Query 022956
Match_columns 289
No_of_seqs 120 out of 1496
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 07:23:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022956.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022956hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 2.1E-56 4.6E-61 368.0 24.3 254 21-282 83-343 (364)
2 KOG0575 Polo-like serine/threo 100.0 7.4E-56 1.6E-60 384.6 26.2 264 8-280 9-275 (592)
3 KOG0615 Serine/threonine prote 100.0 3.6E-57 7.9E-62 375.9 16.3 262 16-281 171-444 (475)
4 KOG0598 Ribosomal protein S6 k 100.0 5.1E-53 1.1E-57 347.9 21.2 256 20-283 28-290 (357)
5 KOG0592 3-phosphoinositide-dep 100.0 3.1E-52 6.8E-57 357.1 20.6 256 20-284 76-348 (604)
6 KOG0584 Serine/threonine prote 100.0 1.1E-52 2.4E-57 365.6 17.7 279 3-282 26-304 (632)
7 KOG0595 Serine/threonine-prote 100.0 2E-51 4.4E-56 341.7 24.2 264 11-281 5-275 (429)
8 KOG0593 Predicted protein kina 100.0 3.6E-52 7.8E-57 333.9 16.2 256 17-281 3-291 (396)
9 KOG0583 Serine/threonine prote 100.0 4.2E-50 9.1E-55 347.5 26.7 258 14-279 15-280 (370)
10 KOG0616 cAMP-dependent protein 100.0 7.4E-51 1.6E-55 325.4 19.9 254 20-284 47-307 (355)
11 KOG0591 NIMA (never in mitosis 100.0 2.7E-52 5.8E-57 331.6 11.4 246 19-268 21-275 (375)
12 KOG0198 MEKK and related serin 100.0 9.5E-51 2E-55 339.0 20.6 255 20-282 20-284 (313)
13 KOG0661 MAPK related serine/th 100.0 1.7E-51 3.6E-56 347.6 16.0 264 11-283 5-300 (538)
14 KOG0588 Serine/threonine prote 100.0 3.1E-50 6.8E-55 351.7 21.1 264 10-283 6-272 (786)
15 KOG0659 Cdk activating kinase 100.0 3.9E-49 8.4E-54 311.2 20.9 258 16-282 2-289 (318)
16 KOG0600 Cdc2-related protein k 100.0 3.4E-49 7.4E-54 335.8 21.0 254 21-280 121-406 (560)
17 KOG0660 Mitogen-activated prot 100.0 3.6E-49 7.8E-54 324.1 20.3 268 14-288 20-324 (359)
18 KOG0578 p21-activated serine/t 100.0 1.5E-49 3.3E-54 342.7 18.5 258 12-280 269-529 (550)
19 KOG0605 NDR and related serine 100.0 1.3E-48 2.8E-53 334.8 22.3 259 20-284 144-455 (550)
20 cd05571 STKc_PKB Catalytic dom 100.0 1.7E-48 3.7E-53 336.0 22.5 252 23-283 1-260 (323)
21 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-48 3.9E-53 331.2 22.3 253 20-283 4-263 (291)
22 KOG0033 Ca2+/calmodulin-depend 100.0 3.6E-50 7.7E-55 313.9 10.3 261 13-281 8-274 (355)
23 KOG0582 Ste20-like serine/thre 100.0 5.8E-48 1.3E-52 324.0 23.3 262 14-283 23-302 (516)
24 PTZ00263 protein kinase A cata 100.0 3.6E-48 7.8E-53 334.8 22.7 253 20-283 21-280 (329)
25 KOG0192 Tyrosine kinase specif 100.0 1.1E-47 2.4E-52 329.6 25.5 245 21-273 45-298 (362)
26 KOG0597 Serine-threonine prote 100.0 1.5E-48 3.1E-53 335.8 17.7 252 20-282 5-259 (808)
27 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-47 2.7E-52 332.1 23.7 257 17-282 2-265 (333)
28 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-47 5.3E-52 323.3 24.9 257 19-283 2-270 (285)
29 cd05599 STKc_NDR_like Catalyti 100.0 7.4E-48 1.6E-52 337.4 22.1 258 20-283 4-305 (364)
30 cd05628 STKc_NDR1 Catalytic do 100.0 2.7E-47 5.9E-52 333.6 25.0 259 20-284 4-303 (363)
31 cd05573 STKc_ROCK_NDR_like Cat 100.0 1E-47 2.2E-52 334.7 21.3 260 17-283 2-294 (350)
32 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-47 6.2E-52 328.3 23.7 252 23-283 1-260 (323)
33 cd05593 STKc_PKB_gamma Catalyt 100.0 3.5E-47 7.7E-52 328.4 23.7 252 23-283 1-260 (328)
34 PTZ00426 cAMP-dependent protei 100.0 4E-47 8.7E-52 329.3 23.9 254 19-283 32-293 (340)
35 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-46 2.5E-51 326.5 26.0 262 19-286 2-302 (338)
36 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-46 3.9E-51 324.7 26.9 262 17-284 35-303 (382)
37 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.8E-47 2.1E-51 322.3 24.7 260 15-284 4-298 (303)
38 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-47 1.6E-51 324.4 23.7 249 25-282 1-255 (312)
39 cd05629 STKc_NDR_like_fungal C 100.0 4.1E-47 8.8E-52 334.2 22.4 258 20-283 4-314 (377)
40 KOG0658 Glycogen synthase kina 100.0 1.6E-47 3.4E-52 314.9 18.4 254 19-283 26-315 (364)
41 cd05626 STKc_LATS2 Catalytic d 100.0 1.2E-46 2.6E-51 331.5 25.3 260 19-284 3-315 (381)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 5.9E-46 1.3E-50 321.3 29.0 256 16-282 5-309 (331)
43 KOG0599 Phosphorylase kinase g 100.0 7.2E-48 1.6E-52 305.4 15.4 259 16-280 17-289 (411)
44 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-46 3.1E-51 318.8 24.5 253 17-277 2-287 (287)
45 cd05588 STKc_aPKC Catalytic do 100.0 8.7E-47 1.9E-51 326.1 23.5 253 23-283 1-271 (329)
46 cd05590 STKc_nPKC_eta Catalyti 100.0 8.3E-47 1.8E-51 325.1 23.0 252 23-283 1-262 (320)
47 cd05625 STKc_LATS1 Catalytic d 100.0 1E-46 2.2E-51 332.2 23.6 259 20-284 4-315 (382)
48 KOG0694 Serine/threonine prote 100.0 4E-47 8.8E-52 333.9 20.7 255 20-284 371-634 (694)
49 KOG0201 Serine/threonine prote 100.0 1E-48 2.2E-53 328.0 9.6 259 11-280 8-269 (467)
50 cd05584 STKc_p70S6K Catalytic 100.0 1.5E-46 3.3E-51 323.9 23.5 252 23-282 2-264 (323)
51 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-46 2.8E-51 324.3 22.4 252 23-282 1-259 (323)
52 cd05598 STKc_LATS Catalytic do 100.0 7.5E-47 1.6E-51 332.4 21.3 258 20-283 4-310 (376)
53 KOG0663 Protein kinase PITSLRE 100.0 1.2E-46 2.5E-51 305.8 20.5 256 21-282 80-369 (419)
54 PTZ00036 glycogen synthase kin 100.0 3.2E-46 6.9E-51 333.8 25.4 257 15-283 65-360 (440)
55 cd07876 STKc_JNK2 Catalytic do 100.0 8.5E-46 1.8E-50 323.8 27.5 260 14-282 19-323 (359)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 8.7E-47 1.9E-51 325.7 21.0 252 23-283 1-261 (325)
57 KOG0610 Putative serine/threon 100.0 2.4E-46 5.1E-51 311.8 22.7 258 19-283 79-401 (459)
58 cd05601 STKc_CRIK Catalytic do 100.0 7.9E-47 1.7E-51 326.7 20.6 259 20-284 4-273 (330)
59 cd05614 STKc_MSK2_N N-terminal 100.0 2.9E-46 6.2E-51 323.4 23.8 257 19-282 2-275 (332)
60 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-46 5.4E-51 322.3 23.1 253 23-284 1-264 (321)
61 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-46 2.4E-51 329.4 21.0 258 20-283 4-302 (360)
62 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.3E-46 1.8E-50 314.4 25.7 252 16-277 5-288 (288)
63 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-46 2.3E-51 318.5 18.7 257 20-280 100-378 (576)
64 cd05570 STKc_PKC Catalytic dom 100.0 5.1E-46 1.1E-50 319.9 23.4 251 23-282 1-260 (318)
65 KOG0611 Predicted serine/threo 100.0 8.7E-47 1.9E-51 313.9 17.8 256 17-283 53-311 (668)
66 cd05596 STKc_ROCK Catalytic do 100.0 7.5E-46 1.6E-50 325.0 24.5 258 19-283 45-313 (370)
67 cd05587 STKc_cPKC Catalytic do 100.0 1.4E-45 3.1E-50 318.0 25.8 255 20-283 3-266 (324)
68 cd05592 STKc_nPKC_theta_delta 100.0 7.6E-46 1.6E-50 318.6 23.9 252 23-283 1-257 (316)
69 cd05618 STKc_aPKC_iota Catalyt 100.0 7.4E-46 1.6E-50 320.3 23.9 253 23-283 1-271 (329)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 2.9E-45 6.2E-50 317.1 27.5 257 16-282 5-307 (333)
71 cd05589 STKc_PKN Catalytic dom 100.0 9.4E-46 2E-50 319.1 24.4 255 19-283 1-266 (324)
72 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-45 4.7E-50 321.8 26.5 259 15-282 23-326 (364)
73 cd05605 STKc_GRK4_like Catalyt 100.0 1.5E-45 3.2E-50 312.4 24.4 257 19-283 2-270 (285)
74 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-46 5.1E-51 322.1 19.7 251 23-283 2-263 (318)
75 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-45 2.3E-50 317.7 23.6 252 23-283 1-257 (316)
76 cd07874 STKc_JNK3 Catalytic do 100.0 2.4E-45 5.2E-50 320.5 25.5 259 14-281 15-318 (355)
77 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-45 3.6E-50 311.3 23.7 252 25-284 1-267 (280)
78 cd05621 STKc_ROCK2 Catalytic d 100.0 2.3E-45 4.9E-50 321.7 24.8 257 19-282 45-312 (370)
79 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-45 4.6E-50 317.2 24.3 253 23-283 1-269 (327)
80 cd05616 STKc_cPKC_beta Catalyt 100.0 2.8E-45 6.1E-50 316.0 24.8 256 20-284 3-267 (323)
81 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-45 2.4E-50 318.3 22.3 252 23-283 1-260 (321)
82 cd05619 STKc_nPKC_theta Cataly 100.0 2.6E-45 5.7E-50 315.2 24.3 252 23-283 1-257 (316)
83 cd07862 STKc_CDK6 Catalytic do 100.0 3.8E-45 8.2E-50 310.5 25.0 254 17-277 2-290 (290)
84 cd05602 STKc_SGK1 Catalytic do 100.0 9.6E-46 2.1E-50 319.2 21.6 252 23-282 1-259 (325)
85 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-45 2.4E-50 318.8 21.5 251 23-282 1-259 (325)
86 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-44 4.1E-49 301.7 27.5 252 20-277 5-263 (263)
87 cd05607 STKc_GRK7 Catalytic do 100.0 6.3E-45 1.4E-49 307.3 24.7 253 25-284 1-264 (277)
88 PHA03212 serine/threonine kina 100.0 6.9E-45 1.5E-49 320.5 25.9 253 19-287 94-389 (391)
89 KOG4717 Serine/threonine prote 100.0 1.5E-45 3.3E-50 314.4 20.6 266 14-289 16-285 (864)
90 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-45 2.6E-50 317.4 20.1 252 15-281 204-462 (468)
91 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-45 7.3E-50 301.2 21.9 263 17-286 12-314 (323)
92 PF00069 Pkinase: Protein kina 100.0 8.7E-46 1.9E-50 309.2 18.6 252 19-277 1-260 (260)
93 cd06644 STKc_STK10_LOK Catalyt 100.0 3.5E-44 7.5E-49 305.0 28.6 263 12-284 8-279 (292)
94 cd05597 STKc_DMPK_like Catalyt 100.0 7.1E-45 1.5E-49 314.5 24.1 258 20-283 4-275 (331)
95 PTZ00283 serine/threonine prot 100.0 1.8E-44 4E-49 326.3 27.8 260 13-280 29-303 (496)
96 PLN00034 mitogen-activated pro 100.0 1.4E-44 3E-49 315.4 25.9 251 20-283 77-337 (353)
97 PTZ00266 NIMA-related protein 100.0 1.9E-44 4.2E-49 337.9 28.1 265 14-283 11-304 (1021)
98 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-44 2.3E-49 317.7 24.3 259 17-282 43-312 (371)
99 cd06611 STKc_SLK_like Catalyti 100.0 2.5E-44 5.5E-49 303.9 25.3 261 13-283 2-271 (280)
100 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-44 4.2E-49 305.8 24.6 252 20-277 3-288 (288)
101 KOG0589 Serine/threonine prote 100.0 1.9E-45 4.1E-50 315.0 18.4 256 16-280 4-264 (426)
102 cd05586 STKc_Sck1_like Catalyt 100.0 2.4E-45 5.2E-50 317.4 19.2 250 25-282 1-261 (330)
103 cd05572 STKc_cGK_PKG Catalytic 100.0 4E-44 8.7E-49 299.8 25.8 253 25-283 1-261 (262)
104 cd05630 STKc_GRK6 Catalytic do 100.0 1.6E-44 3.5E-49 306.0 23.7 256 20-283 3-270 (285)
105 cd06651 STKc_MEKK3 Catalytic d 100.0 6.1E-44 1.3E-48 299.5 26.9 254 20-278 5-265 (266)
106 cd05615 STKc_cPKC_alpha Cataly 100.0 3.1E-44 6.7E-49 309.5 24.7 254 20-282 3-265 (323)
107 PTZ00267 NIMA-related protein 100.0 7.1E-44 1.5E-48 322.0 27.9 251 19-280 69-329 (478)
108 cd06654 STKc_PAK1 Catalytic do 100.0 8.6E-44 1.9E-48 303.2 26.9 262 10-282 14-278 (296)
109 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.4E-44 1.2E-48 306.2 25.8 257 16-282 6-294 (309)
110 cd08223 STKc_Nek4 Catalytic do 100.0 1.9E-43 4E-48 294.8 28.2 251 19-277 2-257 (257)
111 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-44 6.1E-49 315.6 24.5 256 20-281 3-295 (372)
112 cd05623 STKc_MRCK_alpha Cataly 100.0 2.4E-44 5.1E-49 311.4 23.6 258 20-283 4-275 (332)
113 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-43 2.8E-48 303.8 27.8 255 19-283 3-296 (308)
114 KOG0580 Serine/threonine prote 100.0 1.5E-45 3.2E-50 286.9 14.2 264 6-280 12-279 (281)
115 cd06652 STKc_MEKK2 Catalytic d 100.0 1.8E-43 3.9E-48 296.4 27.6 256 19-278 4-265 (265)
116 cd05580 STKc_PKA Catalytic dom 100.0 8.3E-44 1.8E-48 302.4 25.9 254 19-283 3-263 (290)
117 KOG2345 Serine/threonine prote 100.0 1E-45 2.2E-50 289.1 12.8 255 14-274 18-296 (302)
118 cd06609 STKc_MST3_like Catalyt 100.0 1E-43 2.2E-48 299.4 26.1 256 17-283 2-260 (274)
119 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3E-44 6.5E-49 312.1 23.5 261 14-284 13-308 (343)
120 cd06656 STKc_PAK3 Catalytic do 100.0 4.2E-44 9E-49 305.2 23.9 263 10-283 13-278 (297)
121 cd08227 PK_STRAD_alpha Pseudok 100.0 5.1E-44 1.1E-48 308.8 24.7 259 21-286 2-319 (327)
122 PTZ00284 protein kinase; Provi 100.0 8.7E-44 1.9E-48 321.0 26.9 254 16-282 129-446 (467)
123 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-43 3.3E-48 299.5 26.6 254 19-281 7-269 (282)
124 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-43 3.4E-48 296.7 26.4 253 19-277 2-265 (265)
125 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-43 2.6E-48 295.7 25.4 252 14-277 1-256 (256)
126 cd06655 STKc_PAK2 Catalytic do 100.0 1.6E-43 3.4E-48 301.6 26.6 257 14-281 17-276 (296)
127 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-43 5.1E-48 293.9 27.1 249 20-277 3-256 (256)
128 cd05632 STKc_GRK5 Catalytic do 100.0 9.7E-44 2.1E-48 301.3 25.1 258 20-283 3-270 (285)
129 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.4E-44 1.6E-48 309.1 24.5 249 16-273 7-329 (338)
130 cd08220 STKc_Nek8 Catalytic do 100.0 2.3E-43 5E-48 294.0 26.4 250 20-277 3-256 (256)
131 cd08217 STKc_Nek2 Catalytic do 100.0 3E-43 6.4E-48 294.4 27.2 251 20-277 3-265 (265)
132 cd06619 PKc_MKK5 Catalytic dom 100.0 2.5E-43 5.4E-48 297.8 27.0 254 19-285 3-264 (279)
133 cd07850 STKc_JNK Catalytic dom 100.0 1E-43 2.2E-48 310.0 25.3 266 14-288 14-325 (353)
134 cd05624 STKc_MRCK_beta Catalyt 100.0 4.4E-44 9.5E-49 309.5 22.8 258 20-283 4-275 (331)
135 cd05574 STKc_phototropin_like 100.0 1.5E-43 3.2E-48 304.4 25.9 259 19-284 3-299 (316)
136 cd06645 STKc_MAP4K3 Catalytic 100.0 1.5E-43 3.3E-48 297.1 25.0 252 15-276 8-267 (267)
137 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.8E-43 6.2E-48 295.4 26.4 251 20-277 3-267 (267)
138 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-43 3.3E-48 297.8 24.7 255 13-277 3-272 (272)
139 cd06605 PKc_MAPKK Catalytic do 100.0 6.2E-44 1.3E-48 299.0 22.2 252 20-280 4-263 (265)
140 cd06646 STKc_MAP4K5 Catalytic 100.0 1.3E-43 2.8E-48 297.5 24.0 256 11-276 4-267 (267)
141 cd06608 STKc_myosinIII_like Ca 100.0 2.6E-43 5.6E-48 296.5 25.4 256 13-277 3-275 (275)
142 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-43 4.9E-48 303.4 25.4 247 22-277 6-317 (317)
143 cd07839 STKc_CDK5 Catalytic do 100.0 7E-44 1.5E-48 301.8 21.7 250 20-277 3-284 (284)
144 cd08221 STKc_Nek9 Catalytic do 100.0 1.1E-42 2.3E-47 290.2 28.1 249 20-277 3-256 (256)
145 cd05577 STKc_GRK Catalytic dom 100.0 1.9E-43 4.1E-48 298.3 23.7 252 25-284 1-264 (277)
146 cd07845 STKc_CDK10 Catalytic d 100.0 3.5E-43 7.5E-48 301.2 25.7 265 14-285 5-301 (309)
147 cd05609 STKc_MAST Catalytic do 100.0 5.3E-43 1.2E-47 299.5 26.8 259 20-284 4-283 (305)
148 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-43 2.6E-48 296.2 22.1 251 19-277 2-258 (258)
149 cd07861 STKc_CDK1_euk Catalyti 100.0 3.6E-43 7.7E-48 297.5 25.2 250 20-277 3-285 (285)
150 cd06606 STKc_MAPKKK Catalytic 100.0 7.9E-43 1.7E-47 290.6 26.9 253 20-277 3-260 (260)
151 cd06630 STKc_MEKK1 Catalytic d 100.0 4.3E-43 9.3E-48 294.4 25.3 255 20-278 3-268 (268)
152 cd06623 PKc_MAPKK_plant_like C 100.0 6.1E-43 1.3E-47 292.6 26.1 254 20-281 4-263 (264)
153 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.1E-43 1.1E-47 296.6 25.7 253 17-277 2-286 (286)
154 cd05611 STKc_Rim15_like Cataly 100.0 4.1E-43 8.9E-48 293.4 24.7 252 23-283 2-260 (260)
155 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.1E-43 8.9E-48 299.7 24.9 257 16-282 6-294 (301)
156 cd06639 STKc_myosinIIIB Cataly 100.0 1.3E-42 2.7E-47 295.2 27.6 257 13-278 19-291 (291)
157 cd06613 STKc_MAP4K3_like Catal 100.0 8.6E-43 1.9E-47 291.5 26.1 252 15-276 2-262 (262)
158 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.6E-43 1.2E-47 296.0 25.2 257 11-277 11-282 (282)
159 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-42 2.9E-47 290.7 27.2 251 20-277 3-264 (264)
160 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.6E-43 1.2E-47 296.0 25.1 255 20-283 4-270 (283)
161 cd08218 STKc_Nek1 Catalytic do 100.0 1E-42 2.2E-47 290.3 26.2 249 20-277 3-256 (256)
162 KOG1989 ARK protein kinase fam 100.0 8E-44 1.7E-48 321.5 20.7 257 8-274 28-307 (738)
163 PHA02988 hypothetical protein; 100.0 8.2E-43 1.8E-47 295.2 25.7 242 23-273 26-274 (283)
164 cd07832 STKc_CCRK Catalytic do 100.0 9.6E-43 2.1E-47 294.9 26.2 251 20-278 3-286 (286)
165 cd05633 STKc_GRK3 Catalytic do 100.0 6.6E-43 1.4E-47 295.3 24.8 252 24-284 1-265 (279)
166 cd07841 STKc_CDK7 Catalytic do 100.0 8.9E-43 1.9E-47 297.1 25.7 260 20-285 3-293 (298)
167 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1E-42 2.2E-47 291.8 25.6 251 19-277 3-267 (267)
168 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-42 3.3E-47 289.2 26.3 252 20-277 3-258 (258)
169 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-42 2.4E-47 294.7 25.4 256 13-277 15-286 (286)
170 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.5E-42 5.4E-47 292.9 27.4 256 20-282 4-274 (287)
171 PHA03209 serine/threonine kina 100.0 4E-43 8.8E-48 306.4 22.9 246 19-280 68-357 (357)
172 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.6E-42 7.9E-47 288.4 27.4 254 20-277 5-264 (264)
173 KOG0667 Dual-specificity tyros 100.0 5.6E-43 1.2E-47 307.2 23.3 254 17-283 187-511 (586)
174 cd06917 STKc_NAK1_like Catalyt 100.0 1.7E-42 3.8E-47 292.2 25.0 255 19-283 3-264 (277)
175 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-42 4.8E-47 294.0 25.6 254 17-277 6-293 (293)
176 cd07867 STKc_CDC2L6 Catalytic 100.0 6.5E-43 1.4E-47 300.5 22.4 247 22-277 6-317 (317)
177 cd05606 STKc_beta_ARK Catalyti 100.0 2.5E-42 5.4E-47 291.6 25.6 253 24-284 1-265 (278)
178 cd06640 STKc_MST4 Catalytic do 100.0 1.9E-42 4.1E-47 292.2 24.7 257 15-283 3-262 (277)
179 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-42 4.3E-47 293.2 24.9 255 19-283 3-271 (286)
180 cd06624 STKc_ASK Catalytic dom 100.0 4.7E-42 1E-46 288.3 26.8 248 22-277 13-268 (268)
181 cd05579 STKc_MAST_like Catalyt 100.0 1.2E-42 2.6E-47 290.7 23.1 251 25-282 1-265 (265)
182 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.3E-42 7.2E-47 289.8 25.8 253 20-277 4-272 (272)
183 cd06647 STKc_PAK_I Catalytic d 100.0 1.6E-42 3.5E-47 294.9 23.8 262 9-281 12-276 (293)
184 PHA03207 serine/threonine kina 100.0 2E-42 4.3E-47 305.7 24.9 256 19-289 94-390 (392)
185 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.7E-42 3.6E-47 300.5 24.0 267 15-288 4-305 (337)
186 cd07833 STKc_CDKL Catalytic do 100.0 2.7E-42 5.9E-47 292.4 24.7 253 17-277 2-288 (288)
187 cd07860 STKc_CDK2_3 Catalytic 100.0 1.8E-42 3.9E-47 293.2 23.5 250 20-277 3-284 (284)
188 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.9E-42 1.1E-46 290.6 25.7 255 19-282 7-274 (284)
189 cd06614 STKc_PAK Catalytic dom 100.0 5.9E-42 1.3E-46 290.4 26.1 263 11-284 14-280 (286)
190 cd06616 PKc_MKK4 Catalytic dom 100.0 2.4E-42 5.2E-47 293.0 23.7 255 20-283 7-276 (288)
191 cd06659 STKc_PAK6 Catalytic do 100.0 2.2E-42 4.7E-47 294.7 23.5 257 18-284 22-281 (297)
192 cd06658 STKc_PAK5 Catalytic do 100.0 1.5E-42 3.3E-47 294.9 22.4 254 21-284 26-282 (292)
193 PTZ00024 cyclin-dependent prot 100.0 5.6E-42 1.2E-46 297.0 26.1 264 13-282 5-321 (335)
194 cd07834 STKc_MAPK Catalytic do 100.0 1.9E-42 4.2E-47 299.2 22.7 264 19-288 2-303 (330)
195 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-41 2.7E-46 288.4 27.1 250 22-282 24-277 (285)
196 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.2E-42 9.2E-47 298.5 24.6 265 13-286 2-312 (342)
197 PHA03211 serine/threonine kina 100.0 3.5E-42 7.6E-47 307.3 24.6 248 15-279 168-460 (461)
198 KOG4721 Serine/threonine prote 100.0 7.3E-44 1.6E-48 307.1 13.2 236 23-277 130-367 (904)
199 cd07831 STKc_MOK Catalytic dom 100.0 6.2E-42 1.3E-46 289.4 24.8 251 19-277 1-282 (282)
200 cd05122 PKc_STE Catalytic doma 100.0 1.6E-41 3.5E-46 281.6 26.8 249 19-276 2-253 (253)
201 cd08215 STKc_Nek Catalytic dom 100.0 1E-41 2.2E-46 283.9 25.6 249 20-277 3-258 (258)
202 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.4E-43 2E-47 293.9 19.6 255 16-282 4-261 (277)
203 cd06607 STKc_TAO Catalytic dom 100.0 2E-41 4.4E-46 290.0 28.1 261 9-281 8-274 (307)
204 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-41 3.3E-46 288.6 26.9 253 15-277 4-291 (291)
205 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-41 2.4E-46 285.7 25.7 256 16-280 2-265 (267)
206 cd07849 STKc_ERK1_2_like Catal 100.0 6.3E-42 1.4E-46 296.8 24.7 264 14-286 3-304 (336)
207 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-42 5.1E-47 299.2 21.8 266 15-287 4-307 (334)
208 KOG0579 Ste20-like serine/thre 100.0 9.3E-44 2E-48 309.9 13.0 263 11-283 27-298 (1187)
209 cd05106 PTKc_CSF-1R Catalytic 100.0 8.9E-42 1.9E-46 299.5 25.6 246 19-273 40-367 (374)
210 KOG0983 Mitogen-activated prot 100.0 2E-42 4.3E-47 274.5 19.3 252 22-282 97-357 (391)
211 KOG0574 STE20-like serine/thre 100.0 3.4E-45 7.4E-50 294.0 3.6 251 20-282 36-291 (502)
212 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-41 6E-46 280.9 27.2 249 20-277 3-254 (254)
213 PLN00009 cyclin-dependent kina 100.0 8.7E-42 1.9E-46 290.5 24.6 259 17-283 3-293 (294)
214 cd07835 STKc_CDK1_like Catalyt 100.0 7.3E-42 1.6E-46 289.3 24.0 250 20-277 2-283 (283)
215 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-41 2.6E-46 285.6 25.0 247 17-273 5-260 (266)
216 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-41 2.6E-46 298.9 26.1 246 19-273 37-369 (375)
217 KOG0586 Serine/threonine prote 100.0 8.9E-43 1.9E-47 303.3 18.4 259 15-283 54-315 (596)
218 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-41 2.4E-46 284.0 24.0 250 20-277 3-257 (257)
219 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-41 4.1E-46 289.8 25.9 249 16-273 5-300 (304)
220 cd07852 STKc_MAPK15 Catalytic 100.0 9.3E-42 2E-46 295.8 24.3 266 14-287 5-308 (337)
221 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-41 5.1E-46 285.4 26.1 251 20-281 7-260 (277)
222 KOG0690 Serine/threonine prote 100.0 1.6E-43 3.6E-48 287.0 12.1 256 20-284 171-434 (516)
223 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-41 5.8E-46 281.6 25.5 245 20-274 3-252 (255)
224 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.2E-42 1.6E-46 289.7 22.2 251 20-277 4-286 (286)
225 PHA03390 pk1 serine/threonine- 100.0 2.8E-41 6.1E-46 283.6 25.5 243 21-279 18-267 (267)
226 cd07865 STKc_CDK9 Catalytic do 100.0 1.8E-41 3.9E-46 290.4 24.7 258 13-277 9-310 (310)
227 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-41 3.6E-46 288.8 23.9 256 17-278 2-295 (295)
228 cd08530 STKc_CNK2-like Catalyt 100.0 2.7E-41 5.8E-46 281.4 24.6 248 20-277 3-256 (256)
229 PF07714 Pkinase_Tyr: Protein 100.0 5.8E-42 1.3E-46 286.5 20.5 243 21-273 3-257 (259)
230 KOG0577 Serine/threonine prote 100.0 4E-43 8.6E-48 303.7 13.8 261 8-280 18-284 (948)
231 cd07844 STKc_PCTAIRE_like Cata 100.0 4.3E-41 9.3E-46 285.7 26.1 252 16-277 5-291 (291)
232 cd05048 PTKc_Ror Catalytic Dom 100.0 3.4E-41 7.3E-46 285.2 25.0 244 20-273 8-278 (283)
233 KOG0193 Serine/threonine prote 100.0 7.3E-43 1.6E-47 303.0 15.0 242 20-273 395-648 (678)
234 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.6E-41 7.8E-46 285.1 25.1 255 15-279 2-280 (283)
235 cd07836 STKc_Pho85 Catalytic d 100.0 4.1E-41 9E-46 284.7 25.2 249 20-277 3-284 (284)
236 cd05061 PTKc_InsR Catalytic do 100.0 7E-41 1.5E-45 284.2 26.6 256 16-282 6-288 (288)
237 cd05581 STKc_PDK1 Catalytic do 100.0 1.6E-41 3.4E-46 286.5 22.5 249 20-277 4-280 (280)
238 cd07840 STKc_CDK9_like Catalyt 100.0 4.3E-41 9.2E-46 284.8 25.1 252 20-277 2-287 (287)
239 KOG0596 Dual specificity; seri 100.0 3.8E-42 8.3E-47 295.5 18.7 259 12-280 356-633 (677)
240 cd05054 PTKc_VEGFR Catalytic d 100.0 2.2E-41 4.9E-46 293.2 23.8 251 15-274 6-329 (337)
241 cd05613 STKc_MSK1_N N-terminal 100.0 4.2E-41 9E-46 285.7 24.9 258 19-283 2-277 (290)
242 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.1E-41 1.3E-45 291.3 26.1 263 14-286 13-310 (343)
243 cd05116 PTKc_Syk Catalytic dom 100.0 8.1E-41 1.8E-45 279.1 25.9 240 24-273 2-250 (257)
244 cd07851 STKc_p38 Catalytic dom 100.0 1.9E-41 4.1E-46 294.5 22.6 263 14-286 13-310 (343)
245 cd06657 STKc_PAK4 Catalytic do 100.0 5.3E-41 1.2E-45 285.4 24.8 251 22-283 25-279 (292)
246 cd05084 PTKc_Fes Catalytic dom 100.0 7.8E-41 1.7E-45 278.3 25.1 241 23-273 1-248 (252)
247 KOG4279 Serine/threonine prote 100.0 9.6E-43 2.1E-47 306.1 14.2 249 24-280 582-838 (1226)
248 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.5E-41 1.2E-45 291.8 25.1 265 14-288 15-314 (345)
249 cd00192 PTKc Catalytic domain 100.0 7.7E-41 1.7E-45 279.2 24.5 242 23-274 1-260 (262)
250 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.8E-40 3.9E-45 278.2 26.7 251 16-273 2-260 (267)
251 cd07879 STKc_p38delta_MAPK13 C 100.0 5.3E-41 1.1E-45 291.6 24.1 263 14-287 13-310 (342)
252 cd05123 STKc_AGC Catalytic dom 100.0 7.4E-41 1.6E-45 277.9 23.6 244 25-277 1-250 (250)
253 KOG0604 MAP kinase-activated p 100.0 2.3E-42 5E-47 277.1 13.9 251 23-284 68-332 (400)
254 KOG0607 MAP kinase-interacting 100.0 2.4E-42 5.1E-47 279.4 14.0 258 23-288 84-375 (463)
255 cd05583 STKc_MSK_N N-terminal 100.0 6E-41 1.3E-45 284.5 23.4 257 20-283 3-275 (288)
256 cd08229 STKc_Nek7 Catalytic do 100.0 8E-41 1.7E-45 280.5 23.7 248 20-273 5-260 (267)
257 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-40 3.2E-45 281.6 25.5 252 20-277 2-287 (287)
258 cd08226 PK_STRAD_beta Pseudoki 100.0 4.1E-41 8.9E-46 290.7 22.5 254 22-282 3-316 (328)
259 cd06618 PKc_MKK7 Catalytic dom 100.0 9.5E-41 2.1E-45 284.4 24.1 256 20-284 18-283 (296)
260 cd07842 STKc_CDK8_like Catalyt 100.0 6.1E-41 1.3E-45 287.9 23.1 253 20-277 3-316 (316)
261 PRK13184 pknD serine/threonine 100.0 8.9E-41 1.9E-45 312.0 25.7 252 16-274 2-285 (932)
262 cd06633 STKc_TAO3 Catalytic do 100.0 4.4E-40 9.6E-45 282.5 28.1 258 12-281 17-280 (313)
263 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-40 2.8E-45 282.5 24.4 252 19-283 7-282 (288)
264 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-40 3.2E-45 281.6 24.7 252 15-273 2-278 (284)
265 cd07864 STKc_CDK12 Catalytic d 100.0 1.2E-40 2.5E-45 284.5 24.2 253 19-277 9-302 (302)
266 cd07866 STKc_BUR1 Catalytic do 100.0 7.4E-41 1.6E-45 286.7 22.9 256 15-277 7-311 (311)
267 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.4E-40 5.1E-45 285.9 26.1 264 13-287 7-301 (328)
268 cd07857 STKc_MPK1 Catalytic do 100.0 2.1E-40 4.5E-45 286.8 25.7 263 19-287 2-305 (332)
269 cd05052 PTKc_Abl Catalytic dom 100.0 2.7E-40 5.8E-45 276.9 25.4 243 19-273 8-257 (263)
270 cd05060 PTKc_Syk_like Catalyti 100.0 2.9E-40 6.3E-45 275.7 25.5 244 23-279 1-254 (257)
271 cd05062 PTKc_IGF-1R Catalytic 100.0 2.9E-40 6.2E-45 278.8 25.6 246 19-274 8-274 (277)
272 cd05105 PTKc_PDGFR_alpha Catal 100.0 2E-40 4.2E-45 292.6 25.5 245 20-273 40-392 (400)
273 cd05033 PTKc_EphR Catalytic do 100.0 3.3E-40 7.2E-45 276.7 25.7 245 19-273 6-260 (266)
274 cd05118 STKc_CMGC Catalytic do 100.0 9.5E-41 2.1E-45 282.2 22.5 250 20-277 2-283 (283)
275 cd05049 PTKc_Trk Catalytic dom 100.0 2.2E-40 4.8E-45 279.7 24.7 245 19-273 7-276 (280)
276 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.3E-40 7.1E-45 278.5 25.4 247 19-274 8-274 (277)
277 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-40 5E-45 283.0 24.6 245 20-274 10-276 (303)
278 KOG0194 Protein tyrosine kinas 100.0 1.9E-41 4.2E-46 295.4 18.1 251 21-280 161-420 (474)
279 KOG1026 Nerve growth factor re 100.0 1.5E-41 3.3E-46 305.7 17.9 254 20-285 489-767 (774)
280 cd05035 PTKc_Axl_like Catalyti 100.0 3.9E-40 8.4E-45 277.1 25.4 247 20-273 2-267 (273)
281 cd05089 PTKc_Tie1 Catalytic do 100.0 2.9E-40 6.3E-45 281.6 24.8 245 20-274 5-271 (297)
282 cd05090 PTKc_Ror1 Catalytic do 100.0 4.3E-40 9.4E-45 278.5 25.6 246 19-274 7-279 (283)
283 cd05072 PTKc_Lyn Catalytic dom 100.0 3.9E-40 8.5E-45 275.5 25.0 247 18-279 7-260 (261)
284 cd07830 STKc_MAK_like Catalyti 100.0 2.7E-40 5.8E-45 279.6 24.2 249 20-277 2-283 (283)
285 cd08216 PK_STRAD Pseudokinase 100.0 1.7E-40 3.8E-45 285.0 23.3 248 29-283 12-304 (314)
286 cd05075 PTKc_Axl Catalytic dom 100.0 4.6E-40 1E-44 276.6 25.2 248 20-274 2-267 (272)
287 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.2E-40 4.8E-45 287.8 23.9 252 14-274 5-335 (343)
288 KOG0612 Rho-associated, coiled 100.0 3.2E-42 7E-47 316.3 12.8 258 20-284 78-348 (1317)
289 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.9E-40 1.3E-44 273.7 25.4 242 19-273 6-253 (256)
290 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.9E-40 4.1E-45 277.4 22.4 243 19-273 8-256 (261)
291 cd05082 PTKc_Csk Catalytic dom 100.0 5.6E-40 1.2E-44 273.9 25.2 239 19-273 8-251 (256)
292 cd05108 PTKc_EGFR Catalytic do 100.0 3E-40 6.4E-45 283.9 24.2 247 16-274 7-264 (316)
293 KOG0986 G protein-coupled rece 100.0 5.5E-42 1.2E-46 288.4 12.7 263 15-283 183-455 (591)
294 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-39 2.8E-44 280.1 27.7 258 12-281 21-284 (317)
295 cd06634 STKc_TAO2 Catalytic do 100.0 4.8E-40 1E-44 281.7 24.7 261 9-281 8-274 (308)
296 cd05071 PTKc_Src Catalytic dom 100.0 5E-40 1.1E-44 275.2 24.3 243 16-273 6-255 (262)
297 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-39 2.4E-44 272.8 26.3 242 19-273 8-256 (261)
298 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.5E-40 1.8E-44 272.9 25.4 243 19-274 6-254 (256)
299 cd05094 PTKc_TrkC Catalytic do 100.0 7.3E-40 1.6E-44 278.3 25.1 253 19-284 7-286 (291)
300 cd05051 PTKc_DDR Catalytic dom 100.0 9.4E-40 2E-44 278.1 25.8 249 16-273 5-292 (296)
301 cd05091 PTKc_Ror2 Catalytic do 100.0 5.4E-40 1.2E-44 277.9 24.1 245 19-273 7-278 (283)
302 cd05032 PTKc_InsR_like Catalyt 100.0 1E-39 2.3E-44 275.2 25.7 245 19-273 8-273 (277)
303 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-39 2.6E-44 275.9 25.9 247 19-273 6-278 (284)
304 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-39 3.2E-44 271.6 25.7 239 24-273 2-250 (257)
305 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-39 2.7E-44 275.2 25.5 251 18-281 8-269 (279)
306 cd05092 PTKc_TrkA Catalytic do 100.0 9.7E-40 2.1E-44 276.1 24.8 244 19-273 7-276 (280)
307 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-39 2.6E-44 271.9 25.0 242 19-273 6-253 (256)
308 cd05055 PTKc_PDGFR Catalytic d 100.0 1.5E-39 3.3E-44 277.8 26.0 246 19-273 37-296 (302)
309 cd08222 STKc_Nek11 Catalytic d 100.0 4.3E-40 9.4E-45 275.1 22.1 250 20-277 3-260 (260)
310 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-39 2.4E-44 272.7 24.5 247 16-279 6-259 (260)
311 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.7E-39 3.7E-44 271.5 25.5 245 19-279 8-259 (260)
312 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-39 2.5E-44 272.0 24.3 241 23-273 1-253 (257)
313 cd07829 STKc_CDK_like Catalyti 100.0 4E-40 8.7E-45 278.3 21.7 250 20-277 2-282 (282)
314 cd05039 PTKc_Csk_like Catalyti 100.0 3E-39 6.5E-44 269.4 26.4 241 17-273 6-251 (256)
315 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-39 3.4E-44 273.4 24.7 241 23-273 1-263 (270)
316 KOG0662 Cyclin-dependent kinas 100.0 1.2E-40 2.7E-45 249.5 15.9 255 17-280 3-289 (292)
317 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-39 6.5E-44 271.5 26.2 243 23-273 1-265 (269)
318 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-39 2.8E-44 277.0 24.3 245 19-273 14-286 (293)
319 smart00219 TyrKc Tyrosine kina 100.0 2.5E-39 5.5E-44 269.7 25.5 244 20-273 2-256 (258)
320 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-39 5E-44 272.1 25.2 245 19-273 6-263 (269)
321 KOG0614 cGMP-dependent protein 100.0 4.4E-42 9.6E-47 292.5 8.7 256 21-283 424-686 (732)
322 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-39 3.9E-44 271.4 24.3 247 18-279 7-260 (261)
323 cd05063 PTKc_EphR_A2 Catalytic 100.0 3E-39 6.5E-44 271.2 25.7 245 19-273 7-262 (268)
324 cd05097 PTKc_DDR_like Catalyti 100.0 1.9E-39 4E-44 276.3 24.4 249 16-273 5-291 (295)
325 cd05610 STKc_MASTL Catalytic d 100.0 2.1E-39 4.6E-44 302.6 27.0 149 16-171 4-152 (669)
326 KOG1095 Protein tyrosine kinas 100.0 4.1E-40 8.9E-45 306.2 21.9 247 17-273 692-956 (1025)
327 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.3E-39 7.3E-44 269.8 25.4 245 19-279 8-259 (260)
328 cd05045 PTKc_RET Catalytic dom 100.0 2.3E-39 5E-44 275.1 24.4 249 20-280 3-286 (290)
329 cd05043 PTK_Ryk Pseudokinase d 100.0 3.8E-39 8.2E-44 272.3 25.4 255 15-280 4-276 (280)
330 cd05111 PTK_HER3 Pseudokinase 100.0 5.7E-39 1.2E-43 271.2 26.2 243 20-273 10-263 (279)
331 cd05066 PTKc_EphR_A Catalytic 100.0 4.3E-39 9.3E-44 270.2 25.3 245 19-273 6-261 (267)
332 KOG4236 Serine/threonine prote 100.0 2.7E-41 5.9E-46 289.1 11.9 261 13-280 559-825 (888)
333 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.2E-39 6.9E-44 276.5 24.8 247 16-273 18-294 (307)
334 cd05057 PTKc_EGFR_like Catalyt 100.0 4.5E-39 9.9E-44 271.7 25.1 252 15-280 6-268 (279)
335 KOG1187 Serine/threonine prote 100.0 1.3E-39 2.8E-44 281.4 22.0 245 22-273 80-347 (361)
336 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.7E-39 1E-43 283.7 25.9 245 20-273 40-394 (401)
337 PHA03210 serine/threonine kina 100.0 5.7E-40 1.2E-44 297.7 20.7 259 16-281 148-461 (501)
338 KOG4645 MAPKKK (MAP kinase kin 100.0 6.4E-42 1.4E-46 318.0 7.5 253 20-280 1238-1500(1509)
339 cd05041 PTKc_Fes_like Catalyti 100.0 7.9E-39 1.7E-43 266.0 25.3 240 23-273 1-247 (251)
340 cd05095 PTKc_DDR2 Catalytic do 100.0 6.5E-39 1.4E-43 273.1 25.2 251 14-273 3-292 (296)
341 cd05056 PTKc_FAK Catalytic dom 100.0 5.9E-39 1.3E-43 269.7 24.6 249 19-280 8-265 (270)
342 cd05046 PTK_CCK4 Pseudokinase 100.0 6.8E-39 1.5E-43 270.0 25.0 245 20-273 8-271 (275)
343 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.9E-39 2.1E-43 274.2 26.1 248 15-273 11-288 (314)
344 cd05042 PTKc_Aatyk Catalytic d 100.0 8.8E-39 1.9E-43 268.5 25.1 243 23-273 1-265 (269)
345 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-38 2.8E-43 264.6 25.8 240 23-273 1-246 (250)
346 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.6E-39 7.9E-44 272.7 22.8 255 16-279 3-282 (284)
347 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-38 2.5E-43 267.8 25.6 249 19-273 2-265 (269)
348 cd05050 PTKc_Musk Catalytic do 100.0 8.4E-39 1.8E-43 271.3 24.7 244 20-273 8-284 (288)
349 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.7E-39 2.1E-43 276.6 25.3 248 17-274 12-289 (334)
350 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-38 3E-43 272.1 25.3 245 19-273 17-291 (304)
351 KOG0669 Cyclin T-dependent kin 100.0 1.8E-41 4E-46 266.2 6.6 261 13-280 14-321 (376)
352 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.2E-39 2E-43 266.7 23.3 233 23-273 1-256 (259)
353 cd05112 PTKc_Itk Catalytic dom 100.0 3.1E-38 6.7E-43 263.2 25.6 241 20-273 7-253 (256)
354 cd05073 PTKc_Hck Catalytic dom 100.0 2.8E-38 6.1E-43 264.2 25.3 241 19-273 8-255 (260)
355 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-38 2.3E-43 267.9 22.8 241 23-273 1-265 (269)
356 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-38 4.5E-43 264.1 24.1 239 16-273 6-249 (254)
357 cd05576 STKc_RPK118_like Catal 100.0 6.8E-39 1.5E-43 264.4 20.8 227 28-277 4-237 (237)
358 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-38 4.4E-43 267.2 24.0 237 23-274 1-272 (274)
359 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.8E-39 1.7E-43 267.4 21.1 235 23-273 1-255 (258)
360 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.1E-38 1.1E-42 263.9 25.7 242 24-273 2-264 (268)
361 cd05058 PTKc_Met_Ron Catalytic 100.0 6.5E-38 1.4E-42 262.1 25.9 242 23-273 1-254 (262)
362 KOG0666 Cyclin C-dependent kin 100.0 7.7E-40 1.7E-44 264.0 13.3 258 19-283 26-346 (438)
363 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.5E-38 9.7E-43 263.4 24.3 236 23-274 1-260 (262)
364 KOG0671 LAMMER dual specificit 100.0 6.9E-40 1.5E-44 270.7 13.0 266 3-281 74-413 (415)
365 cd05110 PTKc_HER4 Catalytic do 100.0 3.1E-38 6.6E-43 269.9 23.4 243 20-273 10-263 (303)
366 KOG0695 Serine/threonine prote 100.0 2E-39 4.4E-44 264.4 15.1 258 19-284 252-526 (593)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.6E-38 1.4E-42 263.7 24.9 247 20-273 2-267 (273)
368 KOG1006 Mitogen-activated prot 100.0 2E-40 4.3E-45 262.1 8.8 255 22-285 69-338 (361)
369 KOG0196 Tyrosine kinase, EPH ( 100.0 7.4E-40 1.6E-44 291.0 13.5 248 16-273 628-886 (996)
370 PHA02882 putative serine/threo 100.0 7.5E-38 1.6E-42 266.4 25.0 254 13-273 8-291 (294)
371 KOG0668 Casein kinase II, alph 100.0 1.1E-39 2.4E-44 252.9 12.2 261 13-286 35-334 (338)
372 KOG0603 Ribosomal protein S6 k 100.0 6.7E-39 1.4E-43 280.6 17.3 240 20-278 325-567 (612)
373 smart00220 S_TKc Serine/Threon 100.0 1.6E-37 3.6E-42 255.8 22.8 241 29-277 1-244 (244)
374 KOG1035 eIF-2alpha kinase GCN2 100.0 2.7E-38 5.8E-43 292.6 18.6 247 23-278 485-875 (1351)
375 KOG0696 Serine/threonine prote 100.0 2.4E-38 5.1E-43 264.2 12.7 256 20-284 352-616 (683)
376 KOG0587 Traf2- and Nck-interac 100.0 3.1E-37 6.7E-42 277.6 19.7 258 13-280 16-288 (953)
377 KOG4250 TANK binding protein k 100.0 4.2E-38 9E-43 278.0 13.8 224 9-238 6-245 (732)
378 PLN03225 Serine/threonine-prot 100.0 5.4E-37 1.2E-41 280.3 21.1 253 19-283 134-459 (566)
379 KOG4257 Focal adhesion tyrosin 100.0 1.5E-37 3.2E-42 270.7 16.2 241 22-273 394-644 (974)
380 KOG1094 Discoidin domain recep 100.0 2.4E-37 5.2E-42 267.5 16.9 254 14-279 536-803 (807)
381 KOG0199 ACK and related non-re 100.0 1.9E-37 4E-42 273.0 16.0 247 20-277 113-371 (1039)
382 KOG4278 Protein tyrosine kinas 100.0 5.8E-37 1.2E-41 267.1 17.3 242 20-273 270-518 (1157)
383 KOG1151 Tousled-like protein k 100.0 2.2E-37 4.8E-42 260.5 13.6 263 14-278 461-745 (775)
384 KOG1027 Serine/threonine prote 100.0 2.4E-37 5.3E-42 277.0 12.6 242 21-278 513-771 (903)
385 PLN03224 probable serine/threo 100.0 7.2E-35 1.6E-39 260.6 24.4 260 16-279 145-505 (507)
386 KOG0608 Warts/lats-like serine 100.0 3.2E-36 7E-41 262.8 14.6 257 22-284 634-938 (1034)
387 KOG0665 Jun-N-terminal kinase 100.0 4.2E-36 9.1E-41 243.1 13.8 257 14-280 15-316 (369)
388 KOG0670 U4/U6-associated splic 100.0 7.8E-37 1.7E-41 261.2 10.1 254 14-279 430-751 (752)
389 KOG1290 Serine/threonine prote 100.0 7E-34 1.5E-38 241.5 21.7 140 8-156 68-222 (590)
390 KOG0200 Fibroblast/platelet-de 100.0 5E-34 1.1E-38 263.1 22.3 249 20-279 299-578 (609)
391 KOG0984 Mitogen-activated prot 100.0 1.1E-34 2.4E-39 221.7 14.8 213 22-243 51-274 (282)
392 KOG2052 Activin A type IB rece 100.0 1.1E-34 2.5E-39 243.9 15.9 258 5-273 199-498 (513)
393 PLN00113 leucine-rich repeat r 100.0 2.4E-33 5.2E-38 273.8 22.4 238 21-280 694-951 (968)
394 KOG1025 Epidermal growth facto 100.0 8E-34 1.7E-38 253.9 15.6 242 21-273 700-952 (1177)
395 KOG3653 Transforming growth fa 100.0 4E-33 8.7E-38 236.2 16.9 241 20-271 213-496 (534)
396 KOG1167 Serine/threonine prote 100.0 6.1E-34 1.3E-38 238.3 11.5 254 16-282 35-389 (418)
397 cd00180 PKc Catalytic domain o 100.0 1.3E-31 2.9E-36 215.5 22.8 209 25-275 1-215 (215)
398 KOG0664 Nemo-like MAPK-related 100.0 5.4E-34 1.2E-38 226.8 6.4 253 23-281 59-350 (449)
399 KOG0576 Mitogen-activated prot 100.0 8.1E-34 1.8E-38 249.0 6.7 259 11-279 10-276 (829)
400 smart00221 STYKc Protein kinas 100.0 2E-30 4.4E-35 211.4 21.5 212 20-239 2-219 (225)
401 KOG1152 Signal transduction se 100.0 3.9E-32 8.5E-37 235.1 10.4 197 21-223 565-771 (772)
402 KOG1345 Serine/threonine kinas 100.0 2.3E-31 4.9E-36 211.4 9.4 258 10-279 18-292 (378)
403 KOG1024 Receptor-like protein 100.0 3E-30 6.5E-35 214.4 15.9 245 20-273 287-550 (563)
404 smart00750 KIND kinase non-cat 100.0 6E-29 1.3E-33 195.7 12.2 160 105-279 1-170 (176)
405 PLN00181 protein SPA1-RELATED; 100.0 3E-29 6.5E-34 239.5 10.1 181 93-280 53-271 (793)
406 KOG1165 Casein kinase (serine/ 100.0 4.9E-27 1.1E-31 191.7 16.7 200 14-224 25-239 (449)
407 KOG1163 Casein kinase (serine/ 99.9 2.7E-27 5.9E-32 185.4 13.2 243 14-268 13-274 (341)
408 KOG0590 Checkpoint kinase and 99.9 1.7E-28 3.7E-33 224.1 7.0 261 15-281 316-592 (601)
409 KOG1164 Casein kinase (serine/ 99.9 6.6E-26 1.4E-30 195.0 22.0 247 17-273 19-292 (322)
410 KOG1240 Protein kinase contain 99.9 1.8E-27 3.8E-32 219.4 5.9 243 19-274 25-291 (1431)
411 COG0515 SPS1 Serine/threonine 99.9 7.3E-24 1.6E-28 181.6 26.1 256 19-283 2-284 (384)
412 PRK09188 serine/threonine prot 99.9 4E-25 8.6E-30 190.3 16.0 172 9-195 10-193 (365)
413 PF14531 Kinase-like: Kinase-l 99.9 3.5E-26 7.6E-31 189.1 9.0 232 20-265 15-288 (288)
414 KOG0603 Ribosomal protein S6 k 99.9 3.9E-26 8.5E-31 200.7 4.6 242 24-283 1-252 (612)
415 KOG0195 Integrin-linked kinase 99.9 2.7E-24 5.8E-29 171.6 8.8 241 20-272 193-440 (448)
416 cd05147 RIO1_euk RIO kinase fa 99.9 2E-23 4.3E-28 165.7 13.3 145 22-175 2-169 (190)
417 PRK10359 lipopolysaccharide co 99.9 2.6E-23 5.7E-28 167.2 11.0 177 14-216 29-217 (232)
418 cd05145 RIO1_like RIO kinase f 99.9 2.7E-22 5.8E-27 159.6 14.3 145 22-175 2-169 (190)
419 KOG0606 Microtubule-associated 99.9 2.7E-22 5.9E-27 185.1 11.6 222 15-283 82-324 (1205)
420 PRK12274 serine/threonine prot 99.9 2.6E-21 5.6E-26 152.6 14.1 185 21-223 6-209 (218)
421 PRK10345 hypothetical protein; 99.8 7.3E-20 1.6E-24 146.7 14.8 137 22-170 7-156 (210)
422 KOG4158 BRPK/PTEN-induced prot 99.8 4.7E-20 1E-24 154.5 13.7 189 76-269 274-505 (598)
423 KOG1166 Mitotic checkpoint ser 99.8 1.3E-20 2.8E-25 176.6 11.5 199 8-218 689-900 (974)
424 smart00090 RIO RIO-like kinase 99.8 4.9E-20 1.1E-24 151.1 12.7 151 16-175 27-200 (237)
425 PRK14879 serine/threonine prot 99.8 1.5E-18 3.3E-23 140.5 14.0 138 23-172 2-143 (211)
426 KOG0590 Checkpoint kinase and 99.8 2E-20 4.4E-25 171.3 0.4 257 15-279 19-291 (601)
427 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.9E-19 4.1E-24 155.9 6.3 175 93-277 329-515 (516)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 4.5E-18 9.9E-23 136.4 13.2 134 24-172 1-138 (199)
429 KOG1023 Natriuretic peptide re 99.8 1.5E-18 3.3E-23 152.6 10.8 198 72-273 1-219 (484)
430 cd05144 RIO2_C RIO kinase fami 99.8 4.1E-18 8.9E-23 136.6 12.3 143 17-175 15-177 (198)
431 PRK09605 bifunctional UGMP fam 99.8 1.6E-17 3.4E-22 152.3 14.5 141 17-173 333-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 3.4E-17 7.3E-22 130.0 11.6 141 22-175 2-166 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.7 4E-16 8.6E-21 128.3 14.4 142 22-173 36-192 (239)
434 KOG1266 Protein kinase [Signal 99.7 3.5E-18 7.6E-23 140.1 2.0 267 7-279 53-336 (458)
435 cd05120 APH_ChoK_like Aminogly 99.6 4.9E-15 1.1E-19 112.9 12.0 134 21-172 2-138 (155)
436 KOG1243 Protein kinase [Genera 99.6 4.3E-14 9.3E-19 126.4 16.6 180 23-218 18-200 (690)
437 KOG0601 Cyclin-dependent kinas 99.6 5.5E-15 1.2E-19 130.5 6.5 252 20-280 117-385 (524)
438 cd05146 RIO3_euk RIO kinase fa 99.5 6.7E-13 1.5E-17 104.7 12.8 145 22-176 2-177 (197)
439 KOG0606 Microtubule-associated 99.5 3.1E-14 6.7E-19 132.5 5.2 257 22-284 809-1102(1205)
440 TIGR01982 UbiB 2-polyprenylphe 99.5 6.7E-13 1.5E-17 118.3 12.4 145 23-175 123-309 (437)
441 PRK04750 ubiB putative ubiquin 99.5 2.5E-12 5.5E-17 116.2 15.5 142 23-175 125-316 (537)
442 COG4248 Uncharacterized protei 99.4 6.4E-12 1.4E-16 107.2 15.5 240 21-273 15-295 (637)
443 cd05151 ChoK Choline Kinase (C 99.4 6.5E-13 1.4E-17 103.6 8.9 129 22-171 3-135 (170)
444 COG3642 Mn2+-dependent serine/ 99.4 1.1E-11 2.4E-16 95.0 12.3 136 23-174 2-142 (204)
445 KOG3741 Poly(A) ribonuclease s 99.3 9.5E-11 2.1E-15 102.4 17.4 214 29-274 288-521 (655)
446 KOG3087 Serine/threonine prote 99.3 4.1E-11 9E-16 91.5 12.3 146 22-173 12-166 (229)
447 KOG0601 Cyclin-dependent kinas 99.2 7.6E-12 1.7E-16 110.8 5.6 251 14-279 263-519 (524)
448 cd05154 ACAD10_11_like Acyl-Co 99.2 1.2E-10 2.7E-15 94.6 11.1 144 23-171 4-205 (223)
449 KOG2137 Protein kinase [Signal 99.2 1.3E-11 2.8E-16 111.1 4.4 153 126-280 105-271 (700)
450 PF01163 RIO1: RIO1 family; I 99.2 4.8E-10 1E-14 88.2 12.0 130 32-174 1-157 (188)
451 PRK15123 lipopolysaccharide co 99.1 1.4E-09 2.9E-14 90.7 14.0 138 31-172 36-194 (268)
452 COG0478 RIO-like serine/threon 99.0 2.1E-09 4.6E-14 87.4 10.5 141 18-173 92-252 (304)
453 PRK09902 hypothetical protein; 99.0 1.2E-08 2.6E-13 80.9 11.3 141 26-171 27-178 (216)
454 PF06293 Kdo: Lipopolysacchari 98.9 1.2E-08 2.7E-13 82.0 9.2 109 62-173 55-171 (206)
455 KOG1035 eIF-2alpha kinase GCN2 98.7 8.5E-08 1.9E-12 91.6 10.9 211 60-285 224-445 (1351)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 2.5E-07 5.4E-12 75.5 12.4 135 23-171 7-181 (226)
457 COG1718 RIO1 Serine/threonine 98.7 1.9E-07 4.2E-12 75.3 10.7 144 22-176 53-219 (268)
458 PF06176 WaaY: Lipopolysacchar 98.6 4.1E-07 8.8E-12 72.6 9.8 66 94-171 117-182 (229)
459 COG2112 Predicted Ser/Thr prot 98.6 8E-07 1.7E-11 68.0 10.8 136 17-176 22-159 (201)
460 PF01636 APH: Phosphotransfera 98.6 1.5E-06 3.3E-11 71.0 12.9 80 22-109 2-84 (239)
461 COG0661 AarF Predicted unusual 98.5 6E-07 1.3E-11 81.1 10.6 144 23-175 131-317 (517)
462 KOG1235 Predicted unusual prot 98.3 5.7E-06 1.2E-10 74.8 10.8 151 16-176 159-358 (538)
463 cd05150 APH Aminoglycoside 3'- 98.3 9.1E-06 2E-10 67.2 11.4 74 25-109 6-81 (244)
464 KOG0576 Mitogen-activated prot 98.3 8.1E-08 1.8E-12 86.5 -1.6 244 13-280 239-490 (829)
465 cd05155 APH_ChoK_like_1 Unchar 98.2 1E-05 2.2E-10 66.5 9.9 74 23-107 3-81 (235)
466 PLN02876 acyl-CoA dehydrogenas 98.2 3.7E-05 8.1E-10 74.5 13.9 149 22-173 43-258 (822)
467 KOG2270 Serine/threonine prote 98.2 3.2E-05 7E-10 66.1 11.3 143 23-174 150-315 (520)
468 PF10707 YrbL-PhoP_reg: PhoP r 98.1 0.00015 3.3E-09 57.6 12.9 136 23-170 7-170 (199)
469 cd05157 ETNK_euk Ethanolamine 98.0 0.0001 2.2E-09 60.5 11.2 75 23-107 4-79 (235)
470 PF13095 FTA2: Kinetochore Sim 98.0 0.00014 3E-09 57.6 11.0 128 20-170 40-206 (207)
471 PRK10593 hypothetical protein; 98.0 0.00027 5.8E-09 60.2 13.5 78 22-107 19-100 (297)
472 TIGR02721 ycfN_thiK thiamine k 97.9 5.4E-05 1.2E-09 63.1 8.4 133 25-171 4-174 (256)
473 PRK09550 mtnK methylthioribose 97.9 0.00065 1.4E-08 59.9 14.5 81 22-106 31-117 (401)
474 KOG1826 Ras GTPase activating 97.8 5.8E-06 1.3E-10 81.6 0.1 215 62-283 1273-1501(2724)
475 PF12260 PIP49_C: Protein-kina 97.8 0.00012 2.6E-09 57.9 7.6 101 67-174 8-113 (188)
476 KOG2268 Serine/threonine prote 97.7 4.2E-05 9.2E-10 64.4 3.7 141 20-176 95-255 (465)
477 cd05153 HomoserineK_II Homoser 97.6 0.00048 1E-08 58.6 9.9 140 22-171 19-204 (296)
478 KOG1093 Predicted protein kina 97.6 0.0002 4.3E-09 63.9 7.4 163 63-280 27-200 (725)
479 cd05156 ChoK_euk Choline Kinas 97.5 0.0018 4E-08 55.2 11.3 75 23-108 4-85 (302)
480 TIGR00938 thrB_alt homoserine 97.5 0.0018 4E-08 55.4 11.3 141 22-171 27-216 (307)
481 PRK05231 homoserine kinase; Pr 97.4 0.0054 1.2E-07 52.8 13.9 28 143-171 189-216 (319)
482 COG3173 Predicted aminoglycosi 97.4 0.0024 5.2E-08 54.5 11.1 142 22-174 30-230 (321)
483 cd05152 MPH2' Macrolide 2'-Pho 97.3 0.0037 8E-08 52.7 11.1 29 142-171 186-215 (276)
484 TIGR01767 MTRK 5-methylthiorib 97.2 0.0061 1.3E-07 52.9 11.7 84 24-111 2-92 (370)
485 PLN02236 choline kinase 97.2 0.0036 7.7E-08 54.6 9.8 138 23-171 42-230 (344)
486 PLN02756 S-methyl-5-thioribose 97.1 0.0086 1.9E-07 52.9 11.6 77 22-104 37-119 (418)
487 PRK12396 5-methylribose kinase 97.1 0.0046 1E-07 54.3 9.7 86 22-111 34-125 (409)
488 PLN02421 phosphotransferase, a 97.0 0.0058 1.2E-07 52.9 9.2 140 22-172 19-213 (330)
489 PTZ00384 choline kinase; Provi 96.8 0.011 2.3E-07 52.2 9.5 80 22-107 55-136 (383)
490 TIGR02904 spore_ysxE spore coa 96.6 0.031 6.6E-07 47.9 10.9 29 142-171 197-225 (309)
491 COG5072 ALK1 Serine/threonine 96.5 0.029 6.2E-07 48.6 9.9 75 91-173 297-371 (488)
492 PF03881 Fructosamin_kin: Fruc 96.4 0.043 9.4E-07 46.4 10.6 73 22-105 22-97 (288)
493 PF07387 Seadorna_VP7: Seadorn 96.1 0.048 1E-06 44.0 8.4 103 44-169 87-189 (308)
494 COG2334 Putative homoserine ki 95.9 0.095 2E-06 45.3 10.1 29 143-171 199-227 (331)
495 KOG1236 Predicted unusual prot 95.7 0.054 1.2E-06 47.6 7.8 64 94-160 319-383 (565)
496 COG3001 Uncharacterized protei 95.5 0.25 5.5E-06 40.1 10.3 75 22-107 21-98 (286)
497 PRK11768 serine/threonine prot 95.3 1.1 2.3E-05 38.8 14.5 26 143-171 198-223 (325)
498 PF02958 EcKinase: Ecdysteroid 95.0 0.25 5.3E-06 41.9 9.8 30 142-171 216-249 (294)
499 PRK06148 hypothetical protein; 94.9 1.4 3E-05 44.3 15.9 31 142-172 204-236 (1013)
500 PTZ00296 choline kinase; Provi 94.9 0.25 5.4E-06 44.6 9.8 29 142-172 285-313 (442)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-56 Score=368.00 Aligned_cols=254 Identities=31% Similarity=0.565 Sum_probs=230.1
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
..+.||+|+.|+||+|.|+.|++.+|+|++... .++...+.+.+|+++++..+|||||.+++.|..... .++++||
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~---~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~mE 158 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN---IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICME 158 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc---CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeehh
Confidence 367899999999999999999999999999543 267888999999999999999999999999987753 6999999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+||||.+++...+++++..+..++.++++||.|||. ++ ++||||||+|+|++.+ |.|||||||.+...... ..
T Consensus 159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS-~a 234 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSK-GEVKICDFGVSGILVNS-IA 234 (364)
T ss_pred hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccC-CCEEeccccccHHhhhh-hc
Confidence 99999999999998999999999999999999999995 88 9999999999999999 99999999999887666 56
Q ss_pred ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCC----CcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 180 HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
.+..||..|||||++.+. |+.++||||||++++|+++|+.||... ...-.....+..+.+|.......+++++.+
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~F 314 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSF 314 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence 778899999999988876 999999999999999999999999863 455666777777777777666789999999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 255 IEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+..||+ ||.+||++.|+++|||+++...
T Consensus 315 V~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 315 VSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999998 9999999999999999997654
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-56 Score=384.56 Aligned_cols=264 Identities=31% Similarity=0.535 Sum_probs=231.7
Q ss_pred CceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeE
Q 022956 8 PFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVW 87 (289)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 87 (289)
|-++.++..++|..++.||+|+|+++|.+.+..+|+.||+|++...... .....+.+.+|+++.+.|+|||||+++++|
T Consensus 9 p~~i~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-k~~~reKv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 9 PEVIEDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-KPKQREKVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred CCeeecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-CcchHHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence 4445565667778899999999999999999999999999999876543 455678899999999999999999999998
Q ss_pred EeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 88 LDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
.+ ++.+|+|.|+|..++|..+++..+.++|.+++.++.||+.||.|||+++ |+|||||..|++++.+ .+|||+||
T Consensus 88 ED--s~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~-~~VKIgDF 162 (592)
T KOG0575|consen 88 ED--SNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNEN-MNVKIGDF 162 (592)
T ss_pred ec--CCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCc-CcEEeccc
Confidence 44 4789999999999999999999999999999999999999999999999 9999999999999999 79999999
Q ss_pred CCccccCCc-cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 168 GFAAIVGRS-HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 168 g~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
|+|...... ....+.||||.|.|||++.+. .+..+||||+||+||-|+.|+.||.. ......++.+..+... ++.
T Consensus 163 GLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-k~vkety~~Ik~~~Y~--~P~ 239 (592)
T KOG0575|consen 163 GLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-KTVKETYNKIKLNEYS--MPS 239 (592)
T ss_pred ceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-chHHHHHHHHHhcCcc--ccc
Confidence 999998754 667788999999999977654 99999999999999999999999987 4445555555443322 445
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
..+.++++||.+||+ ||.+|||+++||.|+||+.=
T Consensus 240 ~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 240 HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 789999999999998 99999999999999999543
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-57 Score=375.89 Aligned_cols=262 Identities=26% Similarity=0.384 Sum_probs=227.2
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCH---HHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDP---VLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
..||-+.+.||+|+||.|-+|..+.||+.||||++......... .....+.+|+++|++|+||+||+++++|..+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~-- 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP-- 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC--
Confidence 34446899999999999999999999999999999876543211 1234467999999999999999999998554
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--CCcEEEeccCCc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--IGQVKIGDLGFA 170 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~~~~~l~d~g~~ 170 (289)
++.|+|+||++||.|.+.+..++.+.+.....+++|++.|+.|||+.| ++||||||+|||+..+ .-.+||+|||+|
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccchh
Confidence 678999999999999999999999999999999999999999999999 9999999999999654 136999999999
Q ss_pred cccCCccccccCCCCCCCCCCcccccC---C-CCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC--CCC
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYEED---Y-TEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ--ALN 244 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~~~---~-~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 244 (289)
++.+......+.||||.|.|||++.+. + ..+.|+|||||++|-+++|..||++........+++.++.... ..+
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w 406 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW 406 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence 999888888899999999999977643 3 3478999999999999999999998766666777777775442 345
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
..++++..+||..||. ||++|||++++|+||||+...
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 5679999999999999 999999999999999999665
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-53 Score=347.89 Aligned_cols=256 Identities=25% Similarity=0.430 Sum_probs=225.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||.|+||+||+|+.+.|++.||+|+++.....+. ...+...+|..+|.+++||.||.+...|.+. ..+|+|+
T Consensus 28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--~kLylVl 104 (357)
T KOG0598|consen 28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-KEVRHTKAERNILSKIKHPFIVKLIYSFQTE--EKLYLVL 104 (357)
T ss_pred eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-hhHHHHHHHHHHHHhCCCCcEeeeEEecccC--CeEEEEE
Confidence 678999999999999999999999999999998765433 4577899999999999999999999888544 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~~ 178 (289)
||+.||.|...+++.+.+++..+.-++..|+.||.|||++| ++||||||+|||+|.+ |.++|+|||++... .....
T Consensus 105 d~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~-GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQ-GHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred eccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCC-CcEEEeccccchhcccCCCc
Confidence 99999999999999999999999999999999999999999 9999999999999999 99999999999854 45556
Q ss_pred cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
+.+.|||+.|||||++. .+++.++|.||||+++|+|++|..||.+.+..... +.+..+. ....+...+++.++++.+
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~-~~I~~~k-~~~~p~~ls~~ardll~~ 259 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY-DKILKGK-LPLPPGYLSEEARDLLKK 259 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH-HHHhcCc-CCCCCccCCHHHHHHHHH
Confidence 67789999999999665 55999999999999999999999999875544444 4444433 233455578999999999
Q ss_pred HHc-CCCCCC----CHHHHhcCcccccCCCC
Q 022956 258 CIA-QPRARP----SASELLKDPFFSELNDD 283 (289)
Q Consensus 258 ~l~-dp~~Rp----s~~~il~h~~~~~~~~~ 283 (289)
+|+ ||++|. ++++|-+||||+.++|+
T Consensus 260 LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~ 290 (357)
T KOG0598|consen 260 LLKRDPRQRLGGPGDAEEIKRHPFFKGINWE 290 (357)
T ss_pred HhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence 998 999994 89999999999999986
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-52 Score=357.06 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=222.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+++.||+|+|++|++|.++.+++.||||++...... .+...+.+..|-.+|.+| .||.|++++..|.++ ..+|+|
T Consensus 76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii-ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~--~sLYFv 152 (604)
T KOG0592|consen 76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII-KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE--ESLYFV 152 (604)
T ss_pred chhheeccccceeEEEeeecCCCceeeHhhhhHHHHH-hhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc--cceEEE
Confidence 6889999999999999999999999999999876543 233345577788889999 899999999998666 579999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+++|.|.+++.+.+.+++.-++.++.+|+.||+|||++| ++||||||+|||+|.| |+++|+|||.|..++....
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~d-mhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKD-GHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCC-CcEEEeeccccccCChhhc
Confidence 999999999999999999999999999999999999999999 9999999999999999 9999999999987742211
Q ss_pred ----------c----ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 179 ----------A----HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 179 ----------~----~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
. .+.+||-.|.+||++.. ..++.+|+|+||||+|+|+.|..||.+..+...++.++.-.. .+
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y---~f 306 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY---EF 306 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc---cC
Confidence 1 34679999999997765 489999999999999999999999998666655555544322 24
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+...++.+++|++++|. ||.+|+++.||-+||||.+++|++
T Consensus 307 p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 307 PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred CCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence 55668999999999998 999999999999999999999875
No 6
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-52 Score=365.60 Aligned_cols=279 Identities=60% Similarity=1.078 Sum_probs=264.4
Q ss_pred CCCCCCceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEE
Q 022956 3 DRDGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIV 82 (289)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 82 (289)
..+.+.+...++++||.++.++||.|+|.+||+|.|..+|..||+-.++.....+.+...++|..|+.+|+.|+||||++
T Consensus 26 e~~~~~~ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIir 105 (632)
T KOG0584|consen 26 EPDESEFVEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIR 105 (632)
T ss_pred ccccccccccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceee
Confidence 45677788999999999999999999999999999999999999999988888888888999999999999999999999
Q ss_pred eeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcE
Q 022956 83 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 162 (289)
Q Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~ 162 (289)
++..+.+..++.+.+|+|.+.+|+|..|+.+.+.++.+.+..|++||+.||.|||++.||++|||||-+||||+.+.|.|
T Consensus 106 fy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~V 185 (632)
T KOG0584|consen 106 FYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEV 185 (632)
T ss_pred eeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCce
Confidence 99999988888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCccccCCccccccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 163 KIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 163 ~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
||+|+|+|+......... ..|||.|||||.+...|+...||||||..+.||+|+.-||+.-.+..+++..+.++..|..
T Consensus 186 KIGDLGLAtl~r~s~aks-vIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHAKS-VIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA 264 (632)
T ss_pred eecchhHHHHhhccccce-eccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH
Confidence 999999999876664443 7899999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHcCCCCCCCHHHHhcCcccccCCC
Q 022956 243 LNKVKDPEVKAFIEKCIAQPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+....+++++++|.+||...++|+|+.++|.||||+.-..
T Consensus 265 l~kV~dPevr~fIekCl~~~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 265 LSKVKDPEVREFIEKCLATKSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred hhccCCHHHHHHHHHHhcCchhccCHHHHhhChhhccccc
Confidence 9999999999999999988999999999999999998644
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-51 Score=341.69 Aligned_cols=264 Identities=25% Similarity=0.460 Sum_probs=229.8
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.+...+.| .+.+.||+|+||+||+|+++.++..||||.+.+..+ +...++.+..|+++|+.++|||||.++++....
T Consensus 5 ~~~~~~~y-~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 5 SMRVVGDY-ELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDD 81 (429)
T ss_pred cccccccc-eehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence 34566777 478889999999999999999999999999998876 677788899999999999999999999988554
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--C---CcEEEe
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--I---GQVKIG 165 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~---~~~~l~ 165 (289)
+++|+|||||.||+|.+++...+.+++..+..++.|++.||++||+++ ++||||||+|||++.+ . -.+||+
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEec
Confidence 689999999999999999999999999999999999999999999999 9999999999999753 1 369999
Q ss_pred ccCCccccCCccccccCCCCCCCCCCccc-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC
Q 022956 166 DLGFAAIVGRSHAAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN 244 (289)
Q Consensus 166 d~g~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
|||+|+...........||+|-|||||++ ...|+-++|+||+|+|+|+|++|..||......+-..............+
T Consensus 158 DFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~ 237 (429)
T KOG0595|consen 158 DFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP 237 (429)
T ss_pred ccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh
Confidence 99999999988888899999999999987 56699999999999999999999999987554444443333333444555
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
...++...+|+...++ ++.+|.+.++-+.|+++..-.
T Consensus 238 ~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 238 AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 5567777788888887 999999999999999987654
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.6e-52 Score=333.95 Aligned_cols=256 Identities=25% Similarity=0.420 Sum_probs=214.8
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+|.+ ..++|+|+||.||+++++.||+.||||++..+. +++...+-..+|+++|++++|+|+|.++++|.. ...++
T Consensus 3 kYE~-LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--krklh 77 (396)
T KOG0593|consen 3 KYEK-LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--KRKLH 77 (396)
T ss_pred HHhh-hhccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--cceeE
Confidence 4543 788999999999999999999999999997553 467778889999999999999999999999944 46799
Q ss_pred EEeccccCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 97 FITEVCTSGNLRTYRK-KHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+|+|||+. ++.+.++ ....++...+.++++|++.|+.|+|+++ ++||||||+||+++.+ |.+||||||+|+....
T Consensus 78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~-gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQN-GVVKLCDFGFARTLSA 153 (396)
T ss_pred EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecC-CcEEeccchhhHhhcC
Confidence 99999988 5544454 4456999999999999999999999999 9999999999999999 9999999999998874
Q ss_pred ccc-cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC--CC----------
Q 022956 176 SHA-AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KP---------- 240 (289)
Q Consensus 176 ~~~-~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~~---------- 240 (289)
+.. -..+..|.+|.|||.+.++ |.++.|||++||++.||++|+..|++.++.++++.+...-. .+
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 433 3345678899999988775 99999999999999999999999999888888765433311 11
Q ss_pred -------CCC---------CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 241 -------QAL---------NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 241 -------~~~---------~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+.. -...+..+.+|+.+||+ ||.+|++.+|+|.|++|+++.
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 000 01124577899999999 999999999999999997763
No 9
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-50 Score=347.46 Aligned_cols=258 Identities=28% Similarity=0.539 Sum_probs=220.9
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC-HHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQ 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 91 (289)
..++| .+++.||+|+||+|+.|.+..+|..||+|++........ ....+.+.+|+.++++++ ||||++++.++...
T Consensus 15 ~~g~y-~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~- 92 (370)
T KOG0583|consen 15 SIGKY-ELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP- 92 (370)
T ss_pred ccCce-eeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-
Confidence 44565 789999999999999999999999999997766422111 134566778999999999 99999999999666
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
..+++||||+.||.|.+++.+.+++.+..+..++.|+++|++|||++| ++||||||+|++++.+.+++||+|||++.
T Consensus 93 -~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 93 -TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred -CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 459999999999999999999899999999999999999999999999 99999999999999886799999999999
Q ss_pred cc-CCccccccCCCCCCCCCCcccccC--C-CCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 172 IV-GRSHAAHSIIGTPEYMAPELYEED--Y-TEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 172 ~~-~~~~~~~~~~~~~~~~aPE~~~~~--~-~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
.. .........+|++.|+|||++.+. | ..++||||+|+++|.|++|..||...... .....+..+... .+...
T Consensus 170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~-~l~~ki~~~~~~--~p~~~ 246 (370)
T KOG0583|consen 170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP-NLYRKIRKGEFK--IPSYL 246 (370)
T ss_pred ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH-HHHHHHhcCCcc--CCCCc
Confidence 88 455667788999999999987753 4 46799999999999999999999984433 444444444322 34444
Q ss_pred -ChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 248 -DPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 248 -~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
++.++.|+.+||. ||.+|+++.+|+.||||+.
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999999999999 9999999999999999997
No 10
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-51 Score=325.37 Aligned_cols=254 Identities=25% Similarity=0.462 Sum_probs=224.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||.|+||.|.+++++.+|..||+|++.....- .-...+...+|..+|+.+.||.++.+.+.+.+. +.+++||
T Consensus 47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vV-klKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--~~lymvm 123 (355)
T KOG0616|consen 47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVV-KLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--SNLYMVM 123 (355)
T ss_pred hheeeeccCccceEEEEEEccCCceeehhhcCHHHHH-HHHHHHHHhhHHHHHhhccCceeEEEEEeeccC--CeEEEEE
Confidence 4578999999999999999999999999999865432 233456688999999999999999999988655 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||++||.|+.++.+.+++++..+..++.|++.||+|||+++ +++|||||+|||+|.+ |.+|++|||+|...... +
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~-G~iKitDFGFAK~v~~r--T 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQN-GHIKITDFGFAKRVSGR--T 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccC-CcEEEEeccceEEecCc--E
Confidence 99999999999999999999999999999999999999999 9999999999999999 99999999999877654 7
Q ss_pred ccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
.+.||||.|+|||++. ++++.++|-|+||+++|||+.|..||...........++..... .+...++.+++|+.++
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~---fP~~fs~~~kdLl~~L 275 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK---FPSYFSSDAKDLLKKL 275 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc---CCcccCHHHHHHHHHH
Confidence 7899999999999655 55999999999999999999999999987776655555555433 5667799999999999
Q ss_pred Hc-CCCCC-----CCHHHHhcCcccccCCCCC
Q 022956 259 IA-QPRAR-----PSASELLKDPFFSELNDDD 284 (289)
Q Consensus 259 l~-dp~~R-----ps~~~il~h~~~~~~~~~~ 284 (289)
|+ |-.+| ...++|..||||++++|.+
T Consensus 276 L~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~ 307 (355)
T KOG0616|consen 276 LQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEA 307 (355)
T ss_pred HhhhhHhhhcCcCCCccccccCcccccccHHH
Confidence 98 99999 4678999999999998854
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-52 Score=331.63 Aligned_cols=246 Identities=29% Similarity=0.519 Sum_probs=219.2
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||.|.||.||+|.+..+|+.+|.|.+..... +....+....|+.+|++|+||||++.++.-+.+++..++||
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m--d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM--DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc--cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4789999999999999999999999999999986655 67778889999999999999999999997677776779999
Q ss_pred eccccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhcCCCC--ceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 99 TEVCTSGNLRTYRK----KHRHVSIKALKKWSKQVLEGLEYLHTHEPC--IIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 99 ~e~~~~~sL~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~--~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
||+|.+|.|...++ +.+.+++..+++++.|++.||.++|+.-+. ++||||||.||+++.+ |.+||+|||++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~-gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN-GVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC-CceeeccchhHhH
Confidence 99999999999886 357899999999999999999999994333 9999999999999999 9999999999998
Q ss_pred cCCccc-cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 173 VGRSHA-AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 173 ~~~~~~-~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
+..... ..+..|||.||+||+.. .+|++++|||||||++|||+.-+.||.+. +...+...+.++..++.+....|..
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~ 256 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTD 256 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhH
Confidence 876544 45679999999999665 55999999999999999999999999884 7777777788876666666888999
Q ss_pred HHHHHHHHHc-CCCCCCCH
Q 022956 251 VKAFIEKCIA-QPRARPSA 268 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~ 268 (289)
++.|+..|+. ||+.||++
T Consensus 257 l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 257 LRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHccCCcccCCCc
Confidence 9999999999 99999985
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-51 Score=339.03 Aligned_cols=255 Identities=31% Similarity=0.540 Sum_probs=218.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
...+.||.|+||+||++.++++|...|||.+.... .+. .+.+.+|+++|++++||+||+.++.....+...++++|
T Consensus 20 ~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 20 SKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred hhhccccCccceEEEEEEecCCCcceeeeeeeccc---chh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 56899999999999999999999999999998763 222 67799999999999999999999975333324799999
Q ss_pred ccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC-CCCcEEEeccCCccccCC--
Q 022956 100 EVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING-NIGQVKIGDLGFAAIVGR-- 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~-~~~~~~l~d~g~~~~~~~-- 175 (289)
||+++|||.+++...+ .++++.+..+++|+++||.|||++| ++|+||||+|||++. + +.+||+|||.+.....
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~-~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSN-GDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCC-CeEEeccCcccccccccc
Confidence 9999999999999866 7999999999999999999999999 999999999999999 6 8999999999987663
Q ss_pred --ccccccCCCCCCCCCCcccc-cC-CCCcchHHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 176 --SHAAHSIIGTPEYMAPELYE-ED-YTEMVDIYSFGLCLLEMVTMEIPYSE-CDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 176 --~~~~~~~~~~~~~~aPE~~~-~~-~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
........|++.|||||... +. ..+++|||||||++.||+||..||.. ................| .++...++.
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~ 251 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDE 251 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHH
Confidence 22344578999999999777 43 44599999999999999999999987 44455555555555333 667778999
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+++++.+|++ ||++|||++++|.|||.++...
T Consensus 252 a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 252 AKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 9999999998 9999999999999999987554
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-51 Score=347.64 Aligned_cols=264 Identities=30% Similarity=0.410 Sum_probs=224.1
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEe
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLD 89 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~ 89 (289)
++....|| ++.++||.|.||.||+|+.+.+|+.||||.++..... -++. .=.+|++.|++|+ ||||+++.+++.+
T Consensus 5 ~~~~m~RY-~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~--~nLREvksL~kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 5 QVIFMDRY-TVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEEC--MNLREVKSLRKLNPHPNIIKLKEVIRD 80 (538)
T ss_pred ehhHHHHH-HHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHH--HHHHHHHHHHhcCCCCcchhhHHHhhc
Confidence 44566777 6899999999999999999999999999999865432 1221 2357999999998 9999999999977
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccC
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLG 168 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g 168 (289)
..+ .+++||||++. +|.+++..+ +.+++..+..|+.||++||+|+|++| ++|||+||+|||+..+ ..+||+|||
T Consensus 81 ~~~-~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~-~~iKiaDFG 155 (538)
T KOG0661|consen 81 NDR-ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGN-DVIKIADFG 155 (538)
T ss_pred cCc-eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEeccc-ceeEecccc
Confidence 653 89999999987 999999864 67999999999999999999999999 9999999999999987 699999999
Q ss_pred CccccCCccccccCCCCCCCCCCccc-c-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CCCCC--
Q 022956 169 FAAIVGRSHAAHSIIGTPEYMAPELY-E-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VKPQA-- 242 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~-- 242 (289)
+|+.......-..+..|.+|.|||++ + +.|+.+.|||++|||++|+.+-+..|++..+.++++.++.-- +....
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 99998887777788899999999954 4 449999999999999999999999999988888887655432 21111
Q ss_pred -----------------------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 243 -----------------------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 243 -----------------------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.-...++++.+||.+|++ ||++|||+.|+|+||||..-...
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 111246788999999999 99999999999999999876554
No 14
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-50 Score=351.69 Aligned_cols=264 Identities=23% Similarity=0.432 Sum_probs=235.8
Q ss_pred eeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe
Q 022956 10 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD 89 (289)
Q Consensus 10 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 89 (289)
+..+..+-+ ++++.||.|+-|.|-+|+|-.||+..|||++..... ........+.+|+-+++.+.|||++.+++++
T Consensus 6 ~~~~tiGpw-kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~-~s~s~~~~IerEIviMkLi~HpnVl~LydVw-- 81 (786)
T KOG0588|consen 6 SHKNTIGPW-KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE-LSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-- 81 (786)
T ss_pred cccccccce-eccccccCCCCceehhhhcccccceeEEEeeccccc-cccccccchhhhhHHHHHhcCCCeeeeeeee--
Confidence 344566665 789999999999999999999999999999987632 2344567789999999999999999999999
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
+.+..+|+|.||++||-|++++-..+++++.++.++++||+.|+.|||..+ ++|+|+||+|+|+|.. +++||+|||+
T Consensus 82 e~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~-~nIKIADFGM 158 (786)
T KOG0588|consen 82 ENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVK-NNIKIADFGM 158 (786)
T ss_pred ccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcc-cCEeeeccce
Confidence 445789999999999999999999999999999999999999999999999 9999999999999999 6799999999
Q ss_pred ccccCCccccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
|..........+.||.|.|.|||+..|. -..++||||.|+|+|.|+||.+||++ ++...++..+.++.. .++..+
T Consensus 159 AsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~G~f--~MPs~I 235 (786)
T KOG0588|consen 159 ASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQRGVF--EMPSNI 235 (786)
T ss_pred eecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCcc--cCCCcC
Confidence 9988888888899999999999988876 45689999999999999999999986 777777777777653 356889
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
++++++||.+||. ||.+|+|.+||++|||+..-.-.
T Consensus 236 s~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 236 SSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred CHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence 9999999999999 99999999999999999887543
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.9e-49 Score=311.15 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=216.7
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
.+|.+ .++||+|.||.||+|.+.+||+.||||+++..... ........+|++.|+.++|+||+.++++|-. .+.+
T Consensus 2 ~rY~~-~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k--dGi~~talREIK~Lqel~h~nIi~LiD~F~~--~~~l 76 (318)
T KOG0659|consen 2 DRYEK-LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK--DGINRTALREIKLLQELKHPNIIELIDVFPH--KSNL 76 (318)
T ss_pred chhhh-hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc--cCccHHHHHHHHHHHHccCcchhhhhhhccC--CCce
Confidence 45644 89999999999999999999999999999987653 3334567889999999999999999999944 4679
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
.+|+||++. +|+..+.. ...++..++..++.+++.|++|||++. ++||||||.|+|++++ |.+|++|||+++.+.
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~-g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSD-GQLKIADFGLARFFG 152 (318)
T ss_pred EEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCC-CcEEeecccchhccC
Confidence 999999987 89999875 467899999999999999999999999 9999999999999999 999999999999887
Q ss_pred Ccccccc-CCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CCCCC-------
Q 022956 175 RSHAAHS-IIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VKPQA------- 242 (289)
Q Consensus 175 ~~~~~~~-~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~------- 242 (289)
.+..... ...|..|.|||++.|. |....||||.|||+.||+.+..-|++..+.+++..+.... +.+..
T Consensus 153 ~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 153 SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 6655433 4678899999977654 9999999999999999999998888877777665443332 11111
Q ss_pred ----------------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 243 ----------------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 243 ----------------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
.-...++.+-+|+.+||. ||.+|+++.|+|+|+||++...
