGAAL
Sbjct: 200 LMDELKQIKAKVEPNEIMLVVDAMTGQDAVNVAKAFDEALGIDSVLMSKLDSDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV V+GKPIK VG GE++++ E F+P+RMA RILGMGDVL+ VEKA+ VM + DAE++
Sbjct: 260 SVLAVTGKPIKFVGMGEKLDEFERFHPERMASRILGMGDVLTLVEKAEAVMSKSDAEKLT 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIE 179
KK+ +FD ND L Q + + +MGS+ +I M+PG+G K+ V EK +EAMI
Sbjct: 320 KKLQEHSFDMNDLLDQLKQIRKMGSLKSIISMLPGVGDKVKDMDVD--EKQFSRIEAMIT 377
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 232
+MT +ER KP ++ +P R++R+A SG + V++L+ Q QM+ MK + G
Sbjct: 378 SMTKKERAKPSII--NPQRKRRIAAGSGTKVEDVNRLLKQFEQMQQFMKQMGG 428
>gi|70726678|ref|YP_253592.1| hypothetical protein SH1677 [Staphylococcus haemolyticus JCSC1435]
gi|68447402|dbj|BAE04986.1| ffh [Staphylococcus haemolyticus JCSC1435]
Length = 456
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 174/251 (69%), Gaps = 3/251 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+EL++VK + P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAAL
Sbjct: 202 LMNELQEVKEISKPNEIMLVVDAMTGQDAVNVAQSFDDQLDVTGVTLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V+ KPIK VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++
Sbjct: 262 SIRSVTQKPIKFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLE 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIE 179
+K+ ++ F +DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I+
Sbjct: 322 QKMRNSTFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGMDKLNMDEKQIDHIKAIIQ 381
Query: 180 AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
+MTP ERE P +L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G
Sbjct: 382 SMTPSERENPAVLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFSGAGRKGKK 439
Query: 240 PALSNLEDALK 250
S +E+ LK
Sbjct: 440 GKRSQMENMLK 450
>gi|323351581|ref|ZP_08087235.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
gi|322122067|gb|EFX93793.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422876404|ref|ZP_16922874.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
gi|332361212|gb|EGJ39016.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422882278|ref|ZP_16928734.1| signal recognition particle protein [Streptococcus sanguinis SK355]
gi|332360439|gb|EGJ38250.1| signal recognition particle protein [Streptococcus sanguinis SK355]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|325281983|ref|YP_004254525.1| signal recognition particle protein [Odoribacter splanchnicus DSM
20712]
gi|324313792|gb|ADY34345.1| signal recognition particle protein [Odoribacter splanchnicus DSM
20712]
Length = 441
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 159/239 (66%), Gaps = 6/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K ++P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAAL
Sbjct: 200 MMNEIAAIKEAIHPNETLFVVDAMTGQDAVNTAREFNERLDFNGVILTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE++E L+ F+P+RMA RILGMGD++S VEKAQE E+A+++Q
Sbjct: 260 SIRTVVNKPIKYVGTGEKLEALDAFHPERMADRILGMGDIVSLVEKAQEQFDAEEAKKLQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI F+FNDFL Q + + +MG++ + MIPG+GK + + + K +EA+I +
Sbjct: 320 KKISRNQFNFNDFLSQIQQIKKMGNIKDLASMIPGVGK-ALKDIDIDDDAFKGVEAIIYS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MT ERE P L+ S RRKR+A+ SG T Q V++L+ Q + + MK L G GG L
Sbjct: 379 MTAAEREDPALINGS--RRKRIAEGSGTTVQDVNRLLKQFEESKKMMKMLSG---GGKL 432
>gi|422846642|ref|ZP_16893325.1| signal recognition particle protein [Streptococcus sanguinis SK72]
gi|325687450|gb|EGD29471.1| signal recognition particle protein [Streptococcus sanguinis SK72]
Length = 524
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M EL DVK + NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAAL
Sbjct: 202 LMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
SV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM
Sbjct: 262 SVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMA 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q V MG M ++ +IPGM PA ++ EK + A++
Sbjct: 322 EKMRENTFDFNDFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 236
