BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022955
MTDQSTLWGCMSSWLTLTPSTLFLFVNLVIGTIAVTSRFTSANRNPQQTLARAPSLLDRV
KSIDFSLYRFPTQPEQQKELHYFHQPTEEPPTYPVEPAPEQTHQLVRAPSLLDRVKSINF
SLYKFPSYPAQEPEPEPEPYSYANPVEPEPGRLDRAPSLLERVKSIRLPSVYRSQEAETE
VIGGNHEAETNTVHKPKRSKSESTNKAKTKSKENMKKSASEKAMAVEEEREMVERRRPQT
ARLERTVTVGDGDHGVDARADDFINKFKRQLRLQRLDSLLRYKEVLQGK

High Scoring Gene Products

Symbol, full name Information P value
AT4G26130 protein from Arabidopsis thaliana 6.2e-30
AT5G56980 protein from Arabidopsis thaliana 6.8e-24
AT2G26110 protein from Arabidopsis thaliana 1.9e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022955
        (289 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2120815 - symbol:AT4G26130 "AT4G26130" species...   331  6.2e-30   1
TAIR|locus:2164625 - symbol:AT5G56980 "AT5G56980" species...   274  6.8e-24   1
TAIR|locus:2057427 - symbol:AT2G26110 "AT2G26110" species...   251  1.9e-21   1


>TAIR|locus:2120815 [details] [associations]
            symbol:AT4G26130 "AT4G26130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0030003 "cellular cation
            homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
            transport" evidence=RCA] EMBL:CP002687 EMBL:AL161564 EMBL:AL049483
            InterPro:IPR025520 InterPro:IPR008480 Pfam:PF14364 Pfam:PF05553
            EMBL:AY074565 EMBL:AY143913 IPI:IPI00520023 PIR:T04268
            RefSeq:NP_194343.1 UniGene:At.25514 STRING:Q9SZI4 PRIDE:Q9SZI4
            EnsemblPlants:AT4G26130.1 GeneID:828719 KEGG:ath:AT4G26130
            TAIR:At4g26130 InParanoid:Q9SZI4 OMA:SERHIGR PhylomeDB:Q9SZI4
            ProtClustDB:CLSN2685905 ArrayExpress:Q9SZI4 Genevestigator:Q9SZI4
            Uniprot:Q9SZI4
        Length = 286

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 108/307 (35%), Positives = 146/307 (47%)

Query:    11 MSSWLTLTPSTLFLFVNLVIGTIAVTSRFTSANRNPQQ---------------TLARAPS 55
             +++WLT  P+TLFL +N  I TI +T+RF+S +R   Q                  R PS
Sbjct:     7 LTNWLT--PTTLFLLLNFTIATIFITNRFSSCSRKHNQHQDGYGSSGHDQNQARFGRPPS 64

Query:    56 LLDRVKSIDFSLYRFPTQPEQQKELHYFHQXXXXXXXXXXXXXXXQTHQLVRAPSLLDRV 115
             L+DRVKSI+F LY  P+ PE   E+HY                          PSLL RV
Sbjct:    65 LIDRVKSINFHLYNSPS-PES--EIHY----------------SGSDPNPNPPPSLLQRV 105

Query:   116 KSINFSLYKFPS------YPAQXXXXXXXXYSYANPVE--PEPGRLDR----APSLLERV 163
             KSIN   +KFP       Y A          +  +P++  PE          APSLL+RV
Sbjct:   106 KSINMPYFKFPQHNSEGDYAAYELMTQPDETNRVDPIDKIPEDDVTTEPRFGAPSLLQRV 165

Query:   164 KSIRLPSVYRSQEAETEVIGGNHEAETNTVHKPKRSKSESTNKAKTKSKENMKKSASEKX 223
             KSI+LPS+YRS    T       E +T+T  + K   S+   K K K+ + M KSASE+ 
Sbjct:   166 KSIKLPSLYRSDPDPTP------EVQTHT--RTKSESSKPATKKKKKATKKMMKSASERH 217

Query:   224 XXXXXXXXXXXXXX--PQTARLERTVTVGDG-DHGVDARADDFINKFKXXXXXXXXXXXX 280
                             P+T R+ERT ++GDG + GVD +A +FINKFK            
Sbjct:   218 IGREEEETVEAVEKRRPETMRVERTTSIGDGGEEGVDDKASNFINKFKQQLKLQRLDSFL 277