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 112235677899999999 9999999999999999998643
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-49 Score=335.84 Aligned_cols=254 Identities=27% Similarity=0.354 Sum_probs=215.8
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
-.++||+|.||.||+|++..||+.||+|+++.... ++.....+.+|+++|++|.||||+++.+.........+|+|+|
T Consensus 121 ki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~--~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe 198 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE--KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE 198 (560)
T ss_pred HHHHhcCcchhheeEeeecccCcEEEEEEeecccC--CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence 36889999999999999999999999999998764 5666788899999999999999999999987765678999999
Q ss_pred cccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc--
Q 022956 101 VCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-- 177 (289)
Q Consensus 101 ~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-- 177 (289)
|++. .|..++.. +-.+++.++..++.|++.||+|||++| ++|||||.+|||+|.+ |.+||+|||+|.++....
T Consensus 199 YMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~-G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 199 YMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNN-GVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred cccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCC-CCEEeccccceeeccCCCCc
Confidence 9988 89998887 457999999999999999999999999 9999999999999999 999999999999876443
Q ss_pred ccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC--CCCCCCCC---------
Q 022956 178 AAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG--GVKPQALN--------- 244 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~--------- 244 (289)
...+.+.|..|.|||++-|. |+.+.|+||.|||+.||++|+..|.+....+++-.+..- .+....++
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 34556789999999977654 999999999999999999999999987665554332221 11111111
Q ss_pred ---------------CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 245 ---------------KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 245 ---------------~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
...++...+|+..||. ||.+|.|+.++|.++||+.-
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 1236678899999999 99999999999999999443
No 17
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-49 Score=324.07 Aligned_cols=268 Identities=27% Similarity=0.421 Sum_probs=224.7
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe---C
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD---D 90 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~ 90 (289)
...+| ...+.||.|+||.|+.+.++.||+.||||++..... +....++..+|++.|+.++|+||+.+.+++.. +
T Consensus 20 i~~~y-~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~--~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 20 IPRYY-VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE--NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred cccee-cccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh--chHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 34444 447999999999999999999999999999974432 56778899999999999999999999998865 3
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+-+.+|+|+|+++. .|...+.++..|++..+..+++|++.||.|+|+.+ ++||||||.|++++.+ -.+|+||||+|
T Consensus 97 ~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~-c~lKI~DFGLA 172 (359)
T KOG0660|consen 97 KFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNAD-CDLKICDFGLA 172 (359)
T ss_pred ccceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccC-CCEEeccccce
Confidence 34679999999965 99999999888999999999999999999999999 9999999999999999 79999999999
Q ss_pred cccCC---ccccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-----
Q 022956 171 AIVGR---SHAAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP----- 240 (289)
Q Consensus 171 ~~~~~---~~~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----- 240 (289)
+.... .........|..|.|||++- ..|+.+.||||.|||+.||++|+..|.+.+...++..++.-...+
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 88754 22334566788999999654 449999999999999999999999998866555544322221111
Q ss_pred -----------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCC
Q 022956 241 -----------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPS 288 (289)
Q Consensus 241 -----------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~ 288 (289)
...-...++.+.+|+++||. ||.+|+|++|+|+||||+.+..++.+|.
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~ 324 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPV 324 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCC
Confidence 01122457889999999999 9999999999999999999988888774
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-49 Score=342.68 Aligned_cols=258 Identities=30% Similarity=0.522 Sum_probs=232.3
Q ss_pred eCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 12 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 12 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
.++..+|. -.++||+|+.|.||.|....+++.||||.+....... .+-+.+|+.+++..+|+|||..++.|+..
T Consensus 269 ~dP~~~y~-~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~----keLilnEi~Vm~~~~H~NiVnfl~Sylv~- 342 (550)
T KOG0578|consen 269 GDPRSKYT-DFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK----KELLLNEILVMRDLHHPNIVNFLDSYLVG- 342 (550)
T ss_pred CChhhhhc-chhhhccccccceeeeeeccCCceEEEEEEEeccCCc----hhhhHHHHHHHHhccchHHHHHHHHhccc-
Confidence 46677774 5899999999999999999999999999998865432 56788999999999999999999998765
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
+.+|.||||++||+|.+.+.... ++|.++..+.++++.||+|||.+| ++|+|||.+|||++.+ |.+||+|||++.
T Consensus 343 -deLWVVMEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~-g~vKltDFGFca 417 (550)
T KOG0578|consen 343 -DELWVVMEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMD-GSVKLTDFGFCA 417 (550)
T ss_pred -ceeEEEEeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccC-CcEEEeeeeeee
Confidence 56999999999999999998755 999999999999999999999999 9999999999999999 999999999998
Q ss_pred ccCCcc-ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 172 IVGRSH-AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
.+.... +.....|||.|||||.... .|.++.||||||++++||+-|+.||-.......++.+-..+.+....+...++
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~ 497 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSP 497 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCH
Confidence 876544 5667789999999997665 59999999999999999999999999877788888777778888888899999
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.+++|+.+||+ |+++|+++.++|+||||+-.
T Consensus 498 ~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 498 ELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred HHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999999 99999999999999999543
No 19
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-48 Score=334.77 Aligned_cols=259 Identities=23% Similarity=0.372 Sum_probs=221.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|+||.||+|+.+.||+.||+|+++..... .....+.++.|-.+|....+|.+|+++..|.+ ..++||||
T Consensus 144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~-~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--~~~LYLiM 220 (550)
T KOG0605|consen 144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML-KKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--KEYLYLIM 220 (550)
T ss_pred hhheeeccccceeEEEEEEccCCcEEeeecccHHHHH-hhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC--CCeeEEEE
Confidence 5789999999999999999999999999999987653 34457778999999999999999999999844 47899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC----
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR---- 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~---- 175 (289)
||++||.+..++...+.|++..+...+.+++.|+..+|+.| ++|+||||+|+|+|.. |++||+|||++.....
T Consensus 221 EylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~-GHiKLSDFGLs~gl~~~~~~ 297 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAK-GHIKLSDFGLSTGLDKKHRI 297 (550)
T ss_pred EecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCC-CCEeeccccccchhhhhhhh
Confidence 99999999999999999999999999999999999999999 9999999999999999 9999999999854310
Q ss_pred --------------------cc-----c-------------------cccCCCCCCCCCCcccccC-CCCcchHHHHHHH
Q 022956 176 --------------------SH-----A-------------------AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLC 210 (289)
Q Consensus 176 --------------------~~-----~-------------------~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~i 210 (289)
.. . ..+..|||.|+|||++.+. +....|.||||||
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI 377 (550)
T ss_pred hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence 00 0 0124689999999976654 9999999999999
Q ss_pred HHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-CCCCCCChHHHHHHHHHHcCCCCCC---CHHHHhcCcccccCCCCC
Q 022956 211 LLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ-ALNKVKDPEVKAFIEKCIAQPRARP---SASELLKDPFFSELNDDD 284 (289)
Q Consensus 211 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~dp~~Rp---s~~~il~h~~~~~~~~~~ 284 (289)
+|||+.|..||.+.........++....... ......++++++||.+||.||++|. +++||-+||||++++|+.
T Consensus 378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG~~G~~EIK~HPfF~~v~W~~ 455 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLGSKGAEEIKKHPFFKGVDWDH 455 (550)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcCcccHHHHhcCCccccCCcch
Confidence 9999999999998766666655554432221 1233457999999999999999995 699999999999999975
No 20
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.7e-48 Score=335.99 Aligned_cols=252 Identities=23% Similarity=0.430 Sum_probs=212.1
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||.||+|.++.+|+.||+|+++..... .......+.+|+.++++++||||+++++.+... +.+++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~e~~ 77 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--DRLCFVMEYA 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--CEEEEEEeCC
Confidence 4699999999999999999999999999864322 233456678899999999999999999887443 6899999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHS 181 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~ 181 (289)
++++|.+++...+.+++.++..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... ......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 78 NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEeeCCCCcccccCCCcccc
Confidence 99999999998888999999999999999999999999 9999999999999988 8999999999875422 222334
Q ss_pred CCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc
Q 022956 182 IIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 260 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 260 (289)
.++++.|+|||.+.+. ++.++|||||||++|+|++|..||....... ....+.... ...+...++.+.+|+.+||+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~~~~~~--~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELILMEE--IRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-HHHHHHcCC--CCCCCCCCHHHHHHHHHHcc
Confidence 5689999999977654 8999999999999999999999998754443 333333322 22345578999999999998
Q ss_pred -CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 261 -QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 261 -dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
||++|| ++.++++||||++++|.
T Consensus 232 ~dP~~R~~~~~~~~~~ll~h~~f~~~~~~ 260 (323)
T cd05571 232 KDPKQRLGGGPEDAKEIMEHRFFASINWQ 260 (323)
T ss_pred CCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 999999 89999999999987654
No 21
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-48 Score=331.16 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=214.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||+|.++.+|+.||+|++...... .....+.+.+|++++++++||||+++++.+.+ .+.+++||
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~ 80 (291)
T cd05612 4 ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--QRFLYMLM 80 (291)
T ss_pred eeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--CCeEEEEE
Confidence 6789999999999999999999999999999764321 22345678899999999999999999987744 36899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+++++|.+++...+.+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++...... .
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~-~~~kl~Dfg~~~~~~~~--~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKE-GHIKLTDFGFAKKLRDR--T 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEEecCcchhccCC--c
Confidence 99999999999998888999999999999999999999999 9999999999999988 89999999998765432 2
Q ss_pred ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
....+++.|+|||.+.+. ++.++|||||||++|+|++|..||.+............... ..+...++.+++|+.+|
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL---EFPRHLDLYAKDLIKKL 232 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---CCCccCCHHHHHHHHHH
Confidence 235688999999976654 88999999999999999999999987655444444333322 23444588999999999
Q ss_pred Hc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 259 IA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 259 l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
|+ ||.+||+ ++++++||||+.+++.
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 98 9999995 9999999999987765
No 22
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-50 Score=313.93 Aligned_cols=261 Identities=26% Similarity=0.452 Sum_probs=225.5
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
-.++.| .+.+.||+|.|+.|+++.+..||+.+|+|++....+... .-+.+.+|+++.+.|+||||+.+...+ ++.
T Consensus 8 ~f~d~y-~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l~rEarIC~~LqHP~IvrL~~ti--~~~ 82 (355)
T KOG0033|consen 8 KFSDNY-DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICRKLQHPNIVRLHDSI--QEE 82 (355)
T ss_pred ccchhh-hHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHHHHHHHHHHhcCCCcEeehhhhh--ccc
Confidence 345566 578999999999999999999999999999988776433 567899999999999999999999988 444
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--CCcEEEeccCCc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--IGQVKIGDLGFA 170 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~~~~~l~d~g~~ 170 (289)
.+.|+|+|++.|+.|..-+-+.-..++..+...++||++||.|+|.+| ++|+|++|.|+++... .--+||+|||++
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceE
Confidence 789999999999999887777677899999999999999999999999 9999999999999543 246999999999
Q ss_pred cccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC-CC-CCCCCCCC
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG-VK-PQALNKVK 247 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 247 (289)
...+.........|+|.|+|||+++++ ++.++|||+-|+|+|-++.|.+||.+.+. ..+++.+.++ .. +...+..+
T Consensus 161 i~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-~rlye~I~~g~yd~~~~~w~~i 239 (355)
T KOG0033|consen 161 IEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYEQIKAGAYDYPSPEWDTV 239 (355)
T ss_pred EEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-HHHHHHHhccccCCCCcccCcC
Confidence 999877777888999999999988866 89999999999999999999999988444 4445555544 32 22256678
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+++.++|+++||. ||.+|+|+.+.|.|||+++-+
T Consensus 240 s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 240 TPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred CHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 9999999999998 999999999999999998754
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-48 Score=323.98 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=224.2
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
++.+-|.+.+.||.|..++||+|..+.+++.||||++...... ...+.+.+|+..++.++||||+..+..|..+ .
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~--~ 97 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVD--S 97 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEec--c
Confidence 4555568999999999999999999999999999999977652 2378899999999999999999999999766 5
Q ss_pred eeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 94 TLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.+|+||+|+.+||+.+++... ..+++..+..++++++.||.|||++| .+|||||+.|||++.+ |.|||+|||.+.
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~d-G~VkLadFgvsa 174 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSD-GTVKLADFGVSA 174 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCC-CcEEEcCceeee
Confidence 799999999999999999863 45999999999999999999999999 9999999999999999 999999999986
Q ss_pred ccCCccc-----cccCCCCCCCCCCcccc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---
Q 022956 172 IVGRSHA-----AHSIIGTPEYMAPELYE---EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--- 240 (289)
Q Consensus 172 ~~~~~~~-----~~~~~~~~~~~aPE~~~---~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--- 240 (289)
....... +....+++.|||||.+. .+|+.++||||||++..|+.+|..||....+...+...+...++-
T Consensus 175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t 254 (516)
T KOG0582|consen 175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT 254 (516)
T ss_pred eecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccc
Confidence 5433221 13457899999999754 349999999999999999999999999988888877776655431
Q ss_pred ----CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 241 ----QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 241 ----~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.......+..++.++..||. ||.+|||++++|+|+||+.....
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 12222346689999999998 99999999999999999987543
No 24
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-48 Score=334.78 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=215.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||+|.++.+|+.||+|++...... .....+.+.+|++++++++||||+++++.+... +.+++||
T Consensus 21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~ 97 (329)
T PTZ00263 21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--NRVYFLL 97 (329)
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--CEEEEEE
Confidence 6789999999999999999999999999999864321 223456788999999999999999999988554 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+.+++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++...... .
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~--~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNK-GHVKVTDFGFAKKVPDR--T 172 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCC-CCEEEeeccCceEcCCC--c
Confidence 99999999999998888999999999999999999999999 9999999999999988 89999999999766433 2
Q ss_pred ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
....+++.|+|||.+.+. ++.++|+|||||++|+|++|..||.+...... ...+..+.. ..+...+..+++|+.+|
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~~~--~~p~~~~~~~~~li~~~ 249 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI-YEKILAGRL--KFPNWFDGRARDLVKGL 249 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH-HHHHhcCCc--CCCCCCCHHHHHHHHHH
Confidence 235689999999977654 88999999999999999999999987554433 333433322 23445788999999999
Q ss_pred Hc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 259 IA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 259 l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
|+ ||.+||+ +++++.||||++.+|+
T Consensus 250 L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 250 LQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred hhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 98 9999986 7999999999987655
No 25
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=329.63 Aligned_cols=245 Identities=32% Similarity=0.551 Sum_probs=212.0
Q ss_pred eeeeecccCcceEEEEeecCCCcE-EEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIE-VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~-~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+.+.||+|+||+||++.+. |.. +|+|++...... ....+.|.+|+.+|++++|||||++++++..... .+++||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~--~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVt 119 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFD--DESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVT 119 (362)
T ss_pred hhhhcccCCceeEEEEEeC--CceeEEEEEecchhcC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEE
Confidence 4667999999999999886 667 999999876542 2227899999999999999999999999865532 689999
Q ss_pred ccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC-cEEEeccCCccccCCc
Q 022956 100 EVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIVGRS 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~-~~~l~d~g~~~~~~~~ 176 (289)
||+++|+|.+++.. ...++...++.|+.+++.||.|||++++ ++|+|||++|||++.+ + ++||+|||++......
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~-~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLK-GKTLKIADFGLSREKVIS 197 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCC-CCEEEECCCccceeeccc
Confidence 99999999999987 6789999999999999999999999997 8999999999999999 6 9999999999877654
Q ss_pred -cccccCCCCCCCCCCcccccC---CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 -HAAHSIIGTPEYMAPELYEED---YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 -~~~~~~~~~~~~~aPE~~~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.......||+.|||||++.+. ++.++||||+|+++|||+||+.||.+.............+.++... ...++.+.
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p-~~~~~~l~ 276 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP-KECPPHLS 276 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC-ccCCHHHH
Confidence 333446899999999988843 9999999999999999999999999988755555665566555443 33899999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
.|++.||. ||++||++.+|+.
T Consensus 277 ~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 277 SLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHhCCCCCCcCCCHHHHHH
Confidence 99999998 9999999999987
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.5e-48 Score=335.83 Aligned_cols=252 Identities=25% Similarity=0.428 Sum_probs=222.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
-+.+.||+|+||+||+|+.+.|.+.||+|.+..... .+...+.+.+|+++++.++||||+..++.| +....+++|+
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esf--Et~~~~~vVt 80 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESF--ETSAHLWVVT 80 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhh--cccceEEEEe
Confidence 467899999999999999999999999999987654 566789999999999999999999999999 4447899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
||+.| +|..+++.++.++++++..++.++++||.|||+.+ +.|+|+||.||+++.+ |.+|+||||+++.......
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~-~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKG-GTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCC-CceeechhhhhhhcccCcee
Confidence 99988 99999999999999999999999999999999999 9999999999999999 9999999999997765433
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
..+..|||-|||||.+.+. ++..+|+||||||+||+++|+.||-. .......+.+.... ..++...+..+..+++.
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~d~--v~~p~~~S~~f~nfl~g 233 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILKDP--VKPPSTASSSFVNFLQG 233 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhcCC--CCCcccccHHHHHHHHH
Confidence 3445799999999987755 99999999999999999999999976 44455555555532 33455678999999999
Q ss_pred HHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 258 CIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+|. ||.+|.+-.+++.|||.++-..
T Consensus 234 LL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 234 LLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred HhhcChhhcccHHHHhcChHHhhhhh
Confidence 998 9999999999999999987643
No 27
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-47 Score=332.09 Aligned_cols=257 Identities=25% Similarity=0.367 Sum_probs=214.0
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
.| ++.++||+|+||.||+|.+..+|+.||+|+++..... .......+.+|++++..++||||+++++.+.. ++.++
T Consensus 2 ~y-~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~ 77 (333)
T cd05600 2 DF-QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--DEYLY 77 (333)
T ss_pred Cc-EEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--CCEEE
Confidence 44 6899999999999999999999999999999864321 23345678889999999999999999988754 36899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||||++|++|.+++.....+++.++..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 78 lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 78 LAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDAS-GHIKLTDFGLSKGIVT- 153 (333)
T ss_pred EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEEEeCcCCccccc-
Confidence 99999999999999998888999999999999999999999999 9999999999999988 8999999999976544
Q ss_pred cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC--C-C--CCCCCCCChH
Q 022956 177 HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--K-P--QALNKVKDPE 250 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~ 250 (289)
......+++.|+|||.+.+. ++.++|||||||++|+|++|..||................. . + .......++.
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~ 232 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDE 232 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHH
Confidence 23345689999999977654 89999999999999999999999987554433332222111 1 1 1111235889
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+.+++.+||+ +|++||+++++++||||++.++
T Consensus 233 ~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 233 AWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred HHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 9999999998 8999999999999999998755
No 28
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-47 Score=323.30 Aligned_cols=257 Identities=19% Similarity=0.340 Sum_probs=212.0
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|+||+||++.++.+|+.||+|.+...... .......+.+|+++++.++|++++.+.+.+... +.++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~--~~~~lv 78 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC--CeEEEE
Confidence 36789999999999999999999999999999765432 122234577899999999999999999887443 679999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDR-GHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeCCCcEEcCCC
Confidence 999999999888754 346899999999999999999999999 9999999999999988 89999999999876544
Q ss_pred cccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV---AKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.......++..|+|||.+.+ .++.++|||||||++|+|++|..||...... ......+.. .....+...++.+.
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~ 233 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAK 233 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHH
Confidence 33445578999999997765 4899999999999999999999999865432 222222222 12234445688999
Q ss_pred HHHHHHHc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 253 AFIEKCIA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
+|+.+||+ ||++||+ ++++++||||+++++.
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 234 SICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred HHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 99999998 9999997 8999999999998764
No 29
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.4e-48 Score=337.42 Aligned_cols=258 Identities=23% Similarity=0.408 Sum_probs=214.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||+||+|.++.+|+.||+|++...... .......+.+|+++++.++||||+++++.+... ..+++||
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~~lv~ 80 (364)
T cd05599 4 ESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEADNPWVVKLYYSFQDE--NYLYLIM 80 (364)
T ss_pred eEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CeEEEEE
Confidence 6789999999999999999999999999999865332 233456788899999999999999999888543 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc--
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-- 177 (289)
||+++++|.+++...+.+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAK-GHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEeecccceeccccccc
Confidence 99999999999988888999999999999999999999999 9999999999999998 899999999986542111
Q ss_pred -------------------------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCC
Q 022956 178 -------------------------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEI 219 (289)
Q Consensus 178 -------------------------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~ 219 (289)
.....+|++.|+|||.+.+. ++.++|||||||++|+|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 01123589999999976544 8999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHhCCCCCC-CCCCCCChHHHHHHHHHHcCCCCCCC---HHHHhcCcccccCCCC
Q 022956 220 PYSECDSVAKIYKKVTGGVKPQ-ALNKVKDPEVKAFIEKCIAQPRARPS---ASELLKDPFFSELNDD 283 (289)
Q Consensus 220 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~dp~~Rps---~~~il~h~~~~~~~~~ 283 (289)
||.................... ......++.+++||.+|+.+|.+|++ +++++.||||++.+|.
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~~~~~ 305 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVDWE 305 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 9987655544444433221111 11224688999999999999999987 9999999999998764
No 30
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.7e-47 Score=333.59 Aligned_cols=259 Identities=20% Similarity=0.372 Sum_probs=211.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||+||+|.++.+++.||+|++...... .......+.+|+.++..++|++|+++++.+.+. ..+++||
T Consensus 4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~--~~~~lv~ 80 (363)
T cd05628 4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-EKEQVGHIRAERDILVEADSLWVVKMFYSFQDK--LNLYLIM 80 (363)
T ss_pred eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC--CeEEEEE
Confidence 5789999999999999999999999999999754321 233456788899999999999999999887543 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
||++|++|.+++.+.+.+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~-~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSK-GHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CCEEEeeccCcccccccccc
Confidence 99999999999998888999999999999999999999999 9999999999999988 8999999999875422100
Q ss_pred -----------------------------------cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCC
Q 022956 179 -----------------------------------AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYS 222 (289)
Q Consensus 179 -----------------------------------~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~ 222 (289)
....+|++.|+|||.+.+. ++.++|+|||||++|+|++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 1234689999999976544 8999999999999999999999998
Q ss_pred CCCcHHHHHHHHhCCCCCCCC-CCCCChHHHHHHHHHHcC---CCCCCCHHHHhcCcccccCCCCC
Q 022956 223 ECDSVAKIYKKVTGGVKPQAL-NKVKDPEVKAFIEKCIAQ---PRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~d---p~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+.................... ....++.+++++.+|+.+ +..||++++|++||||++.+|..
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~~~ 303 (363)
T cd05628 238 SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWEH 303 (363)
T ss_pred CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCHHH
Confidence 755544444333322111111 223578999999997753 44568999999999999987754
No 31
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1e-47 Score=334.74 Aligned_cols=260 Identities=23% Similarity=0.392 Sum_probs=216.9
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.++||+|+||+||+|.++.+|+.||+|+++..... .......+.+|++++..++|+|++++++.+.+ ++.++
T Consensus 2 ~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~ 77 (350)
T cd05573 2 DF-EVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQD--EEHLY 77 (350)
T ss_pred Cc-eEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheec--CCeEE
Confidence 44 6899999999999999999999999999999865332 12345678899999999999999999988744 36899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||||+++++|.+++.....+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 78 LVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDAD-GHIKLADFGLCKKMNKA 154 (350)
T ss_pred EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEeecCCCCccCccc
Confidence 99999999999999998888999999999999999999999999 9999999999999998 89999999999766443
Q ss_pred c------------------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 022956 177 H------------------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD 225 (289)
Q Consensus 177 ~------------------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~ 225 (289)
. ......+++.|+|||.+.+. ++.++|||||||++|+|++|..||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 22335689999999977655 8999999999999999999999998766
Q ss_pred cHHHHHHHHhC-CCCCCCCCCCCChHHHHHHHHHHcCCCCCCC-HHHHhcCcccccCCCC
Q 022956 226 SVAKIYKKVTG-GVKPQALNKVKDPEVKAFIEKCIAQPRARPS-ASELLKDPFFSELNDD 283 (289)
Q Consensus 226 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~dp~~Rps-~~~il~h~~~~~~~~~ 283 (289)
........... ...........++.+.+||.+||.||.+||+ ++++++||||++.++.
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~~s~~~ll~hp~~~~~~~~ 294 (350)
T cd05573 235 LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGSFEEIKSHPFFKGIDWE 294 (350)
T ss_pred HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcCCCHHHHhcCCCcCCCCHH
Confidence 44444433331 1111111222589999999999999999999 9999999999998764
No 32
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-47 Score=328.35 Aligned_cols=252 Identities=23% Similarity=0.429 Sum_probs=211.6
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||.||++.++.+|..||+|+++..... .......+.+|+++++.++|||++++++.+... ..+++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~E~~ 77 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--DRLCFVMEYA 77 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CEEEEEEeCC
Confidence 4699999999999999999999999999864321 233456678899999999999999999887544 6799999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHS 181 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~ 181 (289)
++++|..++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... ......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 78 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCC-CCEEecccHHhccccCCCCcccc
Confidence 99999999988888999999999999999999999999 9999999999999988 8999999999875322 222334
Q ss_pred CCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc
Q 022956 182 IIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 260 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 260 (289)
..+++.|+|||.+.+ .++.++|+|||||++|+|++|..||................. ..+...++.+++++.+||+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---RFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcc
Confidence 568999999997764 489999999999999999999999987554444333333222 2344578999999999998
Q ss_pred -CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 261 -QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 261 -dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
||++|+ ++.++++||||.+..|.
T Consensus 232 ~dP~~R~~~~~~~~~~~l~h~~~~~~~~~ 260 (323)
T cd05595 232 KDPKQRLGGGPSDAKEVMEHRFFLSINWQ 260 (323)
T ss_pred CCHHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 999998 99999999999987653
No 33
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.5e-47 Score=328.40 Aligned_cols=252 Identities=23% Similarity=0.417 Sum_probs=211.2
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||.||++.++.+|..||+|++...... .......+.+|+++++.++||||+++.+.+... +.+++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~Ey~ 77 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII-AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--DRLCFVMEYV 77 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CEEEEEEeCC
Confidence 4699999999999999999999999999864322 234456788899999999999999999877443 6899999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHS 181 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~ 181 (289)
++++|.+++.....+++.++..++.|++.||.|||++| ++|+||||+||+++.+ +.+||+|||++..... ......
T Consensus 78 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 78 NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKD-GHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCC-CcEEEecCcCCccCCCccccccc
Confidence 99999999988888999999999999999999999999 9999999999999988 8999999999875422 222334
Q ss_pred CCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc
Q 022956 182 IIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 260 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 260 (289)
..+++.|+|||.+.+ .++.++|||||||++|+|++|..||........ ...+.... ...+...++.+.+|+.+||+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-~~~~~~~~--~~~p~~~~~~~~~li~~~L~ 231 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FELILMED--IKFPRTLSADAKSLLSGLLI 231 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-HHHhccCC--ccCCCCCCHHHHHHHHHHcC
Confidence 568999999997764 489999999999999999999999987544433 33333222 22345578999999999998
Q ss_pred -CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 261 -QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 261 -dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
||++|+ ++.++++||||++.+|.
T Consensus 232 ~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 260 (328)
T cd05593 232 KDPNKRLGGGPDDAKEIMRHSFFTGVNWQ 260 (328)
T ss_pred CCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 999997 89999999999987653
No 34
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-47 Score=329.27 Aligned_cols=254 Identities=22% Similarity=0.395 Sum_probs=214.3
Q ss_pred cceeeeecccCcceEEEEeecCCC-cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEG-IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
|++.+.||+|+||.||+|.++.++ ..||+|.+...... .....+.+.+|+.+++.++||||+++++.+... +.+++
T Consensus 32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~~~~l 108 (340)
T PTZ00426 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-KQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--SYLYL 108 (340)
T ss_pred cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--CEEEE
Confidence 367899999999999999876654 78999999764332 233456788999999999999999999988554 68999
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||||+.+++|.+++.....+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKD-GFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEecCCCCeecCCC-
Confidence 9999999999999998888999999999999999999999999 9999999999999988 89999999999765432
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.....+++.|+|||.+.+. ++.++|+|||||++|+|++|..||.+......... +.... ...+...++.++++++
T Consensus 185 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~-i~~~~--~~~p~~~~~~~~~li~ 260 (340)
T PTZ00426 185 -TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK-ILEGI--IYFPKFLDNNCKHLMK 260 (340)
T ss_pred -cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH-HhcCC--CCCCCCCCHHHHHHHH
Confidence 2345689999999977654 88999999999999999999999987555443333 33332 2234557889999999
Q ss_pred HHHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 257 KCIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 257 ~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
+||+ ||++|+ +++++++||||++++|.
T Consensus 261 ~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 261 KLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred HHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 9998 999995 89999999999998764
No 35
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-46 Score=326.50 Aligned_cols=262 Identities=26% Similarity=0.386 Sum_probs=208.8
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC---Cee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH---NTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~ 95 (289)
|++.++||+|+||.||+|.++.+|..||+|.+..... .......+.+|+++++.++||||+++++++..... ..+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc--cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 3689999999999999999999999999999874322 22334568899999999999999999988754322 358
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++||||+. ++|.+++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++.....
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANAD-CKLKICDFGLARVAFN 155 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEccCcccccccc
Confidence 99999996 489999988888999999999999999999999999 9999999999999998 8999999999975432
Q ss_pred ccc----cccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH----------------
Q 022956 176 SHA----AHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK---------------- 232 (289)
Q Consensus 176 ~~~----~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~---------------- 232 (289)
... .....+++.|+|||.+.+ .+++++|||||||++|+|++|+.||.+.........
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRV 235 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 211 233568899999997653 488999999999999999999999976443221110
Q ss_pred ----------HHhCCCCCC--CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 233 ----------KVTGGVKPQ--ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 233 ----------~~~~~~~~~--~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
.+....... ......++.+.+++.+||+ ||++||+++++++||||+++.....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~ 302 (338)
T cd07859 236 RNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVERE 302 (338)
T ss_pred hhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccc
Confidence 000000000 0011346788999999998 99999999999999999998765543
No 36
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-46 Score=324.71 Aligned_cols=262 Identities=25% Similarity=0.431 Sum_probs=229.4
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCee
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 95 (289)
.+|.+.+.||.|.||.||+++++.||+.+|+|++........ ...+.+.+|+++|+++. |||++.+.+.|.+. ..+
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--~~~ 111 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDVRREVAILQQLSGHPNIVQLKDAFEDP--DSV 111 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--CeE
Confidence 345789999999999999999999999999999987765432 24678999999999998 99999999999554 689
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC---CcEEEeccCCccc
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI---GQVKIGDLGFAAI 172 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~---~~~~l~d~g~~~~ 172 (289)
++|||++.||.|.+.+... .+++..+..++.|++.++.|||+.| ++|+|+||+|+++.... +.++++|||++..
T Consensus 112 ~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 9999999999999999876 4999999999999999999999999 99999999999995442 4799999999999
Q ss_pred cCCccccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-CCCCCCCCChH
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPE 250 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 250 (289)
..........+|++.|+|||.+. ..++...||||+|+++|.|++|..||.+................ ....+...+..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISES 268 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHH
Confidence 88766777889999999999887 56999999999999999999999999987766666666655432 33445667999
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+++++..||. ||.+|+++.++|+|||+++...+.
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence 9999999998 999999999999999999875544
No 37
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=9.8e-47 Score=322.32 Aligned_cols=260 Identities=22% Similarity=0.342 Sum_probs=206.5
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
.++| ++.++||+|+||.||+|.++.+++.||+|++...... .....+.+|+.+++.++|||++++++++... ..
T Consensus 4 ~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 77 (303)
T cd07869 4 ADSY-EKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTK--ET 77 (303)
T ss_pred cccc-eEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecC--Ce
Confidence 3455 6799999999999999999999999999999754321 1234567799999999999999999987544 57
Q ss_pred eEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 95 LNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.++||||+.+ +|.+++.. ...+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.+||+|||++...
T Consensus 78 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~ 153 (303)
T cd07869 78 LTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDT-GELKLADFGLARAK 153 (303)
T ss_pred EEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECCCCcceec
Confidence 9999999975 77777765 356899999999999999999999999 9999999999999988 89999999998755
Q ss_pred CCcc-ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC---CCCC-------
Q 022956 174 GRSH-AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG---GVKP------- 240 (289)
Q Consensus 174 ~~~~-~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~---~~~~------- 240 (289)
.... ......+++.|+|||.+.+ .++.++|+|||||++|+|++|..||.+..+.......+.. ....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 154 SVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred cCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence 3322 2234567899999997653 3788999999999999999999999876544333322211 0000
Q ss_pred -------CC-------------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 241 -------QA-------------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 241 -------~~-------------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
.. .....++.+.+|+.+||+ ||++|||++|+++||||+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~~ 298 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPRL 298 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChhh
Confidence 00 001134678899999999 999999999999999999986543
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.2e-47 Score=324.43 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=209.4
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|+||.||+|.++.+++.||+|++...... .......+.+|+.++++++||||+++++.+... +.+++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--EKLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--CeEEEEEcCCCC
Confidence 79999999999999999999999999754322 233456788899999999999999999887443 689999999999
Q ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccccCC
Q 022956 105 GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHSII 183 (289)
Q Consensus 105 ~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~~~ 183 (289)
++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... ........
T Consensus 78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 78 GELFHHLQREGRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQ-GHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCC-CcEEEEECcccccCccCCCcccccc
Confidence 999999988888999999999999999999999999 9999999999999988 8999999999875432 22233456
Q ss_pred CCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-C
Q 022956 184 GTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-Q 261 (289)
Q Consensus 184 ~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-d 261 (289)
+++.|+|||.+.+. ++.++|||||||++|+|++|..||.+........ .+... +...+...++.+++++.+||+ |
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYR-KILQE--PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHH-HHHcC--CCCCCCcCCHHHHHHHHHHcCCC
Confidence 89999999977654 8999999999999999999999998755444333 33332 223445678999999999998 9
Q ss_pred CCCCC---CHHHHhcCcccccCCC
Q 022956 262 PRARP---SASELLKDPFFSELND 282 (289)
Q Consensus 262 p~~Rp---s~~~il~h~~~~~~~~ 282 (289)
|++|| ++.+++.||||++..+
T Consensus 232 p~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 232 PTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred HHHcCCCCCHHHHHcCCCcCCCCH
Confidence 99997 5799999999998644
No 39
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.1e-47 Score=334.16 Aligned_cols=258 Identities=23% Similarity=0.353 Sum_probs=209.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||+||++.++.+|+.||+|++...... .....+.+.+|+++++.++||||+++++.+.+ +..+|+||
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv~ 80 (377)
T cd05629 4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF-KKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--AQYLYLIM 80 (377)
T ss_pred eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCeeEEEE
Confidence 6789999999999999999999999999999754321 23446678899999999999999999988854 36899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc--
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-- 177 (289)
||++|++|.+++...+.+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~-~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRG-GHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEEeeccccccccccccc
Confidence 99999999999988888999999999999999999999999 9999999999999988 899999999985321100
Q ss_pred ----------------------------------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHH
Q 022956 178 ----------------------------------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLC 210 (289)
Q Consensus 178 ----------------------------------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~i 210 (289)
......|++.|+|||.+.+. ++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 00123588999999976544 8999999999999
Q ss_pred HHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC-CCCCCChHHHHHHHHHHcCCCC---CCCHHHHhcCcccccCCCC
Q 022956 211 LLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-LNKVKDPEVKAFIEKCIAQPRA---RPSASELLKDPFFSELNDD 283 (289)
Q Consensus 211 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~dp~~---Rps~~~il~h~~~~~~~~~ 283 (289)
+|+|++|..||..................... .....+..+++|+.+||++|.+ |+++.+++.||||++.+++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~~~~~ 314 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRGVDWD 314 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 99999999999875554443333322111111 1124678999999999986555 5699999999999987653
No 40
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-47 Score=314.95 Aligned_cols=254 Identities=28% Similarity=0.415 Sum_probs=215.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC---ee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN---TL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~---~~ 95 (289)
+.-.+++|+|+||.||+|+..++++.+|||++-..... -.+|+++++.++|||||.+..+|.....+ +.
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 34568999999999999999999999999999765432 23489999999999999999888765444 66
Q ss_pred EEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 96 NFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.+|+||++. +|...+.. +..++...+.-+++|++.||.|||+.| ++||||||+|+|+|++.|.+||||||.|.
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 779999987 89888874 577899999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCccccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---------
Q 022956 172 IVGRSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--------- 240 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 240 (289)
........-++..+.-|.|||.+.+- |+.+.||||.||++.||+-|+.-|++.+..+++..++.-...|
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 98877777777888899999966543 9999999999999999999999999876666655443322111
Q ss_pred -----------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 241 -----------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 241 -----------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.......++++.+|+.++|+ +|.+|.++.|+|.||||+.+..+
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 11334568899999999999 99999999999999999998665
No 41
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.2e-46 Score=331.50 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=212.5
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+.+.+.||+|+||+||+|.++.+++.||+|++...... .......+.+|+++++.++|+||+++++.+.+. ..+++|
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~--~~~~lv 79 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDK--DNLYFV 79 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC--CEEEEE
Confidence 36789999999999999999999999999999864432 234466789999999999999999999988544 679999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
|||++|++|.+++.....+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~-~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLD-GHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCC-CCEEEeeCcCCcccccccc
Confidence 999999999999998888999999999999999999999999 9999999999999988 899999999875321000
Q ss_pred -----------------------------------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHH
Q 022956 178 -----------------------------------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGL 209 (289)
Q Consensus 178 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~ 209 (289)
......|++.|+|||.+.+. ++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 01234689999999976644 899999999999
Q ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-CCCCCCCCChHHHHHHHHHHc---CCCCCCCHHHHhcCcccccCCCCC
Q 022956 210 CLLEMVTMEIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPEVKAFIEKCIA---QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 210 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~---dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
++|+|++|..||............+..... ........++++.+|+.+|+. ++..|+++++++.||||++.+|..
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCChhH
Confidence 999999999999876555444444332211 111223468899999999763 566699999999999999887643
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.9e-46 Score=321.28 Aligned_cols=256 Identities=28% Similarity=0.479 Sum_probs=212.8
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.+.||+|+||.||++.+..+|..+|+|.+.... .......+.+|++++++++|||++++++.+... +.+
T Consensus 5 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (331)
T cd06649 5 DDF-ERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEI 78 (331)
T ss_pred ccc-eEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEE
Confidence 455 67899999999999999999999999999997542 345567899999999999999999999988654 579
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. + ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI 155 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCC-CcEEEccCccccccc
Confidence 99999999999999999888899999999999999999999985 6 9999999999999988 899999999987654
Q ss_pred CccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH-------------------
Q 022956 175 RSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV------------------- 234 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~------------------- 234 (289)
.. ......+++.|+|||.+.+. ++.++|+|||||++|+|++|+.||....... ....+
T Consensus 156 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 156 DS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred cc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhcccccccccCCccccCccc
Confidence 32 23345688999999977654 8999999999999999999999997543221 11111
Q ss_pred ---------------------------hCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 235 ---------------------------TGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 235 ---------------------------~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
.....+.......++.+++|+.+||+ ||++|||++++++||||+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence 11111222233467899999999998 9999999999999999987654
No 43
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-48 Score=305.43 Aligned_cols=259 Identities=26% Similarity=0.452 Sum_probs=224.1
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC----HHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED----PVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDD 90 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 90 (289)
.+|+. .+.||.|..++|-++.++.+|..+|+|++......+. .+..+.-.+|+.+|+++ .||+|+.+.++| +
T Consensus 17 ~~y~p-keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y--e 93 (411)
T KOG0599|consen 17 AKYEP-KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY--E 93 (411)
T ss_pred hhcCh-HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec--c
Confidence 34543 7889999999999999999999999999988654332 34556678899999998 699999999999 4
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
++.++++|+|.++.|.|+|++.+.-.+|+.....+++|+..|++|||.++ ++|+||||+|||++++ .+++|+|||++
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn-~~i~isDFGFa 170 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDN-MNIKISDFGFA 170 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccc-cceEEecccee
Confidence 45789999999999999999999888999999999999999999999999 9999999999999999 89999999999
Q ss_pred cccCCccccccCCCCCCCCCCccccc-------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-CC
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYEE-------DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-QA 242 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~ 242 (289)
.......+....||||+|+|||.+.. +|+...|+|++|+|+|.++.|..||-...+...+..+..++..- ..
T Consensus 171 ~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp 250 (411)
T KOG0599|consen 171 CQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP 250 (411)
T ss_pred eccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc
Confidence 99999989999999999999997653 37778999999999999999999998755555555555444221 12
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
-+...+...++||.+||+ ||.+|.|++++|+||||..+
T Consensus 251 eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 251 EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 244568889999999999 99999999999999999655
No 44
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.4e-46 Score=318.78 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=205.5
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.+.||+|+||+||++.++.+++.||+|+++.... .....+.+.+|+.+++.++||||+++++.+... ..++
T Consensus 2 ~y-~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 76 (287)
T cd07848 2 KF-EVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRR--GKLY 76 (287)
T ss_pred Cc-eEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecC--CEEE
Confidence 44 689999999999999999999999999999986533 234456788899999999999999999887443 6899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||||++++++..+......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 77 LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHN-DVLKLCDFGFARNLSEG 153 (287)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccCccccccc
Confidence 99999999777766665667999999999999999999999999 9999999999999988 89999999999876432
Q ss_pred c--ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC--CCC------------
Q 022956 177 H--AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG--GVK------------ 239 (289)
Q Consensus 177 ~--~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~------------ 239 (289)
. ......+++.|+|||.+.+ .++.++|+|||||++|+|++|+.||.+....+........ ..+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 2 1223467889999997654 4889999999999999999999999875543332221110 000
Q ss_pred ------CC---------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 ------PQ---------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 ------~~---------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+. ......+..+.+|+.+||+ ||++|||++++|+||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00 0112357789999999999 99999999999999998
No 45
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8.7e-47 Score=326.14 Aligned_cols=253 Identities=19% Similarity=0.391 Sum_probs=210.1
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
++||+|+||.||+|.++.+++.||+|+++..... .....+.+.+|..++..+ +||||+++++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--~~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--SRLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--CEEEEEEeC
Confidence 4699999999999999999999999999865432 334456788899999888 699999999887544 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~~~~ 180 (289)
+++++|.+++...+.+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++... .......
T Consensus 78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEECcCccccccccCCCccc
Confidence 999999999988888999999999999999999999999 9999999999999988 89999999998643 2222334
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCC--------CcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSEC--------DSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||... .......+.+.... ...+...++.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~ 232 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--CCCCCCCCHHH
Confidence 45789999999977654 889999999999999999999999631 11222333333332 22445678899
Q ss_pred HHHHHHHHc-CCCCCCC------HHHHhcCcccccCCCC
Q 022956 252 KAFIEKCIA-QPRARPS------ASELLKDPFFSELNDD 283 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps------~~~il~h~~~~~~~~~ 283 (289)
.+++.+||+ ||.+|++ ++++++||||.+.+|+
T Consensus 233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~ 271 (329)
T cd05588 233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWD 271 (329)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 999999998 9999987 7899999999988764
No 46
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.3e-47 Score=325.09 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=209.9
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||+||+|.++.+++.||+|+++..... .....+.+..|..++..+ +|||++++++.+... +.+++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--~~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--DRLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--CEEEEEEcC
Confidence 4699999999999999999999999999864322 223355667788888776 699999999887443 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Cccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~~ 180 (289)
+++++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.... ......
T Consensus 78 ~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 78 VNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHE-GHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeeCCCCeecCcCCCccc
Confidence 999999999998888999999999999999999999999 9999999999999998 899999999987542 222333
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. +++++|+|||||++|+|++|+.||....... ....+.... ...+...++.+++++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~~--~~~~~~~~~~~~~li~~~L 231 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDE--VVYPTWLSQDAVDILKAFM 231 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCC--CCCCCCCCHHHHHHHHHHc
Confidence 45689999999977654 8899999999999999999999998755443 344444332 2234457899999999999
Q ss_pred c-CCCCCCCH------HHHhcCcccccCCCC
Q 022956 260 A-QPRARPSA------SELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps~------~~il~h~~~~~~~~~ 283 (289)
+ ||++||++ ++++.||||++++|.
T Consensus 232 ~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~ 262 (320)
T cd05590 232 TKNPTMRLGSLTLGGEEAILRHPFFKELDWE 262 (320)
T ss_pred ccCHHHCCCCCCCCCHHHHHcCCCcCCCCHH
Confidence 8 99999998 999999999998763
No 47
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1e-46 Score=332.17 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=213.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||+|+||+||+|.++.+++.||+|++...... .......+.+|+++++.++|+||+++++.+.+. +.+++||
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~--~~~~lv~ 80 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-LRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNLYFVM 80 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC--CEEEEEE
Confidence 5789999999999999999999999999999754321 234466788999999999999999999988554 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc---
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--- 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~--- 176 (289)
||+++++|.+++...+.+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~-g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEEeECCCCccccccccc
Confidence 99999999999988788999999999999999999999999 9999999999999988 89999999997432100
Q ss_pred ---------------------------------------------cccccCCCCCCCCCCccccc-CCCCcchHHHHHHH
Q 022956 177 ---------------------------------------------HAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLC 210 (289)
Q Consensus 177 ---------------------------------------------~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~i 210 (289)
.......|++.|+|||.+.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00112468899999997654 48999999999999
Q ss_pred HHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-CCCCCCChHHHHHHHHHHcCCCCCCC---HHHHhcCcccccCCCCC
Q 022956 211 LLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ-ALNKVKDPEVKAFIEKCIAQPRARPS---ASELLKDPFFSELNDDD 284 (289)
Q Consensus 211 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~dp~~Rps---~~~il~h~~~~~~~~~~ 284 (289)
+|+|++|..||............+....... ......++++.+++.+|+.+|++|++ +++++.||||+..++..
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~~~ 315 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSS 315 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCCcChHH
Confidence 9999999999987665554444443222211 12244688999999998789999987 99999999999987653
No 48
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-47 Score=333.92 Aligned_cols=255 Identities=26% Similarity=0.427 Sum_probs=220.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.++||.|+||+|+++..+.+++.||||+++.....+ .+..+....|.+++.... ||.++.++..|.+. .++++|
T Consensus 371 ~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~--~~l~fv 447 (694)
T KOG0694|consen 371 RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELANRHPFLVNLFSCFQTK--EHLFFV 447 (694)
T ss_pred EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhccCCeEeecccccccC--CeEEEE
Confidence 67899999999999999999999999999999877543 344677788888888775 99999999999554 689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCcc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~ 177 (289)
|||+.||++..+. +.+.+++..+..++..++.||+|||++| |++||||.+|||+|.+ |.+||+|||+++.. ....
T Consensus 448 mey~~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m~~g~ 523 (694)
T KOG0694|consen 448 MEYVAGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTE-GHVKIADFGLCKEGMGQGD 523 (694)
T ss_pred EEecCCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEccc-CcEEecccccccccCCCCC
Confidence 9999999954433 3467999999999999999999999999 9999999999999999 99999999999765 3666
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.+.+.||||.|+|||++.+. |+.+.|.||||++||+|+.|+.||.+.+.++..-+++... ..++...+.+...+++
T Consensus 524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~---~~yP~~ls~ea~~il~ 600 (694)
T KOG0694|consen 524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE---VRYPRFLSKEAIAIMR 600 (694)
T ss_pred ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---CCCCCcccHHHHHHHH
Confidence 78889999999999988766 9999999999999999999999999855555544444433 3466778999999999
Q ss_pred HHHc-CCCCCCC-----HHHHhcCcccccCCCCC
Q 022956 257 KCIA-QPRARPS-----ASELLKDPFFSELNDDD 284 (289)
Q Consensus 257 ~~l~-dp~~Rps-----~~~il~h~~~~~~~~~~ 284 (289)
++|. +|++|.. +++|..||||+.++|+.
T Consensus 601 ~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 601 RLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred HHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 9998 9999963 69999999999999863
No 49
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=328.05 Aligned_cols=259 Identities=29% Similarity=0.529 Sum_probs=227.9
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.+.+...|.+ .+.||.|+||.||+|.+..+++.||+|++.... .+..++.+.+|+.+|..++++||.+.++.|+..
T Consensus 8 ~~~~~~~~~~-~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~---~~deIediqqei~~Ls~~~~~~it~yygsyl~g 83 (467)
T KOG0201|consen 8 KIDPELLYTK-LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE---AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG 83 (467)
T ss_pred cCCccccccc-chhccccccceeeeeeeccccceEEEEEechhh---cchhhHHHHHHHHHHHhcCcchHHhhhhheeec
Confidence 4456667754 699999999999999999999999999998765 456688899999999999999999999999776
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
..++++||||.||++.+.++.+..+.+..+..++++++.|+.|||..+ .+|+|||+.||++..+ |.+||+|||.+
T Consensus 84 --~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~-g~vkl~DfgVa 158 (467)
T KOG0201|consen 84 --TKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSES-GDVKLADFGVA 158 (467)
T ss_pred --ccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEecc-CcEEEEeccee
Confidence 579999999999999999999887899999999999999999999999 9999999999999999 99999999999
Q ss_pred cccCCccc-cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 171 AIVGRSHA-AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 171 ~~~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
.+...... .....|||-|||||+..+ .|+.++||||||++.+||++|..|+....+....+.+ .+..+| ......+
T Consensus 159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-pk~~PP-~L~~~~S 236 (467)
T KOG0201|consen 159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-PKSAPP-RLDGDFS 236 (467)
T ss_pred eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-cCCCCC-ccccccC
Confidence 88765433 367889999999997766 5999999999999999999999999987775554443 343333 3344779
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+.+++|++.||+ ||+.||++.++|+|+|++..
T Consensus 237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 237 PPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 999999999998 99999999999999999983
No 50
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.5e-46 Score=323.90 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=210.6
Q ss_pred eeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++||+|+||.||++.+. .+++.||+|+++.............+.+|+.+++.++||||+++++.+... +.+++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEEEE
Confidence 67999999999999863 468999999998654333334456678899999999999999999887544 6799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~ 178 (289)
||+++++|.+++...+.+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... ...
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQ-GHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEeeCcCCeecccCCCc
Confidence 99999999999998888999999999999999999999999 9999999999999988 8999999999865432 222
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....+++.|+|||.+.+. ++.++||||||+++|+|++|..||............ ..+. ...+...++.+.+++.+
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~li~~ 233 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI-LKGK--LNLPPYLTPEARDLLKK 233 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCC--CCCCCCCCHHHHHHHHH
Confidence 3345689999999977654 888999999999999999999999875554443333 3332 22345568899999999
Q ss_pred HHc-CCCCCC-----CHHHHhcCcccccCCC
Q 022956 258 CIA-QPRARP-----SASELLKDPFFSELND 282 (289)
Q Consensus 258 ~l~-dp~~Rp-----s~~~il~h~~~~~~~~ 282 (289)
||+ ||++|| ++++++.||||+...+
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 998 999999 8999999999987654
No 51
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-46 Score=324.34 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=205.5
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||+||+|.++.+|+.||+|++..............+.++..+++.++||||+++++.+... +.+++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--DKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--CEEEEEEcCC
Confidence 46999999999999999999999999997654322222222333334456889999999999887543 6899999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHS 181 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~ 181 (289)
.+++|..++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... ......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeccCCCcccccCCCcccc
Confidence 99999999998888999999999999999999999999 9999999999999988 8999999999875422 222334
Q ss_pred CCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc
Q 022956 182 IIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 260 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 260 (289)
..+++.|+|||.+.+. ++.++|+|||||++|+|++|..||....... ....+.... .......++.+.+++.+||+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-MYDNILNKP--LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-HHHHHHcCC--CCCCCCCCHHHHHHHHHHhh
Confidence 5689999999977654 8899999999999999999999998754443 333333322 22344568999999999998
Q ss_pred -CCCCCCCH----HHHhcCcccccCCC
Q 022956 261 -QPRARPSA----SELLKDPFFSELND 282 (289)
Q Consensus 261 -dp~~Rps~----~~il~h~~~~~~~~ 282 (289)
||.+||++ .+++.||||+..+|
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 99999987 69999999998765
No 52
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.5e-47 Score=332.38 Aligned_cols=258 Identities=21% Similarity=0.342 Sum_probs=211.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||.||+|.++.+++.||+|++...... .......+.+|+++++.++|+||+++++.+.. ++.+++||
T Consensus 4 ~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv~ 80 (376)
T cd05598 4 VKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL-MRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFVM 80 (376)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEEE
Confidence 6899999999999999999999999999999754321 12235668889999999999999999988854 36899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc---
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--- 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~--- 176 (289)
||+++++|.+++...+.+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++......
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~-~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCC-CCEEEEeCCCCccccccccc
Confidence 99999999999998888999999999999999999999999 9999999999999988 89999999997432100
Q ss_pred -----------------------------------------cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHH
Q 022956 177 -----------------------------------------HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEM 214 (289)
Q Consensus 177 -----------------------------------------~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l 214 (289)
.......|++.|+|||.+.+. ++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 001124689999999977654 89999999999999999
Q ss_pred HhCCCCCCCCCcHHHHHHHHhCCCC-CCCCCCCCChHHHHHHHHHHcCCCCCC---CHHHHhcCcccccCCCC
Q 022956 215 VTMEIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPEVKAFIEKCIAQPRARP---SASELLKDPFFSELNDD 283 (289)
Q Consensus 215 ~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~dp~~Rp---s~~~il~h~~~~~~~~~ 283 (289)
++|..||.+................ ........++.+.+++.+|+.+|.+|+ ++.+++.||||+.+++.
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~~~~~ 310 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKGIDFA 310 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCCCCHH
Confidence 9999999876554444333322211 111223468899999999878999999 99999999999987543
No 53
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-46 Score=305.82 Aligned_cols=256 Identities=22% Similarity=0.304 Sum_probs=216.3
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
....|++|+||.||+|+++.|++.||+|.++.... .+.+--.-.+|+.+|.+++|||||.+-.+.+..+-+.+|+|||
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe 157 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--KEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVME 157 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccc--cCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHH
Confidence 46789999999999999999999999999998653 3334445678999999999999999999998877788999999
Q ss_pred cccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 101 VCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+. .|..++.+.+ +++..++..++.|++.|++|||.+. ++|||||++|+|++.. |.+|++|||+|+.++.+...
T Consensus 158 ~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~-G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 158 YVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHK-GILKIADFGLAREYGSPLKP 233 (419)
T ss_pred HHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccC-CcEEecccchhhhhcCCccc
Confidence 9988 8999998754 8999999999999999999999999 9999999999999988 99999999999999877554
Q ss_pred -ccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CCCCCC-----------
Q 022956 180 -HSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VKPQAL----------- 243 (289)
Q Consensus 180 -~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~----------- 243 (289)
...+-|..|.|||++-+. |+.+.|+||+|||+.+++++...|++....+++..+..-- +....+
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~ 313 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK 313 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence 345679999999966543 9999999999999999999999999877666655433221 110000
Q ss_pred ---------------CC-CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 244 ---------------NK-VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 244 ---------------~~-~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
.. ..++...+|+..+|. ||.+|.|++|.|.|.||.+...
T Consensus 314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 00 134677899999999 9999999999999999998543
No 54
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.2e-46 Score=333.79 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=206.9
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC----
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD---- 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 90 (289)
..+| ++.++||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++|||++++++++...
T Consensus 65 ~~~y-~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 65 NKSY-KLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CCeE-EEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 3444 78999999999999999999999999999886431 2234699999999999999998876432
Q ss_pred --CCCeeEEEeccccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 91 --QHNTLNFITEVCTSGNLRTYRK----KHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 91 --~~~~~~lv~e~~~~~sL~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
...++++||||+++ +|.+++. ....+++..+..++.|++.||.|||++| ++||||||+||+++.+.+.+||
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceee
Confidence 22357899999986 7776664 3567999999999999999999999999 9999999999999977457999
Q ss_pred eccCCccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--
Q 022956 165 GDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-- 240 (289)
Q Consensus 165 ~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-- 240 (289)
+|||++.............+++.|+|||.+.+ .++.++|||||||++|+|++|..||.+....+.....+.....+
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999987655444445678899999997654 48999999999999999999999998765555444433211000
Q ss_pred ------------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 241 ------------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 241 ------------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
...+...++++.+||.+||+ ||.+|||+.|+|+||||+.+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 01123357889999999998 99999999999999999987653
No 55
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.5e-46 Score=323.75 Aligned_cols=260 Identities=27% Similarity=0.366 Sum_probs=207.3
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.+.||+|+||.||++.+..+|..||+|++..... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 19 VLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhce-EEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence 34666 679999999999999999999999999999975432 3344567788999999999999999999875432
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...+++||||+.+ +|.+.+. ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~-~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEecCCC
Confidence 1357999999977 6666654 34889999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC---------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--------- 239 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------- 239 (289)
+.............+++.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+........+.....
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9765444344455788999999977654 899999999999999999999999875543322211111000
Q ss_pred ------------------------------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 240 ------------------------------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 240 ------------------------------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
........++.+++|+.+||. ||++|||+.|+|.||||..+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 000112235788999999999 9999999999999999987543
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.7e-47 Score=325.69 Aligned_cols=252 Identities=23% Similarity=0.421 Sum_probs=210.5
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||.||++.+..+|..||+|+++..... .......+.+|+++++.++||||+.+.+.+... ..+++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--~~~~lv~E~~ 77 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLCFVMEYA 77 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--CEEEEEEeCC
Confidence 4699999999999999999999999999864332 233456678899999999999999999877443 6899999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAH 180 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~~ 180 (289)
++++|..++.....+++..+..++.|++.||.|||+ .| ++|+||||+||+++.+ +.++|+|||++.... ......
T Consensus 78 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 78 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCC-CCEEEecCCCCeecCCCCcccc
Confidence 999999999888889999999999999999999997 78 9999999999999988 899999999987543 222233
Q ss_pred cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+ .++.++|||||||++|+|++|..||.+...... ...+.... ...+...++.+.+++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-~~~i~~~~--~~~p~~~~~~~~~li~~~L 231 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FELILMEE--IRFPRTLSPEAKSLLSGLL 231 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-HHHHhcCC--CCCCCCCCHHHHHHHHHHh
Confidence 4568999999997764 489999999999999999999999987554333 33333222 2234557899999999999
Q ss_pred c-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 260 A-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
+ ||++|+ ++.++++||||++..|.
T Consensus 232 ~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 232 KKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred hcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 8 999996 99999999999987654
No 57
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-46 Score=311.75 Aligned_cols=258 Identities=25% Similarity=0.413 Sum_probs=224.7
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.++.+.||+|.-|+||++....++..+|+|++....... .....+...|.++|+.++||-++.++..+ +..++.|++
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f--et~~~~cl~ 155 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-RKKLKRAQTEREILSLLDHPFLPTLYASF--ETDKYSCLV 155 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-hhHHHHHHHHHHHHHhcCCCccchhhhee--eccceeEEE
Confidence 467899999999999999999999999999998766542 44577889999999999999999999998 444799999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR- 175 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~- 175 (289)
||||+||+|..++++ ++.+++..+..++.+++-||+|||..| ++.|||||+|||+.++ |++.|+||+++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvred-GHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVRED-GHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecC-CcEEeeeccccccCCCC
Confidence 999999999999986 468999999999999999999999999 9999999999999999 9999999999754310
Q ss_pred --------------------------------c-c-----------------------ccccCCCCCCCCCCcccccC-C
Q 022956 176 --------------------------------S-H-----------------------AAHSIIGTPEYMAPELYEED-Y 198 (289)
Q Consensus 176 --------------------------------~-~-----------------------~~~~~~~~~~~~aPE~~~~~-~ 198 (289)
. . .+.+.+||-.|+|||+..+. .
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 01124578899999988876 9
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCC----HHHHhc
Q 022956 199 TEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPS----ASELLK 273 (289)
Q Consensus 199 ~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps----~~~il~ 273 (289)
..+.|.|.||+++|||+.|..||.+......+.+++.+...-...+ ..+..+++||+++|. ||++|.. +.+|-+
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 9999999999999999999999999888888888887754433322 467899999999997 9999998 999999
Q ss_pred CcccccCCCC
Q 022956 274 DPFFSELNDD 283 (289)
Q Consensus 274 h~~~~~~~~~ 283 (289)
||||++++|+
T Consensus 392 HpFF~gVnWa 401 (459)
T KOG0610|consen 392 HPFFEGVNWA 401 (459)
T ss_pred CccccCCChh
Confidence 9999999997
No 58
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.9e-47 Score=326.66 Aligned_cols=259 Identities=20% Similarity=0.301 Sum_probs=214.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||+||++.++.+|+.||+|+++..... .......+.+|+.+++.++|++++++++.+... +.+++||
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~--~~~~lv~ 80 (330)
T cd05601 4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-AQETVSFFEEERDILSISNSPWIPQLQYAFQDK--DNLYLVM 80 (330)
T ss_pred eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CeEEEEE
Confidence 6899999999999999999999999999999865321 234466788999999999999999999877443 6799999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRT-GHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCC-CCEEeccCCCCeECCCCCc
Confidence 999999999999875 67999999999999999999999999 9999999999999988 8999999999976643322
Q ss_pred --cccCCCCCCCCCCcccc-------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC-CCCCCC
Q 022956 179 --AHSIIGTPEYMAPELYE-------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-LNKVKD 248 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~-------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (289)
.....+++.|+|||.+. ..++.++|||||||++|+|++|..||..................... .....+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVS 237 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCC
Confidence 22346889999999764 23778999999999999999999999875555444443332211111 122468
Q ss_pred hHHHHHHHHHHcCCCCCCCHHHHhcCcccccCCCCC
Q 022956 249 PEVKAFIEKCIAQPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 249 ~~~~~li~~~l~dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+.+.+|+.+||++|.+||++++++.||||+.+++..
T Consensus 238 ~~~~~li~~ll~~p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 238 SDFLDLIQSLLCGQKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred HHHHHHHHHHccChhhCCCHHHHhCCCCcCCCCHHH
Confidence 899999999999999999999999999999887654
No 59
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.9e-46 Score=323.42 Aligned_cols=257 Identities=23% Similarity=0.390 Sum_probs=211.4
Q ss_pred cceeeeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCe
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 94 (289)
|++.++||+|+||.||++.+. .++..||+|++............+.+.+|+.+++.++ |++++.+++.+.. .+.
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~~ 79 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT--EAK 79 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec--CCE
Confidence 367899999999999998764 4789999999986544334455677889999999994 8999999887744 367
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++||||+++++|.+++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++....
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~DfG~~~~~~ 156 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSE-GHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCC-CCEEEeeCcCCcccc
Confidence 9999999999999999988888999999999999999999999999 9999999999999998 899999999987653
Q ss_pred Cc--cccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCC---CcHHHHHHHHhCCCCCCCCCCCC
Q 022956 175 RS--HAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSEC---DSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 175 ~~--~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
.. .......+++.|+|||.+.+. ++.++|||||||++|+|++|..||... .........+.... ...+...
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 234 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD--PPFPSFI 234 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC--CCCCCCC
Confidence 22 223345689999999977643 788999999999999999999999642 22233333333322 2234457
Q ss_pred ChHHHHHHHHHHc-CCCCCC-----CHHHHhcCcccccCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARP-----SASELLKDPFFSELND 282 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~ 282 (289)
++.+++++.+||+ ||++|| +++++++||||++.++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 8999999999998 999999 8899999999998754
No 60
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-46 Score=322.31 Aligned_cols=253 Identities=22% Similarity=0.334 Sum_probs=210.8
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
++||+|+||.||+|.++.+++.||+|+++..... .....+.+..|.+++..+ +||+|+++++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--~~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--DRLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CeEEEEEeC
Confidence 4699999999999999999999999999864332 233455677788888766 799999999988544 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+++++|.+.+...+.+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 78 VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAE-GHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeecccceecccCCcccc
Confidence 999999999988888999999999999999999999999 9999999999999998 8999999999875432 22233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. +++++|+|||||++|+|++|..||................. ..+...++.+.+++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~ll~~~L 231 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV---LYPVWLSKEAVSILKAFM 231 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHh
Confidence 45689999999977654 89999999999999999999999987555444444333222 234456889999999999
Q ss_pred c-CCCCCC-------CHHHHhcCcccccCCCCC
Q 022956 260 A-QPRARP-------SASELLKDPFFSELNDDD 284 (289)
Q Consensus 260 ~-dp~~Rp-------s~~~il~h~~~~~~~~~~ 284 (289)
+ ||++|| +++++++||||.+.+|..
T Consensus 232 ~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~ 264 (321)
T cd05591 232 TKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVL 264 (321)
T ss_pred ccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHH
Confidence 8 999999 999999999999887653
No 61
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-46 Score=329.41 Aligned_cols=258 Identities=21% Similarity=0.369 Sum_probs=212.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||+||+|.++.+++.||+|+++..... .......+.+|+.++..++|++++++++.+.+. +.+++||
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~--~~~~lv~ 80 (360)
T cd05627 4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-EKEQVAHIRAERDILVEADGAWVVKMFYSFQDK--RNLYLIM 80 (360)
T ss_pred eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CEEEEEE
Confidence 6789999999999999999999999999999754321 233466788899999999999999999887543 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc--
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-- 177 (289)
||++|++|.+++.+.+.+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~-~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAK-GHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEeeccCCccccccccc
Confidence 99999999999998888999999999999999999999999 9999999999999988 899999999986442110
Q ss_pred ----------------------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCC
Q 022956 178 ----------------------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYS 222 (289)
Q Consensus 178 ----------------------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~ 222 (289)
.....+|++.|+|||.+.+. ++.++|+|||||++|+|++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 01134689999999976654 8999999999999999999999998
Q ss_pred CCCcHHHHHHHHhCCCCCCC-CCCCCChHHHHHHHHHHcCCCCCC---CHHHHhcCcccccCCCC
Q 022956 223 ECDSVAKIYKKVTGGVKPQA-LNKVKDPEVKAFIEKCIAQPRARP---SASELLKDPFFSELNDD 283 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~dp~~Rp---s~~~il~h~~~~~~~~~ 283 (289)
.................... .....++.+++|+.+|+.||.+|+ +++++++||||++.+|.
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~~ 302 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVDWG 302 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCCCCHH
Confidence 76554444433322111111 122368899999999877999997 58999999999998764
No 62
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.3e-46 Score=314.37 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=202.9
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||+||+|.++.++..||+|+++..... .....+.+|+.+++.++||||+++++.+... ...
T Consensus 5 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 78 (288)
T cd07871 5 ETY-VKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTE--RCL 78 (288)
T ss_pred ccc-eEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC--CeE
Confidence 345 6789999999999999999999999999999754321 2234567899999999999999999987543 578
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++|+||+++ +|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.+||+|||++....
T Consensus 79 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~DfG~~~~~~ 154 (288)
T cd07871 79 TLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEK-GELKLADFGLARAKS 154 (288)
T ss_pred EEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEECcCcceeecc
Confidence 999999986 898888654 45799999999999999999999999 9999999999999988 899999999987654
Q ss_pred Ccc-ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC--C----------
Q 022956 175 RSH-AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--K---------- 239 (289)
Q Consensus 175 ~~~-~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~---------- 239 (289)
... ......+++.|+|||.+.+ .++.++|+|||||++|+|++|+.||.+....+.......... .
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 155 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred CCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 322 2233467889999997654 378999999999999999999999987554433322211100 0
Q ss_pred --------C-------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 --------P-------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 --------~-------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+ .......++.+.+|+.+||+ ||.+|||++|+++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0 00112357789999999999 99999999999999998
No 63
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=318.46 Aligned_cols=257 Identities=23% Similarity=0.419 Sum_probs=210.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCH----------HHHHHHHHHHHHHHhCCCCceEEeeeeEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDP----------VLVNRLHSEVQLLRTLKNKYIIVCYSVWLD 89 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 89 (289)
.+.+.||+|.||.|-+|.+..+++.||||++....+.... ...+..++|+.+++++.|||||+++++.-+
T Consensus 100 ~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDD 179 (576)
T KOG0585|consen 100 ELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDD 179 (576)
T ss_pred ehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecC
Confidence 5788999999999999999999999999999876543211 124689999999999999999999998877
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...+.+|+|+|||..|.+...-....-+++.+++++++.++.||+|||.+| ++||||||+|+|++.+ |.+||+|||.
T Consensus 180 P~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~-g~VKIsDFGV 256 (576)
T KOG0585|consen 180 PESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSD-GTVKISDFGV 256 (576)
T ss_pred cccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCC-CcEEeeccce
Confidence 777899999999998876554443333999999999999999999999999 9999999999999999 9999999999
Q ss_pred ccccCCc------cccccCCCCCCCCCCcccccC-----CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC
Q 022956 170 AAIVGRS------HAAHSIIGTPEYMAPELYEED-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 170 ~~~~~~~------~~~~~~~~~~~~~aPE~~~~~-----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~ 238 (289)
+...... .......|||.|+|||...++ .+.+.||||||++||+|+.|+.||-+.... .....+....
T Consensus 257 s~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~-~l~~KIvn~p 335 (576)
T KOG0585|consen 257 SNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL-ELFDKIVNDP 335 (576)
T ss_pred eeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH-HHHHHHhcCc
Confidence 9876332 223346899999999965431 466899999999999999999999874433 3344333332
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.......-..+.+++||.+||. ||++|+++.+|..|||...-
T Consensus 336 L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 336 LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 2211122257899999999998 99999999999999999875
No 64
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.1e-46 Score=319.93 Aligned_cols=251 Identities=22% Similarity=0.379 Sum_probs=209.7
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||+||+|.++.++..||+|+++..... .......+..|..+++.+ +|||++++++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--~~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--DRLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEEcC
Confidence 4699999999999999999999999999865322 233355677888888887 699999999987543 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Cccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~~ 180 (289)
++|++|..++.....+++.++..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.... ......
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 78 VNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSE-GHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCC-CcEEecccCCCeecCcCCCccc
Confidence 999999999988888999999999999999999999999 9999999999999998 899999999986532 222233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
..++++.|+|||.+.+. ++.++|+|||||++|+|++|..||....... ....+..... ..+...++.+.+|+.+||
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-~~~~i~~~~~--~~~~~~~~~~~~li~~~l 231 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILEDEV--RYPRWLSKEAKSILKSFL 231 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-HHHHHHcCCC--CCCCcCCHHHHHHHHHHc
Confidence 45688999999977654 8999999999999999999999998755443 3333333221 234457899999999999
Q ss_pred c-CCCCCCCH-----HHHhcCcccccCCC
Q 022956 260 A-QPRARPSA-----SELLKDPFFSELND 282 (289)
Q Consensus 260 ~-dp~~Rps~-----~~il~h~~~~~~~~ 282 (289)
. ||++||++ .+++.||||++.+|
T Consensus 232 ~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 232 TKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred cCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 8 99999999 99999999999876
No 65
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-47 Score=313.87 Aligned_cols=256 Identities=21% Similarity=0.437 Sum_probs=223.6
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
..|.+.+.||.|.||+|-+|.....|..||||.++..... ++...-.+.+|+++++.|+||||++++.+| +..+.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlvhIRREIeIMSsLNHPhII~IyEVF--ENkdKIv 129 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLVHIRREIEIMSSLNHPHIIQIYEVF--ENKDKIV 129 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHHHHHHHHHHHhhcCCCceeehhhhh--cCCceEE
Confidence 3457889999999999999999889999999999887654 455577799999999999999999999999 4446899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|||||..+|.|.+++...+.|++.++..+++||++|+.|+|+++ ++|+|||.+|||+|.| +++||+|||++..+...
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N-~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQN-NNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCC-CCeeeeccchhhhhccc
Confidence 99999999999999999999999999999999999999999999 9999999999999999 99999999999999888
Q ss_pred cccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 177 HAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
+.....||+|-|.+||+..+. -.|..|.||||+++|.|+.|.+||++.+ ...+..++..+... ....+..+.-|
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-hk~lvrQIs~GaYr---EP~~PSdA~gL 282 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-HKRLVRQISRGAYR---EPETPSDASGL 282 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-HHHHHHHhhccccc---CCCCCchHHHH
Confidence 888899999999999988876 4677999999999999999999999854 44555555554322 12235678999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 255 IEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
|+.||- +|++|.|+++|-.|=|+ +|..+
T Consensus 283 IRwmLmVNP~RRATieDiAsHWWv-Nwgy~ 311 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWWV-NWGYN 311 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhee-ecccc
Confidence 999998 99999999999988554 44433
No 66
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.5e-46 Score=324.98 Aligned_cols=258 Identities=19% Similarity=0.289 Sum_probs=211.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||+|+||.||++.++.++..||+|++...... .......+.+|+.+++.++|||++++++.+.+. +.+++|
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~--~~~~lv 121 (370)
T cd05596 45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-KRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD--KYLYMV 121 (370)
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CEEEEE
Confidence 36789999999999999999999999999999754321 122345577899999999999999999887543 689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
|||++|++|.+++... .+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 122 MEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCC-CCEEEEeccceeeccCCCc
Confidence 9999999999998764 5899999999999999999999999 9999999999999988 899999999997654332
Q ss_pred -ccccCCCCCCCCCCccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC-CCCCChH
Q 022956 178 -AAHSIIGTPEYMAPELYEE-----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL-NKVKDPE 250 (289)
Q Consensus 178 -~~~~~~~~~~~~aPE~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 250 (289)
......+++.|+|||.+.+ .++.++|+|||||++|+|++|..||...................... ....+..
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 277 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ 277 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence 2234568999999997643 27889999999999999999999998755544444433322221111 1246889
Q ss_pred HHHHHHHHHc-CCCC--CCCHHHHhcCcccccCCCC
Q 022956 251 VKAFIEKCIA-QPRA--RPSASELLKDPFFSELNDD 283 (289)
Q Consensus 251 ~~~li~~~l~-dp~~--Rps~~~il~h~~~~~~~~~ 283 (289)
+++|+.+||+ +|++ |+++++++.||||++.+|.
T Consensus 278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred HHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 9999999998 8887 9999999999999987654
No 67
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.4e-45 Score=317.98 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=210.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc-eEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY-IIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|+||.||+|.++.+++.||+|++...... .....+.+..|..++..+.|++ ++.+++.+... +.+++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv 79 (324)
T cd05587 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--DRLYFV 79 (324)
T ss_pred eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC--CEEEEE
Confidence 6789999999999999999999999999999864332 2334567788999999998754 66777666433 579999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Ccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~ 177 (289)
|||+++++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.... ...
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAE-GHIKIADFGMCKENIFGGK 156 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCC-CCEEEeecCcceecCCCCC
Confidence 999999999999988888999999999999999999999999 9999999999999988 899999999986432 222
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
......+++.|+|||.+.+. ++.++|+|||||++|+|++|..||.+.......... .... ...+...++.+.+++.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i-~~~~--~~~~~~~~~~~~~li~ 233 (324)
T cd05587 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI-MEHN--VSYPKSLSKEAVSICK 233 (324)
T ss_pred ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH-HcCC--CCCCCCCCHHHHHHHH
Confidence 23345689999999977654 889999999999999999999999875544444333 3322 2234557889999999
Q ss_pred HHHc-CCCCCCCH-----HHHhcCcccccCCCC
Q 022956 257 KCIA-QPRARPSA-----SELLKDPFFSELNDD 283 (289)
Q Consensus 257 ~~l~-dp~~Rps~-----~~il~h~~~~~~~~~ 283 (289)
+||. ||.+|++. +++++||||+..+|.
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~ 266 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREHAFFRRIDWE 266 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9998 99999976 899999999988763
No 68
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.6e-46 Score=318.57 Aligned_cols=252 Identities=23% Similarity=0.398 Sum_probs=206.4
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-CCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRT-LKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
++||+|+||.||+|.+..+++.||+|+++..... .....+.+..|..++.. .+||||+++++.+... ..+++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--~~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--EHLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEEcC
Confidence 4699999999999999999999999999864322 12234445556666654 4899999999887443 689999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
++|++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 78 LNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKD-GHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCC-CCEEEccCcCCeECCCCCCccc
Confidence 999999999988888999999999999999999999999 9999999999999988 8999999999975432 22334
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
..++++.|+|||.+.+. ++.++|+|||||++|+|++|..||.+..... ....+.... ...+...+..+.+++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~--~~~~~~~~~~~~~ll~~~l 231 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-LFDSILNDR--PHFPRWISKEAKDCLSKLF 231 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCC--CCCCCCCCHHHHHHHHHHc
Confidence 45789999999977654 8899999999999999999999998755443 333333322 2234557889999999999
Q ss_pred c-CCCCCCCH-HHHhcCcccccCCCC
Q 022956 260 A-QPRARPSA-SELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps~-~~il~h~~~~~~~~~ 283 (289)
. ||++||++ .+++.||||+..+|.
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05592 232 ERDPTKRLGVDGDIRQHPFFRGIDWE 257 (316)
T ss_pred cCCHHHcCCChHHHHcCcccCCCCHH
Confidence 8 99999986 588899999987653
No 69
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.4e-46 Score=320.30 Aligned_cols=253 Identities=20% Similarity=0.394 Sum_probs=209.0
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||+||+|.++.+++.||+|+++..... .......+.+|..++.++ +||||+++++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--SRLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--CEEEEEEeC
Confidence 4699999999999999999999999999865432 334456678888888776 799999999987554 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+++++|..++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CCEEEeeCCccccccCCCCccc
Confidence 999999999988888999999999999999999999999 9999999999999998 8999999999875322 22233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCC--------CcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSEC--------DSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||... .......+.+.... ...+...+..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~ 232 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC--CCCCCCCCHHH
Confidence 45689999999977654 889999999999999999999999521 11222333333322 22455678899
Q ss_pred HHHHHHHHc-CCCCCCC------HHHHhcCcccccCCCC
Q 022956 252 KAFIEKCIA-QPRARPS------ASELLKDPFFSELNDD 283 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps------~~~il~h~~~~~~~~~ 283 (289)
.+++.+||+ ||++||+ +++++.||||++.+|.
T Consensus 233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~ 271 (329)
T cd05618 233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 271 (329)
T ss_pred HHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 999999998 9999998 5899999999998763
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-45 Score=317.14 Aligned_cols=257 Identities=28% Similarity=0.476 Sum_probs=210.9
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++|+||+++++++... +.+
T Consensus 5 ~~y-~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (333)
T cd06650 5 DDF-EKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEI 78 (333)
T ss_pred hhh-heeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC--CEE
Confidence 455 68999999999999999999999999999987542 344567789999999999999999999988654 689
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++||||+.+++|.+++...+.+++..+..++.|++.||.|||+. + ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI 155 (333)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCC-CCEEEeeCCcchhhh
Confidence 99999999999999999888899999999999999999999974 7 9999999999999988 899999999987553
Q ss_pred CccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH-----------------------
Q 022956 175 RSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI----------------------- 230 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~----------------------- 230 (289)
.. ......++..|+|||.+.+. ++.++|+|||||++|+|++|..||.........
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 156 DS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred hh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 32 22334678899999977654 889999999999999999999999753321111
Q ss_pred --------------------HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 231 --------------------YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 231 --------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
...+.....+.......+.++++|+.+||+ ||++||++++++.||||+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 307 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEA 307 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence 011111111122222356789999999998 9999999999999999988643
No 71
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.4e-46 Score=319.12 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=208.4
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHH---HhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL---RTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l---~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
|++.++||+|+||.||+|.++.+|+.||+|+++..... .....+.+.+|.+++ +.++||||+++++.+... +.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~--~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE--DHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC--CEE
Confidence 36789999999999999999999999999999864321 222345566665554 567899999999987543 689
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
|+||||+++++|...+.. ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.+||+|||++.....
T Consensus 78 ~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~-~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTE-GFVKIADFGLCKEGMG 153 (324)
T ss_pred EEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CcEEeCcccCCccCCC
Confidence 999999999999988865 56999999999999999999999999 9999999999999998 8999999999865422
Q ss_pred -ccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 176 -SHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 176 -~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
........+++.|+|||.+.+. ++.++|+|||||++|+|++|..||.+............... ..+...++.+.+
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~ 230 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFLSREAIS 230 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCCCCCHHHHH
Confidence 2223345689999999977654 88899999999999999999999987554444333333322 234456899999
Q ss_pred HHHHHHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 254 FIEKCIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 254 li~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
++.+||+ ||++|| ++.++++||||+++++.
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~ 266 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD 266 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence 9999998 999999 79999999999987644
No 72
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-45 Score=321.77 Aligned_cols=259 Identities=26% Similarity=0.361 Sum_probs=209.1
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC----
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD---- 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 90 (289)
.++| ++.++||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++|||++++++++...
T Consensus 23 ~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 23 LKRY-QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hcce-eEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 4566 679999999999999999999999999999975432 334456778899999999999999999877532
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
....+++||||+++ +|.+.+.. .+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCC-CcEEEEeCCCc
Confidence 22468999999976 77777753 4888999999999999999999999 9999999999999998 89999999999
Q ss_pred cccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---------
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--------- 240 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 240 (289)
.............+++.|+|||.+.+. ++.++|||||||++|+|++|+.||.+.+........+.....+
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence 876554444556789999999977654 8999999999999999999999998766544433332211100
Q ss_pred ------------------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 241 ------------------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 241 ------------------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
.......++.+++||.+||+ ||++|||++++|+||||..+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 00111234678999999999 9999999999999999987533
No 73
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.5e-45 Score=312.37 Aligned_cols=257 Identities=21% Similarity=0.337 Sum_probs=211.5
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||+|+||+||++.+..+++.||+|++...... .......+.+|+.+++.++||+++++++.+... +.+++|
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 78 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC--CeEEEE
Confidence 36789999999999999999999999999999764332 222345577899999999999999999887443 679999
Q ss_pred eccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|||+.+++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDY-GHIRISDLGLAVEIPEG 155 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCC-CCEEEeeCCCceecCCC
Confidence 9999999999887643 46899999999999999999999999 9999999999999988 89999999998776444
Q ss_pred cccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK---IYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.......+++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+...... ....+... ....+...++.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 233 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAAR 233 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHH
Confidence 33344568899999997654 488899999999999999999999987543222 22222221 2223445788999
Q ss_pred HHHHHHHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 253 AFIEKCIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 253 ~li~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
+|+.+||. ||++|| ++++++.||||++.+++
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 234 SICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred HHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 99999998 999999 89999999999987665
No 74
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-46 Score=322.09 Aligned_cols=251 Identities=24% Similarity=0.393 Sum_probs=209.7
Q ss_pred eeecccCcceEEEEee---cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFD---QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+.||+|+||.||++.+ ..+|+.||+|+++.... .......+.+|++++++++||||+++++.+... ..+|+||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--GKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CEEEEEE
Confidence 6799999999999876 35789999999986543 222345677899999999999999999887543 6799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-cc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~-~~ 178 (289)
||+++++|.+++.+...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++...... ..
T Consensus 78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCC-CcEEEeeccCCcccCCCCCc
Confidence 99999999999988888999999999999999999999999 9999999999999988 89999999998765433 23
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....+++.|+|||.+.+. ++.++|+|||||++|+|++|+.||................. ..+...++.+.+|+.+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~ 231 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL---GMPQFLSPEAQSLLRA 231 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHH
Confidence 3445789999999977654 88899999999999999999999987655444443333221 2344568999999999
Q ss_pred HHc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 258 CIA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 258 ~l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
||+ ||++||+ +++++.||||+..+|.
T Consensus 232 ~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 232 LFKRNPANRLGAGPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred HhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence 998 9999999 7889999999987653
No 75
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-45 Score=317.65 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=207.2
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-CCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRT-LKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
++||+|+||.||+|.++.+|+.||+|+++...... ......+..|..++.. ++||+++++++.+... +.+++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--EHLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--CEEEEEECC
Confidence 46999999999999999999999999998643211 1224455667777765 4899999999888544 689999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+.+++|..++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRD-GHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEeCccCCCeecccCCCcee
Confidence 999999999988888999999999999999999999999 9999999999999988 8999999999864322 22233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||..... ....+.+.... ...+...+..+++|+.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-DELFESIRVDT--PHYPRWITKESKDILEKLF 231 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCC--CCCCCCCCHHHHHHHHHHc
Confidence 45689999999977654 89999999999999999999999986544 33444443322 2234457889999999999
Q ss_pred c-CCCCCCCH-HHHhcCcccccCCCC
Q 022956 260 A-QPRARPSA-SELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps~-~~il~h~~~~~~~~~ 283 (289)
+ ||++||++ ++++.||||++.++.
T Consensus 232 ~~dP~~R~~~~~~~~~h~~f~~~~~~ 257 (316)
T cd05620 232 ERDPTRRLGVVGNIRGHPFFKTINWT 257 (316)
T ss_pred cCCHHHcCCChHHHHcCCCcCCCCHH
Confidence 8 99999998 589999999998764
No 76
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.4e-45 Score=320.49 Aligned_cols=259 Identities=27% Similarity=0.359 Sum_probs=208.4
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 15 VLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhce-eEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 34666 679999999999999999999999999999875432 3444567888999999999999999999875432
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...+++||||+++ +|.+.+.. .+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~-~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCC-CCEEEeeCcc
Confidence 2457999999977 67776653 4889999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC---------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--------- 239 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------- 239 (289)
+.............+++.|+|||.+.+. ++.++|+|||||++++|++|..||.+..........+.....
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 9876555444556789999999977654 899999999999999999999999875543332222111000
Q ss_pred ------------------------------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 240 ------------------------------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 240 ------------------------------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
........+..+++|+.+||+ ||++|||+.|+|+||||..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 000112235678999999999 999999999999999998664
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-45 Score=311.30 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=206.0
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|+||+||++.++.+|+.||+|.+...... .....+.+..|+++++.++|++++++.+.+.. +..+++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCC
Confidence 79999999999999999999999999764332 22334567889999999999999999887744 3679999999999
Q ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-cc
Q 022956 105 GNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-AA 179 (289)
Q Consensus 105 ~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-~~ 179 (289)
++|.+.+.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++....... ..
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~ 154 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDND-GNVRISDLGLAVELKDGQSKT 154 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCccceecCCCCccc
Confidence 999888742 456899999999999999999999999 9999999999999988 899999999987654322 22
Q ss_pred ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVA---KIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
....+++.|+|||.+.+. ++.++|+||||+++|+|++|+.||....... .....+.. .+...+...++.+.+++
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li 232 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN--DSVTYPDKFSPASKSFC 232 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc--cCCCCcccCCHHHHHHH
Confidence 345688999999976644 8899999999999999999999997643322 22222222 12233455788999999
Q ss_pred HHHHc-CCCCCC-----CHHHHhcCcccccCCCCC
Q 022956 256 EKCIA-QPRARP-----SASELLKDPFFSELNDDD 284 (289)
Q Consensus 256 ~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~~ 284 (289)
.+||+ ||++|| +++++++||||++..|..
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~ 267 (280)
T cd05608 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQ 267 (280)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence 99998 999999 889999999999987664
No 78
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.3e-45 Score=321.72 Aligned_cols=257 Identities=19% Similarity=0.309 Sum_probs=209.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||+|+||.||++.++.+++.+|+|++...... .......+.+|+.+++.++||||+++++.+... ..+++|
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--~~~~lv 121 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--KYLYMV 121 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CEEEEE
Confidence 47899999999999999999999999999999754321 223345678899999999999999999988544 689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
|||+++++|.+++... .+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.+||+|||++........
T Consensus 122 ~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~-~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEEecccceecccCCc
Confidence 9999999999999764 5899999999999999999999999 9999999999999988 8999999999987643322
Q ss_pred --cccCCCCCCCCCCccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC-CCCCChH
Q 022956 179 --AHSIIGTPEYMAPELYEE-----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL-NKVKDPE 250 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 250 (289)
.....+++.|+|||.+.+ .++.++|+|||||++|+|++|..||...................... ....+..
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 277 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKH 277 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHH
Confidence 234568999999997653 26789999999999999999999998765544444444332222111 1235889
Q ss_pred HHHHHHHHHc-CCC--CCCCHHHHhcCcccccCCC
Q 022956 251 VKAFIEKCIA-QPR--ARPSASELLKDPFFSELND 282 (289)
Q Consensus 251 ~~~li~~~l~-dp~--~Rps~~~il~h~~~~~~~~ 282 (289)
+++++..||. ++. .|+++.++++||||++..+
T Consensus 278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred HHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 9999999997 443 3899999999999998544
No 79
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.1e-45 Score=317.22 Aligned_cols=253 Identities=19% Similarity=0.380 Sum_probs=210.3
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||+||+|.+..+++.||+|+++..... .....+.+.+|..++.++ +||+++.+++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--SRLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--CEEEEEEeC
Confidence 4699999999999999999999999999865332 234466788899999888 689999999887544 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Cccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~~ 180 (289)
+++++|..++...+.+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.... ......
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 78 VNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCC-CCEEEeccccceeccCCCCcee
Confidence 999999999988888999999999999999999999999 9999999999999998 899999999987532 222334
Q ss_pred cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCC------CcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 181 SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSEC------DSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
..++++.|+|||.+.+ .++.++|+||||+++|+|++|..||... .......+.+... +...+...++.+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~ 232 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASH 232 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHH
Confidence 4678999999997654 4889999999999999999999999632 2223333433332 22345567899999
Q ss_pred HHHHHHc-CCCCCCC------HHHHhcCcccccCCCC
Q 022956 254 FIEKCIA-QPRARPS------ASELLKDPFFSELNDD 283 (289)
Q Consensus 254 li~~~l~-dp~~Rps------~~~il~h~~~~~~~~~ 283 (289)
++.+||+ ||++|++ +++++.||||+.++|+
T Consensus 233 li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 233 VLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred HHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 9999998 9999987 5799999999998765
No 80
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.8e-45 Score=316.02 Aligned_cols=256 Identities=23% Similarity=0.331 Sum_probs=211.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|+||.||+|.++.+++.||+|+++..... .......+..|..++..+ .|++++.+++.+... +.+++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv 79 (323)
T cd05616 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM--DRLYFV 79 (323)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC--CEEEEE
Confidence 6789999999999999999999999999999864322 223345566777888777 468888888877443 679999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~ 177 (289)
|||+++++|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... ..