+MTP ERE P+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 381 SSMTPAERENPDLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|228469419|ref|ZP_04054433.1| signal recognition particle protein [Porphyromonas uenonis 60-3]
gi|228309103|gb|EEK17733.1| signal recognition particle protein [Porphyromonas uenonis 60-3]
Length = 446
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 158/239 (66%), Gaps = 7/239 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
MM+E+ +K + P E L VVD+MTGQ+A F+ + G ILTKLDGDSRGGAAL
Sbjct: 200 MMNEISSIKEAIRPDETLFVVDSMTGQDAVNTAAEFDKRLDFDGVILTKLDGDSRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S++ V KPIK VG GE+ME L+ F+P RMA RILGMGD++S VE+AQ+ +E+A+ ++
Sbjct: 260 SIRSVVNKPIKFVGTGEKMEALQVFHPSRMADRILGMGDIVSLVERAQQQYDEEEAKRLE 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KI FDFNDFL Q + +MG++ ++ MIPG+GK+ + + + K +EA+I +
Sbjct: 320 AKIAKNQFDFNDFLAQIAQIKKMGNLKDLVSMIPGVGKMVK-DLDISNDAFKGIEAIIHS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 239
MTPEER KP +L S RRKR+A SG + +V++L+ Q Q+ M+ M+GG L
Sbjct: 379 MTPEERAKPSILDGS--RRKRIADGSGTSVAEVNRLIQQFDQVSKVMRK----MQGGGL 431
>gi|296111749|ref|YP_003622131.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|339490980|ref|YP_004705485.1| signal recognition particle protein [Leuconostoc sp. C2]
gi|295833281|gb|ADG41162.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|338852652|gb|AEJ30862.1| signal recognition particle protein [Leuconostoc sp. C2]
Length = 491
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 153/230 (66%), Gaps = 5/230 (2%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M ELKDV + P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAAL
Sbjct: 202 LMQELKDVAEIAKPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAAL 261
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+++V+GKPIK VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E +
Sbjct: 262 SIRDVTGKPIKFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQL 321
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMI 178
+K+ FDFNDF+ Q + V MG M ++ MIPGM P A V K +EA++
Sbjct: 322 EKMRENTFDFNDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFAHLEAIV 380
Query: 179 EAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 228
+MTP ERE P+L+ +P RR+R+A +G+ +V++++ Q QMR M
Sbjct: 381 SSMTPAERENPDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMN 428
>gi|326798855|ref|YP_004316674.1| signal recognition particle protein [Sphingobacterium sp. 21]
gi|326549619|gb|ADZ78004.1| signal recognition particle protein [Sphingobacterium sp. 21]
Length = 446
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Query: 1 MMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAAL 60
+M+E+ VK NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAAL
Sbjct: 200 LMNEISAVKEATNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAAL 259
Query: 61 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ 120
S+K V KPIK +G GE+M+ L+ F+PDRMA RILGMGDV+S VE+AQ+ +++A +Q
Sbjct: 260 SIKSVVNKPIKFIGTGEKMDALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKEAAALQ 319
Query: 121 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEA 180
KKI FDFNDF+ Q + + +MG+M ++GMIPG+GK + + + K +EA+I +
Sbjct: 320 KKIRKNKFDFNDFISQIQQIKKMGNMKDLMGMIPGVGK-AIKDIDIDDDAFKPIEAIIGS 378
Query: 181 MTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 230
MTP ERE P+ + + RR R+A+ SG V++L+ Q MR MK
Sbjct: 379 MTPYERENPDAIDQK--RRMRIAKGSGTDINDVNKLMKQFSDMRKMMKQF 426
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,241,965,026
Number of Sequences: 23463169
Number of extensions: 169497016
Number of successful extensions: 676623
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9086
Number of HSP's successfully gapped in prelim test: 525
Number of HSP's that attempted gapping in prelim test: 657373
Number of HSP's gapped (non-prelim): 10884
length of query: 289
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 148
effective length of database: 9,050,888,538
effective search space: 1339531503624
effective search space used: 1339531503624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)