Query:   281 XYKEVLQ 287
              Y+E+L+
Sbjct:   278 RYREMLK 284


>TAIR|locus:2164625 [details] [associations]
            symbol:AT5G56980 "AT5G56980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 InterPro:IPR025520 InterPro:IPR008480
            Pfam:PF14364 Pfam:PF05553 IPI:IPI00521112 RefSeq:NP_568845.1
            UniGene:At.7095 PRIDE:F4K956 EnsemblPlants:AT5G56980.1
            GeneID:835800 KEGG:ath:AT5G56980 OMA:GRSRSEP Uniprot:F4K956
        Length = 379

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 90/248 (36%), Positives = 114/248 (45%)

Query:    50 LARAPSLLDRVKSIDFSLYRFPTQPEQQKELHYFHQXXXXXXXXXXXXXXXQTHQLVRAP 109
             L RAPSLLDRVKSI+ S ++F  Q    +E  Y H                +  +    P
Sbjct:   156 LQRAPSLLDRVKSINMSYFKF--QQYNPEENDYAHHT--------------EPTRFESIP 199

Query:   110 SLLDRVKSINFSLYKFPSYPAQXXXXXXXXYSYANPVEPEPGRLDRAPSLLERVKSIRLP 169
             + + RV  I+ S ++ P    +         S  NP    PG L RAPS+LERVKSI+L 
Sbjct:   200 TRMGRVDPIDISKFRIPE---EDQPTGTGVNSQINP----PG-LTRAPSILERVKSIKLS 251

Query:   170 SVYRSQEAETEVIGGNHEAETNTVHKPKRSKSESTNKAKTKSKE--NMKKSASEKXXXXX 227
             S YRS     +    N +   +  HK  RSKSES    K K K    M KSASEK     
Sbjct:   252 SFYRSDPDLDQK--QNPDPVLHEEHKHVRSKSESKKPVKKKKKALTKMTKSASEKSGFGF 309

Query:   228 XXXXXXXXXX--------PQTARLERTVTVGDGDHGVDARADDFINKFKXXXXXXXXXXX 279
                               P T R+ER+ + GDG+ GVDA+A DFINKFK           
Sbjct:   310 AGSHAEAPETVESLERRRPDTTRVERSTSFGDGEDGVDAKASDFINKFKQQLKLQRLDSI 369

Query:   280 XXYKEVLQ 287
               YKE+L+
Sbjct:   370 LRYKEMLK 377

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 79/186 (42%), Positives = 98/186 (52%)

Query:    18 TPSTLFLFVNLVIGTIAVTSRFTSANRNPQQ------------TLARAPSLLDRVKSIDF 65
             TP+TLFL +NL+IGTI VTSR  S +R   Q             LARAPS++DRVKSI+F
Sbjct:    12 TPTTLFLLLNLMIGTIVVTSRLGSGSRKHYQHHDGFGSGHAPAPLARAPSIIDRVKSINF 71

Query:    66 SLYRFPTQPEQQKELHYFHQXXXXXXXXXXXXXXXQTHQLVRAPSLLDRVKSINFSLYKF 125
              LY+FP  PE   EL                        L RAPSLLDRVKSIN S +KF
Sbjct:    72 HLYKFP-HPET--ELFSMTAHHDIIGSDLHVYPDPNPAPLQRAPSLLDRVKSINMSYFKF 128

Query:   126 PSYPAQXXXXXXXXYSYAN--PVEPEPGRLDRAPSLLERVKSIRLPSVYRSQEAETEVIG 183
             P +           +S+ +  P +P P  L RAPSLL+RVKSI + S ++ Q+   E   
Sbjct:   129 P-HDVTGSDPHSHSHSHLDLHP-DPAPAPLQRAPSLLDRVKSINM-SYFKFQQYNPEEND 185