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENMWDGV 156 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCC-CcEEEccCCCceecCCCCC
Confidence 999999999999988888999999999999999999999999 9999999999999998 8999999999875432 22
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
......|++.|+|||.+.+. ++.++|+|||||++|+|++|..||................. ..+...++.+.+++.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~ 233 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV---AYPKSMSKEAVAICK 233 (323)
T ss_pred ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCCcCCHHHHHHHH
Confidence 23345689999999977654 89999999999999999999999987655444444433322 234457899999999
Q ss_pred HHHc-CCCCCCCH-----HHHhcCcccccCCCCC
Q 022956 257 KCIA-QPRARPSA-----SELLKDPFFSELNDDD 284 (289)
Q Consensus 257 ~~l~-dp~~Rps~-----~~il~h~~~~~~~~~~ 284 (289)
+||+ ||++|++. .+++.||||+.++|..
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~ 267 (323)
T cd05616 234 GLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK 267 (323)
T ss_pred HHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9998 99999974 8999999999887643
No 81
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.1e-45 Score=318.26 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=205.5
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHH-HHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSE-VQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e-~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
++||+|+||.||+|.++.+|+.||+|++.......... ...+.+| ..+++.++||||+++++.+... +.+++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKE-QNHIMAERNVLLKNLKHPFLVGLHYSFQTA--EKLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhH-HHHHHHHHHHHHHhCCCCCccceeeEEEcC--CEEEEEEcC
Confidence 46999999999999999999999999997643322222 3334444 4567889999999999877443 689999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+++++|...+.....+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 78 VNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEccCCCCccCCCCCCccc
Confidence 999999999988888999999999999999999999999 9999999999999998 8999999999875322 22233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||...+.. .....+.... ...+...+..+.+++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~li~~~l 231 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-QMYDNILHKP--LQLPGGKTVAACDLLVGLL 231 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-HHHHHHhcCC--CCCCCCCCHHHHHHHHHHc
Confidence 45689999999977654 889999999999999999999999875433 3444444332 2334456889999999999
Q ss_pred c-CCCCCCCH----HHHhcCcccccCCCC
Q 022956 260 A-QPRARPSA----SELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps~----~~il~h~~~~~~~~~ 283 (289)
+ ||.+||++ .+++.|+||..++|.
T Consensus 232 ~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 232 HKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred cCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 8 99999875 599999999987653
No 82
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.6e-45 Score=315.16 Aligned_cols=252 Identities=23% Similarity=0.398 Sum_probs=206.9
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-CCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRT-LKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||.||+|.++.+++.||+|+++..... ..........|..++.. ++||||+++++.+.+. +.+++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEEEEeC
Confidence 4699999999999999999999999999864321 12223455667777765 4899999999888554 579999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+++++|.+++.....+++.++..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 78 LNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTD-GHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEccCCcceECCCCCCcee
Confidence 999999999988778999999999999999999999999 9999999999999998 8999999999875322 22233
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||....... ....+..... ..+...+..+++++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-~~~~i~~~~~--~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-LFQSIRMDNP--CYPRWLTREAKDILVKLF 231 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCC--CCCccCCHHHHHHHHHHh
Confidence 45689999999977654 8999999999999999999999998755443 3333333221 234457889999999999
Q ss_pred c-CCCCCCCHH-HHhcCcccccCCCC
Q 022956 260 A-QPRARPSAS-ELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps~~-~il~h~~~~~~~~~ 283 (289)
+ ||++||++. +++.||||++++|.
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05619 232 VREPERRLGVKGDIRQHPFFREIDWS 257 (316)
T ss_pred ccCHhhcCCChHHHHcCcccCCCCHH
Confidence 8 999999996 99999999998764
No 83
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.8e-45 Score=310.51 Aligned_cols=254 Identities=30% Similarity=0.447 Sum_probs=200.9
Q ss_pred cccceeeeecccCcceEEEEeecC-CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC---CCCceEEeeeeEEe---
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQE-EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL---KNKYIIVCYSVWLD--- 89 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~--- 89 (289)
+| ++.+.||+|+||.||+|.+.. +|..+|+|.++.....+. ....+.+|+.+++.+ +||||+++++++..
T Consensus 2 ~Y-~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 2 QY-ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred Cc-ceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC--chHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 44 689999999999999999854 468899999986543221 123344566665554 69999999988752
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
.....+++|+|++.+ +|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+||
T Consensus 79 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~-~~~kl~Df 154 (290)
T cd07862 79 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADF 154 (290)
T ss_pred CCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCC-CCEEEccc
Confidence 233568999999975 899988753 45899999999999999999999999 9999999999999988 89999999
Q ss_pred CCccccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--C---
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--Q--- 241 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~--- 241 (289)
|++.............+++.|+|||.+.+ .++.++|||||||++|+|++|..||.+....+.....+.....+ .
T Consensus 155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 99987655444445678999999997654 48899999999999999999999998766555544443221100 0
Q ss_pred -------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 242 -------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 242 -------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
......++.+++|+.+||+ ||++|||+.++|+||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0112357788999999999 99999999999999998
No 84
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.6e-46 Score=319.22 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=205.7
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||+||+|.++.+++.||+|++..............+.++..+++.++||||+++++.+... +.+++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--DKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--CeEEEEEeCC
Confidence 46999999999999999999999999998644322222233344444567889999999999887544 6799999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cccccc
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAHS 181 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~~ 181 (289)
++++|.+++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... ......
T Consensus 79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~-~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEEccCCCCcccccCCCCccc
Confidence 99999999998888999999999999999999999999 9999999999999988 8999999999875422 223344
Q ss_pred CCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc
Q 022956 182 IIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA 260 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 260 (289)
..+++.|+|||.+.+. ++.++|||||||++|+|++|..||.+......... +.... .......++.+.+++.+||+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN-ILNKP--LQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHH-HHhCC--cCCCCCCCHHHHHHHHHHcc
Confidence 5689999999977654 88999999999999999999999987554443333 33322 22334568899999999998
Q ss_pred -CCCCCCCHH----HHhcCcccccCCC
Q 022956 261 -QPRARPSAS----ELLKDPFFSELND 282 (289)
Q Consensus 261 -dp~~Rps~~----~il~h~~~~~~~~ 282 (289)
||.+|+++. ++++|+||...+|
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 999999876 8999999988765
No 85
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-45 Score=318.83 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=204.9
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHH-HHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEV-QLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+||.||+|.++.+|+.+|+|++....... ......+..|. .+++.++||||+++++.+... +.+++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--~~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--EKLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--CEEEEEEcC
Confidence 46999999999999999999999999997653322 22234444444 457789999999999887543 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Cccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~~ 180 (289)
+++++|..++.....+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++.... ......
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQ-GHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEeecCCcccCCCCCCCcc
Confidence 999999999988888999999999999999999999999 9999999999999998 899999999987532 222334
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
...+++.|+|||.+.+. ++.++|+|||||++|+|++|..||............. ... .......+..+.+++.+||
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ll~~ll 231 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL-HKP--LVLRPGASLTAWSILEELL 231 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH-cCC--ccCCCCCCHHHHHHHHHHh
Confidence 45689999999977654 8899999999999999999999998755444333333 322 1223346889999999999
Q ss_pred c-CCCCCCCH----HHHhcCcccccCCC
Q 022956 260 A-QPRARPSA----SELLKDPFFSELND 282 (289)
Q Consensus 260 ~-dp~~Rps~----~~il~h~~~~~~~~ 282 (289)
+ +|.+||++ .+++.||||+...|
T Consensus 232 ~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 232 EKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred ccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 8 99999876 59999999998754
No 86
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-44 Score=301.75 Aligned_cols=252 Identities=33% Similarity=0.584 Sum_probs=212.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC-HHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+.+.||+|++|.||.+.+..++..+|+|.+........ ......+.+|++++++++|||++++++.+... ..++++
T Consensus 5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v 82 (263)
T cd06625 5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD--ETLSIF 82 (263)
T ss_pred cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC--CeEEEE
Confidence 578999999999999999999999999999986543221 23356789999999999999999999988554 589999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+++++|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~-~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeecccceecccccc
Confidence 999999999999988888999999999999999999999999 9999999999999988 8999999999876533211
Q ss_pred c----ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 179 A----HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 179 ~----~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
. ....++..|+|||...+. ++.++|+||||+++|+|++|+.||.................. ...+...+..+.+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-PQLPSHVSPDARN 238 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-CCCCccCCHHHHH
Confidence 1 234567899999977655 889999999999999999999999876655555544433332 3345567899999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
++..||. +|++||++.+++.||||
T Consensus 239 li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 239 FLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999998 99999999999999997
No 87
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.3e-45 Score=307.32 Aligned_cols=253 Identities=21% Similarity=0.346 Sum_probs=203.9
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|+||.||++.++.+|+.||+|.+....... ......+..|+++++.++|||++++++.+.. +..+++||||++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCC
Confidence 799999999999999999999999997544321 1123345669999999999999999988744 3689999999999
Q ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccC
Q 022956 105 GNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 182 (289)
Q Consensus 105 ~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~ 182 (289)
++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++............
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~~l~Dfg~~~~~~~~~~~~~~ 154 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQ-GNCRLSDLGLAVELKDGKTITQR 154 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCC-CCEEEeeceeeeecCCCceeecc
Confidence 9999887643 35888999999999999999999999 9999999999999988 89999999998876554444445
Q ss_pred CCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 183 IGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVA---KIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 183 ~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
.++..|+|||.+.+. ++.++|+|||||++|+|++|..||....... ........... .......++++++|+.+|
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~ 233 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KFEHQNFTEESKDICRLF 233 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-ccccccCCHHHHHHHHHH
Confidence 688999999976544 8899999999999999999999997643221 12222211111 112234688999999999
Q ss_pred Hc-CCCCCCCH----HHHhcCcccccCCCCC
Q 022956 259 IA-QPRARPSA----SELLKDPFFSELNDDD 284 (289)
Q Consensus 259 l~-dp~~Rps~----~~il~h~~~~~~~~~~ 284 (289)
|+ ||++||++ ++++.||||+.++++.
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~ 264 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcCCCHHH
Confidence 98 99999999 7788999999987643
No 88
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-45 Score=320.50 Aligned_cols=253 Identities=27% Similarity=0.353 Sum_probs=201.7
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++.+... ...+++
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv 161 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYN--KFTCLI 161 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC--CeeEEE
Confidence 478999999999999999999999999999753 23457799999999999999999988554 578999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc--
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-- 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~-- 176 (289)
+|++.+ +|..++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++......
T Consensus 162 ~e~~~~-~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 162 LPRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHP-GDVCLGDFGAACFPVDINA 237 (391)
T ss_pred EecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCC-CCEEEEeCCcccccccccc
Confidence 999964 89998888788999999999999999999999999 9999999999999988 89999999998654322
Q ss_pred cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCc-------HHHHHHHHhC------------
Q 022956 177 HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDS-------VAKIYKKVTG------------ 236 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~-------~~~~~~~~~~------------ 236 (289)
.......+++.|+|||.+.+. +++++|||||||++|+|++|..||..... .......+..
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 223345789999999977654 89999999999999999999987643211 1111111100
Q ss_pred -------------C-C-CCCCC-----CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 237 -------------G-V-KPQAL-----NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 237 -------------~-~-~~~~~-----~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
. . .+... ....+..+.+|+.+||+ ||++|||++|+|+||||+.+...-+.|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~ 389 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNP 389 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCC
Confidence 0 0 00000 01135678999999999 999999999999999999876554443
No 89
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=314.43 Aligned_cols=266 Identities=24% Similarity=0.375 Sum_probs=232.2
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+.+.| .+.+.||+|-|+.|-+|+|.-||+.||||++....+ +......+.+|+..++.++|||||+++++.-. ..
T Consensus 16 IAGLY-DLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl--D~~st~hlfqEVRCMKLVQHpNiVRLYEViDT--QT 90 (864)
T KOG4717|consen 16 IAGLY-DLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL--DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--QT 90 (864)
T ss_pred eeeee-hhhhhhcCCceehhhhhhhhcccceeEEEEeccccc--chhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--cc
Confidence 45566 689999999999999999999999999999998876 55556778999999999999999999998733 36
Q ss_pred eeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
.+|+|.|+-++|.|++++-++ ..+.++.+.+++.||+.|+.|+|+.. ++|+||||+||.+....|-|||+|||++..
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeecccccc
Confidence 799999999999999999765 56999999999999999999999999 999999999999988889999999999998
Q ss_pred cCCccccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
+....+....||+..|-|||++-++ -.|+.||||||+|+|-|++|+.||....+.+.+.-+..=. -..+.+.+.+
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK---YtvPshvS~e 245 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK---YTVPSHVSKE 245 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc---ccCchhhhHH
Confidence 8888888899999999999987665 4678999999999999999999998766655554443322 1246677899
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPSP 289 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~~ 289 (289)
.++||..||. ||++|.+.++|..++|++..|...+-.+|
T Consensus 246 CrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iP 285 (864)
T KOG4717|consen 246 CRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIP 285 (864)
T ss_pred HHHHHHHHHhcCchhhccHHHHhccccccCCCCCccccCc
Confidence 9999999998 99999999999999999999876554444
No 90
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=317.37 Aligned_cols=252 Identities=23% Similarity=0.409 Sum_probs=210.3
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
..+..++.+.||+|-||.||.+.+. ....||+|.++..... .+.|.+|++++++|+|++||++++++..+ ..
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~-----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~--~p 275 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS-----PEAFLREAQIMKKLRHEKLVKLYGVCTKQ--EP 275 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC-----hhHHHHHHHHHHhCcccCeEEEEEEEecC--Cc
Confidence 3444567899999999999999886 2348999999876432 35667899999999999999999998554 47
Q ss_pred eEEEeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 95 LNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
++|||||++.|||.+++.. +..+...+.+.++.||++|++||++++ ++||||-..||||+.+ +.+||+|||+++.
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~-~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDED-LVVKISDFGLARL 352 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccC-ceEEEcccccccc
Confidence 9999999999999999987 577999999999999999999999999 9999999999999999 8999999999995
Q ss_pred cCCc--cccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 173 VGRS--HAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 173 ~~~~--~~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..+. ...........|.|||.+. +.++.+|||||||++||||+| |+.|+++.... +..+.+.++..... +..+|
T Consensus 353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~~~le~GyRlp~-P~~CP 430 (468)
T KOG0197|consen 353 IGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVLELLERGYRLPR-PEGCP 430 (468)
T ss_pred cCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHHHHHhccCcCCC-CCCCC
Confidence 4432 2233344567999999665 669999999999999999999 99999885554 45556666655544 45579
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+.+.+++..||+ +|++|||++.+.. +++.+.
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~--~l~~~~ 462 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLRE--VLEDFF 462 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHH--HHHHhh
Confidence 999999999998 9999999998776 554443
No 91
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-45 Score=301.21 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=214.9
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc-eEEeeeeEEeCC----
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY-IIVCYSVWLDDQ---- 91 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~---- 91 (289)
.|. ..++||+|+||+||+|.++.+|+.||+|+++..... +..-....+|+.+++.|+|+| |+.+++++...+
T Consensus 12 ~~~-~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 12 DYE-KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHH-HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 343 367799999999999999999999999999876532 233455678999999999999 999999886653
Q ss_pred CCeeEEEeccccCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHR----HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
...+++|+||++. .|..++.... .++...+..+++|++.||+|||+++ ++||||||+|++++.+ |.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~-G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSS-GVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCC-CcEeeecc
Confidence 2378999999977 9999998754 5777899999999999999999999 9999999999999998 99999999
Q ss_pred CCccccCCccc-cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--CC
Q 022956 168 GFAAIVGRSHA-AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--QA 242 (289)
Q Consensus 168 g~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~ 242 (289)
|+|....-+.. ......|..|.|||++-+. |+...||||+|||++||++++.-|++..+.++...+...-..| ..
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 99997764443 4455678899999966544 9999999999999999999999999877766655443322111 11
Q ss_pred CCC-------------------------CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 243 LNK-------------------------VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 243 ~~~-------------------------~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
++. ..++...+++.+||+ +|.+|.|++.+|.||||.......++
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~ 314 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQ 314 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhh
Confidence 111 112477899999999 99999999999999999998665543
No 92
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.7e-46 Score=309.17 Aligned_cols=252 Identities=34% Similarity=0.595 Sum_probs=207.3
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|+||+||++.++.+++.||+|++..... .........+|+.++++++||||+++++.+... ...+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~v 76 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNIVQILDVFQDD--NYLYIV 76 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--SEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc--cccccchhhhhhhcccccccccccccccccccc--cccccc
Confidence 4789999999999999999999999999999987643 222333445699999999999999999988664 678999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCcc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~ 177 (289)
||++.+++|.+++.....+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+... ....
T Consensus 77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDEN-GEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTT-SEEEESSGTTTEESTSTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccccccc
Confidence 999999999999997788999999999999999999999999 9999999999999987 89999999999763 3333
Q ss_pred ccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHhCCCCCC-CCCCCCChHH
Q 022956 178 AAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECD---SVAKIYKKVTGGVKPQ-ALNKVKDPEV 251 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~ 251 (289)
......++..|+|||... ...+.++|+||||+++++|++|..||.... ................ ......++.+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHH
Confidence 445567889999999876 448999999999999999999999998762 1222222221111111 1111124899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+++..||+ ||++||+++++++||||
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999998 99999999999999998
No 93
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.5e-44 Score=304.98 Aligned_cols=263 Identities=29% Similarity=0.501 Sum_probs=216.6
Q ss_pred eCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 12 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 12 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
+.+.++| ++.++||+|+||.||+|.+..++..+++|.+... .....+.+.+|+++++.++|+|++++++.+..+
T Consensus 8 ~~~~~~y-~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 81 (292)
T cd06644 8 LDPNEVW-EIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD- 81 (292)
T ss_pred cCcchhh-hhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-
Confidence 3456666 7899999999999999999999999999999753 455577788999999999999999999987554
Q ss_pred CCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+.+++||||+++++|..++.+ ...+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++
T Consensus 82 -~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~ 157 (292)
T cd06644 82 -GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLD-GDIKLADFGVS 157 (292)
T ss_pred -CeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCC-CCEEEccCccc
Confidence 579999999999999888754 456899999999999999999999999 9999999999999988 89999999988
Q ss_pred cccCCc-cccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 171 AIVGRS-HAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 171 ~~~~~~-~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
...... .......+++.|+|||.+. ..++.++|+||||+++|+|++|..||..........+...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T cd06644 158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQ 237 (292)
T ss_pred eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCC
Confidence 654322 1223345778999999763 226778999999999999999999997755444444433332222233
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+...+..+.+++.+||. ||++||+++++++||||..+.++.
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 279 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence 44567889999999998 999999999999999999887764
No 94
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.1e-45 Score=314.47 Aligned_cols=258 Identities=20% Similarity=0.326 Sum_probs=208.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||++.++.+++.||+|++...... .....+.+.+|..++..++|+||+.+++.+... +.+++||
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~ 80 (331)
T cd05597 4 EILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-KRAETACFREERDVLVNGDRRWITNLHYAFQDE--NNLYLVM 80 (331)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC--CeEEEEE
Confidence 6899999999999999999999999999999753221 233456688899999999999999999887543 6899999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+.|++|.+++.+ ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKN-GHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCC-CCEEEEECCceeecCCCCC
Confidence 99999999999976 567999999999999999999999999 9999999999999988 8999999999876543322
Q ss_pred --cccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--CCCCCCCC
Q 022956 179 --AHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--QALNKVKD 248 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 248 (289)
.....+++.|+|||.+. +.++.++|+|||||++|+|++|+.||................... .......+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 237 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVS 237 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCC
Confidence 22346899999999765 236789999999999999999999998755444433333322111 11122368
Q ss_pred hHHHHHHHHHHc-C--CCCCCCHHHHhcCcccccCCCC
Q 022956 249 PEVKAFIEKCIA-Q--PRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 249 ~~~~~li~~~l~-d--p~~Rps~~~il~h~~~~~~~~~ 283 (289)
+.+++++++||. + +..|+++++++.||||.+.+|.
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~ 275 (331)
T cd05597 238 EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWD 275 (331)
T ss_pred HHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHH
Confidence 899999999986 3 3348899999999999987654
No 95
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-44 Score=326.26 Aligned_cols=260 Identities=27% Similarity=0.457 Sum_probs=215.2
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
...++| ++.++||+|+||+||++.+..+|+.||+|++..... .+.....+.+|+..+..++|+++++++..+.....
T Consensus 29 ~~~~rY-~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 29 EQAKKY-WISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred ccCCCE-EEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 445666 689999999999999999999999999999986544 45556778899999999999999998876643221
Q ss_pred ------CeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcE
Q 022956 93 ------NTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 162 (289)
Q Consensus 93 ------~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~ 162 (289)
..+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.+ +.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~-~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSN-GLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCC-CCE
Confidence 147899999999999998864 356899999999999999999999999 9999999999999998 899
Q ss_pred EEeccCCccccCCc---cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC
Q 022956 163 KIGDLGFAAIVGRS---HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 163 ~l~d~g~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~ 238 (289)
||+|||++...... .......|++.|+|||.+.+. ++.++||||||+++|+|++|..||.+..........+....
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY 262 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999998765432 123345689999999987654 89999999999999999999999987554443333333322
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
. ..+...++.+.+++.+||+ ||++||++.+++.|||++..
T Consensus 263 ~--~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 263 D--PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred C--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 2 2345578999999999998 99999999999999998764
No 96
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-44 Score=315.41 Aligned_cols=251 Identities=26% Similarity=0.453 Sum_probs=203.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||+|+||+||++.+..+|+.||+|++.... .......+.+|+++++.++|+||+++++++.. ++.+++|+
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 151 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDH--NGEIQVLL 151 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--CCeEEEEE
Confidence 46789999999999999999999999999996432 34556778999999999999999999998744 46799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-c
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-A 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-~ 178 (289)
||+++++|.+. ...++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++....... .
T Consensus 152 e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSA-KNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEcccccceeccccccc
Confidence 99999998653 33567888999999999999999999 9999999999999998 899999999997664322 2
Q ss_pred cccCCCCCCCCCCccccc-----C-CCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhCCCCCCCCCCCCChH
Q 022956 179 AHSIIGTPEYMAPELYEE-----D-YTEMVDIYSFGLCLLEMVTMEIPYSECDS--VAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~-----~-~~~~~Di~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
.....++..|+|||.+.. . .+.++|||||||++|+|++|+.||..... .......+.... ........+..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 303 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-PPEAPATASRE 303 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-CCCCCCccCHH
Confidence 234568999999997642 2 45689999999999999999999974322 122222222221 22234456889
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+++||.+||+ ||++||++.|+++||||..-...
T Consensus 304 l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~ 337 (353)
T PLN00034 304 FRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG 337 (353)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence 9999999998 99999999999999999987433
No 97
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-44 Score=337.94 Aligned_cols=265 Identities=24% Similarity=0.438 Sum_probs=221.6
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
..++| ++.++||+|+||+||+|.++.++..+|+|++..... .......+..|+.+++.++||||+++++.+......
T Consensus 11 ~l~~Y-eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l--~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 11 RLNEY-EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL--KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccCCE-EEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 33455 789999999999999999999999999999986544 344567789999999999999999999998877667
Q ss_pred eeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCceecCCCCCceEEeCC------
Q 022956 94 TLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHE-----PCIIHRDLNCSNIFINGN------ 158 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~-----~~~~h~dl~~~nili~~~------ 158 (289)
.+++||||+++++|.+++.. ...+++..++.|+.||+.||.|||+.+ .+++|+||+|+|||++.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 89999999999999999875 357999999999999999999999843 239999999999999642
Q ss_pred ----------CCcEEEeccCCccccCCccccccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 022956 159 ----------IGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECD 225 (289)
Q Consensus 159 ----------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~ 225 (289)
.+.++|+|||++.............+++.|+|||.+.+ .+++++||||||||+|+|++|..||....
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 24599999999987654444445578999999997642 37889999999999999999999998776
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 226 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
........+...... .....+..+.+||..||. +|.+||++.|+|.|+|++.+...
T Consensus 248 ~~~qli~~lk~~p~l--pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 248 NFSQLISELKRGPDL--PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred cHHHHHHHHhcCCCC--CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence 666666666554322 223457899999999998 99999999999999999977543
No 98
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-44 Score=317.71 Aligned_cols=259 Identities=19% Similarity=0.283 Sum_probs=209.9
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
.-|++.+.||+|+||.||++.++.+++.+|+|++...... .......+.+|..+++.++||||+++++.+.. +..++
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~~~ 119 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQD--DRYLY 119 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCEEE
Confidence 3447899999999999999999999999999999754321 22334567889999999999999999988754 36899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||||++|++|.+++... .+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++......
T Consensus 120 lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~-~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 120 MVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCC-CCEEEEeCCceeEcCcC
Confidence 999999999999998764 5899999999999999999999999 9999999999999988 89999999999766433
Q ss_pred c--ccccCCCCCCCCCCccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-CCCCCCC
Q 022956 177 H--AAHSIIGTPEYMAPELYEE-----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ-ALNKVKD 248 (289)
Q Consensus 177 ~--~~~~~~~~~~~~aPE~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 248 (289)
. ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||.................... ......+
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 275 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCC
Confidence 2 2234568999999997653 267899999999999999999999987554444444333222111 1123468
Q ss_pred hHHHHHHHHHHcC-CCC--CCCHHHHhcCcccccCCC
Q 022956 249 PEVKAFIEKCIAQ-PRA--RPSASELLKDPFFSELND 282 (289)
Q Consensus 249 ~~~~~li~~~l~d-p~~--Rps~~~il~h~~~~~~~~ 282 (289)
+.+++++..||.+ +.+ |++++++++||||++..+
T Consensus 276 ~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~ 312 (371)
T cd05622 276 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 312 (371)
T ss_pred HHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence 8999999999984 333 789999999999988654
No 99
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.5e-44 Score=303.92 Aligned_cols=261 Identities=30% Similarity=0.541 Sum_probs=216.5
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
.|.++| ++.++||+|++|.||++.+..++..+|+|.+... .....+.+.+|++++++++|+|++++++.+...
T Consensus 2 ~~~~~~-~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 74 (280)
T cd06611 2 NPNDIW-EIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-- 74 (280)
T ss_pred CchhHH-HHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC--
Confidence 455666 6899999999999999999889999999999754 344567788999999999999999999988544
Q ss_pred CeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
..+++||||+++++|.+++.+ ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~-~~~~l~d~g~~~ 151 (280)
T cd06611 75 NKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLD-GDVKLADFGVSA 151 (280)
T ss_pred CeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCC-CCEEEccCccch
Confidence 678999999999999999876 357999999999999999999999999 9999999999999988 899999999887
Q ss_pred ccCCccc-cccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC
Q 022956 172 IVGRSHA-AHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN 244 (289)
Q Consensus 172 ~~~~~~~-~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
....... .....+++.|+|||.+. ..++.++|+||||+++|+|++|..||.................+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (280)
T cd06611 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQP 231 (280)
T ss_pred hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCc
Confidence 6543222 22345788999999653 2367789999999999999999999987655554444433322222334
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
...+..+.+++..||+ +|++||+++++++||||++...+
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 271 (280)
T cd06611 232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDN 271 (280)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchh
Confidence 4567899999999998 99999999999999999987543
No 100
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-44 Score=305.78 Aligned_cols=252 Identities=28% Similarity=0.392 Sum_probs=198.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH---hCCCCceEEeeeeEEeC---CCC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLR---TLKNKYIIVCYSVWLDD---QHN 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~---~l~~~~i~~~~~~~~~~---~~~ 93 (289)
++.+.||+|+||+||+|.++.+|+.||+|.++....... ....+.+|+.+++ .++||||+++++++... ...
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 3 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG--LPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred eEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC--CchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 678999999999999999999999999999976432211 1123344555554 45799999999887542 235
Q ss_pred eeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 94 TLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.+++++|++.+ +|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSG-GQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccCccc
Confidence 68999999986 888888753 35899999999999999999999999 9999999999999988 899999999998
Q ss_pred ccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC--CC--------
Q 022956 172 IVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--KP-------- 240 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~~-------- 240 (289)
............++..|+|||.+.+ .++.++|||||||++++|++|..||.+............... ..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 7654444445567889999997654 489999999999999999999999976554433333221100 00
Q ss_pred --------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 --------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 --------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......++.+++++.+||+ ||++|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00112346788999999998 99999999999999998
No 101
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-45 Score=314.97 Aligned_cols=256 Identities=28% Similarity=0.504 Sum_probs=223.1
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+.| -+.+++|.|+||.+++++++.+++.|++|.+...... +..++...+|+.+++++.||||+...+.|...+ ..+
T Consensus 4 ~~Y-e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t--~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~-~~l 79 (426)
T KOG0589|consen 4 DNY-EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT--EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG-QLL 79 (426)
T ss_pred chh-hhhhhcCccccchhhhhhhccCCceEEEEEEeccccC--chhhHHHHHHHHHHHhccCCCeeeeccchhcCC-ceE
Confidence 455 5799999999999999999999999999999988763 344558899999999999999999999986643 459
Q ss_pred EEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 96 NFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
+|||+||+||+|.+.+.+. ..++++.+..|+.|++.|+.|||+++ ++|||||+.|||++.+ +.|+|.|||+++..
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~-~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKD-KKVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhcccc-Cceeecchhhhhhc
Confidence 9999999999999999753 57899999999999999999999999 9999999999999999 78999999999999
Q ss_pred CCcc-ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 174 GRSH-AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 174 ~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
+... ...+..||+.|++||++.+. |..++|||||||++|||++-+.+|...+-..-..++.... ....+...+.++
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el 234 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSEL 234 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHH
Confidence 8776 66778899999999988866 9999999999999999999999998755444444444443 233566678999
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+.|++.||. +|..||++.++|.+|.+...
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999999998 99999999999999887743
No 102
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.4e-45 Score=317.40 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=202.9
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC---CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL---KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
||+|+||+||+|.++.+|+.||+|++....... ......+..|..++..+ +||+|+.++..+... +.+++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--SDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--CeEEEEEcC
Confidence 799999999999999999999999997543322 22233445566666554 699999999887544 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-ccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SHAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~~~~ 180 (289)
+++++|..++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++..... .....
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDAT-GHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEecCCcCcCCCCCCCCcc
Confidence 999999999988888999999999999999999999999 9999999999999998 8999999999875432 22334
Q ss_pred cCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
..++++.|+|||.+.+ .++.++|||||||++|+|++|..||........ ...+..+.. .......++.+++++.+|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM-YRNIAFGKV-RFPKNVLSDEGRQFVKGL 232 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH-HHHHHcCCC-CCCCccCCHHHHHHHHHH
Confidence 5678999999997653 378999999999999999999999987544433 333333221 122334688999999999
Q ss_pred Hc-CCCCCC----CHHHHhcCcccccCCC
Q 022956 259 IA-QPRARP----SASELLKDPFFSELND 282 (289)
Q Consensus 259 l~-dp~~Rp----s~~~il~h~~~~~~~~ 282 (289)
|+ ||++|| +++++++||||++.++
T Consensus 233 L~~~P~~R~~~~~~~~~ll~h~~~~~~~~ 261 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKEHPFFADIDW 261 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence 98 999998 7999999999998754
No 103
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4e-44 Score=299.80 Aligned_cols=253 Identities=26% Similarity=0.438 Sum_probs=213.1
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||.|++|.||++.+..++..+|+|++...... .....+.+.+|+++++.++|||++++++.+... ..+++++||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEecCCC
Confidence 79999999999999999999999999765432 234457799999999999999999999987543 679999999999
Q ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccCCC
Q 022956 105 GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIG 184 (289)
Q Consensus 105 ~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 184 (289)
++|.+++.+...+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+.............+
T Consensus 78 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~-~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSN-GYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCC-CCEEEeeCCcccccCcccccccccC
Confidence 999999988778999999999999999999999999 9999999999999988 8999999999987755433444567
Q ss_pred CCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-C
Q 022956 185 TPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECD-SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-Q 261 (289)
Q Consensus 185 ~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-d 261 (289)
++.|++||.+.+ .++.++|+||||+++|+|++|..||.... +.......+.........+...++.+++++.+||. +
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCC
Confidence 889999997654 48899999999999999999999998755 12333333332222333344458899999999998 9
Q ss_pred CCCCCC-----HHHHhcCcccccCCCC
Q 022956 262 PRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 262 p~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
|++||+ ++|+++||||++.+|+
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 999999 9999999999998875
No 104
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.6e-44 Score=306.04 Aligned_cols=256 Identities=22% Similarity=0.377 Sum_probs=209.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||+||++.+..+++.||+|.+...... .......+.+|+.+++.++|++++.+.+.+... +.+++||
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~ 79 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETK--DALCLVL 79 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC--CEEEEEE
Confidence 4678999999999999999999999999998765432 223345577899999999999999999887543 6899999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeccceeecCCCc
Confidence 999999999988643 35899999999999999999999999 9999999999999988 899999999987654443
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSV---AKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
......++..|+|||.+.+. ++.++|+||||+++|+|++|..||...... ......... . ........++.+++
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 234 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-V-QEEYSEKFSPDARS 234 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-h-hhhcCccCCHHHHH
Confidence 33445788999999976544 889999999999999999999999864321 111111111 1 11234456889999
Q ss_pred HHHHHHc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 254 FIEKCIA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 254 li~~~l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
|+.+||+ ||++||| +++++.||||++++++
T Consensus 235 li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 235 LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred HHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHH
Confidence 9999999 9999999 8999999999987654
No 105
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.1e-44 Score=299.46 Aligned_cols=254 Identities=33% Similarity=0.581 Sum_probs=211.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS-EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|+||.||++.+..++..|++|.+...... ........+.+|+.++++++|||++++++.+.......++++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 5789999999999999999999999999998765432 123456678999999999999999999998766555788999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
+||+++++|.+++.....+++.....++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~-~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 85 MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCCCccccccccc
Confidence 999999999999988778999999999999999999999999 9999999999999988 899999999987543211
Q ss_pred ---ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 ---AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ---~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
......++..|+|||.+.+. ++.++|+||||+++++|++|+.||................ .....+...++.+++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-TNPQLPSHISEHARD 240 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC-CCCCCchhcCHHHHH
Confidence 11223467899999977654 8899999999999999999999998766555555443332 233345556888999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
++. ||. +|++||++++|+.||||+
T Consensus 241 li~-~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 241 FLG-CIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHH-HhcCChhhCcCHHHHhcCcccc
Confidence 994 665 999999999999999986
No 106
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.1e-44 Score=309.50 Aligned_cols=254 Identities=21% Similarity=0.322 Sum_probs=209.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|+||+||+|.++.+|+.||+|++...... .....+.+..|..++..+.| ++++++++.+... +.+++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv 79 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV--DRLYFV 79 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCchhheeeEEecC--CEEEEE
Confidence 5789999999999999999999999999999864322 22334567778888888865 5666777766443 579999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-c
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-H 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~-~ 177 (289)
|||++|++|.+++.....+++.++..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++...... .
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~-~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeccccccccCCCCc
Confidence 999999999999988888999999999999999999999999 9999999999999988 89999999998754322 2
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
......+++.|+|||.+.+. ++.++|+||||+++|+|++|..||.+............... ..+...++.+.+++.
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~ 233 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV---SYPKSLSKEAVSICK 233 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCccCCHHHHHHHH
Confidence 23345689999999976654 88999999999999999999999987655444444333222 234456889999999
Q ss_pred HHHc-CCCCCCC-----HHHHhcCcccccCCC
Q 022956 257 KCIA-QPRARPS-----ASELLKDPFFSELND 282 (289)
Q Consensus 257 ~~l~-dp~~Rps-----~~~il~h~~~~~~~~ 282 (289)
+||+ +|.+|++ .+++++||||+.++|
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 9998 9999997 479999999999876
No 107
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.1e-44 Score=321.97 Aligned_cols=251 Identities=25% Similarity=0.416 Sum_probs=210.5
Q ss_pred cceeeeecccCcceEEEEeecCC-CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE-GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
|.+.+.||.|++|.||+|.+..+ +..+|+|.+... .......+.+|+.+++.++||||+++++.+... +.+++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~l 142 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSD--DKLLL 142 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--CEEEE
Confidence 57899999999999999998877 788999877543 344456788899999999999999999988554 68999
Q ss_pred EeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 98 ITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
||||++|++|.+++.. ..++++..+..++.|++.||.|||+++ ++|+||||+||+++.+ +.++|+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~-~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPT-GIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCC-CcEEEEeCcCceec
Confidence 9999999999988753 456899999999999999999999999 9999999999999988 89999999999876
Q ss_pred CCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 174 GRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 174 ~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
..... ....+|++.|+|||.+.+. ++.++|||||||++++|++|..||.................. ..+...++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~s~ 297 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--PFPCPVSS 297 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCccCCH
Confidence 43322 3345689999999977655 899999999999999999999999876554444444443332 23445688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.+++++..||. ||++||++++++.|+|++..
T Consensus 298 ~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 298 GMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 99999999998 99999999999999998753
No 108
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.6e-44 Score=303.16 Aligned_cols=262 Identities=28% Similarity=0.477 Sum_probs=216.8
Q ss_pred eeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe
Q 022956 10 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD 89 (289)
Q Consensus 10 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 89 (289)
...++..+| ++.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+|++++++.+..
T Consensus 14 ~~~~~~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~ 88 (296)
T cd06654 14 SVGDPKKKY-TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLV 88 (296)
T ss_pred ccCCcccce-eeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc----chHHHHHHHHHHHHhCCCCCEeeEEEEEEe
Confidence 445677777 578999999999999999999999999999986543 224668889999999999999999998765
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
. ...++|+||+++++|.+++.+ ..+++.++..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 89 ~--~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~-~~~kl~dfg~ 162 (296)
T cd06654 89 G--DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGF 162 (296)
T ss_pred C--CEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCC-CCEEECcccc
Confidence 4 579999999999999999875 45899999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 170 AAIVGRSHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
+........ .....+++.|+|||.+.+. +++++|+||||+++++|++|..||......................+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T cd06654 163 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242 (296)
T ss_pred chhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCcccc
Confidence 876543222 2234678899999977654 88999999999999999999999987655444443333332222234456
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+..+.+++.+||. ||++||++.+++.||||.....
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 7889999999998 9999999999999999987643
No 109
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.4e-44 Score=306.24 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=205.7
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
.+| ++.++||+|+||+||++.++.++..+|+|.++...... ....+.+|+.++++++|||++++++.+... +..
T Consensus 6 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 79 (309)
T cd07872 6 ETY-IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG---APCTAIREVSLLKDLKHANIVTLHDIVHTD--KSL 79 (309)
T ss_pred Cce-EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC---cchhHHHHHHHHHhCCCCCcceEEEEEeeC--CeE
Confidence 445 67899999999999999999999999999997654321 234566799999999999999999988554 579
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++||||+++ +|.+++.. +..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 80 TLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKS 155 (309)
T ss_pred EEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECccccceecC
Confidence 999999987 78877765 345899999999999999999999999 9999999999999988 899999999987654
Q ss_pred Cccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CC----------
Q 022956 175 RSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VK---------- 239 (289)
Q Consensus 175 ~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~---------- 239 (289)
.... .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||.+....+......... ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred CCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 3222 233457889999997653 37889999999999999999999998755433322221100 00
Q ss_pred --------CC-------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 240 --------PQ-------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 240 --------~~-------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+. ......++++++|+.+||+ ||.+|||++|++.||||+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 00 0112357789999999999 9999999999999999998753
No 110
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.9e-43 Score=294.79 Aligned_cols=251 Identities=27% Similarity=0.536 Sum_probs=208.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||.|++|.||.+.++.+++.+|+|.+..... .....+.+.+|++++++++|+|++++++.+.. ....++++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~lv 78 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEG-EDGLLYIV 78 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC-CCCEEEEE
Confidence 3689999999999999999999999999999976443 33445678899999999999999999887643 33578999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.. ...+++.++..++.+++.++.+||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~-~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRT-NIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecC-CcEEEecccceEEeccc
Confidence 999999999999876 346899999999999999999999999 9999999999999988 89999999999766432
Q ss_pred c-ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 177 H-AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 177 ~-~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
. ......+++.|+|||...+. ++.++|+||||++++++++|..||............ ..+..+ ..+...++.+.++
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l 233 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRI-IEGKLP-PMPKDYSPELGEL 233 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcCCC-CCccccCHHHHHH
Confidence 2 22334578899999976654 888999999999999999999999865544433333 333222 2344578899999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCccc
Q 022956 255 IEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+.+||+ ||++||++.++++||||
T Consensus 234 i~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 234 IATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHhccCcccCCCHHHHhcCCCC
Confidence 999998 99999999999999997
No 111
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-44 Score=315.59 Aligned_cols=256 Identities=25% Similarity=0.384 Sum_probs=206.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC---CCeeE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ---HNTLN 96 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 96 (289)
.+.++||+|+||.||++.+..+|+.||+|++..... +....+++.+|+.+++.++|+||+++++++.... ...++
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 468899999999999999999999999999864321 3344567889999999999999999999875432 12689
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+|+||+.+ +|.+.+.....+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 81 lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSN-CVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCC-CCEEeccccceeecccC
Confidence 99999975 88888887788999999999999999999999999 9999999999999998 89999999999765432
Q ss_pred c--ccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh-----------------
Q 022956 177 H--AAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT----------------- 235 (289)
Q Consensus 177 ~--~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----------------- 235 (289)
. ......+++.|+|||.+.+. ++.++|||||||++++|++|+.||.+............
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 2 12234568899999976643 78899999999999999999999986554333221111
Q ss_pred -----C-CCCCC------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 236 -----G-GVKPQ------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 236 -----~-~~~~~------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
. ...+. ......++.+.+|+.+||+ ||++|||++++|.||||++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 1 11110 1123347889999999999 999999999999999999853
No 112
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.4e-44 Score=311.41 Aligned_cols=258 Identities=20% Similarity=0.342 Sum_probs=209.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||.||++.++.+++.+|+|++...... .......+.+|..++..++|++++++++.+... ..+++||
T Consensus 4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~ 80 (332)
T cd05623 4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGDNQWITTLHYAFQDE--NNLYLVM 80 (332)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CEEEEEE
Confidence 6889999999999999999999999999999753221 223345578899999999999999999887544 6799999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+++++|.+++.+ ...+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~-~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEeecchheecccCCc
Confidence 99999999999986 467899999999999999999999999 9999999999999988 8999999999875533222
Q ss_pred --cccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC--CCCCCCC
Q 022956 179 --AHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ--ALNKVKD 248 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 248 (289)
.....|++.|+|||.+. +.++.++|+|||||++|+|++|+.||.................... ......+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s 237 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVS 237 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCC
Confidence 22356899999999764 2378899999999999999999999987655554444443322111 1123468
Q ss_pred hHHHHHHHHHHc-CCC--CCCCHHHHhcCcccccCCCC
Q 022956 249 PEVKAFIEKCIA-QPR--ARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~--~Rps~~~il~h~~~~~~~~~ 283 (289)
+.+++|+.+||. +++ .|++++++++||||.+++|+
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~ 275 (332)
T cd05623 238 EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWD 275 (332)
T ss_pred HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHH
Confidence 899999999996 443 37899999999999998764
No 113
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-43 Score=303.79 Aligned_cols=255 Identities=29% Similarity=0.487 Sum_probs=209.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|+||.||++.+..++..+|+|.+.... .......+.+|++++++++||||+++++.+... +.++++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 77 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD--GEISIC 77 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--CEEEEE
Confidence 368999999999999999999999999999987532 344566788999999999999999999988654 689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+||+++++|.+++.+...+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecC-CcEEEccCCCccccccc-
Confidence 9999999999999988889999999999999999999997 58 9999999999999988 89999999998655332
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---------------------
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--------------------- 235 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--------------------- 235 (289)
......++..|+|||.+.+. ++.++|+||||+++++|++|..||..... ........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPD 232 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hhHHHhhcCccccccccCCcccccCCCCC
Confidence 22345678899999977654 88899999999999999999999965332 11111111
Q ss_pred ---------------CCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 236 ---------------GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 236 ---------------~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
....+.......+.++++++.+||. ||++||++.+++.||||.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 296 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE 296 (308)
T ss_pred ccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence 1111111122357789999999998 99999999999999999986444
No 114
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-45 Score=286.86 Aligned_cols=264 Identities=21% Similarity=0.372 Sum_probs=227.8
Q ss_pred CCCceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeee
Q 022956 6 GEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYS 85 (289)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 85 (289)
+.+.......+.+ .+++.||.|-||.||+|..++++-.||+|++...... .......+.+|+++.+.|+||||+++++
T Consensus 12 ~~~~~~~~~l~df-eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~-~~~v~~qlrREiEIqs~L~hpnilrlY~ 89 (281)
T KOG0580|consen 12 GSRATKTWTLDDF-EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQIL-KTQVEHQLRREIEIQSHLRHPNILRLYG 89 (281)
T ss_pred ccccccccchhhc-cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHH-HhcchhhhhheeEeecccCCccHHhhhh
Confidence 3333344445555 5799999999999999999999999999999876542 3344567899999999999999999999
Q ss_pred eEEeCCCCeeEEEeccccCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 86 VWLDDQHNTLNFITEVCTSGNLRTYRK--KHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 86 ~~~~~~~~~~~lv~e~~~~~sL~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
+|.++ ..+|+++||...|+|...+. ...++++.....+..|++.|+.|+|.++ ++||||+|+|+|++.+ +.+|
T Consensus 90 ~fhd~--~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~-~~lk 164 (281)
T KOG0580|consen 90 YFHDS--KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSA-GELK 164 (281)
T ss_pred heecc--ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCC-CCee
Confidence 98766 57999999999999999999 5678999999999999999999999999 9999999999999999 8999
Q ss_pred EeccCCccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 164 IGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 164 l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
++|||-+.... .+.....|||..|.|||...+. .+...|+|++|++.|+++.|..||.+.. ..+.++.+.+.. ..
T Consensus 165 iAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~--~~ 240 (281)
T KOG0580|consen 165 IADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD--LK 240 (281)
T ss_pred ccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc--cc
Confidence 99999988776 5567788999999999977765 8999999999999999999999998755 555566555532 33
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.+..++.++++||..|+. +|.+|....|++.|||+...
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 457789999999999998 99999999999999998754
No 115
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.8e-43 Score=296.42 Aligned_cols=256 Identities=32% Similarity=0.551 Sum_probs=212.5
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS-EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
+++.++||+|+||.||.+.+..+|..||+|.+...... ......+.+.+|+.++++++|||++++++.+.+.....+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 36799999999999999999999999999998754322 22345678899999999999999999999876554567889
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS- 176 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~- 176 (289)
++||+++++|.+++.....+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSV-GNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCC-CCEEECcCcccccccccc
Confidence 9999999999999988778999999999999999999999999 9999999999999988 89999999998755321
Q ss_pred ---cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 ---HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ---~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.......++..|+|||.+.+. ++.++|+||||+++|+|++|+.||..........+..... .....+...+..+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-TNPVLPPHVSDHCR 239 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC-CCCCCchhhCHHHH
Confidence 112234577899999976544 8899999999999999999999998765555554433322 22333445677899
Q ss_pred HHHHHHHcCCCCCCCHHHHhcCcccc
Q 022956 253 AFIEKCIAQPRARPSASELLKDPFFS 278 (289)
Q Consensus 253 ~li~~~l~dp~~Rps~~~il~h~~~~ 278 (289)
+++.+|+.+|++||++++++.|||+.
T Consensus 240 ~~i~~~l~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 240 DFLKRIFVEAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcChhhCCCHHHHhcCcccC
Confidence 99999999999999999999999974
No 116
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.3e-44 Score=302.38 Aligned_cols=254 Identities=24% Similarity=0.453 Sum_probs=215.0
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|++|.||++.+..+++.+|+|++...... .....+.+.+|++++++++||||+++++.+... +.++++
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v 79 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-KLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD--SNLYLV 79 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC--CeEEEE
Confidence 36799999999999999999999999999999754331 233457788999999999999999999988554 679999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+++++|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSD-GYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCC-CCEEEeeCCCccccCCC--
Confidence 999999999999998888999999999999999999999999 9999999999999988 89999999998776544
Q ss_pred cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....+++.|+|||.+.+ ..+.++|+||||+++++|++|..||....... ..+.+..+.. ..+...++.+++++.+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~li~~ 231 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-IYEKILEGKV--RFPSFFSPDAKDLIRN 231 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCc--cCCccCCHHHHHHHHH
Confidence 334467889999997654 47889999999999999999999998755333 3333333221 2334458899999999
Q ss_pred HHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 258 CIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 258 ~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
||. ||.+|+ ++++++.||||+.++|.
T Consensus 232 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 232 LLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred HccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 998 999999 99999999999998753
No 117
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=289.12 Aligned_cols=255 Identities=22% Similarity=0.240 Sum_probs=205.6
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC---
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD--- 90 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 90 (289)
.+++.|++.+.||+|+|+-||++++..++..||+|++.+.. .+..+...+|++..++++|||+++++++...+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 45556699999999999999999999999999999999874 44578889999999999999999998766532
Q ss_pred CCCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
.....|++++|+..|||.+.++. +..+++.++++|+.+++.||.+||...++++|+||||.||++.+. +.+++.|
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~-~~~vl~D 172 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS-GLPVLMD 172 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC-CceEEEe
Confidence 33578999999999999999874 457999999999999999999999999999999999999999987 8999999
Q ss_pred cCCccccCCccc----------cccCCCCCCCCCCcccccC----CCCcchHHHHHHHHHHHHhCCCCCCCCCcH--HHH
Q 022956 167 LGFAAIVGRSHA----------AHSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKI 230 (289)
Q Consensus 167 ~g~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~--~~~ 230 (289)
||.+....-.-. ......+..|.|||.+.-+ .+.++|||||||++|.|+.|..||...-.. ...
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla 252 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA 252 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence 999986532111 1123468899999987633 788999999999999999999999531000 000
Q ss_pred HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 231 YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
......... .......++.+.+++++||+ ||.+||++.+++.+
T Consensus 253 LAv~n~q~s-~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 253 LAVQNAQIS-IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred Eeeeccccc-cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 001111111 11223378999999999999 99999999999874
No 118
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1e-43 Score=299.36 Aligned_cols=256 Identities=29% Similarity=0.512 Sum_probs=214.3
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.+.||+|++|.||++.+..+++.+|+|.+.... .......+.+|+++++.++|+|++++++.+... ..++
T Consensus 2 ~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (274)
T cd06609 2 LF-TLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKLW 75 (274)
T ss_pred hh-hhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeEE
Confidence 45 57899999999999999999999999999997543 233356688899999999999999999987655 6899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+|+||+++++|.+++... ++++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 76 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEE-GDVKLADFGVSGQLTST 151 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEcccccceeeccc
Confidence 999999999999999875 7999999999999999999999999 9999999999999998 89999999999877544
Q ss_pred -cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 177 -HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 177 -~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
.......+++.|+|||.+.+. ++.++|+||||+++|+|++|..||....... ....+.....+.......++.+.++
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-VLFLIPKNNPPSLEGNKFSKPFKDF 230 (274)
T ss_pred ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-HHHHhhhcCCCCCcccccCHHHHHH
Confidence 223344677889999976654 8999999999999999999999997655433 3333333333333222278899999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 255 IEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+.+||. ||++||++++++.||||.+....
T Consensus 231 l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 231 VSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred HHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 999998 99999999999999999886544
No 119
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3e-44 Score=312.14 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=207.0
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.+.||+|+||+||+|.+..++..||+|++..... .......+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 13 VPERY-QNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhh-hhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 34566 678999999999999999999999999999975432 2233556778999999999999999998764321
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...++++++++ +++|.+++.. ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~ 164 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-CELRILDFGL 164 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCC-CCEEEcCCcc
Confidence 13578899988 6689888764 56999999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CC------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VK------ 239 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~------ 239 (289)
+...... .....+++.|+|||.+.+ .++.++|||||||++++|++|..||.+.............. ..
T Consensus 165 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 165 ARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9865432 234568899999997755 37889999999999999999999998654433322221110 00
Q ss_pred -------------C-------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 240 -------------P-------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 240 -------------~-------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+ .......++.+.+|+.+||. ||++|||+.+++.||||.......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~ 308 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE 308 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence 0 00011245678999999999 999999999999999999875543
No 120
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.2e-44 Score=305.24 Aligned_cols=263 Identities=28% Similarity=0.479 Sum_probs=216.1
Q ss_pred eeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe
Q 022956 10 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD 89 (289)
Q Consensus 10 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 89 (289)
...++.++| ++.+.||+|++|.||++.+..++..||+|.+..... ...+.+.+|+.+++.++|+|++++++.+..
T Consensus 13 ~~~~~~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 87 (297)
T cd06656 13 SVGDPKKKY-TRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLV 87 (297)
T ss_pred ccCChhhhc-eeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 344677777 679999999999999999999999999999975432 224567889999999999999999998854
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
. ...++|+||+++++|.+++.+ ..+++.++..++.|++.+|.+||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 88 ~--~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~-~~~~l~Dfg~ 161 (297)
T cd06656 88 G--DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGF 161 (297)
T ss_pred C--CEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEECcCcc
Confidence 4 679999999999999999875 45899999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 170 AAIVGRSHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
+........ .....+++.|+|||.+.+. +++++|+||||++++++++|..||...............+.+....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (297)
T cd06656 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERL 241 (297)
T ss_pred ceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCcccc
Confidence 876543322 2234578899999976654 88999999999999999999999976554433332222222332334556
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+..+++++.+||. +|++||++++++.||||+.....
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 7889999999998 99999999999999999876543
No 121
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.1e-44 Score=308.75 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=205.1
Q ss_pred eeeeeccc--CcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 21 YSDLLGSG--AVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 21 ~~~~lg~g--~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+.++||+| +|++||++.++.+|+.||+|.+..... .....+.+.+|+.+++.++||||+++++.+... +..++|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv 77 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVV 77 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEE
Confidence 56789999 678999999999999999999976533 344566788899999999999999999988655 578999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++++||+........
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~-~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecC-CcEEEcccchhhccccc
Confidence 999999999999975 345899999999999999999999999 9999999999999988 89999999865433211
Q ss_pred cc--------cccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-----
Q 022956 177 HA--------AHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP----- 240 (289)
Q Consensus 177 ~~--------~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----- 240 (289)
.. .....++..|+|||.+.+ .++.++|||||||++++|++|..||.................+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccccc
Confidence 11 112245677999997753 37899999999999999999999997644333332222211100
Q ss_pred --------------------------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 241 --------------------------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 241 --------------------------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.......++.+.+|+.+||+ ||++|||++++++||||+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00111235689999999999 999999999999999999886
Q ss_pred CCCCC
Q 022956 282 DDDSE 286 (289)
Q Consensus 282 ~~~~~ 286 (289)
..+..
T Consensus 315 ~~~~~ 319 (327)
T cd08227 315 RRASE 319 (327)
T ss_pred hhhhh
Confidence 55443
No 122
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.7e-44 Score=321.04 Aligned_cols=254 Identities=21% Similarity=0.302 Sum_probs=196.4
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCC------ceEEeeeeEEe
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK------YIIVCYSVWLD 89 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~ 89 (289)
++| ++.++||+|+||+||+|.+..+++.||||+++... .....+..|+++++.++|. +++.++.++..
T Consensus 129 ~~y-~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 129 QRF-KILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CcE-EEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 444 78999999999999999999999999999997421 2234455677777766554 47777776654
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCC--------
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIG-------- 160 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~-------- 160 (289)
. ...+++|++++ |++|.+++.+.+.+++..+..++.|++.||.|||+ .| ++|+||||+||+++.+ +
T Consensus 203 ~-~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~-~~~~~~~~~ 277 (467)
T PTZ00284 203 E-TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETS-DTVVDPVTN 277 (467)
T ss_pred C-CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecC-Ccccccccc
Confidence 3 35789999998 56899999888889999999999999999999997 59 9999999999999865 3
Q ss_pred --------cEEEeccCCccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 022956 161 --------QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIY 231 (289)
Q Consensus 161 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~ 231 (289)
.+||+|||.+..... ......+++.|+|||++.+. ++.++|||||||++|+|++|+.||.+........
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred cccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 499999998764322 22345789999999977654 8999999999999999999999998755443322
Q ss_pred HHHhC--CCC-----------------------CC--------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHH
Q 022956 232 KKVTG--GVK-----------------------PQ--------------ALNKVKDPEVKAFIEKCIA-QPRARPSASEL 271 (289)
Q Consensus 232 ~~~~~--~~~-----------------------~~--------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~i 271 (289)
..... ..+ +. ......++.+.+||.+||+ ||++|||++|+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 11110 000 00 0001124567899999999 99999999999
Q ss_pred hcCcccccCCC
Q 022956 272 LKDPFFSELND 282 (289)
Q Consensus 272 l~h~~~~~~~~ 282 (289)
|+||||.+...
T Consensus 436 L~Hp~~~~~~~ 446 (467)
T PTZ00284 436 TTHPYVLKYYP 446 (467)
T ss_pred hcCccccccCC
Confidence 99999998644
No 123
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-43 Score=299.54 Aligned_cols=254 Identities=29% Similarity=0.474 Sum_probs=211.2
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|+||.||++.+..++..+++|.+... .....+.+.+|+++++.++|+|++++++.+... +..++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CEEEEE
Confidence 47789999999999999999999999999998643 344567788899999999999999999988554 578999
Q ss_pred eccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-
Q 022956 99 TEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS- 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~- 176 (289)
+||+++++|..++.. ..++++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccC-CCEEEccccccccccccc
Confidence 999999999888764 467999999999999999999999999 9999999999999988 89999999998654322
Q ss_pred cccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 177 HAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
.......+++.|+|||.+. ..++.++|+||||+++|+|++|..||......................+...+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSE 237 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHH
Confidence 1223345788999999763 2377899999999999999999999987655554444433333222334456889
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+++++.+||+ ||++||+++++++||||+...
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 9999999998 999999999999999998653
No 124
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-43 Score=296.74 Aligned_cols=253 Identities=30% Similarity=0.486 Sum_probs=209.7
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC--CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS--EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
|++.+.||+|+||.||++.+ .+|..+|+|.++..... ........+.+|+..+++++|+|++++++.+... ..++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 78 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--NTIS 78 (265)
T ss_pred ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC--CeEE
Confidence 36789999999999999986 47899999998765421 1234456789999999999999999999987544 6899
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR- 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~- 175 (289)
+++||+++++|.+++.+...+++..+..++.|++.||++||+.+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPN-GIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCC-CeEEeccchhhHhhhhc
Confidence 99999999999999988778999999999999999999999999 9999999999999988 8999999999875421
Q ss_pred ------ccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 176 ------SHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 176 ------~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
........++..|+|||.+.+. ++.++|+||||+++++|++|..||......................+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCC
Confidence 1112234578899999977655 788999999999999999999999876555444433333222233455678
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
..+.+++++||+ +|++||++.+++.||||
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 899999999998 99999999999999997
No 125
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-43 Score=295.67 Aligned_cols=252 Identities=31% Similarity=0.570 Sum_probs=209.9
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.| .+.++||+|++|.||++.+..++..+++|.+.... ..+.+.+|++++++++|+|++++++.+... .
T Consensus 1 ~~~~y-~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~ 71 (256)
T cd06612 1 PEEVF-DILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKN--T 71 (256)
T ss_pred Ccccc-hhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecC--C
Confidence 35666 57999999999999999999889999999997432 267899999999999999999999988654 6
Q ss_pred eeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
.+++++|++++++|.+++.. ...+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~-~~~~l~dfg~~~~ 148 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEE-GQAKLADFGVSGQ 148 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCC-CcEEEcccccchh
Confidence 79999999999999999975 467899999999999999999999999 9999999999999988 8999999999987
Q ss_pred cCCcc-ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 173 VGRSH-AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 173 ~~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
..... ......++..|+|||.+.+. ++.++|+||||+++++|++|..||......................+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd06612 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPE 228 (256)
T ss_pred cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHH
Confidence 65443 22334577899999976654 88899999999999999999999987554433333222212222223345788
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+.+++..||+ ||++||++.+++.||||
T Consensus 229 ~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 229 FNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 9999999998 99999999999999997
No 126
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-43 Score=301.55 Aligned_cols=257 Identities=28% Similarity=0.513 Sum_probs=215.0
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+..+| ++.+.||+|++|+||++.+..+|+.|++|.+..... ...+.+.+|+..++.++|||++.+++.+... .
T Consensus 17 ~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~ 89 (296)
T cd06655 17 PKKKY-TRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKELKNPNIVNFLDSFLVG--D 89 (296)
T ss_pred CcceE-EEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhcCCCceeeeeeeEecC--c
Confidence 45555 679999999999999999999999999999975432 2246678899999999999999999988544 6
Q ss_pred eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 94 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.+++|+||+++++|..++... .+++.++..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~-~~~kl~dfg~~~~~ 165 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMD-GSVKLTDFGFCAQI 165 (296)
T ss_pred eEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccchhc
Confidence 799999999999999988764 5899999999999999999999999 9999999999999988 89999999998765
Q ss_pred CCccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 174 GRSHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 174 ~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
..... .....++..|+|||.+.+. ++.++|+||||+++|++++|..||......................+...++.+
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIF 245 (296)
T ss_pred ccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHH
Confidence 43322 2334578899999976644 889999999999999999999999876655554444333333333445568899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.+++.+||. ||++||++.+++.||||+...
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 999999998 999999999999999998754
No 127
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-43 Score=293.89 Aligned_cols=249 Identities=30% Similarity=0.555 Sum_probs=209.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|++|.||++.++.+++.|++|.+..... .......+.+|+++++.++|||++++++.+... +..++|+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (256)
T cd08529 3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLDK--GKLNIVM 78 (256)
T ss_pred eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeeccC--CEEEEEE
Confidence 568899999999999999999999999999976543 344567789999999999999999999987544 6899999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~-~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAY-DNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCC-CCEEEcccccceeccCcc
Confidence 999999999999764 57899999999999999999999999 9999999999999998 899999999987664432
Q ss_pred c-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 A-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
. .....+++.|+|||...+. ++.++|+||||+++++|++|..||............ ..+..+. .....+..+.+++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~i 233 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI-IRGVFPP-VSQMYSQQLAQLI 233 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HcCCCCC-CccccCHHHHHHH
Confidence 2 2334578899999976544 889999999999999999999999876544433333 3332222 2335688999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+||+ +|++||++.++++|||+
T Consensus 234 ~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 234 DQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHccCCcccCcCHHHHhhCCCC
Confidence 99998 99999999999999996
No 128
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.7e-44 Score=301.27 Aligned_cols=258 Identities=21% Similarity=0.345 Sum_probs=210.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+..+.||+|+||+||++.+..+++.+|+|.+...... .......+.+|+++++.++|++++.+.+.+.. ++..++++
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLVL 79 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEEE
Confidence 4678899999999999999999999999999764332 22334557789999999999999999887744 36899999
Q ss_pred ccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+.+++|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDY-GHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCC-CCEEEecCCcceecCCCC
Confidence 99999999988864 346999999999999999999999999 9999999999999988 899999999987654433
Q ss_pred ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-CCCCCCCCChHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li 255 (289)
......++..|+|||.+.+ .++.++|+||||+++++|++|..||.................. ........++.+.+|+
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSIC 236 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHH
Confidence 3344568899999997654 4889999999999999999999999875443322222111111 1223445678999999
Q ss_pred HHHHc-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 256 EKCIA-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 256 ~~~l~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
..||+ ||++||+ +.+++.|+||++..++
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred HHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 99998 9999999 8999999999988554
No 129
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.4e-44 Score=309.07 Aligned_cols=249 Identities=27% Similarity=0.426 Sum_probs=200.4
Q ss_pred CcccceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEe
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLD 89 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 89 (289)
++| ++.++||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.++..+ +||||+++++.+..
T Consensus 7 ~~~-~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 7 DRL-RLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred hHc-eeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 455 7899999999999999974 3446789999997432 234456788999999999 89999999997754
Q ss_pred CCCCeeEEEeccccCCcHHHHHHhc-------------------------------------------------------
Q 022956 90 DQHNTLNFITEVCTSGNLRTYRKKH------------------------------------------------------- 114 (289)
Q Consensus 90 ~~~~~~~lv~e~~~~~sL~~~~~~~------------------------------------------------------- 114 (289)
. +..++++|||+++++|.+++...
T Consensus 83 ~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 83 P-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred C-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 3 35689999999999999998642
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc---cccCCC
Q 022956 115 -------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIG 184 (289)
Q Consensus 115 -------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~ 184 (289)
.++++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++........ .....+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCC-CcEEEeecccccccccCcchhcccCCCC
Confidence 24778889999999999999999999 9999999999999988 8999999999976532211 122334
Q ss_pred CCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-C
Q 022956 185 TPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-Q 261 (289)
Q Consensus 185 ~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-d 261 (289)
++.|+|||.+.+ .++.++||||||+++|+|++ |..||.+..........+..+..+. .+...++.+.+++.+||+ |
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~d 317 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR-APENATPEIYRIMLACWQGD 317 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHccCC
Confidence 678999997654 48999999999999999997 9999987554444444444443322 345678899999999998 9
Q ss_pred CCCCCCHHHHhc
Q 022956 262 PRARPSASELLK 273 (289)
Q Consensus 262 p~~Rps~~~il~ 273 (289)
|++|||+.++++
T Consensus 318 p~~RPs~~el~~ 329 (338)
T cd05102 318 PKERPTFSALVE 329 (338)
T ss_pred hhhCcCHHHHHH
Confidence 999999999987
No 130
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.3e-43 Score=293.98 Aligned_cols=250 Identities=26% Similarity=0.446 Sum_probs=212.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||++.++.++..+|+|.+..... .......+.+|+++++.++|||++++++.+.. ++..++|+
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 3 EKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred eEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 679999999999999999999999999999986544 33446789999999999999999999987744 36799999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++... ..+++..+..++.+++.++.+||++| ++|+||+|+||+++.+.+.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 999999999999763 45899999999999999999999999 99999999999998764678999999998776554
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
......++..|+|||.+.+. ++.++|+||||+++++|++|..||.................. ......++.+++++.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~ 234 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA--PISDRYSPDLRQLIL 234 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC--CCCCCcCHHHHHHHH
Confidence 44456678899999977654 788999999999999999999999876554444444333222 234456889999999
Q ss_pred HHHc-CCCCCCCHHHHhcCccc
Q 022956 257 KCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.||. +|++|||+.++++||||
T Consensus 235 ~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHccCChhhCCCHHHHhhCCCC
Confidence 9998 99999999999999997
No 131
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3e-43 Score=294.42 Aligned_cols=251 Identities=28% Similarity=0.517 Sum_probs=213.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||.|+||.||++.+..+|..+|+|.+..... .....+.+.+|+++++.++|+|++++++.+....+...++++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 3 EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred eeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 578999999999999999999999999999976544 345567788999999999999999999887766667889999
Q ss_pred ccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 100 EVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLH-----THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 100 e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh-----~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
||+++++|.+++.. ..++++..+..++.|++.||.+|| +.+ ++|+||+|+||+++.+ +.++|+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~-~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDAN-NNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecC-CCEEEeccccc
Confidence 99999999999865 467899999999999999999999 888 9999999999999988 89999999999
Q ss_pred cccCCccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 171 AIVGRSHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 171 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
........ .....+++.|+|||.+.+. ++.++|+||||+++++|++|..||.... .....+.+..... ...+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 235 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKF-RRIPYRYS 235 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCC-CCCccccC
Confidence 87754433 3345678899999976644 7889999999999999999999998755 3444444444332 23455678
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
..+.+++.+||. +|++||++.+|++|||+
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 899999999998 99999999999999996
No 132
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.5e-43 Score=297.83 Aligned_cols=254 Identities=28% Similarity=0.518 Sum_probs=207.8
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|+||.||++.+..++..+|+|.+.... .......+.+|++++++++|||++++++.+... +..++|
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 77 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRISIC 77 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEEEE
Confidence 367899999999999999999999999999997542 334456788999999999999999999988665 578899
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+++++|..+ ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++...... .
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~-~~~~l~dfg~~~~~~~~-~ 149 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTR-GQVKLCDFGVSTQLVNS-I 149 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCC-CCEEEeeCCcceecccc-c
Confidence 999999998654 34788999999999999999999999 9999999999999998 89999999999765433 2
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHhCCCCCCCCCCCCChHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSV------AKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
.....++..|+|||.+.+. ++.++|+||||+++|+|++|..||...... ......+.....+.......++.+
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHH
Confidence 2335688899999976544 889999999999999999999999642211 122222222222333334467899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
++++.+||+ +|++||++++++.||||...+....
T Consensus 230 ~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 230 VHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred HHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 999999998 9999999999999999998865543
No 133
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1e-43 Score=309.97 Aligned_cols=266 Identities=26% Similarity=0.375 Sum_probs=211.1
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.+.||+|+||.||+|.+..+|..||+|.+..... +......+.+|++++++++|+|++++++.+....
T Consensus 14 ~~~~y-~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 14 VLKRY-QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhcce-EEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc
Confidence 34566 678999999999999999999999999999864322 3344566778999999999999999998875332
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
....++|+||+.+ +|.+.+... +++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 91 ~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~-~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCcc
Confidence 2357999999976 888887654 899999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-------- 240 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 240 (289)
+.............++..|+|||.+.+ .++.++|+|||||++++|++|+.||...+........+.....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 987655444444567889999997654 48999999999999999999999998654433222221110000
Q ss_pred ------------------------C--------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 241 ------------------------Q--------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 241 ------------------------~--------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
. ......++.+++++.+||+ ||++||++.++|.||||+.+....+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~~ 324 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEVE 324 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccCC
Confidence 0 0011235678999999999 999999999999999999876655444
Q ss_pred C
Q 022956 288 S 288 (289)
Q Consensus 288 ~ 288 (289)
.
T Consensus 325 ~ 325 (353)
T cd07850 325 A 325 (353)
T ss_pred C
Confidence 3
No 134
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.4e-44 Score=309.54 Aligned_cols=258 Identities=19% Similarity=0.326 Sum_probs=209.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||.||++.++.+++.||+|++...... .......+.+|..++..++|++|+.+++.+... +..|+||
T Consensus 4 ~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~--~~~~lv~ 80 (331)
T cd05624 4 EIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAETACFREERNVLVNGDCQWITTLHYAFQDE--NYLYLVM 80 (331)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CEEEEEE
Confidence 6899999999999999999999999999999753321 233355688899999999999999999887543 6899999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||++|++|.+++.. ...+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMN-GHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCC-CCEEEEeccceeeccCCCc
Confidence 99999999999986 467999999999999999999999999 9999999999999988 8999999999876543322
Q ss_pred --cccCCCCCCCCCCccccc------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC--CCCCCCC
Q 022956 179 --AHSIIGTPEYMAPELYEE------DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ--ALNKVKD 248 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~~------~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 248 (289)
.....+++.|+|||.+.+ .++.++|+||||+++|+|++|..||.................... ......+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~ 237 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVS 237 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCC
Confidence 223468999999997653 478899999999999999999999987554444433333221111 1122357
Q ss_pred hHHHHHHHHHHc-CCCC--CCCHHHHhcCcccccCCCC
Q 022956 249 PEVKAFIEKCIA-QPRA--RPSASELLKDPFFSELNDD 283 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~--Rps~~~il~h~~~~~~~~~ 283 (289)
+.+++++.+||. ++++ |++++++++||||+..+|.
T Consensus 238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 238 EEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred HHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence 899999999997 4443 5799999999999987653
No 135
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-43 Score=304.39 Aligned_cols=259 Identities=24% Similarity=0.388 Sum_probs=214.4
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|++|+||+|.+..+++.+|+|.+...... .....+.+.+|++.++.++|+|++++++.+.. ....+++
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 79 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQT--ETYLCLV 79 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeec--CCEEEEE
Confidence 36789999999999999999999999999999865432 23356778999999999999999999988744 3689999
Q ss_pred eccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+.+++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHES-GHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCC-CCEEEeecchhhccccc
Confidence 9999999999998753 57899999999999999999999999 9999999999999988 89999999998654321
Q ss_pred cc------------------------------cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 022956 177 HA------------------------------AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD 225 (289)
Q Consensus 177 ~~------------------------------~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~ 225 (289)
.. .....++..|+|||.+.+. ++.++||||||+++|+|++|..||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 1123467889999976544 8889999999999999999999998766
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCC----HHHHhcCcccccCCCCC
Q 022956 226 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPS----ASELLKDPFFSELNDDD 284 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps----~~~il~h~~~~~~~~~~ 284 (289)
................ .....++.+++++.+||. ||++||+ +++++.||||++.+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 237 RDETFSNILKKEVTFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred hHHHHHHHhcCCccCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhh
Confidence 5555544443322211 122268999999999998 9999999 99999999999987654
No 136
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.5e-43 Score=297.07 Aligned_cols=252 Identities=26% Similarity=0.497 Sum_probs=207.8
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
.++| ++.++||+|+||.||+|.+..+++.||+|.++... ......+.+|+.+++.++|||++++++.+... +.
T Consensus 8 ~~~~-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~--~~ 80 (267)
T cd06645 8 QEDF-ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR--DK 80 (267)
T ss_pred HHHH-HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CE
Confidence 3455 67899999999999999999999999999997542 22345678899999999999999999988554 67
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++++||+++++|.+++...+.+++.++..++.|++.|+.|||+.| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDN-GHVKLADFGVSAQIT 157 (267)
T ss_pred EEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECcceeeeEcc
Confidence 8999999999999999988888999999999999999999999999 9999999999999988 899999999987554
Q ss_pred Ccc-ccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC--CCC
Q 022956 175 RSH-AAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN--KVK 247 (289)
Q Consensus 175 ~~~-~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 247 (289)
... ......++..|+|||.+. +.++.++|+|||||++|+|++|..||..................+.... ...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKW 237 (267)
T ss_pred CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCC
Confidence 322 223346788999999753 3478899999999999999999999976554444333333322222221 134
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcc
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~ 276 (289)
+..+.+++.+||+ +|++||++++++.|||
T Consensus 238 ~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 238 SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 6789999999998 9999999999999998
No 137
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.8e-43 Score=295.37 Aligned_cols=251 Identities=30% Similarity=0.530 Sum_probs=209.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC-----HHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-----PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
.+.+.||+|++|.||+|.+..++..+|+|.+........ ....+.+.+|+.++++++|||++++++.+... ..
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 80 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA--DH 80 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--Cc
Confidence 578999999999999999998999999999876543222 23446788999999999999999999987554 57
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
.++++||+++++|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNK-GGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCC-CCEEecccCCCcccc
Confidence 8999999999999999998888999999999999999999999999 9999999999999988 899999999987664
Q ss_pred Cccc-------cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCC
Q 022956 175 RSHA-------AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 175 ~~~~-------~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
.... .....++..|+|||.+.+. ++.++|+||||+++++|++|+.||.............. ... ...+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~-~~~~~~ 235 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-NAS-PEIPSN 235 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-cCC-CcCCcc
Confidence 2111 1123467889999976644 88899999999999999999999987655444443322 222 223445
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+..+.+++++||+ ||++||++.++++||||
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 68899999999999 99999999999999997
No 138
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-43 Score=297.81 Aligned_cols=255 Identities=25% Similarity=0.518 Sum_probs=210.0
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 91 (289)
++.++| ++.+.||+|+||.||+|.++.+++.+|+|.+..... ....+.+|+.+++.+ +|+|++++++.+....
T Consensus 3 ~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (272)
T cd06637 3 DPAGIF-ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 76 (272)
T ss_pred Chhhhh-hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence 567887 578999999999999999999999999999975432 135677899999988 6999999999886532
Q ss_pred ----CCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEe
Q 022956 92 ----HNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 165 (289)
Q Consensus 92 ----~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~ 165 (289)
...+++++||+.+++|.+++... ..+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+ +.++|+
T Consensus 77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~-~~~~l~ 153 (272)
T cd06637 77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLV 153 (272)
T ss_pred CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCC-CCEEEc
Confidence 24689999999999999998863 46899999999999999999999999 9999999999999988 899999
Q ss_pred ccCCccccCCc-cccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC
Q 022956 166 DLGFAAIVGRS-HAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 166 d~g~~~~~~~~-~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~ 238 (289)
|||++...... .......++..|+|||.+. ..++.++|+||||+++|+|++|..||............. ...
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~-~~~ 232 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RNP 232 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh-cCC
Confidence 99998765432 2233456788999999764 237889999999999999999999997655444443332 222
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.........+..+++|+.+||. ||.+||++.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 2333344567899999999998 99999999999999997
No 139
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.2e-44 Score=298.99 Aligned_cols=252 Identities=31% Similarity=0.563 Sum_probs=211.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|++|.||++.++.+++.+++|.+.... .......+.+|++++++++|||++++++.+... +.+++++
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~ 78 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI---NEAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDISICM 78 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc---ChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEEEEEE
Confidence 56889999999999999999999999999997653 234567788999999999999999999887554 6899999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++... ..+++..+..++.|++.|+.+||+ .| ++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~-~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSR-GQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCC-CCEEEeecccchhhHHHH
Confidence 999999999999876 789999999999999999999999 89 9999999999999998 899999999987654332
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCC----CcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.. ...++..|+|||.+.+. ++.++|+||||+++++|++|..||... .......+.......+.......++.++
T Consensus 156 ~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06605 156 AK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQ 234 (265)
T ss_pred hh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence 22 25678899999976554 889999999999999999999999764 2233333334443333333333688999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
++|.+||. ||++||++.+++.||||++.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 99999998 99999999999999999875
No 140
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.3e-43 Score=297.51 Aligned_cols=256 Identities=25% Similarity=0.466 Sum_probs=208.0
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
...+.+.| ++.++||+|+||.||+|.++.+++.+|+|++..... .....+.+|+.++++++|||++++++.+...
T Consensus 4 ~~~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 4 RRNPQHDY-ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred ccCchhhc-chhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 44556666 689999999999999999999999999999975432 2245678899999999999999999988554
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
..+++|+||+++++|.+++.....+++..+..++.|++.|+.|||+.| ++|+|++|+||+++.+ +.++|+|||++
T Consensus 79 --~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~ 153 (267)
T cd06646 79 --EKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDN-GDVKLADFGVA 153 (267)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEECcCccc
Confidence 578999999999999999988788999999999999999999999999 9999999999999988 89999999999
Q ss_pred cccCCcc-ccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC--
Q 022956 171 AIVGRSH-AAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL-- 243 (289)
Q Consensus 171 ~~~~~~~-~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 243 (289)
....... ......++..|+|||.+. ..++.++|+||||+++++|++|+.||..................+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06646 154 AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKD 233 (267)
T ss_pred eeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcc
Confidence 7654322 223345778999999653 337789999999999999999999997544333322222222121111
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcc
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~ 276 (289)
....+..+.+++..||. +|++||+++++++|+|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 22357899999999998 9999999999999987
No 141
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.6e-43 Score=296.47 Aligned_cols=256 Identities=26% Similarity=0.490 Sum_probs=209.7
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 91 (289)
.+.++| ++.+.||+|++|.||+|.++.++..+++|++.... ...+.+.+|+.+++++ +|+|++++++.+....
T Consensus 3 ~~~~~y-~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (275)
T cd06608 3 DPTGIF-ELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKN 76 (275)
T ss_pred Cchhhe-eheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecC
Confidence 456777 68999999999999999999999999999987543 2346788999999999 7999999999886533
Q ss_pred ----CCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 92 ----HNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 92 ----~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
...+++|+||+++++|.+++.. +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++
T Consensus 77 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~-~~~~ 153 (275)
T cd06608 77 PPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKN-AEVK 153 (275)
T ss_pred CCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccC-CeEE
Confidence 4568999999999999998864 357899999999999999999999999 9999999999999988 8999
Q ss_pred EeccCCccccCCcc-ccccCCCCCCCCCCccccc------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC
Q 022956 164 IGDLGFAAIVGRSH-AAHSIIGTPEYMAPELYEE------DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 236 (289)
Q Consensus 164 l~d~g~~~~~~~~~-~~~~~~~~~~~~aPE~~~~------~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 236 (289)
|+|||++....... ......++..|+|||.+.. .++.++|+||||+++++|++|..||..........+....
T Consensus 154 l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 233 (275)
T cd06608 154 LVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN 233 (275)
T ss_pred ECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc
Confidence 99999987654322 2234457889999996542 2677899999999999999999999865544444443333
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 237 GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
...........+..+++++.+||. ||++|||+.++++|||+
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 234 PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 222222222356789999999998 99999999999999996
No 142
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-43 Score=303.37 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=191.6
Q ss_pred eeeecccCcceEEEEeec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 22 SDLLGSGAVKKVYRAFDQ--EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.++||+|+||+||+|.++ .++..+|+|.+..... ...+.+|++++++++||||+++++.+....+..+++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 578999999999999865 4678999999875432 23467799999999999999999988766667899999
Q ss_pred ccccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe---CCCCcEEEecc
Q 022956 100 EVCTSGNLRTYRKKH---------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN---GNIGQVKIGDL 167 (289)
Q Consensus 100 e~~~~~sL~~~~~~~---------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~---~~~~~~~l~d~ 167 (289)
||+.+ +|.+++... ..+++..+..++.|++.||.|||+.| ++|+||||+||+++ ...+.+||+||
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 99966 888887532 25899999999999999999999999 99999999999994 22378999999
Q ss_pred CCccccCCcc----ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------HHHHH
Q 022956 168 GFAAIVGRSH----AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV---------AKIYK 232 (289)
Q Consensus 168 g~~~~~~~~~----~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------~~~~~ 232 (289)
|++....... ......+++.|+|||.+.+ .++.++|+|||||++++|++|+.||...... .....
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 236 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHH
Confidence 9997664322 1234567899999997654 3788999999999999999999999643211 11110
Q ss_pred HHhC--CCC-------------------------C--------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcc
Q 022956 233 KVTG--GVK-------------------------P--------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 233 ~~~~--~~~-------------------------~--------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~ 276 (289)
.... ... . .......++.+.+|+.+||+ ||++|||++|+|+|||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07868 237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 316 (317)
T ss_pred HHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 0000 000 0 00011235678899999999 9999999999999999
Q ss_pred c
Q 022956 277 F 277 (289)
Q Consensus 277 ~ 277 (289)
|
T Consensus 317 f 317 (317)
T cd07868 317 F 317 (317)
T ss_pred C
Confidence 8
No 143
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7e-44 Score=301.78 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=199.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||+|.++.+|+.+|+|.++.... .......+.+|+.+++.++|+|++++++.+.+. ..+++++
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLYDVLHSD--KKLTLVF 78 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cccCccchhHHHHHHHhcCCCCeeeHHHHhccC--CceEEEE
Confidence 578999999999999999999999999999976432 222335677899999999999999999988544 5799999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+++ +|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCC-CcEEECccchhhccCCCCC
Confidence 99976 78777754 567999999999999999999999999 9999999999999988 8999999999876543322
Q ss_pred -cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC---------------CC
Q 022956 179 -AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV---------------KP 240 (289)
Q Consensus 179 -~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---------------~~ 240 (289)
.....+++.|+|||.+.+. ++.++|+||||+++++|++|..|+............+.+.. ..
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2234567899999976543 68899999999999999999888644333332222211100 00
Q ss_pred ------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 ------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 ------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......++.+++++.+||+ ||.+|||+++++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 01112357889999999998 99999999999999998
No 144
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.1e-42 Score=290.16 Aligned_cols=249 Identities=28% Similarity=0.498 Sum_probs=211.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||.+.+..++..+++|.+..... +......+.+|++++++++|+|++++++.+... ..+++++
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~~~ 78 (256)
T cd08221 3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL--SEKERRDALNEIVILSLLQHPNIIAYYNHFMDD--NTLLIEM 78 (256)
T ss_pred eEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc--chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC--CeEEEEE
Confidence 679999999999999999999999999999976553 344566788999999999999999999988554 6799999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++... ..+++.++..++.|++.++.+||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKA-GLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCC-CCEEECcCcceEEccccc
Confidence 999999999999764 56899999999999999999999999 9999999999999998 899999999987664433
Q ss_pred -ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 -AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 -~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
......+++.|+|||...+. ++.++|+||||+++++|++|..||..................+ .....+..+.+++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i 233 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP--VVSVYSSELISLV 233 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CccccCHHHHHHH
Confidence 23345678899999976654 7889999999999999999999998755555444444433332 2355688999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+||. +|++||+++++++|||+
T Consensus 234 ~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 234 HSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHcccCcccCCCHHHHhhCcCC
Confidence 99998 99999999999999996
No 145
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.9e-43 Score=298.27 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=206.9
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|+||+||+|.+..+|+.||+|.+...... .......+.+|++++++++|||++++++.+.. .+.+|+|+||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCC
Confidence 69999999999999999999999999754322 12234556789999999999999999988744 3679999999999
Q ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccC
Q 022956 105 GNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 182 (289)
Q Consensus 105 ~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~ 182 (289)
++|.+++.+.. .+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+............
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~ 154 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDH-GNVRISDLGLAVELKGGKKIKGR 154 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEccCcchhhhccCCccccc
Confidence 99999997654 7899999999999999999999999 9999999999999988 89999999998766543333445
Q ss_pred CCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 183 IGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSV---AKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 183 ~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
.++..|+|||.+.+. ++.++|+||||+++++|++|+.||...... ......... .+...+...++.+.+++.+|
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~ 232 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEAL 232 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHH
Confidence 577899999976544 888999999999999999999999764431 222221111 22233445689999999999
Q ss_pred Hc-CCCCCC-----CHHHHhcCcccccCCCCC
Q 022956 259 IA-QPRARP-----SASELLKDPFFSELNDDD 284 (289)
Q Consensus 259 l~-dp~~Rp-----s~~~il~h~~~~~~~~~~ 284 (289)
|+ ||++|| ++.+++.||||++++|+.
T Consensus 233 l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 233 LQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred ccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 98 999999 888899999999998854
No 146
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.5e-43 Score=301.20 Aligned_cols=265 Identities=25% Similarity=0.335 Sum_probs=211.6
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
..+.| ++.+.||+|+||.||++.++.+|+.||+|.++..... ......+.+|+.++++++|+|++++++.+.....+
T Consensus 5 ~~~~y-~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (309)
T cd07845 5 SVTEF-EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD 81 (309)
T ss_pred cccce-eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence 44555 6799999999999999999999999999999865432 22223456799999999999999999988766556
Q ss_pred eeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
.+++|+||+.+ +|.+++.. ...+++.++..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+..
T Consensus 82 ~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~kL~dfg~~~~ 157 (309)
T cd07845 82 SIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDK-GCLKIADFGLART 157 (309)
T ss_pred eEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccceeee
Confidence 78999999976 88888875 467899999999999999999999999 9999999999999988 8999999999987
Q ss_pred cCCccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--C------
Q 022956 173 VGRSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--Q------ 241 (289)
Q Consensus 173 ~~~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~------ 241 (289)
...... .....+++.|+|||.+.+ .++.++|+||||+++|+|++|..||..................+ .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 654322 222335778999997654 37889999999999999999999998765554443333211100 0
Q ss_pred ------------C-------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 242 ------------A-------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 242 ------------~-------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
. .....++.+.++|.+||. ||++|||+++++.||||++...+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~ 301 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCE 301 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCC
Confidence 0 001247788999999999 9999999999999999998766543
No 147
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.3e-43 Score=299.52 Aligned_cols=259 Identities=22% Similarity=0.359 Sum_probs=211.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||++.+..+++.|++|.+...... .......+.+|+.+++.++|||++++++.+.. +..+++++
T Consensus 4 ~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 80 (305)
T cd05609 4 ETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLI-LRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCMVM 80 (305)
T ss_pred eEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhh-hHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEEEE
Confidence 6789999999999999999999999999998754321 22345678899999999999999999988744 36899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc--
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-- 177 (289)
||++|++|.+++...+.+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~-~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCC-CCEEEeeCCCccccCcCccc
Confidence 99999999999988888999999999999999999999999 9999999999999988 899999999876321000
Q ss_pred --------------ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 178 --------------AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 178 --------------~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
......++..|+|||.+.+ .++.++|+||||++++++++|..||.+...................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 0112346778999997654 4899999999999999999999999875544333333333322222
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCC---HHHHhcCcccccCCCCC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPS---ASELLKDPFFSELNDDD 284 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps---~~~il~h~~~~~~~~~~ 284 (289)
.....+..+++++.+||+ ||++||+ +.++++||||...+++.
T Consensus 238 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 238 GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHH
Confidence 333568899999999998 9999997 79999999998887654
No 148
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.2e-43 Score=296.23 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=213.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|+||.||+|.++.+++.+|+|++...... .....+.+.+|++++++++|||++++++.+. .+...++|
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 78 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV-EKGSVRNVLNERRILQELNHPFLVNLWYSFQ--DEENMYLV 78 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc-chhHHHHHHHHHHHHHhCCCCChHHHHHhhc--CCCeEEEE
Confidence 36789999999999999999999999999999865432 2345678999999999999999999998874 34689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+.|++|.+++....++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQ-GHVHITDFNIATKVTPDTL 155 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCC-CCEEEeecccccccCCCcc
Confidence 999999999999988778999999999999999999999999 9999999999999998 8999999999887654433
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDS--VAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
.....++..|+|||.+... ++.++|+||||+++++|++|..||..... .....+.... .....+...+..+.+++
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i 233 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAI 233 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHH
Confidence 4445678899999976654 78999999999999999999999987553 3333333332 22334445678999999
Q ss_pred HHHHc-CCCCCCCH--HHHhcCccc
Q 022956 256 EKCIA-QPRARPSA--SELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~--~~il~h~~~ 277 (289)
.+||. ||++||++ ++++.||||
T Consensus 234 ~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 234 NKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHccCChhHcCCccHHHHhcCCCC
Confidence 99998 99999999 999999998
No 149
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.6e-43 Score=297.52 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=202.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||+|.+..++..||+|.++.... .+.....+.+|+.++++++|||++++++.+..+ ..+++|+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~ 78 (285)
T cd07861 3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE--EEGVPSTAIREISLLKELQHPNIVCLQDVLMQE--SRLYLIF 78 (285)
T ss_pred eEeeEecccCceEEEEEEECCCCcEEEEEEeccccc--cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC--CeEEEEE
Confidence 678999999999999999999999999999976432 233346678899999999999999999988654 6789999
Q ss_pred ccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 100 EVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCC-CcEEECcccceeecCCC
Confidence 99985 888887642 56899999999999999999999999 9999999999999988 89999999998765433
Q ss_pred cc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC--------------
Q 022956 177 HA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK-------------- 239 (289)
Q Consensus 177 ~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------- 239 (289)
.. .....+++.|+|||.+.+ .++.++|+||||+++++|++|+.||.+................
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 22 223356789999997654 3688999999999999999999999865544333322111000
Q ss_pred ------------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 ------------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 ------------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
........++++++++.+||. ||++|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 001122357889999999998 99999999999999997
No 150
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.9e-43 Score=290.58 Aligned_cols=253 Identities=34% Similarity=0.600 Sum_probs=217.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||++.+..++..+++|++..... .....+.+.+|++.+++++|+|++++++.+.......+++++
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD--SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 568999999999999999999999999999986543 245578899999999999999999999988665346799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
|++++++|.+++.+...+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSD-GVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEcccccEEeccccccc
Confidence 99999999999998878999999999999999999999999 9999999999999998 8999999999987765543
Q ss_pred --cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 179 --AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
.....++..|+|||...+. .+.++|+||||+++++|++|..||............+.........+...+..+.+++
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFL 237 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHH
Confidence 3445678899999977655 8899999999999999999999998765333333333332333445556689999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+||+ ||++||++.+++.||||
T Consensus 238 ~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 238 RKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHhCcCChhhCCCHHHHhhCCCC
Confidence 99998 99999999999999997
No 151
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.3e-43 Score=294.37 Aligned_cols=255 Identities=27% Similarity=0.473 Sum_probs=208.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCC--CHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE--DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
+..+.||+|++|.||++.+..+++.+|+|++....... .....+.+.+|++++++++|+|++++++.+.. ++.+++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~~ 80 (268)
T cd06630 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DSHFNL 80 (268)
T ss_pred cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CCeEEE
Confidence 56899999999999999999999999999997644221 23356789999999999999999999998844 367899
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
|+||+++++|.+++.+.+++++..+..++.|++.||.+||++| ++|+||+|+||+++.+...++|+|||.+.......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 9999999999999988888999999999999999999999999 99999999999998773469999999987664332
Q ss_pred c-----cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhCCCCCCCCCCCCCh
Q 022956 178 A-----AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSV--AKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 178 ~-----~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
. .....++..|+|||.+.+. ++.++|+||||++++++++|..||...... ................+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCH
Confidence 1 1223567899999976644 888999999999999999999999753321 2222222222223334455688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
.+.+++.+||. +|++||++.+++.||||+
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 99999999998 999999999999999985
No 152
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.1e-43 Score=292.62 Aligned_cols=254 Identities=30% Similarity=0.574 Sum_probs=216.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||+|.+..+++.+++|.+..... ......+.+|++.+++++|+|++++++.+... +.+++++
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~ 78 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD---EEFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GEISIVL 78 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--CeEEEEE
Confidence 578999999999999999999999999999976532 24567899999999999999999999988554 6899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+++++|.+++.....+++..+..++.|++.|+.+||+ .+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~-~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSK-GEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCC-CCEEEccCccceecccCCC
Confidence 999999999999987889999999999999999999999 99 9999999999999998 8999999999987654333
Q ss_pred cc-cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 179 AH-SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD--SVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 179 ~~-~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
.. ...++..|+|||.+... ++.++|+||||+++++|++|..||.... ........+.....+.......++.+.++
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 235 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDF 235 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence 22 34577899999976654 8889999999999999999999998764 44444555444443333333278899999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 255 IEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+.+||. +|++||++.++++||||++.+
T Consensus 236 i~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 236 ISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred HHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 999998 999999999999999998765
No 153
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.1e-43 Score=296.64 Aligned_cols=253 Identities=27% Similarity=0.443 Sum_probs=206.2
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.+.||+|++|.||++.++.+|+.||+|.+..... .....+.+.+|++++++++|+|++++++.+... ..++
T Consensus 2 ~y-~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 76 (286)
T cd07847 2 KY-EKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED--DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK--RKLH 76 (286)
T ss_pred ce-eeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc--CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC--CEEE
Confidence 44 678999999999999999999999999999875432 222345678899999999999999999988554 5789
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+++||+++++|..+......+++..+..++.|++.+|.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 77 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 77 LVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQ-GQIKLCDFGFARILTGP 153 (286)
T ss_pred EEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCC-CcEEECccccceecCCC
Confidence 99999999888888877777999999999999999999999999 9999999999999988 89999999999876543
Q ss_pred c-ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC----------------
Q 022956 177 H-AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---------------- 237 (289)
Q Consensus 177 ~-~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---------------- 237 (289)
. ......++..|+|||.+.+ .++.++|+||||+++++|++|..||.+....+.........
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 3 2223456788999997654 37889999999999999999999998765544433222110
Q ss_pred ------CCCC------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 238 ------VKPQ------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 238 ------~~~~------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
..+. ......+..+.+|+.+||+ ||++||++.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000 0012346789999999998 99999999999999998
No 154
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.1e-43 Score=293.37 Aligned_cols=252 Identities=23% Similarity=0.379 Sum_probs=202.4
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHH-HHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQL-LRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|++|.||+|.+..+|+.||+|.++........ ....+..|... ....+|+|++++++.+.. ++.+++++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN-QVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHH-HHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEec
Confidence 5699999999999999999999999998754332112 22333444443 455689999999988844 3689999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 181 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~ 181 (289)
+++++|.+++.....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++..... ...
T Consensus 79 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~---~~~ 152 (260)
T cd05611 79 LNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQT-GHLKLTDFGLSRNGLE---NKK 152 (260)
T ss_pred cCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEeecccceeccc---ccc
Confidence 999999999988888999999999999999999999999 9999999999999988 8999999998875543 223
Q ss_pred CCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-CCCCCCCCChHHHHHHHHHH
Q 022956 182 IIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK-PQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l 259 (289)
..++..|++||.+.+. ++.++|+||||+++++|++|..||.................. +.......++.+.+++.+||
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 232 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLL 232 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHc
Confidence 4577889999976654 788999999999999999999999875544333332222211 22233356899999999999
Q ss_pred c-CCCCCC---CHHHHhcCcccccCCCC
Q 022956 260 A-QPRARP---SASELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rp---s~~~il~h~~~~~~~~~ 283 (289)
. +|++|| +++|++.||||+++.|+
T Consensus 233 ~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 233 CMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred cCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 8 999999 55899999999999885
No 155
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.1e-43 Score=299.66 Aligned_cols=257 Identities=25% Similarity=0.377 Sum_probs=205.6
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||.||++.++.++..||+|.++..... .....+.+|+..++.++||||+++++.+... +.+
T Consensus 6 ~~y-~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~~ 79 (301)
T cd07873 6 ETY-IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KSL 79 (301)
T ss_pred cce-EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecC--CeE
Confidence 345 6789999999999999999999999999999765322 1234567799999999999999999988544 679
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++|+||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~ 155 (301)
T cd07873 80 TLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKS 155 (301)
T ss_pred EEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCC-CcEEECcCcchhccC
Confidence 999999976 88888765 456899999999999999999999999 9999999999999988 899999999987654
Q ss_pred Cccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC--CCC----------
Q 022956 175 RSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG--GVK---------- 239 (289)
Q Consensus 175 ~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~---------- 239 (289)
.... .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||............... ...
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 156 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence 3222 223456889999997654 3788999999999999999999999875543332211110 000
Q ss_pred --------C-------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 240 --------P-------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 240 --------~-------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
+ .......++.+++||.+||+ ||.+|||+++++.||||..+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 0 00112357789999999999 9999999999999999988763
No 156
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.3e-42 Score=295.20 Aligned_cols=257 Identities=24% Similarity=0.441 Sum_probs=208.5
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 91 (289)
.+.++| .+.+.||+|+||.||++.++.+++.+|+|.+.... .....+.+|+.+++++ +|||++++++.+...+
T Consensus 19 ~~~~~y-~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 19 DPTDTW-EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred CCCCCe-EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 456777 67999999999999999999999999999986432 2245677889999988 8999999999886532
Q ss_pred ---CCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 92 ---HNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 92 ---~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
...+++|+||+++++|.+++.. +..+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~-~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTE-GGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEEE
Confidence 2468999999999999998753 467899999999999999999999999 9999999999999988 89999
Q ss_pred eccCCccccCCcc-ccccCCCCCCCCCCccccc------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC
Q 022956 165 GDLGFAAIVGRSH-AAHSIIGTPEYMAPELYEE------DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 237 (289)
Q Consensus 165 ~d~g~~~~~~~~~-~~~~~~~~~~~~aPE~~~~------~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 237 (289)
+|||.+....... ......++..|+|||.+.. .++.++|+||||+++++|++|..||................
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 249 (291)
T cd06639 170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP 249 (291)
T ss_pred eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence 9999987654322 2233457889999997643 25789999999999999999999998765544444433222
Q ss_pred CCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 238 VKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 238 ~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
......+...+..+.+++.+||+ +|++||++.+++.||||+
T Consensus 250 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 250 PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 22222233456789999999998 999999999999999984
No 157
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.6e-43 Score=291.49 Aligned_cols=252 Identities=27% Similarity=0.512 Sum_probs=209.3
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
.++| ++.+.||+|++|.||+|.+..+++.+++|++.... ....+.+.+|++++++++|||++++++.+... ..
T Consensus 2 ~~~~-~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~ 74 (262)
T cd06613 2 QEDY-ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRR--DK 74 (262)
T ss_pred ccce-EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeC--CE
Confidence 4555 67899999999999999999999999999998653 22467888999999999999999999887554 67
Q ss_pred eEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 95 LNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
++++|||+++++|.+++... ..+++.++..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~ 151 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTED-GDVKLADFGVSAQL 151 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCC-CCEEECccccchhh
Confidence 99999999999999999875 78999999999999999999999999 9999999999999988 89999999998765
Q ss_pred CCcc-ccccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC--CCCC
Q 022956 174 GRSH-AAHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA--LNKV 246 (289)
Q Consensus 174 ~~~~-~~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~ 246 (289)
.... ......++..|+|||...+ .++.++|+||||+++++|++|..||..................+.. ....
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEK 231 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhh
Confidence 4332 2233457788999997643 4788999999999999999999999876655544433333222211 1223
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCcc
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~ 276 (289)
.+..+.+++.+||. +|.+||++.+++.|+|
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 232 WSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 46789999999998 9999999999999998
No 158
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.6e-43 Score=296.03 Aligned_cols=257 Identities=26% Similarity=0.507 Sum_probs=210.0
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEe
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLD 89 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 89 (289)
...+.++| ++.+.||+|+||.||+|.++.+++.+|+|++... ......+..|+.+++++ +|+|++++++.+..
T Consensus 11 ~~~~~~~~-~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 11 LRDPAGIF-ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hcChhhhh-hhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34566777 6789999999999999999999999999998653 22345678899999888 69999999998754
Q ss_pred C----CCCeeEEEeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 90 D----QHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 90 ~----~~~~~~lv~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
. ....++++|||+++++|.+++.. +..+++..+..++.|++.|+.|||+.| ++|+||+|+||+++.+ +.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~-~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTEN-AEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEE
Confidence 2 24678999999999999999875 345888999999999999999999999 9999999999999988 8999
Q ss_pred EeccCCccccCCc-cccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC
Q 022956 164 IGDLGFAAIVGRS-HAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 236 (289)
Q Consensus 164 l~d~g~~~~~~~~-~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 236 (289)
|+|||++...... .......+++.|+|||.+. ..++.++|+||||+++|+|++|..||........... +..
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~-~~~ 240 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL-IPR 240 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh-Hhh
Confidence 9999998765432 2223456788999999654 2377899999999999999999999976554444333 223
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 237 GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
...+.......+..+.+++.+||. ||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 241 NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 333333344568899999999998 99999999999999997
No 159
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-42 Score=290.68 Aligned_cols=251 Identities=34% Similarity=0.625 Sum_probs=209.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|++|.||++.+..++..+++|.++.... .....+.+.+|+.+++.++|+|++++++.... .+.+++|+
T Consensus 3 ~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (264)
T cd06626 3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN--DPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REKVYIFM 78 (264)
T ss_pred eeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc--chHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCEEEEEE
Confidence 679999999999999999998999999999987653 24567889999999999999999999997644 36799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+++++|.+++.....+++..+..++.+++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~-~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHN-GVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEcccccccccCCCCCc
Confidence 99999999999998878999999999999999999999999 9999999999999998 89999999999876433221
Q ss_pred -----ccCCCCCCCCCCcccccC----CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC-CCCCCCh
Q 022956 180 -----HSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-LNKVKDP 249 (289)
Q Consensus 180 -----~~~~~~~~~~aPE~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 249 (289)
....++..|+|||.+.+. ++.++|+||||++++++++|..||............+.....+.. .....++
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCH
Confidence 124577899999976532 688999999999999999999999765444333333333222211 1222488
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+.+++..||+ +|++||++.+++.|||+
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999998 99999999999999996
No 160
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.6e-43 Score=296.01 Aligned_cols=255 Identities=29% Similarity=0.461 Sum_probs=203.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH-HHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQ-LLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|+||.||++.++.+|+.||+|.++.... ... ...+..|.. .++.++|||++++++.+... +.++++
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~--~~~~lv 78 (283)
T cd06617 4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQE-QKRLLMDLDISMRSVDCPYTVTFYGALFRE--GDVWIC 78 (283)
T ss_pred eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecC--CcEEEE
Confidence 578999999999999999999999999999976532 122 233444544 46778999999999988544 578999
Q ss_pred eccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 99 TEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
+||+++ +|.+++.. ...+++..+..++.|++.||.|||++ + ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~-~~~kl~dfg~~~~~ 154 (283)
T cd06617 79 MEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRN-GQVKLCDFGISGYL 154 (283)
T ss_pred hhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCC-CCEEEeeccccccc
Confidence 999975 78777653 35689999999999999999999997 8 9999999999999998 89999999998766
Q ss_pred CCccccccCCCCCCCCCCccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 174 GRSHAAHSIIGTPEYMAPELYEE-----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 174 ~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..........++..|+|||.+.+ .++.++|+||||+++++|++|..||..................+.......+
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFS 234 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccC
Confidence 44333333457788999997653 2678999999999999999999999754332222223333333333344568
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+.+.+++.+||. +|++||++.+++.||||.+....
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence 899999999998 99999999999999999987644
No 161
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1e-42 Score=290.27 Aligned_cols=249 Identities=24% Similarity=0.487 Sum_probs=209.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||.+|.+.+..+|..||+|.+..... .....+.+.+|+.++++++|||++++++.+.. .+..++|+
T Consensus 3 ~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08218 3 VKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEE--NGNLYIVM 78 (256)
T ss_pred eEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CCeEEEEE
Confidence 679999999999999999999999999999986543 33445678999999999999999999988743 46899999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+.+++|.+++... ..+++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++++|||.+.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~-~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD-GTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEEeeccceeecCcch
Confidence 999999999998753 35799999999999999999999999 9999999999999988 899999999997664432
Q ss_pred c-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 A-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
. .....+++.|+|||.+.+. ++.++|+||||+++++|++|..||............+.+.... .+...+..+.+++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li 233 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP--VSSHYSYDLRNLV 233 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC--CcccCCHHHHHHH
Confidence 2 1223467889999976644 8889999999999999999999998765555544444443322 2344688999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+||+ +|++||++.++++||||
T Consensus 234 ~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 234 SQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHhhCChhhCcCHHHHhhCcCC
Confidence 99998 99999999999999997
No 162
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8e-44 Score=321.52 Aligned_cols=257 Identities=21% Similarity=0.345 Sum_probs=210.5
Q ss_pred CceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeee-
Q 022956 8 PFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYS- 85 (289)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~- 85 (289)
.+.....++...++.+.|.+|||+.||+|.+...|..||+|.+-.. ++...+.+.+|++++++|+ |+|||.+++
T Consensus 28 ~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yids 103 (738)
T KOG1989|consen 28 VGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDS 103 (738)
T ss_pred CceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence 3455566777778999999999999999999988899999999765 6778899999999999996 999999999
Q ss_pred eEEeC-C---CCeeEEEeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC
Q 022956 86 VWLDD-Q---HNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI 159 (289)
Q Consensus 86 ~~~~~-~---~~~~~lv~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~ 159 (289)
..... . ...+.|+||||.|++|-|++.+ ..+|++.++++|+.++++|+.+||...+|++|||||-+|||++.+
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~- 182 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD- 182 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC-
Confidence 43322 1 1357889999999999999985 356999999999999999999999999999999999999999999
Q ss_pred CcEEEeccCCccccCCcccc-c---------cCCCCCCCCCCccc---ccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 022956 160 GQVKIGDLGFAAIVGRSHAA-H---------SIIGTPEYMAPELY---EED-YTEMVDIYSFGLCLLEMVTMEIPYSECD 225 (289)
Q Consensus 160 ~~~~l~d~g~~~~~~~~~~~-~---------~~~~~~~~~aPE~~---~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~ 225 (289)
|..||||||.+...-..... . ....|+.|++||.+ ++. .++++|||+|||+||.|+....||....
T Consensus 183 g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg 262 (738)
T KOG1989|consen 183 GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG 262 (738)
T ss_pred CCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc
Confidence 89999999999765332211 1 12468999999943 343 8999999999999999999999998632
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 226 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
. ..++..+..-.. ....+..+++||..||+ ||++||++.|++.+
T Consensus 263 ~----laIlng~Y~~P~-~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 263 K----LAILNGNYSFPP-FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred c----eeEEeccccCCC-CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 2 223333322222 24568899999999999 99999999999983
No 163
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-43 Score=295.21 Aligned_cols=242 Identities=23% Similarity=0.334 Sum_probs=203.3
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe--CCCCeeEEEec
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD--DQHNTLNFITE 100 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~~lv~e 100 (289)
..||+|+++.||++.. +|+.||+|.++.... ......+.+.+|+.++++++||||+++++++.+ .....++++||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 5699999999999987 689999999976532 234556788999999999999999999998876 44467899999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
|+++++|.+++.+...+++.....++.+++.|+.+||+. + ++|+||+|+||+++.+ +.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~-~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTEN-YKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCC-CcEEEcccchHhhhcccc--
Confidence 999999999999888899999999999999999999985 7 8899999999999998 899999999987654322
Q ss_pred ccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
....++..|+|||.+.+ .++.++||||||+++|+|++|..||.+..........+..+..+ ..+...++.+++++.
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~li~ 256 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL-KLPLDCPLEIKCIVE 256 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC-CCCCcCcHHHHHHHH
Confidence 23457889999997754 58999999999999999999999998765444444433333332 233356899999999
Q ss_pred HHHc-CCCCCCCHHHHhc
Q 022956 257 KCIA-QPRARPSASELLK 273 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~ 273 (289)
+||+ ||++|||+++++.
T Consensus 257 ~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHhcCCcccCcCHHHHHH
Confidence 9998 9999999999987
No 164
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.6e-43 Score=294.94 Aligned_cols=251 Identities=24% Similarity=0.432 Sum_probs=205.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||+|.++.+|..+|+|++..... .......+.+|+.++++++|||++++++.+... ..+++|+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~~v~ 78 (286)
T cd07832 3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPHG--SGFVLVM 78 (286)
T ss_pred eEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEecC--CeeEEEe
Confidence 688999999999999999999999999999987543 234456788999999999999999999988553 6899999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+ +++|.+++.. ...+++.++..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISAD-GVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCC-CcEEEeeeeecccccCCCC
Confidence 999 8899999865 467899999999999999999999999 9999999999999998 8999999999887654331
Q ss_pred --cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--------------
Q 022956 179 --AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-------------- 240 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 240 (289)
.....++..|+|||.+.+ .+++++||||||+++++|++|..||.+................+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 233467889999997653 36889999999999999999988887655443333222211100
Q ss_pred -------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 241 -------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 241 -------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
.......+..+.+++.+||+ ||++||++++++.||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00112346889999999998 999999999999999984
No 165
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6.6e-43 Score=295.28 Aligned_cols=252 Identities=23% Similarity=0.395 Sum_probs=199.7
Q ss_pred eecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHH---HHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 24 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEV---QLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~---~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
.||+|+||.||++.+..+++.+|+|.+.......... .....++. +.+...+||+++.+.+.+... +..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH-HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEEEe
Confidence 4899999999999999999999999997654322211 12233343 334445789999998877543 57899999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH 180 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~ 180 (289)
|+++++|.+++...+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++....... ..
T Consensus 78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~-~~~~l~dfg~~~~~~~~~-~~ 153 (279)
T cd05633 78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKKK-PH 153 (279)
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCC-CCEEEccCCcceeccccC-cc
Confidence 9999999999988888999999999999999999999999 9999999999999988 899999999987554332 22
Q ss_pred cCCCCCCCCCCcccc-c-CCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 181 SIIGTPEYMAPELYE-E-DYTEMVDIYSFGLCLLEMVTMEIPYSECDS--VAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~-~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
...++..|+|||... + .++.++|+||+||++++|++|..||..... .......... .....+...++.+++++.
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~ 231 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--VNVELPDSFSPELKSLLE 231 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc--CCcCCccccCHHHHHHHH
Confidence 346889999999764 3 378899999999999999999999975322 1222221111 222344557899999999
Q ss_pred HHHc-CCCCCC-----CHHHHhcCcccccCCCCC
Q 022956 257 KCIA-QPRARP-----SASELLKDPFFSELNDDD 284 (289)
Q Consensus 257 ~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~~ 284 (289)
+||+ ||.+|| +++++++||||+++++..
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~ 265 (279)
T cd05633 232 GLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQ 265 (279)
T ss_pred HHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhH
Confidence 9998 999999 699999999999987654
No 166
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=8.9e-43 Score=297.07 Aligned_cols=260 Identities=26% Similarity=0.377 Sum_probs=210.4
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC-HHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED-PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.++||+|++|.||+|.+..+|+.||+|.++.....+. ......+.+|+++++.++|+|++++++.+.. .+..++|
T Consensus 3 ~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv 80 (298)
T cd07841 3 EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNINLV 80 (298)
T ss_pred eeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEEEE
Confidence 568899999999999999999999999999987654311 2334567789999999999999999998865 3689999
Q ss_pred eccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+||+ +++|.+++.... .+++..+..++.|+++||.|||++| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASD-GVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCC-CCEEEccceeeeeccCCC
Confidence 9999 789999998765 7999999999999999999999999 9999999999999988 899999999998765432
Q ss_pred c-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--------------
Q 022956 178 A-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-------------- 240 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 240 (289)
. .....+++.|+|||.+.+ .++.++|+|||||++++|++|..||..................+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY 236 (298)
T ss_pred ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence 2 223345778999997643 37889999999999999999988887655444332222111000
Q ss_pred -----------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 241 -----------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 241 -----------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
.......+..+.+++.+||+ ||++|||+.+++.||||++.....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 00112346789999999998 9999999999999999999866554
No 167
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1e-42 Score=291.76 Aligned_cols=251 Identities=29% Similarity=0.493 Sum_probs=208.2
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|++|+||+|.+..++..+++|++..... ......+.+|++.++.++|+|++++++.+... +.++++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~iv 77 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC---QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG--DELWLV 77 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc---chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC--CEEEEE
Confidence 3689999999999999999988999999999975443 22567889999999999999999999887554 679999
Q ss_pred eccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 99 TEVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+|++++++|.+++... ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~-~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGED-GSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccchHHHhcc
Confidence 9999999999999763 45899999999999999999999999 9999999999999998 8999999999876644
Q ss_pred cccc-----ccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC---CC
Q 022956 176 SHAA-----HSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL---NK 245 (289)
Q Consensus 176 ~~~~-----~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 245 (289)
.... ....++..|+|||.+.. .++.++|+||||+++++|++|+.||..........+........... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence 3222 23357889999996654 48889999999999999999999998765554444444332211111 12
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
..++.+.+++.+||. ||++||++.+++.||||
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 457889999999998 99999999999999998
No 168
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-42 Score=289.20 Aligned_cols=252 Identities=33% Similarity=0.543 Sum_probs=212.4
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS-EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+..+.||+|++|.||+|.+..++..|++|.+...... ...+..+.+.+|+.+++.++|+|++++++.+... ..++++
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv 80 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE--DNLYIF 80 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC--CeEEEE
Confidence 5689999999999999999989999999999865432 1244567899999999999999999999877443 678999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+||+++++|.+++.....+++..+..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTN-GVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccceecccccc
Confidence 999999999999988888999999999999999999999999 9999999999999988 8999999999887654443
Q ss_pred cccCCCCCCCCCCccccc-C-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEE-D-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~-~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.....++..|++||.+.. . ++.++|+||||+++++|++|..||................ .....+...++.+.+++.
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-ELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-cCCCcCCCcCHHHHHHHH
Confidence 445567889999996543 3 7889999999999999999999998766444444333212 223344556899999999
Q ss_pred HHHc-CCCCCCCHHHHhcCccc
Q 022956 257 KCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+||. +|++||++.+++.|||+
T Consensus 237 ~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 237 KCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHhhcCcccCcCHHHHhcCCCC
Confidence 9998 99999999999999996
No 169
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-42 Score=294.74 Aligned_cols=256 Identities=24% Similarity=0.474 Sum_probs=206.5
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEe--
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLD-- 89 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-- 89 (289)
++..+| ++.+.||+|+||.||++.++.+++.+|+|++.... .....+.+|+.+++.+ +|+|++++++.+..
T Consensus 15 ~~~~~~-~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 15 DPSDTW-EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred Ccccce-eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 466677 67999999999999999999999999999886432 1135577899999999 69999999998753
Q ss_pred -CCCCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 90 -DQHNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 90 -~~~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
..+..++++|||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTE-GGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCC-CCEEE
Confidence 234578999999999999988752 356889999999999999999999999 9999999999999998 89999
Q ss_pred eccCCccccCCcc-ccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC
Q 022956 165 GDLGFAAIVGRSH-AAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 237 (289)
Q Consensus 165 ~d~g~~~~~~~~~-~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 237 (289)
+|||++....... ......+++.|+|||.+. ..++.++|+||||+++|+|++|..||................
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 245 (286)
T cd06638 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP 245 (286)
T ss_pred ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC
Confidence 9999987654322 223346788999999764 237889999999999999999999998755444433322222
Q ss_pred CCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 238 VKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 238 ~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
......+...+..+.+++.+||+ ||++|||+.++++|+||
T Consensus 246 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 246 PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 12222334457789999999998 99999999999999997
No 170
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-42 Score=292.87 Aligned_cols=256 Identities=29% Similarity=0.502 Sum_probs=208.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
...+.||.|++|.||++.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++.+.....+.+++||
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP---NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC---chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46899999999999999999999999999997543 234467788999999999999999999988776667899999
Q ss_pred ccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 100 EVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRK-GQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecC-CeEEEeeccccccccc
Confidence 99999999888653 356899999999999999999999999 9999999999999988 8999999999875543
Q ss_pred ccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCC----CcHHHHHHHHhCCCCCCCCC-----C
Q 022956 176 SHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSEC----DSVAKIYKKVTGGVKPQALN-----K 245 (289)
Q Consensus 176 ~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~-----~ 245 (289)
... ....++..|+|||...+ .++.++|+||||+++|+|++|..||... .........+.....+.... .
T Consensus 158 ~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd06621 158 SLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI 236 (287)
T ss_pred ccc-ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCC
Confidence 221 23456788999997654 4889999999999999999999999864 22223333333322111111 1
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
..++.+.+++.+||. +|++|||+.|++.||||++...
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred chHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 235789999999998 9999999999999999977643
No 171
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-43 Score=306.45 Aligned_cols=246 Identities=30% Similarity=0.410 Sum_probs=193.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.+.||+|+||.||+|.+..++..||+|+.... ....|+.+++.++|+||+++++.+... ...++|
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 135 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSG--AITCMV 135 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeC--CeeEEE
Confidence 47899999999999999999999999999985422 123588999999999999999988654 578899
Q ss_pred eccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+|++.+ +|.+++.. ...+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 136 ~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDV-DQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEecCccccccccCc
Confidence 999966 78777754 567999999999999999999999999 9999999999999988 899999999997654443
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCC-CCCCCcH---------HHHHHHHhC-CCCCCCC--
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIP-YSECDSV---------AKIYKKVTG-GVKPQAL-- 243 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p-~~~~~~~---------~~~~~~~~~-~~~~~~~-- 243 (289)
......+++.|+|||.+.+. ++.++|||||||++|+|+++..| |...... ......+.. +..+...
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 44455689999999977654 89999999999999999985444 3321110 111111111 0000000
Q ss_pred ----------------------------CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 244 ----------------------------NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 244 ----------------------------~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
....+..+.+||.+||+ ||++|||+.|+|+||||+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 11235567789999999 99999999999999999874
No 172
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.6e-42 Score=288.37 Aligned_cols=254 Identities=30% Similarity=0.548 Sum_probs=214.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS-EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|++|.||++.++.++..+|+|.+...... ........+.+|+.++++++|+|++++++.+.......++++
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v 84 (264)
T cd06653 5 RLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIF 84 (264)
T ss_pred eeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEE
Confidence 6899999999999999999999999999998653221 134456789999999999999999999998766555678999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
+||+++++|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 85 VEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECccccccccccccc
Confidence 999999999999988777999999999999999999999999 9999999999999988 899999999997653211
Q ss_pred ---ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 ---AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ---~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
......++..|+|||.+.+. ++.++|+||||++++++++|..||..........+.... ......+...++.+.+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~ 240 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ-PTKPMLPDGVSDACRD 240 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcC-CCCCCCCcccCHHHHH
Confidence 11234578899999977654 889999999999999999999999876666555544433 2334456667899999
Q ss_pred HHHHHHcCCCCCCCHHHHhcCccc
Q 022956 254 FIEKCIAQPRARPSASELLKDPFF 277 (289)
Q Consensus 254 li~~~l~dp~~Rps~~~il~h~~~ 277 (289)
++.+||++|.+||++.+++.|||.
T Consensus 241 ~i~~~l~~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 241 FLKQIFVEEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHhcCcccCccHHHHhcCCCC
Confidence 999999988999999999999984
No 173
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.6e-43 Score=307.16 Aligned_cols=254 Identities=24% Similarity=0.404 Sum_probs=207.5
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-C-----CceEEeeeeEEeC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-N-----KYIIVCYSVWLDD 90 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~-----~~i~~~~~~~~~~ 90 (289)
|| .+.+.||+|+||.|.+|.+.+|++.||||+++. ..........|+++|..|+ | -|+|+++++|...
T Consensus 187 rY-~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN-----~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 187 RY-EVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN-----KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EE-EEEEEecccccceeEEEEecCCCcEEEEEeecc-----ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 44 468999999999999999999999999999985 4556677788999999997 3 4899999998665
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe-CCCCcEEEecc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN-GNIGQVKIGDL 167 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~-~~~~~~~l~d~ 167 (289)
+++|||+|.++. +|.+++.++ ..++...+..++.|++.+|.+||+.| ++|+||||+|||+. .+...||++||
T Consensus 261 --~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 261 --NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred --cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEec
Confidence 689999999966 999999875 46889999999999999999999999 99999999999994 44468999999
Q ss_pred CCccccCCccccccCCCCCCCCCCcc-cccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-----
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ----- 241 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 241 (289)
|++.+....-- .+.-+.-|.|||+ +...|+.+.||||||||++||++|...|++....+++..++.-...+.
T Consensus 336 GSSc~~~q~vy--tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 336 GSSCFESQRVY--TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccccccCCcce--eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99998765533 5566778999995 455699999999999999999999999987665555543222111000
Q ss_pred --------------------------------------------CCC-----------CCCChHHHHHHHHHHc-CCCCC
Q 022956 242 --------------------------------------------ALN-----------KVKDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 242 --------------------------------------------~~~-----------~~~~~~~~~li~~~l~-dp~~R 265 (289)
..+ ......+.+++.+||+ ||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 000 0123467899999999 99999
Q ss_pred CCHHHHhcCcccccCCCC
Q 022956 266 PSASELLKDPFFSELNDD 283 (289)
Q Consensus 266 ps~~~il~h~~~~~~~~~ 283 (289)
+|..++|+||||......
T Consensus 494 ~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 494 ITPAQALNHPFLTGTSLE 511 (586)
T ss_pred CCHHHHhcCccccccccc
Confidence 999999999999965443
No 174
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.7e-42 Score=292.21 Aligned_cols=255 Identities=30% Similarity=0.507 Sum_probs=210.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC---CCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK---NKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~ 95 (289)
|++.++||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++++.++ |||++++++.+... ...
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~--~~~ 77 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT---PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG--PRL 77 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC---CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC--CEE
Confidence 467899999999999999999999999999987543 2334567888999999986 99999999987543 678
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++++||+++++|.+++..+ .+++..+..++.|++.+|.+||+.| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 78 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNT-GNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCC-CCEEEccCCceeecCC
Confidence 9999999999999998764 7999999999999999999999999 9999999999999988 8999999999976654
Q ss_pred ccc-cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 176 SHA-AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 176 ~~~-~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
... .....++..|+|||.+.+. ++.++|+||||+++|+|++|..||......... ..+.....+.......+.++.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-MLIPKSKPPRLEDNGYSKLLR 232 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-hccccCCCCCCCcccCCHHHH
Confidence 322 2334578889999976532 688999999999999999999999875443332 222222223222333678999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+++..||+ ||++||++.+++.|+||++...+
T Consensus 233 ~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~ 264 (277)
T cd06917 233 EFVAACLDEEPKERLSAEELLKSKWIKAHSKT 264 (277)
T ss_pred HHHHHHcCCCcccCcCHHHHhhChHhhccccC
Confidence 99999998 99999999999999999887644
No 175
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.2e-42 Score=293.96 Aligned_cols=254 Identities=23% Similarity=0.346 Sum_probs=205.9
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
.| ++.+.||+|++|.||+|.++.+++.+++|.++..... +.....+.+|+..+++++|||++++++.+.....+..+
T Consensus 6 ~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 6 EY-EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hh-hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 44 5789999999999999999999999999999865432 23344567899999999999999999988766557899
Q ss_pred EEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 97 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+|+||+.+ +|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNR-GILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCC-CcEEEeecCceeeccC
Confidence 99999986 899988764 45899999999999999999999999 9999999999999998 8999999999887655
Q ss_pred cc-ccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-------------
Q 022956 176 SH-AAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK------------- 239 (289)
Q Consensus 176 ~~-~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~------------- 239 (289)
.. ......+++.|+|||.+.+. ++.++|+||||+++++|++|..||..................
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 42 22334567889999976543 688999999999999999999999865544333222111000
Q ss_pred ---------------CCCCCCC-CChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 ---------------PQALNKV-KDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 ---------------~~~~~~~-~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
....+.. .++.+.+++.+||+ ||++|||+.|++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0011111 47889999999998 99999999999999998
No 176
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.5e-43 Score=300.46 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=190.3
Q ss_pred eeeecccCcceEEEEeecC--CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 22 SDLLGSGAVKKVYRAFDQE--EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.++||+|+||+||+|.++. ++..||+|.+..... ...+.+|+++++.++|||++++++.+....+..+++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI------SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 5789999999999998653 568899999874322 24567899999999999999999988766667899999
Q ss_pred ccccCCcHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe---CCCCcEEEecc
Q 022956 100 EVCTSGNLRTYRKK---------HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN---GNIGQVKIGDL 167 (289)
Q Consensus 100 e~~~~~sL~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~---~~~~~~~l~d~ 167 (289)
||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||++. ...+.++|+||
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 99976 78777642 124889999999999999999999999 99999999999993 22278999999
Q ss_pred CCccccCCccc----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------HHHHH
Q 022956 168 GFAAIVGRSHA----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV---------AKIYK 232 (289)
Q Consensus 168 g~~~~~~~~~~----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------~~~~~ 232 (289)
|++........ .....+++.|+|||.+.+ .++.++|||||||++++|+||..||...... .....
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR 236 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHH
Confidence 99986643321 223457889999997654 3788999999999999999999999643211 00000
Q ss_pred HHh--------------CCCC---------------------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcc
Q 022956 233 KVT--------------GGVK---------------------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 233 ~~~--------------~~~~---------------------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~ 276 (289)
... .... ........+..+.+|+.+||+ ||.+|||++|+|+|||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07867 237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPY 316 (317)
T ss_pred HHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 000 0000 000111235678899999999 9999999999999999
Q ss_pred c
Q 022956 277 F 277 (289)
Q Consensus 277 ~ 277 (289)
|
T Consensus 317 f 317 (317)
T cd07867 317 F 317 (317)
T ss_pred C
Confidence 8
No 177
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.5e-42 Score=291.58 Aligned_cols=253 Identities=23% Similarity=0.406 Sum_probs=201.3
Q ss_pred eecccCcceEEEEeecCCCcEEEEEEeeecccCCCHH--HHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 24 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPV--LVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.||+|+||.||++.+..+++.||+|.+.......... .........+.++...||+++.+.+.+... ..+++|+||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CEEEEEEec
Confidence 4899999999999999999999999997654321111 111222234455566899999998877543 579999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS 181 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~ 181 (289)
+.|++|..++...+.+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++...... ....
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~-~~~kl~dfg~~~~~~~~-~~~~ 154 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPHA 154 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCC-CCEEEccCcCccccCcc-CCcC
Confidence 999999999988888999999999999999999999999 9999999999999988 89999999998755432 2234
Q ss_pred CCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 182 IIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDS--VAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
..++..|+|||.+.+ .++.++|+||+|+++++|++|..||..... .......... .....+...+..+.+++.+
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSPELRSLLEG 232 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--cCCCCCCcCCHHHHHHHHH
Confidence 468899999997653 378999999999999999999999986522 1222222221 1222344468899999999
Q ss_pred HHc-CCCCCC-----CHHHHhcCcccccCCCCC
Q 022956 258 CIA-QPRARP-----SASELLKDPFFSELNDDD 284 (289)
Q Consensus 258 ~l~-dp~~Rp-----s~~~il~h~~~~~~~~~~ 284 (289)
||. +|.+|| ++.++++||||+..+|+.
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~ 265 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQM 265 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhCccccCCCchH
Confidence 998 999999 999999999999987754
No 178
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.9e-42 Score=292.16 Aligned_cols=257 Identities=25% Similarity=0.477 Sum_probs=212.4
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
+..| +..++||+|+||.||+|.+..++..+|+|.++... .......+.+|+++++++.|+|++++++.+.+. ..
T Consensus 3 ~~~y-~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 76 (277)
T cd06640 3 EELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG--TK 76 (277)
T ss_pred HHhh-hhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc---cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--CE
Confidence 3455 46788999999999999999999999999997543 234467889999999999999999999988554 68
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++|+||+++++|.+++.. .++++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 77 ~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~-~~~~l~dfg~~~~~~ 152 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLT 152 (277)
T ss_pred EEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCC-CCEEEcccccceecc
Confidence 9999999999999999876 46899999999999999999999999 9999999999999988 899999999997654
Q ss_pred Cccc-cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 175 RSHA-AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 175 ~~~~-~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.... .....++..|+|||.+.+ .++.++|+||||+++++|++|..||.......... .+..... .......+..+.
T Consensus 153 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 230 (277)
T cd06640 153 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-LIPKNNP-PTLTGEFSKPFK 230 (277)
T ss_pred CCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-hhhcCCC-CCCchhhhHHHH
Confidence 3321 223356778999997654 48899999999999999999999998655443332 2222222 233445678899
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+++.+||+ +|++||++.+++.|+||.+....
T Consensus 231 ~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 231 EFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred HHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 99999998 99999999999999999877543
No 179
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-42 Score=293.25 Aligned_cols=255 Identities=29% Similarity=0.520 Sum_probs=208.9
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|+||.||++.+..+|..||+|.++... .......+.+|++++++++|+|++++++.+... +.+++|
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv 77 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE--GAVYMC 77 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC--CeEEEE
Confidence 367899999999999999999999999999987532 344467788999999999999999999987553 689999
Q ss_pred eccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 99 TEVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+||+++++|..++... ..+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.+ +.++|+|||.+....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGN-GQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCC-CCEEEeecCCccccc
Confidence 9999999999988763 378999999999999999999996 58 9999999999999987 899999999987653
Q ss_pred CccccccCCCCCCCCCCcccccC-------CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHhCCCCCCCCCC
Q 022956 175 RSHAAHSIIGTPEYMAPELYEED-------YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK--IYKKVTGGVKPQALNK 245 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~~~-------~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 245 (289)
.. ......+++.|+|||.+.+. ++.++|+|||||++++|++|..||........ ....+..+..+ ..+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~ 232 (286)
T cd06622 155 AS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP-TLPS 232 (286)
T ss_pred CC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC-CCCc
Confidence 32 22234577899999976432 47899999999999999999999975433221 12222222222 2334
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
..++.+++++.+||. +|++||++++++.||||......
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 478999999999998 99999999999999999887654
No 180
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.7e-42 Score=288.30 Aligned_cols=248 Identities=30% Similarity=0.483 Sum_probs=201.7
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
..+||+|+||.||++.+..++..+++|.+... .....+.+.+|+.+++.++|+|++++++.+... ..+++++||
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--GFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCC----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--CEEEEEEec
Confidence 46899999999999999999999999998754 333456788999999999999999999987544 689999999
Q ss_pred ccCCcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 102 CTSGNLRTYRKKH-RHV--SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 102 ~~~~sL~~~~~~~-~~l--~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+++++|.+++... ..+ ++..+..++.|++.|+.|||+.| ++|+||+|+||+++.+.+.++|+|||.+........
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 9999999999764 445 88899999999999999999999 999999999999987547999999999876543222
Q ss_pred -cccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 179 -AHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 179 -~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
.....+++.|+|||.+.+ .++.++|+||||+++++|++|..||......................+...++.++++
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNF 244 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHH
Confidence 223457889999997643 2788999999999999999999999764433222211111112223445578899999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCccc
Q 022956 255 IEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+.+||. +|++||++.+++.||||
T Consensus 245 i~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 245 ILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHcCCCchhCCCHHHHHhCCCC
Confidence 999998 99999999999999997
No 181
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.2e-42 Score=290.72 Aligned_cols=251 Identities=24% Similarity=0.407 Sum_probs=207.9
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|+||.||++.+..+|+.+++|.+...... .....+.+.+|++.+++++|+|++++++.+.. +...++++||+.+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-RKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-hhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEecCCC
Confidence 68999999999999989999999999755331 23456788999999999999999999987743 4679999999999
Q ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-------
Q 022956 105 GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH------- 177 (289)
Q Consensus 105 ~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~------- 177 (289)
++|.+++...+.+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 78 GDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSN-GHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCC-CCEEEEecccchhcccCcccccccc
Confidence 999999988778999999999999999999999999 9999999999999998 899999999987654321
Q ss_pred --ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 178 --AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 178 --~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
......++..|++||...+. .+.++|+||||++++++++|..||......... ..+..+..........++.+.++
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF-QNILNGKIEWPEDVEVSDEAIDL 233 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcCCcCCCccccCCHHHHHH
Confidence 12234567889999966544 888999999999999999999999875544433 33333222211122248899999
Q ss_pred HHHHHc-CCCCCCCH---HHHhcCcccccCCC
Q 022956 255 IEKCIA-QPRARPSA---SELLKDPFFSELND 282 (289)
Q Consensus 255 i~~~l~-dp~~Rps~---~~il~h~~~~~~~~ 282 (289)
+.+||+ +|++||++ .++|.||||++++|
T Consensus 234 i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 234 ISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred HHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 999998 99999999 99999999999876
No 182
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.3e-42 Score=289.75 Aligned_cols=253 Identities=29% Similarity=0.500 Sum_probs=206.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCC------CHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE------DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
.+.+.||+|++|.||+|.+..+|+.+|+|.++...... .....+.+.+|+++++.++|+|++++++.+.. .+
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 81 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT--EE 81 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--CC
Confidence 56899999999999999999999999999987543211 12234568889999999999999999987744 36
Q ss_pred eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 94 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.+++|+||+++++|.+++.....+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++++|||.+...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDAD-GICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCC-CeEEEeeccccccc
Confidence 78999999999999999988788999999999999999999999999 9999999999999988 89999999998755
Q ss_pred CCcc---ccccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---CCCC
Q 022956 174 GRSH---AAHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP---QALN 244 (289)
Q Consensus 174 ~~~~---~~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 244 (289)
.... ......++..|+|||.+.. .++.++|+||||++++++++|..||................... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS 238 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence 3221 1223457789999997653 27889999999999999999999997655544443332222221 1222
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
...+..+.+++.+||+ ||++||+++++++||||
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 239 MNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 2357899999999998 99999999999999997
No 183
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.6e-42 Score=294.91 Aligned_cols=262 Identities=28% Similarity=0.486 Sum_probs=213.4
Q ss_pred ceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEE
Q 022956 9 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWL 88 (289)
Q Consensus 9 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 88 (289)
....++.++| .+.+.||+|+||.||++.+..++..+++|.+.... ....+.+.+|+.+++.++|||++++++.+.
T Consensus 12 ~~~~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~ 86 (293)
T cd06647 12 VSVGDPKKKY-TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYL 86 (293)
T ss_pred eeccCchhhc-eeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheee
Confidence 3345566777 57899999999999999998899999999986432 223466888999999999999999999886
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccC
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLG 168 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g 168 (289)
.. +..++|+||+++++|.+++.+. .+++..+..++.|++.|+.+||++| ++|+||+|+||+++.+ +.++|+|||
T Consensus 87 ~~--~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~-~~~kL~dfg 160 (293)
T cd06647 87 VG--DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFG 160 (293)
T ss_pred eC--CcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCC-CCEEEccCc
Confidence 54 5789999999999999998764 5889999999999999999999999 9999999999999988 899999999
Q ss_pred CccccCCcc-ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCC
Q 022956 169 FAAIVGRSH-AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 169 ~~~~~~~~~-~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
++....... ......+++.|++||.+.+ .++.++|+||||+++|++++|..||......................+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd06647 161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEK 240 (293)
T ss_pred ceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccc
Confidence 886554322 2223457788999997654 48889999999999999999999998755443333222222222223344
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.+..+++++..||. +|++||++++++.|+||+...
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 57889999999998 999999999999999998765
No 184
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-42 Score=305.68 Aligned_cols=256 Identities=24% Similarity=0.337 Sum_probs=203.0
Q ss_pred cceeeeecccCcceEEEEeec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ--EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
|++.++||+|+||.||++... .++..+|+|.+... ....+|++++++++||||+++++.+... ..++
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~~ 162 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWK--STVC 162 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeC--CEEE
Confidence 478999999999999999754 45678999988642 2345699999999999999999887544 5799
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
++||++.+ +|.+++.....+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++......
T Consensus 163 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~-~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 163 MVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEP-ENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEccCccccccCcc
Confidence 99999965 89898877788999999999999999999999999 9999999999999988 89999999998765432
Q ss_pred c---ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHhC-------------
Q 022956 177 H---AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTG------------- 236 (289)
Q Consensus 177 ~---~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~------------- 236 (289)
. ......+++.|+|||.+.+. ++.++|||||||++|+|++|+.||.+... ...+...+..
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 2 22345689999999987654 88999999999999999999999965321 1111111110
Q ss_pred ------------CCCCCC------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCCC
Q 022956 237 ------------GVKPQA------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPSP 289 (289)
Q Consensus 237 ------------~~~~~~------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~~ 289 (289)
...+.. .....+..+.++|.+||. ||++||++.++|.||||++..++.-+.+|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~~~~~ 390 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLLNITP 390 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhhcCcc
Confidence 000000 012235678899999998 99999999999999999998777655443
No 185
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.7e-42 Score=300.49 Aligned_cols=267 Identities=25% Similarity=0.385 Sum_probs=211.0
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC---
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ--- 91 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 91 (289)
..+| ++.+.||+|+||+||++.+..+++.||+|.+..... .......+.+|+.+++.++|+|++++++++....
T Consensus 4 ~~~y-~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 4 DTKY-VPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREA 80 (337)
T ss_pred ccce-eEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCccchHHheecccccc
Confidence 4455 679999999999999999999999999999875422 2223456778999999999999999998765432
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
...+++++||+. ++|.+++...+.+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++.
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNAN-CDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECcCcccc
Confidence 135899999996 489999988888999999999999999999999999 9999999999999988 899999999997
Q ss_pred ccCCcc-ccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh--CC---------
Q 022956 172 IVGRSH-AAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GG--------- 237 (289)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~--------- 237 (289)
...... ......++..|+|||.+. ..++.++|+||||+++++|++|..||.+.+.......... +.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 664332 222345678899999664 3488999999999999999999999976432221111100 00
Q ss_pred ---------------CCC--CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCC
Q 022956 238 ---------------VKP--QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPS 288 (289)
Q Consensus 238 ---------------~~~--~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~ 288 (289)
... .......++.+.+++.+||+ +|++|||++++++||||+.+.....+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~ 305 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV 305 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCcc
Confidence 000 01122457889999999999 9999999999999999998866665543
No 186
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.7e-42 Score=292.45 Aligned_cols=253 Identities=24% Similarity=0.419 Sum_probs=206.7
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.++||+|++|.||+|.++.+++.|++|.++.... .....+.+.+|+++++.++|+|++++++.+... +..+
T Consensus 2 ~y-~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 76 (288)
T cd07833 2 KY-EVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRK--GRLY 76 (288)
T ss_pred ce-eEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEEC--CEEE
Confidence 44 689999999999999999999999999999876433 344467889999999999999999999988653 6799
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+++||++++.+..+..+...+++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 77 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 77 LVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSES-GVLKLCDFGFARALRAR 153 (288)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEEeeecccccCCC
Confidence 99999999777777776677999999999999999999999999 9999999999999988 89999999998876544
Q ss_pred c--ccccCCCCCCCCCCcccc-c-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh--CCCC-----------
Q 022956 177 H--AAHSIIGTPEYMAPELYE-E-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GGVK----------- 239 (289)
Q Consensus 177 ~--~~~~~~~~~~~~aPE~~~-~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~----------- 239 (289)
. ......++..|+|||... . .++.++|+||||+++++|++|..||.+....+....... ....
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 3 223345678899999654 3 478899999999999999999999986544433322111 0000
Q ss_pred --------C--------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 --------P--------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 --------~--------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
. .......++.+.+|+.+||. +|++||+++++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 01122347889999999998 99999999999999998
No 187
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.8e-42 Score=293.17 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=202.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||.|++|.||+|.++.+|..+|+|.+..... .......+.+|++++++++|||++++++.+.. ++..++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (284)
T cd07860 3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLVF 78 (284)
T ss_pred eeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc--ccccchHHHHHHHHHHhcCCCCCcchhhhccc--CCcEEEEe
Confidence 678999999999999999999999999999875432 22234578889999999999999999998744 46789999
Q ss_pred ccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 79 e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~-~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPV 154 (284)
T ss_pred ecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEeeccchhhcccCc
Confidence 99965 88888865 356899999999999999999999999 9999999999999998 899999999987654332
Q ss_pred c-cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-------------
Q 022956 178 A-AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ------------- 241 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 241 (289)
. .....+++.|+|||.+.+. ++.++|+||||+++++|+||+.||..........+.+.....+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 2 2233467889999976543 68889999999999999999999987555444433332211110
Q ss_pred -------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 242 -------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 242 -------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
......++.++++|.+||+ ||++||+++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0112357889999999998 99999999999999998
No 188
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.9e-42 Score=290.63 Aligned_cols=255 Identities=25% Similarity=0.464 Sum_probs=209.9
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|++|+||++.+..+|..+|+|++.... .+...+.+.+|+++++.++|||++++++.+... ..+++|
T Consensus 7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 81 (284)
T cd06620 7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNICMC 81 (284)
T ss_pred HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEEEE
Confidence 367899999999999999999999999999987542 344567889999999999999999999988654 689999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+||+++++|.+++...+.+++..+..++.+++.+|.|||+ .+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSR-GQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCC-CcEEEccCCcccchhhh-
Confidence 9999999999999887889999999999999999999997 58 9999999999999988 89999999998654322
Q ss_pred ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH----------HHHHHHHhCCCCCCCCCCC
Q 022956 178 AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSV----------AKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 246 (289)
......++..|+|||.+. +.++.++|+|||||+++++++|..||...... ......+.....+......
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSD 237 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchh
Confidence 122346788999999654 45889999999999999999999999854331 1122222222222222223
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
.+..+.+|+.+||+ ||++||++.++++|+||.+...
T Consensus 238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 238 FPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 67889999999998 9999999999999999966543
No 189
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.9e-42 Score=290.39 Aligned_cols=263 Identities=32% Similarity=0.583 Sum_probs=218.8
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
..++.+.| .+.+.||+|++|.||++.+..++..+++|++..... ..+.+.+|++.++.++|+|++++++.+...
T Consensus 14 ~~~~~~~~-~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 14 EGDPRELY-KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred CCCccccc-hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 34566665 578999999999999999998999999999986432 356788899999999999999999988665
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...++++||+++++|.+++.... .++...+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~-~~~~l~d~~~ 162 (286)
T cd06614 88 --DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKD-GSVKLADFGF 162 (286)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCC-CCEEECccch
Confidence 67999999999999999999876 8999999999999999999999999 9999999999999988 8999999998
Q ss_pred ccccCCccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 170 AAIVGRSHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
+........ .....++..|+|||.+.+. ++.++|+||||+++++|++|..||..........................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (286)
T cd06614 163 AAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW 242 (286)
T ss_pred hhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhC
Confidence 876543321 1223467889999976544 88999999999999999999999987655544444443333332333336
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+..+++++..||+ +|.+||++.+++.|+||++..+..
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 280 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKE 280 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchH
Confidence 7899999999999 999999999999999999976554
No 190
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.4e-42 Score=293.02 Aligned_cols=255 Identities=26% Similarity=0.424 Sum_probs=203.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 98 (289)
...++||+|+||.||++.+..++..+|+|.+..... ......+.+|+..+.++. |+|++++++.+... ...+++
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~~~~~ 81 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD---EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GDCWIC 81 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC---hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--CcEEEE
Confidence 356889999999999999999999999999875432 244667888999999996 99999999987654 567889
Q ss_pred eccccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 99 TEVCTSGNLRTYRK-----KHRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 99 ~e~~~~~sL~~~~~-----~~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
+|++.. ++.++.. ....+++..+..++.|++.||.|||+. + ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~ 157 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRN-GNIKLCDFGISGQ 157 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccC-CcEEEeecchhHH
Confidence 999865 6655432 246799999999999999999999974 8 9999999999999988 8999999999976
Q ss_pred cCCccccccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC---CC
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL---NK 245 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 245 (289)
...........++..|+|||.+.+ .++.++|+||||+++++|++|+.||...............+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred hccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence 554433344467889999997654 37889999999999999999999998654332332332222222221 22
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
..+..+.+|+.+||+ ||++||++++|+.||||....+.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEER 276 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhc
Confidence 367899999999998 99999999999999999886543
No 191
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.2e-42 Score=294.66 Aligned_cols=257 Identities=26% Similarity=0.447 Sum_probs=210.6
Q ss_pred ccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 18 FGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 18 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
++....+||+|+||.||++.++.++..||+|.+..... ...+.+.+|+..++.++|||++++++.+... +..++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~i 95 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVG--EELWV 95 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheeeC--CeEEE
Confidence 33456789999999999999999999999999875432 2245678899999999999999999987554 67899
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
++||+++++|..++.. ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 96 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~-~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 96 LMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDV 171 (297)
T ss_pred EEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccC-CcEEEeechhHhhccccc
Confidence 9999999999998765 56899999999999999999999999 9999999999999988 899999999986553322
Q ss_pred -ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 -AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 -~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
......++..|+|||.+.+ .++.++|+||||+++++|++|..||..........................++.+.+++
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 251 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFL 251 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHH
Confidence 2233567889999997765 48889999999999999999999998655444443332222222223344678999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 256 EKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
.+||+ +|++||+++++++||||.+...+.
T Consensus 252 ~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~ 281 (297)
T cd06659 252 ERMLTREPQERATAQELLDHPFLLQTGLPE 281 (297)
T ss_pred HHHhcCCcccCcCHHHHhhChhhccCCCcc
Confidence 99998 999999999999999999886543
No 192
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.5e-42 Score=294.90 Aligned_cols=254 Identities=25% Similarity=0.433 Sum_probs=208.3
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
....||+|+||.||++.+..++..+|+|.+... .....+.+.+|+..++.++|+|++++++.+... +..++++|
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~lv~e 99 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG--DELWVVME 99 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC--CeEEEEEe
Confidence 357799999999999999999999999998653 234456788999999999999999999887544 67899999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-cc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-AA 179 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-~~ 179 (289)
|+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++....... ..
T Consensus 100 ~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 100 FLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred CCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEccCcchhhcccccccC
Confidence 9999999998865 45899999999999999999999999 9999999999999988 899999999987553222 22
Q ss_pred ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 258 (289)
....++..|+|||.+.+. ++.++|+||||+++++|++|..||..........................++.+.+++.+|
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 255 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLM 255 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHH
Confidence 234578899999977654 8889999999999999999999998755444333322221111122334678899999999
Q ss_pred Hc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 259 IA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 259 l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
|. ||.+|||++++++||||+......
T Consensus 256 l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 256 LVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred ccCChhHCcCHHHHhhChhhhccCCcc
Confidence 98 999999999999999999775544
No 193
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.6e-42 Score=296.97 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=211.0
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCH----------HHHHHHHHHHHHHHhCCCCceEE
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDP----------VLVNRLHSEVQLLRTLKNKYIIV 82 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~ 82 (289)
+..+||..+.+.||+|+||+||+|.++.+++.||+|+++........ .....+.+|++++++++|+|+++
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 46788987789999999999999999999999999999765432211 01124678999999999999999
Q ss_pred eeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcE
Q 022956 83 CYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 162 (289)
Q Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~ 162 (289)
+++.+... ...+++|||+.+ +|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.+
T Consensus 85 ~~~~~~~~--~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~-~~~ 158 (335)
T PTZ00024 85 LVDVYVEG--DFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSK-GIC 158 (335)
T ss_pred eeEEEecC--CcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCC-CCE
Confidence 99987544 689999999975 89999988788999999999999999999999999 9999999999999988 899
Q ss_pred EEeccCCccccCCc---------------cccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 022956 163 KIGDLGFAAIVGRS---------------HAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECD 225 (289)
Q Consensus 163 ~l~d~g~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~ 225 (289)
+|+|||.+...... .......+++.|+|||.+.+. ++.++|+||||+++++|++|..||.+..
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999998765411 111123457789999977543 6889999999999999999999998766
Q ss_pred cHHHHHHHHhCC--CCCC-----------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 226 SVAKIYKKVTGG--VKPQ-----------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 226 ~~~~~~~~~~~~--~~~~-----------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
............ .... ......+..+.+++.+||+ +|++||++++++.||||++
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 239 EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence 554433222211 1000 0012346788999999999 9999999999999999997
Q ss_pred CCC
Q 022956 280 LND 282 (289)
Q Consensus 280 ~~~ 282 (289)
...
T Consensus 319 ~~~ 321 (335)
T PTZ00024 319 DPL 321 (335)
T ss_pred CCC
Confidence 743
No 194
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.9e-42 Score=299.23 Aligned_cols=264 Identities=30% Similarity=0.434 Sum_probs=215.4
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC---CCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ---HNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~ 95 (289)
|++.++||+|++|.||+|.+..+|+.+|+|.+..... .....+.+.+|+.+++.++|+|++++.+++.... ...+
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 3689999999999999999998999999999975432 2444677889999999999999999998875542 2468
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+++++|+.+ +|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+.....
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSN-CDLKICDFGLARGVDP 155 (330)
T ss_pred EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEcccCceEeecc
Confidence 999999985 89999988778999999999999999999999999 9999999999999999 8999999999987654
Q ss_pred cc----ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC--------
Q 022956 176 SH----AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ-------- 241 (289)
Q Consensus 176 ~~----~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-------- 241 (289)
.. ......++..|+|||.+.+ .++.++|+||||+++++|++|..||.+................+.
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 43 2233456888999997654 478899999999999999999999987655443333222111100
Q ss_pred --------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCC
Q 022956 242 --------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPS 288 (289)
Q Consensus 242 --------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~ 288 (289)
......++.+.+++..||+ +|++||++++++.||||+++.....++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~ 303 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPV 303 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCC
Confidence 0112247789999999998 9999999999999999999987766543
No 195
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-41 Score=288.37 Aligned_cols=250 Identities=28% Similarity=0.500 Sum_probs=207.3
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.++||+|++|.||++.++.++..+++|.+.... ....+.+.+|+.+++.++|||++++++.+... +..++++||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~--~~~~~v~e~ 97 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG--DELWVVMEF 97 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcC--CeEEEEEec
Confidence 578999999999999999999999999986542 23345688899999999999999999987543 678999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-cccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~-~~~~ 180 (289)
+++++|.+++.. .++++..+..++.|++.|+.+||++| ++|+||+|+||+++.+ +.++|+|||.+...... ....
T Consensus 98 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 98 LEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred cCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCC-CcEEEcccccchhhccCCcccc
Confidence 999999999987 66999999999999999999999999 9999999999999998 89999999988655332 2223
Q ss_pred cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-CCCCCCCChHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-QALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~ 258 (289)
...+++.|+|||...+. ++.++|+||||+++++|++|..||.......... .+.....+ .......+..+.+++.+|
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~ 252 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPPKLKNLHKVSPRLRSFLDRM 252 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCCCCcccccCCHHHHHHHHHH
Confidence 34578899999976654 8889999999999999999999997755443333 33333222 222233678999999999
Q ss_pred Hc-CCCCCCCHHHHhcCcccccCCC
Q 022956 259 IA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 259 l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
|. +|++||++.++++||||++...
T Consensus 253 l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 253 LVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred cccChhhCcCHHHHccCcccccCCC
Confidence 98 9999999999999999998654
No 196
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.2e-42 Score=298.49 Aligned_cols=265 Identities=26% Similarity=0.376 Sum_probs=208.8
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
+.+++| ++.+.||+|+||.||+|.++.+|+.||+|.+..... ...+.+.+|+++++.++|||++++++.+.....
T Consensus 2 ~~~~~y-~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 2 DLGSRY-MDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred CcCcce-EEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 356777 679999999999999999999999999999976532 335668889999999999999999877644321
Q ss_pred ------------CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 93 ------------NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 93 ------------~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
...++++||+++ +|.+++.. ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~ 152 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCc
Confidence 357899999975 89888865 46899999999999999999999999 999999999999986546
Q ss_pred cEEEeccCCccccCCccc----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 022956 161 QVKIGDLGFAAIVGRSHA----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 234 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~~----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~ 234 (289)
.++++|||.+........ .....++..|+|||.+.+ .++.++|+|||||++++|++|..||............+
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 899999999876533211 122346778999996543 37889999999999999999999997655444433332
Q ss_pred hCCCCC---------------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 235 TGGVKP---------------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 235 ~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
...... .......+.++.+|+.+||+ ||++||++.+++.||||+.+..+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~ 312 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDE 312 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccc
Confidence 211000 00112356789999999998 99999999999999999987655443
No 197
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-42 Score=307.34 Aligned_cols=248 Identities=25% Similarity=0.361 Sum_probs=195.3
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
+..| .+.++||+|+||.||++.+..++..||+|.... ..+.+|++++++++|+||+++++++... +.
T Consensus 168 ~~gy-~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~ 234 (461)
T PHA03211 168 GLGF-AIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVG--GL 234 (461)
T ss_pred cCCe-EEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEEC--CE
Confidence 3455 689999999999999999999999999996432 2346799999999999999999987554 57
Q ss_pred eEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 95 LNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.+++++++.+ +|.+++... ..+++.++..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++...
T Consensus 235 ~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~-~~vkL~DFGla~~~ 310 (461)
T PHA03211 235 TCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGP-EDICLGDFGAACFA 310 (461)
T ss_pred EEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCC-CCEEEcccCCceec
Confidence 8899999965 888887653 56999999999999999999999999 9999999999999988 89999999999765
Q ss_pred CCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHhCCCCC--
Q 022956 174 GRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD-------SVAKIYKKVTGGVKP-- 240 (289)
Q Consensus 174 ~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~-------~~~~~~~~~~~~~~~-- 240 (289)
..... .....|++.|+|||.+.+. ++.++|||||||++|+|++|..|+.... ......+.+......
T Consensus 311 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 311 RGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 43221 2234689999999977654 8999999999999999999775543211 112222222221100
Q ss_pred ------------------------CC----C--CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 241 ------------------------QA----L--NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 241 ------------------------~~----~--~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
.. + ....+..+.+||.+||+ ||.+|||+.|+|+||||+.
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00 0 01235678999999999 9999999999999999974
No 198
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-44 Score=307.11 Aligned_cols=236 Identities=35% Similarity=0.520 Sum_probs=203.3
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+-||+|+.|.||+++.. ++.||||+++. .-+.+++-|++|+|+||+.+.+++. +.-.+|||||||
T Consensus 130 eWlGSGaQGAVF~Grl~--netVAVKKV~e-----------lkETdIKHLRkLkH~NII~FkGVCt--qsPcyCIiMEfC 194 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH--NETVAVKKVRE-----------LKETDIKHLRKLKHPNIITFKGVCT--QSPCYCIIMEFC 194 (904)
T ss_pred hhhccCcccceeeeecc--CceehhHHHhh-----------hhhhhHHHHHhccCcceeeEeeeec--CCceeEEeeecc
Confidence 44999999999999876 88999999863 2234789999999999999999984 446899999999
Q ss_pred cCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccC
Q 022956 103 TSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSI 182 (289)
Q Consensus 103 ~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~ 182 (289)
..|.|...+..+..++......|..+|+.|+.|||.+. ++|+|||.-||||..+ ..|||+|||-+..........+.
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~-d~VKIsDFGTS~e~~~~STkMSF 271 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYD-DVVKISDFGTSKELSDKSTKMSF 271 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeecc-ceEEeccccchHhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999 9999999999999999 79999999999888776666778
Q ss_pred CCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-
Q 022956 183 IGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA- 260 (289)
Q Consensus 183 ~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~- 260 (289)
+||..|||||..+.+ .+.+.||||||++||||+||..||.+.+....++ -+-.+......+..+++.++-|++.||+
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw-GVGsNsL~LpvPstcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW-GVGSNSLHLPVPSTCPDGFKLLLKQCWNS 350 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE-eccCCcccccCcccCchHHHHHHHHHHhc
Confidence 999999999987766 8999999999999999999999998744332221 1122223334566678999999999998
Q ss_pred CCCCCCCHHHHhcCccc
Q 022956 261 QPRARPSASELLKDPFF 277 (289)
Q Consensus 261 dp~~Rps~~~il~h~~~ 277 (289)
.|.+||++++||.|--+
T Consensus 351 KpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 351 KPRNRPSFRQILLHLDI 367 (904)
T ss_pred CCCCCccHHHHHHHHhh
Confidence 99999999999999543
No 199
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.2e-42 Score=289.40 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=199.3
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 97 (289)
|++.++||+|+||.||++.+..++..+|+|.++.... ... .....+|+..++++. |+|++++++.+.+...+.+++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK--SLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC--Cch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 3678999999999999999999999999999875432 112 123346788888885 999999999987665568999
Q ss_pred EeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 98 ITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|+||+.+ +|.+.+.. ...+++..+..++.|++.||.+||+.| ++|+||+|+||+++. +.++|+|||++......
T Consensus 78 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 78 VFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD--DILKLADFGSCRGIYSK 152 (282)
T ss_pred EEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC--CCeEEEecccccccccC
Confidence 9999976 77777765 457899999999999999999999999 999999999999998 79999999999876544
Q ss_pred cccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC---------------
Q 022956 177 HAAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK--------------- 239 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 239 (289)
.......++..|+|||.+. +.++.++|+|||||++++|++|..||.+....+...........
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 4434455788999999653 33788999999999999999999999875543322221110000
Q ss_pred CC-----------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 240 PQ-----------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 240 ~~-----------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.. ......+..+.+++.+||. +|++||++++++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00 0012347899999999998 99999999999999997
No 200
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.6e-41 Score=281.59 Aligned_cols=249 Identities=32% Similarity=0.587 Sum_probs=209.0
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|.+.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+..++.++|++++++++.+... ...+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l~ 75 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIV 75 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEE
Confidence 3578999999999999999998999999999986532 3467888999999999999999999987554 678999
Q ss_pred eccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+||+++++|.+++... ..+++..+..++.|++.++.+||+.| ++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSD-GEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccC-CeEEEeeccccccccccc
Confidence 9999999999999876 67999999999999999999999999 9999999999999988 899999999998776543
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
......++..|+|||.+.+. ++.++|+||||+++++|++|..||..........................+..+.+++.
T Consensus 153 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (253)
T cd05122 153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLK 232 (253)
T ss_pred cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHH
Confidence 23445678899999976644 78899999999999999999999987544444333333222222222223788999999
Q ss_pred HHHc-CCCCCCCHHHHhcCcc
Q 022956 257 KCIA-QPRARPSASELLKDPF 276 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~h~~ 276 (289)
.||+ ||++|||+.++++|||
T Consensus 233 ~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHccCChhhCCCHHHHhcCCC
Confidence 9998 9999999999999998
No 201
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1e-41 Score=283.93 Aligned_cols=249 Identities=27% Similarity=0.524 Sum_probs=211.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||.|++|.||++.+..++..+++|++..... .......+.+|+++++.++|+|++++.+.+... ...++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~lv~ 78 (258)
T cd08215 3 EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLCIVM 78 (258)
T ss_pred eEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEEEEE
Confidence 678999999999999999999999999999987543 345567788999999999999999999988654 6899999
Q ss_pred ccccCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 100 EVCTSGNLRTYRKKH----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
|++++++|.+++... ..+++..+..++.+++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSN-GLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCC-CcEEECCccceeeccc
Confidence 999999999998763 77999999999999999999999999 9999999999999988 8999999999977654
Q ss_pred cc-ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 176 SH-AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 176 ~~-~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
.. ......+++.|+|||...+. ++.++|+||+|+++++|++|..||................ ....+...+..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 233 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ--YPPIPSQYSSELRN 233 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC--CCCCCCCCCHHHHH
Confidence 43 22334678899999976544 8889999999999999999999998755444333333322 23344467889999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
++..||. +|++||++.++|.||||
T Consensus 234 ~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 234 LVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHcCCChhhCcCHHHHhcCCCC
Confidence 9999998 99999999999999997
No 202
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.4e-43 Score=293.94 Aligned_cols=255 Identities=27% Similarity=0.497 Sum_probs=210.3
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
..| +..+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|++.+++++|+|++++++.+... +.+
T Consensus 4 ~~y-~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 77 (277)
T cd06642 4 ELF-TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG--TKL 77 (277)
T ss_pred HHH-HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc---chHHHHHHHHHHHHHHcCCCCccHhhhcccccC--Cce
Confidence 344 46788999999999999999999999999987543 234467889999999999999999999988543 679
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++|+||+++++|.+++.. ..+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+ +.++++|||++.....
T Consensus 78 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTD 153 (277)
T ss_pred EEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCC-CCEEEccccccccccC
Confidence 999999999999998875 56899999999999999999999999 9999999999999988 8999999999876543
Q ss_pred ccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 176 SHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 176 ~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
... .....++..|+|||.+.+. ++.++|+||||+++++|++|..||.......... .+..... .......+..+.+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 231 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-LIPKNSP-PTLEGQYSKPFKE 231 (277)
T ss_pred cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-hhhcCCC-CCCCcccCHHHHH
Confidence 322 2233567889999977654 8889999999999999999999997644333322 2222222 2233456788999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
++.+||+ +|++||++.+++.||||.....
T Consensus 232 li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06642 232 FVEACLNKDPRFRPTAKELLKHKFITRYTK 261 (277)
T ss_pred HHHHHccCCcccCcCHHHHHHhHHHHHHhh
Confidence 9999998 9999999999999999987654
No 203
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2e-41 Score=289.99 Aligned_cols=261 Identities=27% Similarity=0.456 Sum_probs=213.0
Q ss_pred ceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEE
Q 022956 9 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWL 88 (289)
Q Consensus 9 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 88 (289)
+...++..+| ++.++||+|+||+||+|.+..+|+.||+|++...... .......+.+|+++++.++|||++++++.+.
T Consensus 8 ~~~~~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~ 85 (307)
T cd06607 8 FSKDDPEKLF-TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL 85 (307)
T ss_pred hcCCCcchhh-hhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE
Confidence 4445677776 6789999999999999999999999999998754322 3444567889999999999999999999886
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
.. +..++|+||+.| ++.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+||
T Consensus 86 ~~--~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~-~~~kL~df 159 (307)
T cd06607 86 RE--HTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEP-GTVKLADF 159 (307)
T ss_pred eC--CeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCC-CCEEEeec
Confidence 54 578999999976 77777653 457999999999999999999999999 9999999999999998 89999999
Q ss_pred CCccccCCccccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
|++...... ....+++.|+|||.+. +.++.++|+||||+++|+|++|..||.+.......... .....+...
T Consensus 160 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~ 235 (307)
T cd06607 160 GSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-AQNDSPTLS 235 (307)
T ss_pred CcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH-hcCCCCCCC
Confidence 988755432 2345678899999653 34888999999999999999999999875554443333 333333333
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
....+..+.+++.+||. ||++||++.+++.||||..-.
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 236 SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 33457889999999998 999999999999999998754
No 204
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-41 Score=288.60 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=198.1
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
.+.| ++.+.||+|+||.||++.+..+|..||+|.+....... ....+.+|+.+++.++|+|++++++.+... ..
T Consensus 4 ~~~y-~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~ 77 (291)
T cd07870 4 ATSY-LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG---VPFTAIREASLLKGLKHANIVLLHDIIHTK--ET 77 (291)
T ss_pred ccee-EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC---CcHHHHHHHHHHHhcCCCCEeEEEEEEecC--Ce
Confidence 4555 68999999999999999999999999999997653221 133556799999999999999999987543 67
Q ss_pred eEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 95 LNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.++|+||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 78 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~ 153 (291)
T cd07870 78 LTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYL-GELKLADFGLARAK 153 (291)
T ss_pred EEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCC-CcEEEecccccccc
Confidence 8999999965 67666654 456788899999999999999999999 9999999999999988 89999999998754
Q ss_pred CCccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC--------------
Q 022956 174 GRSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG-------------- 236 (289)
Q Consensus 174 ~~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-------------- 236 (289)
..... .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||...............
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 33221 223456889999997754 3788999999999999999999999765433222211110
Q ss_pred -CC---C-------CC-----CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 237 -GV---K-------PQ-----ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 237 -~~---~-------~~-----~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.. . +. ......++.+.+++.+|++ ||.+|||+.|++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00 0 00 0001125688999999998 99999999999999997
No 205
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-41 Score=285.72 Aligned_cols=256 Identities=27% Similarity=0.488 Sum_probs=209.0
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||.||+|.++.++..||+|.+...... .......+.+|+++++.++|||++++++.+... +..
T Consensus 2 ~~~-~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 77 (267)
T cd08228 2 ANF-QIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM-DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--NEL 77 (267)
T ss_pred cce-eeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC-CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--CeE
Confidence 344 6899999999999999999999999999998754332 345566788999999999999999999988654 578
Q ss_pred EEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 96 NFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++++||+++++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~d~g~~~ 154 (267)
T cd08228 78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCC-CCEEECccccce
Confidence 999999999999988853 345899999999999999999999999 9999999999999988 899999999987
Q ss_pred ccCCccc-cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHhCCCCCCCCCCCCC
Q 022956 172 IVGRSHA-AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECD-SVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 172 ~~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
....... .....+++.|+|||.+.+ .++.++|+||||+++++|++|+.||.... +.......+.....+.......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS 234 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcC
Confidence 6643322 223457789999997654 48889999999999999999999996533 23344444444444444444567
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
..+.+++.+||+ +|++||++.++++ .++++
T Consensus 235 ~~~~~li~~cl~~~p~~Rp~~~~vl~--~~~~~ 265 (267)
T cd08228 235 EKLRELVSMCIYPDPDQRPDIGYVHQ--IAKQM 265 (267)
T ss_pred HHHHHHHHHHCCCCcccCcCHHHHHH--HHHHh
Confidence 889999999998 9999999999998 55443
No 206
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.3e-42 Score=296.77 Aligned_cols=264 Identities=27% Similarity=0.450 Sum_probs=206.5
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.++||+|++|.||+|.++.+|+.||+|.+.... .......+.+|+.+++.++|+|++++++++....
T Consensus 3 ~~~~y-~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 3 VGPRY-QNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE 78 (336)
T ss_pred cccce-EEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence 34666 68999999999999999999999999999986422 2334566788999999999999999998764332
Q ss_pred -CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 -HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 -~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
...+++++||+.+ +|.+.+.. ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++
T Consensus 79 ~~~~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~ 153 (336)
T cd07849 79 SFNDVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTN-CDLKICDFGLA 153 (336)
T ss_pred ccceEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEECcccce
Confidence 2468999999976 88877754 56999999999999999999999999 9999999999999988 89999999998
Q ss_pred cccCCccc----cccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh--CC-----
Q 022956 171 AIVGRSHA----AHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GG----- 237 (289)
Q Consensus 171 ~~~~~~~~----~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~----- 237 (289)
........ .....+++.|+|||... ..++.++|+||||+++++|++|+.||.+............ ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 76543221 12245788999999653 3488899999999999999999999976433221111100 00
Q ss_pred ---------------CC-C-----CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 238 ---------------VK-P-----QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 238 ---------------~~-~-----~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
.. . .......++.+.+++.+||+ ||++||++.+++.||||+....+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~ 304 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDE 304 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCc
Confidence 00 0 00112346789999999998 99999999999999999988765443
No 207
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.3e-42 Score=299.22 Aligned_cols=266 Identities=26% Similarity=0.443 Sum_probs=211.9
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC--CC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD--QH 92 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 92 (289)
+.+| .+.+.||+|++|.||++.++.+|..||+|++..... .......+.+|+.++++++|||++++++.+... ..
T Consensus 4 ~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 4 GSRY-KPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD--VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADF 80 (334)
T ss_pred hhce-eeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc--cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCC
Confidence 3555 578999999999999999999999999999875432 223456677899999999999999998876532 23
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
..+++|+||+.+ +|.+++.....+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~dfg~~~~ 156 (334)
T cd07855 81 KDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNED-CELRIGDFGMARG 156 (334)
T ss_pred ceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEeccccccee
Confidence 578999999965 89999987778999999999999999999999999 9999999999999998 8999999999876
Q ss_pred cCCccc-----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh----------
Q 022956 173 VGRSHA-----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT---------- 235 (289)
Q Consensus 173 ~~~~~~-----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~---------- 235 (289)
...... .....++..|+|||.+.+ .++.++|+||||+++++|++|..||.+............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 533221 123467889999997643 378899999999999999999999976443222111110
Q ss_pred -------------CCCCCC-----CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 236 -------------GGVKPQ-----ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 236 -------------~~~~~~-----~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
...... ......++.+.+++.+||+ ||++||++++++.||||++...+..++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~ 307 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEP 307 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccc
Confidence 000000 0112357889999999998 999999999999999999987777654
No 208
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-44 Score=309.87 Aligned_cols=263 Identities=27% Similarity=0.490 Sum_probs=227.0
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.++|.+.. .|..-||.|+||+||+|+++.++..-|-|++... .++..+.+.-|+++|..+.||+|+++++.|+.+
T Consensus 27 dlnP~d~W-eIiGELGDGAFGKVyKA~nket~~lAAaKvIetk----seEELEDylVEIeILa~CdHP~ivkLl~ayy~e 101 (1187)
T KOG0579|consen 27 DLNPRDHW-EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK----SEEELEDYLVEIEILAECDHPVIVKLLSAYYFE 101 (1187)
T ss_pred cCCHHHHH-HHHhhhcCccchhhhhhhcccchhhhhhhhhccc----chhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc
Confidence 34455554 5677899999999999999999988999999754 566688899999999999999999999988877
Q ss_pred CCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
+.++++.|||.||-....+-. +..|++.++.-+.+|++.||.|||+++ ++|+|||..|||++-+ |.++|+|||.
T Consensus 102 --nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~Tld-GdirLADFGV 176 (1187)
T KOG0579|consen 102 --NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLD-GDIRLADFGV 176 (1187)
T ss_pred --CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEec-CcEeeecccc
Confidence 569999999999988777654 678999999999999999999999999 9999999999999999 9999999999
Q ss_pred ccccCCc-cccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 170 AAIVGRS-HAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
+...... ....+..|||.|||||+.- .+|+.++||||||+++.+|..+..|.........+..+-.+.++...
T Consensus 177 SAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLl 256 (1187)
T KOG0579|consen 177 SAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLL 256 (1187)
T ss_pred cccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCccc
Confidence 8654332 3355678999999999553 34899999999999999999999999988888888877766665555
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.+..-+..+++++..||. ||..||++.++|+||||.+.+-+
T Consensus 257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 257 QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 556667889999999997 99999999999999999987644
No 209
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.9e-42 Score=299.54 Aligned_cols=246 Identities=26% Similarity=0.408 Sum_probs=198.8
Q ss_pred cceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 92 (289)
+++.+.||+|+||.||+|.+..+ +..||+|.++... .......+.+|+.+++.+ +|+||+++++.+...
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA---HTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC---CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 46889999999999999986544 3579999997543 233466788999999999 899999999987544
Q ss_pred CeeEEEeccccCCcHHHHHHhc----------------------------------------------------------
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH---------------------------------------------------------- 114 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~---------------------------------------------------------- 114 (289)
..+++||||+++++|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 5799999999999999988532
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc---c
Q 022956 115 ------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA---A 179 (289)
Q Consensus 115 ------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~---~ 179 (289)
.++++.++..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~-~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDG-RVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCC-CeEEEeeceeeeeccCCcceeec
Confidence 24788899999999999999999999 9999999999999988 8999999999876533221 1
Q ss_pred ccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
....++..|+|||.+. +.++.++||||||+++|+|++ |..||............+.....+ ..+...++.+.+++.+
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 350 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM-SRPDFAPPEIYSIMKM 350 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc-cCCCCCCHHHHHHHHH
Confidence 1223456799999665 458999999999999999997 999998765544444554443322 2344568999999999
Q ss_pred HHc-CCCCCCCHHHHhc
Q 022956 258 CIA-QPRARPSASELLK 273 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~ 273 (289)
||+ ||++|||+.++++
T Consensus 351 cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 351 CWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 998 9999999999987
No 210
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=274.50 Aligned_cols=252 Identities=25% Similarity=0.471 Sum_probs=210.8
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEEec
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
..-||.|+.|.|+++....+|...|||.+.... +.+..+++...+++..... .|+||+++++|.... .+++.||
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~--dV~IcMe 171 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT--DVFICME 171 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc--hHHHHHH
Confidence 356999999999999999999999999998764 5666888888888876665 799999999997764 5788899
Q ss_pred cccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 101 VCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 101 ~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
.+.. .+..++.. .+++++.-+-++...+++||.||.. ++ ++|||+||+|||+|.. |++||||||.+.+..+...
T Consensus 172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~-GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDER-GNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccC-CCEEeecccccceeecccc
Confidence 9855 66666654 4679999999999999999999955 47 9999999999999999 9999999999998888777
Q ss_pred cccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC-CCCChHHHH
Q 022956 179 AHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN-KVKDPEVKA 253 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 253 (289)
.....|-+.|||||.++- .|+.++||||||++++||.||+-||.+...+-...-.+....++.... ...++.+.+
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~ 327 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQS 327 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHH
Confidence 777889999999997763 388899999999999999999999998654444444444443333222 236899999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
++..||+ |+.+||...++|+|||+...+-
T Consensus 328 fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 328 FVKDCLTKDHRKRPKYNKLLEHPFIKRYET 357 (391)
T ss_pred HHHHHhhcCcccCcchHHHhcCcceeecch
Confidence 9999998 9999999999999999876643
No 211
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=294.05 Aligned_cols=251 Identities=27% Similarity=0.511 Sum_probs=216.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.++++||+|+||.||++.|+++|+.+|||.+... ...+++..|+.++++++.|++|+.++.|+.. ..+|+||
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~--sDLWIVM 107 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH--SDLWIVM 107 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccC--CceEeeh
Confidence 4688999999999999999999999999999853 3377888999999999999999999999765 4699999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
|||..||..+.+.- +++|++.++..+++..+.||+|||... -+|||||..|||++.+ |..||+|||.+..+.+.-
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~-G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTD-GIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEccc-chhhhhhccccchhhhhHH
Confidence 99999999999874 578999999999999999999999998 8999999999999999 999999999998775432
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC-CCCCChHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL-NKVKDPEVKAFI 255 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li 255 (289)
+.....|||-|+|||+.... |+-.+||||||++..+|..|+.||.+..+...+. .+..++++... +..-+..+.+++
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF-MIPT~PPPTF~KPE~WS~~F~DFi 263 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF-MIPTKPPPTFKKPEEWSSEFNDFI 263 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-eccCCCCCCCCChHhhhhHHHHHH
Confidence 34556899999999977654 9999999999999999999999999876665443 23344333222 222366889999
Q ss_pred HHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 256 EKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
++||- .|++|.++.++++|||+++...
T Consensus 264 ~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 264 RSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred HHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 99996 9999999999999999998643
No 212
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.8e-41 Score=280.86 Aligned_cols=249 Identities=32% Similarity=0.560 Sum_probs=213.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|++|.||++.+..+++.+++|.+..... .....+.+.+|++++++++|+|++++++.+... +..++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI--KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS--DSLYIIL 78 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc--CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC--CEEEEEE
Confidence 578999999999999999999999999999987643 245567899999999999999999999887554 6799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
|++++++|.+++.....+++..+..++.|++.++.+||+.| ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKD-GVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCC-CCEEEeccccceecCCCccc
Confidence 99999999999988888999999999999999999999999 9999999999999987 8999999999987754433
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....++..|+|||...+. ++.++|+|+||+++++|++|..||................. ...+...++.+++++.+
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH--PPLPEGISPELKDFLMQ 233 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC--CCCCCCCCHHHHHHHHH
Confidence 2334578899999976544 78899999999999999999999987665554444443322 23455678999999999
Q ss_pred HHc-CCCCCCCHHHHhcCccc
Q 022956 258 CIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~h~~~ 277 (289)
||. +|++||++.+++.||||
T Consensus 234 ~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHhCChhhCcCHHHHhcCCCC
Confidence 998 99999999999999997
No 213
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.7e-42 Score=290.47 Aligned_cols=259 Identities=23% Similarity=0.384 Sum_probs=205.9
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+| ++.+.||.|++|+||++.++.+|+.||+|.+..... .....+.+.+|++++++++|||++++++.+... ...+
T Consensus 3 ~y-~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 77 (294)
T PLN00009 3 QY-EKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE--KRLY 77 (294)
T ss_pred ce-EEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEecC--CeEE
Confidence 44 678999999999999999999999999999876533 223346678899999999999999999988544 6899
Q ss_pred EEeccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 97 FITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|+||+++ +|.+++.... .+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+.+.++|+|||++....
T Consensus 78 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 78 LVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred EEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 99999965 7888776543 3578889999999999999999999 99999999999998654689999999997654
Q ss_pred Cccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC--CCCCC--------
Q 022956 175 RSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG--GVKPQ-------- 241 (289)
Q Consensus 175 ~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~-------- 241 (289)
.... .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||..........+.... .....
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 3222 223456789999997654 3788999999999999999999999876555444433211 00000
Q ss_pred ----------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 242 ----------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 242 ----------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
......++.+.+++.+||+ +|++||++.+++.||||++++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~~ 293 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDA 293 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhcC
Confidence 0112357789999999998 99999999999999999988653
No 214
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.3e-42 Score=289.27 Aligned_cols=250 Identities=26% Similarity=0.403 Sum_probs=203.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||.|++|.||++.++.+|..||+|++..... .......+.+|+++++.++|||++++++.+... ...++++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~--~~~~iv~ 77 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPSTAIREISLLKELNHPNIVRLLDVVHSE--NKLYLVF 77 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhHHHHHHHHHHhcCCCCccCHhheeccC--CeEEEEE
Confidence 568999999999999999999999999999986543 223345677899999999999999999987543 6899999
Q ss_pred ccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+. ++|.+++.... .+++..+..++.|++.||.+||+++ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDRE-GALKLADFGLARAFGVPV 153 (283)
T ss_pred eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCC-CcEEEeecccccccCCCc
Confidence 9996 58999987755 6899999999999999999999999 9999999999999997 899999999987554322
Q ss_pred c-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC----------------
Q 022956 178 A-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV---------------- 238 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---------------- 238 (289)
. .....+++.|+|||.+.+ .++.++|+||||+++|+|++|+.||.................
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 2 122345788999997654 368899999999999999999999987655444433222110
Q ss_pred ----------CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 239 ----------KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 239 ----------~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.........++.+.+++.+||+ ||++||++++++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0011123456889999999998 99999999999999998
No 215
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-41 Score=285.61 Aligned_cols=247 Identities=19% Similarity=0.286 Sum_probs=200.2
Q ss_pred cccceeeeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
.-+++.+.||+|+||.||++.++ ..+..+|+|.++... .......+.+|+..+++++|||++++++.+.. ++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CC
Confidence 33478999999999999999765 456789999997542 33445678899999999999999999998754 36
Q ss_pred eeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
..++||||+++++|.+++... ..+++.++..++.|++.||+|||+.| ++|+||+|+||+++.+ +.++++|||.+..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~-~~~~l~dfg~~~~ 156 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSD-LVCKISGFRRLQE 156 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCC-CcEEECCCccccc
Confidence 799999999999999999763 57899999999999999999999999 9999999999999988 8999999998765
Q ss_pred cCCcccc--ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 173 VGRSHAA--HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 173 ~~~~~~~--~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
....... ....++..|+|||.+.+ .++.++|||||||+++++++ |..||.+..... ....+..+.... .+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 234 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-VIKAVEDGFRLP-APRNCP 234 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHHCCCCCC-CCCCCC
Confidence 4322111 12234568999997654 48999999999999999875 999998755443 344444443322 345578
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+.+++.+||+ +|++||++++|++
T Consensus 235 ~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 235 NLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 899999999998 9999999999986
No 216
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-41 Score=298.86 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=199.5
Q ss_pred cceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 92 (289)
+++.++||+|+||+||+|.+ ..++..||+|+++... .....+.+.+|+.+++.+ +||||+++++.+...