Query:   184 GNHEAE 189
               H  E
Sbjct:   186 YAHHTE 191


>TAIR|locus:2057427 [details] [associations]
            symbol:AT2G26110 "AT2G26110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009737 "response to abscisic acid
            stimulus" evidence=IDA] GO:GO:0009737 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004747 InterPro:IPR025520
            InterPro:IPR008480 Pfam:PF14364 Pfam:PF05553 UniGene:At.22426
            EMBL:BT030007 IPI:IPI00516788 PIR:T02613 RefSeq:NP_180180.3
            UniGene:At.21501 PRIDE:O80986 EnsemblPlants:AT2G26110.1
            GeneID:817151 KEGG:ath:AT2G26110 TAIR:At2g26110 eggNOG:NOG247142
            HOGENOM:HOG000241914 InParanoid:O80986 OMA:VFLNLMI PhylomeDB:O80986
            ProtClustDB:CLSN2708474 ArrayExpress:O80986 Genevestigator:O80986
            Uniprot:O80986
        Length = 309

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 82/276 (29%), Positives = 124/276 (44%)

Query:    18 TPSTLFLFVNLVIGTIAVTSRFTSANRNPQQT-LARAPSLLDRVKSIDFSLYRFPTQPEQ 76
             TP+ LF+F+NL+IGTIA++S F+S + +P QT + R+PS++ R+KSI+FS +  P +   
Sbjct:    50 TPTVLFVFLNLMIGTIAISSSFSSKSNDPNQTQIQRSPSMIHRLKSINFSSFTSPDKSHL 109

Query:    77 QKELHYFHQXXXXXXXXXXXXXXXQTHQLVRAPSLLDRVKSINFSLYKFPSYPAQXXXXX 136
             +                       Q   L R+PS+L R+KS  F+LY + S         
Sbjct:   110 EFPPSTPEDNSNNNFHQPASIEQNQPF-LSRSPSVLHRIKS--FNLYNYISQEP------ 160

Query:   137 XXXYSYANPVEPEPGRLDRAPSLLERVKS--IRLPSVYRSQEAETEVIGGNH-EAETNTV 193
                    N +E  P      PS+    K   ++   V   QE E + +   + +   N V
Sbjct:   161 ------TNIIEASP------PSVTVETKQEQVQEQEVKEEQEEEEQSLEEVYSKLNLNHV 208

Query:   194 HKPKRSKSESTNKAKTKSKENMKKSASEKX--XXXXXXXXXXXXXXPQTARLERTVTVGD 251
              + K     +      K  + MKKSAS K                 P T ++ R  TV +
Sbjct:   209 ARTKSDTEPAAGIRPPKLPKKMKKSASTKSPFSHFQEDEISVEARRPATVKVPRVTTVEE 268

Query:   252 GDHGVDARADDFINKFKXXXXXXXXXXXXXYKEVLQ 287
              D  VDA+ADDFIN+FK             YKE+++
Sbjct:   269 ADEEVDAKADDFINRFKHQLKLQRIDSITKYKEMVK 304

 Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
 Identities = 46/182 (25%), Positives = 80/182 (43%)

Query:    47 QQTLARAPSLLDRVKSIDFSLYRFPTQPEQQKELHYFHQXXXXXXXXXXXXXXXQTHQLV 106
             Q+T  +  S+LD  +S+  ++Y + T       L+                      Q+ 
Sbjct:    25 QRTQPKQKSMLDMSESVLTAMYSWFTPTVLFVFLNLMIGTIAISSSFSSKSNDPNQTQIQ 84

Query:   107 RAPSLLDRVKSINFSLYKFP--SY----PAQXXXXXXXXYSYANPVEPEPGRLDRAPSLL 160
             R+PS++ R+KSINFS +  P  S+    P+         +     +E     L R+PS+L
Sbjct:    85 RSPSMIHRLKSINFSSFTSPDKSHLEFPPSTPEDNSNNNFHQPASIEQNQPFLSRSPSVL 144

Query:   161 ERVKSIRLPSVYRSQEAETEVIGGNHEAETNTVHKPKRSKSESTNKAKTKSKENMKKSAS 220
              R+KS  L + Y SQE  T +I    EA   +V     +K E   + + K ++  ++ + 
Sbjct:   145 HRIKSFNLYN-YISQEP-TNII----EASPPSV--TVETKQEQVQEQEVKEEQEEEEQSL 196

Query:   221 EK 222
             E+
Sbjct:   197 EE 198


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      289       238   0.00091  113 3  11 23  0.47    33
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  169 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.09u 0.12s 22.21t   Elapsed:  00:00:01
  Total cpu time:  22.09u 0.12s 22.21t   Elapsed:  00:00:01
  Start:  Sat May 11 04:06:55 2013   End:  Sat May 11 04:06:56 2013

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