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 36789999999999999963 4567789999997443 233456788899999999 899999999987443
Q ss_pred CeeEEEeccccCCcHHHHHHhc----------------------------------------------------------
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH---------------------------------------------------------- 114 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~---------------------------------------------------------- 114 (289)
...++||||+++|+|.+++...
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 5789999999999999988642
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 115 -----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 115 -----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
..+++..+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHG-RITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECC-CcEEEecCccceeccCcc
Confidence 14678889999999999999999999 9999999999999988 899999999997654322
Q ss_pred c---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 178 A---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 178 ~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
. .....++..|+|||.+.+ .++.++|+||||+++|+|++ |..||..........+.+..+.... .+...+.+++
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 347 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML-SPECAPSEMY 347 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC-CCCCCCHHHH
Confidence 1 112234567999997654 48999999999999999998 8999987665555555555543322 2345678999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+|+.+||+ ||++||++.+|++
T Consensus 348 ~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 348 DIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred HHHHHHccCChhHCcCHHHHHH
Confidence 99999998 9999999999987
No 217
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.9e-43 Score=303.34 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=225.6
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
..-+|.+.++||.|.|++|.++.+.-||..||||.+..... +......+.+|+++++.++||||++++.+...+ ..
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l--n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~--~~ 129 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL--NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE--AT 129 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc--ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec--ce
Confidence 33445788999999999999999999999999999998766 555556699999999999999999999998554 67
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|+||||+.++.+++++.+++++.+..+...+.|+++|++|||+++ ++|+|||++|++++.+ .++||+|||++.++.
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~-mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDEN-MNIKIADFGFSTFFD 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccc-cceeeeccccceeec
Confidence 9999999999999999999999999999999999999999999999 9999999999999999 789999999999999
Q ss_pred CccccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 175 RSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
......+++|++.|.|||++.+. -.+..|+||||+++|-|+.|.+||++..-..-.-..+.+. -.++...+.+..
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk---~rIp~~ms~dce 283 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK---YRIPFYMSCDCE 283 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee---ecccceeechhH
Confidence 88888999999999999988865 6778999999999999999999998743222222222222 224455678999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
++|+++|- +|.+|++.+++++|.|.......
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 99999998 99999999999999998766443
No 218
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.1e-41 Score=284.01 Aligned_cols=250 Identities=27% Similarity=0.495 Sum_probs=206.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|+||.||++.++.+|..+|+|.+..... .....+.+.+|+.++++++|+|++++++.+.. +...++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 78 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQE--NGRLFIVM 78 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheecc--CCeEEEEE
Confidence 578999999999999999999999999999987543 22335677889999999999999999988744 36899999
Q ss_pred ccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+...++++|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999999987543 5799999999999999999999999 99999999999998874457999999987664432
Q ss_pred c-cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 A-AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
. .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||..........+.......+ .....+..+++++
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i 234 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP--ISPNFSRDLRSLI 234 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC--CCCCCCHHHHHHH
Confidence 2 222357888999997654 48899999999999999999999998655444444433332221 2334578999999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+||. +|++||++.++++||||
T Consensus 235 ~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 235 SQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHhccChhhCcCHHHHhhCCCC
Confidence 99998 99999999999999997
No 219
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.9e-41 Score=289.80 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=195.0
Q ss_pred CcccceeeeecccCcceEEEEeec----------------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQ----------------EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 79 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~----------------~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 79 (289)
++| ++.++||+|+||.||+|.+. .++..||+|.+.... .......+.+|++++.+++|||
T Consensus 5 ~~~-~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 5 GHL-LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred hhC-eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCC
Confidence 455 68999999999999999753 234579999987542 3445677899999999999999
Q ss_pred eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhc-------------------CCCCHHHHHHHHHHHHHHHHHHhcCC
Q 022956 80 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH-------------------RHVSIKALKKWSKQVLEGLEYLHTHE 140 (289)
Q Consensus 80 i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~-------------------~~l~~~~~~~~~~ql~~~l~~lh~~~ 140 (289)
|+++++.+... +..+++|||+++++|.+++... ..+++..+..++.|++.||.|||+.|
T Consensus 81 iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 81 IIRLLGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred eeEEEEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999988654 5689999999999999998653 23677889999999999999999999
Q ss_pred CCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh
Q 022956 141 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT 216 (289)
Q Consensus 141 ~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t 216 (289)
++|+||+|+||+++.+ +.++|+|||++........ .....++..|+|||.+. +.++.++|+||||+++|+|++
T Consensus 159 --ivH~dlkp~Nill~~~-~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 159 --FVHRDLATRNCLVGEN-LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred --ccccCcchhheEEcCC-ccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999988 8999999999976533221 22234567899999755 458999999999999999987
Q ss_pred --CCCCCCCCCcHHHHHHHH---hCCC--CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 217 --MEIPYSECDSVAKIYKKV---TGGV--KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 217 --g~~p~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+..||............. .... .....+...++.+.+|+.+||. ||++|||+.+|.+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 567887654433322111 1111 1111234467899999999998 9999999999965
No 220
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.3e-42 Score=295.83 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=212.2
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 92 (289)
..++| .+.+.||+|+||.||+|.+..+|+.+|+|.+..... .......+.+|+.+++++ +||||+++++.+.....
T Consensus 5 ~~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 5 ILRKY-EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred hhhHH-HHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 34555 578999999999999999998999999999864321 233345677899999999 99999999998766555
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
..+++|+||+.+ +|.+++..+ .+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+..
T Consensus 82 ~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~-~~~kl~d~g~~~~ 156 (337)
T cd07852 82 KDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSD-CRVKLADFGLARS 156 (337)
T ss_pred ceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccchhc
Confidence 678999999976 999988875 7889999999999999999999999 9999999999999998 8999999999876
Q ss_pred cCCcc------ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC-----
Q 022956 173 VGRSH------AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK----- 239 (289)
Q Consensus 173 ~~~~~------~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~----- 239 (289)
..... ......++..|+|||.+.+ ..+.++|+||||+++++|++|+.||..................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 54322 1223457888999997643 3788999999999999999999999765544332222111100
Q ss_pred -----------------------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 240 -----------------------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 240 -----------------------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
........+..+.+++.+||+ ||++|||+.+++.||||.......+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~ 308 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEP 308 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCC
Confidence 001112257889999999998 999999999999999999987765554
No 221
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-41 Score=285.44 Aligned_cols=251 Identities=26% Similarity=0.492 Sum_probs=208.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|++.+++++|||++++++.+... ..+++|+
T Consensus 7 ~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 81 (277)
T cd06641 7 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLWIIM 81 (277)
T ss_pred hhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--CeEEEEE
Confidence 56889999999999999999899999999986543 234456788999999999999999999988554 6799999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-c
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-A 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-~ 178 (289)
||+++++|.+++.. ..+++..+..++.|++.++.+||+.| ++|+||+|+||+++.+ +.++++|||++....... .
T Consensus 82 e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 82 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCC-CCEEEeecccceecccchhh
Confidence 99999999999875 46899999999999999999999999 9999999999999988 899999999987654322 1
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....++..|+|||.+.+. ++.++|+||||+++++|++|..||......... ..+..... .......+..+.+++..
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL-FLIPKNNP-PTLEGNYSKPLKEFVEA 235 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH-HHHhcCCC-CCCCcccCHHHHHHHHH
Confidence 2234567889999976544 888999999999999999999999865443333 33333322 22344568899999999
Q ss_pred HHc-CCCCCCCHHHHhcCcccccCC
Q 022956 258 CIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
||. +|++||++.+++.||||.+..
T Consensus 236 ~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 236 CLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HccCChhhCcCHHHHHhCHHHhhhh
Confidence 998 999999999999999998753
No 222
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=286.96 Aligned_cols=256 Identities=23% Similarity=0.439 Sum_probs=221.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||+|.||+|-+++-+.+|+.||+|+++..... ..+....-..|-++|+..+||.+..+-..| +.+..+|+||
T Consensus 171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii-akdEVAHTlTE~RVL~~~~HPFLt~LKYsF--Qt~drlCFVM 247 (516)
T KOG0690|consen 171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVII-AKDEVAHTLTENRVLQNCRHPFLTSLKYSF--QTQDRLCFVM 247 (516)
T ss_pred hHHHHhcCCccceEEEEeecccCceeehhhhhhhhee-ehHHhhhhhhHHHHHHhccCcHHHHhhhhh--ccCceEEEEE
Confidence 4678999999999999999999999999999865443 344456677899999999999999888777 4447899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc-cCCccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI-VGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~-~~~~~~ 178 (289)
||..||.|.-+++..+-+++.....+...|++||.|||+++ ++.+|||.+|.++|.+ |.+|++|||++.. +.....
T Consensus 248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkD-GHIKitDFGLCKE~I~~g~t 324 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKD-GHIKITDFGLCKEEIKYGDT 324 (516)
T ss_pred EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccC-CceEeeecccchhcccccce
Confidence 99999999999998888999999999999999999999999 9999999999999999 9999999999964 345556
Q ss_pred cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
....||||.|+|||.+.. +|..+.|.|++|+++|+|++|++||.+.+... +...+.... ...+...+++++.|+..
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-LFeLIl~ed--~kFPr~ls~eAktLLsG 401 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-LFELILMED--LKFPRTLSPEAKTLLSG 401 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-HHHHHHhhh--ccCCccCCHHHHHHHHH
Confidence 778999999999998765 49999999999999999999999998855544 444443321 23566679999999999
Q ss_pred HHc-CCCCCC-----CHHHHhcCcccccCCCCC
Q 022956 258 CIA-QPRARP-----SASELLKDPFFSELNDDD 284 (289)
Q Consensus 258 ~l~-dp~~Rp-----s~~~il~h~~~~~~~~~~ 284 (289)
+|. ||.+|. ++.+|.+|+||+.++|.+
T Consensus 402 LL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 402 LLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred HhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 998 999994 689999999999998853
No 223
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.7e-41 Score=281.60 Aligned_cols=245 Identities=28% Similarity=0.485 Sum_probs=204.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|+||.||++.++.++..+|+|.++... .....+.+.+|+.+++.++|+|++++.+.+... ..+++++
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 77 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK---SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD--GHLYIVM 77 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc---chHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC--CEEEEEE
Confidence 67899999999999999999999999999997543 233467788899999999999999999988544 6899999
Q ss_pred ccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++.. ...+++..+..++.|++.||.+||++| ++|+||+|+||+++.+ +.++++|||.+.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCC-CcEEEcccCcceeecccc
Confidence 99999999998864 346899999999999999999999999 9999999999999988 899999999987664332
Q ss_pred c-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 178 A-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
. .....+++.|+|||.+.+. +++++|+||||+++++|++|..||........... +..+... ..+...+..+++++
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~li 232 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK-VCQGSYK-PLPSHYSYELRSLI 232 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH-HhcCCCC-CCCcccCHHHHHHH
Confidence 2 2234578899999987654 88899999999999999999999987544433333 3333222 23445678999999
Q ss_pred HHHHc-CCCCCCCHHHHhcC
Q 022956 256 EKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h 274 (289)
.+||+ ||++||++.+++.-
T Consensus 233 ~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 233 KQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHhCCcccCCCHHHHhhc
Confidence 99998 99999999999873
No 224
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.2e-42 Score=289.68 Aligned_cols=251 Identities=27% Similarity=0.440 Sum_probs=203.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|++|.||+|.++.+++.+|+|.+..... .....+.+.+|+++++.++|||++++++.+.. ....++|+
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 79 (286)
T cd07846 4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED--DKMVKKIAMREIRMLKQLRHENLVNLIEVFRR--KKRLYLVF 79 (286)
T ss_pred eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC--cchhhHHHHHHHHHHHhcCCcchhhHHHhccc--CCeEEEEE
Confidence 678999999999999999998999999999865432 22345678889999999999999999998843 46899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
||+++++|..+......+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CcEEEEeeeeeeeccCCccc
Confidence 99999999888777667999999999999999999999999 9999999999999998 8999999999876543322
Q ss_pred cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh--CCC----------------
Q 022956 179 AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GGV---------------- 238 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~---------------- 238 (289)
.....++..|+|||.+.+ .++.++|+||||+++++|++|..||......+....... ...
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 223456788999997654 367889999999999999999999976443332222111 000
Q ss_pred --CCC--------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 239 --KPQ--------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 239 --~~~--------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+. ......+..+.+|+.+||. +|++||++.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000 0112357789999999998 99999999999999998
No 225
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.8e-41 Score=283.56 Aligned_cols=243 Identities=21% Similarity=0.300 Sum_probs=193.6
Q ss_pred eeee--ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEE
Q 022956 21 YSDL--LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 21 ~~~~--lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 97 (289)
+.+. ||+|+||.||++.++.++..+|+|.+........ |+.....+ +|||++++++.+... +.+++
T Consensus 18 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---------e~~~~~~~~~h~~iv~~~~~~~~~--~~~~i 86 (267)
T PHA03390 18 IVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI---------EPMVHQLMKDNPNFIKLYYSVTTL--KGHVL 86 (267)
T ss_pred cccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh---------hHHHHHHhhcCCCEEEEEEEEecC--CeeEE
Confidence 4445 5999999999999999999999999976543211 11122222 699999999988654 57999
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||||+++++|.+++.....+++.++..++.|++.|+.+||+.| ++|+||+|+||+++.+.+.++|+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~- 163 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP- 163 (267)
T ss_pred EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence 9999999999999988778999999999999999999999999 9999999999999988239999999998765432
Q ss_pred ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh-CCCCCCCCCCCCChHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT-GGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li 255 (289)
....++..|+|||.+.+ .+++++|+||||+++++|++|..||.............. ............++.+.++|
T Consensus 164 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 241 (267)
T PHA03390 164 --SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFV 241 (267)
T ss_pred --ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHH
Confidence 22357889999997765 488899999999999999999999975433221111111 11122233446789999999
Q ss_pred HHHHc-CCCCCCC-HHHHhcCccccc
Q 022956 256 EKCIA-QPRARPS-ASELLKDPFFSE 279 (289)
Q Consensus 256 ~~~l~-dp~~Rps-~~~il~h~~~~~ 279 (289)
.+||+ +|.+||+ ++++|+||||++
T Consensus 242 ~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 242 QSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHHhccChhhCCchHHHHhcCCcccC
Confidence 99999 9999996 699999999975
No 226
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.8e-41 Score=290.41 Aligned_cols=258 Identities=24% Similarity=0.401 Sum_probs=201.1
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC-
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ- 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 91 (289)
+..++| ++.++||+|+||.||+|.+..+++.||+|.+..... .......+.+|++++++++|||++++++++....
T Consensus 9 ~~~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 9 DEVSKY-EKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred chhhhe-EEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC--cCCchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 345566 579999999999999999999999999999875432 2222345567999999999999999998875432
Q ss_pred -----CCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEe
Q 022956 92 -----HNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 165 (289)
Q Consensus 92 -----~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~ 165 (289)
....++|+||+.+ +|.+++... ..+++.++..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+
T Consensus 86 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~ 161 (310)
T cd07865 86 PYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKD-GILKLA 161 (310)
T ss_pred cccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCC-CcEEEC
Confidence 2457999999976 788777654 36899999999999999999999999 9999999999999988 899999
Q ss_pred ccCCccccCCcccc-----ccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHH--HHHhC
Q 022956 166 DLGFAAIVGRSHAA-----HSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIY--KKVTG 236 (289)
Q Consensus 166 d~g~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~--~~~~~ 236 (289)
|||++......... ....++..|+|||.+.+. ++.++|+||||+++++|++|..||.......... ..+.+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999766432221 223467789999976543 6789999999999999999999997644332211 11111
Q ss_pred CCCCC---------------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 237 GVKPQ---------------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 237 ~~~~~---------------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
..++. ......++.+.+++.+||. ||++|||++++++||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 11100 0111235678899999998 99999999999999998
No 227
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.6e-41 Score=288.79 Aligned_cols=256 Identities=26% Similarity=0.378 Sum_probs=201.8
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCC---
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQH--- 92 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~--- 92 (289)
+| ++.+.||+|+||.||++.+..+|+.||+|.++.... .......+.+|+.+++.+. |+|++++++.+...+.
T Consensus 2 ~y-~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 2 AY-EKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred Cc-eEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc--ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 44 578999999999999999999999999999876432 2223456788999999995 5999999988755432
Q ss_pred CeeEEEeccccCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
...++++||+++ +|.+++.. +..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+.+.++|+||
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeec
Confidence 247999999987 78888754 245799999999999999999999999 9999999999999983389999999
Q ss_pred CCccccCCccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC----
Q 022956 168 GFAAIVGRSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP---- 240 (289)
Q Consensus 168 g~~~~~~~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---- 240 (289)
|++........ .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||.+................+
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99876543222 222346788999997643 37889999999999999999999998765555444332211000
Q ss_pred ---------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 241 ---------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 241 ---------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
.......++.+.++|.+||. ||.+||++++++.||||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 00112357889999999998 999999999999999985
No 228
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.7e-41 Score=281.39 Aligned_cols=248 Identities=29% Similarity=0.492 Sum_probs=208.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|++|.||++.++.+++.+++|.+..... .......+.+|++.++.++|+|++++.+.+... ...++|+
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (256)
T cd08530 3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDG--NKLCIVM 78 (256)
T ss_pred eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC--CEEEEEe
Confidence 678999999999999999999999999999986543 334456778899999999999999999888554 6799999
Q ss_pred ccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 100 EVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
||+++++|.+++.. ...+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~-~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVAN-DLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecC-CcEEEeeccchhhhcc
Confidence 99999999999876 456899999999999999999999999 9999999999999998 8999999999977654
Q ss_pred ccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 176 SHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 176 ~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
. ......+++.|+|||.+.+. +++++|+||||+++++|++|..||........ ...+.....+ ......+..++++
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~l 232 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL-RYKVQRGKYP-PIPPIYSQDLQNF 232 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcCCCC-CCchhhCHHHHHH
Confidence 4 33335578899999976654 88899999999999999999999987654433 3333333222 2334568899999
Q ss_pred HHHHHc-CCCCCCCHHHHhcCccc
Q 022956 255 IEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+.+||. +|++||++.++++||++
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 233 IRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHcCCCcccCCCHHHHhcCCCC
Confidence 999998 99999999999999985
No 229
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.8e-42 Score=286.45 Aligned_cols=243 Identities=30% Similarity=0.537 Sum_probs=196.0
Q ss_pred eeeeecccCcceEEEEeec----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 21 YSDLLGSGAVKKVYRAFDQ----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+.+.||+|.||.||+|.+. ..+..|+||.++.. ......+.+.+|++.+++++||||+++++++... +..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~--~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN--EPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS--SSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc---cccccceeeeeccccccccccccccccccccccc--cccc
Confidence 5788999999999999887 45788999999542 2455578899999999999999999999998743 4589
Q ss_pred EEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 97 FITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|+||+++++|.+++... ..++..++..|+.|++.||.|||+++ ++|++|+++||+++.+ +.+||+|||++....
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~-~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSN-GQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETT-TEEEEESTTTGEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccc
Confidence 999999999999999886 78999999999999999999999999 9999999999999999 899999999998763
Q ss_pred Cc---cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 175 RS---HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 175 ~~---~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
.. ...........|+|||.+... ++.++||||||++++|+++ |+.||.+... ......+..+.... .+...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 232 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIEKLKQGQRLP-IPDNCPK 232 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHHHHHTTEETT-SBTTSBH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccce-eccchhH
Confidence 22 112334466789999987655 8999999999999999999 7899988744 44444444444333 3455688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.+++..||. ||++||++.+|++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999998 9999999999975
No 230
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-43 Score=303.72 Aligned_cols=261 Identities=27% Similarity=0.469 Sum_probs=225.5
Q ss_pred CceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeE
Q 022956 8 PFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVW 87 (289)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 87 (289)
.+..-||+..|.. .+-||+|+||.||.|.+..+.+.||||++...... ..+....+..|+++|++++|||.+..-++|
T Consensus 18 LF~k~DPEklf~d-LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ-s~EKWqDIlKEVrFL~~l~HPntieYkgCy 95 (948)
T KOG0577|consen 18 LFFKDDPEKLFSD-LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDILKEVRFLRQLRHPNTIEYKGCY 95 (948)
T ss_pred HHccCCHHHHHHH-HHHhcCCccceeEEeeccCccceeeeeeccccccc-cHHHHHHHHHHHHHHHhccCCCccccccee
Confidence 3556688888865 78899999999999999999999999999876543 455678899999999999999999999999
Q ss_pred EeCCCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 88 LDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
+.+ .+.|+|||||-| |-.|++.= .+++.+..+..|..+.+.||+|||+++ .+|+|||..|||+++. |.|||+|
T Consensus 96 Lre--~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~-g~VKLaD 169 (948)
T KOG0577|consen 96 LRE--HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEP-GLVKLAD 169 (948)
T ss_pred ecc--chHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCC-Ceeeecc
Confidence 876 579999999977 88888874 467999999999999999999999999 9999999999999999 9999999
Q ss_pred cCCccccCCccccccCCCCCCCCCCcc-cc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 167 LGFAAIVGRSHAAHSIIGTPEYMAPEL-YE---EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 167 ~g~~~~~~~~~~~~~~~~~~~~~aPE~-~~---~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
||.+..... ..+..|||-|||||+ +. |.|+-+.||||||++..++...+.|+.+......++.+- ++.+|..
T Consensus 170 FGSAsi~~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIA-QNesPtL 245 (948)
T KOG0577|consen 170 FGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTL 245 (948)
T ss_pred ccchhhcCc---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHH-hcCCCCC
Confidence 999986643 446789999999994 32 559999999999999999999999998877777766554 4444444
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
....-+..++.++..||+ -|.+|||.+++|+|+|+..-
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 444457889999999998 89999999999999998653
No 231
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.3e-41 Score=285.75 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=198.2
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+.| ++.+.||+|++|.||++.++.+++.||+|.+....... ....+.+|+++++.++|+||+++++++.. ++..
T Consensus 5 ~~y-~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~ 78 (291)
T cd07844 5 ETY-KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG---APFTAIREASLLKDLKHANIVTLHDIIHT--KKTL 78 (291)
T ss_pred cce-eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC---CchhHHHHHHHHhhCCCcceeeEEEEEec--CCeE
Confidence 455 67899999999999999999999999999997643211 12345679999999999999999998754 3689
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++|+||+.+ +|.+++... ..+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 79 ~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~ 154 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISER-GELKLADFGLARAKS 154 (291)
T ss_pred EEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCC-CCEEECccccccccC
Confidence 999999986 899988753 46899999999999999999999999 9999999999999998 899999999987543
Q ss_pred Cccc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC---CCC--------
Q 022956 175 RSHA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKP-------- 240 (289)
Q Consensus 175 ~~~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~-------- 240 (289)
.... .....++..|+|||.+.+ .++.++|+||||+++++|++|..||.+..........+... ...
T Consensus 155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred CCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence 2221 122345778999997653 37889999999999999999999997654222222111110 000
Q ss_pred --------------C---CCCCCCC--hHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 --------------Q---ALNKVKD--PEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 --------------~---~~~~~~~--~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
. ......+ ..+.+++.+||+ +|++||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0 0001123 778899999998 99999999999999998
No 232
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.4e-41 Score=285.20 Aligned_cols=244 Identities=22% Similarity=0.374 Sum_probs=201.2
Q ss_pred ceeeeecccCcceEEEEeecCCC-----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEG-----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++.+.||+|+||.||+|.+...+ ..+++|.++... .......+.+|++.+++++|||++++++.+... ..
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~ 82 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--QP 82 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--Cc
Confidence 67899999999999999876555 679999987432 345567789999999999999999999987543 57
Q ss_pred eEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC
Q 022956 95 LNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~ 158 (289)
.++++||+++++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGEG 160 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcCC
Confidence 89999999999999998754 45788999999999999999999999 9999999999999988
Q ss_pred CCcEEEeccCCccccCCcc---ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 022956 159 IGQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKK 233 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~ 233 (289)
+.++|+|||++....... ......+++.|+|||.+. +.+++++|+|||||++|+|++ |..||.+.... .....
T Consensus 161 -~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~ 238 (283)
T cd05048 161 -LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEM 238 (283)
T ss_pred -CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH
Confidence 899999999987553221 122334577899999655 458999999999999999998 99999875544 34444
Q ss_pred HhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 234 VTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+.....+. .+...++++.+|+.+||+ ||.+||++.+|++
T Consensus 239 i~~~~~~~-~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 239 IRSRQLLP-CPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred HHcCCcCC-CcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 44443332 345578999999999998 9999999999998
No 233
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-43 Score=302.96 Aligned_cols=242 Identities=26% Similarity=0.467 Sum_probs=204.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+.||+|+||+||+|.+-+ .||||++..... ..+..+.|++|+.++++-+|-||+-++|++... .+.||+
T Consensus 395 ~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p--t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p---~~AIiT 466 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP--TPEQLQAFKNEVAVLKKTRHENILLFMGACMNP---PLAIIT 466 (678)
T ss_pred hccceeccccccceeeccccc---ceEEEEEecCCC--CHHHHHHHHHHHHHHhhcchhhheeeehhhcCC---ceeeee
Confidence 467889999999999999853 599999998765 456789999999999999999999999998555 359999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc---CC
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV---GR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~---~~ 175 (289)
-||+|.+|..++.- ...+.......|++|+++|+.|||.++ |+|+|||..||++..+ ++|||+|||++..- ..
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHED-LKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccC-CcEEEecccceeeeeeecc
Confidence 99999999999863 346888999999999999999999999 9999999999999998 89999999999654 23
Q ss_pred ccccccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC---CCCCCCCCCCC
Q 022956 176 SHAAHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG---VKPQALNKVKD 248 (289)
Q Consensus 176 ~~~~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 248 (289)
........+...|+|||+.+. ++++.+||||+|+++|||++|.+||+ ....+++.=.+-++ .+........+
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~p 622 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCP 622 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCH
Confidence 333444567889999996542 38999999999999999999999999 45555555455555 22333444567
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.++++|+..||+ ++++||.+.+||.
T Consensus 623 k~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 623 KAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHHHHHHHHhcCcccCccHHHHHH
Confidence 799999999999 9999999999988
No 234
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.6e-41 Score=285.14 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=202.1
Q ss_pred CCcccceeeeecccCcceEEEEe----ecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAF----DQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.+||+++.+.||+|+||+||++. ...++..+|+|.++... .......+.+|+++++.++|||++++++.+...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ 78 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 46888889999999999998764 44578899999997542 233456788899999999999999999987665
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
....++++|||+.+++|.+++... .+++.++..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~ 154 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDND-RLVKIGDFGLA 154 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCC-CcEEEeecccc
Confidence 556789999999999999999764 5999999999999999999999999 9999999999999988 89999999998
Q ss_pred cccCCccc----cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcH--------------HHHH
Q 022956 171 AIVGRSHA----AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSV--------------AKIY 231 (289)
Q Consensus 171 ~~~~~~~~----~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~--------------~~~~ 231 (289)
........ .....++..|+|||...+ ..+.++|+||||+++++|++|..||...... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 155 KAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI 234 (283)
T ss_pred cccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence 76643222 112234567999997654 4899999999999999999999998643211 0111
Q ss_pred HHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 232 KKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
+.+...... ..+...+..+.+++..||+ ||++|||+++++. ++++
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~--~l~~ 280 (283)
T cd05080 235 ELLERGMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP--ILKE 280 (283)
T ss_pred hhhhcCCCC-CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH--HHHH
Confidence 111111111 1234467899999999999 9999999999997 5544
No 235
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.1e-41 Score=284.73 Aligned_cols=249 Identities=26% Similarity=0.417 Sum_probs=201.4
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|++|.||+|.++.+|..||+|+++.... ......+.+|+.+++.++|+|++++++.+... +..++|+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 77 (284)
T cd07836 3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLMLVF 77 (284)
T ss_pred eEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc---ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEEEE
Confidence 678999999999999999999999999999986543 22245567799999999999999999988654 5789999
Q ss_pred ccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 100 EVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~-~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKR-GELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CcEEEeecchhhhhcCC
Confidence 99986 888887653 35899999999999999999999999 9999999999999988 89999999999765432
Q ss_pred cc-cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-------------
Q 022956 177 HA-AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP------------- 240 (289)
Q Consensus 177 ~~-~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 240 (289)
.. .....++..|++||.+.+ .++.++|+||||+++++|++|..||.+................+
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 22 223456788999997654 36889999999999999999999998765444333322111000
Q ss_pred -------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 -------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 -------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......++.+++++.+||+ ||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00112347789999999998 99999999999999998
No 236
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=7e-41 Score=284.15 Aligned_cols=256 Identities=21% Similarity=0.359 Sum_probs=202.4
Q ss_pred CcccceeeeecccCcceEEEEeecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQE-----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
++| ++.++||+|+||.||+|.++. ++..||+|.+.... .......+.+|+.+++.++|+|++++++.+..
T Consensus 6 ~~~-~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~- 80 (288)
T cd05061 6 EKI-TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK- 80 (288)
T ss_pred HHc-eeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-
Confidence 344 689999999999999997542 35679999876432 23334567889999999999999999998744
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
+...+++|||+++++|.+++... ..++...+..++.|++.||.|||+++ ++|+||+|+||+++.+ +
T Consensus 81 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~-~ 156 (288)
T cd05061 81 -GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHD-F 156 (288)
T ss_pred -CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCC-C
Confidence 35789999999999999999742 23466788999999999999999999 9999999999999988 8
Q ss_pred cEEEeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHh
Q 022956 161 QVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVT 235 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~ 235 (289)
.++|+|||++........ .....++..|+|||.+.+ .++.++|+|||||++++|++ |..||.+....+ ....+.
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~ 235 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-VLKFVM 235 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Confidence 999999999875532211 112234668999997654 48999999999999999998 788998755444 333333
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc------CcccccCCC
Q 022956 236 GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK------DPFFSELND 282 (289)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~------h~~~~~~~~ 282 (289)
..... ..+...++.+++++.+||+ ||++|||+.++++ ||||.+++|
T Consensus 236 ~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 236 DGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred cCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 22222 1234457899999999998 9999999999988 999999886
No 237
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.6e-41 Score=286.48 Aligned_cols=249 Identities=28% Similarity=0.462 Sum_probs=208.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+.+.||+|++|.||++.+..+|+.+++|++...... .....+.+.+|+++++++. |+|++++++.+.. .+.++++
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~lv 80 (280)
T cd05581 4 KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI-KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD--EENLYFV 80 (280)
T ss_pred eEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc-chHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--CceEEEE
Confidence 6789999999999999999999999999999764432 2334567888999999998 9999999988744 3679999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||++++++|.+++.+.+.+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++++|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~-~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKD-MHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEecCCccccccCCccc
Confidence 999999999999998888999999999999999999999999 9999999999999988 8999999999876643321
Q ss_pred ---------------------cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC
Q 022956 179 ---------------------AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG 236 (289)
Q Consensus 179 ---------------------~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 236 (289)
.....++..|+|||..... ++.++|+||||++++++++|..||...............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 1223467899999976544 888999999999999999999999876544333333321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCH----HHHhcCccc
Q 022956 237 GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSA----SELLKDPFF 277 (289)
Q Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~----~~il~h~~~ 277 (289)
. ...+...++.+.+++..||+ +|++||++ ++++.||||
T Consensus 238 ~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 E---YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred C---CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1 12334458899999999998 99999999 999999997
No 238
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.3e-41 Score=284.80 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=204.9
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||+|++|.||+|.+..+|+.+|+|.+.... ........+.+|+++++.++|+|++++++.+........++|+
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 57899999999999999999999999999998764 1334456678899999999999999999988655346899999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
||+++ +|.+++... ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~-~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINND-GVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCC-CCEEEccccceeeccCCCc
Confidence 99986 888888765 57999999999999999999999999 9999999999999998 899999999998765443
Q ss_pred -ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--C-----------
Q 022956 178 -AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--Q----------- 241 (289)
Q Consensus 178 -~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~----------- 241 (289)
......++..|+|||.+.+ .+++++|+||||+++++|++|..||..................+ .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence 1223456778999996654 37889999999999999999999998755443333222211000 0
Q ss_pred ---------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 242 ---------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 242 ---------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
......++.+.+++.+||. +|++||++++++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0111137889999999998 99999999999999997
No 239
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-42 Score=295.54 Aligned_cols=259 Identities=26% Similarity=0.402 Sum_probs=206.5
Q ss_pred eCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeC
Q 022956 12 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDD 90 (289)
Q Consensus 12 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 90 (289)
+...++-|.+.++||.|+.+.||+|... +...||+|++..... ++.....+.+|+..|.+|+ |.+|++++++-..+
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~--D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d 432 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEA--DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD 432 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhc--CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC
Confidence 3455666788999999999999999764 446677777765443 6777889999999999995 79999999876654
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHV-SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l-~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
+++|+|||+-+. .|..++.+.... +.-.+..+..||+.|+.++|++| ++|-||||.|+++-. |.+||+|||.
T Consensus 433 --~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVk--G~LKLIDFGI 505 (677)
T KOG0596|consen 433 --GYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVK--GRLKLIDFGI 505 (677)
T ss_pred --ceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEe--eeEEeeeech
Confidence 699999999855 999999976433 33488899999999999999999 999999999999976 5899999999
Q ss_pred ccccCCccc---cccCCCCCCCCCCcccccC------------CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 022956 170 AAIVGRSHA---AHSIIGTPEYMAPELYEED------------YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKV 234 (289)
Q Consensus 170 ~~~~~~~~~---~~~~~~~~~~~aPE~~~~~------------~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~ 234 (289)
|........ ..+.+||+.||+||.+... .++++||||||||||+|+.|+.||......-.-...+
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI 585 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAI 585 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 987754322 4567899999999966311 5679999999999999999999998654333333333
Q ss_pred hCCCCCCCCCCCCCh-HHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 235 TGGVKPQALNKVKDP-EVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 235 ~~~~~~~~~~~~~~~-~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
..-.....++...+. ++.++++.||+ ||++||++.++|+|||+.-+
T Consensus 586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 332222233444444 49999999998 99999999999999999764
No 240
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.2e-41 Score=293.16 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=200.8
Q ss_pred CCcccceeeeecccCcceEEEEeecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEE
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQE-----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWL 88 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~ 88 (289)
.++| ++.+.||+|+||.||+|.+.. +++.||+|+++... .....+.+.+|+.++.++ +|+||+++++.+.
T Consensus 6 ~~~~-~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 6 RDRL-KLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---TASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred HHHh-hhhcccccCcCceEEeccccccccccccceeeeeeccCCC---CHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 4465 789999999999999997543 45789999997543 233456678899999999 7999999999776
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHhc------------------------------------------------------
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKKH------------------------------------------------------ 114 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~~------------------------------------------------------ 114 (289)
.. +..+++++||+++++|.+++...
T Consensus 82 ~~-~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 82 KP-GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred cC-CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 54 35788999999999999988531
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc---cccCCC
Q 022956 115 -------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIG 184 (289)
Q Consensus 115 -------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~ 184 (289)
.++++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++........ .....+
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~-~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCC-CcEEEeccccchhcccCcchhhccCCCC
Confidence 25789999999999999999999999 9999999999999988 8999999999986533221 222344
Q ss_pred CCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-C
Q 022956 185 TPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-Q 261 (289)
Q Consensus 185 ~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-d 261 (289)
+..|+|||.+. ..++.++|||||||++++|++ |..||.+..........+...... ..+...++.+.+++.+||+ +
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~ 316 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM-RAPEYATPEIYSIMLDCWHNN 316 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC-CCCccCCHHHHHHHHHHccCC
Confidence 66899999665 459999999999999999998 999998654444444444433222 2344567899999999998 9
Q ss_pred CCCCCCHHHHhcC
Q 022956 262 PRARPSASELLKD 274 (289)
Q Consensus 262 p~~Rps~~~il~h 274 (289)
|++||+++++++|
T Consensus 317 p~~RPs~~ell~~ 329 (337)
T cd05054 317 PEDRPTFSELVEI 329 (337)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999984
No 241
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.2e-41 Score=285.74 Aligned_cols=258 Identities=25% Similarity=0.403 Sum_probs=210.1
Q ss_pred cceeeeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCe
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 94 (289)
|++.+.||+|+||.||.|.+. .+|..||+|+++...........+.+.+|+++++++ +|++|+.+++.+.. +..
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~~ 79 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--DTK 79 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec--CCe
Confidence 367899999999999999874 478999999998654333344456788899999999 58999999887744 367
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++|+||+++++|.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~ 156 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSN-GHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCC-CCEEEeeCccceecc
Confidence 8999999999999999988888999999999999999999999999 9999999999999988 899999999987654
Q ss_pred Ccc--ccccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHhCCCCCCCCCCC
Q 022956 175 RSH--AAHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECD---SVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 175 ~~~--~~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~ 246 (289)
... ......++..|+|||...+ .++.++|+||||+++++|++|..||.... ........+.....+ .+..
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 234 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP--YPQE 234 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC--CCcc
Confidence 322 2223457889999997653 36789999999999999999999996432 223333333332222 2445
Q ss_pred CChHHHHHHHHHHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 247 KDPEVKAFIEKCIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
.++.+.+++++||. ||++|| ++++++.||||.+..|.
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 277 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWD 277 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHH
Confidence 68899999999998 999997 89999999999998753
No 242
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.1e-41 Score=291.32 Aligned_cols=263 Identities=27% Similarity=0.425 Sum_probs=210.5
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC-
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH- 92 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 92 (289)
..++| ++.+.||+|++|.||++.+..+|..||+|.+..... .......+.+|+.+++.++||||+++++.+.....
T Consensus 13 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 13 VPDRY-RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred cccce-EEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 45666 679999999999999999999999999999864322 34445678899999999999999999988754321
Q ss_pred ---CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 93 ---NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 93 ---~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
..+++|++++ +++|.+++.. ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~-~~~kl~dfg~ 164 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNED-CELKILDFGL 164 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeeccc
Confidence 2468999998 6689888875 56999999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP------- 240 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------- 240 (289)
+...... .....+++.|+|||.+.+ .++.++|+||||++++++++|..||.+.................
T Consensus 165 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 165 ARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred ccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 8765432 223456788999997654 37889999999999999999999998755443333222211000
Q ss_pred ---------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 241 ---------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 241 ---------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
.......++.+.+++.+||+ ||++||++.+++.||||+....+..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~ 310 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDE 310 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccc
Confidence 01123457789999999998 99999999999999999998665544
No 243
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.1e-41 Score=279.11 Aligned_cols=240 Identities=23% Similarity=0.390 Sum_probs=198.2
Q ss_pred eecccCcceEEEEee--cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 24 LLGSGAVKKVYRAFD--QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.||+|+||.||+|.+ +.++..+|+|+++.... +....+.+.+|+.+++.++|||++++++.+. ....++|+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--DPALKDELLREANVMQQLDNPYIVRMIGICE---AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---CCCcEEEEec
Confidence 599999999999964 56789999999875432 4556778999999999999999999998763 2457899999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc--
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-- 179 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~-- 179 (289)
+++++|.+++.....+++..+..++.|++.||.+||++| ++|+||+|.||+++.+ +.++|+|||++.........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~-~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 77 AELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQ-HYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCC-CeEEECCCccccccCCCCCeee
Confidence 999999999988788999999999999999999999999 9999999999999988 89999999999766433221
Q ss_pred --ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 180 --HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 180 --~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
....++..|+|||.+.. .++.++|+||||+++|+|++ |..||..... ......+..+..+ ..+...++.+.+++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~i~~~~~~-~~~~~~~~~l~~li 231 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQMIESGERM-ECPQRCPPEMYDLM 231 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHCCCCC-CCCCCCCHHHHHHH
Confidence 12233578999997664 48889999999999999998 9999986544 3444455554332 23455789999999
Q ss_pred HHHHc-CCCCCCCHHHHhc
Q 022956 256 EKCIA-QPRARPSASELLK 273 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~ 273 (289)
.+||+ ||++||++.+|..
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 232 KLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHhccCchhCcCHHHHHH
Confidence 99998 9999999999876
No 244
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.9e-41 Score=294.54 Aligned_cols=263 Identities=27% Similarity=0.428 Sum_probs=210.2
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| ++.+.||+|++|.||+|.+..++..||+|++..... .......+.+|+.++++++|+|++++.+.+...+
T Consensus 13 ~~~~y-~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 13 VPDRY-QNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL 89 (343)
T ss_pred ccCce-EEEEEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc
Confidence 45666 679999999999999999999999999999875422 2334566778999999999999999988764432
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...+++|+||+ +++|.+++.. .++++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~-~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNED-CELKILDFGL 164 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEccccc
Confidence 13589999999 5599999876 46999999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ------ 241 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------ 241 (289)
+...... .....++..|+|||...+ .++.++|+||||++++++++|..||.+................+.
T Consensus 165 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 165 ARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred ccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 9866433 223456788999997653 478899999999999999999999987555443333222111000
Q ss_pred ----------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 242 ----------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 242 ----------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
......++.+.+++.+||+ ||++|||+.+|+.||||+++..+..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~ 310 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE 310 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccc
Confidence 0011247889999999998 99999999999999999988665443
No 245
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.3e-41 Score=285.42 Aligned_cols=251 Identities=28% Similarity=0.474 Sum_probs=207.0
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
..+||+|+||.||++.++.+|+.+|+|++... .......+.+|+.+++.++|+|++++++.+... +..++++||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--CEEEEEEec
Confidence 36799999999999999999999999998643 233456788999999999999999999988554 689999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-ccc
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH-AAH 180 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~-~~~ 180 (289)
+++++|.+++.. ..+++..+..++.|++.++.+||+.| ++|+||+|+||+++.+ +.++|+|||++....... ...
T Consensus 99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~-~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEcccccceeccccccccc
Confidence 999999998765 45899999999999999999999999 9999999999999988 899999999886554322 223
Q ss_pred cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC-CCCCCCCChHHHHHHHHH
Q 022956 181 SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-QALNKVKDPEVKAFIEKC 258 (289)
Q Consensus 181 ~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~ 258 (289)
...+++.|+|||...+ .+++++|+||+|+++++|++|..||........ ...+....+. .......++.+.+++.+|
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 253 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPPKLKNLHKVSPSLKGFLDRL 253 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhhCCcccCCcccCCHHHHHHHHHH
Confidence 3457889999997654 488899999999999999999999986444333 3333332222 112334688999999999
Q ss_pred Hc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 259 IA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 259 l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
|. ||.+||++.+++.||||......
T Consensus 254 l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 254 LVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred HhCCcccCcCHHHHhcChHHhccCCC
Confidence 98 99999999999999999988753
No 246
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.8e-41 Score=278.33 Aligned_cols=241 Identities=22% Similarity=0.391 Sum_probs=196.2
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
+.||+|+||.||+|.++.+++.+|+|.+.... ..+....+.+|+++++.++|||++++++++... ..+++|+||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEeec
Confidence 46999999999999999999999999886432 345567789999999999999999999987543 5789999999
Q ss_pred cCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc--
Q 022956 103 TSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-- 179 (289)
Q Consensus 103 ~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~-- 179 (289)
++++|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 76 ~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 76 QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEK-NVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred cCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCC-CcEEECccccCccccccccccc
Confidence 999999998753 46899999999999999999999999 9999999999999988 89999999998754322111
Q ss_pred -ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 180 -HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 180 -~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.....+..|+|||.+.+. ++.++|+||||+++++|++ |..||....... ....+...... ..+...+..+.+++.
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~ 230 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-TREAIEQGVRL-PCPELCPDAVYRLME 230 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-HHHHHHcCCCC-CCcccCCHHHHHHHH
Confidence 111224569999976544 8889999999999999998 889997644433 33333333222 234456889999999
Q ss_pred HHHc-CCCCCCCHHHHhc
Q 022956 257 KCIA-QPRARPSASELLK 273 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~ 273 (289)
+||+ +|++|||+.++++
T Consensus 231 ~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 231 RCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 9998 9999999999986
No 247
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-43 Score=306.14 Aligned_cols=249 Identities=31% Similarity=0.518 Sum_probs=214.4
Q ss_pred eecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecccc
Q 022956 24 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCT 103 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 103 (289)
+||.|.||+||.|++..|....|||.+... +....+-+.+|+...++|+|.|||+.++.+ ++++++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek----dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~--senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK----DSREVQPLHEEIALHSTLRHKNIVRYLGSV--SENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc----cchhhccHHHHHHHHHHHhhHhHHHHhhcc--CCCCeEEEEeecCC
Confidence 499999999999999999999999999865 334467789999999999999999999987 55678999999999
Q ss_pred CCcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-Ccccc
Q 022956 104 SGNLRTYRKKH-RHV--SIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG-RSHAA 179 (289)
Q Consensus 104 ~~sL~~~~~~~-~~l--~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~-~~~~~ 179 (289)
||||.+++... +++ .+.....+..||++||.|||.+. ++|||||-+||+++.-+|.+||+|||-++... -.+.+
T Consensus 656 GGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred CCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 99999999864 667 78889999999999999999999 99999999999998877999999999998764 45557
Q ss_pred ccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
....||.-|||||+.+. +|.+++|||||||++.||.||+.||-.........-.+--....+.++...+.+.+.+|.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHH
Confidence 77889999999997763 399999999999999999999999987655544333322222334456667889999999
Q ss_pred HHHc-CCCCCCCHHHHhcCcccccC
Q 022956 257 KCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+|+. ||.+||++.++|.+||++.-
T Consensus 814 rcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHcCCCcccCccHHHhccCcccccC
Confidence 9999 99999999999999999865
No 248
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.5e-41 Score=291.83 Aligned_cols=265 Identities=26% Similarity=0.400 Sum_probs=209.3
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
..++| .+.+.||+|+||.||++.+..+|+.||+|++..... .....+.+.+|+.++++++||||+++++++....
T Consensus 15 ~~~~y-~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 15 VPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 91 (345)
T ss_pred ccCce-EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence 44666 679999999999999999999999999999975422 2333566788999999999999999998775321
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...++++++++ +++|.+++... .+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGL 166 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCC-CCEEEecccc
Confidence 23578888887 66998888754 5999999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC---------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV--------- 238 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--------- 238 (289)
+...... .....++..|+|||.+.+ .++.++|+|||||++++|++|..||............+....
T Consensus 167 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 167 ARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred ccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 8765332 223456788999997654 378899999999999999999999976544333222111100
Q ss_pred ----------------CCC---CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCC
Q 022956 239 ----------------KPQ---ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPS 288 (289)
Q Consensus 239 ----------------~~~---~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~ 288 (289)
... ......++.+.+++..||+ ||.+||++.+++.||||++...+...+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~ 314 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 314 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCcccc
Confidence 000 0011347789999999998 9999999999999999998877666654
No 249
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.7e-41 Score=279.21 Aligned_cols=242 Identities=25% Similarity=0.398 Sum_probs=203.7
Q ss_pred eeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++||+|+||.||+|.+... +..+++|.+..... ....+.+.+|++.++.++|+|++++++++.. ...+++++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS---EEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc---hhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEE
Confidence 4799999999999998866 89999999986543 2246788999999999999999999998855 46899999
Q ss_pred ccccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 100 EVCTSGNLRTYRKKH---------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 100 e~~~~~sL~~~~~~~---------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
||+++++|.+++... ..+++..+..++.|++.||.+||+++ ++|+||+|+||+++.+ +.++|+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~-~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGED-LVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCC-CcEEEcccccc
Confidence 999999999999875 78999999999999999999999999 9999999999999999 89999999999
Q ss_pred cccCCcc---ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 171 AIVGRSH---AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 171 ~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
....... ......++..|+|||.+.. .++.++|+||||+++++|++ |..||..... ......+..+... ..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~ 230 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLRKGYRL-PKPE 230 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCC-CCCc
Confidence 8765432 2334456789999997665 48899999999999999999 6999987643 3444444443322 2344
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
..++.+.+++.+||+ +|++|||+.+++++
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 231 YCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred cCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 568999999999998 99999999999974
No 250
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.8e-40 Score=278.18 Aligned_cols=251 Identities=30% Similarity=0.542 Sum_probs=205.8
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|++|.||+|.+..+|+.+|+|.++..... .....+.+.+|++++++++|++++++++.+... +..
T Consensus 2 ~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~--~~~ 77 (267)
T cd08224 2 GNF-KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-DAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN--NEL 77 (267)
T ss_pred Cce-eeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-chhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC--CeE
Confidence 355 6899999999999999999999999999999764432 334467889999999999999999999988654 678
Q ss_pred EEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 96 NFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++++||+++++|.+++.. ...+++.++..++.+++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++.
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~-~~~~l~d~~~~~ 154 (267)
T cd08224 78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITAT-GVVKLGDLGLGR 154 (267)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCC-CcEEEeccceee
Confidence 999999999999998864 345899999999999999999999999 9999999999999988 899999999987
Q ss_pred ccCCcc-ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHhCCCCCCCCCCCCC
Q 022956 172 IVGRSH-AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD-SVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
...... ......++..|.|||.+.+. ++.++|+||||+++++|++|..||.... +.......+..+..+.......+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYS 234 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcC
Confidence 654322 22334578889999976544 8889999999999999999999996532 33333444444333333333567
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+++++.+||. +|++||++.+|++
T Consensus 235 ~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 235 EELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 899999999998 9999999999886
No 251
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5.3e-41 Score=291.61 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=207.1
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC-
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH- 92 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 92 (289)
..++| .+.+.||+|+||.||+|.++.+|+.||+|++..... .+.....+.+|+++++.++|||++++++++.....
T Consensus 13 ~~~~y-~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 89 (342)
T cd07879 13 LPERY-TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG 89 (342)
T ss_pred cccce-EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccC
Confidence 34566 578999999999999999999999999999875432 23334567889999999999999999988754321
Q ss_pred ---CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 93 ---NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 93 ---~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
..+++++||+.. +|..++. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~-~~~kL~dfg~ 163 (342)
T cd07879 90 DEFQDFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNED-CELKILDFGL 163 (342)
T ss_pred CCCceEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCCC
Confidence 346899999965 7777653 45899999999999999999999999 9999999999999998 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC--------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK-------- 239 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------- 239 (289)
+...... .....++..|+|||.+.+ .++.++|+||||+++++|++|+.||.+..........+.....
T Consensus 164 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8754322 223456788999997654 3788999999999999999999999875544433322221100
Q ss_pred -------------CCC-------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 240 -------------PQA-------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 240 -------------~~~-------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
+.. .....++.+.+|+.+||+ ||++||++++++.||||+.....++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~ 310 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence 000 012346788999999998 999999999999999999997765443
No 252
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.4e-41 Score=277.88 Aligned_cols=244 Identities=27% Similarity=0.470 Sum_probs=206.5
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|++|.||++.++.+++.+++|.+...... .......+..|++++++++|+|++++++.+. .+...+++||++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII-KRKEVEHTLTERNILSRINHPFIVKLHYAFQ--TEEKLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc-chHHHHHHHHHHHHHHHcCCCcHHHHHHHee--cCCeeEEEEecCCC
Confidence 79999999999999989999999999865432 3345678899999999999999999998874 34689999999999
Q ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-cccccCC
Q 022956 105 GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS-HAAHSII 183 (289)
Q Consensus 105 ~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~-~~~~~~~ 183 (289)
++|.+++.....+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++...... .......
T Consensus 78 ~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 78 GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDAD-GHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCC-CcEEEeecCcceecccCCCcccCCc
Confidence 999999998878999999999999999999999999 9999999999999998 89999999999776543 2233456
Q ss_pred CCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-C
Q 022956 184 GTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-Q 261 (289)
Q Consensus 184 ~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-d 261 (289)
++..|++||...+. .+.++|+||||++++++++|..||..... ......+... ....+...+..+.+++.+||. |
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILKD--PLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhcCC
Confidence 78899999976544 78899999999999999999999976554 3333333332 223455568899999999998 9
Q ss_pred CCCCCCH---HHHhcCccc
Q 022956 262 PRARPSA---SELLKDPFF 277 (289)
Q Consensus 262 p~~Rps~---~~il~h~~~ 277 (289)
|++||++ ++++.||||
T Consensus 232 p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 232 PTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HhhCCCcccHHHHHhCCCC
Confidence 9999999 999999998
No 253
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=277.12 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=209.6
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeC--CCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDD--QHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~--~~~~~~lv~ 99 (289)
++||-|-.|+|-.+.++.||+.+|+|++.-. ...++|++..-.. .|||||.++++|.+. ..+.+.+||
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS---------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC---------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence 7899999999999999999999999999732 4456688776555 699999999998643 335778899
Q ss_pred ccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC--CcEEEeccCCccccCC
Q 022956 100 EVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLGFAAIVGR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~--~~~~l~d~g~~~~~~~ 175 (289)
|+++||.|+.-+++.+ .++++++..|+.||..|+.|||+.+ ++||||||+|+|...+. -.+||+|||+|+....
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 9999999999999865 4999999999999999999999999 99999999999996532 4699999999998887
Q ss_pred ccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHhCCC--CCCCCCCCCCh
Q 022956 176 SHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTGGV--KPQALNKVKDP 249 (289)
Q Consensus 176 ~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~ 249 (289)
.....+.+.||-|.|||.+..+ ++...|+||||+++|-|++|..||-+... .-.....+..+. -+..-+...|+
T Consensus 217 ~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe 296 (400)
T KOG0604|consen 217 PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSE 296 (400)
T ss_pred CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHH
Confidence 7777888999999999988765 99999999999999999999999964321 122233333332 23334556799
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+.+++|+++|+ +|.+|.++++++.|||+..-....
T Consensus 297 ~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp 332 (400)
T KOG0604|consen 297 AAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVP 332 (400)
T ss_pred HHHHHHHHHhcCCchhheeHHHhhcCchhcccccCC
Confidence 99999999999 999999999999999998765443
No 254
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=279.44 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=214.5
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.||+|+|+.|--++...+|..||||++.... ...+.++.+|++++.+. .|+||++++++|.++ ..+|+|||-
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~----gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd--~~FYLVfEK 157 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP----GHSRSRVFREVETFYQCQGHKNILQLIEFFEDD--TRFYLVFEK 157 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC----chHHHHHHHHHHHHHHhcCCccHHHHHHHhccc--ceEEEEEec
Confidence 77999999999999999999999999998763 34478899999999999 599999999998554 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC-C-CcEEEeccCCccccCC----
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN-I-GQVKIGDLGFAAIVGR---- 175 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~-~-~~~~l~d~g~~~~~~~---- 175 (289)
+.||+|...+.+...+++.++..+...|+.||.|||.+| +.|+|+||+|||-..- . .-||||||++......
T Consensus 158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 999999999999999999999999999999999999999 9999999999998543 1 3599999998765422
Q ss_pred ----ccccccCCCCCCCCCCccc---ccC---CCCcchHHHHHHHHHHHHhCCCCCCCCC--------------cHHHHH
Q 022956 176 ----SHAAHSIIGTPEYMAPELY---EED---YTEMVDIYSFGLCLLEMVTMEIPYSECD--------------SVAKIY 231 (289)
Q Consensus 176 ----~~~~~~~~~~~~~~aPE~~---~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~--------------~~~~~~ 231 (289)
.+...+.+|+..|||||+. .++ |+.+.|.||||+|+|-|++|..||.+.- =...+.
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 315 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence 1223345788899999954 343 8899999999999999999999997521 123345
Q ss_pred HHHhCCC--CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCCC
Q 022956 232 KKVTGGV--KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEPS 288 (289)
Q Consensus 232 ~~~~~~~--~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~~ 288 (289)
+.+..+. -|..-+..++.+.++|++.+|. |+.+|.++.+++.|||+.......--|.
T Consensus 316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalpt 375 (463)
T KOG0607|consen 316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPT 375 (463)
T ss_pred HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCCC
Confidence 5555542 2444566789999999999997 9999999999999999998865544433
No 255
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6e-41 Score=284.47 Aligned_cols=257 Identities=24% Similarity=0.406 Sum_probs=207.7
Q ss_pred ceeeeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCee
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 95 (289)
++.+.||+|++|.||++.+. .++..+|+|+++...........+.+.+|++++.++ +||+++++.+.+.. +..+
T Consensus 3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~--~~~~ 80 (288)
T cd05583 3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT--DTKL 80 (288)
T ss_pred eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec--CCEE
Confidence 67899999999999999753 467899999998654333344566788999999999 58999999987743 3678
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++|+||+.+++|.+++.....+++..+..++.|++.+|.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSE-GHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEEECcccccccc
Confidence 999999999999999987778999999999999999999999999 9999999999999988 8999999999876543
Q ss_pred ccc--cccCCCCCCCCCCcccccC---CCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHhCCCCCCCCCCCC
Q 022956 176 SHA--AHSIIGTPEYMAPELYEED---YTEMVDIYSFGLCLLEMVTMEIPYSECD---SVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 176 ~~~--~~~~~~~~~~~aPE~~~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
... .....++..|++||...+. .+.++|+||||+++++|++|..||.... ........+..... ..+...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 235 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP--PFPKTM 235 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--CCCccc
Confidence 222 2234578899999976543 6889999999999999999999996422 12222222322222 234446
Q ss_pred ChHHHHHHHHHHc-CCCCCCC---HHHHhcCcccccCCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPS---ASELLKDPFFSELNDD 283 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps---~~~il~h~~~~~~~~~ 283 (289)
+..+.+++.+||+ ||++||| +.++|.||||++++|+
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHH
Confidence 7899999999998 9999998 5778999999999886
No 256
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=8e-41 Score=280.53 Aligned_cols=248 Identities=30% Similarity=0.539 Sum_probs=204.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||++.++.+|..+++|.+...... +......+.+|+.+++.++|+|++++++.+... +..++++
T Consensus 5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~v~ 81 (267)
T cd08229 5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NELNIVL 81 (267)
T ss_pred hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-hHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--CeEEEEE
Confidence 6789999999999999999999999999998764432 344456788999999999999999999988654 5789999
Q ss_pred ccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 100 EVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 100 e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
||+++++|.+++.. ...+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CCEEECcchhhhcccc
Confidence 99999999998863 356899999999999999999999999 9999999999999988 8999999999876643
Q ss_pred ccc-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 176 SHA-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDS-VAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 176 ~~~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
... .....++..|+|||...+. ++.++|+||||+++++|++|..||..... .......+.....+.......++.++
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence 322 2234678899999976544 88899999999999999999999975332 22333333333333334455788999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+||+ ||++|||+.+|++
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHH
Confidence 99999998 9999999998875
No 257
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.5e-40 Score=281.59 Aligned_cols=252 Identities=29% Similarity=0.402 Sum_probs=199.4
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC---CCCceEEeeeeEEeCCC---C
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL---KNKYIIVCYSVWLDDQH---N 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~---~ 93 (289)
++.++||+|++|.||++.++.+++.||+|.++.... .......+.+|+.+++++ +|+|++++++.+..... .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 678999999999999999998899999999986543 222234555677766655 59999999998865432 2
Q ss_pred eeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 94 TLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.+++++|++.+ +|.+++... ..+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~-~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSD-GQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccC-CCEEEeccCcce
Confidence 48999999976 898888764 35899999999999999999999999 9999999999999999 899999999997
Q ss_pred ccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC----------
Q 022956 172 IVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP---------- 240 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 240 (289)
............++..|+|||.+.+. ++.++|+||||+++++|++|..||......+...........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 76544333344578889999976644 8889999999999999999999998755444333332211000
Q ss_pred --------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 --------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 --------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......++.+.+++..||+ ||++||++++++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00011235678899999998 99999999999999997
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.1e-41 Score=290.73 Aligned_cols=254 Identities=26% Similarity=0.420 Sum_probs=200.5
Q ss_pred eeeeccc--CcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 22 SDLLGSG--AVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 22 ~~~lg~g--~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++... ...++|+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~v~ 78 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC--TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWVIS 78 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEEEE
Confidence 3567777 889999999999999999999976543 344567899999999999999999999988554 5789999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+.+++|.+++.+. ..+++..+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++++||+.+.......
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~-~~~~~~~~~~~~~~~~~~ 155 (328)
T cd08226 79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGD-GLVSLSGLSHLYSLVRNG 155 (328)
T ss_pred ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCC-CcEEEechHHHhhhhccC
Confidence 999999999998864 35899999999999999999999999 9999999999999988 899999997653321111
Q ss_pred c--------cccCCCCCCCCCCcccccC---CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC------
Q 022956 178 A--------AHSIIGTPEYMAPELYEED---YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP------ 240 (289)
Q Consensus 178 ~--------~~~~~~~~~~~aPE~~~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------ 240 (289)
. .....++..|+|||.+.+. +++++|+|||||++++|++|..||............+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 156 QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccc
Confidence 0 0111245679999977543 6889999999999999999999998765444443333221100
Q ss_pred --------------------------------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 241 --------------------------------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 241 --------------------------------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.......++.+.+|+.+||. ||++|||++++++||||+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00011235678999999998 999999999999999998874
Q ss_pred C
Q 022956 282 D 282 (289)
Q Consensus 282 ~ 282 (289)
.
T Consensus 316 ~ 316 (328)
T cd08226 316 E 316 (328)
T ss_pred H
Confidence 3
No 259
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.5e-41 Score=284.42 Aligned_cols=256 Identities=27% Similarity=0.492 Sum_probs=203.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.++||+|++|.||+|.+..++..||+|.++.... ......+..|+..+..+ .|+|++++++.+... ...+++
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v 92 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITD--SDVFIC 92 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecC--CeEEEE
Confidence 678999999999999999998899999999975432 22345556676666566 599999999988554 579999
Q ss_pred eccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+.+ ++.+++.. ...+++..+..++.|++.|+.|||+ .| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 93 ~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~-~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDAS-GNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCC-CCEEECccccchhccCC
Confidence 999865 77777765 4578999999999999999999997 58 9999999999999988 89999999998766543
Q ss_pred cccccCCCCCCCCCCcccccC-----CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC-CCCCCCChH
Q 022956 177 HAAHSIIGTPEYMAPELYEED-----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ-ALNKVKDPE 250 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~-----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 250 (289)
.......++..|+|||.+.+. ++.++|+||||+++++|++|..||............+.....+. ......+++
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPD 248 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 333334567889999976533 68899999999999999999999976444333333333322221 122246789
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
+.+|+.+||. ||++||++++++.||||.......
T Consensus 249 l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 283 (296)
T cd06618 249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAE 283 (296)
T ss_pred HHHHHHHHccCChhhCCCHHHHhcChhhhccchhH
Confidence 9999999998 999999999999999999875543
No 260
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.1e-41 Score=287.92 Aligned_cols=253 Identities=26% Similarity=0.443 Sum_probs=198.9
Q ss_pred ceeeeecccCcceEEEEeecC--CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQE--EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
++.++||+|++|.||+|.++. ++..||+|.+..... ......+.+.+|+.+++.++|||++++++.+.......+++
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 678999999999999999988 899999999986431 12233456778999999999999999999987765578999
Q ss_pred EeccccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC----CCCcEEEeccC
Q 022956 98 ITEVCTSGNLRTYRKKH-----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING----NIGQVKIGDLG 168 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~----~~~~~~l~d~g 168 (289)
|+||+++ +|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. + +.++|+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~-~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPER-GVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCcc-ceEEECCCc
Confidence 9999976 677666432 36899999999999999999999999 999999999999988 6 899999999
Q ss_pred CccccCCccc----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH---------HHHHH
Q 022956 169 FAAIVGRSHA----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVA---------KIYKK 233 (289)
Q Consensus 169 ~~~~~~~~~~----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---------~~~~~ 233 (289)
++........ .....++..|+|||.+.+ .++.++|+||||+++++|++|..||.+..... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9886643322 223456788999996554 37889999999999999999999997543221 00000
Q ss_pred Hh-----------------------CCCCCCCCC-----------CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 234 VT-----------------------GGVKPQALN-----------KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 234 ~~-----------------------~~~~~~~~~-----------~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+. ......... ...+..+.+++.+||. ||++|||+.+++.||||
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 00 000000000 1456788999999999 99999999999999998
No 261
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.9e-41 Score=312.04 Aligned_cols=252 Identities=28% Similarity=0.415 Sum_probs=199.5
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||.||+|.+..+|+.||+|++.... ...+...+++.+|+++++.++|||++++++.+.+. +..
T Consensus 2 grY-eIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l-~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~--~~l 77 (932)
T PRK13184 2 QRY-DIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL-SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG--DPV 77 (932)
T ss_pred CCe-EEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc-ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC--CEE
Confidence 466 68999999999999999999999999999997533 23455567899999999999999999999887543 678
Q ss_pred EEEeccccCCcHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 96 NFITEVCTSGNLRTYRKKH-----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-----------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
+++|||++|++|.+++... ..++...+..++.|++.||.|||++| ++|+||||+||+++.+ +.++|
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~d-g~vKL 154 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLF-GEVVI 154 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCC-CCEEE
Confidence 9999999999999988641 23566788999999999999999999 9999999999999988 89999
Q ss_pred eccCCccccCCcc-------------------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCC
Q 022956 165 GDLGFAAIVGRSH-------------------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSEC 224 (289)
Q Consensus 165 ~d~g~~~~~~~~~-------------------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~ 224 (289)
+|||++....... ......|++.|+|||...+. ++.++|||||||++++|+||..||...
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 9999997652110 01124589999999976654 899999999999999999999999764
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 225 DSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
.......................++.+.+++.+||. ||++|++..+.+.+
T Consensus 235 ~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 235 KGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred chhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 433322221111111111223467899999999998 99999876555543
No 262
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.4e-40 Score=282.46 Aligned_cols=258 Identities=26% Similarity=0.457 Sum_probs=210.5
Q ss_pred eCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 12 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 12 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
.+++..| ...++||+|+||+||+|++..+|..+++|.+...... .......+.+|+++++.++|||++++++.+.+.
T Consensus 17 ~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 93 (313)
T cd06633 17 DDPEEIF-VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE- 93 (313)
T ss_pred CCHHHHh-hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-
Confidence 3444555 3468899999999999999999999999999765332 334456788899999999999999999988654
Q ss_pred CCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
...++|+||+.+ ++.+++.. ..++++.++..++.|++.++.|||+.| ++|+||+|+||+++.+ +.++|+|||++
T Consensus 94 -~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~-~~~kL~dfg~~ 168 (313)
T cd06633 94 -HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFGSA 168 (313)
T ss_pred -CEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCC-CCEEEeecCCC
Confidence 578999999976 77777754 457899999999999999999999999 9999999999999988 89999999988
Q ss_pred cccCCccccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCC
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
..... .....++..|+|||.+. +.++.++|+||||+++++|++|..||................ .+......
T Consensus 169 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~ 244 (313)
T cd06633 169 SKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SPTLQSNE 244 (313)
T ss_pred cccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCCCccc
Confidence 64322 22345778899999763 347889999999999999999999998765555554443332 33333444
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.+..+++++.+||+ +|.+||++.+++.||||....
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 57789999999998 999999999999999998754
No 263
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-40 Score=282.51 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=203.4
Q ss_pred cceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.+.||+|+||+||++.+ ..++..+|+|.+... .......+.+|+.++++++|||++++++.+.. .+
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 80 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVE--GD 80 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CC
Confidence 46889999999999999975 335667999988643 34456778999999999999999999998754 36
Q ss_pred eeEEEeccccCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 94 TLNFITEVCTSGNLRTYRKKHR-------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~-------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
.+++++||+++++|.+++.... .+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~-~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGEN-L 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccC-C
Confidence 7899999999999999987533 4899999999999999999999999 9999999999999988 8
Q ss_pred cEEEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHh
Q 022956 161 QVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVT 235 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~ 235 (289)
.++|+|||++........ .....++..|+|||.+.+. ++.++|+||||+++++|++ |..||....... ....+.
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i~ 236 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECIT 236 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Confidence 999999999875533221 1122346789999977644 8999999999999999998 899997755444 333344
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 236 GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.+... ..+...++++.+++.+||+ ||.+|||+.++++ .++++...
T Consensus 237 ~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~--~l~~~~~~ 282 (288)
T cd05093 237 QGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS--LLQNLAKA 282 (288)
T ss_pred cCCcC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH--HHHHHHHh
Confidence 43322 2334568899999999998 9999999999987 67666543
No 264
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-40 Score=281.56 Aligned_cols=252 Identities=25% Similarity=0.411 Sum_probs=201.3
Q ss_pred CCcccceeeeecccCcceEEEEee----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFD----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
+++++++.++||+|+||.||++.. +.++..||+|.++... .......+.+|+++++.++|||++++.+.+...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 2 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred chhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 578889999999999999999973 5678999999986442 344467799999999999999999999987665
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
+....++|+||++|++|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~-~~~~l~dfg~ 155 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGL 155 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCC-CCEEECCCcc
Confidence 456789999999999999999764 46899999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccc----cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCC--------------CcHHHH
Q 022956 170 AAIVGRSHA----AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSEC--------------DSVAKI 230 (289)
Q Consensus 170 ~~~~~~~~~----~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~--------------~~~~~~ 230 (289)
+........ .....++..|+|||.+.+ .+++++|+||||+++++|+++..|.... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 976643322 123345667999996654 4889999999999999999976654321 111112
Q ss_pred HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 231 YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
...+...... ......+..+.+|+.+||+ ||++||++.++++
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 236 VRVLEEGKRL-PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHHHcCccC-CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 2222222221 2234468899999999998 9999999999998
No 265
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.2e-40 Score=284.46 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=200.7
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC-------
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ------- 91 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------- 91 (289)
|++.++||+|++|.||+|.++.+|+.||+|.++..... ......+.+|++++++++|||++++++.+....
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 36789999999999999999999999999999865432 222356778999999999999999998875432
Q ss_pred -CCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 -HNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 -~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...+++++||+++ ++.+.+... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~ 162 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNK-GQIKLADFGL 162 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CcEEeCcccc
Confidence 2478999999987 677766653 46899999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccc--cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh--CCCCCC--
Q 022956 170 AAIVGRSHA--AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--GGVKPQ-- 241 (289)
Q Consensus 170 ~~~~~~~~~--~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~-- 241 (289)
+........ .....++..|+|||.+.+ ..++++|+||||+++++|++|..||.............. +...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 976643321 122345678999996653 378899999999999999999999986544333322111 111110
Q ss_pred -----------------------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 242 -----------------------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 242 -----------------------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
......+..+.+++..||+ ||++||++++++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0112357899999999998 99999999999999997
No 266
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.4e-41 Score=286.71 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=199.3
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC---
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ--- 91 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 91 (289)
.++| ++.++||+|++|.||+|.++.+++.+|+|.+...... ......+.+|+++++.++||||+++++.+....
T Consensus 7 ~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 7 LRDY-EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS 83 (311)
T ss_pred cccE-EEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence 3566 6899999999999999999999999999999765432 112345677999999999999999998775432
Q ss_pred ---CCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 92 ---HNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 92 ---~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
...++++++|+.+ +|...+.. ...+++.++..++.|+++||.|||+.| ++|+||+|+||+++.+ +.++|+||
T Consensus 84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~df 159 (311)
T cd07866 84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQ-GILKIADF 159 (311)
T ss_pred cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECcC
Confidence 2367999999976 67666654 457999999999999999999999999 9999999999999998 89999999
Q ss_pred CCccccCCcccc------------ccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 022956 168 GFAAIVGRSHAA------------HSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK 233 (289)
Q Consensus 168 g~~~~~~~~~~~------------~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~ 233 (289)
|++......... ....+++.|+|||...+ .++.++|+||||+++++|++|..||.+..........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999765432211 11235678999997643 3788999999999999999999999865544333322
Q ss_pred HhCCCC--CC------------------C-------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 234 VTGGVK--PQ------------------A-------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 234 ~~~~~~--~~------------------~-------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
...... +. . .....++.+.+++.+||+ ||++|||+.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 211000 00 0 001234678899999998 99999999999999998
No 267
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.4e-40 Score=285.86 Aligned_cols=264 Identities=30% Similarity=0.428 Sum_probs=207.8
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
...++| ++.+.||.|+||.||+|.++.+|+.+|+|.+..... .....+.+.+|+++++.++|||++++.+++....
T Consensus 7 ~~~~~y-~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 82 (328)
T cd07856 7 EITNRY-VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISPL- 82 (328)
T ss_pred ccccce-EEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC-
Confidence 345565 689999999999999999999999999999865432 2233566778999999999999999999875433
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
...++++||+. ++|..++.. ..+++..+..++.|+++||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+..
T Consensus 83 ~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~-~~~~l~dfg~~~~ 157 (328)
T cd07856 83 EDIYFVTELLG-TDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINEN-CDLKICDFGLARI 157 (328)
T ss_pred CcEEEEeehhc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCC-CCEEeCccccccc
Confidence 56889999985 589888875 45888899999999999999999999 9999999999999988 8999999999875
Q ss_pred cCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---------------
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVT--------------- 235 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--------------- 235 (289)
.... .....++..|+|||.+.+ .+++++|+||||+++++|++|..||..............
T Consensus 158 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 158 QDPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cCCC--cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 4332 223456788999997654 488999999999999999999999976543221111000
Q ss_pred --------CCC-----CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 236 --------GGV-----KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 236 --------~~~-----~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
... +........++.+++++++||+ +|++||++++++.||||..+...-.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcccc
Confidence 000 0001112357889999999998 999999999999999998887665443
No 268
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.1e-40 Score=286.79 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=206.9
Q ss_pred cceeeeecccCcceEEEEeecCC--CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEe--CCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE--GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLD--DQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~--~~~~ 93 (289)
|++.+.||+|+||.||++.+..+ +..||+|.+..... .....+.+.+|+.+++++ +||||+++++.... ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 36789999999999999999888 99999999874322 233456678899999999 59999999886432 2224
Q ss_pred eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 94 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
.++++++++.+ +|.+++.....+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 80 ~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~-~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNAD-CELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCC-CCEEeCcCCCceec
Confidence 67889999864 89999988888999999999999999999999999 9999999999999998 89999999999765
Q ss_pred CCccc-----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC---------
Q 022956 174 GRSHA-----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--------- 237 (289)
Q Consensus 174 ~~~~~-----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--------- 237 (289)
..... .....+++.|+|||...+ .++.++|+||||+++++|++|..||............+...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 43211 123457889999996553 37889999999999999999999997654332222111100
Q ss_pred ----------------CCC---CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCCC
Q 022956 238 ----------------VKP---QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSEP 287 (289)
Q Consensus 238 ----------------~~~---~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~~ 287 (289)
... .......+..+.+++.+||+ ||++|||+.+++.||||..+......+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~ 305 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEP 305 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccc
Confidence 000 01122347789999999998 999999999999999999887665443
No 269
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.7e-40 Score=276.89 Aligned_cols=243 Identities=24% Similarity=0.393 Sum_probs=200.8
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+.+.++||+|++|.||+|.++.+++.+|+|.+... ......+.+|++.++.++|+|++++++.+..+ ..++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYII 80 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcEEE
Confidence 35789999999999999999999999999998643 22356788899999999999999999987443 578999
Q ss_pred eccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++... ..+++..++.++.|++.||.+||++| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGEN-HLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CcEEeCCCccccccccc
Confidence 9999999999998753 45899999999999999999999999 9999999999999988 89999999999766433
Q ss_pred cccc--cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HAAH--SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~~~--~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.... ....+..|+|||...+ .++.++|+||||+++++|++ |..||.+... ......+...... ..+...++.+.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~ 235 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKGYRM-ERPEGCPPKVY 235 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCCC-CCCCCCCHHHH
Confidence 2211 1223567999997654 48889999999999999998 8999987443 4444445544333 23455689999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+||+ ||++||++.++++
T Consensus 236 ~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 236 ELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHccCCcccCCCHHHHHH
Confidence 99999998 9999999999987
No 270
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.9e-40 Score=275.71 Aligned_cols=244 Identities=24% Similarity=0.399 Sum_probs=198.9
Q ss_pred eeecccCcceEEEEeecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEEG---IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++||+|+||.||+|....++ ..+|+|.+..... ....+.+.+|+++++.+.|+|++++++.+. .+.+++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI---AAGKKEFLREASVMAQLDHPCIVRLIGVCK---GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEc---CCceEEEE
Confidence 47999999999999866554 7899999976543 234567889999999999999999998763 24689999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
||+.+++|.+++.....+++..+..++.|++.++.+||..+ ++|+||+|+||+++.+ +.++|+|||.+.........
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~-~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 75 ELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNR-HQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred EeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCC-CcEEeccccccceeecCCcc
Confidence 99999999999998778999999999999999999999999 9999999999999998 89999999998765433221
Q ss_pred c----cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 180 H----SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 180 ~----~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
. ...++..|+|||...+. ++.++|+||||+++++|++ |..||...... .....+.+.... ..+...+..+++
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~ 229 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAMLESGERL-PRPEECPQEIYS 229 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHcCCcC-CCCCCCCHHHHH
Confidence 1 11224579999976544 8899999999999999998 99999875543 344444444332 334556889999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 254 FIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
++.+||+ +|++||++.++++ .|.+
T Consensus 230 li~~cl~~~p~~Rp~~~~l~~--~l~~ 254 (257)
T cd05060 230 IMLSCWKYRPEDRPTFSELES--TFRR 254 (257)
T ss_pred HHHHHhcCChhhCcCHHHHHH--HHHh
Confidence 9999998 9999999999987 5544
No 271
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.9e-40 Score=278.80 Aligned_cols=246 Identities=23% Similarity=0.369 Sum_probs=195.8
Q ss_pred cceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.+.||+|+||.||++.++ .++..+|+|++.... .......+.+|+.+++.++|||++++++.+. .+.
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~~ 82 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVS--QGQ 82 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCC
Confidence 478999999999999999764 245779999986432 2334566889999999999999999998873 346
Q ss_pred eeEEEeccccCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 94 TLNFITEVCTSGNLRTYRKKH----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
..++|+||+++++|.+++.+. ..++...+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~-~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAED-FTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCC-CCEE
Confidence 789999999999999998752 23567889999999999999999999 9999999999999988 8999
Q ss_pred EeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCC
Q 022956 164 IGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 164 l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~ 238 (289)
|+|||++........ .....+++.|+|||.+.+ .+++++|+||||+++++|++ |..||.+...............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 999999875532211 112234678999997664 48999999999999999999 7899987554433333333222
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
...+...++.+++++.+||+ ||++||++.+++++
T Consensus 240 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 --LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22345568899999999998 99999999999873
No 272
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2e-40 Score=292.56 Aligned_cols=245 Identities=27% Similarity=0.393 Sum_probs=197.7
Q ss_pred ceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 93 (289)
++.++||+|+||.||+|.+... +..||+|+++... .....+.+.+|+++++++. ||||+++++.+.. ..
T Consensus 40 ~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~--~~ 114 (400)
T cd05105 40 VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA---RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK--SG 114 (400)
T ss_pred ehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--CC
Confidence 5679999999999999986433 4579999997542 3344567899999999996 9999999998844 36
Q ss_pred eeEEEeccccCCcHHHHHHhc-----------------------------------------------------------
Q 022956 94 TLNFITEVCTSGNLRTYRKKH----------------------------------------------------------- 114 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~----------------------------------------------------------- 114 (289)
.+++||||+++++|.+++.+.
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 799999999999999887542
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 115 -------------------------------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 115 -------------------------------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~~ 272 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEeC
Confidence 23677888999999999999999999 999999999999999
Q ss_pred CCCcEEEeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 022956 158 NIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYK 232 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~ 232 (289)
+ +.++|+|||++........ .....+++.|+|||.+.+ .+++++||||||+++|+|++ |..||...........
T Consensus 273 ~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~ 351 (400)
T cd05105 273 G-KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN 351 (400)
T ss_pred C-CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence 8 8999999999876533221 222345678999997654 48999999999999999997 9999987555455555
Q ss_pred HHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 233 KVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.....+. .+...+..+.+++.+||+ ||++||++.++.+
T Consensus 352 ~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 352 KIKSGYRMA-KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHhcCCCCC-CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 555543332 334568899999999998 9999999999887
No 273
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.3e-40 Score=276.74 Aligned_cols=245 Identities=21% Similarity=0.330 Sum_probs=199.5
Q ss_pred cceeeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+++.+.||+|+||+||+|.++.+ ...+|+|.++... .......+.+|+..++.++|||++++++.+.. ++..
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 80 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRPV 80 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCce
Confidence 36789999999999999988644 4679999887543 34446678889999999999999999998744 3678
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++++||+++++|.+++... ..+++..+..++.|++.|+.+||+++ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~-~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCC-CCEEECccchhhccc
Confidence 9999999999999998763 57899999999999999999999999 9999999999999988 899999999998764
Q ss_pred Cccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 175 RSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 175 ~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
.... .....++..|+|||...+ .+++++|+||||+++++|++ |..||........ ...+....... .+...++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ 235 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV-IKAVEDGYRLP-PPMDCPS 235 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH-HHHHHcCCCCC-CCCCCCH
Confidence 2111 112234568999997764 48999999999999999998 9999976554433 33333332221 2345688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.+++..||+ +|++||+++++++
T Consensus 236 ~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 236 ALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999998 9999999999987
No 274
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.5e-41 Score=282.20 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=204.1
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|.||++.++.+|+.+++|.+..... .+.....+.+|+++++.++|++++++++.+... ..+++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 77 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE--SEGIPKTALREIKLLKELNHPNIIKLLDVFRHK--GDLYLVF 77 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--CCEEEEE
Confidence 567899999999999999999999999999876543 234456788899999999999999999987544 6789999
Q ss_pred ccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 100 EVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
||+++ +|.+++.. ...+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 78 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 78 EFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTE-GVLKLADFGLARSFGSPVR 153 (283)
T ss_pred eccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCC-CcEEEeeeeeeEecCCCcc
Confidence 99987 78777765 467999999999999999999999999 9999999999999988 899999999987665443
Q ss_pred ccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---------------
Q 022956 178 AAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--------------- 240 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------------- 240 (289)
......++..|+|||.+.+ .++.++|+||||+++++|++|+.||......+...........+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 2223456778999996653 48889999999999999999999998766544433332221110
Q ss_pred ------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 ------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 ------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......+..+++++.+||+ ||.+||++.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00112347789999999998 99999999999999997
No 275
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.2e-40 Score=279.73 Aligned_cols=245 Identities=22% Similarity=0.334 Sum_probs=200.1
Q ss_pred cceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+.+.+.||+|+||.||+|.+. .++..+|+|.++... ..+..+.+.+|+++++.++|+|++++++.+... .
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 81 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA---SNDARKDFEREAELLTNFQHENIVKFYGVCTEG--D 81 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC---CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--C
Confidence 467899999999999999864 346889999987542 233467889999999999999999999988554 6
Q ss_pred eeEEEeccccCCcHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC
Q 022956 94 TLNFITEVCTSGNLRTYRKKH--------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI 159 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~--------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~ 159 (289)
..+++|||+++++|.+++... ..+++.++..++.|++.|+.+||++| ++|+||+|+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~- 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYD- 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCC-
Confidence 799999999999999998753 34788899999999999999999999 9999999999999998
Q ss_pred CcEEEeccCCccccCCcc---ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 022956 160 GQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKV 234 (289)
Q Consensus 160 ~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~ 234 (289)
+.++|+|||++....... ......+++.|+|||.+.+. +++++||||||+++++|++ |..||....... ....+
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-~~~~~ 237 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-VIECI 237 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH
Confidence 899999999987543221 11223346789999976644 8999999999999999998 999997655443 33444
Q ss_pred hCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 235 TGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+... ......+..+.+++.+||+ ||++||++.++++
T Consensus 238 ~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 238 TQGRLL-QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 443332 2344578999999999998 9999999999987
No 276
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.3e-40 Score=278.47 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=198.8
Q ss_pred cceeeeecccCcceEEEEeecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQE-----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.+.||+|++|.||+|.++. ++..+++|.+.... .......+.+|+.+++.++|+|++++++.+... .
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 82 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--L 82 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence 4688999999999999999887 77889999886432 233345688899999999999999999977543 5
Q ss_pred eeEEEeccccCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--CCcEEE
Q 022956 94 TLNFITEVCTSGNLRTYRKKHR-------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--IGQVKI 164 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~-------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~~~~~l 164 (289)
..++++||+.|++|.+++.... .+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+ ...++|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceEe
Confidence 6789999999999999987643 4889999999999999999999999 9999999999999865 136999
Q ss_pred eccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC
Q 022956 165 GDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK 239 (289)
Q Consensus 165 ~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (289)
+|||++........ ......+..|+|||.+. +.++.++|||||||++++|++ |..||...... .....+.....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~ 239 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGR 239 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCc
Confidence 99999976532211 11222346899999765 449999999999999999997 99999875443 33444444333
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
+. .+...+..+.+++.+||+ +|++||++.++++|
T Consensus 240 ~~-~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 LD-PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CC-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 32 344568899999999998 99999999999985
No 277
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-40 Score=282.98 Aligned_cols=245 Identities=25% Similarity=0.392 Sum_probs=195.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEE--EEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEV--AWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~--aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~ 96 (289)
++.+.||+|+||.||+|.++.++..+ ++|.++... .......+.+|+.++.++ +|+|++++++.+.. ++.++
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--~~~~~ 84 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLY 84 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC---CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC--CCCce
Confidence 68899999999999999988777654 666654321 344567788999999999 89999999998744 36799
Q ss_pred EEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 97 FITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
+++||+++++|.+++... ..+++..+..++.|++.|+.|||++| ++|+||+|+||+++.+ +
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~-~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN-Y 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCC-C
Confidence 999999999999998643 25789999999999999999999999 9999999999999988 8
Q ss_pred cEEEeccCCccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCC
Q 022956 161 QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~ 238 (289)
.++|+|||++..............+..|+|||...+. ++.++||||||+++++|+| |..||...... .....+....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~ 240 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGY 240 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCC
Confidence 9999999998643322222222345679999976654 7889999999999999998 99999764443 3333343332
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
.+. .+...++.+.+|+.+||+ +|++||++++++.+
T Consensus 241 ~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 RLE-KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 222 233467899999999998 99999999999974
No 278
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=295.42 Aligned_cols=251 Identities=24% Similarity=0.389 Sum_probs=209.2
Q ss_pred eeeeecccCcceEEEEeecCCCc---E-EEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGI---E-VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~---~-~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+.++||+|+||.||+|..+..+. . ||+|..+... ....+.+.++.+|++++++++||||++++|+...+ ..++
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~--~Pl~ 237 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE--EPLM 237 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--CccE
Confidence 45899999999999998765422 3 8999988522 12467789999999999999999999999988665 5799
Q ss_pred EEeccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 97 FITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+|||+|.||+|.+++.+.+ .++..+...++.+.+.||+|||+++ ++||||-.+|+|++.+ +.+|++|||++.....
T Consensus 238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~-~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKK-GVVKISDFGLSRAGSQ 314 (474)
T ss_pred EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCC-CeEEeCccccccCCcc
Confidence 9999999999999999876 5999999999999999999999999 9999999999999998 6889999999886653
Q ss_pred ccccc-cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 176 SHAAH-SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 176 ~~~~~-~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
..... ...-..+|+|||.+... +++++||||+|+++||+++ |..||.+.........++..+.+... +...+..+.
T Consensus 315 ~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~ 393 (474)
T KOG0194|consen 315 YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELA 393 (474)
T ss_pred eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHH
Confidence 32222 12356799999977655 9999999999999999999 88899987766555555455544433 446788999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.++.+|+. ||++||++.++.+ +++.+
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~--~l~~~ 420 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKK--KLEAL 420 (474)
T ss_pred HHHHHhccCChhhccCHHHHHH--HHHHH
Confidence 99999998 9999999999988 55544
No 279
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-41 Score=305.75 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=211.2
Q ss_pred ceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++.+.||+|+||.||+|.-. ++...||||.++... +...+.+|++|++++..++|||||+++|++... +.
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--~P 563 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREG--DP 563 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--Ce
Confidence 46789999999999999632 334669999998653 455788999999999999999999999999554 68
Q ss_pred eEEEeccccCCcHHHHHHhc----------C----CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 95 LNFITEVCTSGNLRTYRKKH----------R----HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~----------~----~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
+++|+||+..|+|.+++..+ . +|+..+.+.|+.||+.|+.||-++. ++|+||-..|.||.++ -
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge~-l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGEN-L 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceeccc-e
Confidence 99999999999999998632 2 3889999999999999999999999 9999999999999999 7
Q ss_pred cEEEeccCCccccCCc--cc-cccCCCCCCCCCCc-ccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHh
Q 022956 161 QVKIGDLGFAAIVGRS--HA-AHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVT 235 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~--~~-~~~~~~~~~~~aPE-~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~ 235 (289)
.|||+|||+++..... .+ .....-..+||||| ++.++++..+||||+|+++||+++ |..||.+..+.+.+.- +.
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~-i~ 719 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC-IR 719 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHH-HH
Confidence 9999999999876432 22 22344567999999 788899999999999999999999 9999998766655544 44
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 236 GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
.+.. -..+..+|.++..|+..||+ +|++||++.||=. -++.+..+++
T Consensus 720 ~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~--~L~~~~~~s~ 767 (774)
T KOG1026|consen 720 AGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS--RLQAWAQASP 767 (774)
T ss_pred cCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH--HHHHHHhcCc
Confidence 4444 34567789999999999998 9999999999965 5555544443
No 280
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.9e-40 Score=277.06 Aligned_cols=247 Identities=19% Similarity=0.355 Sum_probs=199.3
Q ss_pred ceeeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC----
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH---- 92 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---- 92 (289)
++.+.||+|+||.||+|.+..+ +..+|+|.++.... .......+.+|++.++.++|||++++++.+...+.
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5789999999999999987654 47899999875432 34456778999999999999999999987754332
Q ss_pred CeeEEEeccccCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
...++++||+++++|..++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLRED-MTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCC-CeEEECC
Confidence 3578999999999999888532 36899999999999999999999999 9999999999999988 8999999
Q ss_pred cCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 167 LGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 167 ~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
||++........ ......+..|+|||.+.+. ++.++|+|||||++++|++ |..||.+..... ....+..+....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~ 235 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-IYDYLRHGNRLK 235 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCC
Confidence 999876543221 1122345689999977644 8899999999999999999 889997755443 334444433322
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+...++.+.+++.+||+ ||++||++.++++
T Consensus 236 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 236 -QPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred -CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 345578899999999999 9999999999987
No 281
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.9e-40 Score=281.56 Aligned_cols=245 Identities=24% Similarity=0.380 Sum_probs=195.5
Q ss_pred ceeeeecccCcceEEEEeecCCCc--EEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGI--EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~ 96 (289)
++.+.||+|+||.||+|.++.++. .+++|.++... .....+.+.+|+.+++++ +|||++++++.+... ..++
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~~ 79 (297)
T cd05089 5 KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENR--GYLY 79 (297)
T ss_pred eeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC--Ccce
Confidence 689999999999999999887765 46888776321 233456788999999999 799999999887443 5789
Q ss_pred EEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 97 FITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
+++||+++++|.+++... ..+++..+..++.|++.||.+||++| ++|+||+|+||+++.+ +
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGEN-L 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCC-C
Confidence 999999999999998653 24788999999999999999999999 9999999999999988 8
Q ss_pred cEEEeccCCccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCC
Q 022956 161 QVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~ 238 (289)
.++|+|||++..............+..|+|||...+. ++.++||||||+++++|++ |..||........ ...+....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-~~~~~~~~ 235 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGY 235 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhcCC
Confidence 9999999998644322222222334579999976544 8899999999999999998 9999987554433 33333332
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
.. ..+...++.+++|+.+||+ +|.+||+++++++.
T Consensus 236 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 RM-EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22 2344578899999999998 99999999999764
No 282
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.3e-40 Score=278.55 Aligned_cols=246 Identities=22% Similarity=0.356 Sum_probs=198.6
Q ss_pred cceeeeecccCcceEEEEee----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 19 GRYSDLLGSGAVKKVYRAFD----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
+++.+.||+|+||+||+|.+ ..++..+++|.++... .......+.+|+.++++++|||++++++.+... ..
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 81 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN---NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QP 81 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cc
Confidence 36789999999999999985 3456889999997532 344456788999999999999999999987544 57
Q ss_pred eEEEeccccCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 95 LNFITEVCTSGNLRTYRKKH-----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~-----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
.+++|||+++++|.+++... ..+++.++..++.|++.||.|||++| ++|+||+|+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 89999999999999998532 24788899999999999999999999 999999999999998
Q ss_pred CCCcEEEeccCCccccCCcc---ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 022956 158 NIGQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYK 232 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~ 232 (289)
+ +.++|+|||++....... ......++..|+|||.+. +.+++++|+||||+++++|++ |..||.+... ....+
T Consensus 160 ~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~ 237 (283)
T cd05090 160 Q-LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIE 237 (283)
T ss_pred C-CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHH
Confidence 8 899999999997653321 122233456799999765 448999999999999999998 8899976543 33344
Q ss_pred HHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 233 KVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
.+...... ..+...++.+++++.+||+ ||.+||++.+|+++
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 238 MVRKRQLL-PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHcCCcC-CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 44443322 2345568999999999998 99999999999873
No 283
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.9e-40 Score=275.49 Aligned_cols=247 Identities=23% Similarity=0.402 Sum_probs=199.7
Q ss_pred ccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 18 FGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 18 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
.+++.++||+|++|.||+|.+. ++..+|+|.+.... ...+.+.+|+.+++.++|+|++++++.+.. .+..++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 78 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEPIYI 78 (261)
T ss_pred HeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCCcEE
Confidence 3478999999999999999864 56789999886432 225678889999999999999999987743 367899
Q ss_pred EeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 98 ITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++||+++++|.+++.. ...++...+..++.|++.||+|||+.+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSES-LMCKIADFGLARVIED 155 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCC-CcEEECCCccceecCC
Confidence 9999999999999865 356889999999999999999999999 9999999999999988 8999999999976643
Q ss_pred ccc--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 176 SHA--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 176 ~~~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
... .....++..|+|||...+ .+++++|+||||+++|+|++ |..||....... ....+........ ....+.++
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 233 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSALQRGYRMPR-MENCPDEL 233 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHHHcCCCCCC-CCCCCHHH
Confidence 221 112234568999997654 48889999999999999998 999998754433 3444444433322 23468899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
.+++.+||+ +|++||+++++.+ +|++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~--~l~~ 260 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQS--VLDD 260 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHH--HHhc
Confidence 999999998 9999999999987 5543
No 284
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.7e-40 Score=279.63 Aligned_cols=249 Identities=29% Similarity=0.454 Sum_probs=201.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 98 (289)
++.+.||+|++|+||+|....+++.+++|.+...... .......+|+..+++++ |+|++++++.+.. +...++|
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv 76 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFV 76 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEE
Confidence 5789999999999999999889999999998754321 11233456888999998 9999999998855 4678999
Q ss_pred eccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|||+ +++|.+++.... .+++.++..++.|++.+|.+||++| ++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~-~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGP-EVVKIADFGLAREIRSR 152 (283)
T ss_pred EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCC-CCEEEeecccceeccCC
Confidence 9999 668988887654 7899999999999999999999999 9999999999999998 89999999999876554
Q ss_pred cccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--------------
Q 022956 177 HAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-------------- 240 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 240 (289)
.......++..|+|||.+.+ .++.++|+||||+++++|++|+.||......+...........+
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 44444567888999997643 37889999999999999999999997765544433322110000
Q ss_pred -------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 241 -------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 241 -------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.......+..+.+++.+||+ ||++||+++|++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00011225789999999998 99999999999999997
No 285
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.7e-40 Score=285.03 Aligned_cols=248 Identities=24% Similarity=0.431 Sum_probs=195.6
Q ss_pred CcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHH
Q 022956 29 AVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR 108 (289)
Q Consensus 29 ~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~ 108 (289)
+++.||.+.++.+++.||+|++..... .....+.+.+|++.+++++|+||+++++.+... +..++++||+++++|.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVSPLMAYGSCE 87 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEEeccCCCCHH
Confidence 445566666677899999999986532 344567899999999999999999999988554 5789999999999999
Q ss_pred HHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc--------
Q 022956 109 TYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-------- 178 (289)
Q Consensus 109 ~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~-------- 178 (289)
+++... ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++++|||.+........
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGD-GKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecC-CceEEecCccceeeccccccccccccc
Confidence 999753 46899999999999999999999999 9999999999999988 8999999998865432111
Q ss_pred cccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC---------------
Q 022956 179 AHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP--------------- 240 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------------- 240 (289)
.....++..|+|||.+.+ .++.++|+||+|+++++|++|..||..........+.+.+....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcC
Confidence 122345678999997754 37889999999999999999999998755444443333221110
Q ss_pred ----------------CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 241 ----------------QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 241 ----------------~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
.......+..+.+++..||+ ||++|||++++|+||||+....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 00011123578899999998 99999999999999999988643
No 286
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.6e-40 Score=276.62 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=198.2
Q ss_pred ceeeeecccCcceEEEEeecCCCc--EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC----CC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGI--EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ----HN 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~ 93 (289)
.++++||+|+||.||+|.+..++. .+|+|.++.... .....+.+.+|+.+++.++|+|++++++.+.... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 367899999999999999877765 699999876432 3455678889999999999999999998764321 23
Q ss_pred eeEEEeccccCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 94 TLNFITEVCTSGNLRTYRKK------HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
..++++||+.+++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNEN-MNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCC-CCEEECCC
Confidence 56889999999999988742 234789999999999999999999999 9999999999999988 89999999
Q ss_pred CCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCC
Q 022956 168 GFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQA 242 (289)
Q Consensus 168 g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (289)
|++........ ......++.|++||...+. +++++|+||||+++|+|++ |..||.+.... .....+..+....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~- 234 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYDYLRQGNRLK- 234 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCC-
Confidence 99986543221 1223456789999977654 8999999999999999999 88999775443 3444444433322
Q ss_pred CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 243 LNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
.....+..+.+++.+||+ ||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 233467889999999998 99999999999873
No 287
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.2e-40 Score=287.79 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=199.8
Q ss_pred CCCcccceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeE
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVW 87 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 87 (289)
+.++| ++.+.||+|+||.||+|.+ ..+++.||+|.++... .......+.+|+.++.++ +|||++++++.+
T Consensus 5 ~~~~~-~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (343)
T cd05103 5 PRDRL-KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGAC 80 (343)
T ss_pred chhHh-cccccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence 34565 7899999999999999974 3567899999997543 233456788899999999 679999999877
Q ss_pred EeCCCCeeEEEeccccCCcHHHHHHhc-----------------------------------------------------
Q 022956 88 LDDQHNTLNFITEVCTSGNLRTYRKKH----------------------------------------------------- 114 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~~~sL~~~~~~~----------------------------------------------------- 114 (289)
... +..+++++||+++++|.+++...
T Consensus 81 ~~~-~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 81 TKP-GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred ecC-CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 554 35788999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc--
Q 022956 115 --------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-- 178 (289)
Q Consensus 115 --------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~-- 178 (289)
..++...+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~ 236 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYV 236 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCC-CcEEEEecccccccccCcchh
Confidence 23677888999999999999999999 9999999999999988 8999999999876532211
Q ss_pred -cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHH
Q 022956 179 -AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFI 255 (289)
Q Consensus 179 -~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 255 (289)
.....++..|+|||.+.+ .++.++|+||||+++++|++ |..||............+..+.... .+...++.+.+++
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 315 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-APDYTTPEMYQTM 315 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC-CCCCCCHHHHHHH
Confidence 112234567999996654 48999999999999999997 9999987554444444444333322 2344678999999
Q ss_pred HHHHc-CCCCCCCHHHHhcC
Q 022956 256 EKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h 274 (289)
..||+ ||++||++.+|++|
T Consensus 316 ~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 316 LDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHccCChhhCcCHHHHHHH
Confidence 99998 99999999999985
No 288
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-42 Score=316.33 Aligned_cols=258 Identities=20% Similarity=0.364 Sum_probs=216.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.++||.|+||.|..++++.|++.||+|++....... .....-|..|-.++.--+.+=|+.++..|.+ .+++|+||
T Consensus 78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlK-r~~tA~F~EERDimv~~ns~Wiv~LhyAFQD--~~~LYlVM 154 (1317)
T KOG0612|consen 78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLK-RAETACFREERDIMVFGNSEWIVQLHYAFQD--ERYLYLVM 154 (1317)
T ss_pred HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhh-chhHHHHHHHhHHHHcCCcHHHHHHHHHhcC--ccceEEEE
Confidence 57899999999999999999999999999998643321 2224568889999988888889999888744 47899999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA- 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~- 178 (289)
||++||.|..++.+..+++++.+..++..|+.||..||+.| ++||||||+|||+|.. |+++|+|||.+......+.
T Consensus 155 dY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~-GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKS-GHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred ecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEeccc-CcEeeccchhHHhcCCCCcE
Confidence 99999999999999889999999999999999999999999 9999999999999999 9999999999987764433
Q ss_pred -cccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC--CCCCh
Q 022956 179 -AHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN--KVKDP 249 (289)
Q Consensus 179 -~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 249 (289)
....+|||.|.+||++. +.|.+..|.||||+++|+|+.|..||-. +.....+..|..-.....++ ..+|+
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KIm~hk~~l~FP~~~~VSe 310 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKIMNHKESLSFPDETDVSE 310 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHHhchhhhcCCCcccccCH
Confidence 44568999999999764 3489999999999999999999999976 44444444333321111111 33799
Q ss_pred HHHHHHHHHHcCCCCCCC---HHHHhcCcccccCCCCC
Q 022956 250 EVKAFIEKCIAQPRARPS---ASELLKDPFFSELNDDD 284 (289)
Q Consensus 250 ~~~~li~~~l~dp~~Rps---~~~il~h~~~~~~~~~~ 284 (289)
.+++||++++.+|+.|.. ++++-.||||.+++|+.
T Consensus 311 eakdLI~~ll~~~e~RLgrngiedik~HpFF~g~~W~~ 348 (1317)
T KOG0612|consen 311 EAKDLIEALLCDREVRLGRNGIEDIKNHPFFEGIDWDN 348 (1317)
T ss_pred HHHHHHHHHhcChhhhcccccHHHHHhCccccCCChhh
Confidence 999999999999999887 99999999999999953
No 289
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.9e-40 Score=273.70 Aligned_cols=242 Identities=24% Similarity=0.397 Sum_probs=196.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|+||.||++.++ ++..+|+|.+..... ....+.+|+.+++.++|||++++++.+.. ...++++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~iv 77 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM-----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQ--QKPLYIV 77 (256)
T ss_pred cEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc-----cHHHHHHHHHHHHHCCCCCceeEEEEEcc--CCCEEEE
Confidence 367899999999999999875 556899998864322 13567889999999999999999988744 3679999
Q ss_pred eccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
|||+++++|.+++.. ...+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++++|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSST-GVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCC-CeEEECCCCCccccCCCc
Confidence 999999999999875 346899999999999999999999999 9999999999999988 899999999987653222
Q ss_pred cc--ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 AA--HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~~--~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
.. ....++..|+|||...+ .++.++|+||||+++++|++ |+.||........ ...+..+... ..+...+..+.+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~-~~~i~~~~~~-~~~~~~~~~~~~ 232 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-VEMISRGFRL-YRPKLASMTVYE 232 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCCC-CCCCCCCHHHHH
Confidence 11 12234568999997764 48889999999999999999 8999977544433 3444443322 234456789999
Q ss_pred HHHHHHc-CCCCCCCHHHHhc
Q 022956 254 FIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~ 273 (289)
++.+||+ +|++||+++++++
T Consensus 233 li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHccCCcccCcCHHHHHH
Confidence 9999998 9999999999986
No 290
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.9e-40 Score=277.37 Aligned_cols=243 Identities=25% Similarity=0.398 Sum_probs=199.9
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
|++.++||+|+||.||+|.++. +..+++|.+.... ......+.+|+.+++.++|+|++++++.+... ..++++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 80 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVG--EPVYII 80 (261)
T ss_pred HHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecC--CCeEEE
Confidence 4678999999999999999876 8999999987543 22355688899999999999999999887443 678999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.+ +..+++.++..++.|++.|+.|||++| ++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~-~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGED-LVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCC-ceEEEccccchhhcCCc
Confidence 999999999999975 356899999999999999999999999 9999999999999998 89999999999766432
Q ss_pred cc-cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 177 HA-AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 177 ~~-~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
.. .....++..|+|||... +.++.++|+||||+++++|++ |..||.......... .+....... .+...++.+.+
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 235 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYD-QITAGYRMP-CPAKCPQEIYK 235 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHH-HHHhCCcCC-CCCCCCHHHHH
Confidence 21 11223456899999665 448889999999999999998 899997755443333 333333222 34566899999
Q ss_pred HHHHHHc-CCCCCCCHHHHhc
Q 022956 254 FIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~ 273 (289)
++.+||+ ||++|||+.++++
T Consensus 236 ~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 236 IMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHcCCCchhCcCHHHHHH
Confidence 9999998 9999999999987
No 291
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.6e-40 Score=273.87 Aligned_cols=239 Identities=22% Similarity=0.387 Sum_probs=196.8
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|+||.||++... |..+|+|.++.. ...+.+.+|+.++++++|++++++++.+... +...+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv 78 (256)
T cd05082 8 LKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 78 (256)
T ss_pred CeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEEE
Confidence 468899999999999999764 889999998632 2246788899999999999999999876543 3568999
Q ss_pred eccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.+.. .+++..+..++.|++.||.+||++| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCC-CcEEecCCccceecccc
Confidence 99999999999987643 4789999999999999999999999 9999999999999988 89999999998755432
Q ss_pred cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 177 HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
. .....+..|+|||...+. ++.++|+|||||++|+|++ |+.||.... .......+.+...+ ......++.+.++
T Consensus 156 ~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l 231 (256)
T cd05082 156 Q--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKM-DAPDGCPPVVYDV 231 (256)
T ss_pred C--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcCCCC-CCCCCCCHHHHHH
Confidence 2 122345689999976654 8889999999999999998 999997643 34444444444332 3345678999999
Q ss_pred HHHHHc-CCCCCCCHHHHhc
Q 022956 255 IEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~ 273 (289)
+.+||+ +|++|||+.++++
T Consensus 232 i~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 232 MKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 999998 9999999999987
No 292
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3e-40 Score=283.94 Aligned_cols=247 Identities=26% Similarity=0.439 Sum_probs=199.8
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcE----EEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIE----VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
..| ++.+.||+|+||.||+|.+..++.. ||+|.++... .....+.+.+|+.+++.++||||+++++.+...
T Consensus 7 ~~f-~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 7 TEF-KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred hhc-eeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 344 6799999999999999988766654 8999986432 344567788999999999999999999987543
Q ss_pred CCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
..+++++|+.+++|.+++.+. ..++...+..++.|++.||.|||+.| ++|+||||+||+++.+ +.++|+|||++
T Consensus 82 --~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~-~~~kl~DfG~a 156 (316)
T cd05108 82 --TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTP-QHVKITDFGLA 156 (316)
T ss_pred --CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCC-CcEEEcccccc
Confidence 467899999999999998864 46889999999999999999999999 9999999999999988 89999999999
Q ss_pred cccCCcccc---ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 171 AIVGRSHAA---HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 171 ~~~~~~~~~---~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
......... .....+..|+|||.+.+ .++.++||||||+++|+|++ |..||.+.... ...+.+....... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~ 234 (316)
T cd05108 157 KLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEKGERLP-QPP 234 (316)
T ss_pred ccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhCCCCCC-CCC
Confidence 876533221 12234568999997654 48999999999999999998 99999864433 3444444433322 234
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
..+..+.+++.+||. ||.+||++.+++.+
T Consensus 235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 235 ICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 467889999999998 99999999999985
No 293
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=288.44 Aligned_cols=263 Identities=24% Similarity=0.366 Sum_probs=221.7
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
...+++.-++||.|+||.||-++-..||+-||+|.+...+... ........+|-.+|.+++.+.||.+-..| ++.+.
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk-r~ge~maLnEk~iL~kV~s~FiVslaYAf--eTkd~ 259 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK-RKGETMALNEKQILEKVSSPFIVSLAYAF--ETKDA 259 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH-hhhhHHhhHHHHHHHHhccCcEEEEeeee--cCCCc
Confidence 3445566799999999999999999999999999987655421 22234467789999999999888887666 45578
Q ss_pred eEEEeccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 95 LNFITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
+|+|+..+.||.|.-++.+.+ .+++..+..++.+|+.||++||+.+ ++.||+||+|||+|+. |+++|+|+|+|..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~-GhvRISDLGLAve 336 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDH-GHVRISDLGLAVE 336 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccC-CCeEeeccceEEe
Confidence 999999999999999998754 7999999999999999999999999 9999999999999999 9999999999999
Q ss_pred cCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC-CCCCCCCCCCCChH
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG-GVKPQALNKVKDPE 250 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 250 (289)
+.....-....||.+|||||++.++ |+...|.|||||++|+|+.|+.||.......+..+.-.. ...+..++...+++
T Consensus 337 i~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~e 416 (591)
T KOG0986|consen 337 IPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEE 416 (591)
T ss_pred cCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHH
Confidence 8887777778999999999988765 999999999999999999999999865433333211111 12445567888999
Q ss_pred HHHHHHHHHc-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 251 VKAFIEKCIA-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
++++.+.+|+ ||++|. .++++-+||||+.++|.
T Consensus 417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 9999999998 999985 45799999999999885
No 294
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.3e-39 Score=280.12 Aligned_cols=258 Identities=27% Similarity=0.458 Sum_probs=210.2
Q ss_pred eCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 12 VDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 12 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
.++...| ...+.||+|+||.||++.+..++..+|+|.+...... ..+....+.+|+++++.++|+|++++++.+...
T Consensus 21 ~~~~~~f-~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~- 97 (317)
T cd06635 21 EDPEKLF-TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE- 97 (317)
T ss_pred CCchhhh-hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-
Confidence 3444554 5688999999999999999999999999998754332 344566788999999999999999999988554
Q ss_pred CCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
...++|+||+.| +|.+.+.. ..++++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++
T Consensus 98 -~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~-~~~kl~dfg~~ 172 (317)
T cd06635 98 -HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFGSA 172 (317)
T ss_pred -CeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCC-CCEEEecCCCc
Confidence 578999999976 77777654 566899999999999999999999999 9999999999999988 89999999988
Q ss_pred cccCCccccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCC
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
...... ....+++.|+|||.+. +.++.++|+||||+++++|++|..||................. +......
T Consensus 173 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 248 (317)
T cd06635 173 SIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PTLQSNE 248 (317)
T ss_pred cccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC-CCCCCcc
Confidence 654322 2345778899999752 3488899999999999999999999977554444444443332 2233445
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.++.+++++.+||+ +|.+||++.++++|+|+....
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 67889999999998 999999999999999986543
No 295
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.8e-40 Score=281.67 Aligned_cols=261 Identities=26% Similarity=0.460 Sum_probs=211.4
Q ss_pred ceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEE
Q 022956 9 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWL 88 (289)
Q Consensus 9 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 88 (289)
+....+..+| ...+.||+|++|.||+|.++.++..+++|.+...... .......+.+|+++++.++|+|++++.+.+.
T Consensus 8 ~~~~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 85 (308)
T cd06634 8 FFKDDPEKLF-SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85 (308)
T ss_pred hhcCCcHHHH-HHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence 3344566666 4588999999999999999999999999998754322 2344567888999999999999999999886
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
.. ...++|+||+.+ ++.+++.. ..++++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+||
T Consensus 86 ~~--~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~kl~df 159 (308)
T cd06634 86 RE--HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEP-GLVKLGDF 159 (308)
T ss_pred cC--CeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCC-CcEEECCc
Confidence 54 578999999975 77776653 456899999999999999999999999 9999999999999988 89999999
Q ss_pred CCccccCCccccccCCCCCCCCCCcccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPELYE----EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
|++...... ....+++.|+|||.+. +..+.++||||||+++++|++|..||.............. ...+...
T Consensus 160 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 235 (308)
T cd06634 160 GSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQ 235 (308)
T ss_pred ccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCcC
Confidence 998765432 2345678999999653 3478899999999999999999999976554444443333 3333333
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
....+..+++++.+||. +|++||++++++.|||+....
T Consensus 236 ~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 44568899999999998 999999999999999998754
No 296
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5e-40 Score=275.18 Aligned_cols=243 Identities=21% Similarity=0.372 Sum_probs=196.2
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||.||+|.+..+ ..+|+|.++.... . .+.+.+|++++++++|+|++++++.+. ....
T Consensus 6 ~~~-~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~--~---~~~~~~E~~~l~~l~~~~i~~~~~~~~---~~~~ 75 (262)
T cd05071 6 ESL-RLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--S---PEAFLQEAQVMKKLRHEKLVQLYAVVS---EEPI 75 (262)
T ss_pred HHe-eEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc--C---HHHHHHHHHHHHhCCCCCcceEEEEEC---CCCc
Confidence 444 7899999999999999988755 4699999975332 1 356788999999999999999988762 2457
Q ss_pred EEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 96 NFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
++||||+++++|.+++... ..+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~-~~~~L~dfg~~~~~ 152 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGEN-LVCKVADFGLARLI 152 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCC-CcEEeccCCceeec
Confidence 8999999999999999753 45889999999999999999999999 9999999999999988 89999999999765
Q ss_pred CCccc--cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 174 GRSHA--AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 174 ~~~~~--~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
..... .....++..|+|||... +.++.++|+||||+++++|++ |..||.+..... ....+....... .....+.
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 230 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGYRMP-CPPECPE 230 (262)
T ss_pred cccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHHHhcCCCCC-CccccCH
Confidence 43322 12233566899999665 458999999999999999999 888997754443 333343332222 2344688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.+++.+|++ ||++||++.++++
T Consensus 231 ~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 231 SLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHH
Confidence 99999999998 9999999999987
No 297
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-39 Score=272.78 Aligned_cols=242 Identities=23% Similarity=0.380 Sum_probs=197.1
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|++|.||+|.+. ++..||+|.++.... ..+.+.+|++++++++|+|++++++.+... +..+++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 79 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--EPIYIV 79 (261)
T ss_pred eeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc-----cHHHHHHHHHHHHHCCCCCccceeEEEecC--CCeeee
Confidence 478999999999999999875 457899999875432 145678899999999999999999876443 578999
Q ss_pred eccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+|++++++|.+++... ..+++..+..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGEN-NICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCC-CCEEECCcceEEEccCC
Confidence 9999999999999764 36899999999999999999999999 9999999999999998 89999999999876532
Q ss_pred ccc--ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HAA--HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~~--~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
... ........|+|||...+ .++.++|+||||+++++|++ |+.||.+.... .....+...... ......+..+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 234 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQVDQGYRM-PCPPGCPKELY 234 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCcCCHHHH
Confidence 211 11222457999997664 48899999999999999999 99999875443 334444444322 22345688999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+||+ +|++||+++++++
T Consensus 235 ~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 235 DIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHhhcCcccCCCHHHHHH
Confidence 99999998 9999999999987
No 298
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.5e-40 Score=272.87 Aligned_cols=243 Identities=22% Similarity=0.389 Sum_probs=196.3
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|++|+||.+.+. .+..+|+|.+..... ..+.+.+|+.++++++|||++++++++.. ...++++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 77 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYIV 77 (256)
T ss_pred eEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEEE
Confidence 367899999999999999765 345699999874432 13567889999999999999999998743 3578999
Q ss_pred eccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
|||+.+++|.+++... ..+++.++..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQ-GCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CCEEECCCccceecCCCc
Confidence 9999999999999763 46899999999999999999999999 9999999999999988 899999999987553322
Q ss_pred c--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 A--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
. .....++..|+|||...+ .++.++|+||||+++|+|++ |..||........... +...... ......++.+.+
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 232 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK-VSQGLRL-YRPHLASEKVYA 232 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HhcCCCC-CCCCCCCHHHHH
Confidence 1 112234567999997764 48889999999999999998 9999986554433333 3333222 233446889999
Q ss_pred HHHHHHc-CCCCCCCHHHHhcC
Q 022956 254 FIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~h 274 (289)
++.+||+ ||++||++.+++.+
T Consensus 233 li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 233 IMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHcCCCcccCCCHHHHHHh
Confidence 9999998 99999999999874
No 299
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.3e-40 Score=278.32 Aligned_cols=253 Identities=25% Similarity=0.367 Sum_probs=202.6
Q ss_pred cceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+.+.+.||+|+||.||++.+. .++..+++|.++.. .....+.+.+|+..+++++|+|++++++.+.. ..
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 80 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGD--GD 80 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--CC
Confidence 357899999999999999753 34567888888643 33445678899999999999999999998754 36
Q ss_pred eeEEEeccccCCcHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 94 TLNFITEVCTSGNLRTYRKKHR----------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
..++||||+++++|.+++.... .+++..+..++.|++.|+.+||++| ++|+||+|+||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 7899999999999999997532 3789999999999999999999999 999999999999998
Q ss_pred CCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 022956 158 NIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYK 232 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~ 232 (289)
+ +.++|+|||++........ .....++..|+|||.+.+. ++.++||||||+++++|++ |..||....... ..+
T Consensus 159 ~-~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~ 236 (291)
T cd05094 159 N-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIE 236 (291)
T ss_pred C-CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH
Confidence 8 8999999999976543221 2223456789999976544 8899999999999999999 999997654443 333
Q ss_pred HHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCC
Q 022956 233 KVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDD 284 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~ 284 (289)
.+..+..+ ......+..+.+++.+||+ ||++||++.++++ .+.++....
T Consensus 237 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~--~l~~~~~~~ 286 (291)
T cd05094 237 CITQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK--ILHALGKAT 286 (291)
T ss_pred HHhCCCCC-CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH--HHHHHHhhc
Confidence 33333322 2344568899999999998 9999999999998 666664433
No 300
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.4e-40 Score=278.12 Aligned_cols=249 Identities=22% Similarity=0.281 Sum_probs=199.0
Q ss_pred CcccceeeeecccCcceEEEEeecCCC----------------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEG----------------IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY 79 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~----------------~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 79 (289)
++| ++.+.||+|+||.||+|.+..++ ..+|+|.+.... .....+.+.+|++++++++|||
T Consensus 5 ~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 5 QPL-NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred hhC-cccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCC
Confidence 344 78999999999999999876544 558999987543 3355678899999999999999
Q ss_pred eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCC
Q 022956 80 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDL 148 (289)
Q Consensus 80 i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~-----------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl 148 (289)
++++++.+... ...++++|++.+++|.+++.... .+++..+..++.|++.||.|||++| ++|+||
T Consensus 81 i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dl 156 (296)
T cd05051 81 IARLLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDL 156 (296)
T ss_pred EeEEEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccc
Confidence 99999987554 57899999999999999997654 6899999999999999999999999 999999
Q ss_pred CCCceEEeCCCCcEEEeccCCccccCCcc---ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh--CCCCCC
Q 022956 149 NCSNIFINGNIGQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT--MEIPYS 222 (289)
Q Consensus 149 ~~~nili~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t--g~~p~~ 222 (289)
+|+||+++.+ +.++|+|||++....... ......++..|+|||.+.+ .++.++||||||+++|+|++ +..||.
T Consensus 157 kp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 157 ATRNCLVGKN-YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred chhceeecCC-CceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999998 899999999987653322 1223345678999997654 58999999999999999998 678887
Q ss_pred CCCcHHHHHHHHhC-----CCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 223 ECDSVAKIYKKVTG-----GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 223 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.............. .......+...++++.+++.+||+ ||++||++.+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 65444333322211 111111233457899999999998 9999999999976
No 301
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.4e-40 Score=277.89 Aligned_cols=245 Identities=20% Similarity=0.314 Sum_probs=198.6
Q ss_pred cceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.++||+|+||.||++.+..+ +..+|+|+++... .....+.+.+|+.+++.++||||+++++.+... .
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~ 81 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--Q 81 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--C
Confidence 46789999999999999987543 5789999997542 344567788999999999999999999987444 5
Q ss_pred eeEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 94 TLNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
..++++||+.+++|.+++... ..+++..+..++.|++.||.|||++| ++|+||||+||+++.
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 689999999999999998532 34788889999999999999999999 999999999999998
Q ss_pred CCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 022956 158 NIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYK 232 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~ 232 (289)
+ +.++|+|||++........ .....+++.|+|||... +.++.++|+||||+++++|++ |..||.+.... ...+
T Consensus 160 ~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~ 237 (283)
T cd05091 160 K-LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIE 237 (283)
T ss_pred C-CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 8 8999999999876533221 22334567899999664 558999999999999999998 88898775544 3444
Q ss_pred HHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 233 KVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+...... ..+...+..+.+++..||+ +|++||++++|++
T Consensus 238 ~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 238 MIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 44443322 2344578899999999998 9999999999987
No 302
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1e-39 Score=275.17 Aligned_cols=245 Identities=22% Similarity=0.353 Sum_probs=198.3
Q ss_pred cceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.+.||+|+||.||++.++.. +..+|+|.+.... .......+.+|+.+++.++|+|++++++.+... .
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--Q 82 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--C
Confidence 36889999999999999987643 4889999986442 334456788899999999999999999987443 6
Q ss_pred eeEEEeccccCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 94 TLNFITEVCTSGNLRTYRKKH----------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~-~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAED-LTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCC-CCEE
Confidence 789999999999999998642 23678899999999999999999999 9999999999999998 8999
Q ss_pred EeccCCccccCCcc---ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCC
Q 022956 164 IGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGV 238 (289)
Q Consensus 164 l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~ 238 (289)
|+|||++....... ......++..|+|||.+. +.+++++|+||||++++++++ |..||........ ...+..+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~~ 238 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV-LKFVIDGG 238 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH-HHHHhcCC
Confidence 99999987553321 122334567899999765 448999999999999999998 9999976554443 33333332
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.. ..+...+..+.+++.+||+ +|++|||+.++++
T Consensus 239 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HL-DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CC-CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22 2344468999999999998 9999999999987
No 303
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-39 Score=275.91 Aligned_cols=247 Identities=24% Similarity=0.399 Sum_probs=196.3
Q ss_pred cceeeeecccCcceEEEEe----ecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 19 GRYSDLLGSGAVKKVYRAF----DQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
+++.+.||+|+||.||++. +..++..||+|.+... .....+.+.+|+++++.++|||++++++.+...+...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4788999999999999987 4567899999998743 3445678899999999999999999998876555567
Q ss_pred eEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 95 LNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
+++|+||+++++|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESE-NRVKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCC-CeEEECCCcccccc
Confidence 89999999999999999754 46899999999999999999999999 9999999999999988 89999999999866
Q ss_pred CCcccc----ccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------------HHHHHH
Q 022956 174 GRSHAA----HSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSV---------------AKIYKK 233 (289)
Q Consensus 174 ~~~~~~----~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------------~~~~~~ 233 (289)
...... ....++..|+|||...+. ++.++|+||||+++++|++|..++...... ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence 433221 111233458999976644 889999999999999999987665432111 111122
Q ss_pred HhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 234 VTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+...... ......+..+.+|+.+||+ +|++|||+.++++
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 239 LKNNGRL-PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HhcCCcC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 2222111 2234467899999999998 9999999999987
No 304
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.5e-39 Score=271.64 Aligned_cols=239 Identities=21% Similarity=0.385 Sum_probs=194.2
Q ss_pred eecccCcceEEEEeec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 24 LLGSGAVKKVYRAFDQ--EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.||+|+||.||+|.+. .++..+|+|++.... .....+.+.+|+.++++++|+|++++++.+. ....++|+||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~---~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE---AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---CCCeEEEEEe
Confidence 3899999999999764 446679999987542 3445677999999999999999999998762 2468999999
Q ss_pred ccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc-
Q 022956 102 CTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA- 179 (289)
Q Consensus 102 ~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~- 179 (289)
+++++|.+++.. ...+++..+..++.|++.||.+||++| ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQ-HYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCC-CcEEeccCCccccccCCccce
Confidence 999999999875 457899999999999999999999999 9999999999999988 89999999998765433221
Q ss_pred ---ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 180 ---HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 180 ---~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
....++..|+|||.+.. .++.++|+||||+++|++++ |..||....... ....+.++... ..+...++++.++
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~l 230 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMSFIEQGKRL-DCPAECPPEMYAL 230 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHHCCCCC-CCCCCCCHHHHHH
Confidence 11123468999997654 48889999999999999996 999998755443 33444444332 2345568999999
Q ss_pred HHHHHc-CCCCCCCHHHHhc
Q 022956 255 IEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~ 273 (289)
+.+||. ||++||++.+|.+
T Consensus 231 i~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 231 MKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHHcCCChhhCcCHHHHHH
Confidence 999998 9999999999976
No 305
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-39 Score=275.20 Aligned_cols=251 Identities=24% Similarity=0.402 Sum_probs=201.0
Q ss_pred ccceeeeecccCcceEEEEeecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 18 FGRYSDLLGSGAVKKVYRAFDQEEGI----EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 18 ~~~~~~~lg~g~~g~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
.+++.++||+|+||+||+|.+..+|. .||+|.+.... .......+.+|+..++.++|+|++.+++.+.. .
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~ 81 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAGVGSPYVCRLLGICLT---S 81 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC---CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---C
Confidence 34678999999999999999877776 47899886532 34456678899999999999999999988754 3
Q ss_pred eeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
..+++++++++++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~-~~~kL~dfG~~~~ 158 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSP-NHVKITDFGLARL 158 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCC-CcEEECCCCceee
Confidence 47789999999999999976 456899999999999999999999999 9999999999999888 7999999999976
Q ss_pred cCCcccc---ccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 173 VGRSHAA---HSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 173 ~~~~~~~---~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
....... ....+++.|+|||... ..++.++|||||||++|+|++ |..||..... ......+....... .+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~ 236 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-REIPDLLEKGERLP-QPPIC 236 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCcCC-CCccC
Confidence 6433221 1123456899999765 448999999999999999998 8999976443 33334444433322 23446
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+..+.+++.+||+ ||++||++.+++. -+..+.
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~--~l~~~~ 269 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD--EFSRMA 269 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH--HHHHhh
Confidence 8899999999998 9999999999995 344443
No 306
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.7e-40 Score=276.05 Aligned_cols=244 Identities=24% Similarity=0.364 Sum_probs=197.2
Q ss_pred cceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+++.++||+|+||.||++.. ..++..+++|.+... .......+.+|++.++.++|+||+++++.+... .
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 80 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEG--R 80 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--C
Confidence 46789999999999999963 345778999987643 345567899999999999999999999877443 5
Q ss_pred eeEEEeccccCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC
Q 022956 94 TLNFITEVCTSGNLRTYRKKHR---------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~---------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~ 158 (289)
..++++||+++++|.+++.... .+++..+..++.|++.|++|||+.| ++|+||+|+||+++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~ 158 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQG 158 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCC
Confidence 7899999999999999987542 4789999999999999999999999 9999999999999988
Q ss_pred CCcEEEeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 022956 159 IGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKK 233 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~ 233 (289)
+.++|+|||++........ .....+++.|+|||...+ .++.++|+|||||++++|++ |..||............
T Consensus 159 -~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 159 -LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred -CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 8999999999875432211 122234678999996654 48999999999999999998 89999765554444333
Q ss_pred HhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 234 VTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+... ..+...++.+.+++.+||+ ||++||++.++++
T Consensus 238 -~~~~~~-~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 -TQGREL-ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred -HcCccC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 333222 2344568899999999998 9999999999986
No 307
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-39 Score=271.86 Aligned_cols=242 Identities=23% Similarity=0.397 Sum_probs=196.0
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.+.||+|++|.||++.++ ++..+|+|.+..... . ...+.+|+++++.++|+|++++++.+.. .+..++|
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM--S---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--QRPIFIV 77 (256)
T ss_pred cchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC--C---HHHHHHHHHHHHhCCCCCEEEEEEEEcC--CCceEEE
Confidence 467899999999999999875 567899999864332 1 3457789999999999999999987743 3678999
Q ss_pred eccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 99 TEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
+||+++++|.+++.. ...+++..+..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGED-NVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCC-CcEEECCcccceeccccc
Confidence 999999999999875 346899999999999999999999999 9999999999999988 899999999987654322
Q ss_pred ccc--cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 AAH--SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~~~--~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
... ...++..|+|||.+.+ .++.++|+||||+++|++++ |..||....... ....+...... ..+...++.+.+
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 232 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSAGYRL-YRPKLAPTEVYT 232 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHHHcCCcC-CCCCCCCHHHHH
Confidence 111 1123457999997664 48889999999999999999 899997654443 34444443322 233457899999
Q ss_pred HHHHHHc-CCCCCCCHHHHhc
Q 022956 254 FIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~ 273 (289)
++.+||+ +|++||++.++++
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHH
Confidence 9999998 9999999999987
No 308
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.5e-39 Score=277.76 Aligned_cols=246 Identities=25% Similarity=0.400 Sum_probs=200.4
Q ss_pred cceeeeecccCcceEEEEee-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFD-----QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 92 (289)
+.+.+.||+|+||.||++.+ ..++..+|+|.++... .....+.+.+|+++++++ +|+||+++++.+...
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA---HSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC---ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 36789999999999999975 3456689999987543 234467789999999999 799999999987443
Q ss_pred CeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+..++++||+.+++|.+++... ..+++.++..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++++|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHG-KIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCC-CeEEECCCccc
Confidence 5789999999999999998753 34899999999999999999999999 9999999999999988 89999999998
Q ss_pred cccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 171 AIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 171 ~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
........ .....++..|+|||.+.+ .++.++||||||+++++|++ |..||............+...... ..+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~ 267 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM-AQPE 267 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC-CCCC
Confidence 76543221 112234678999996654 48999999999999999998 999998765555555555544332 2334
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..++.+.+++.+||. +|++||++.++++
T Consensus 268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 568899999999998 9999999999987
No 309
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.3e-40 Score=275.08 Aligned_cols=250 Identities=28% Similarity=0.511 Sum_probs=201.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCC-CHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE-DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+.++||+|+||.||++.+..++..+++|+++.....+ .......+..|+.+++.++|||++++++.+... ...+++
T Consensus 3 ~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (260)
T cd08222 3 ILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAFCII 80 (260)
T ss_pred eeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--CceEEE
Confidence 67899999999999999998888888787776543321 222334567789999999999999999887544 568999
Q ss_pred eccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 99 TEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+||+++++|.+++.. +..+++..+..++.|++.|+.+||+.| ++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~--~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN--NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec--CCEeecccCceeecC
Confidence 999999999988853 457899999999999999999999999 999999999999975 479999999987654
Q ss_pred Ccc-ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 175 RSH-AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 175 ~~~-~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
... ......+++.|+|||...+ .++.++|+||||+++++|++|..||........... +..+..+ ..+...+..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 234 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR-IVEGPTP-SLPETYSRQLN 234 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH-HHcCCCC-CCcchhcHHHH
Confidence 322 2233457789999997654 478899999999999999999999976544333333 3333222 23455688999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+++.+||. +|++||++.++++||||
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99999998 99999999999999997
No 310
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-39 Score=272.72 Aligned_cols=247 Identities=22% Similarity=0.399 Sum_probs=198.0
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|++|.||++.+..+ ..+|+|.+..... ..+.+.+|+++++.++|++++++++.+. .+..
T Consensus 6 ~~~-~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~ 75 (260)
T cd05069 6 ESL-RLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM-----MPEAFLQEAQIMKKLRHDKLVPLYAVVS---EEPI 75 (260)
T ss_pred HHe-eeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc-----cHHHHHHHHHHHHhCCCCCeeeEEEEEc---CCCc
Confidence 344 6899999999999999987654 4699998764322 2356788999999999999999988762 2457
Q ss_pred EEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 96 NFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
+++|||+.+++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~-~~~~l~dfg~~~~~ 152 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDN-LVCKIADFGLARLI 152 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CeEEECCCccceEc
Confidence 8999999999999999753 35789999999999999999999999 9999999999999988 89999999999765
Q ss_pred CCccc--cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 174 GRSHA--AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 174 ~~~~~--~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
..... .....++..|+|||... +.++.++|+||||+++++|++ |..||.+..... ....+..+.... .+...+.
T Consensus 153 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 230 (260)
T cd05069 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-VLEQVERGYRMP-CPQGCPE 230 (260)
T ss_pred cCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCC-CCcccCH
Confidence 43221 11233566899999665 448899999999999999999 899998755443 334444443322 2345688
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
.+++++.+||+ ||++||+++++++ ++++
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~i~~--~l~~ 259 (260)
T cd05069 231 SLHELMKLCWKKDPDERPTFEYIQS--FLED 259 (260)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHH--HHhc
Confidence 99999999998 9999999999988 6553
No 311
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.7e-39 Score=271.54 Aligned_cols=245 Identities=23% Similarity=0.394 Sum_probs=198.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|+||.||+|..+ +++.+|+|.+..... ....+.+|+.++++++|+|++++++.+. .+.++++
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~~v 78 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVT---QEPIYII 78 (260)
T ss_pred ceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEc---cCCcEEE
Confidence 478999999999999999864 678899999875432 1356788999999999999999998752 2468999
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+.+++|.+++.. +..++..++..++.|++.||++||+.| ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSET-LCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCC-CCEEEccCcceeecCCC
Confidence 999999999999865 346899999999999999999999999 9999999999999998 89999999998765422
Q ss_pred cc--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HA--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.. .....++..|+|||.+.. .+++++|+||||++++++++ |..||.+..... ....+...... ..+...+.++.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~ 233 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-VIQNLERGYRM-PRPDNCPEELY 233 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-HHHHHHcCCCC-CCCCCCCHHHH
Confidence 11 122334568999997654 48889999999999999999 999998755433 33333333322 23445678999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
+++.+||+ +|++||+++++++ ++++
T Consensus 234 ~li~~~l~~~p~~Rp~~~~l~~--~l~~ 259 (260)
T cd05067 234 ELMRLCWKEKPEERPTFEYLRS--VLED 259 (260)
T ss_pred HHHHHHccCChhhCCCHHHHHH--Hhhc
Confidence 99999998 9999999999988 5554
No 312
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-39 Score=272.03 Aligned_cols=241 Identities=26% Similarity=0.426 Sum_probs=197.5
Q ss_pred eeecccCcceEEEEeecC-CC--cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQE-EG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~-~~--~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++||+|++|.||+|.+.. ++ ..+|+|.+...... ...+.+.+|+..+++++|||++++++.+.. ...++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEE
Confidence 469999999999998765 33 36999999765431 567789999999999999999999988755 6789999
Q ss_pred ccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+++++|.+++.+.. .+++..+..++.|++.||.+||++| ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~-~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASD-DKVKIGDFGLMRALPQNE 151 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecC-CEEEeccccccccccccc
Confidence 9999999999997754 6899999999999999999999999 9999999999999999 899999999997764422
Q ss_pred c----cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 178 A----AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 178 ~----~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
. .....++..|+|||...+ .++.++|+||||+++++|++ |..||......+......... .....+...+..+
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 230 (257)
T cd05040 152 DHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-ERLERPEACPQDI 230 (257)
T ss_pred cceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CcCCCCccCCHHH
Confidence 1 112345678999997664 48999999999999999999 999997655444333333222 2222334567899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhc
Q 022956 252 KAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+++..||+ +|++||++.++++
T Consensus 231 ~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 231 YNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHHCCCCcccCCCHHHHHH
Confidence 999999998 9999999999987
No 313
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4e-40 Score=278.26 Aligned_cols=250 Identities=31% Similarity=0.460 Sum_probs=202.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.++||+|.+|.||++++..+++.+|+|++..... .....+.+.+|+.++++++|++++++++.+... ...++|+
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~~v~ 77 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE--EEGIPSTALREISLLKELKHPNIVKLLDVIHTE--RKLYLVF 77 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccc--cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--CceEEEe
Confidence 467889999999999999999999999999987542 233456677899999999999999999987544 6799999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
|++++ +|.+++... ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 78 e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 78 EYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRD-GVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCC-CCEEEecCCcccccCCCcc
Confidence 99985 899999876 57999999999999999999999999 9999999999999998 8999999999976654332
Q ss_pred -cccCCCCCCCCCCcccc-c-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC-----------------
Q 022956 179 -AHSIIGTPEYMAPELYE-E-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV----------------- 238 (289)
Q Consensus 179 -~~~~~~~~~~~aPE~~~-~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------------- 238 (289)
......+..|+|||.+. . .++.++|+||||++++++++|..||.................
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 22334567899999654 3 488899999999999999999999977554433322221100
Q ss_pred --CCC-------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 239 --KPQ-------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 239 --~~~-------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.+. ......+..+.+++.+||. ||++||++++++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 0011236789999999998 99999999999999998
No 314
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3e-39 Score=269.40 Aligned_cols=241 Identities=23% Similarity=0.395 Sum_probs=200.3
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
..+++.+.||.|++|.||++... |..+|+|.++.... ..+.+.+|+.+++.++|+|++++++.+.. ....+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 76 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLY 76 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeE
Confidence 34478999999999999999765 88999999975421 46778899999999999999999998754 36789
Q ss_pred EEeccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 97 FITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|+||+++++|.+++.... .+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~-~~~~l~d~g~~~~~~ 153 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSED-LVAKVSDFGLAKEAS 153 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCC-CCEEEcccccccccc
Confidence 9999999999999998654 7999999999999999999999999 9999999999999988 899999999998664
Q ss_pred CccccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 175 RSHAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.... ....+..|+|||... +.++.++|+||||++++++++ |..||.... .......+.....+. .+...++.+.
T Consensus 154 ~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (256)
T cd05039 154 QGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPHVEKGYRME-APEGCPPEVY 229 (256)
T ss_pred cccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhcCCCCC-CccCCCHHHH
Confidence 3322 233456799999765 448889999999999999997 999997654 344444444443332 2345689999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+||+ +|++||+++++++
T Consensus 230 ~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 230 KVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHHhccChhhCcCHHHHHH
Confidence 99999998 9999999999987
No 315
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-39 Score=273.36 Aligned_cols=241 Identities=26% Similarity=0.386 Sum_probs=191.4
Q ss_pred eeecccCcceEEEEeecCCCcE--EEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIE--VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+.||+|+||.||+|.++.++.. +++|.++... .....+.+.+|+++++++ +|||++++++.+... +.++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEE
Confidence 4699999999999999888764 5777776321 234456788999999999 799999999987443 5789999
Q ss_pred ccccCCcHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEE
Q 022956 100 EVCTSGNLRTYRKKHR----------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVK 163 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~ 163 (289)
||+++++|.+++.... .+++.++..++.|++.|+.|||+.| ++|+||+|+||+++.+ +.++
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~-~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN-YVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCC-CeEE
Confidence 9999999999987532 4789999999999999999999999 9999999999999998 8999
Q ss_pred EeccCCccccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 164 IGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 164 l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
|+|||++..............+..|+|||.... .++.++|+||||+++++|++ |..||...... ...+.+.......
T Consensus 153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~ 231 (270)
T cd05047 153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLE 231 (270)
T ss_pred ECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-HHHHHHhCCCCCC
Confidence 999999864332211222233567999997654 48889999999999999997 99999764433 3334343332222
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+...+..+.+++.+||+ ||.+|||+.+++.
T Consensus 232 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 232 -KPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred -CCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 233467899999999998 9999999999987
No 316
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=249.53 Aligned_cols=255 Identities=25% Similarity=0.415 Sum_probs=207.4
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+|.+ .++||+|.||+||++++..+++.||+|.++...- ++.......+|+-+++.++|.||++++++.- +++.+-
T Consensus 3 ~ydk-mekigegtygtvfkarn~~t~eivalkrvrlddd--degvpssalreicllkelkhknivrl~dvlh--sdkklt 77 (292)
T KOG0662|consen 3 KYDK-MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLH--SDKKLT 77 (292)
T ss_pred chHH-HHhhcCCcceeeEecccCCccceEEEEEEeccCC--CCCCcHHHHHHHHHHHHhhhcceeehhhhhc--cCceeE
Confidence 4444 6899999999999999999999999999998653 4444566788999999999999999999873 336789
Q ss_pred EEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 97 FITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
+|+|||.. .|..+... ++.++.+.+..++.|++.||.++|+++ +.|+|+||+|.+++.| |.+|++|||+++.++-
T Consensus 78 lvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~n-gelkladfglarafgi 153 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRN-GELKLADFGLARAFGI 153 (292)
T ss_pred EeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccC-CcEEecccchhhhcCC
Confidence 99999976 88888875 578999999999999999999999999 9999999999999999 9999999999998775
Q ss_pred ccc-cccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC-----CCCCCC-
Q 022956 176 SHA-AHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK-----PQALNK- 245 (289)
Q Consensus 176 ~~~-~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~- 245 (289)
+-. ......|..|.+|..+.+. ++...|+||-|||+.|+.. |...|++.+-.++...+...-.. ++.+..
T Consensus 154 pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 542 2334568899999987765 8999999999999999988 77777776655554443322111 111000
Q ss_pred --------------------CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 246 --------------------VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 246 --------------------~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.....-++|++++|. +|.+|+++++.++||+|.+.
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 012345799999998 99999999999999999864
No 317
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3e-39 Score=271.45 Aligned_cols=243 Identities=23% Similarity=0.325 Sum_probs=190.0
Q ss_pred eeecccCcceEEEEeec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 23 DLLGSGAVKKVYRAFDQ--EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.+++.++|||++++++.+... ..+++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEE
Confidence 46999999999999754 3467799998875432 23345688899999999999999999887443 56899999
Q ss_pred cccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 101 VCTSGNLRTYRKKH-----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 101 ~~~~~sL~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
|+++++|.+++... ...+...+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||.+.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTAD-LTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEECCccccccccC
Confidence 99999999998752 24567788899999999999999999 9999999999999988 8999999999865432
Q ss_pred cc---ccccCCCCCCCCCCccccc--------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC---C
Q 022956 176 SH---AAHSIIGTPEYMAPELYEE--------DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK---P 240 (289)
Q Consensus 176 ~~---~~~~~~~~~~~~aPE~~~~--------~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~---~ 240 (289)
.. ......++..|+|||...+ .++.++|+||||+++++|++ |..||............+..... .
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK 232 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC
Confidence 21 1122346778999997653 25779999999999999996 99999876555443333322211 1
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCHHHHhc
Q 022956 241 QALNKVKDPEVKAFIEKCIAQPRARPSASELLK 273 (289)
Q Consensus 241 ~~~~~~~~~~~~~li~~~l~dp~~Rps~~~il~ 273 (289)
.......++.+.++++.|+.+|++|||+++|++
T Consensus 233 ~~~~~~~~~~~~~l~~~c~~~P~~Rpt~~~l~~ 265 (269)
T cd05087 233 PRLKLPLSDRWYEVMQFCWLQPEQRPSAEEVHL 265 (269)
T ss_pred CccCCCCChHHHHHHHHHhcCcccCCCHHHHHH
Confidence 222334578899999999989999999999986
No 318
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-39 Score=276.95 Aligned_cols=245 Identities=26% Similarity=0.390 Sum_probs=198.2
Q ss_pred cceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 92 (289)
+++.+.||+|+||.||++.++.. ...+|+|.+.... .......+.+|+++++++ +|+|++++++.+.. +
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--~ 88 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ--E 88 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--C
Confidence 46789999999999999987643 3789999987532 233456788999999999 89999999998744 3
Q ss_pred CeeEEEeccccCCcHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe
Q 022956 93 NTLNFITEVCTSGNLRTYRKK----------------HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 156 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~ 156 (289)
..++++|||+.+++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~ 166 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVT 166 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEc
Confidence 579999999999999999853 346889999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 022956 157 GNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIY 231 (289)
Q Consensus 157 ~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~ 231 (289)
.+ +.++|+|||++........ .....++..|+|||.+.+ .++.++|||||||++|++++ |..||...... ...
T Consensus 167 ~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~ 244 (293)
T cd05053 167 ED-HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-ELF 244 (293)
T ss_pred CC-CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-HHH
Confidence 88 8999999999986543221 112234567999997654 48899999999999999998 99999875443 344
Q ss_pred HHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 232 KKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+.....+. .+...+..+.+|+.+||. ||++|||+.++++
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 245 KLLKEGYRME-KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred HHHHcCCcCC-CCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 4444443322 334567899999999998 9999999999998
No 319
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.5e-39 Score=269.69 Aligned_cols=244 Identities=27% Similarity=0.455 Sum_probs=201.2
Q ss_pred ceeeeecccCcceEEEEeecCCC----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEG----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++.+.||+|+||.||++.+..++ ..+|+|.++... .....+.+.+|+..++.++|+|++++++.+... +..
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA---DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC---ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--Cee
Confidence 46789999999999999998766 899999997543 222567889999999999999999999988554 679
Q ss_pred EEEeccccCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 96 NFITEVCTSGNLRTYRKKHRH--VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~--l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
++++|++++++|.+++..... +++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGEN-LVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccC-CeEEEcccCCceec
Confidence 999999999999999976544 999999999999999999999999 9999999999999998 89999999999766
Q ss_pred CCccccc--cCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 174 GRSHAAH--SIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 174 ~~~~~~~--~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
....... ...+++.|+|||...+ .++.++|+||||+++++|++ |..||..... ....+.+....... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 231 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEYLKKGYRLP-KPENCPP 231 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcCCCCC-CCCcCCH
Confidence 5432211 2235688999997654 48999999999999999998 7888876443 33344444433332 3344789
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.+++.+||+ ||++|||+.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 232 EIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHHCcCChhhCcCHHHHHh
Confidence 99999999998 9999999999986
No 320
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-39 Score=272.07 Aligned_cols=245 Identities=19% Similarity=0.336 Sum_probs=198.3
Q ss_pred cceeeeecccCcceEEEEeecCCCc---EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGI---EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+++.+.||+|+||.||+|.++.++. .||+|.++... .+.....+..|+..++.++|||++++++.+.. +...
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~ 80 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SRPV 80 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECC--CCce
Confidence 4789999999999999999887765 59999987532 35556789999999999999999999988743 3678
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++|+||+++++|.+++.. .+.+++.++..++.|++.|+.+||++| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~-~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCC-CcEEECCCccccccc
Confidence 999999999999999875 456899999999999999999999999 9999999999999988 899999999987654
Q ss_pred Ccccccc---CC---CCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCC
Q 022956 175 RSHAAHS---II---GTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKV 246 (289)
Q Consensus 175 ~~~~~~~---~~---~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
....... .. .+..|+|||.+.+ .++.++|+||||++++++++ |..||....... ....+........ +..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-~~~~i~~~~~~~~-~~~ 235 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VINAIEQDYRLPP-PMD 235 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-HHHHHHcCCcCCC-ccc
Confidence 3221111 11 1347999997654 48999999999999999887 999997755443 3333433322222 234
Q ss_pred CChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 247 KDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 247 ~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+..+.+++..||+ +|++||++++++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 57889999999998 9999999999987
No 321
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=292.55 Aligned_cols=256 Identities=23% Similarity=0.426 Sum_probs=231.6
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
....||-|+||.|-++..+.....+|+|+++..+.-+ ....+.+..|-.++..++.|.||+++..|.++ +++|++||
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd-tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~--kyvYmLmE 500 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD-TKQQEHVFSERNIMMECRSDFIVRLYRTFRDS--KYVYMLME 500 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccc-hhHHHHHHhHHHHHHhcCchHHHHHHHHhccc--hhhhhhHH
Confidence 3567999999999999887666679999998876542 34466788899999999999999999999665 79999999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAH 180 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~ 180 (289)
-|-||.||..+...+++.+..+..++..+++|++|||++| ++.|||||+|.+++.+ |.+||+|||+|+......+++
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~-Gy~KLVDFGFAKki~~g~KTw 577 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNR-GYLKLVDFGFAKKIGSGRKTW 577 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccC-CceEEeehhhHHHhccCCcee
Confidence 9999999999999999999999999999999999999999 9999999999999999 999999999999999999999
Q ss_pred cCCCCCCCCCCc-ccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 181 SIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 181 ~~~~~~~~~aPE-~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
+.||||.|.||| ++.++.+.+.|.|+||++++||++|..||++.++.. .++.+.++.....++..++....+|+.++.
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-tYn~ILkGid~i~~Pr~I~k~a~~Lik~LC 656 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-TYNLILKGIDKIEFPRRITKTATDLIKKLC 656 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHhhhhhhhcccccchhHHHHHHHHH
Confidence 999999999999 567779999999999999999999999999866654 566677787888888899999999999999
Q ss_pred c-CCCCCCC-----HHHHhcCcccccCCCC
Q 022956 260 A-QPRARPS-----ASELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rps-----~~~il~h~~~~~~~~~ 283 (289)
+ +|.+|.. +.+|-+|.||.+.+|.
T Consensus 657 r~~P~ERLG~~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 657 RDNPTERLGYQKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred hcCcHhhhccccCChHHHHhhhhhhcCChh
Confidence 8 9999965 8999999999999985
No 322
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-39 Score=271.43 Aligned_cols=247 Identities=23% Similarity=0.391 Sum_probs=199.3
Q ss_pred ccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 18 FGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 18 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
.+++.++||+|++|.||++.+. ++..+|+|.+..... ..+.+.+|++.+++++|+|++++++.+.. ....++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPIYI 78 (261)
T ss_pred heeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-----CHHHHHHHHHHHhhCCCCCEeeeeeeeec--CCceEE
Confidence 3478999999999999999875 557899999875432 24568889999999999999999988743 357899
Q ss_pred EeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 98 ITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++||+++++|.+++.+. ..+++..+..++.+++.|+.+||++| ++|+||+|+||+++.+ +.++|+|||.+.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGEN-LVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCC-CCEEECccccceeccc
Confidence 99999999999999764 46899999999999999999999999 9999999999999998 8999999999876543
Q ss_pred ccc--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 176 SHA--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 176 ~~~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
... ......+..|+|||...+ .+++++|+||||++++++++ |+.||.+...... ...+....... .+...+..+
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~ 233 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV-LEQVERGYRMP-RPPNCPEEL 233 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCCCCC-CCCCCCHHH
Confidence 211 112234568999997664 48899999999999999998 9999987554443 33444332222 223347899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 252 KAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
.+++.+||+ +|++||+++++++ +|++
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~l~~--~l~~ 260 (261)
T cd05034 234 YDLMLQCWDKDPEERPTFEYLQS--FLED 260 (261)
T ss_pred HHHHHHHcccCcccCCCHHHHHH--HHhc
Confidence 999999998 9999999999987 5543
No 323
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3e-39 Score=271.19 Aligned_cols=245 Identities=21% Similarity=0.337 Sum_probs=197.9
Q ss_pred cceeeeecccCcceEEEEeecCCCc---EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGI---EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++..+.||+|++|.||+|.++.++. .+++|.++... .....+.+.+|++++++++|+|++++.+.+... +..
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 81 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KPA 81 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CCc
Confidence 3678999999999999999876655 68899886542 234466788999999999999999999987443 578
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++||||+++++|.+++.. ...+++.++..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++++|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSN-LECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCC-CcEEECCCccceecc
Confidence 999999999999999975 357899999999999999999999999 9999999999999988 899999999987654
Q ss_pred Ccccc----ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 175 RSHAA----HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 175 ~~~~~----~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..... .....+..|+|||.+.+ .++.++|+||||+++|++++ |..||....... ....+...... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-~~~~i~~~~~~-~~~~~~~ 236 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-VMKAINDGFRL-PAPMDCP 236 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhcCCCC-CCCCCCC
Confidence 32211 11122457999997654 48899999999999999998 999997655433 44444433222 1233467
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+++.+||+ +|++||++.++++
T Consensus 237 ~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 237 SAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 899999999998 9999999999987
No 324
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.9e-39 Score=276.32 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=194.5
Q ss_pred CcccceeeeecccCcceEEEEeecCC--------------CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEE--------------GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII 81 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~--------------~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 81 (289)
++| ++.++||+|+||.||++.+..+ ...||+|.++... .......+.+|++++++++|+|++
T Consensus 5 ~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 5 QQL-RLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV---TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred HhC-eehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 344 7899999999999999987543 2358999987532 344566789999999999999999
Q ss_pred EeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCC
Q 022956 82 VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLN 149 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~ 149 (289)
++++.+... +..++||||+.+++|.+++.... .+++..+..++.|++.||.|||+.| ++|+||+
T Consensus 81 ~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlk 156 (295)
T cd05097 81 RLLGVCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLA 156 (295)
T ss_pred eEEEEEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccC
Confidence 999988543 67899999999999999986431 3678899999999999999999999 9999999
Q ss_pred CCceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh--CCCCCCC
Q 022956 150 CSNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT--MEIPYSE 223 (289)
Q Consensus 150 ~~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t--g~~p~~~ 223 (289)
|+||+++.+ +.++|+|||++........ .....++..|+|||... +.++.++|+||||+++++|++ +..||..
T Consensus 157 p~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 157 TRNCLVGNH-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhhEEEcCC-CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999988 8999999999876533221 11223456899999655 458999999999999999988 6678876
Q ss_pred CCcHHHHHHHHh-----CCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 224 CDSVAKIYKKVT-----GGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 224 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
............ ........+...++.+.+|+.+||. ||++|||+++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 443332222111 0111122234467899999999998 9999999999976
No 325
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.1e-39 Score=302.61 Aligned_cols=149 Identities=24% Similarity=0.388 Sum_probs=133.7
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++| ++.++||+|+||+||+|.+..+++.||+|+++..... .......+.+|+.+++.++|+||++++..+... ..+
T Consensus 4 ~~y-~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~~~ 79 (669)
T cd05610 4 EEF-VIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI-NKNMVHQVQAERDALALSKSPFIVHLYYSLQSA--NNV 79 (669)
T ss_pred CCE-EEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc-CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC--CEE
Confidence 345 6899999999999999999999999999999765432 345567889999999999999999999877544 689
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
|+||||+.|++|.+++...+.+++..+..++.|++.||.|||+++ ++|+||||+|||++.+ +.++|+|||++.
T Consensus 80 ~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~-g~vkL~DFGls~ 152 (669)
T cd05610 80 YLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNE-GHIKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCC-CCEEEEeCCCCc
Confidence 999999999999999988888999999999999999999999999 9999999999999988 899999999874
No 326
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=306.17 Aligned_cols=247 Identities=22% Similarity=0.376 Sum_probs=210.2
Q ss_pred cccceeeeecccCcceEEEEeecCCC-----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEG-----IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
.-..+.+.||+|.||.||.|....-. ..||+|.++... ++.....|.+|..+++.++||||++++++.++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~---~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS---SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC-
Confidence 33456789999999999999765332 348889887653 566788999999999999999999999999884
Q ss_pred CCeeEEEeccccCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKH-------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
...++++||++||+|..++++. ..++...++.++.++++|+.||++++ ++||||..+|+|++.. ..||+
T Consensus 768 -~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~-r~VKI 843 (1025)
T KOG1095|consen 768 -GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDER-RVVKI 843 (1025)
T ss_pred -CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeeccc-CcEEE
Confidence 5789999999999999999875 35899999999999999999999999 9999999999999999 79999
Q ss_pred eccCCccccCC--c-cccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC
Q 022956 165 GDLGFAAIVGR--S-HAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK 239 (289)
Q Consensus 165 ~d~g~~~~~~~--~-~~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (289)
+|||+|+.... . .......-..+|||||.+. +.++.++||||||+++||++| |..||++.++.+.+.....+++.
T Consensus 844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL 923 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL 923 (1025)
T ss_pred cccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc
Confidence 99999985432 1 1111224467999999766 669999999999999999999 99999998888777767777733
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+..+++.+.+++..||+ +|++||++..|+.
T Consensus 924 --~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 --DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --CCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 3566789999999999999 9999999999998
No 327
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.3e-39 Score=269.77 Aligned_cols=245 Identities=23% Similarity=0.395 Sum_probs=197.6
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|++|.||+|.+. ++..+|+|.+..... . .+.+.+|+.++++++|++++++++.+. ....+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~--~---~~~~~~E~~~l~~l~~~~i~~~~~~~~---~~~~~lv 78 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM--S---PESFLEEAQIMKKLRHDKLVQLYAVVS---EEPIYIV 78 (260)
T ss_pred hhhhheeccccCceEEEEEec-CCceeEEEEecCCCC--C---HHHHHHHHHHHHhcCCCceEEEEeEEC---CCCcEEE
Confidence 378999999999999999765 567799999875433 1 346788999999999999999998762 2457899
Q ss_pred eccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~-~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDG-LVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCC-ceEEeCCceeeeeccCc
Confidence 9999999999998753 45899999999999999999999999 9999999999999988 89999999999765432
Q ss_pred cc--cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HA--AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~--~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.. .....++..|+|||... ..++.++|+||||+++++|++ |..||.+.... .....+..+.... .+...+..+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~ 233 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVERGYRMP-CPQDCPISLH 233 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCCCC-CCCcCCHHHH
Confidence 21 11223456799999665 448899999999999999999 89999775443 3444444433322 2345688999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 253 AFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
+++.+||+ +|++|||++++.+ |+++
T Consensus 234 ~li~~~l~~~p~~Rpt~~~l~~--~l~~ 259 (260)
T cd05070 234 ELMLQCWKKDPEERPTFEYLQS--FLED 259 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHH--HHhc
Confidence 99999998 9999999999987 6654
No 328
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.3e-39 Score=275.08 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=199.0
Q ss_pred ceeeeecccCcceEEEEeecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQE-----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+++++.++||||+++++.+... +.
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 77 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--GP 77 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CC
Confidence 678999999999999998653 23568888886432 234457788999999999999999999887443 56
Q ss_pred eEEEeccccCCcHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 022956 95 LNFITEVCTSGNLRTYRKKH------------------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNC 150 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~------------------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~ 150 (289)
.++++||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp 155 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAA 155 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhh
Confidence 88999999999999998642 24788899999999999999999999 99999999
Q ss_pred CceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCC
Q 022956 151 SNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECD 225 (289)
Q Consensus 151 ~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~ 225 (289)
+||+++.+ +.++|+|||++........ .....++..|+|||... ..++.++||||||+++++|++ |..||.+..
T Consensus 156 ~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 156 RNVLVAEG-RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred heEEEcCC-CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999988 8999999999875532211 12234567899999654 448899999999999999998 999997644
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 226 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.....+.+....... .+...+..+.+++..||+ +|++||++.++++ .|+++
T Consensus 235 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~--~l~~~ 286 (290)
T cd05045 235 -PERLFNLLKTGYRME-RPENCSEEMYNLMLTCWKQEPDKRPTFADISK--ELEKM 286 (290)
T ss_pred -HHHHHHHHhCCCCCC-CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH--HHHHH
Confidence 444455555443332 344568899999999998 9999999999988 55543
No 329
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.8e-39 Score=272.33 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=204.3
Q ss_pred CCcccceeeeecccCcceEEEEeecC----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQE----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
+...+++.+.||+|+||.||+|.+.. ++..+++|.+... ........+.+|+..++.++|+|++++++.+...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 34445789999999999999999876 3578999987632 2455577789999999999999999999877654
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcE
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH--------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV 162 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~--------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~ 162 (289)
+...+++++|+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEE-LQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCC-CcE
Confidence 35788999999999999998753 45889999999999999999999999 9999999999999988 899
Q ss_pred EEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCC
Q 022956 163 KIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGG 237 (289)
Q Consensus 163 ~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~ 237 (289)
+++|||++........ .....++..|+|||.+.+. ++.++||||||++++++++ |..||...... .....+...
T Consensus 157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~ 235 (280)
T cd05043 157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDG 235 (280)
T ss_pred EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcC
Confidence 9999999975432211 1122345679999976644 8899999999999999999 99999875443 344444444
Q ss_pred CCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 238 VKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 238 ~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
..... ....++.+.+++.+||. ||++|||+.++++ .|+++
T Consensus 236 ~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~--~l~~~ 276 (280)
T cd05043 236 YRLAQ-PINCPDELFAVMACCWALDPEERPSFSQLVQ--CLTDF 276 (280)
T ss_pred CCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH--HHHHH
Confidence 33322 34468899999999998 9999999999997 54443
No 330
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.7e-39 Score=271.25 Aligned_cols=243 Identities=23% Similarity=0.381 Sum_probs=195.2
Q ss_pred ceeeeecccCcceEEEEeecCCCcE----EEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIE----VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
++.+.||+|+||+||+|.+..++.. +++|.+... ........+..|+..+++++||||+++++++.. ...
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~ 83 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASL 83 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Ccc
Confidence 6789999999999999998877764 666666432 123445678888889999999999999997632 357
Q ss_pred EEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++++||+++++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~-~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSD-SIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEEcCCccceecc
Confidence 789999999999999975 457899999999999999999999999 9999999999999988 899999999997653
Q ss_pred Cccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 175 RSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 175 ~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
.... .....++..|+|||... +.++.++|+||||+++|++++ |..||.+... ......+..+.... .+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 238 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-HEVPDLLEKGERLA-QPQICTI 238 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCcCC-CCCCCCH
Confidence 2221 12234567899999765 458999999999999999998 9999976543 33344444443322 2344678
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+..++..||. ||.+|||+.+++.
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHH
Confidence 89999999998 9999999999987
No 331
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.3e-39 Score=270.20 Aligned_cols=245 Identities=21% Similarity=0.348 Sum_probs=198.0
Q ss_pred cceeeeecccCcceEEEEeecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEG---IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+++.+.||+|+||.||+|.++.++ ..+|+|.++... .....+.+.+|+.++++++|||++++++.+.. ++..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 80 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKPV 80 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcc
Confidence 368899999999999999886554 379999886533 23446788999999999999999999998744 3678
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++|||+++++|.+++... ..+++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSN-LVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCC-CeEEeCCCCcccccc
Confidence 9999999999999999764 56899999999999999999999999 9999999999999988 899999999997664
Q ss_pred Ccccc----ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 175 RSHAA----HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 175 ~~~~~----~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..... .....+..|+|||.+.+ .++.++|+||||++++++++ |..||....... ....+.+..... .....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 235 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-VIKAIEEGYRLP-APMDCP 235 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-HHHHHhCCCcCC-CCCCCC
Confidence 32211 11122457999997764 58999999999999999887 999997755443 333334332222 233467
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+.+.+++.+||+ +|++||++.++++
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 236 AALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHHHHHHHHcccCchhCCCHHHHHH
Confidence 899999999998 9999999999987
No 332
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=289.13 Aligned_cols=261 Identities=25% Similarity=0.419 Sum_probs=219.4
Q ss_pred CCCCccccee-eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 13 DPSGRFGRYS-DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
+...-|..+. +.||+|-||+||-+++.++|+.||||++..-++..+.+ ..+++|+.+|+.+.||.||.+...+.+.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe--sqlR~EVaILq~l~HPGiV~le~M~ET~- 635 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE--SQLRNEVAILQNLHHPGIVNLECMFETP- 635 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchH--HHHHHHHHHHHhcCCCCeeEEEEeecCC-
Confidence 4455553322 88999999999999999999999999999988865544 7789999999999999999998777443
Q ss_pred CCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--CCcEEEeccC
Q 022956 92 HNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--IGQVKIGDLG 168 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~~~~~l~d~g 168 (289)
+.++.|||-+.|.-|+-.+.+ .++|++..-..++.||+.||.|||-++ ++|.||||+|||+... +.++||||||
T Consensus 636 -ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 636 -ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred -ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeecccc
Confidence 679999999988666666654 578999999999999999999999999 9999999999999654 4689999999
Q ss_pred CccccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCC
Q 022956 169 FAAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVK 247 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
+|+.++......+..|||.|+|||.+.. +|+...|+||.|+|+|--++|..||...++..+..+. ...-.+...+.-+
T Consensus 713 fARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN-AaFMyPp~PW~ei 791 (888)
T KOG4236|consen 713 FARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN-AAFMYPPNPWSEI 791 (888)
T ss_pred ceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhc-cccccCCCchhhc
Confidence 9999988877788899999999997764 5999999999999999999999999865544433321 1122344455567
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
++.+-+||..+|+ .-.+|-|.++.|.|||+++.
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 8899999999999 99999999999999999875
No 333
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-39 Score=276.46 Aligned_cols=247 Identities=28% Similarity=0.420 Sum_probs=198.6
Q ss_pred CcccceeeeecccCcceEEEEeecC-------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeE
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQE-------EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVW 87 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 87 (289)
++| .+.+.||+|+||.||++.+.. ++..+|+|.++... .+.....+.+|+.+++.+ +|||++++++.+
T Consensus 18 ~~~-~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 18 DRL-VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred HHe-EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 455 689999999999999997643 23569999987542 233456788899999999 799999999987
Q ss_pred EeCCCCeeEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 022956 88 LDDQHNTLNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCS 151 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~ 151 (289)
... ...++|+||+++++|.+++... ..++..++..++.|++.||.|||++| ++|+||+|+
T Consensus 94 ~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~ 169 (307)
T cd05098 94 TQD--GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAAR 169 (307)
T ss_pred ecC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHH
Confidence 544 5789999999999999999753 24788999999999999999999999 999999999
Q ss_pred ceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCc
Q 022956 152 NIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDS 226 (289)
Q Consensus 152 nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~ 226 (289)
||+++.+ +.++|+|||.+........ .....++..|+|||.+.+. ++.++|+||||+++|+|++ |..||... +
T Consensus 170 Nill~~~-~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~ 247 (307)
T cd05098 170 NVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-P 247 (307)
T ss_pred heEEcCC-CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-C
Confidence 9999988 8999999999876543211 1112234689999976544 8899999999999999998 88999764 4
Q ss_pred HHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 227 VAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.......+...... ..+...+.++.+++.+||. +|++||++.++++
T Consensus 248 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 248 VEELFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 44555555544332 2344568899999999998 9999999999998
No 334
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.5e-39 Score=271.74 Aligned_cols=252 Identities=25% Similarity=0.416 Sum_probs=203.6
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGI----EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.++| ++.+.||+|+||.||+|.++.+|. .+|+|...... .......+.+|+..+++++|||++++++.+..
T Consensus 6 ~~~~-~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 6 ETEL-EKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET---SPKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred HHHc-EEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 3454 789999999999999999877665 58888876543 24456778899999999999999999998755
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
...++++||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||.
T Consensus 81 --~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~kL~dfg~ 155 (279)
T cd05057 81 --SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTP-QHVKITDFGL 155 (279)
T ss_pred --CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCC-CeEEECCCcc
Confidence 4688999999999999998763 56899999999999999999999999 9999999999999988 8999999999
Q ss_pred ccccCCccccc---cCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCC
Q 022956 170 AAIVGRSHAAH---SIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALN 244 (289)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
+.......... ...++..|+|||... ..++.++|+||||++++++++ |..||.+.... ...+.+..+... ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~ 233 (279)
T cd05057 156 AKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-EIPDLLEKGERL-PQP 233 (279)
T ss_pred cccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHHhCCCCC-CCC
Confidence 97664332211 122356799999665 458899999999999999998 99999875443 344444443222 223
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
...+..+.+++.+||. ||++||++.++++ .|+++
T Consensus 234 ~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~--~l~~~ 268 (279)
T cd05057 234 PICTIDVYMVLVKCWMIDAESRPTFKELIN--EFSKM 268 (279)
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCHHHHHH--HHHHH
Confidence 4467889999999998 9999999999988 66655
No 335
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=281.43 Aligned_cols=245 Identities=26% Similarity=0.435 Sum_probs=191.1
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
..+||+|+||+||+|... +|..||||.+......+ ..+|.+|+.++.+++|||++++++++.+.+. ..++|+||
T Consensus 80 ~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~----~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-~~~LVYEy 153 (361)
T KOG1187|consen 80 SNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG----EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-HRLLVYEY 153 (361)
T ss_pred hcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc----hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-eEEEEEEc
Confidence 468999999999999865 45899999776543211 3459999999999999999999999966532 58999999
Q ss_pred ccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccccCC-cc
Q 022956 102 CTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR-SH 177 (289)
Q Consensus 102 ~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~-~~ 177 (289)
+++|||.+++.... .+++.+.++|+..++.||+|||.. .++++|+|||++|||+|.+ .+.||+|||++..... ..
T Consensus 154 m~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~-~~aKlsDFGLa~~~~~~~~ 232 (361)
T KOG1187|consen 154 MPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED-FNAKLSDFGLAKLGPEGDT 232 (361)
T ss_pred cCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC-CCEEccCccCcccCCcccc
Confidence 99999999998654 899999999999999999999996 4479999999999999999 7999999999966554 32
Q ss_pred ccccC-CCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCC-----cHHHH-HHHHhCC-----CCCCCCC
Q 022956 178 AAHSI-IGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECD-----SVAKI-YKKVTGG-----VKPQALN 244 (289)
Q Consensus 178 ~~~~~-~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~-----~~~~~-~~~~~~~-----~~~~~~~ 244 (289)
..... .|+.+|++||+.. +..+.++||||+|+++.|++||+.+.+... ..... ...+... .++....
T Consensus 233 ~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~ 312 (361)
T KOG1187|consen 233 SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE 312 (361)
T ss_pred ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC
Confidence 22223 7999999999765 569999999999999999999998887432 11121 2222222 1122111
Q ss_pred CCCC--hH---HHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 245 KVKD--PE---VKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 245 ~~~~--~~---~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
...+ .. +..+...|++ +|++||+..|+++
T Consensus 313 ~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 313 GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 2222 23 4566778998 9999999999866
No 336
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.7e-39 Score=283.69 Aligned_cols=245 Identities=28% Similarity=0.417 Sum_probs=198.0
Q ss_pred ceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 93 (289)
.+.++||+|+||.||+|.+. .+++.||+|+++... .....+.+.+|++++.++. ||||+++++.+... +
T Consensus 40 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~--~ 114 (401)
T cd05107 40 VLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA---RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG--G 114 (401)
T ss_pred ehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC---ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC--C
Confidence 35689999999999999853 456789999997643 2333456889999999997 99999999987544 5
Q ss_pred eeEEEeccccCCcHHHHHHhc-----------------------------------------------------------
Q 022956 94 TLNFITEVCTSGNLRTYRKKH----------------------------------------------------------- 114 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~----------------------------------------------------------- 114 (289)
.+++|+||+.+++|.+++...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 789999999999999998542
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEE
Q 022956 115 ---------------------------------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 155 (289)
Q Consensus 115 ---------------------------------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili 155 (289)
..+++..+..++.|++.||.|||+.+ ++|+||+|+||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiLl 272 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVLI 272 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEEE
Confidence 13567788899999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccCCccccCCcc---ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 022956 156 NGNIGQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKI 230 (289)
Q Consensus 156 ~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~ 230 (289)
+.+ +.++|+|||++....... ......++..|+|||.+.+ .+++++|+||||+++++|++ |..||.........
T Consensus 273 ~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 273 CEG-KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred eCC-CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 988 899999999997653221 1122345678999997654 48899999999999999998 89999876655555
Q ss_pred HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 231 YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
...+..+..+. .+...+..+.+++.+||. +|.+||++++|+.
T Consensus 352 ~~~~~~~~~~~-~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 352 YNAIKRGYRMA-KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred HHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 55555543332 344568899999999998 9999999999987
No 337
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-40 Score=297.71 Aligned_cols=259 Identities=25% Similarity=0.364 Sum_probs=188.6
Q ss_pred CcccceeeeecccCcceEEEEeecCC-CcEEEEEEeee-------------cccCCCHHHHHHHHHHHHHHHhCCCCceE
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEE-GIEVAWNQVRL-------------SHFSEDPVLVNRLHSEVQLLRTLKNKYII 81 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~aiK~~~~-------------~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 81 (289)
++| ++.++||+|+||+||++..+.. +...+.|.+.. ............+.+|+.++++++|+||+
T Consensus 148 ~~Y-~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 148 AHF-RVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hcc-EEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 455 7899999999999999865432 22222221110 11111233456788999999999999999
Q ss_pred EeeeeEEeCCCCeeEEEeccccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe
Q 022956 82 VCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH-----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 156 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~ 156 (289)
++++++... +..+++++++.+ +|.+++... ......++..++.|++.||.|||++| ++|+||||+||+++
T Consensus 227 ~l~~~~~~~--~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~ 301 (501)
T PHA03210 227 KIEEILRSE--ANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLN 301 (501)
T ss_pred cEeEEEEEC--CeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEC
Confidence 999988554 568889999965 677766432 23456778899999999999999999 99999999999999
Q ss_pred CCCCcEEEeccCCccccCCccc--cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCC-CCCCC--CcHHHH
Q 022956 157 GNIGQVKIGDLGFAAIVGRSHA--AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEI-PYSEC--DSVAKI 230 (289)
Q Consensus 157 ~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~-p~~~~--~~~~~~ 230 (289)
.+ +.+||+|||++........ .....|+..|+|||.+.+. ++.++|||||||++|+|++|.. |+... ......
T Consensus 302 ~~-~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CD-GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CC-CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 88 8999999999987654322 2345789999999977654 8999999999999999999875 44322 222222
Q ss_pred HHHHhCCC------C------------------C-----CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 231 YKKVTGGV------K------------------P-----QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 231 ~~~~~~~~------~------------------~-----~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.+.+.... + + .......+..+.+++.+||+ ||++|||+.|+|.||||...
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 22221110 0 0 00011245667888999999 99999999999999999875
Q ss_pred C
Q 022956 281 N 281 (289)
Q Consensus 281 ~ 281 (289)
.
T Consensus 461 ~ 461 (501)
T PHA03210 461 E 461 (501)
T ss_pred C
Confidence 4
No 338
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-42 Score=317.98 Aligned_cols=253 Identities=31% Similarity=0.526 Sum_probs=221.6
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+.+.+||+|.||.||-|.+..||+..|+|.++..... ....+.+.+|.+++..++|||+|..+++-+.. ..++|.|
T Consensus 1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR--ekv~IFM 1313 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR--EKVYIFM 1313 (1509)
T ss_pred ccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecH--HHHHHHH
Confidence 4578899999999999999999999999999987653 45567788999999999999999999987665 4588899
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc---
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS--- 176 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~--- 176 (289)
|||++|+|.++++.++-.++.....+..|++.|+.|||++| +||+||||.||+++.+ |.+|++|||.|......
T Consensus 1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFN-GLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecC-CcEEeecccceeEecCchhc
Confidence 99999999999999887888888889999999999999999 9999999999999999 89999999999766433
Q ss_pred --cccccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 177 --HAAHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 177 --~~~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
.......||+.|||||.+.+ +.-.++|||||||++.||+||+.||...++.-.+.-.+-.+..|..... .+++
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~-ls~~ 1469 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER-LSSE 1469 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh-hhHh
Confidence 22345689999999997653 3567899999999999999999999998888777777777766655444 8999
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
-+++|+.||. ||++|-++.|+++|.|-+.-
T Consensus 1470 g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1470 GRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred HHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 9999999998 99999999999999987765
No 339
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.9e-39 Score=266.01 Aligned_cols=240 Identities=25% Similarity=0.421 Sum_probs=195.7
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
++||+|++|.||++.+.. ++.|++|.+..... ......+.+|++++++++|+|++++++.+... ...++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP---PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcC
Confidence 479999999999999877 99999999876533 23466789999999999999999999887544 5789999999
Q ss_pred cCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc--
Q 022956 103 TSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA-- 179 (289)
Q Consensus 103 ~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~-- 179 (289)
.+++|.+++.. ...+++..+..++.+++.++.+||+++ ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 75 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 75 PGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCC-CcEEEeeccccccccCCcceec
Confidence 99999999865 456899999999999999999999999 9999999999999988 89999999998765422111
Q ss_pred -ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 180 -HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 180 -~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.....+..|+|||.+.+ .++.++|+||||+++++|++ |..||....... ....+..... ...+...+..+.+++.
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~li~ 229 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-TRERIESGYR-MPAPQLCPEEIYRLML 229 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-HHHHHhcCCC-CCCCccCCHHHHHHHH
Confidence 11223567999997654 48899999999999999999 889997755433 3333333322 2234456889999999
Q ss_pred HHHc-CCCCCCCHHHHhc
Q 022956 257 KCIA-QPRARPSASELLK 273 (289)
Q Consensus 257 ~~l~-dp~~Rps~~~il~ 273 (289)
+||+ +|++||++.++++
T Consensus 230 ~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 230 QCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHhccChhhCcCHHHHHH
Confidence 9998 9999999999987
No 340
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.5e-39 Score=273.13 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=194.6
Q ss_pred CCCcccceeeeecccCcceEEEEeec----------------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQ----------------EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN 77 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~----------------~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~ 77 (289)
+.++| ++.++||+|+||.||++.+. .++..+|+|.+.... .......+.+|+..++.++|
T Consensus 3 ~~~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~ 78 (296)
T cd05095 3 PRKRL-TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKD 78 (296)
T ss_pred Chhhc-eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCC
Confidence 44565 78999999999999998543 234578999987542 34446778899999999999
Q ss_pred CceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCceec
Q 022956 78 KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHR-----------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHR 146 (289)
Q Consensus 78 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~-----------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~ 146 (289)
+|++++++.+... ...++++||+.+++|.+++.... .+++..+..++.|++.||.|||+.| ++|+
T Consensus 79 ~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~ 154 (296)
T cd05095 79 PNIIRLLAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHR 154 (296)
T ss_pred CCcceEEEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecc
Confidence 9999999987554 57899999999999999987532 3667889999999999999999999 9999
Q ss_pred CCCCCceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh--CCCC
Q 022956 147 DLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT--MEIP 220 (289)
Q Consensus 147 dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t--g~~p 220 (289)
||+|+||+++.+ +.++|+|||++........ ......+..|++||... +.++.++|+||||+++|+|++ |..|
T Consensus 155 dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 155 DLATRNCLVGKN-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred cCChheEEEcCC-CCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 999999999988 8999999999876533221 11223456899999544 558999999999999999998 7788
Q ss_pred CCCCCcHHHHHHHH---hCC--CCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 221 YSECDSVAKIYKKV---TGG--VKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 221 ~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
|............. ... ......+...++.+.+|+..||+ ||++||++.+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 234 YSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 87644333222111 010 01111233467899999999998 9999999999975
No 341
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.9e-39 Score=269.75 Aligned_cols=249 Identities=23% Similarity=0.413 Sum_probs=199.4
Q ss_pred cceeeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+.+.++||+|+||.||+|.+... ...+++|...... .....+.+.+|+.+++.++|||++++++.+.. ...
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~ 81 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT---SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NPV 81 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CCc
Confidence 46789999999999999987544 3568899886442 24556788999999999999999999987743 357
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSP-DCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecC-CCeEEccCceeeecc
Confidence 8999999999999999764 45899999999999999999999999 9999999999999988 899999999987654
Q ss_pred Cccc--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 175 RSHA--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 175 ~~~~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
.... .....++..|+|||.... .++.++|+||||++++++++ |..||.......... .+...... ..+...++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~ 236 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-RIENGERL-PMPPNCPPT 236 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHcCCcC-CCCCCCCHH
Confidence 3321 112233467999997654 48899999999999999986 999998765544433 33333222 234456889
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 251 VKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+.+++.+|+. +|++|||+.++++ .+.++
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~--~l~~~ 265 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKA--QLSDI 265 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHH--HHHHH
Confidence 9999999998 9999999999988 44443
No 342
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.8e-39 Score=270.02 Aligned_cols=245 Identities=22% Similarity=0.371 Sum_probs=198.2
Q ss_pred ceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++.+.||+|+||.||+|..+.+ .+.+++|.+.... .......+.+|++++++++|+|++++++.+.. ...
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 82 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE--AEP 82 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECC--CCc
Confidence 5789999999999999986543 4678888876432 34457789999999999999999999987743 367
Q ss_pred eEEEeccccCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEe
Q 022956 95 LNFITEVCTSGNLRTYRKKHR---------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 165 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~---------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~ 165 (289)
.++|+||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~-~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQ-REVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCC-CcEEEc
Confidence 899999999999999998654 6899999999999999999999999 9999999999999998 899999
Q ss_pred ccCCccccCCcc--ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 166 DLGFAAIVGRSH--AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 166 d~g~~~~~~~~~--~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
|||++....... ......++..|+|||... +..++++|+||||++++++++ |..||....... ....+..+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-~~~~~~~~~~~~ 238 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-VLNRLQAGKLEL 238 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-HHHHHHcCCcCC
Confidence 999986443211 122234566799999665 448889999999999999998 888997654443 333333333222
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
......+..+.+++.+||+ +|++||++.++++
T Consensus 239 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 239 PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 3345578899999999998 9999999999987
No 343
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.9e-39 Score=274.25 Aligned_cols=248 Identities=28% Similarity=0.422 Sum_probs=197.4
Q ss_pred CCcccceeeeecccCcceEEEEeecC-------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeee
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQE-------EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSV 86 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~ 86 (289)
.++| .+.++||+|+||.||+|.+.. ....+|+|.++... .......+.+|+.+++++ +||||++++++
T Consensus 11 ~~~~-~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 11 RDRL-VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred HHHe-eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 3455 579999999999999997532 34579999887432 234466788899999999 69999999998
Q ss_pred EEeCCCCeeEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 022956 87 WLDDQHNTLNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNC 150 (289)
Q Consensus 87 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~ 150 (289)
+... ..+++++||+.+++|.+++... ..++...+..++.|++.||.|||++| ++|+||+|
T Consensus 87 ~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp 162 (314)
T cd05099 87 CTQE--GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAA 162 (314)
T ss_pred EccC--CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccc
Confidence 7543 5789999999999999999653 34788999999999999999999999 99999999
Q ss_pred CceEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCC
Q 022956 151 SNIFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECD 225 (289)
Q Consensus 151 ~nili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~ 225 (289)
+||+++.+ +.++|+|||.+........ .....++..|+|||.+.+ .++.++|+||||+++|+|++ |..||....
T Consensus 163 ~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 163 RNVLVTED-NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred eeEEEcCC-CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 99999988 8999999999976543211 112223467999997654 48899999999999999999 889997643
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 226 SVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.......+...... ..+...+..+.+++.+||+ ||++||++.++++
T Consensus 242 -~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 242 -VEELFKLLREGHRM-DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred -HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 34444444444322 2234567899999999998 9999999999997
No 344
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.8e-39 Score=268.55 Aligned_cols=243 Identities=25% Similarity=0.380 Sum_probs=189.9
Q ss_pred eeecccCcceEEEEeecC--CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 23 DLLGSGAVKKVYRAFDQE--EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
+.||+|+||.||+|.... ....+++|.+.... .......+.+|+..++.++|+||+++++.+... ..+++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEE
Confidence 359999999999996432 34567777765432 344466788899999999999999999987443 57899999
Q ss_pred cccCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 101 VCTSGNLRTYRKKHR-----HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
|+++++|.+++.... ..++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTAD-LSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCC-CcEEEecccccccccc
Confidence 999999999997642 2467788999999999999999999 9999999999999998 8999999999865422
Q ss_pred cc---ccccCCCCCCCCCCcccc--------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC---C
Q 022956 176 SH---AAHSIIGTPEYMAPELYE--------EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK---P 240 (289)
Q Consensus 176 ~~---~~~~~~~~~~~~aPE~~~--------~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~---~ 240 (289)
.. ......++..|+|||.+. ..++.++||||||+++|+|++ |..||....+.......+..... .
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK 232 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC
Confidence 11 112234567799999653 236789999999999999999 78899876655554444443321 2
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCHHHHhc
Q 022956 241 QALNKVKDPEVKAFIEKCIAQPRARPSASELLK 273 (289)
Q Consensus 241 ~~~~~~~~~~~~~li~~~l~dp~~Rps~~~il~ 273 (289)
.......++.+.+++..|+.||++||++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~dp~~Rpt~~~v~~ 265 (269)
T cd05042 233 PQLDLKYSDRWYEVMQFCWLDPETRPTAEEVHE 265 (269)
T ss_pred CcccccCCHHHHHHHHHHhcCcccccCHHHHHH
Confidence 223445678899999999999999999999986
No 345
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-38 Score=264.61 Aligned_cols=240 Identities=23% Similarity=0.384 Sum_probs=194.4
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccc
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
++||+|+||.||++.+. ++..+|+|.+.... .......+.+|+.++++++|||++++++.+... ...++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECC
Confidence 46999999999999864 68899999987542 234455688999999999999999999987544 5789999999
Q ss_pred cCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc--c
Q 022956 103 TSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA--A 179 (289)
Q Consensus 103 ~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~--~ 179 (289)
++++|.+++.. ...+++..+..++.+++.+|.++|++| ++|+||+|+||+++.+ +.++|+|||++........ .
T Consensus 75 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~ 151 (250)
T cd05085 75 PGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSRQEDDGIYSSS 151 (250)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCC-CeEEECCCccceeccccccccC
Confidence 99999999875 346899999999999999999999999 9999999999999988 8999999999865432211 1
Q ss_pred ccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
.....+..|+|||.+.+ .++.++|+||||++++++++ |..||....... ....+...... ..+...+..+.+++.+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~ 229 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-AREQVEKGYRM-SCPQKCPDDVYKVMQR 229 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHHcCCCC-CCCCCCCHHHHHHHHH
Confidence 11233567999997664 48889999999999999998 999998754443 33344444332 2234568999999999
Q ss_pred HHc-CCCCCCCHHHHhc
Q 022956 258 CIA-QPRARPSASELLK 273 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~ 273 (289)
||+ +|++||++.++++
T Consensus 230 ~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 230 CWDYKPENRPKFSELQK 246 (250)
T ss_pred HcccCcccCCCHHHHHH
Confidence 998 9999999999986
No 346
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.6e-39 Score=272.67 Aligned_cols=255 Identities=27% Similarity=0.423 Sum_probs=202.9
Q ss_pred CcccceeeeecccCcceEEEEeec----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQ----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 91 (289)
.+++++.++||+|+||.||++... .++..+|+|.+..... ......+.+|++.++.+.|+|++++++++....
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~ 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE---EQHRSDFEREIEILRTLDHENIVKYKGVCEKPG 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc---hHHHHHHHHHHHHHHhCCCCChheEEeeeecCC
Confidence 455678899999999999999854 3588999999975532 245678999999999999999999998876655
Q ss_pred CCeeEEEeccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+...++++||+++++|.+++.... .+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~ 156 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESE-DLVKISDFGLA 156 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccccc
Confidence 568999999999999999997644 6899999999999999999999999 9999999999999998 89999999999
Q ss_pred cccCCcccc----ccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--------------HHHHH
Q 022956 171 AIVGRSHAA----HSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDS--------------VAKIY 231 (289)
Q Consensus 171 ~~~~~~~~~----~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~--------------~~~~~ 231 (289)
......... ........|++||... ..++.++|+||||+++++|++|..|+..... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 876532211 1223455699999665 4488899999999999999999999865321 11222
Q ss_pred HHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 232 KKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
..+...... ..+...+.++.+++.+||+ +|++||++.++++ .+++
T Consensus 237 ~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~--~l~~ 282 (284)
T cd05038 237 ELLKEGERL-PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL--IVDR 282 (284)
T ss_pred HHHHcCCcC-CCCccCCHHHHHHHHHHhccChhhCCCHHHHHH--HHhh
Confidence 333322222 2234457899999999998 9999999999997 4443
No 347
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-38 Score=267.77 Aligned_cols=249 Identities=24% Similarity=0.404 Sum_probs=201.3
Q ss_pred cceeeeecccCcceEEEEeecC-CCcEEEEEEeeecccC------CCHHHHHHHHHHHHHHHh-CCCCceEEeeeeEEeC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQE-EGIEVAWNQVRLSHFS------EDPVLVNRLHSEVQLLRT-LKNKYIIVCYSVWLDD 90 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~~------~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~ 90 (289)
|++.+.||+|+||.||++.++. +++.+|+|.+...... ........+.+|+.++.+ ++|||++++++.+..
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~- 80 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE- 80 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc-
Confidence 3578999999999999999887 6889999998754321 223445667788888865 799999999998754
Q ss_pred CCCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEe
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIG 165 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~ 165 (289)
++..++++||+++++|.+++.. ...+++..++.++.|++.+|.+||+ .+ ++|+||+|+||+++.+ +.++|+
T Consensus 81 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~-~~~~l~ 156 (269)
T cd08528 81 -NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGED-DKVTIT 156 (269)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCC-CcEEEe
Confidence 3689999999999999988743 4568999999999999999999996 67 9999999999999988 899999
Q ss_pred ccCCccccCCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCC
Q 022956 166 DLGFAAIVGRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALN 244 (289)
Q Consensus 166 d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
|||.+.............++..|+|||...+. ++.++|+||||+++|+|++|..||............. .........
T Consensus 157 dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 235 (269)
T cd08528 157 DFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV-EAVYEPLPE 235 (269)
T ss_pred cccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh-hccCCcCCc
Confidence 99999876554444455678899999976644 8899999999999999999999997655444333333 322222233
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
...++.+.+++.+||+ ||++||++.++.+
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 3568899999999998 9999999999876
No 348
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.4e-39 Score=271.32 Aligned_cols=244 Identities=23% Similarity=0.330 Sum_probs=196.0
Q ss_pred ceeeeecccCcceEEEEeec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ-----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++.+.||+|+||.||+|.+. .++..+|+|.+.... .......+.+|+.++++++|||++++++.+.. +..
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--~~~ 82 (288)
T cd05050 8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAV--GKP 82 (288)
T ss_pred eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--CCc
Confidence 67899999999999999875 367889999987432 34456778899999999999999999987744 357
Q ss_pred eEEEeccccCCcHHHHHHhc----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCc
Q 022956 95 LNFITEVCTSGNLRTYRKKH----------------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSN 152 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~----------------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~n 152 (289)
.++++||+++++|.+++... ..+++..++.++.|++.||.+||+.+ ++|+||+|+|
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~n 160 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATRN 160 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHhh
Confidence 89999999999999998743 24678889999999999999999999 9999999999
Q ss_pred eEEeCCCCcEEEeccCCccccCCcc---ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 022956 153 IFINGNIGQVKIGDLGFAAIVGRSH---AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSV 227 (289)
Q Consensus 153 ili~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 227 (289)
|+++.+ +.++|+|||++....... .......+..|+|||... ..++.++|+||||+++|+|++ |..||.+....
T Consensus 161 il~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 161 CLVGEN-MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred eEecCC-CceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999988 899999999987543221 112223456799999665 448999999999999999998 88898765544
Q ss_pred HHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 228 AKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.... .+..+.... .+...+..+.+++.+||+ ||++||++.|+++
T Consensus 240 ~~~~-~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 EVIY-YVRDGNVLS-CPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHH-HHhcCCCCC-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 4333 333332221 233467899999999998 9999999999976
No 349
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.7e-39 Score=276.58 Aligned_cols=248 Identities=27% Similarity=0.402 Sum_probs=197.5
Q ss_pred cccceeeeecccCcceEEEEeecCC-------CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEE-------GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWL 88 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~ 88 (289)
..+++.+.||+|+||.||+|.+... +..+|+|.++... .....+.+.+|+++++++ +||||+++++.+.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 3457899999999999999976432 2468999887432 334467788999999999 7999999999874
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCc
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSN 152 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~n 152 (289)
.. +.+++++||+++++|.+++... ..++...+..++.|++.||.|||++| ++|+||+|+|
T Consensus 89 ~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~N 164 (334)
T cd05100 89 QD--GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARN 164 (334)
T ss_pred cC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccce
Confidence 43 5789999999999999998753 24778889999999999999999999 9999999999
Q ss_pred eEEeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 022956 153 IFINGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSV 227 (289)
Q Consensus 153 ili~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 227 (289)
|+++.+ +.++|+|||++........ .....++..|+|||.+.+. ++.++||||||+++++|++ |..||.... .
T Consensus 165 ill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~ 242 (334)
T cd05100 165 VLVTED-NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-V 242 (334)
T ss_pred EEEcCC-CcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-H
Confidence 999988 8999999999876543221 1112234679999976544 8899999999999999998 889997744 3
Q ss_pred HHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 228 AKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
......+....... .+...+..+.+++.+||+ +|++||++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKEGHRMD-KPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 44444444433322 234567899999999998 99999999999985
No 350
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-38 Score=272.13 Aligned_cols=245 Identities=28% Similarity=0.424 Sum_probs=197.6
Q ss_pred cceeeeecccCcceEEEEeec-------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQ-------EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDD 90 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 90 (289)
+.+.+.||+|+||.||++.+. .++..+|+|.+.... .......+.+|+.+++.+ +|||++++++.+...
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 368899999999999999742 235579999987432 234457788999999999 899999999987544
Q ss_pred CCCeeEEEeccccCCcHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceE
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKH----------------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIF 154 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~----------------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nil 154 (289)
..++++|||+.+++|.+++.+. ..++...+..++.|++.||.|||++| ++|+||+|+||+
T Consensus 94 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nil 169 (304)
T cd05101 94 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVL 169 (304)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEE
Confidence 5789999999999999998753 24678889999999999999999999 999999999999
Q ss_pred EeCCCCcEEEeccCCccccCCccc---cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 022956 155 INGNIGQVKIGDLGFAAIVGRSHA---AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAK 229 (289)
Q Consensus 155 i~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~ 229 (289)
++.+ +.++|+|||++........ .....++..|+|||.+.+. ++.++||||||+++|+|++ |..||... ....
T Consensus 170 i~~~-~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~ 247 (304)
T cd05101 170 VTEN-NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 247 (304)
T ss_pred EcCC-CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHH
Confidence 9988 8999999999976643221 2223345689999976544 8899999999999999998 78888764 3445
Q ss_pred HHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 230 IYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+.+...... ..+...+..+++++.+||. +|++||++.++++
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 248 LFKLLKEGHRM-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHcCCcC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 55555444332 2344568899999999998 9999999999998
No 351
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-41 Score=266.24 Aligned_cols=261 Identities=23% Similarity=0.396 Sum_probs=208.9
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEe---
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLD--- 89 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 89 (289)
+.++.|-+ ..+||+|.||.||+|..+.+|+.||+|++..... .+..-....+|+++|..|+|+|++.+++.+..
T Consensus 14 ~~~~~yek-~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene--KeGfpitalreikiL~~lkHenv~nliEic~tk~T 90 (376)
T KOG0669|consen 14 DEVSKYEK-LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKAT 90 (376)
T ss_pred ecchHHHH-HHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc--ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence 45677766 7899999999999999999999999998866432 23344567789999999999999988776532
Q ss_pred ---CCCCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEe
Q 022956 90 ---DQHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIG 165 (289)
Q Consensus 90 ---~~~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~ 165 (289)
.....+|+|+++|+. .|..++.+. .+++...+.+++.++.+||.|+|... ++|||+|+.||+++.+ |.++|+
T Consensus 91 p~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~d-gilklA 166 (376)
T KOG0669|consen 91 PTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKD-GILKLA 166 (376)
T ss_pred CcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCC-ceEEee
Confidence 223469999999988 899999876 67999999999999999999999999 9999999999999999 999999
Q ss_pred ccCCccccCCccc-----cccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH--HHHHhC
Q 022956 166 DLGFAAIVGRSHA-----AHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI--YKKVTG 236 (289)
Q Consensus 166 d~g~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~--~~~~~~ 236 (289)
|||+++.+..... -..+..|..|.+||.+-+ ++.++.|||+.|||+.+|+|+..-+.+......+ .+.+.+
T Consensus 167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 9999976643322 223456899999996544 4999999999999999999999888764433332 233333
Q ss_pred CCCCCCCC------------------------------CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 237 GVKPQALN------------------------------KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 237 ~~~~~~~~------------------------------~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
...+..++ ...++...+|+++||+ ||.+|++++++|.|.||..-
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 33222211 1225578899999999 99999999999999999754
No 352
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9.2e-39 Score=266.66 Aligned_cols=233 Identities=23% Similarity=0.365 Sum_probs=187.1
Q ss_pred eeecccCcceEEEEeecCCC----------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 23 DLLGSGAVKKVYRAFDQEEG----------IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~----------~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
++||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++|||++++++.+..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR--- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec---
Confidence 46999999999999998776 347777765432 115778889999999999999999998755
Q ss_pred CeeEEEeccccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC-------cEEE
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHR-HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG-------QVKI 164 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~-------~~~l 164 (289)
...++|+||+++++|.+++.... .++...+..++.|++.||.|||++| ++|+||+|+||+++.+ + .++|
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~-~~~~~~~~~~kl 149 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARY-GLNEGYVPFIKL 149 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecC-ccccCCceeEEe
Confidence 34789999999999999998755 7899999999999999999999999 9999999999999877 5 7999
Q ss_pred eccCCccccCCccccccCCCCCCCCCCccccc---CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCC
Q 022956 165 GDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE---DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKP 240 (289)
Q Consensus 165 ~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~ 240 (289)
+|||++..... .....++..|+|||.+.+ .++.++|+||||+++++|++ |..||.......... .....
T Consensus 150 ~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~~~--- 222 (259)
T cd05037 150 SDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQDQ--- 222 (259)
T ss_pred CCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHhcC---
Confidence 99999886543 222345678999997664 37889999999999999999 688887654322221 11111
Q ss_pred CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 241 QALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 241 ~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
...+......+.+++.+||. +|++||++.++++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 HRLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11222234789999999998 9999999999986
No 353
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.1e-38 Score=263.22 Aligned_cols=241 Identities=23% Similarity=0.416 Sum_probs=195.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|+||.||++.+. ++..+|+|.+..... . ...+.+|++++++++||+++++++.+... ...++++
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~--~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM--S---EEDFIEEAQVMMKLSHPKLVQLYGVCTER--SPICLVF 78 (256)
T ss_pred EEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC--C---HHHHHHHHHHHHhCCCCCeeeEEEEEccC--CceEEEE
Confidence 67899999999999999875 467899999875432 1 34578899999999999999999887443 5789999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||+.+++|.+++... ..++++.+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGEN-QVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCC-CeEEECCCcceeecccCcc
Confidence 999999999998753 56899999999999999999999999 9999999999999988 8999999999876543211
Q ss_pred --cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHH
Q 022956 179 --AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAF 254 (289)
Q Consensus 179 --~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (289)
......+..|+|||...+ .++.++|+||||+++|+|++ |..||..... ....+.+..+... ..+...+..+.+|
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l 233 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETINAGFRL-YKPRLASQSVYEL 233 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHhCCCCC-CCCCCCCHHHHHH
Confidence 112234568999997664 48889999999999999998 9999976443 3444444443222 2234468899999
Q ss_pred HHHHHc-CCCCCCCHHHHhc
Q 022956 255 IEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 255 i~~~l~-dp~~Rps~~~il~ 273 (289)
+.+||+ +|++||++.++++
T Consensus 234 ~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 234 MQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHHHcccChhhCCCHHHHHH
Confidence 999998 9999999999987
No 354
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.8e-38 Score=264.23 Aligned_cols=241 Identities=23% Similarity=0.397 Sum_probs=195.2
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+++.++||+|+||.||++.+. ++..+++|.+... ....+.+.+|++++++++|+|++++++.+.. ...+++
T Consensus 8 ~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05073 8 LKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYII 78 (260)
T ss_pred eeEEeEecCccceEEEEEEec-CCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEEE
Confidence 478999999999999999754 5567999988642 2235678889999999999999999988744 468899
Q ss_pred eccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 99 TEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
+||+++++|.+++.. +..++...+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSAS-LVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCCcceeeccCC
Confidence 999999999999975 346788899999999999999999999 9999999999999998 89999999998765432
Q ss_pred cc--cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 HA--AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 ~~--~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.. .....++..|+|||.+.. .++.++|+||||++++++++ |..||....... ....+.+..... .....+.++.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 233 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYRMP-RPENCPEELY 233 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHhCCCCCC-CcccCCHHHH
Confidence 21 112234567999997654 48889999999999999999 999998754433 333334433222 2345678999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
+++.+||+ +|++||++.++++
T Consensus 234 ~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 234 NIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHH
Confidence 99999998 9999999999886
No 355
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-38 Score=267.94 Aligned_cols=241 Identities=26% Similarity=0.422 Sum_probs=192.5
Q ss_pred eeecccCcceEEEEeecCCC------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 23 DLLGSGAVKKVYRAFDQEEG------IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
+.||+|+||.||++.++... ..+|+|.+.... .......+.+|+..++.++||||+++++++... ...+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeE
Confidence 36999999999999876443 789999986532 223456788899999999999999999987544 5789
Q ss_pred EEeccccCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC-----cEEE
Q 022956 97 FITEVCTSGNLRTYRKKH-------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG-----QVKI 164 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~-----~~~l 164 (289)
+++||+++++|.+++... ..+++.++..++.|++.|+.|||+.+ ++|+||+|+||+++.+ + .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEK-GYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecC-CCCCCcceEE
Confidence 999999999999998642 34788999999999999999999999 9999999999999987 5 8999
Q ss_pred eccCCccccCCcc---ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC
Q 022956 165 GDLGFAAIVGRSH---AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK 239 (289)
Q Consensus 165 ~d~g~~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (289)
+|||++....... ......++..|+|||.+.+ .+++++|+||||+++|+|++ |..||....... ....+..+..
T Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~ 231 (269)
T cd05044 153 GDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQHVTAGGR 231 (269)
T ss_pred CCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHHHHhcCCc
Confidence 9999987553221 1122345678999997654 48999999999999999998 999998655443 3333333222
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
. ......++.+.+++.+||+ +|++||+++++++
T Consensus 232 ~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 232 L-QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred c-CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2 2334568899999999998 9999999999976
No 356
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-38 Score=264.09 Aligned_cols=239 Identities=24% Similarity=0.441 Sum_probs=195.4
Q ss_pred CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+.| ++.+.||+|+||.||++. .+++.+|+|.++... ....+.+|+.+++.++|||++++++.+.. +..
T Consensus 6 ~~~-~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~ 73 (254)
T cd05083 6 QKL-TLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLGVILH---NGL 73 (254)
T ss_pred HHc-eeeeeeccCCCCceEecc--cCCCceEEEeecCcc------hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCc
Confidence 344 689999999999999985 468899999986432 24568889999999999999999988743 347
Q ss_pred EEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc
Q 022956 96 NFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV 173 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~ 173 (289)
++++||+.+++|.+++... ..+++..+..++.|++.|+.+||+.| ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~ 150 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSED-GVAKVSDFGLARVG 150 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CcEEECCCccceec
Confidence 8999999999999999764 35789999999999999999999999 9999999999999988 89999999998754
Q ss_pred CCccccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 174 GRSHAAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 174 ~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
.... .....+..|+|||.+. +.++.++|+||||+++++|++ |..||...... .....+.+...+. .....++.+
T Consensus 151 ~~~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~ 226 (254)
T cd05083 151 SMGV--DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKECVEKGYRME-PPEGCPADV 226 (254)
T ss_pred cccC--CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHHhCCCCCC-CCCcCCHHH
Confidence 3221 1223456899999765 458889999999999999998 99999875443 3444454443332 234568899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhc
Q 022956 252 KAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+++.+||+ +|++||++.+++.
T Consensus 227 ~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 227 YVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHHHcCCChhhCcCHHHHHH
Confidence 999999998 9999999999987
No 357
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.8e-39 Score=264.43 Aligned_cols=227 Identities=20% Similarity=0.297 Sum_probs=184.5
Q ss_pred cCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcH
Q 022956 28 GAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNL 107 (289)
Q Consensus 28 g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL 107 (289)
|.+|+||+|.++.+|+.||+|.+..... ..++...+....|||++++++.+... ..++++|||++|++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---------YSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh---------hhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCH
Confidence 8899999999999999999999975421 22244444556799999999987543 679999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccCCCCCC
Q 022956 108 RTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPE 187 (289)
Q Consensus 108 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 187 (289)
.+++.....+++..+..++.|++.||.+||+.| ++|+||+|+||+++.+ +.++++|||.+....... ....++..
T Consensus 73 ~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~~--~~~~~~~~ 147 (237)
T cd05576 73 WSHISKFLNIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDSC--DGEAVENM 147 (237)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEEEecccchhcccccc--ccCCcCcc
Confidence 999988778999999999999999999999999 9999999999999998 899999999876554321 22345667
Q ss_pred CCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCC
Q 022956 188 YMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 188 ~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~R 265 (289)
|+|||...+ .+++++|+||+|+++++|++|..|+...... .... .....+...++.+++++.+||+ ||++|
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R 220 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTH-TTLNIPEWVSEEARSLLQQLLQFNPTER 220 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccc-cccCCcccCCHHHHHHHHHHccCCHHHh
Confidence 999997654 4889999999999999999999887542211 0000 1112344568899999999998 99999
Q ss_pred CCH-----HHHhcCccc
Q 022956 266 PSA-----SELLKDPFF 277 (289)
Q Consensus 266 ps~-----~~il~h~~~ 277 (289)
|++ ++++.||||
T Consensus 221 ~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 221 LGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCCCccchHHHHcCCCC
Confidence 985 999999997
No 358
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-38 Score=267.21 Aligned_cols=237 Identities=20% Similarity=0.307 Sum_probs=184.9
Q ss_pred eeecccCcceEEEEeecCC------------------------CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCC
Q 022956 23 DLLGSGAVKKVYRAFDQEE------------------------GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK 78 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~------------------------~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 78 (289)
.+||+|+||.||++....+ ...+++|++... .......+.+|+.+++.++||
T Consensus 1 ~~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~ 76 (274)
T cd05076 1 AHLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS----HRDIALAFFETASLMSQVSHI 76 (274)
T ss_pred CCcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCC
Confidence 3699999999999975322 245888888643 233456688899999999999
Q ss_pred ceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 79 YIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 79 ~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
||+++++++... ...++||||+++++|..++.. .+.+++..+..++.|++.||.|||+++ ++|+||+|+||+++.
T Consensus 77 niv~~~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~ 152 (274)
T cd05076 77 HLAFVHGVCVRG--SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLAR 152 (274)
T ss_pred CeeeEEEEEEeC--CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEec
Confidence 999999988654 578999999999999999865 567899999999999999999999999 999999999999975
Q ss_pred C------CCcEEEeccCCccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHH
Q 022956 158 N------IGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMV-TMEIPYSECDSVA 228 (289)
Q Consensus 158 ~------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~-tg~~p~~~~~~~~ 228 (289)
. .+.++++|||.+...... ....++..|+|||.+.+ .+++++|+||||+++|+++ +|..||.......
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3 124899999987544221 12346778999997654 3889999999999999995 6899997654332
Q ss_pred HHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 229 KIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
. ........ ..+...++.+.+++.+||+ +|++||++.+++++
T Consensus 230 ~-~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 230 K-ERFYEKKH---RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred H-HHHHHhcc---CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 2 22222111 1223345789999999998 99999999999974
No 359
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.8e-39 Score=267.35 Aligned_cols=235 Identities=23% Similarity=0.371 Sum_probs=187.4
Q ss_pred eeecccCcceEEEEeecCCCcE-------EEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIE-------VAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~-------~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+.||+|+||.||+|.+..++.. +++|.+... .....+.+.+|+.+++.++|||++++++.+... ...
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCc
Confidence 4699999999999988665443 888887643 234456788899999999999999999988654 468
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCc--------EEEec
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--------VKIGD 166 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~--------~~l~d 166 (289)
++||||+++++|.+++... ..+++..+..++.|++.||.|||++| ++|+||+|+||+++.+ +. ++++|
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~-~~~~~~~~~~~~l~d 151 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIRE-EDRKTGNPPFIKLSD 151 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecc-cccccCCCceEEecc
Confidence 8999999999999999764 45899999999999999999999999 9999999999999876 33 79999
Q ss_pred cCCccccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 167 LGFAAIVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 167 ~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
||.+...... ....++..|+|||.+.+ .++.++|+||||+++|+|++| ..|+........ ....... ...
T Consensus 152 ~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~---~~~ 224 (258)
T cd05078 152 PGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYEDR---HQL 224 (258)
T ss_pred cccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHcc---ccC
Confidence 9988654322 22456778999997764 378899999999999999998 566665443332 2222221 123
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+...+..+.+++.+||+ ||++|||++++++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 225 PAPKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 33456889999999998 9999999999987
No 360
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.1e-38 Score=263.86 Aligned_cols=242 Identities=20% Similarity=0.339 Sum_probs=186.6
Q ss_pred eecccCcceEEEEeecCC--CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 24 LLGSGAVKKVYRAFDQEE--GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.||+|+||+||++....+ ...+++|.+.... .....+.+.+|+..++.++|||++++++.+... ...++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEec
Confidence 599999999999975432 2345556554332 344567889999999999999999999988543 578999999
Q ss_pred ccCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-
Q 022956 102 CTSGNLRTYRKKH----RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS- 176 (289)
Q Consensus 102 ~~~~sL~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~- 176 (289)
+++++|.+++.+. ...++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~-~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSD-LTVKVGDYGIGPSRYKED 153 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCC-ccEEecccccccccCcch
Confidence 9999999999753 34567788899999999999999999 9999999999999988 89999999987643221
Q ss_pred --cccccCCCCCCCCCCccccc--------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCC---CCC
Q 022956 177 --HAAHSIIGTPEYMAPELYEE--------DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVK---PQA 242 (289)
Q Consensus 177 --~~~~~~~~~~~~~aPE~~~~--------~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~---~~~ 242 (289)
.......++..|+|||.+.. .++.++|+||||+++|+|++ |..||............+..... ...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (268)
T cd05086 154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ 233 (268)
T ss_pred hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCc
Confidence 11223456789999997632 25778999999999999997 57788765554444443333211 122
Q ss_pred CCCCCChHHHHHHHHHHcCCCCCCCHHHHhc
Q 022956 243 LNKVKDPEVKAFIEKCIAQPRARPSASELLK 273 (289)
Q Consensus 243 ~~~~~~~~~~~li~~~l~dp~~Rps~~~il~ 273 (289)
.....++.+.+++..||.+|++||++++|++
T Consensus 234 ~~~~~~~~~~~l~~~c~~~P~~Rp~~~~i~~ 264 (268)
T cd05086 234 LELPYSERWYEVLQFCWLSPEKRATAEEVHR 264 (268)
T ss_pred cCCCCcHHHHHHHHHHhhCcccCCCHHHHHH
Confidence 3334678899999999999999999999976
No 361
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.5e-38 Score=262.15 Aligned_cols=242 Identities=23% Similarity=0.372 Sum_probs=190.1
Q ss_pred eeecccCcceEEEEeecC---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQE---EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+.||+|+||.||+|.+.. ++..+|+|.+.... .....+.+.+|+.+++.++|||++++++.+...+ ...++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-GSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-CCcEEEE
Confidence 468999999999998643 34679999875322 3444677888999999999999999998765433 4678999
Q ss_pred ccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 100 EVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
||+.+++|.+++... ..++...+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~-~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDES-FTVKVADFGLARDIYDKEY 153 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCccccccccCCcc
Confidence 999999999999763 45677888999999999999999999 9999999999999988 899999999987543211
Q ss_pred ----ccccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHH
Q 022956 178 ----AAHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM-EIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEV 251 (289)
Q Consensus 178 ----~~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (289)
......++..|+|||.+. ..++.++||||||+++++|++| ..||...... .....+.....+. .+...++.+
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~ 231 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-DITVYLLQGRRLL-QPEYCPDPL 231 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCC-CCCcCCHHH
Confidence 111233466899999765 4488999999999999999995 5666654433 3333444433222 234467899
Q ss_pred HHHHHHHHc-CCCCCCCHHHHhc
Q 022956 252 KAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 252 ~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+++.+||+ +|++||++.+++.
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHH
Confidence 999999998 9999999999987
No 362
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.7e-40 Score=263.98 Aligned_cols=258 Identities=27% Similarity=0.431 Sum_probs=201.0
Q ss_pred cceeeeecccCcceEEEEeecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGI----EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
|....+||+|.||.||+|+.+.++. .+|+|.++...- ........-+|+..++.++|+|++.+..++... +..
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd--~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~~ 102 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD--GTGISMSACREIALLRELKHPNVISLVKVFLSH-DKK 102 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC--CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cce
Confidence 4667889999999999997665543 689999986532 122334566799999999999999999998875 478
Q ss_pred eEEEeccccCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC---CCcEEEec
Q 022956 95 LNFITEVCTSGNLRTYRKK-----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN---IGQVKIGD 166 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~---~~~~~l~d 166 (289)
+++++||.+. .|+..+.. .+.++...+..+++||+.|+.|||++- ++||||||.||++..+ .|+|||+|
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeec
Confidence 9999999988 89888863 357899999999999999999999999 9999999999999654 47999999
Q ss_pred cCCccccCCcccc----ccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCC------------cHH
Q 022956 167 LGFAAIVGRSHAA----HSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECD------------SVA 228 (289)
Q Consensus 167 ~g~~~~~~~~~~~----~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~------------~~~ 228 (289)
+|+++.+..+... .....|..|.|||++-|. |+++.|+|+.|||+.||+|-+..|.+.. +.+
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999988665432 234568899999966543 9999999999999999999887775411 111
Q ss_pred HHHHHHhCCCCCCCCC--------------------------------CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCc
Q 022956 229 KIYKKVTGGVKPQALN--------------------------------KVKDPEVKAFIEKCIA-QPRARPSASELLKDP 275 (289)
Q Consensus 229 ~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~ 275 (289)
.+.+ +.+.+....++ ..-++...+|+.+||+ ||.+|+|++|.|+|+
T Consensus 260 rIf~-vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 260 RIFE-VLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHH-HcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 1111 11221111110 1124557899999999 999999999999999
Q ss_pred ccccCCCC
Q 022956 276 FFSELNDD 283 (289)
Q Consensus 276 ~~~~~~~~ 283 (289)
||..-.-+
T Consensus 339 yF~~d~lp 346 (438)
T KOG0666|consen 339 YFTEDPLP 346 (438)
T ss_pred ccccCCCC
Confidence 99987544
No 363
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.5e-38 Score=263.40 Aligned_cols=236 Identities=22% Similarity=0.359 Sum_probs=184.6
Q ss_pred eeecccCcceEEEEeecC------------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 23 DLLGSGAVKKVYRAFDQE------------EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~------------~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
+.||+|+||.||++.... ....+++|++... .......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 469999999999997532 2335888887543 234456788899999999999999999987544
Q ss_pred CCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCc-------E
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ-------V 162 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~-------~ 162 (289)
...++++||+++++|..++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +. +
T Consensus 77 --~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~~~~~~~~ 151 (262)
T cd05077 77 --VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLARE-GIDGECGPFI 151 (262)
T ss_pred --CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecC-CccCCCCcee
Confidence 567899999999999988875 456899999999999999999999999 9999999999999765 43 8
Q ss_pred EEeccCCccccCCccccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHhCCCC
Q 022956 163 KIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMV-TMEIPYSECDSVAKIYKKVTGGVK 239 (289)
Q Consensus 163 ~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~~~ 239 (289)
+++|||++...... ....++..|+|||.+. ..++.++||||||+++|+|+ +|..||........ ... .....
T Consensus 152 ~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~-~~~~~ 226 (262)
T cd05077 152 KLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERF-YEGQC 226 (262)
T ss_pred EeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHH-HhcCc
Confidence 99999988655322 2234677899999765 34888999999999999997 58888876432222 111 11111
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
. .....++.+.+|+.+||+ ||++||++.+|+.+
T Consensus 227 ~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 227 M--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred c--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 1 122345789999999999 99999999999874
No 364
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=270.65 Aligned_cols=266 Identities=23% Similarity=0.405 Sum_probs=206.7
Q ss_pred CCCCCCceeeC-C-CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC--C
Q 022956 3 DRDGEPFVEVD-P-SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN--K 78 (289)
Q Consensus 3 ~~~~~~~~~~~-~-~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~ 78 (289)
+++|+-+.+++ . .+|| .+..++|+|.||.|-.+.+.+++..||+|+++.. ....+...-|+++|+++.+ |
T Consensus 74 D~dGH~v~~~gD~l~~Ry-~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP 147 (415)
T KOG0671|consen 74 DKDGHYVYQVGDILTNRY-EIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDP 147 (415)
T ss_pred CCCceEEEEeccccccce-ehhhhhcCCcccceEEEeecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCC
Confidence 56776666664 3 5666 6899999999999999999999999999999854 3345556779999999943 3
Q ss_pred c----eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCc
Q 022956 79 Y----IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSN 152 (289)
Q Consensus 79 ~----i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~n 152 (289)
+ ++++.++| +-+++.|+|+|.+ |.|+.+++.++ .+++..++..+++|+++++++||+.+ ++|.||||+|
T Consensus 148 ~g~~rcv~m~~wF--dyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPEN 222 (415)
T KOG0671|consen 148 NGKFRCVQMRDWF--DYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPEN 222 (415)
T ss_pred CCceEEEeeehhh--hccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChhe
Confidence 2 34444444 3447899999999 66999999875 46788999999999999999999999 9999999999
Q ss_pred eEEeCC-------------------CCcEEEeccCCccccCCccccccCCCCCCCCCCccc-ccCCCCcchHHHHHHHHH
Q 022956 153 IFINGN-------------------IGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLL 212 (289)
Q Consensus 153 ili~~~-------------------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Di~slG~il~ 212 (289)
|++... +-.++++|||.|++..... .....|..|.|||++ .=+++.+.||||+||||+
T Consensus 223 ILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ 300 (415)
T KOG0671|consen 223 ILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILV 300 (415)
T ss_pred EEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEE
Confidence 998321 1369999999998776554 445678999999955 456999999999999999
Q ss_pred HHHhCCCCCCCCCcHH--HHHHHHhCCCCCCCCCC-----------------------------------------CCCh
Q 022956 213 EMVTMEIPYSECDSVA--KIYKKVTGGVKPQALNK-----------------------------------------VKDP 249 (289)
Q Consensus 213 ~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~-----------------------------------------~~~~ 249 (289)
|+++|...|.+.++.+ .+.+.+.+..+...+.. ....
T Consensus 301 ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~ 380 (415)
T KOG0671|consen 301 ELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHV 380 (415)
T ss_pred EeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHh
Confidence 9999999998766443 23333333221110000 0112
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.+.+|+++||. ||.+|+|+.|+|.||||+.+.
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 57899999999 999999999999999999864
No 365
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.1e-38 Score=269.89 Aligned_cols=243 Identities=24% Similarity=0.412 Sum_probs=195.2
Q ss_pred ceeeeecccCcceEEEEeecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCee
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGI----EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 95 (289)
+..+.||+|+||.||++.+..+|. .+|+|.+.... .......+.+|+.+++.++|||++++++.+... ..
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~~ 83 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TI 83 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---Cc
Confidence 567899999999999999887776 46888776432 234445688899999999999999999987543 46
Q ss_pred EEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 96 NFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+++++|+++++|.+++... ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.+ +.+||+|||++....
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~-~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSP-NHVKITDFGLARLLE 160 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCC-CceEEcccccccccc
Confidence 7899999999999998764 46899999999999999999999999 9999999999999888 799999999998654
Q ss_pred Cccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 175 RSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 175 ~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
.... .....++..|+|||...+ .++.++||||||+++|++++ |..||.+.. .......+..+.... .+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 238 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-TREIPDLLEKGERLP-QPPICTI 238 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHCCCCCC-CCCCCCH
Confidence 3222 122334678999997654 48899999999999999997 899997643 333344444433222 2344678
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+.+++..||. +|++||+++++++
T Consensus 239 ~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 239 DVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHH
Confidence 89999999998 9999999999988
No 366
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=264.43 Aligned_cols=258 Identities=19% Similarity=0.375 Sum_probs=221.8
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 97 (289)
+++.++||.|+|++|-++.+++|.+.||+|+++..-..+ .+.++....|-.+..+. +||.+|-++.+|.++ ..+++
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfqte--srlff 328 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE--SRLFF 328 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhccc--ceEEE
Confidence 368999999999999999999999999999998765544 34477788888888766 689999999888555 57999
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCc
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRS 176 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~ 176 (289)
|.||++||.|--.++..+.++++.+..+...|+.||.|||++| ++.+|||.+||++|.. |.+||+|+|+++.- ...
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldae-ghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccC-CceeecccchhhcCCCCC
Confidence 9999999999999998899999999999999999999999999 9999999999999999 99999999999653 455
Q ss_pred cccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCC-------CCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 177 HAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYS-------ECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 177 ~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..+...+|||.|.|||+++++ |....|.|+||+++++|+.|+.||+ ....++.+.+.+... ...++...+
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprsls 483 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSLS 483 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccceee
Confidence 567788999999999999987 9999999999999999999999996 223445556666553 344566667
Q ss_pred hHHHHHHHHHHc-CCCCCC------CHHHHhcCcccccCCCCC
Q 022956 249 PEVKAFIEKCIA-QPRARP------SASELLKDPFFSELNDDD 284 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rp------s~~~il~h~~~~~~~~~~ 284 (289)
-.+..+++.-|+ ||.+|. .+.++-.|+||..++|+.
T Consensus 484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~ 526 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDL 526 (593)
T ss_pred hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHH
Confidence 788899999998 999984 468999999999999974
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.6e-38 Score=263.67 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=194.9
Q ss_pred ceeeeecccCcceEEEEeec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC----
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ---EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH---- 92 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---- 92 (289)
++.+.||+|+||.||+|.+. .++..+|+|.+..... .....+.+.+|++++++++|||++++++.+.....
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 57889999999999999854 3578999999975432 34456778899999999999999999998755322
Q ss_pred CeeEEEeccccCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
...+++++|+.+++|.+++... ..++...+..++.|++.|++|||+.| ++|+||+|+||+++.+ +.++++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~-~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNEN-MTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCC-CCEEECc
Confidence 1347889999999998887432 24788999999999999999999999 9999999999999988 8999999
Q ss_pred cCCccccCCccc---cccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 167 LGFAAIVGRSHA---AHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 167 ~g~~~~~~~~~~---~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
||.+........ .....+++.|++||...+ .++.++|+||||+++|+|++ |..||...... .....+.......
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~ 235 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-EIYNYLIKGNRLK 235 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-HHHHHHHcCCcCC
Confidence 999876543221 112234568999996654 48889999999999999999 88998765443 3333333332221
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.....++.+.+++.+||+ +|++||++.+++.
T Consensus 236 -~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 236 -QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 233467899999999998 9999999999987
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=262.08 Aligned_cols=255 Identities=25% Similarity=0.374 Sum_probs=214.4
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEec
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
...||.|+||+|++..++.+|+..|||.++... .+..+.++..|++...+- +.||||++++..+.+ +..|+.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n---~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E--GdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN---IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE--GDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeecc---chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC--CceeeeHH
Confidence 356999999999999999999999999998765 356678888888876555 569999999998877 45899999
Q ss_pred cccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 101 VCTSGNLRTYRK-----KHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 101 ~~~~~sL~~~~~-----~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
.++- ||..+-. +...+++.-+-.+....+.||.||-. .. ++|||+||+|||++.. |.+||||||.+..+.
T Consensus 144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~-G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRH-GDVKLCDFGICGQLV 219 (361)
T ss_pred HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecC-CCEeeecccchHhHH
Confidence 9965 7766542 34679999999999999999999954 47 9999999999999999 999999999998877
Q ss_pred CccccccCCCCCCCCCCcccc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCC----CC
Q 022956 175 RSHAAHSIIGTPEYMAPELYE---EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK----VK 247 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 247 (289)
..-......|-..|+|||.+. .+++.++|+||||++++|+.||+.|+..+++.-+...++..+.++..... ..
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~ 299 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHY 299 (361)
T ss_pred HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccccccc
Confidence 665556667888999999765 23999999999999999999999999998877777777777766554333 25
Q ss_pred ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 248 DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 248 ~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
+..+..++..||. |.+.||...+++++||+........
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~ 338 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGP 338 (361)
T ss_pred CHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCC
Confidence 7889999999997 9999999999999999987655443
No 369
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-40 Score=291.03 Aligned_cols=248 Identities=21% Similarity=0.357 Sum_probs=213.8
Q ss_pred CcccceeeeecccCcceEEEEeecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQEEG---IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
.-|.++.++||.|.||.|+++..+..| ..||||.++... .+..+..|..|+.++-+.+||||+.+-++.. +.
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIMGQFdHPNIIrLEGVVT--ks 702 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIRLEGVVT--KS 702 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhcccCCCCcEEEEEEEEe--cC
Confidence 344568999999999999999988766 559999998764 4666888999999999999999999999984 44
Q ss_pred CeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
+.++||+||+++|+|..++.+ .++++..++..+++.|+.|+.||.+.| ++||||-..|||++.| -.+|++|||+++
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsn-LvCKVsDFGLSR 779 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSN-LVCKVSDFGLSR 779 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccc-eEEEecccccee
Confidence 789999999999999999986 467999999999999999999999999 9999999999999999 799999999999
Q ss_pred ccCCccc-cccCCC---CCCCCCCcc-cccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 172 IVGRSHA-AHSIIG---TPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 172 ~~~~~~~-~~~~~~---~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
...+... ..+..| ..+|.|||. -.+.++.++|+||+|++|||.++ |+.||.+..+.+.+..+..+...|..+.
T Consensus 780 vledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD- 858 (996)
T KOG0196|consen 780 VLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD- 858 (996)
T ss_pred ecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC-
Confidence 8855432 222222 479999995 45779999999999999999988 9999999887777777666665554433
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+|.++.+|+..||+ |..+||.+.||+.
T Consensus 859 -CP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 859 -CPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred -CcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 58999999999998 9999999999988
No 370
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.5e-38 Score=266.35 Aligned_cols=254 Identities=21% Similarity=0.231 Sum_probs=187.7
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCC-HHH------HHHHHHHHHHHHhCCCCceEE
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSED-PVL------VNRLHSEVQLLRTLKNKYIIV 82 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~-~~~------~~~~~~e~~~l~~l~~~~i~~ 82 (289)
+..++.|++.++||+|+||+||+|.+..+ +..+|+|+......... +.. ......+...+..+.|++++.
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 44444558999999999999999998877 66777776543321100 100 011223345566778999999
Q ss_pred eeeeEEeCCC--CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC
Q 022956 83 CYSVWLDDQH--NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 83 ~~~~~~~~~~--~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
+++....... ...+++++++.. ++.+.+......++..+..++.|++.||.|||+.+ ++|+||||+||+++.+ +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~-~ 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGN-N 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-C
Confidence 9886544322 244678887754 77777776666788999999999999999999999 9999999999999988 8
Q ss_pred cEEEeccCCccccCCcc--------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH--
Q 022956 161 QVKIGDLGFAAIVGRSH--------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK-- 229 (289)
Q Consensus 161 ~~~l~d~g~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~-- 229 (289)
.++|+|||++....... ......+++.|+|||...+. ++.++|||||||++++|++|..||........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 99999999997653211 11224689999999977655 89999999999999999999999986532221
Q ss_pred ------HHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 230 ------IYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 230 ------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
....+..+ .......+..+.++++.|++ +|++||+++++++
T Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 244 HAAKCDFIKRLHEG---KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHhHHHHHHHhhhh---hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11222221 11223457889999999999 9999999999986
No 371
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.1e-39 Score=252.87 Aligned_cols=261 Identities=18% Similarity=0.354 Sum_probs=211.9
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 91 (289)
+--+.| ++.+++|.|.++.||.|.+..+++.++||+++.. ..+.+.+|+++|..|. +|||+.++++..+..
T Consensus 35 g~~ddY-eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~ 106 (338)
T KOG0668|consen 35 GNQDDY-EIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPE 106 (338)
T ss_pred cccchH-HHHHHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCcc
Confidence 344555 6899999999999999999999999999999754 3678999999999996 999999999999888
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.....+++|++.+.....+.. .++...+...+.+++.||.|||+.| ++|+|+||.||++|...-.++|+|||+|.
T Consensus 107 SktpaLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 107 SKTPSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred ccCchhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHh
Confidence 889999999998765555444 3888899999999999999999999 99999999999999876789999999999
Q ss_pred ccCCccccccCCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCC-CCCcHHHHHHH---------------
Q 022956 172 IVGRSHAAHSIIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYS-ECDSVAKIYKK--------------- 233 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~-~~~~~~~~~~~--------------- 233 (289)
+......-..+..+.-|.-||.+.. .++...|+|||||++..|+..+.||- +.++.+++..+
T Consensus 182 FYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 182 FYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred hcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 8876655555556667789997664 48999999999999999999888874 33333333211
Q ss_pred ------------HhCCCC-------CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCCC
Q 022956 234 ------------VTGGVK-------PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDSE 286 (289)
Q Consensus 234 ------------~~~~~~-------~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~~ 286 (289)
+.+... ........++++-+|+.++|. |..+|+|+.+++.||||.......+.
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~~~ 334 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAESS 334 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHhhc
Confidence 101100 112233457899999999999 99999999999999999987655544
No 372
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=280.56 Aligned_cols=240 Identities=22% Similarity=0.384 Sum_probs=197.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHH-HhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLL-RTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+...+|.|+|+.|-.+.+..+++.+++|++..... ...+|+.++ ..-+|||+++..+++. .+...|+|
T Consensus 325 ~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~--~~~~~~~v 394 (612)
T KOG0603|consen 325 EFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYE--DGKEIYLV 394 (612)
T ss_pred ccccccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceec--CCceeeee
Confidence 367779999999999999999999999999986521 122355444 3447999999999984 44789999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
||.+.|+-+.+.+...+... ..+..|+.+|+.|+.|||.+| ++||||||+|||++.+.++++|+|||.+......
T Consensus 395 ~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred ehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 99999998888777655455 788899999999999999999 9999999999999533389999999999876554
Q ss_pred cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHH
Q 022956 179 AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEK 257 (289)
Q Consensus 179 ~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 257 (289)
....+-|..|.|||.+... ++++.|+||||+++|+|++|+.||.......++...+.. .......|+.+++|+++
T Consensus 470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~----~~~s~~vS~~AKdLl~~ 545 (612)
T KOG0603|consen 470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQM----PKFSECVSDEAKDLLQQ 545 (612)
T ss_pred hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcC----CccccccCHHHHHHHHH
Confidence 2234568899999977754 999999999999999999999999876555344433332 22337789999999999
Q ss_pred HHc-CCCCCCCHHHHhcCcccc
Q 022956 258 CIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 258 ~l~-dp~~Rps~~~il~h~~~~ 278 (289)
||+ ||.+|+++.+++.||||.
T Consensus 546 LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 546 LLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred hccCChhhCcChhhhccCcchh
Confidence 999 999999999999999993
No 373
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-37 Score=255.79 Aligned_cols=241 Identities=34% Similarity=0.590 Sum_probs=205.2
Q ss_pred CcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHH
Q 022956 29 AVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLR 108 (289)
Q Consensus 29 ~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~ 108 (289)
+||.||++.+..+|+.+++|++....... ..+.+.+|++.+++++|++++++++.+... ...++++|++++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK---KRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc---HHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHH
Confidence 58999999999899999999998654321 157889999999999999999999988554 5789999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccCCCCCCC
Q 022956 109 TYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEY 188 (289)
Q Consensus 109 ~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 188 (289)
+++.....++...+..++.+++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||.+.............++..|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T smart00220 76 DLLKKRGRLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDED-GHVKLADFGLARQLDPGGLLTTFVGTPEY 152 (244)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCC-CcEEEccccceeeeccccccccccCCcCC
Confidence 99987666999999999999999999999999 9999999999999998 89999999999887665455556678899
Q ss_pred CCCcccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCC-CChHHHHHHHHHHc-CCCCC
Q 022956 189 MAPELYE-EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKV-KDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 189 ~aPE~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~-dp~~R 265 (289)
++||... ..+++++|+|+||++++++++|..||..........+.+............ .+..+.+++.+||. +|++|
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 232 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR 232 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence 9999765 448889999999999999999999998755555555555544333222221 67899999999998 99999
Q ss_pred CCHHHHhcCccc
Q 022956 266 PSASELLKDPFF 277 (289)
Q Consensus 266 ps~~~il~h~~~ 277 (289)
|++.++++||||
T Consensus 233 p~~~~~~~~~~~ 244 (244)
T smart00220 233 LTAEEALQHPFF 244 (244)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
No 374
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.7e-38 Score=292.57 Aligned_cols=247 Identities=31% Similarity=0.556 Sum_probs=199.2
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC-----------
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ----------- 91 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----------- 91 (289)
+.||+|+||.||+|+++-+|..||||++.... ......++.+|++.|.+|+|||+|..+..+.++.
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 77999999999999999999999999998764 4556788999999999999999987763221100
Q ss_pred --------------------------------------------------------------------------------
Q 022956 92 -------------------------------------------------------------------------------- 91 (289)
Q Consensus 92 -------------------------------------------------------------------------------- 91 (289)
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence
Q ss_pred ------------------C--------CeeEEEeccccCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHhcCCCCce
Q 022956 92 ------------------H--------NTLNFITEVCTSGNLRTYRKKHRHV-SIKALKKWSKQVLEGLEYLHTHEPCII 144 (289)
Q Consensus 92 ------------------~--------~~~~lv~e~~~~~sL~~~~~~~~~l-~~~~~~~~~~ql~~~l~~lh~~~~~~~ 144 (289)
. ..+||-||||+..+|.+++..+... ....++.++++|++||.|+|+.| ++
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g--iI 719 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG--II 719 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc--ee
Confidence 0 3579999999997788888776554 46789999999999999999999 99
Q ss_pred ecCCCCCceEEeCCCCcEEEeccCCccccC-------------------CccccccCCCCCCCCCCccccc----CCCCc
Q 022956 145 HRDLNCSNIFINGNIGQVKIGDLGFAAIVG-------------------RSHAAHSIIGTPEYMAPELYEE----DYTEM 201 (289)
Q Consensus 145 h~dl~~~nili~~~~~~~~l~d~g~~~~~~-------------------~~~~~~~~~~~~~~~aPE~~~~----~~~~~ 201 (289)
||||||.||+++++ +.|||+|||+++... ......+..||.-|+|||++.+ .|+.+
T Consensus 720 HRDLKP~NIFLd~~-~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K 798 (1351)
T KOG1035|consen 720 HRDLKPRNIFLDSR-NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK 798 (1351)
T ss_pred eccCCcceeEEcCC-CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence 99999999999998 899999999998721 0011234578999999998763 38889
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC--CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 202 VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA--LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 202 ~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
+||||||+|++||+. ||+...........+.++.-|.. .....-+.-+.+|++|++ ||.+|||+.|+|.+.||-
T Consensus 799 iDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 799 IDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred hhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 999999999999996 78876555555555554433332 223334567899999998 999999999999998886
No 375
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=264.21 Aligned_cols=256 Identities=23% Similarity=0.353 Sum_probs=214.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCCCeeEEE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv 98 (289)
++..+||.|+||+|-++..+.|.+.||||+++.....++. ..+--..|-++|..... |.+++++..|.+- +.+|+|
T Consensus 352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD-Dvectm~EKrvLAL~~kppFL~qlHScFQTm--DRLyFV 428 (683)
T KOG0696|consen 352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD-DVECTMVEKRVLALPGKPPFLVQLHSCFQTM--DRLYFV 428 (683)
T ss_pred ceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC-cccceehhhhheecCCCCchHHHHHHHhhhh--hheeeE
Confidence 4678999999999999999999999999999986654322 13333446677766654 5666777776444 579999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCcc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSH 177 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~ 177 (289)
|||+.||.|--.+++-+.+.+..+..++..|+-||-+||++| ++.||||.+||+++.+ |.+||+|||++... -...
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~e-GHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccC-CceEeeecccccccccCCc
Confidence 999999999999999999999999999999999999999999 9999999999999999 99999999999754 3344
Q ss_pred ccccCCCCCCCCCCccc-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHH
Q 022956 178 AAHSIIGTPEYMAPELY-EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIE 256 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 256 (289)
.+...+|||.|+|||+. ..+|....|.||+|+++|||+.|+.||.+.+..+..+.+...+. .++...+.++.++..
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv---syPKslSkEAv~ick 582 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV---SYPKSLSKEAVAICK 582 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC---cCcccccHHHHHHHH
Confidence 56778999999999965 46699999999999999999999999998666665566555543 356667899999999
Q ss_pred HHHc-CCCCCCCH-----HHHhcCcccccCCCCC
Q 022956 257 KCIA-QPRARPSA-----SELLKDPFFSELNDDD 284 (289)
Q Consensus 257 ~~l~-dp~~Rps~-----~~il~h~~~~~~~~~~ 284 (289)
..|. .|.+|... .+|-.||||+.+||..
T Consensus 583 g~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek 616 (683)
T KOG0696|consen 583 GLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEK 616 (683)
T ss_pred HHhhcCCccccCCCCccccchhhCcchhhccHHH
Confidence 9997 99999644 7899999999999964
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=277.58 Aligned_cols=258 Identities=25% Similarity=0.474 Sum_probs=220.1
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeC-
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDD- 90 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~- 90 (289)
++.+.+ .+.+.||.|.+|.||+++++++|+..|+|+....... -++++.|+.+|+.+ .|||++..+++|...
T Consensus 16 dp~d~~-ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-----deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 16 DPADIF-EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-----EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCcc-EEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-----cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 567776 5899999999999999999999999999999876432 35566789999888 579999999988642
Q ss_pred --CCCeeEEEeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 91 --QHNTLNFITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 91 --~~~~~~lv~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
.++.+|||||||.|||..|++.+ +.++.++.+..|++.++.|+.+||.+. ++|+|++-.|||++.+ +.|||+|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e-~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTEN-AEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEecc-CcEEEee
Confidence 34689999999999999999875 678999999999999999999999999 9999999999999999 9999999
Q ss_pred cCCccccCCc-cccccCCCCCCCCCCcccccC------CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCC
Q 022956 167 LGFAAIVGRS-HAAHSIIGTPEYMAPELYEED------YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVK 239 (289)
Q Consensus 167 ~g~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~------~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 239 (289)
||.+...... .......|+|.|||||+.... ++.++|+||||++..||.-|..|+.+..+...+..+ ..+++
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I-pRNPP 245 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-PRNPP 245 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-CCCCC
Confidence 9999887654 345567899999999976532 677899999999999999999999987777666544 45555
Q ss_pred CCCC-CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 240 PQAL-NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 240 ~~~~-~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+... +..-+..+.++|..||. |-++||+..++|+|||+++.
T Consensus 246 PkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 246 PKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 4443 44456789999999997 99999999999999999854
No 377
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=278.00 Aligned_cols=224 Identities=25% Similarity=0.392 Sum_probs=185.2
Q ss_pred ceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEE
Q 022956 9 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWL 88 (289)
Q Consensus 9 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 88 (289)
.++.+...-.. ..+.||+|+||.||+++++++|..||||.+.... .....++.-+|++++++++|+|||+.+++--
T Consensus 6 ~l~~~~~y~W~-~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee 81 (732)
T KOG4250|consen 6 VLTSGENYLWE-MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEE 81 (732)
T ss_pred ccccCCCccee-ehhhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCC
Confidence 34444444443 4789999999999999999999999999998644 2334677888999999999999999998643
Q ss_pred eCC----CCeeEEEeccccCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC--
Q 022956 89 DDQ----HNTLNFITEVCTSGNLRTYRKK---HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI-- 159 (289)
Q Consensus 89 ~~~----~~~~~lv~e~~~~~sL~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~-- 159 (289)
+.. ...-.++||||.||+|...+++ ...|++.+++.++..++.||.|||++| ++||||||.||++..+.
T Consensus 82 ~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedg 159 (732)
T KOG4250|consen 82 TKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDG 159 (732)
T ss_pred ccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCC
Confidence 322 3456889999999999999974 467999999999999999999999999 99999999999995432
Q ss_pred -CcEEEeccCCccccCCccccccCCCCCCCCCCcccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH----HHHHH
Q 022956 160 -GQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYE--EDYTEMVDIYSFGLCLLEMVTMEIPYSECDSV----AKIYK 232 (289)
Q Consensus 160 -~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~----~~~~~ 232 (289)
...||+|||.|+..++.....+..||+.|++||.+. +.++...|.||+||++|+++||..||-..... ...+.
T Consensus 160 q~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~ 239 (732)
T KOG4250|consen 160 QSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH 239 (732)
T ss_pred ceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence 469999999999998888888899999999999877 44888999999999999999999999653332 34455
Q ss_pred HHhCCC
Q 022956 233 KVTGGV 238 (289)
Q Consensus 233 ~~~~~~ 238 (289)
.+.+..
T Consensus 240 ~~tkkp 245 (732)
T KOG4250|consen 240 IITKKP 245 (732)
T ss_pred hhccCC
Confidence 554443
No 378
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=5.4e-37 Score=280.28 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=173.2
Q ss_pred cceeeeecccCcceEEEEeecCC----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEE----eC
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEE----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWL----DD 90 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~ 90 (289)
|.+.++||+|+||.||+|.+..+ +..||+|.+..... . +....+ .++...+.++......+. ..
T Consensus 134 y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 134 FVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--V----EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred eEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--h----HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 36789999999999999999988 99999998763211 1 111111 112222222221111111 13
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRH--------------------VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNC 150 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~--------------------l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~ 150 (289)
.+..+++|+||+.+++|.+++..... .....+..++.|++.||.|||+++ ++|+||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP 283 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKP 283 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCH
Confidence 44678999999999999999875321 123456689999999999999999 99999999
Q ss_pred CceEEeCCCCcEEEeccCCccccCCc--cccccCCCCCCCCCCccccc-C----------------------CCCcchHH
Q 022956 151 SNIFINGNIGQVKIGDLGFAAIVGRS--HAAHSIIGTPEYMAPELYEE-D----------------------YTEMVDIY 205 (289)
Q Consensus 151 ~nili~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~~aPE~~~~-~----------------------~~~~~Di~ 205 (289)
+|||++.+.+.+||+|||++...... .......+++.|+|||.+.. . +..++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 99999975479999999999755322 22334578899999995421 1 22346999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC----------CCC---------CCCCCCChHHHHHHHHHHc-CCCCC
Q 022956 206 SFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV----------KPQ---------ALNKVKDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 206 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------~~~---------~~~~~~~~~~~~li~~~l~-dp~~R 265 (289)
||||++|+|+++..+++. ........+.... ... ......+....+|+.+||+ ||++|
T Consensus 364 SlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred HHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 999999999998766542 2222222221110 000 0011123455689999998 99999
Q ss_pred CCHHHHhcCcccccCCCC
Q 022956 266 PSASELLKDPFFSELNDD 283 (289)
Q Consensus 266 ps~~~il~h~~~~~~~~~ 283 (289)
||++++|+||||++....
T Consensus 442 ~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 442 ISAKAALAHPYFDREGLL 459 (566)
T ss_pred CCHHHHhCCcCcCCCCcc
Confidence 999999999999987654
No 379
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=270.70 Aligned_cols=241 Identities=24% Similarity=0.436 Sum_probs=200.9
Q ss_pred eeeecccCcceEEEEeec----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 22 SDLLGSGAVKKVYRAFDQ----EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
.++||+|-||.||.|... ...--||||.-+..- ..+..+.|.+|..+++.++||||++++|++.+. ..||
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---P~Wi 467 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---PMWI 467 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc---ceeE
Confidence 478999999999999743 223448888887643 345588999999999999999999999998554 6999
Q ss_pred EeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc
Q 022956 98 ITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
|||.++-|.|..+++.+ ..|+...+..+..|++.||.|||+.+ ++||||-..|||+... ..|||+|||+++-....
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp-~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSP-QCVKLADFGLSRYLEDD 544 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCc-ceeeecccchhhhcccc
Confidence 99999999999999864 57999999999999999999999999 9999999999999988 69999999999876432
Q ss_pred --cccccCCCCCCCCCCc-ccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHH
Q 022956 177 --HAAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVK 252 (289)
Q Consensus 177 --~~~~~~~~~~~~~aPE-~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
.....-.-...||||| +-.+.++.++|||.||+.+||+++ |..||.+-.+.+.+-.+..+...| .+..+|+.+.
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP--~P~nCPp~LY 622 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP--CPPNCPPALY 622 (974)
T ss_pred chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC--CCCCCChHHH
Confidence 2233333467999999 455779999999999999999988 999999876666555444444433 4566799999
Q ss_pred HHHHHHHc-CCCCCCCHHHHhc
Q 022956 253 AFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 253 ~li~~~l~-dp~~Rps~~~il~ 273 (289)
.|+.+||. ||.+||.+.+|..
T Consensus 623 slmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 623 SLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHHhccCcccCCcHHHHHH
Confidence 99999999 9999999988765
No 380
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=267.50 Aligned_cols=254 Identities=23% Similarity=0.363 Sum_probs=205.6
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 93 (289)
+.++- +++++||+|-||.|.++.-. .+..||+|+++... ....+..|.+|+++|.+|+||||+.+++++..+ +
T Consensus 536 PRs~L-~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a---~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D--e 608 (807)
T KOG1094|consen 536 PRSRL-RFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA---TKNARNDFLKEIKILSRLKHPNIVELLGVCVQD--D 608 (807)
T ss_pred chhhe-ehhhhhcCcccceeEEEEec-CceEEEEeecCccc---chhHHHHHHHHHHHHhccCCCCeeEEEeeeecC--C
Confidence 44444 57899999999999999653 36899999998654 455678899999999999999999999999766 5
Q ss_pred eeEEEeccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 94 TLNFITEVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
.+++++||++.|.|.+++..+. -+.-.....++.||++|++||.+.+ ++||||.+.|+|++.+ .++|++|||+++
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e-~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGE-FTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCc-ccEEecCccccc
Confidence 7999999999999999999873 2344667789999999999999999 9999999999999999 799999999998
Q ss_pred ccCCcc---ccccCCCCCCCCCCc-ccccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHH--HhCCCCC---
Q 022956 172 IVGRSH---AAHSIIGTPEYMAPE-LYEEDYTEMVDIYSFGLCLLEMVT--MEIPYSECDSVAKIYKK--VTGGVKP--- 240 (289)
Q Consensus 172 ~~~~~~---~~~~~~~~~~~~aPE-~~~~~~~~~~Di~slG~il~~l~t--g~~p~~~~~~~~~~~~~--~~~~~~~--- 240 (289)
...... .........+|+||| ++-+.++.++|+|++|+++||+++ ...||+...++....+. .......
T Consensus 686 ~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 686 NLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred ccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee
Confidence 664332 122334568999999 677889999999999999999866 78999876555443322 1121111
Q ss_pred CCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 241 QALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 241 ~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
...+..++.++.+++-.||+ |.++||+++++-. +|.+
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~--~lq~ 803 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL--FLQE 803 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH--HHHH
Confidence 23456678899999999998 9999999999976 5544
No 381
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=273.00 Aligned_cols=247 Identities=22% Similarity=0.396 Sum_probs=205.6
Q ss_pred ceeeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
++.++||+|.||.|+++.++.. -..||||+++..... .....|.+|+..+.+|+|+|+++++++.++. .++
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~m 186 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAM 186 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhh
Confidence 4678999999999999988644 255999999877642 2688999999999999999999999999774 588
Q ss_pred EEeccccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 97 FITEVCTSGNLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|+|++++|||.+.+.+ ...+....+..++.||+.|+.||.+++ ++||||-..|+++..- ..|||+|||+.+.++
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasp-rtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASP-RTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheeccc-ceeeeecccceeccC
Confidence 99999999999999986 356788899999999999999999999 9999999999999876 699999999999886
Q ss_pred Cccccc----cCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 175 RSHAAH----SIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 175 ~~~~~~----~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
.....+ ...-...|+|||.+. +.++.++|+|++|++||||+| |+.||.+......+..+ ..+.... .+..++
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i-D~~erLp-RPk~cs 341 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI-DAGERLP-RPKYCS 341 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc-cccccCC-CCCCCh
Confidence 554432 223456899999766 559999999999999999999 89999986655544444 3332222 345579
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
+.+.+++..||+ +|.+||++.+|.+.-++
T Consensus 342 edIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 342 EDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred HHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 999999999999 99999999999754333
No 382
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-37 Score=267.13 Aligned_cols=242 Identities=23% Similarity=0.394 Sum_probs=208.0
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
....+||.|-||.||.+.+++-...||||.++.. .-..++|..|+.+++.++|||+|++++++..+ -.+|||+
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--pPFYIiT 342 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--PPFYIIT 342 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhc-----chhHHHHHHHHHHHHhhcCccHHHHhhhhccC--CCeEEEE
Confidence 3568999999999999999999999999999854 33478899999999999999999999999555 5799999
Q ss_pred ccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
||+..|+|.+++... ..++.-.++.++.||.+|+.||..++ ++|+||-..|.|+..+ ..||++|||++++.....
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEn-hiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGEN-HIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhcccccc-ceEEeeccchhhhhcCCc
Confidence 999999999999863 34666788899999999999999999 9999999999999999 899999999998775332
Q ss_pred c--cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 A--AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~--~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
- ....-....|.|||-+. ..++.++|||+||+++||+.| |..||++ -+..+.+..+..+..+.. +..+++.+..
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-idlSqVY~LLEkgyRM~~-PeGCPpkVYe 497 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYGLLEKGYRMDG-PEGCPPKVYE 497 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-ccHHHHHHHHhccccccC-CCCCCHHHHH
Confidence 1 22233567999999554 569999999999999999999 9999998 456667777777776554 5667999999
Q ss_pred HHHHHHc-CCCCCCCHHHHhc
Q 022956 254 FIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il~ 273 (289)
|+..||+ .|.+||++.++-+
T Consensus 498 LMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 498 LMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHHHhcCCcccCccHHHHHH
Confidence 9999999 9999999999854
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=260.54 Aligned_cols=263 Identities=26% Similarity=0.439 Sum_probs=213.3
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecc-cCC--CHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSH-FSE--DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~-~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
..+|| -+...||.|+|+.||+|.+...+..||+|+-.... +.+ .+...+..-+|..+.+.|.||-||++++++.-+
T Consensus 461 Ln~RY-LlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 461 LNDRY-LLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred hHHHH-HHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 45566 57899999999999999999999999999866543 221 233455678899999999999999999988654
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC--CcEEEeccC
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI--GQVKIGDLG 168 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~--~~~~l~d~g 168 (289)
. ..+|-|.|||+|..|.-++.+++.+++.++..|+.||++||.||....+|++|.||||.|||+-.+. |.+||+|||
T Consensus 540 t-dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 T-DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred c-ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 4 5789999999999999999999999999999999999999999999999999999999999995432 789999999
Q ss_pred CccccCCcc--------ccccCCCCCCCCCCcccc-c-C---CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH--
Q 022956 169 FAAIVGRSH--------AAHSIIGTPEYMAPELYE-E-D---YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKK-- 233 (289)
Q Consensus 169 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~-~-~---~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~-- 233 (289)
++....... .+....||-+|+|||.+. + . .+.+.||||.|+|+|+++.|+.||+......++.+.
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 998764321 123356899999999664 2 1 577899999999999999999999864433333321
Q ss_pred -HhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 234 -VTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
+.............+++++++|+.||+ .-++|.+..++-.||+|-
T Consensus 699 IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 699 ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL 745 (775)
T ss_pred hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence 111112222355678999999999999 899999999999999985
No 384
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=276.98 Aligned_cols=242 Identities=29% Similarity=0.418 Sum_probs=194.3
Q ss_pred eeeeecccCcce-EEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEE
Q 022956 21 YSDLLGSGAVKK-VYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 21 ~~~~lg~g~~g~-v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
-.+.+|.|+-|+ ||+|.. .|+.||||.+-. +......+|++.|+.- +||||++.++.- .+..+.||.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~-------e~~~~A~rEi~lL~eSD~H~NviRyyc~E--~d~qF~YIa 581 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLE-------EFFDFAQREIQLLQESDEHPNVIRYYCSE--QDRQFLYIA 581 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhh-------HhHHHHHHHHHHHHhccCCCceEEEEeec--cCCceEEEE
Confidence 357799999885 699976 488999999853 3356778899999888 699999998764 444799999
Q ss_pred eccccCCcHHHHHHhc-C---CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC----CCCcEEEeccCCc
Q 022956 99 TEVCTSGNLRTYRKKH-R---HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING----NIGQVKIGDLGFA 170 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~-~---~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~----~~~~~~l~d~g~~ 170 (289)
.|.|.. +|.++++.+ . .........++.|+++||++||+.+ ++||||||+||||+. ....++|+|||++
T Consensus 582 lELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 582 LELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred ehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccc
Confidence 999977 999999874 1 1122456788999999999999999 999999999999976 2357999999999
Q ss_pred cccCCccc----cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCC
Q 022956 171 AIVGRSHA----AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALN 244 (289)
Q Consensus 171 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
+....... .....|+-+|+|||.+... .+.++|||||||++|+.++ |..||++ ......+++.++.....+.
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd--~~~R~~NIl~~~~~L~~L~ 736 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD--SLERQANILTGNYTLVHLE 736 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc--hHHhhhhhhcCccceeeec
Confidence 98865433 3345689999999988765 6678999999999999999 5899974 4445555666655444444
Q ss_pred CCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccc
Q 022956 245 KVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFS 278 (289)
Q Consensus 245 ~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~ 278 (289)
.....++.+||.+|++ ||..||++.+||.||||=
T Consensus 737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 737 PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 4334489999999999 999999999999999983
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.2e-35 Score=260.60 Aligned_cols=260 Identities=21% Similarity=0.273 Sum_probs=180.1
Q ss_pred CcccceeeeecccCcceEEEEeec----------------CCCcEEEEEEeeecccCCCHHH----------HHHHHHHH
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQ----------------EEGIEVAWNQVRLSHFSEDPVL----------VNRLHSEV 69 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~----------------~~~~~~aiK~~~~~~~~~~~~~----------~~~~~~e~ 69 (289)
+.| ++.++||+|+||+||++.+. ..+..||||.+.........+. .+....|+
T Consensus 145 d~F-~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 145 DDF-QLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred cCc-eEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 344 67899999999999999642 2356799999875432111111 11233466
Q ss_pred HHHHhCCCCce-----EEeeeeEEeC------CCCeeEEEeccccCCcHHHHHHhc------------------------
Q 022956 70 QLLRTLKNKYI-----IVCYSVWLDD------QHNTLNFITEVCTSGNLRTYRKKH------------------------ 114 (289)
Q Consensus 70 ~~l~~l~~~~i-----~~~~~~~~~~------~~~~~~lv~e~~~~~sL~~~~~~~------------------------ 114 (289)
.++.+++|.++ +.+++++... .....++|+||+++++|.+++...
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777776654 3444444221 124579999999999999988631
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccccc--CCCCCCCCCCc
Q 022956 115 RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHS--IIGTPEYMAPE 192 (289)
Q Consensus 115 ~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~~aPE 192 (289)
..+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.+ +.++|+|||++........... ...++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVD-GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCC-CcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12356678899999999999999999 9999999999999988 8999999999965533222222 23478999999
Q ss_pred ccccC-----------------------CCCcchHHHHHHHHHHHHhCCC-CCCCCCcHHHH----------HHHHhCCC
Q 022956 193 LYEED-----------------------YTEMVDIYSFGLCLLEMVTMEI-PYSECDSVAKI----------YKKVTGGV 238 (289)
Q Consensus 193 ~~~~~-----------------------~~~~~Di~slG~il~~l~tg~~-p~~~~~~~~~~----------~~~~~~~~ 238 (289)
.+... .....|+||+||++++|+++.. |+.+....... ........
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 65421 1124699999999999999875 76542211111 11111111
Q ss_pred CCCCCCCCCChHHHHHHHHHHc-CC---CCCCCHHHHhcCccccc
Q 022956 239 KPQALNKVKDPEVKAFIEKCIA-QP---RARPSASELLKDPFFSE 279 (289)
Q Consensus 239 ~~~~~~~~~~~~~~~li~~~l~-dp---~~Rps~~~il~h~~~~~ 279 (289)
.........++..++|+.+||. +| .+|+|++|+|+||||..
T Consensus 461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 1122234468899999999996 55 67999999999999964
No 386
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-36 Score=262.77 Aligned_cols=257 Identities=22% Similarity=0.367 Sum_probs=210.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.+.||=|+||.|.++....|...||+|.++..... .......++.|-++|.....+-+|+++..|.+. +.+|+||||
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyySFQDk--dnLYFVMdY 710 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNLYFVMDY 710 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC--CceEEEEec
Confidence 46799999999999999999999999999865432 223345688899999999999999999888444 679999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC-------
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG------- 174 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~------- 174 (289)
++||.+-.++.+.+-+.+..+..++..+..|+++.|..| ++||||||+|||||.+ |.+||+|||+++-+-
T Consensus 711 IPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrd-GHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 711 IPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccC-Cceeeeeccccccceecccccc
Confidence 999999999988888999999999999999999999999 9999999999999999 999999999996530
Q ss_pred -Cccc-----------------------------------cccCCCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHhC
Q 022956 175 -RSHA-----------------------------------AHSIIGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVTM 217 (289)
Q Consensus 175 -~~~~-----------------------------------~~~~~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~tg 217 (289)
..+. .....||+.|+|||++. .+++...|.||.|+|||+|+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 0000 01246899999999665 4599999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHH-hCCCCCCCCCCCCChHHHHHHHHHHcCCCCCC---CHHHHhcCcccccCCCCC
Q 022956 218 EIPYSECDSVAKIYKKV-TGGVKPQALNKVKDPEVKAFIEKCIAQPRARP---SASELLKDPFFSELNDDD 284 (289)
Q Consensus 218 ~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~dp~~Rp---s~~~il~h~~~~~~~~~~ 284 (289)
+.||............+ .++..........+.+..+||.++..+++.|. .++||-.||||+.+|+.+
T Consensus 868 ~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfss 938 (1034)
T KOG0608|consen 868 QPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFSS 938 (1034)
T ss_pred CCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchHh
Confidence 99997644433322222 22333444556678999999999888777774 567899999999999865
No 387
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=243.11 Aligned_cols=257 Identities=26% Similarity=0.354 Sum_probs=208.8
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCC--
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQ-- 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 91 (289)
...||.. .+.+|.|.. .|..+.+.-++.+||+|++-.... +....++..+|.+.+..+.|+|++.++.+|.-.+
T Consensus 15 v~~Ry~n-L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~--n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 15 VPKRYVN-LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQ--NQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL 90 (369)
T ss_pred eeeeeee-ecccCCCCc-eEEecchhhccCceehhhhcCccc--cCccchhhhhhhhhhhhhcccceeeeeeccCccccH
Confidence 4456654 788999999 899999999999999999976632 3444677889999999999999999999885321
Q ss_pred --CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 --HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 --~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
-..+|+|||++.. +|...+. -.++.+.+..+++|++.|++|||+.| ++||||||+||++..+ ..+|++|||+
T Consensus 91 ~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~-~~lKi~dfg~ 164 (369)
T KOG0665|consen 91 EEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSD-CTLKILDFGL 164 (369)
T ss_pred HHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecch-hheeeccchh
Confidence 2357999999977 8988877 33788899999999999999999999 9999999999999999 8999999999
Q ss_pred ccccCCccccccCCCCCCCCCCcc-cccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCC--------
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKP-------- 240 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 240 (289)
+......-.......+.-|.|||+ +.-.+.+..||||+||++.+|++|...|.+.+..++..+.+....-+
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 987766645566778889999994 45559999999999999999999999998876666655433332110
Q ss_pred -------------------------C------CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 241 -------------------------Q------ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 241 -------------------------~------~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
. .........+++|+.+||. ||++|.|++++|+||+++-|
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 0 0111224568999999998 99999999999999999944
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=7.8e-37 Score=261.25 Aligned_cols=254 Identities=24% Similarity=0.383 Sum_probs=202.9
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC------CceEEeeeeE
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN------KYIIVCYSVW 87 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~ 87 (289)
..++| .+....|+|-||+|.+|.+..-|..||||++.. ++...+.=..|+++|++|.. -|++.++..|
T Consensus 430 LD~RY-~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn-----NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F 503 (752)
T KOG0670|consen 430 LDSRY-EVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN-----NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF 503 (752)
T ss_pred hccee-EEEeccccceeeeeeeccccCCCCeeEEEEeec-----chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence 34454 678899999999999999999999999999985 45556777889999999963 3778888777
Q ss_pred EeCCCCeeEEEeccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 88 LDDQHNTLNFITEVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
... +++|+|+|.+.- +|.+.+.+. -.|....+..++.|+..||..|-..| ++|.||||+|||++.+.+.+||
T Consensus 504 ~hk--nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 504 KHK--NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred hhc--ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeee
Confidence 443 789999999954 999999874 35888999999999999999999999 9999999999999998889999
Q ss_pred eccCCccccCCccccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH--HHhCCCCCC
Q 022956 165 GDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK--KVTGGVKPQ 241 (289)
Q Consensus 165 ~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~--~~~~~~~~~ 241 (289)
||||.|.+.+....+ ++..+.-|.|||+.-| .|+.+.|+||.||+|||+.||+..|++..+...+.- .+.+..+..
T Consensus 579 CDfGSA~~~~eneit-PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 579 CDFGSASFASENEIT-PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred ccCcccccccccccc-HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 999999988765433 3334557899996554 599999999999999999999999998655544321 111111100
Q ss_pred C---------------------------------C----C------------CC------CChHHHHHHHHHHc-CCCCC
Q 022956 242 A---------------------------------L----N------------KV------KDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 242 ~---------------------------------~----~------------~~------~~~~~~~li~~~l~-dp~~R 265 (289)
. + + .. .-..+++|+.+||. ||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 0 0 0 00 01367899999999 99999
Q ss_pred CCHHHHhcCccccc
Q 022956 266 PSASELLKDPFFSE 279 (289)
Q Consensus 266 ps~~~il~h~~~~~ 279 (289)
.+..|+|+||||..
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999974
No 389
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=241.52 Aligned_cols=140 Identities=27% Similarity=0.415 Sum_probs=117.8
Q ss_pred CceeeC-CC-CcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-----C---
Q 022956 8 PFVEVD-PS-GRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-----N--- 77 (289)
Q Consensus 8 ~~~~~~-~~-~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~--- 77 (289)
|..+.+ .. +|| -+.+|||+|-|+|||++.|..+...||+|+++- .+...+....|+++|++++ |
T Consensus 68 pV~IGD~F~~gRY-~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-----AqhYtEaAlDEIklL~~v~~~Dp~~~~~ 141 (590)
T KOG1290|consen 68 PVRIGDVFNGGRY-HVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-----AQHYTEAALDEIKLLQQVREGDPNDPGK 141 (590)
T ss_pred eeeccccccCceE-EEEEeccccccceeEEEeeccCCeEEEEEEEeh-----hhHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 444444 33 666 689999999999999999999999999999984 3555677888999999984 2
Q ss_pred CceEEeeeeEEe--CCCCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCc
Q 022956 78 KYIIVCYSVWLD--DQHNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSN 152 (289)
Q Consensus 78 ~~i~~~~~~~~~--~~~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~n 152 (289)
.+||++++.|.. ..+.++|+|+|++ |.+|..++..+ +.++...+.+|++|++.||.|||.. | ++|.||||+|
T Consensus 142 ~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPEN 218 (590)
T KOG1290|consen 142 KCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPEN 218 (590)
T ss_pred ceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcce
Confidence 368999998864 3457899999999 55999998764 5699999999999999999999987 7 9999999999
Q ss_pred eEEe
Q 022956 153 IFIN 156 (289)
Q Consensus 153 ili~ 156 (289)
||+.
T Consensus 219 vLl~ 222 (590)
T KOG1290|consen 219 VLLC 222 (590)
T ss_pred eeee
Confidence 9983
No 390
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=263.09 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=206.3
Q ss_pred ceeeeecccCcceEEEEeec----C---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCC
Q 022956 20 RYSDLLGSGAVKKVYRAFDQ----E---EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~----~---~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 91 (289)
.+.+.||+|.||.|+++..+ . ....||||..+.... ....+.+..|+++++.+ .|+|++.+++.+..
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~---~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS---SSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccC---cHHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 45679999999999999633 1 146799999987653 35678899999999999 59999999998855
Q ss_pred CCeeEEEeccccCCcHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEE
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHR----------------HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI 155 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~----------------~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili 155 (289)
+..+++|+||+..|+|.+++...+ .++...+..++.||+.|++||++.. .+||||-..||++
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARNVLI 451 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhhEEe
Confidence 468999999999999999998755 4889999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccCCccccCCcccc--ccCC--CCCCCCCCccccc-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 022956 156 NGNIGQVKIGDLGFAAIVGRSHAA--HSII--GTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAK 229 (289)
Q Consensus 156 ~~~~~~~~l~d~g~~~~~~~~~~~--~~~~--~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~ 229 (289)
..+ ..+|++|||+++........ .... -...|||||.+.. .++.++||||+|+++||++| |..||++......
T Consensus 452 ~~~-~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 452 TKN-KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred cCC-CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 999 79999999999864332211 1111 3557999997665 49999999999999999999 9999998664555
Q ss_pred HHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 230 IYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
..+.+..+..... +..+++++.+++..||+ +|++||++.++.. +|..
T Consensus 531 l~~~l~~G~r~~~-P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~--~~~~ 578 (609)
T KOG0200|consen 531 LLEFLKEGNRMEQ-PEHCSDEIYDLMKSCWNADPEDRPTFSECVE--FFEK 578 (609)
T ss_pred HHHHHhcCCCCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH--HHHH
Confidence 5667777766554 44559999999999998 9999999999988 6554
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=221.71 Aligned_cols=213 Identities=27% Similarity=0.424 Sum_probs=180.7
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCeeEEEec
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
.+-||.|++|.|-+.++..+|...|+|.++.+- +...++++..|+.+..+. ..|.+|.+++.++.+ ..+++.||
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--gdvwIcME 125 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--GDVWICME 125 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--ccEEEeHH
Confidence 466999999999999999999999999998664 345577788888887555 679999999988776 46999999
Q ss_pred cccCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHhcC-CCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 101 VCTSGNLRTYR----KKHRHVSIKALKKWSKQVLEGLEYLHTH-EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 101 ~~~~~sL~~~~----~~~~~l~~~~~~~~~~ql~~~l~~lh~~-~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
.+.. ||..+- .++..+++.-+-+++..++.||.|||++ . ++|||+||+|||++.+ |+||+||||.+..+.+
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYD-GQVKICDFGISGYLVD 201 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccC-CcEEEcccccceeehh
Confidence 9976 886664 4578899999999999999999999987 6 9999999999999999 9999999999987766
Q ss_pred ccccccCCCCCCCCCCccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 176 SHAAHSIIGTPEYMAPELYEE-----DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 176 ~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
.-......|-..|+|||+... .|+.++||||||++++||.+++.||..+...-+...++...++|...
T Consensus 202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence 655555678889999997653 48889999999999999999999999987777777777766655443
No 392
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=243.90 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=193.3
Q ss_pred CCCCceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH--hCCCCceEE
Q 022956 5 DGEPFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLR--TLKNKYIIV 82 (289)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~--~l~~~~i~~ 82 (289)
+|-|+..+....|-.++.+.||+|.||.||+|.+. |+.||||++.... | +...+|.++.+ .|+|+||+.
T Consensus 199 SGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd----E---~SWfrEtEIYqTvmLRHENILg 269 (513)
T KOG2052|consen 199 SGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD----E---RSWFRETEIYQTVMLRHENILG 269 (513)
T ss_pred CCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc----h---hhhhhHHHHHHHHHhccchhhh
Confidence 34455556666666688899999999999999886 9999999997542 2 33344555554 459999999
Q ss_pred eeeeEEeCCC--CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcC------CCCceecCCCCCceE
Q 022956 83 CYSVWLDDQH--NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH------EPCIIHRDLNCSNIF 154 (289)
Q Consensus 83 ~~~~~~~~~~--~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~------~~~~~h~dl~~~nil 154 (289)
+++.-..+.+ ..+++|++|.+.|||.|++.. ..++.+..++++..+++||+|||.. .|.++|||||..|||
T Consensus 270 FIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL 348 (513)
T KOG2052|consen 270 FIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 348 (513)
T ss_pred hhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence 8876544332 378999999999999999998 6699999999999999999999953 446999999999999
Q ss_pred EeCCCCcEEEeccCCccccCCcc-----ccccCCCCCCCCCCcccccCCC-------CcchHHHHHHHHHHHHh----C-
Q 022956 155 INGNIGQVKIGDLGFAAIVGRSH-----AAHSIIGTPEYMAPELYEEDYT-------EMVDIYSFGLCLLEMVT----M- 217 (289)
Q Consensus 155 i~~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~-------~~~Di~slG~il~~l~t----g- 217 (289)
+..+ +...|+|+|+|....... .....+||.+|||||+++...+ ..+||||||.++||++. |
T Consensus 349 VKkn-~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~gg 427 (513)
T KOG2052|consen 349 VKKN-GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGG 427 (513)
T ss_pred EccC-CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999 999999999997765432 2456789999999998875422 26999999999999865 2
Q ss_pred -----CCCCCCC----CcHHHHHHH-HhCCCCCCCCCCC-CCh---HHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 218 -----EIPYSEC----DSVAKIYKK-VTGGVKPQALNKV-KDP---EVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 218 -----~~p~~~~----~~~~~~~~~-~~~~~~~~~~~~~-~~~---~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+.||.+. .+.+++... +.+...|...... ..+ .+..+++.||. +|..|.++-.|-+
T Consensus 428 i~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 428 IVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred EehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 3677532 223333322 2223333322222 233 45677889998 9999999876655
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.4e-33 Score=273.75 Aligned_cols=238 Identities=21% Similarity=0.331 Sum_probs=179.1
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEec
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 100 (289)
..+.||+|+||.||+|.++.+|..||+|.+..... ...+|++.+++++||||+++++++... ...++|||
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~lv~E 763 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSE--KGAYLIHE 763 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcC--CCCEEEEe
Confidence 35689999999999999999999999999864321 112357889999999999999998554 56899999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---cCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH---THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
|+++++|.+++.. +++..+..++.|++.|++||| +.+ ++|+|+||+||+++.+ +..++. ++.+.....
T Consensus 764 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiH~dlkp~Nil~~~~-~~~~~~-~~~~~~~~~-- 834 (968)
T PLN00113 764 YIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPA--VVVGNLSPEKIIIDGK-DEPHLR-LSLPGLLCT-- 834 (968)
T ss_pred CCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCC--eecCCCCHHhEEECCC-CceEEE-ecccccccc--
Confidence 9999999999964 889999999999999999999 556 9999999999999987 666665 554433211
Q ss_pred ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhCCC------CCCCCCC-
Q 022956 178 AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECD----SVAKIYKKVTGGV------KPQALNK- 245 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~------~~~~~~~- 245 (289)
.....+++.|+|||...+. ++.++||||||+++|||+||+.||.... ............. .+.....
T Consensus 835 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred -CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 1123567899999977654 8999999999999999999999985321 1111111111100 0100000
Q ss_pred ----CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 246 ----VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 246 ----~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
....++.+++.+||+ ||++||+++|+++ .++++
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~--~L~~~ 951 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLK--TLESA 951 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH--HHHHh
Confidence 112256788999998 9999999999998 45554
No 394
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-34 Score=253.93 Aligned_cols=242 Identities=26% Similarity=0.426 Sum_probs=200.2
Q ss_pred eeeeecccCcceEEEEeecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGI----EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
-.++||+|+||+||++.+...|+ +||+|++.... ......++.+|+-.+.+|+|||+++++++...+ .+.
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t---~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---~~q 773 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT---SPKASIELLDEALRMASLDHPNLLRLLGVCMLS---TLQ 773 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccC---CchhhHHHHHHHHHHhcCCCchHHHHhhhcccc---hHH
Confidence 36889999999999999876654 57778776543 344467888999999999999999999998654 489
Q ss_pred EEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 97 FITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
||++|+++|+|.++++.+ ..+.....+.|..||++||.|||.++ ++||||-..|||+..- +.+|++|||+++....
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP-~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSP-NHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCC-CeEEEEecchhhccCc
Confidence 999999999999999864 57899999999999999999999999 9999999999999877 6999999999998765
Q ss_pred ccccccC---CCCCCCCCCcccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChH
Q 022956 176 SHAAHSI---IGTPEYMAPELYE-EDYTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPE 250 (289)
Q Consensus 176 ~~~~~~~---~~~~~~~aPE~~~-~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (289)
....... .-.+.|+|-|... +.++.++||||+|+++||++| |..|+.+. +.+++-..+..+.+ -.-+...+-.
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi-~~~eI~dlle~geR-LsqPpiCtiD 928 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI-PAEEIPDLLEKGER-LSQPPICTID 928 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC-CHHHhhHHHhcccc-CCCCCCccHH
Confidence 4443332 2356888888555 559999999999999999999 99999874 44455555555544 3335556889
Q ss_pred HHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 251 VKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 251 ~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
+..++.+||- |++.||+++++..
T Consensus 929 Vy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 929 VYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHHhccCcccCccHHHHHH
Confidence 9999999997 9999999998865
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-33 Score=236.20 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=183.4
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH--hCCCCceEEeeeeEEeCC--CCee
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLR--TLKNKYIIVCYSVWLDDQ--HNTL 95 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~--~l~~~~i~~~~~~~~~~~--~~~~ 95 (289)
++.+.||+|+||.||+|+.. ++.||||++.. ...+.+.+|-.+.+ .|+|+||+++++.-.... ...+
T Consensus 213 ~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhHHHhhcCccceeehhhcc--CceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 56789999999999999765 79999999973 33556666665554 558999999987643211 2368
Q ss_pred EEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCceecCCCCCceEEeCCCCcEEEeccC
Q 022956 96 NFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE-------PCIIHRDLNCSNIFINGNIGQVKIGDLG 168 (289)
Q Consensus 96 ~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~-------~~~~h~dl~~~nili~~~~~~~~l~d~g 168 (289)
++|++|.+.|||.+++..+- +++....+++..++.||+|||+.- ++|+|||||..|||+..| ++..|+|||
T Consensus 284 wLVt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFG 361 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND-LTCCIADFG 361 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC-CcEEeeccc
Confidence 99999999999999999754 899999999999999999999743 369999999999999999 899999999
Q ss_pred CccccCCcc---ccccCCCCCCCCCCcccccCC--C-----CcchHHHHHHHHHHHHhCCC------------CCC----
Q 022956 169 FAAIVGRSH---AAHSIIGTPEYMAPELYEEDY--T-----EMVDIYSFGLCLLEMVTMEI------------PYS---- 222 (289)
Q Consensus 169 ~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~--~-----~~~Di~slG~il~~l~tg~~------------p~~---- 222 (289)
+|..+.... ......||.+|||||.+.+.. . .+.||||+|.++|||++... ||.
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 998775332 234478999999999988752 2 25899999999999998532 221
Q ss_pred CCCcHHHHHHHHhCC-CCCCC---C-CCCCChHHHHHHHHHHc-CCCCCCCHHHH
Q 022956 223 ECDSVAKIYKKVTGG-VKPQA---L-NKVKDPEVKAFIEKCIA-QPRARPSASEL 271 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~-~~~~~---~-~~~~~~~~~~li~~~l~-dp~~Rps~~~i 271 (289)
.....++++..+.+. .+|.. + .......+++.++.||. |++.|.|+.=+
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 122334444443332 22221 1 22234568999999998 99999998533
No 396
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=6.1e-34 Score=238.28 Aligned_cols=254 Identities=23% Similarity=0.390 Sum_probs=201.1
Q ss_pred CcccceeeeecccCcceEEEEeecC---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCC
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAFDQE---EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQ 91 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 91 (289)
..+++...+||+|.|++||++.+.. .+..||+|.+..... ..++.+|+++|..+. +.||+++.+.+...
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------p~ri~~El~~L~~~gG~~ni~~~~~~~rnn- 107 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------PSRILNELEMLYRLGGSDNIIKLNGCFRNN- 107 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC------chHHHHHHHHHHHhccchhhhcchhhhccC-
Confidence 3455789999999999999999887 788999999987654 467889999999994 78999999888444
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
+.+.+|+||++...-.++... ++..++.+.++.++.||.++|.+| ++|+|+||+|++++...+.-.|+|||++.
T Consensus 108 -d~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 108 -DQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred -CeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHH
Confidence 679999999999888888776 778999999999999999999999 99999999999999998999999999997
Q ss_pred ccCC--------c-------c------------------------------ccccCCCCCCCCCCccccc--CCCCcchH
Q 022956 172 IVGR--------S-------H------------------------------AAHSIIGTPEYMAPELYEE--DYTEMVDI 204 (289)
Q Consensus 172 ~~~~--------~-------~------------------------------~~~~~~~~~~~~aPE~~~~--~~~~~~Di 204 (289)
.... . . ...+..||++|.|||++.+ ..+++.||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 2100 0 0 0012468999999997653 38889999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcHHH-HH--------------------------------------------HHHhCCC-
Q 022956 205 YSFGLCLLEMVTMEIPYSECDSVAK-IY--------------------------------------------KKVTGGV- 238 (289)
Q Consensus 205 ~slG~il~~l~tg~~p~~~~~~~~~-~~--------------------------------------------~~~~~~~- 238 (289)
||-|+|+..++++..||-...+... .. ..+....
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999953111100 00 0000000
Q ss_pred ---CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCC
Q 022956 239 ---KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELND 282 (289)
Q Consensus 239 ---~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~ 282 (289)
......+..+..+.+|+.+||. ||.+|+|+++.|+||||...+.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 0112233345688999999999 9999999999999999997643
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=1.3e-31 Score=215.49 Aligned_cols=209 Identities=38% Similarity=0.675 Sum_probs=183.0
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccC
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTS 104 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 104 (289)
||+|.+|.||++.+..+|+.+++|++....... ..+.+.+|++.++.+.|++++++++.+... ...++++|++.|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCC
Confidence 689999999999998889999999998654321 357789999999999999999999988554 678999999998
Q ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC-CCCcEEEeccCCccccCCcc-cccc
Q 022956 105 GNLRTYRKKH-RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING-NIGQVKIGDLGFAAIVGRSH-AAHS 181 (289)
Q Consensus 105 ~sL~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~-~~~~~~l~d~g~~~~~~~~~-~~~~ 181 (289)
++|.+++... ..++...+..++.+++.++.+||+.| ++|+||+|.||+++. + +.++|+|||.+....... ....
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~-~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDN-GKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCC-CcEEEecCCceEEccCCcchhhc
Confidence 9999999875 57899999999999999999999999 999999999999998 6 799999999998765443 2233
Q ss_pred CCCCCCCCCCccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 182 IIGTPEYMAPELYEE--DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 182 ~~~~~~~~aPE~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
..+...|++||.... .++.++|+|+||++++++ ..+.+++..|+
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------~~~~~~l~~~l 198 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------PELKDLIRKML 198 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------HHHHHHHHHHh
Confidence 457789999997765 578899999999999999 78899999999
Q ss_pred c-CCCCCCCHHHHhcCc
Q 022956 260 A-QPRARPSASELLKDP 275 (289)
Q Consensus 260 ~-dp~~Rps~~~il~h~ 275 (289)
. +|++||+++++++|+
T Consensus 199 ~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 199 QKDPEKRPSAKEILEHL 215 (215)
T ss_pred hCCcccCcCHHHHhhCC
Confidence 8 999999999999875
No 398
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-34 Score=226.84 Aligned_cols=253 Identities=25% Similarity=0.400 Sum_probs=198.1
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC---CeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH---NTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~lv~ 99 (289)
+-||-|+||.||.+.+..+|+.+|+|++..... +-...+++.+|+++|...+|.|++..++......- ..+|.++
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq--~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ--NLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHH--HHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 559999999999999999999999999975432 45557889999999999999999988776532211 1257788
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
|.+.. .|...+..-..++.+.+.-+++||+.||.|||+.+ +.|+||||.|.+++.| -.+||||||+++........
T Consensus 137 ELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSN-CvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSN-CILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccC-ceEEecccccccccchhhhh
Confidence 88866 88888888888999999999999999999999999 9999999999999999 79999999999877543322
Q ss_pred --ccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH-----------------------
Q 022956 180 --HSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYK----------------------- 232 (289)
Q Consensus 180 --~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~----------------------- 232 (289)
....-|.-|.|||++-+. |+.+.||||.|||+.|++..+..|....+..++.-
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 222456789999987654 99999999999999999999888875444433221
Q ss_pred HHhCCCCCCCCCC--------CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 233 KVTGGVKPQALNK--------VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 233 ~~~~~~~~~~~~~--------~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
.+.+...+...+. ....+...++..++. ||++|.+.++.+.|+++.+..
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 1111111111111 112355677888888 999999999999999988764
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-34 Score=248.96 Aligned_cols=259 Identities=27% Similarity=0.505 Sum_probs=223.3
Q ss_pred eeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC
Q 022956 11 EVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD 90 (289)
Q Consensus 11 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 90 (289)
.-++-+.|+ +...+|+|.||.||+++++.+++..|+|+++.... +....+.+|+-+++..+||||+..++.|...
T Consensus 10 rrnP~ddye-llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~iqqei~~~~dc~h~nivay~gsylr~ 84 (829)
T KOG0576|consen 10 RRNPQDDYE-LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR 84 (829)
T ss_pred hcCCccchh-heeeecCCcccchhhhcccccCchhhheeeeccCC----ccccccccceeeeecCCCcChHHHHhhhhhh
Confidence 337888885 78999999999999999999999999999997643 3366778899999999999999999999665
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
..++++||||.|++|.+.-.--+++++.++..+.+..+.++.|||+.| -+|||||-.||++++. |.+|++|||.+
T Consensus 85 --dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~-gDvklaDfgvs 159 (829)
T KOG0576|consen 85 --DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDE-GDVKLADFGVS 159 (829)
T ss_pred --cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeeccc-CceeecccCch
Confidence 469999999999999998777788999999999999999999999999 8999999999999999 99999999999
Q ss_pred cccCC-ccccccCCCCCCCCCCccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCC
Q 022956 171 AIVGR-SHAAHSIIGTPEYMAPELY----EEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNK 245 (289)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~~~aPE~~----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
..+.. -.+..+..|++.|+|||.- .+.|+...|+|++|++..++-.-+.|-....+.....-.-.+++.+....+
T Consensus 160 aqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkD 239 (829)
T KOG0576|consen 160 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKD 239 (829)
T ss_pred hhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccC
Confidence 77653 3345677899999999942 355999999999999999998888887777777766666666665554433
Q ss_pred --CCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 246 --VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 246 --~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
.-++.+..|++.+|. +|++||+++.+|.|||...
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 347789999999997 9999999999999999865
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2e-30 Score=211.38 Aligned_cols=212 Identities=33% Similarity=0.520 Sum_probs=180.7
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
++.+.||+|++|+||++.+..+++.+++|.+...... ...+.+.+|++.++.++|+|++++++.+... ...++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~ 76 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLYLVM 76 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceEEEE
Confidence 5688999999999999999988999999999865432 2467889999999999999999999887544 5789999
Q ss_pred ccccCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc-
Q 022956 100 EVCTSGNLRTYRKKHRH-VSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH- 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~-l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~- 177 (289)
|++++++|.+++..... +++..+..++.+++.++.+||+.+ ++|+|++|.||+++.+ +.++|+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMD-GLVKLADFGLARFIHRDLA 153 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeeCceeeEecCccc
Confidence 99999999999987666 899999999999999999999999 9999999999999998 899999999998775543
Q ss_pred -ccccCCCCCCCCCCccc-cc-CCCCcchHHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHhCCCC
Q 022956 178 -AAHSIIGTPEYMAPELY-EE-DYTEMVDIYSFGLCLLEMVTMEIPYSE-CDSVAKIYKKVTGGVK 239 (289)
Q Consensus 178 -~~~~~~~~~~~~aPE~~-~~-~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~ 239 (289)
......++..|++||.. .. .++.++|+|+||+++++|++|+.||.. ..+.....+.+..+.+
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 219 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVP 219 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCc
Confidence 33445677889999976 33 377799999999999999999999977 4555566666666543
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-32 Score=235.08 Aligned_cols=197 Identities=28% Similarity=0.390 Sum_probs=167.6
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHH----HHHHHHHHHHHHHhCC---CCceEEeeeeEEeCCCC
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPV----LVNRLHSEVQLLRTLK---NKYIIVCYSVWLDDQHN 93 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~----~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~ 93 (289)
..+.||+|+||.|++|.++++...|++|.+...+.-.+.= ..-.+--|+++|.+|+ |+||++++++|. +++
T Consensus 565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE--ddd 642 (772)
T KOG1152|consen 565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE--DDD 642 (772)
T ss_pred eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee--cCC
Confidence 4688999999999999999999999999998644311100 0112455899999997 999999999984 447
Q ss_pred eeEEEecccc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 94 TLNFITEVCT-SGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 94 ~~~lv~e~~~-~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
++|++||-.. |..|+++++-.+.+++.++..|++|++.|+++||+.| ++|||||-+||+++.+ |.+||+|||.+..
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~-g~~klidfgsaa~ 719 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSN-GFVKLIDFGSAAY 719 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecC-CeEEEeeccchhh
Confidence 8999999854 4589999999999999999999999999999999999 9999999999999999 9999999999875
Q ss_pred cCCccccccCCCCCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCC
Q 022956 173 VGRSHAAHSIIGTPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSE 223 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~ 223 (289)
.... .+....||..|.|||.+.|. ....-|||+||+++|.++....||-+
T Consensus 720 ~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 720 TKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 5443 56677899999999999876 56678999999999999998888753
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=211.45 Aligned_cols=258 Identities=21% Similarity=0.309 Sum_probs=192.5
Q ss_pred eeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEE
Q 022956 10 VEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWL 88 (289)
Q Consensus 10 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~ 88 (289)
-.++..+.| .+.+.||+|.||.+-++.|..++..+++|.+... ...++.|.+|.-.--.| .|.||+..+++.+
T Consensus 18 ~kv~l~d~y-~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 18 KKVDLEDVY-TINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-----QTTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred cccchhhhh-hHHHHhcccceeeEEeeeccCCceEEEeeccCcc-----hhhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 345667777 5789999999999999999999999999999854 33467888888776666 4789998888766
Q ss_pred eCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEE-eCCCCcEEEecc
Q 022956 89 DDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFI-NGNIGQVKIGDL 167 (289)
Q Consensus 89 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili-~~~~~~~~l~d~ 167 (289)
... +++++++||++-|+|..-+...+ +.+.....++.|+++|+.|||+++ ++|||||.+|||+ +++.-+||||||
T Consensus 92 qt~-d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 92 QTS-DAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred hcC-ceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeec
Confidence 654 58899999999999998887644 889999999999999999999999 9999999999998 566679999999
Q ss_pred CCccccCCccccccCCCCCCCCCCcccc---c-C--CCCcchHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHhCCC
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPELYE---E-D--YTEMVDIYSFGLCLLEMVTMEIPYSECDSV---AKIYKKVTGGV 238 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~~~---~-~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~ 238 (289)
|.....+..-.. .--...|.+||... . . ..+.+|+|.||+++|.++||..||...... -..+..-.+..
T Consensus 168 G~t~k~g~tV~~--~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 168 GLTRKVGTTVKY--LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred ccccccCceehh--hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 998765433221 11245788898432 2 2 678899999999999999999999742211 11122222221
Q ss_pred C--CCCCCCCCChHHHHHHHHHHc-CCCCC---CCHHHHhcCccccc
Q 022956 239 K--PQALNKVKDPEVKAFIEKCIA-QPRAR---PSASELLKDPFFSE 279 (289)
Q Consensus 239 ~--~~~~~~~~~~~~~~li~~~l~-dp~~R---ps~~~il~h~~~~~ 279 (289)
. .+......++.+..+.++-|. ++++| -++.......|...
T Consensus 246 ~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 246 NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred CccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 1 112223346777777888887 88888 34444444455443
No 403
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=3e-30 Score=214.42 Aligned_cols=245 Identities=27% Similarity=0.358 Sum_probs=194.5
Q ss_pred ceeeeecccCcceEEEEeecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEE-----GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
++...+-+|.||.||.|.+.+. .+.+-+|.++... ++-....+.+|.-.+..+.|||++++.++..++. .+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~-~~ 362 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY-AT 362 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc-Cc
Confidence 4556688999999999976544 2446677776432 4555677899999999999999999999887654 56
Q ss_pred eEEEeccccCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 95 LNFITEVCTSGNLRTYRKKH--------RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~--------~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
.+.++.+..-++|..++... +.++..+...++.|++.|+.|||++| ++|.||-..|.++|+. -++||+|
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~-LqVkltD 439 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQ-LQVKLTD 439 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhh-eeEEecc
Confidence 67788998889999999731 34667788899999999999999999 9999999999999999 7999999
Q ss_pred cCCccccC--Cccccc-cCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 167 LGFAAIVG--RSHAAH-SIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 167 ~g~~~~~~--~~~~~~-~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
=.+++..- +..-.. .--....||+||.+... ++.++|+||||+++|||+| |+.|+...++.+..- -+..+.+.
T Consensus 440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~-ylkdGyRl- 517 (563)
T KOG1024|consen 440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH-YLKDGYRL- 517 (563)
T ss_pred chhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH-HHhcccee-
Confidence 98886542 222111 22246799999976654 9999999999999999999 999999877665544 34444332
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
..+-.+|+++..++..||+ +|++||+++|+..
T Consensus 518 aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 518 AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 2345579999999999999 9999999999876
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=6e-29 Score=195.70 Aligned_cols=160 Identities=25% Similarity=0.360 Sum_probs=126.3
Q ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccCC
Q 022956 105 GNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSII 183 (289)
Q Consensus 105 ~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 183 (289)
|+|.+++.. +.++++.++..++.|++.||.|||+.+ ||+||+++.+ +.+++ ||.+....... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~-~~~~~--fG~~~~~~~~~----~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWD-GLLKL--DGSVAFKTPEQ----SR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCc-cceee--ccceEeecccc----CC
Confidence 589999986 456999999999999999999999887 9999999988 88998 99987664432 25
Q ss_pred CCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCC-----CCCCCCh--HHHHHH
Q 022956 184 GTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQA-----LNKVKDP--EVKAFI 255 (289)
Q Consensus 184 ~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~li 255 (289)
+++.|+|||.+.+. +++++|||||||++|+|++|..||............+........ .....+. .+.+++
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 78999999977654 899999999999999999999999765443333333332222111 1111222 699999
Q ss_pred HHHHc-CCCCCCCHHHHhcCccccc
Q 022956 256 EKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 256 ~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
..||+ ||++||++.+++.|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHH
Confidence 99998 9999999999999999764
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=3e-29 Score=239.54 Aligned_cols=181 Identities=19% Similarity=0.230 Sum_probs=132.7
Q ss_pred CeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC-------------
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN------------- 158 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~------------- 158 (289)
..+++++|++.+ +|.+++.. ...+++.++..++.||+.||.|||++| ++|+||||+|||++..
T Consensus 53 ~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvHrDlKP~NiLl~~~~~~k~~d~~~~~~ 129 (793)
T PLN00181 53 DSIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSD 129 (793)
T ss_pred chhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eeeccCCchhEEEcccCcEEEeeccccCc
Confidence 457788998844 99999975 456999999999999999999999999 9999999999999643
Q ss_pred -----CCcEEEeccCCccccCCcc-----------------ccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHH
Q 022956 159 -----IGQVKIGDLGFAAIVGRSH-----------------AAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMV 215 (289)
Q Consensus 159 -----~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~ 215 (289)
.+.+|++|||++....... ......+++.|+|||.+.+ .++.++|||||||++|||+
T Consensus 130 ~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 130 SGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 1456666666664321100 0011346888999997654 4899999999999999999
Q ss_pred hCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 216 TMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 216 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
+|..|+.... .....+.....+... ....+...+++..||+ ||.+||++.++++||||.+.
T Consensus 210 ~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 210 CPVSSREEKS---RTMSSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred hCCCchhhHH---HHHHHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 9888765321 111112111111111 1124566788999998 99999999999999999864
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-27 Score=191.71 Aligned_cols=200 Identities=19% Similarity=0.268 Sum_probs=167.7
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQH 92 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~ 92 (289)
..+--|+++++||+|+||.++.+++.-++++||||....... ...+..|....+.|.+ ++|+..+.+ .+++
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~------APQLrdEYr~YKlL~g~~GIP~vYYF--GqeG 96 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE------APQLRDEYRTYKLLGGTEGIPQVYYF--GQEG 96 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCC------cchHHHHHHHHHHHcCCCCCCceeee--cccc
Confidence 344445899999999999999999999999999999875432 4567778888888864 888877743 4666
Q ss_pred CeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe----CCCCcEEEecc
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN----GNIGQVKIGDL 167 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~----~~~~~~~l~d~ 167 (289)
.+-.+|+|++ |.||+|+++- ++.++...+..++.|++.-++++|++. ++.|||||+|+||. .+-+.+.++||
T Consensus 97 ~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 97 KYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred chhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEec
Confidence 7788899999 6699999984 678999999999999999999999999 99999999999993 23357999999
Q ss_pred CCccccCCcc--------ccccCCCCCCCCCCcc-cccCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 022956 168 GFAAIVGRSH--------AAHSIIGTPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVTMEIPYSEC 224 (289)
Q Consensus 168 g~~~~~~~~~--------~~~~~~~~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~~ 224 (289)
|+|+.+-++. ...+..||.+||+--. +.++.+.+.|+-|||.++++.+.|.+||.+.
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 9998875432 2345678999998774 4556999999999999999999999999874
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-27 Score=185.40 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=183.8
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQH 92 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~ 92 (289)
..++| ++.++||+|+||.+|.+....+|+.||||+...... ...+.-|.++.+.|++ ..|+.+..+. .+.
T Consensus 13 v~gky-~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------hpqL~yEskvY~iL~~g~GiP~i~~y~--~e~ 83 (341)
T KOG1163|consen 13 VGGKY-KLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------HPQLLYESKVYRILQGGVGIPHIRHYG--TEK 83 (341)
T ss_pred eccce-EEEEeecCCchhheeeeeeccCCceEEEEeecccCC------CcchhHHHHHHHHhccCCCCchhhhhc--ccc
Confidence 45666 899999999999999999999999999999875432 3456668888888876 5666655443 344
Q ss_pred CeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC--CCcEEEeccCC
Q 022956 93 NTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN--IGQVKIGDLGF 169 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~--~~~~~l~d~g~ 169 (289)
.+-.+|||.+ |.||++++.- ++.++...++.++-|++.-++|+|.++ ++|+||||+|+++.-+ .+.+.|+|||+
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccc
Confidence 6778899999 6699999874 577999999999999999999999999 9999999999999543 25899999999
Q ss_pred ccccCCc--------cccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH--HHHHhC--
Q 022956 170 AAIVGRS--------HAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI--YKKVTG-- 236 (289)
Q Consensus 170 ~~~~~~~--------~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~--~~~~~~-- 236 (289)
+..+-+. .......||.+|.+--..-+ ..+.+.|+-|+|.++.++-.|.+||.+.....+. ++.+..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK 240 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh
Confidence 9876432 22344578889987664443 4788999999999999999999999875433222 222221
Q ss_pred -CCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCH
Q 022956 237 -GVKPQALNKVKDPEVKAFIEKCIA-QPRARPSA 268 (289)
Q Consensus 237 -~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~ 268 (289)
..+........|.++.-.+..|=. --++-|+.
T Consensus 241 ~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 241 MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 223334444556777777777755 55555554
No 408
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.7e-28 Score=224.07 Aligned_cols=261 Identities=23% Similarity=0.364 Sum_probs=203.6
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeec--ccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLS--HFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
..+|.+-.+.+|.|++|.|+.+......+.++.|.+... ...........+..|+-+-.+++|++++..+..+.+..
T Consensus 316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~- 394 (601)
T KOG0590|consen 316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID- 394 (601)
T ss_pred ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-
Confidence 466777789999999998888887777777777766532 22223333444778888889999999988776664432
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
...-.||||++ .|+.++.....++..++-.++.|++.|+.|+|+.| +.|+|+|++|++++.+ |.+|++|||.+..
T Consensus 395 -~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~-g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 395 -GILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTEN-GILKIIDFGAASV 469 (601)
T ss_pred -cchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecC-CceEEeecCccee
Confidence 22234999999 99999998778999999999999999999999999 9999999999999999 9999999999976
Q ss_pred cCCcc-----ccccCCCCCCCCCCcccccC-CCCc-chHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhC-C-----CC
Q 022956 173 VGRSH-----AAHSIIGTPEYMAPELYEED-YTEM-VDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTG-G-----VK 239 (289)
Q Consensus 173 ~~~~~-----~~~~~~~~~~~~aPE~~~~~-~~~~-~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~-----~~ 239 (289)
...+. .....+|+..|+|||.+.+. +.++ .||||.|+++..|.+|+.||......+..+..... . ..
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG 549 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence 64332 23456789999999977755 7775 89999999999999999999865444332111111 1 11
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCC
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELN 281 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~ 281 (289)
+..+....+...+.+|..||+ ||.+|.++++|++.+||+.+.
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 122333457788999999999 999999999999999999875
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=6.6e-26 Score=194.97 Aligned_cols=247 Identities=20% Similarity=0.225 Sum_probs=187.1
Q ss_pred cccceeeeecccCcceEEEEeecCCC-cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC----CceEEeeeeEEeCC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEG-IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN----KYIIVCYSVWLDDQ 91 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~----~~i~~~~~~~~~~~ 91 (289)
+| ++.++||+|+||.||.|.+..++ ..+|+|.......... ..+..|..++..+.. ++++.++.... ..
T Consensus 19 ~~-~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~----~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~ 92 (322)
T KOG1164|consen 19 RY-KLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP----SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-ST 92 (322)
T ss_pred ce-EEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC----ccchhHHHHHHHHhhhcCCCCCCEEEEecc-CC
Confidence 44 78999999999999999988775 6789998876532211 156668888888863 67888887764 33
Q ss_pred CCeeEEEeccccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC----CcEEEe
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI----GQVKIG 165 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~----~~~~l~ 165 (289)
..+-++||+.+ |.+|.++.... +.++...++.++.|++.+|++||+.| ++||||||+|+.+.... ..+++.
T Consensus 93 ~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 93 EDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred CceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEE
Confidence 46789999999 66999998653 57999999999999999999999999 99999999999997652 469999
Q ss_pred ccCCccccC--Ccc--------c-cccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH---H
Q 022956 166 DLGFAAIVG--RSH--------A-AHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAK---I 230 (289)
Q Consensus 166 d~g~~~~~~--~~~--------~-~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~---~ 230 (289)
|||++.... ... . .....||.+|+++....+. .+++.|+||++.++.++..|.+||........ .
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998321 111 1 1234589999999976654 99999999999999999999999976543222 2
Q ss_pred HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 231 YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
.+......... .....+..+.++...+-. +...+|....+..
T Consensus 250 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 250 EKDPRKLLTDR-FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHHhhhhcccc-ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 22111111111 234456778887777777 9999999988765
No 410
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=219.44 Aligned_cols=243 Identities=21% Similarity=0.246 Sum_probs=181.7
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+-+++.||.+.|=+|.++++. .|. |+||++-...-.-.-....+..++++ ...+++||.+++..+-... +..|+|
T Consensus 25 ~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~--kAAylv 99 (1431)
T KOG1240|consen 25 CHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD--KAAYLV 99 (1431)
T ss_pred eeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh--HHHHHH
Confidence 357899999999999999875 344 89999876542112222333334455 6777999999988765333 567889
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCC--c
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR--S 176 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~--~ 176 (289)
-+|+.. +|.|.+..++.+..-+..+++.|++.||.-+|..| ++|||||.+|||++.- +++.|+||...+...- .
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSW-NW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSW-NWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeee-chhhhhcccccCCccCCCC
Confidence 999977 99999999999999999999999999999999999 9999999999999999 8999999987754321 1
Q ss_pred cc------cccCCCCCCCCCCccccc-----------C-CCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhCC
Q 022956 177 HA------AHSIIGTPEYMAPELYEE-----------D-YTEMVDIYSFGLCLLEMVT-MEIPYSECDSVAKIYKKVTGG 237 (289)
Q Consensus 177 ~~------~~~~~~~~~~~aPE~~~~-----------~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~ 237 (289)
+. +.+.....+|.|||.+.. . .+++.||||+||+++|+++ |..||.- .+...+. ..+
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-SQL~aYr---~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-SQLLAYR---SGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-HHHHhHh---ccC
Confidence 11 123345679999997642 1 5789999999999999988 6777741 1111111 111
Q ss_pred C--CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 238 V--KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 238 ~--~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
. +...+....+..++.|+..|++ ||++|.++++.|+.
T Consensus 252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 0111222345689999999999 99999999999984
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=7.3e-24 Score=181.63 Aligned_cols=256 Identities=29% Similarity=0.403 Sum_probs=205.3
Q ss_pred cceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCC-ceEEeeeeEEeCCCCeeEE
Q 022956 19 GRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK-YIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 19 ~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~~l 97 (289)
+++.+.||.|+|+.||++.+. ..+++|.+....... ......+.+|+..+..+.|+ +++.+...+... ...++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESK-SKEVERFLREIQILASLNHPPNIVKLYDFFQDE--GSLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccc-hhHHHHHHHHHHHHHHccCCcceeeEEEEEecC--CEEEE
Confidence 367899999999999999876 889999998765422 23567889999999999988 799999888333 45799
Q ss_pred EeccccCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCC-cEEEeccCCcccc
Q 022956 98 ITEVCTSGNLRTYRKKHR---HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIV 173 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~-~~~l~d~g~~~~~ 173 (289)
+++++.++++.+++.... .++......++.|++.++.++|+.+ ++|+|++|+||+++.. + .++++|||.+...
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~-~~~~~l~dfg~~~~~ 152 (384)
T COG0515 76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRD-GRVVKLIDFGLAKLL 152 (384)
T ss_pred EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCC-CCeEEEeccCcceec
Confidence 999999999998777664 7999999999999999999999999 9999999999999988 5 7999999999755
Q ss_pred CCcc-------ccccCCCCCCCCCCccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHhCCCC
Q 022956 174 GRSH-------AAHSIIGTPEYMAPELYEE----DYTEMVDIYSFGLCLLEMVTMEIPYSECDS---VAKIYKKVTGGVK 239 (289)
Q Consensus 174 ~~~~-------~~~~~~~~~~~~aPE~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~ 239 (289)
.... ......++..|++||...+ ......|+|++|++++++++|..||..... .......+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 4332 2355678999999997664 588899999999999999999999876553 4455555444443
Q ss_pred C-CCCCCCC------ChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 240 P-QALNKVK------DPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 240 ~-~~~~~~~------~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
+ ....... ...+.+++..++. +|..|.+..+...+++.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 284 (384)
T COG0515 233 PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLK 284 (384)
T ss_pred cccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcccc
Confidence 3 1111111 2578999999998 99999999999988666655433
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=4e-25 Score=190.33 Aligned_cols=172 Identities=15% Similarity=0.144 Sum_probs=128.6
Q ss_pred ceeeCCCCcccceeeeecccCcceEEEEeecC-CCcEEEEEEeeeccc-CCCHHHHHHHHHHHHHHHhCCCCceEEeeee
Q 022956 9 FVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQE-EGIEVAWNQVRLSHF-SEDPVLVNRLHSEVQLLRTLKNKYIIVCYSV 86 (289)
Q Consensus 9 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 86 (289)
..++.+....|++.+.||+|+||+||+|.++. ++..+|||++..... .......+.+.+|++++++++|+++++.+..
T Consensus 10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~ 89 (365)
T PRK09188 10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA 89 (365)
T ss_pred ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence 33443333334789999999999999998876 677789998753211 0123446779999999999999999854432
Q ss_pred EEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCC-CCCceEEeCCCCcEEEe
Q 022956 87 WLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDL-NCSNIFINGNIGQVKIG 165 (289)
Q Consensus 87 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl-~~~nili~~~~~~~~l~ 165 (289)
+ ...++||||++|++|... .. .. ...++.|++.+|.+||++| ++|+|| ||+||+++.+ +.++|+
T Consensus 90 ~-----~~~~LVmE~~~G~~L~~~-~~---~~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~-~~ikLi 154 (365)
T PRK09188 90 T-----GKDGLVRGWTEGVPLHLA-RP---HG---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPD-GEAAVI 154 (365)
T ss_pred c-----CCcEEEEEccCCCCHHHh-Cc---cc---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCC-CCEEEE
Confidence 2 247899999999999732 11 11 1467899999999999999 999999 9999999877 899999
Q ss_pred ccCCccccCCcccc---------ccCCCCCCCCCCcccc
Q 022956 166 DLGFAAIVGRSHAA---------HSIIGTPEYMAPELYE 195 (289)
Q Consensus 166 d~g~~~~~~~~~~~---------~~~~~~~~~~aPE~~~ 195 (289)
|||++......... ....+++.|.+||.+.
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 99999876433211 1235677889999775
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.93 E-value=3.5e-26 Score=189.07 Aligned_cols=232 Identities=17% Similarity=0.208 Sum_probs=151.8
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC----------CceEEeeeeEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN----------KYIIVCYSVWLD 89 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~----------~~i~~~~~~~~~ 89 (289)
+.++.||.|+++.||.+.+.+||+.+|+|++..... .....++.+++|.-....+.+ -.++..++....
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~-~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD-ASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST-THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccc-cchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 456889999999999999999999999999988763 234457777777655544322 123333332221
Q ss_pred ---------CC-CC-----eeEEEeccccCCcHHHHHHh---cC----CCCHHHHHHHHHHHHHHHHHHhcCCCCceecC
Q 022956 90 ---------DQ-HN-----TLNFITEVCTSGNLRTYRKK---HR----HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRD 147 (289)
Q Consensus 90 ---------~~-~~-----~~~lv~e~~~~~sL~~~~~~---~~----~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~d 147 (289)
.. .. ..+++|+-..+ +|.+++.. .. .+.....+.+..|++..+++||..| ++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHgd 170 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--LVHGD 170 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEST
T ss_pred cCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc--eEecc
Confidence 11 11 13567787755 88887642 21 1333455667799999999999999 99999
Q ss_pred CCCCceEEeCCCCcEEEeccCCccccCCccccccCCCCCCCCCCccccc---------CCCCcchHHHHHHHHHHHHhCC
Q 022956 148 LNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEE---------DYTEMVDIYSFGLCLLEMVTME 218 (289)
Q Consensus 148 l~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~---------~~~~~~Di~slG~il~~l~tg~ 218 (289)
|+|+|++++.+ |.++|+||+.....+..... ...+..|.|||.... .++.+.|.|+||+++|.|+++.
T Consensus 171 i~~~nfll~~~-G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 171 IKPENFLLDQD-GGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp -SGGGEEE-TT-S-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred cceeeEEEcCC-CCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 99999999999 99999999888766554332 334577889995432 2788999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCC
Q 022956 219 IPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRAR 265 (289)
Q Consensus 219 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~R 265 (289)
.||+.......... ...... ..|+.+++||..+|+ +|.+|
T Consensus 248 lPf~~~~~~~~~~~------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99985322211100 111222 578999999999999 99987
No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.9e-26 Score=200.66 Aligned_cols=242 Identities=20% Similarity=0.327 Sum_probs=200.0
Q ss_pred eecccCcceEEEEee---cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCCCeeEEEe
Q 022956 24 LLGSGAVKKVYRAFD---QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+|+|+||.|+++.. ...|.-||+|+.+.......... ....|-.++...+ ||.++.+...+..+ ...+++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~--~kl~l~l 76 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTD--GKLYLIL 76 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeeccc--cchhHhh
Confidence 379999999998742 33477899999887665332222 5556777888886 89999998877544 5788999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAA 179 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~ 179 (289)
++..|+.|...+.+.....+.........++-++.++|+.+ ++|+|+|++||+++.+ |.+++.|||++...-.....
T Consensus 77 d~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~-Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLE-GHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred hhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeeccc-CccccCCchhhhHhHhhhhc
Confidence 99999999999999888999999999999999999999999 9999999999999999 99999999999876554443
Q ss_pred ccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHH
Q 022956 180 HSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCI 259 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 259 (289)
||+..|+|||+.. ....++|.||+|+++++|+||..||.. +....+.... ...+...+..+++++..++
T Consensus 154 ---cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~---~~~p~~l~~~a~~~~~~l~ 222 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAE---LEMPRELSAEARSLFRQLF 222 (612)
T ss_pred ---ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhc---cCCchhhhHHHHHHHHHHH
Confidence 8999999999887 668889999999999999999999987 3333333222 2245556788999999999
Q ss_pred c-CCCCCC-----CHHHHhcCcccccCCCC
Q 022956 260 A-QPRARP-----SASELLKDPFFSELNDD 283 (289)
Q Consensus 260 ~-dp~~Rp-----s~~~il~h~~~~~~~~~ 283 (289)
. +|.+|. ...++++|+||..++|+
T Consensus 223 ~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 223 KRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred hhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 8 999995 45899999999999998
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-24 Score=171.61 Aligned_cols=241 Identities=17% Similarity=0.283 Sum_probs=191.5
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.+.-+|.+.-.|..|+++++ |..++.|++..... .....+.|.+|.-.|+-..||||+++++.+-.. ..+.++.
T Consensus 193 nl~tkl~e~hsgelwrgrwq--gndivakil~vr~~--t~risrdfneefp~lrifshpnilpvlgacnsp--pnlv~is 266 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ--GNDIVAKILNVREV--TARISRDFNEEFPALRIFSHPNILPVLGACNSP--PNLVIIS 266 (448)
T ss_pred hhhhhhccCCCccccccccc--Ccchhhhhhhhhhc--chhhcchhhhhCcceeeecCCchhhhhhhccCC--CCceEee
Confidence 35577899999999999987 66888899887665 455567799999999999999999999988444 4688899
Q ss_pred ccccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCcc
Q 022956 100 EVCTSGNLRTYRKKHR--HVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSH 177 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~ 177 (289)
.|++-+||.+.+...- -.+..++.+++..++.|++|||+..+-+--..|+...|++|++ .+.+|..-+....+...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmided-ltarismad~kfsfqe~- 344 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED-LTARISMADTKFSFQEV- 344 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch-hhhheecccceeeeecc-
Confidence 9999999999997643 3567899999999999999999998755667899999999988 56665533222212111
Q ss_pred ccccCCCCCCCCCCcccccC----CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHH
Q 022956 178 AAHSIIGTPEYMAPELYEED----YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKA 253 (289)
Q Consensus 178 ~~~~~~~~~~~~aPE~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
...-.|.|++||.+.+. .-.++|+|||++++||+.|...||.+..+.+--..+-..+..... +...+..+..
T Consensus 345 ---gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~i-ppgis~hm~k 420 (448)
T KOG0195|consen 345 ---GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHI-PPGISRHMNK 420 (448)
T ss_pred ---ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccC-CCCccHHHHH
Confidence 23457899999977643 345799999999999999999999998887776666666655443 4557889999
Q ss_pred HHHHHHc-CCCCCCCHHHHh
Q 022956 254 FIEKCIA-QPRARPSASELL 272 (289)
Q Consensus 254 li~~~l~-dp~~Rps~~~il 272 (289)
|+.-|++ ||.+||.++.|+
T Consensus 421 lm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 421 LMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHhcCCCCcCCCcceeh
Confidence 9999998 999999998775
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=2e-23 Score=165.65 Aligned_cols=145 Identities=19% Similarity=0.191 Sum_probs=113.0
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHH----------------------HHHHHHHHHHHHHhCCCCc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPV----------------------LVNRLHSEVQLLRTLKNKY 79 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~----------------------~~~~~~~e~~~l~~l~~~~ 79 (289)
...||+|++|.||+|.+. +|+.||+|+++......... .......|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999987 89999999998653211110 1123456999999998877
Q ss_pred eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hcCCCCceecCCCCCceEEeCC
Q 022956 80 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYL-HTHEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 80 i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~l-h~~~~~~~h~dl~~~nili~~~ 158 (289)
+........ . ..++||||++|+++.........++...+..++.|++.+|.++ |+.| ++|+||||+||+++.
T Consensus 81 v~~p~~~~~-~---~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~~- 153 (190)
T cd05147 81 IPCPEPILL-K---SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYHD- 153 (190)
T ss_pred CCCCcEEEe-c---CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEEC-
Confidence 643332221 1 1379999999987766544456799999999999999999999 7999 999999999999984
Q ss_pred CCcEEEeccCCccccCC
Q 022956 159 IGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~~~ 175 (289)
+.++|+|||++.....
T Consensus 154 -~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 154 -GKLYIIDVSQSVEHDH 169 (190)
T ss_pred -CcEEEEEccccccCCC
Confidence 6899999999976543
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=2.6e-23 Score=167.18 Aligned_cols=177 Identities=15% Similarity=0.119 Sum_probs=133.4
Q ss_pred CCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHH------HHHHHHHHHhCCCCceEEeeeeE
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNR------LHSEVQLLRTLKNKYIIVCYSVW 87 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~------~~~e~~~l~~l~~~~i~~~~~~~ 87 (289)
..++| +..+.||.|+||.||++.. ++..+|+|++..... ..+..... +.+|+..+.++.|+++..+...+
T Consensus 29 l~~~y-~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~-~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 29 LSYNI-KTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVK-RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred hhCce-EEEEEecCCCceEEEEEec--CCCcEEEEEechhcC-chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 45665 8899999999999999744 477899999975433 23444344 68999999999999999888776
Q ss_pred EeCC------CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCc
Q 022956 88 LDDQ------HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ 161 (289)
Q Consensus 88 ~~~~------~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~ 161 (289)
.... ....+++|||++|.+|.++.. +++ ....+++.++..+|+.| ++|+|++|+||+++++ |
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~-g- 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKN-G- 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCC-C-
Confidence 5432 235789999999999988742 333 24568999999999999 9999999999999988 7
Q ss_pred EEEeccCCccccCCccccccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHh
Q 022956 162 VKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVT 216 (289)
Q Consensus 162 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~t 216 (289)
++|+|||............. + .+...+..++|+|+||+++.....
T Consensus 173 i~liDfg~~~~~~e~~a~d~------~----vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAKDR------I----DLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEEECCCcccccchhhHHH------H----HHHhHhcccccccceeEeehHHHH
Confidence 99999998765432211100 0 122335678999999999877653
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=2.7e-22 Score=159.64 Aligned_cols=145 Identities=21% Similarity=0.229 Sum_probs=113.1
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCC--------------------C--HHHHHHHHHHHHHHHhCCCCc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE--------------------D--PVLVNRLHSEVQLLRTLKNKY 79 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~--~~~~~~~~~e~~~l~~l~~~~ 79 (289)
.+.||+|++|.||+|.+. +|+.||+|+++...... + ......+..|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 89999999998653110 0 011234568999999999988
Q ss_pred eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCC
Q 022956 80 IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 80 i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~ 158 (289)
+......... . .++||||++|+++.........++...+..++.|++.++.++|+ .| ++|+||+|+||+++ +
T Consensus 81 i~~p~~~~~~-~---~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~ 153 (190)
T cd05145 81 VPVPEPILLK-K---NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCceEEEec-C---CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-C
Confidence 7544333222 1 37999999987554432234568889999999999999999999 99 99999999999999 5
Q ss_pred CCcEEEeccCCccccCC
Q 022956 159 IGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~~~ 175 (289)
+.++|+|||++.....
T Consensus 154 -~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 -GKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCEEEEEcccceecCC
Confidence 7999999999986654
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.88 E-value=2.7e-22 Score=185.12 Aligned_cols=222 Identities=25% Similarity=0.413 Sum_probs=169.3
Q ss_pred CCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCe
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 94 (289)
+.-+ ...+.|.-|+||.||.+.|+.+.+.+|+|+-+..- ..+. ++.....|.+|
T Consensus 82 e~df-~~IklisngAygavylvrh~~trqrfa~kiNkq~l------ilRn------ilt~a~npfvv------------- 135 (1205)
T KOG0606|consen 82 ESDF-NTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL------ILRN------ILTFAGNPFVV------------- 135 (1205)
T ss_pred cccc-ceeEeeccCCCCceeeeeccccccchhhcccccch------hhhc------cccccCCccee-------------
Confidence 3444 34789999999999999999999999995443210 0110 11222222222
Q ss_pred eEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 95 LNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
|.=...+...++++... +.+++|||+.| ++|+|++|+|.+|+.- |.+|++|||+.....
T Consensus 136 ----------gDc~tllk~~g~lPvdm--------vla~Eylh~yg--ivhrdlkpdnllIT~m-GhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 ----------GDCATLLKNIGPLPVDM--------VLAVEYLHSYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKKGL 194 (1205)
T ss_pred ----------chhhhhcccCCCCcchh--------hHHhHhhccCC--eecCCCCCCcceeeec-ccccccchhhhhhhh
Confidence 23444445555566544 78899999999 9999999999999999 999999999986532
Q ss_pred Ccc----------------ccccCCCCCCCCCCcc-cccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC
Q 022956 175 RSH----------------AAHSIIGTPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG 237 (289)
Q Consensus 175 ~~~----------------~~~~~~~~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 237 (289)
... .....+++|.|.|||+ +..+|..+.|.|+||+|+|+.+-|..||.+...++-+-+.+...
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 111 1123489999999995 55669999999999999999999999999877776666666666
Q ss_pred CCCCCCCCCCChHHHHHHHHHHc-CCCCC---CCHHHHhcCcccccCCCC
Q 022956 238 VKPQALNKVKDPEVKAFIEKCIA-QPRAR---PSASELLKDPFFSELNDD 283 (289)
Q Consensus 238 ~~~~~~~~~~~~~~~~li~~~l~-dp~~R---ps~~~il~h~~~~~~~~~ 283 (289)
..+..-....++++++++..+|+ +|..| +.+-++..|+||..+||.
T Consensus 275 i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 275 IEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred ccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 66655567778999999999998 99999 578899999999999997
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=2.6e-21 Score=152.57 Aligned_cols=185 Identities=12% Similarity=0.048 Sum_probs=139.3
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCCCeeEEEe
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
+...|+.|+||+|+.+.. .+.+++.+.+.....-........+.+|+++|++|.| ++++.+++. +..+++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~~~lvm 77 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DGRHLDR 77 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cCEEEEE
Confidence 578899999999998854 6888988888766543223334468999999999965 778888774 2368999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCC-CCCceEEeCCCCcEEEeccCCccccCCccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDL-NCSNIFINGNIGQVKIGDLGFAAIVGRSHA 178 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl-~~~nili~~~~~~~~l~d~g~~~~~~~~~~ 178 (289)
+|+.|.+|...... ....++.|++.+|.++|+.| ++|+|| +|.||+++.+ +.++|+|||++........
T Consensus 78 eyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 78 SYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQED-GSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred eeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCC-CCEEEEECCCceecCCcch
Confidence 99999998764322 12457789999999999999 999999 7999999987 8999999999986543321
Q ss_pred c----c----------cCCCCCCCCCCccc--ccCCC-CcchHHHHHHHHHHHHhCCCCCCC
Q 022956 179 A----H----------SIIGTPEYMAPELY--EEDYT-EMVDIYSFGLCLLEMVTMEIPYSE 223 (289)
Q Consensus 179 ~----~----------~~~~~~~~~aPE~~--~~~~~-~~~Di~slG~il~~l~tg~~p~~~ 223 (289)
. . -...++.++.|+.. -...+ ++.+.++.|+-+|.++|+..++-+
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 1 0 01245667777632 22344 567888999999999999887653
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.84 E-value=7.3e-20 Score=146.68 Aligned_cols=137 Identities=18% Similarity=0.128 Sum_probs=106.7
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-----CCCceEEeeeeEEeCCC-Ce-
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-----KNKYIIVCYSVWLDDQH-NT- 94 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~-~~- 94 (289)
.+.||+|++|.||. +..++.. +||++..... ...+.+.+|+++++.+ .||||+++++++.++.+ ..
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 46799999999995 7777666 6998876432 2246789999999999 57999999999876542 33
Q ss_pred eEEEecc--ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHhcCCCCceecCCCCCceEEeCC---CCcEEEeccC
Q 022956 95 LNFITEV--CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGL-EYLHTHEPCIIHRDLNCSNIFINGN---IGQVKIGDLG 168 (289)
Q Consensus 95 ~~lv~e~--~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l-~~lh~~~~~~~h~dl~~~nili~~~---~~~~~l~d~g 168 (289)
+.+|+|| +.+++|.+++.+. .+++. ..++.|++.++ +|||+++ ++|+||||+||+++.+ ...++|+|++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 3378999 5578999999774 46655 35677888777 9999999 9999999999999743 1479999954
Q ss_pred Cc
Q 022956 169 FA 170 (289)
Q Consensus 169 ~~ 170 (289)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 422
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=4.7e-20 Score=154.52 Aligned_cols=189 Identities=22% Similarity=0.300 Sum_probs=140.5
Q ss_pred CCCceEEeeeeEEe-------------------------CCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHH
Q 022956 76 KNKYIIVCYSVWLD-------------------------DQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVL 130 (289)
Q Consensus 76 ~~~~i~~~~~~~~~-------------------------~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~ 130 (289)
+||||+.+...|.+ .++.++|+||..++. +|..++.... .+.....-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHHH
Confidence 59999998876643 124689999999977 9999998643 67788899999999
Q ss_pred HHHHHHhcCCCCceecCCCCCceEEeCC---CCcEEEeccCCccccCCccc-----c-c-cCCCCCCCCCCcccccCC--
Q 022956 131 EGLEYLHTHEPCIIHRDLNCSNIFINGN---IGQVKIGDLGFAAIVGRSHA-----A-H-SIIGTPEYMAPELYEEDY-- 198 (289)
Q Consensus 131 ~~l~~lh~~~~~~~h~dl~~~nili~~~---~~~~~l~d~g~~~~~~~~~~-----~-~-~~~~~~~~~aPE~~~~~~-- 198 (289)
+|+.|||++| +.|+|+|.+||++.-+ -..++++|||.+.....-.- + . ...|.-.-+|||+....+
T Consensus 352 Eav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 352 EAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 9999999999 9999999999999322 24799999998754432111 1 1 123566789999765332
Q ss_pred -----CCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHH
Q 022956 199 -----TEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSAS 269 (289)
Q Consensus 199 -----~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~ 269 (289)
-.++|.|+.|.+.||+++...||-......-.... .+......++..+++.+++|+..+|+ ||++|++..
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 23799999999999999999999752211111111 11223345677789999999999999 999998763
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.3e-20 Score=176.59 Aligned_cols=199 Identities=20% Similarity=0.210 Sum_probs=153.8
Q ss_pred CceeeCCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC---CCceEEee
Q 022956 8 PFVEVDPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK---NKYIIVCY 84 (289)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~ 84 (289)
+......++.-+-|.+.||+|+||+||.|.+.. |+.||+|+-+....= +..+. .+++.+|+ -+.|..+.
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-EfYI~------~q~~~RLk~~~~~~~~~~~ 760 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-EFYIC------LQVMERLKPQMLPSIMHIS 760 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-eeeeh------HHHHHhhchhhhcchHHHH
Confidence 334444444444589999999999999998875 999999998765321 11122 23333333 23444444
Q ss_pred eeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe------CC
Q 022956 85 SVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN------GN 158 (289)
Q Consensus 85 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~------~~ 158 (289)
..+... +.-++|++|.+.|+|.+++...+.+++..+..+..|++..+.+||..+ |+||||||+|+++. .+
T Consensus 761 ~a~~~~--~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 761 SAHVFQ--NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred HHHccC--CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCc
Confidence 444444 346779999999999999998899999999999999999999999999 99999999999993 23
Q ss_pred CCcEEEeccCCcccc---CCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCC
Q 022956 159 IGQVKIGDLGFAAIV---GRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTME 218 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~ 218 (289)
.--++|+|||.+... .....+...+.+-.|-++|...|. ++...|.|+|+.+++.|+.|+
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 356999999998654 344456667888899999977766 999999999999999999984
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=4.9e-20 Score=151.11 Aligned_cols=151 Identities=19% Similarity=0.188 Sum_probs=116.5
Q ss_pred CcccceeeeecccCcceEEEEe-ecCCCcEEEEEEeeecccCC------------------C--HHHHHHHHHHHHHHHh
Q 022956 16 GRFGRYSDLLGSGAVKKVYRAF-DQEEGIEVAWNQVRLSHFSE------------------D--PVLVNRLHSEVQLLRT 74 (289)
Q Consensus 16 ~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~aiK~~~~~~~~~------------------~--~~~~~~~~~e~~~l~~ 74 (289)
++.|++.+.||+|++|.||+|. +..+|+.||+|+++...... + ......+..|+..+.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3445788999999999999998 77789999999998653210 0 0122346789999999
Q ss_pred CCCCc--eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCc
Q 022956 75 LKNKY--IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSN 152 (289)
Q Consensus 75 l~~~~--i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~n 152 (289)
+.+.+ ++..+.. . ..++||||++|.+|.........+....+..++.|++.++.+||+.|. ++|+||+|+|
T Consensus 107 L~~~~i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~-iiH~Dikp~N 179 (237)
T smart00090 107 LYEAGVPVPKPIAW---R---RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGE-LVHGDLSEYN 179 (237)
T ss_pred HHhcCCCCCeeeEe---c---CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCC-EEeCCCChhh
Confidence 97533 3333332 2 247999999998887765444556777788999999999999999874 8999999999
Q ss_pred eEEeCCCCcEEEeccCCccccCC
Q 022956 153 IFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 153 ili~~~~~~~~l~d~g~~~~~~~ 175 (289)
|+++ + +.++|+|||.+.....
T Consensus 180 Ili~-~-~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 180 ILVH-D-GKVVIIDVSQSVELDH 200 (237)
T ss_pred EEEE-C-CCEEEEEChhhhccCC
Confidence 9999 5 7999999998875443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=1.5e-18 Score=140.49 Aligned_cols=138 Identities=19% Similarity=0.268 Sum_probs=111.9
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCC----HHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEE
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED----PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 98 (289)
+.||+|++|.||++.+ +|..+++|+......... .....++.+|+..+..+.|+++......+... ...+++
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENFIIV 77 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCCEEE
Confidence 5799999999999976 678899998764332211 11234688899999999998887665555444 357889
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
|||++|.+|.+++..... ....++.+++.+|.++|+.+ ++|+|++|.||+++ + +.++++|||.+..
T Consensus 78 ~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~-~~~~liDf~~a~~ 143 (211)
T PRK14879 78 MEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-G-GKIYLIDFGLAEF 143 (211)
T ss_pred EEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-C-CCEEEEECCcccC
Confidence 999999999999876432 88899999999999999999 99999999999999 5 7899999998764
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=2e-20 Score=171.26 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=204.5
Q ss_pred CCcccceeeeecccCcceEEEEeecCC-CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCceEEeeeeEEeCCC
Q 022956 15 SGRFGRYSDLLGSGAVKKVYRAFDQEE-GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYIIVCYSVWLDDQH 92 (289)
Q Consensus 15 ~~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~ 92 (289)
...| ++.+.||+|+++.+-.+....+ ...+|.|.+.... ......+.+..|..+.+.+. |+|++..++.... .
T Consensus 19 ~~~~-~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--~ 93 (601)
T KOG0590|consen 19 NSQY-KLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--P 93 (601)
T ss_pred cccc-cccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCC--C
Confidence 5555 6789999999999998876444 3446666666554 34555677777888888887 9999999988744 3
Q ss_pred CeeEEEeccccCCcHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCceEEeCCCC-cEEEeccC
Q 022956 93 NTLNFITEVCTSGNLRTYR-KKHR-HVSIKALKKWSKQVLEGLEYLH-THEPCIIHRDLNCSNIFINGNIG-QVKIGDLG 168 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~-~~~~-~l~~~~~~~~~~ql~~~l~~lh-~~~~~~~h~dl~~~nili~~~~~-~~~l~d~g 168 (289)
...++..++..|+++.+.+ ..+. ..+...+...+.|+..++.|+| ..+ +.|+|++|+|.+++.. + .+++.|||
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s-~~~l~~~df~ 170 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDES-GSALKIADFG 170 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccC-CCcccCCCch
Confidence 6788899999999999988 5544 6778889999999999999999 889 9999999999999988 7 99999999
Q ss_pred CccccCC-cc---ccccCCC-CCCCCCCcccccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCC--CC
Q 022956 169 FAAIVGR-SH---AAHSIIG-TPEYMAPELYEED--YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGG--VK 239 (289)
Q Consensus 169 ~~~~~~~-~~---~~~~~~~-~~~~~aPE~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~ 239 (289)
++..+.. .+ .....+| ++.|.|||...+. ..+..|+||.|+++.-+++|..||.........+...... ..
T Consensus 171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 250 (601)
T KOG0590|consen 171 LATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF 250 (601)
T ss_pred hhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc
Confidence 9987755 22 2334577 9999999977763 7888999999999999999999998765444333222222 11
Q ss_pred CCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 240 PQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 240 ~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
....+...+....+++.+++. +|.+|.+.+++-.+||+..
T Consensus 251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 251 TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 234455567888999999997 9999999999999999988
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=1.9e-19 Score=155.93 Aligned_cols=175 Identities=29% Similarity=0.518 Sum_probs=136.1
Q ss_pred CeeEEEeccccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 93 NTLNFITEVCTSGNLRTYRKKH---RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
.+++|.|++|.-.+|.+|+... ...+....+.++.|++.++.| ++ .+|+|++|.||++..+ ..++|.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d-~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDD-DQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccc-hhhhhhhhhh
Confidence 3689999999999999999743 456778899999999999999 78 9999999999999888 6999999999
Q ss_pred ccccCCcc-------ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCC
Q 022956 170 AAIVGRSH-------AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQ 241 (289)
Q Consensus 170 ~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 241 (289)
.+...... ......++..|++||.+.+. ++.++|||+||+++++++. +|.....-......+..+.-++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g~ip~ 479 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRDGIIPP 479 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcCCCCh
Confidence 98765444 23346789999999987765 9999999999999999997 3433222233333444433332
Q ss_pred CCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccc
Q 022956 242 ALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFF 277 (289)
Q Consensus 242 ~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~ 277 (289)
.... ..+.-.+|+.+|+. .|.+||++.+.-.|.|.
T Consensus 480 ~~~~-d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 480 EFLQ-DYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred HHhh-cCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 2111 24566789999998 99999988887777775
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=4.5e-18 Score=136.41 Aligned_cols=134 Identities=17% Similarity=0.236 Sum_probs=106.0
Q ss_pred eecccCcceEEEEeecCCCcEEEEEEeeecccCCC----HHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEe
Q 022956 24 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED----PVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 99 (289)
.||+|++|.||++.. +|..+++|.......... .....++.+|+++++.+.++++.......... ...+++|
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEE
Confidence 489999999999974 578999999765432221 12246688999999999988755444333333 3468899
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
||++|++|.+++..... .++.+++.+|.+||+.| ++|+|++|.||+++ + +.++++|||.+..
T Consensus 77 e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~-~~~~liDfg~a~~ 138 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-D-DKLYLIDFGLGKY 138 (199)
T ss_pred EEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-C-CcEEEEECCCCcC
Confidence 99999999998765321 88999999999999999 99999999999999 5 7999999998764
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.5e-18 Score=152.61 Aligned_cols=198 Identities=24% Similarity=0.395 Sum_probs=152.8
Q ss_pred HHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 022956 72 LRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKK-HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNC 150 (289)
Q Consensus 72 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~ 150 (289)
|+.+.|.|+.++++...+. ...+.|.+||.-|+|.+.+.. .-.++......+++.++.||.|+|..-. .+|+.++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i-~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPI-GYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcc-eeeeeecc
Confidence 3568899999999999877 578889999999999999987 4568888889999999999999998863 39999999
Q ss_pred CceEEeCCCCcEEEeccCCccccCCc---cccccCCCCCCCCCCcccccC--------CCCcchHHHHHHHHHHHHhCCC
Q 022956 151 SNIFINGNIGQVKIGDLGFAAIVGRS---HAAHSIIGTPEYMAPELYEED--------YTEMVDIYSFGLCLLEMVTMEI 219 (289)
Q Consensus 151 ~nili~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~--------~~~~~Di~slG~il~~l~tg~~ 219 (289)
.|.+++.. -.+|++|||+....... .......-..-|.|||.++.. .+.+.|+||+|++++++++...
T Consensus 78 ~nClvd~~-w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 78 SNCLVDSR-WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ccceeeee-EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999 79999999998776431 111112234578899977653 4667999999999999999999
Q ss_pred CCCCCC---cHHHHHHHHhC-CC---CCCCCCC-CCChHHHHHHHHHHc-CCCCCCCHHHHhc
Q 022956 220 PYSECD---SVAKIYKKVTG-GV---KPQALNK-VKDPEVKAFIEKCIA-QPRARPSASELLK 273 (289)
Q Consensus 220 p~~~~~---~~~~~~~~~~~-~~---~~~~~~~-~~~~~~~~li~~~l~-dp~~Rps~~~il~ 273 (289)
||+... ........+.+ +. .|..... -..+.+..+++.||. +|.+||+++++-.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 998522 11234444444 22 1111111 234578999999998 9999999999866
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=4.1e-18 Score=136.57 Aligned_cols=143 Identities=22% Similarity=0.196 Sum_probs=109.1
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC--H----------------HHHHHHHHHHHHHHhCCCC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED--P----------------VLVNRLHSEVQLLRTLKNK 78 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~--~----------------~~~~~~~~e~~~l~~l~~~ 78 (289)
..+.+.+.||+|+||.||++.+. +|+.+|+|++........ . ........|+..+..+.++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred chhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 33567899999999999999875 799999999875431000 0 1112367788889888777
Q ss_pred c--eEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe
Q 022956 79 Y--IIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 156 (289)
Q Consensus 79 ~--i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~ 156 (289)
+ ++..+. . ...+++|||++|++|...... .....++.+++.++.++|+.| ++|+||+|.||+++
T Consensus 94 ~i~v~~~~~----~--~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~ 159 (198)
T cd05144 94 GFPVPKPID----W--NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVD 159 (198)
T ss_pred CCCCCceee----c--CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEc
Confidence 4 333332 1 235889999999998765431 345678899999999999999 99999999999999
Q ss_pred CCCCcEEEeccCCccccCC
Q 022956 157 GNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 157 ~~~~~~~l~d~g~~~~~~~ 175 (289)
.+ +.++|+|||++.....
T Consensus 160 ~~-~~~~liDfg~~~~~~~ 177 (198)
T cd05144 160 DD-EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CC-CcEEEEECCccccCCC
Confidence 87 8999999999975544
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=1.6e-17 Score=152.30 Aligned_cols=141 Identities=18% Similarity=0.222 Sum_probs=108.8
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCC----CHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCC
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE----DPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQH 92 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 92 (289)
..+...++||+|+||+||++.+. +..+++|+........ .....+++.+|+++++.++|++++.........
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-- 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-- 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--
Confidence 33345789999999999999765 4455555433222111 112346788999999999999988766554443
Q ss_pred CeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 93 NTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 93 ~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
...++||||++|++|.+++. ....++.+++.+|.+||+.| ++|+|++|+||+++ + +.++|+|||++..
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl~-~-~~~~liDFGla~~ 476 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIVR-D-DRLYLIDFGLGKY 476 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEEE-C-CcEEEEeCccccc
Confidence 34679999999999999886 35678999999999999999 99999999999994 4 6899999998875
Q ss_pred c
Q 022956 173 V 173 (289)
Q Consensus 173 ~ 173 (289)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.73 E-value=3.4e-17 Score=130.04 Aligned_cols=141 Identities=22% Similarity=0.230 Sum_probs=99.5
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHH--------------------HHHHHHHHHHHhCCCCc--
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLV--------------------NRLHSEVQLLRTLKNKY-- 79 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------------------~~~~~e~~~l~~l~~~~-- 79 (289)
.+.||+|+||+||+|.+. +|..||+|++............ .....|...+.++.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999886 8999999998764321111000 01245666666665443
Q ss_pred eEEeeeeEEeCCCCeeEEEeccccCCcHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeC
Q 022956 80 IIVCYSVWLDDQHNTLNFITEVCTSGNLR-TYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 80 i~~~~~~~~~~~~~~~~lv~e~~~~~sL~-~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~ 157 (289)
+++.+.. . ..+++|||++++.+. ..+.... .. ..+..++.+++.++.++|. .+ ++|+||+|+||+++
T Consensus 81 ~~~~~~~---~---~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~- 149 (187)
T cd05119 81 VPKPIDL---N---RHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD- 149 (187)
T ss_pred CCceEec---C---CCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-
Confidence 3333332 1 258999999994332 1111111 11 6788999999999999999 99 99999999999999
Q ss_pred CCCcEEEeccCCccccCC
Q 022956 158 NIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~~~ 175 (289)
+ +.++++|||.+.....
T Consensus 150 ~-~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 D-GKVYIIDVPQAVEIDH 166 (187)
T ss_pred C-CcEEEEECcccccccC
Confidence 5 7999999999875544
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.70 E-value=4e-16 Score=128.25 Aligned_cols=142 Identities=14% Similarity=0.181 Sum_probs=107.7
Q ss_pred eeeec-ccCcceEEEEeecCCCcEEEEEEeeeccc-----CC----CHHHHHHHHHHHHHHHhCCCCce--EEeeeeEEe
Q 022956 22 SDLLG-SGAVKKVYRAFDQEEGIEVAWNQVRLSHF-----SE----DPVLVNRLHSEVQLLRTLKNKYI--IVCYSVWLD 89 (289)
Q Consensus 22 ~~~lg-~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-----~~----~~~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~~ 89 (289)
...|| .|+.|+||.+... +..+++|.+..... .+ ......++.+|+.++..|.|+++ +..++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35688 8999999999764 78999999865321 10 12334678889999999998875 555554333
Q ss_pred CCCC--eeEEEeccccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEec
Q 022956 90 DQHN--TLNFITEVCTS-GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGD 166 (289)
Q Consensus 90 ~~~~--~~~lv~e~~~~-~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d 166 (289)
.... ..++|+|+++| .+|.+++... .+++.. +.+++.++.+||+.| ++|+||+|.||+++.+ +.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~~----~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~-~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA-PLSEEQ----WQAIGQLIARFHDAG--VYHADLNAHNILLDPD-GKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC-CCCHHH----HHHHHHHHHHHHHCC--CCCCCCCchhEEEcCC-CCEEEEE
Confidence 2221 23589999997 6899888753 466543 568999999999999 9999999999999988 7999999
Q ss_pred cCCcccc
Q 022956 167 LGFAAIV 173 (289)
Q Consensus 167 ~g~~~~~ 173 (289)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988754
No 434
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.5e-18 Score=140.13 Aligned_cols=267 Identities=32% Similarity=0.566 Sum_probs=180.8
Q ss_pred CCceeeCCCCcccceeeeecccCc---ceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEe
Q 022956 7 EPFVEVDPSGRFGRYSDLLGSGAV---KKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVC 83 (289)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~lg~g~~---g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 83 (289)
.-+....+-+|..+-.+..|+..- -.||++.+...|..|++-.+......+-...-+..+.-...|-++.|.|+++.
T Consensus 53 ~eIleesp~~rw~krreqv~qrdvPgid~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkf 132 (458)
T KOG1266|consen 53 SEILEESPCGRWGKRREQVGQRDVPGIDDVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKF 132 (458)
T ss_pred hhhhccCchhhhhhhhhhccCCCCCchHHHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666666655666776332 36788888888888877555443221111111223334455566779999988
Q ss_pred eeeEEeC---CCCeeEEEeccccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEe
Q 022956 84 YSVWLDD---QHNTLNFITEVCTSGNLRTYRKK----HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFIN 156 (289)
Q Consensus 84 ~~~~~~~---~~~~~~lv~e~~~~~sL~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~ 156 (289)
+.++.+. +.....++.||++.|+|..+++. ...+......+|..||.+||.|||+..|+++|+++..+.|++.
T Consensus 133 H~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq 212 (458)
T KOG1266|consen 133 HKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ 212 (458)
T ss_pred HHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec
Confidence 8766432 23467889999999999999874 4568888999999999999999999999999999999999999
Q ss_pred CCCCcEEEeccCCccccCCcc-----ccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 022956 157 GNIGQVKIGDLGFAAIVGRSH-----AAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKI 230 (289)
Q Consensus 157 ~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~ 230 (289)
.+ |-+|+.--.........+ ......+-++|.+||.-.-. .+-++|||++|....+|.-+..--.+.......
T Consensus 213 ~n-gLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ 291 (458)
T KOG1266|consen 213 HN-GLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEV 291 (458)
T ss_pred CC-ceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeeh
Confidence 88 777776544333322211 12234467889999854433 566899999999999998876543322221111
Q ss_pred HHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 231 YKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
...+. ..........-+.++.+|++ +|..||++++++.||.+=+
T Consensus 292 ee~ia-----~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 292 EENIA-----NVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred hhhhh-----hheeeccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 11111 11122223445788999999 9999999999999997644
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=4.9e-15 Score=112.92 Aligned_cols=134 Identities=19% Similarity=0.135 Sum_probs=106.5
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC--CceEEeeeeEEeCCCCeeEEE
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN--KYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~~lv 98 (289)
+.+.||+|.++.||++... +..+++|....... ...+.+|+..++.+++ ..+++++..... .+..+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~~v 71 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGES--DGWSYLL 71 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccEEE
Confidence 3578999999999999875 47899999864321 4567788899999876 477777766533 2578999
Q ss_pred eccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCC-CCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 99 TEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE-PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 99 ~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~-~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
+||+.|.++..+ +......++.+++.++..+|... .+++|+|++|.||+++.+ +.++++|||.+..
T Consensus 72 ~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~-~~~~l~Df~~~~~ 138 (155)
T cd05120 72 MEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG-KILGIIDWEYAGY 138 (155)
T ss_pred EEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC-cEEEEEecccccC
Confidence 999998777654 55677788999999999999852 129999999999999987 8999999997763
No 436
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.60 E-value=4.3e-14 Score=126.36 Aligned_cols=180 Identities=19% Similarity=0.252 Sum_probs=135.5
Q ss_pred eeecccCcceEE-EEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVY-RAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~-~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+...-++.+ +| .+..+.++.++.|...+.... .......+-++.|+.++||+|+..+..+..+ ..+|+|+|.
T Consensus 18 e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~--~~~ylvTEr 90 (690)
T KOG1243|consen 18 EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEE--GTLYLVTER 90 (690)
T ss_pred ccccCCCcc-cccccceeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhccc--CceEEEeec
Confidence 444444444 45 467788899999999986532 3355677889999999999999999988444 589999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc-c
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH-THEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA-A 179 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh-~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~-~ 179 (289)
+. .|..++.+ ++...+...+.||+.||.||| ..+ ++|++|+-+.|+++.. |..||.+|.++........ .
T Consensus 91 V~--Pl~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~-GeWkLggle~v~~~~~~~~~~ 162 (690)
T KOG1243|consen 91 VR--PLETVLKE---LGKEEVCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNES-GEWKLGGLELVSKASGFNAPA 162 (690)
T ss_pred cc--cHHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCC-CcEEEeeeEEEeccccCCccc
Confidence 86 58877776 457788889999999999997 557 9999999999999999 9999999998865544332 1
Q ss_pred ccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCC
Q 022956 180 HSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTME 218 (289)
Q Consensus 180 ~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~ 218 (289)
.....--.|..|+..... ....|.|.|||++++++.|.
T Consensus 163 ~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 163 KSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCcc
Confidence 111222344455432211 13469999999999999993
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=5.5e-15 Score=130.53 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=186.8
Q ss_pred ceeeeecc--cCcceEEEEee--cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCCCCe
Q 022956 20 RYSDLLGS--GAVKKVYRAFD--QEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQHNT 94 (289)
Q Consensus 20 ~~~~~lg~--g~~g~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 94 (289)
.+.+-+|. |.+|.+|.+.. ..++..+|+|.=+.... .+....+=.+++.....+ .|++.+..+..+ ++.+.
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s--~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~--e~~~~ 192 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS--PPLDSKRKLREFLSHHKIDSHENPVRDSPAW--EGSGI 192 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCC--CccccccccchhhcccccCccccccccCccc--ccCCc
Confidence 34567999 99999999988 88999999998544322 111122223455555555 377888766655 34467
Q ss_pred eEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHH----HHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 95 LNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLE----GLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 95 ~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~----~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
.++-+|.+. .+|..+...- ..+++..++..+.+... ||.++|+.+ ++|.|++|.||+...+-...+++|||+
T Consensus 193 lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred ceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCcce
Confidence 888999996 4777777654 44888999999999988 999999999 999999999999988755899999999
Q ss_pred ccccCCcccc------ccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCC
Q 022956 170 AAIVGRSHAA------HSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQAL 243 (289)
Q Consensus 170 ~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
...+...... ....+...|++||...+-+....|+|+||-++.+..++..+...... ..+..+.+...+...
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN--SSWSQLRQGYIPLEF 347 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC--CCccccccccCchhh
Confidence 9887654422 22357789999999999999999999999999999887655543210 111122222233334
Q ss_pred CCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 244 NKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 244 ~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
....+.+++..+..|++ +|-.|+++..++.|+++...
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 44456777788889998 99999999999999988754
No 438
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.49 E-value=6.7e-13 Score=104.72 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=103.0
Q ss_pred eeeecccCcceEEEEeecC------CCcEEEEEEeeeccc--CC-------CH-------------HHHHHHHHHHHHHH
Q 022956 22 SDLLGSGAVKKVYRAFDQE------EGIEVAWNQVRLSHF--SE-------DP-------------VLVNRLHSEVQLLR 73 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~------~~~~~aiK~~~~~~~--~~-------~~-------------~~~~~~~~e~~~l~ 73 (289)
...||+|--+.||.|.... .+..+|+|+++.... .. ++ ......++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3468999999999997543 357999999886332 10 00 11112448999999
Q ss_pred hCCCC--ceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hcCCCCceecCCCC
Q 022956 74 TLKNK--YIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYL-HTHEPCIIHRDLNC 150 (289)
Q Consensus 74 ~l~~~--~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~l-h~~~~~~~h~dl~~ 150 (289)
++... +++.++.. ..-++||||+.+..+....-+...++..++..+..+++.+|..| |+.| ++||||++
T Consensus 82 rl~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCCH
Confidence 99654 44555543 12577999998754432222223466667788899999999988 8999 99999999
Q ss_pred CceEEeCCCCcEEEeccCCccccCCc
Q 022956 151 SNIFINGNIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 151 ~nili~~~~~~~~l~d~g~~~~~~~~ 176 (289)
.||+++. +.++|+|||.+.....+
T Consensus 154 ~NIL~~~--~~v~iIDF~qav~~~hp 177 (197)
T cd05146 154 YNMLWHD--GKVWFIDVSQSVEPTHP 177 (197)
T ss_pred HHEEEEC--CcEEEEECCCceeCCCC
Confidence 9999985 57999999988765433
No 439
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.48 E-value=3.1e-14 Score=132.55 Aligned_cols=257 Identities=20% Similarity=0.299 Sum_probs=194.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
.+-+-.|.++.++.+.-..+|...++|+.......... ..+....+-.++-...+|-++.....+ ......++++++
T Consensus 809 ~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~-~~~s~r~~s~~~i~p~~P~v~~~~~s~--~~rsP~~L~~~~ 885 (1205)
T KOG0606|consen 809 TKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTN-DYESIRSKSNILITPRSPAVVRSFPSF--PCRSPLPLVGHY 885 (1205)
T ss_pred cccccCCCCcccccCCccccccccchhhhccchhhccc-cccccCCccCccccCCCCceecccCCC--CCCCCcchhhHH
Confidence 34567899999999988788877777776654322111 012222222222222334444333222 334568999999
Q ss_pred ccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCc-----
Q 022956 102 CTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRS----- 176 (289)
Q Consensus 102 ~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~----- 176 (289)
..++.|...+.+.+..+.+.+......++.++++||... ..|+|++|.|.+...+ +..++++++.......-
T Consensus 886 ~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~-gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYD-GHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred hccCCchhhhhcCCCcccccccchhHHHHhhhhccccch--hhcccccccchhhccc-CCcccCccccccccccccCcCC
Confidence 999999999998888888888888889999999999998 8999999999999988 89999999843322100
Q ss_pred ---------------------------cccccCCCCCCCCCCccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 022956 177 ---------------------------HAAHSIIGTPEYMAPELYEE-DYTEMVDIYSFGLCLLEMVTMEIPYSECDSVA 228 (289)
Q Consensus 177 ---------------------------~~~~~~~~~~~~~aPE~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~ 228 (289)
+......+++.|.+||..-+ ...+.+|.|+.|.++++.++|..||.......
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh
Confidence 00112347899999996654 48889999999999999999999999877777
Q ss_pred HHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHH---HHhcCcccccCCCCC
Q 022956 229 KIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSAS---ELLKDPFFSELNDDD 284 (289)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~---~il~h~~~~~~~~~~ 284 (289)
....++....++.......++..++++..++. +|.+|..+. ++-.|+||+..+|++
T Consensus 1043 ~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1043 IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred hhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccc
Confidence 77777777777777788889999999999998 999998777 889999999999875
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=6.7e-13 Score=118.30 Aligned_cols=145 Identities=19% Similarity=0.170 Sum_probs=96.9
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCH------------------------------HHHH------HHH
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDP------------------------------VLVN------RLH 66 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------~~~~------~~~ 66 (289)
+-||+|++|.||+|+.+ +|+.||||+.+..-...-. +... .+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999864 8999999998653210000 0000 134
Q ss_pred HHHHHHHhCC----CCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHhcCC
Q 022956 67 SEVQLLRTLK----NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH-RHVSIKALKKWSKQVLE-GLEYLHTHE 140 (289)
Q Consensus 67 ~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~-~~l~~~~~~~~~~ql~~-~l~~lh~~~ 140 (289)
+|+..+.++. +.+-+.+-.++.+-. ...++||||++|.+|.++.... ...+ ...++.+++. .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRT-SERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhc-CCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 4555444442 333333333332222 3468999999999998876532 1222 2345555555 467789999
Q ss_pred CCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 141 PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 141 ~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
++|+|++|.||+++.+ +.++++|||++.....
T Consensus 278 --~~H~D~hPgNilv~~~-g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 278 --FFHADLHPGNIFVLKD-GKIIALDFGIVGRLSE 309 (437)
T ss_pred --ceeCCCCcccEEECCC-CcEEEEeCCCeeECCH
Confidence 9999999999999888 8999999999987653
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.45 E-value=2.5e-12 Score=116.19 Aligned_cols=142 Identities=16% Similarity=0.201 Sum_probs=93.1
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeeccc---------------------CC----C-----HHHHHH------HH
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF---------------------SE----D-----PVLVNR------LH 66 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~---------------------~~----~-----~~~~~~------~~ 66 (289)
+-||+|++|.||+|..+.+|+.||||+.+..-. .+ + .+..+. +.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 569999999999999987899999999975310 00 0 011222 33
Q ss_pred HHHHHHHhCC----CCceEEeeeeEEeCCCCeeEEEeccccCCcHHHH--HHhcC----CCCHHHHHHHHHHHHHHHHHH
Q 022956 67 SEVQLLRTLK----NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY--RKKHR----HVSIKALKKWSKQVLEGLEYL 136 (289)
Q Consensus 67 ~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~--~~~~~----~l~~~~~~~~~~ql~~~l~~l 136 (289)
+|+..+.++. +...+.+-.++.+-. ...++||||+.|+.+.+. +...+ .+.+..+..++.|+.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif------ 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYC-SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF------ 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccC-CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH------
Confidence 3444444442 333333333333211 346899999999999874 23222 244444444445543
Q ss_pred hcCCCCceecCCCCCceEEeCCCC----cEEEeccCCccccCC
Q 022956 137 HTHEPCIIHRDLNCSNIFINGNIG----QVKIGDLGFAAIVGR 175 (289)
Q Consensus 137 h~~~~~~~h~dl~~~nili~~~~~----~~~l~d~g~~~~~~~ 175 (289)
..| ++|+|++|.||+++.+ | .++++|||++...+.
T Consensus 278 -~~G--ffHaDpHPGNIlv~~~-g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -RDG--FFHADMHPGNIFVSYD-PPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -hCC--eeeCCCChHHeEEecC-CCCCCeEEEEecceEEECCH
Confidence 578 9999999999999987 6 999999999876643
No 442
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.43 E-value=6.4e-12 Score=107.20 Aligned_cols=240 Identities=15% Similarity=0.225 Sum_probs=158.8
Q ss_pred eeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCc----eEEeeeeEEe-CCCCe
Q 022956 21 YSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKY----IIVCYSVWLD-DQHNT 94 (289)
Q Consensus 21 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~----i~~~~~~~~~-~~~~~ 94 (289)
..+-||+|+-+.+|-.- .-..-+-|++....-. .... -+.+|... .||- ++........ ..+..
T Consensus 15 ~gr~LgqGgea~ly~l~---e~~d~VAKIYh~Pppa----~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 15 PGRPLGQGGEADLYTLG---EVRDQVAKIYHAPPPA----AQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCccccCCccceeeecc---hhhchhheeecCCCch----HHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 45679999999999873 2233456888765421 1111 12223222 4443 2222222222 23345
Q ss_pred eEEEeccccCCc-HHHHH------HhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEecc
Q 022956 95 LNFITEVCTSGN-LRTYR------KKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDL 167 (289)
Q Consensus 95 ~~lv~e~~~~~s-L~~~~------~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~ 167 (289)
+.++|+.++|.. ...+. +..+...+..++..++.++.+.+.||..| ..-||++++|+|+.++ +.|.|+|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~-~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDD-SKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecC-ceEEEEcc
Confidence 888999998852 23322 22345678899999999999999999999 9999999999999998 89999998
Q ss_pred CCccccCCccccccCCCCCCCCCCcccc------cCCCCcchHHHHHHHHHHHHhC-CCCCCCC-------CcHH-HHH-
Q 022956 168 GFAAIVGRSHAAHSIIGTPEYMAPELYE------EDYTEMVDIYSFGLCLLEMVTM-EIPYSEC-------DSVA-KIY- 231 (289)
Q Consensus 168 g~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Di~slG~il~~l~tg-~~p~~~~-------~~~~-~~~- 231 (289)
+............+..+...|.+||.-. .+-+...|-|.||+++++++.| ..||++. ...+ .+.
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 7666555555556677899999999543 2367789999999999999885 9999852 1111 111
Q ss_pred ------HHHhCC--CCC-CCCCCCCChHHHHHHHHHHcC---CCCCCCHHHHhc
Q 022956 232 ------KKVTGG--VKP-QALNKVKDPEVKAFIEKCIAQ---PRARPSASELLK 273 (289)
Q Consensus 232 ------~~~~~~--~~~-~~~~~~~~~~~~~li~~~l~d---p~~Rps~~~il~ 273 (289)
.....+ ..+ .......++.+..|..+|+.+ +.-|||++..+.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~a 295 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVA 295 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHH
Confidence 010011 111 122334578999999999963 558999976543
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.43 E-value=6.5e-13 Score=103.60 Aligned_cols=129 Identities=20% Similarity=0.145 Sum_probs=93.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCeeEEEec
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~e 100 (289)
.+.|+.|..+.||++... +..+++|....... ....+.+|+.+++.+.+.+++ +++.. ..+ ..++|||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~--~~~lv~e 71 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYF--DPE--TGVLITE 71 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEE--eCC--CCeEEEE
Confidence 356899999999999764 78999999864321 122456788888888665544 33332 222 2478999
Q ss_pred cccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCC---CceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 101 VCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEP---CIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 101 ~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~---~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
|++|.++.+. . . .....+.+++.++..||+.+. .++|+|++|.||+++ + +.++++||+.+.
T Consensus 72 ~i~G~~l~~~----~-~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~-~~~~liDf~~a~ 135 (170)
T cd05151 72 FIEGSELLTE----D-F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D-GRLWLIDWEYAG 135 (170)
T ss_pred ecCCCccccc----c-c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C-CeEEEEeccccc
Confidence 9999877653 0 1 123456789999999999871 149999999999999 4 589999998765
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.1e-11 Score=94.96 Aligned_cols=136 Identities=20% Similarity=0.236 Sum_probs=101.3
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHH-----HHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPV-----LVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
..+++|+-+.++.+... |.++++|.=..... ..++ ..++..+|++++.++..-.+....-+.++.. ...|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~Y-R~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRY-RHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLI 76 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCccc-CChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEE
Confidence 35789999999999664 55666665433322 2222 3456888999999998777665554444443 4567
Q ss_pred EeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 98 ITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 98 v~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+|||++|..|.+.+... ...++..+-.-+.-||..| ++||||+++|+++..+ .++++|||++.+..
T Consensus 77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~--~i~~IDfGLg~~s~ 142 (204)
T COG3642 77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGG--RIYFIDFGLGEFSD 142 (204)
T ss_pred EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCC--cEEEEECCcccccc
Confidence 99999999999999875 1455666666778899999 9999999999999876 59999999998554
No 445
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.34 E-value=9.5e-11 Score=102.42 Aligned_cols=214 Identities=16% Similarity=0.217 Sum_probs=154.5
Q ss_pred CcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeC--CCCeeEEEeccccCC-
Q 022956 29 AVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDD--QHNTLNFITEVCTSG- 105 (289)
Q Consensus 29 ~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~~lv~e~~~~~- 105 (289)
.-.+.|++....||..|++|.+...+... ...-..-++.++++.|+|+|++.+++... .+..+++|++|+++.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~----~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS----TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC----cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 45688999999999999999995433211 11223367889999999999998887632 336799999999884
Q ss_pred cHHHHHH---------------hcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 106 NLRTYRK---------------KHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 106 sL~~~~~---------------~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+|.++.- ++...++..++.++.|+..||.++|+.| +...-|.+.+|+++.+ .+++|...|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~-~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGK-MRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCc-ceEEEecccce
Confidence 6665531 2345788999999999999999999999 9999999999999988 69999999988
Q ss_pred cccCCccccccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHhCCCCCCCCCCCCCh
Q 022956 171 AIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIP-YSECDSVAKIYKKVTGGVKPQALNKVKDP 249 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
........ +| +. ...+-|.-.||.+++.|.||..- +............ +....+.
T Consensus 441 Dvl~~d~~-----------~~--le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~---------I~~~yS~ 496 (655)
T KOG3741|consen 441 DVLQEDPT-----------EP--LE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR---------ITTTYST 496 (655)
T ss_pred eeecCCCC-----------cc--hh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH---------hhhhhhH
Confidence 76654420 01 00 12356889999999999998432 2221111111222 2334577
Q ss_pred HHHHHHHHHHc-CCCCCCCHHHHhcC
Q 022956 250 EVKAFIEKCIA-QPRARPSASELLKD 274 (289)
Q Consensus 250 ~~~~li~~~l~-dp~~Rps~~~il~h 274 (289)
++++++..+.. .+++ -++.+++.+
T Consensus 497 D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 497 DLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 88888888886 6665 677777764
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.32 E-value=4.1e-11 Score=91.53 Aligned_cols=146 Identities=19% Similarity=0.267 Sum_probs=109.6
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccC----CCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS----EDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 97 (289)
...|-+|+-+.|+++.+. |+..+||.-...... +..-...+..+|++.|.++.--.|....-++.+..+ -.+
T Consensus 12 l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~--~~i 87 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG--GQI 87 (229)
T ss_pred ceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC--CeE
Confidence 577889999999999765 888888875443332 123346678999999999987677655555555543 455
Q ss_pred EeccccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcE--EEeccCCccc
Q 022956 98 ITEVCTS-GNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQV--KIGDLGFAAI 172 (289)
Q Consensus 98 v~e~~~~-~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~--~l~d~g~~~~ 172 (289)
.|||++| .++.+++... ..........++.++-+.+.-||..+ ++||||+.+||++.++.+.+ .++|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhc
Confidence 7999988 4778887653 22333444788999999999999999 99999999999997764444 8999998875
Q ss_pred c
Q 022956 173 V 173 (289)
Q Consensus 173 ~ 173 (289)
.
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 4
No 447
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=7.6e-12 Score=110.84 Aligned_cols=251 Identities=20% Similarity=0.198 Sum_probs=168.3
Q ss_pred CCCcccceeeeecccCcceEEEEeec-CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhC-CCCceEEeeeeEEeCC
Q 022956 14 PSGRFGRYSDLLGSGAVKKVYRAFDQ-EEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTL-KNKYIIVCYSVWLDDQ 91 (289)
Q Consensus 14 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 91 (289)
..+.+. .+.+||.|.|+.++.+... .++..|++|-....-.....+ ..-..|+.+...+ .|.+++.....+..-
T Consensus 263 ~~~df~-~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d--i~sl~ev~l~~~l~~~~~~~g~~~~W~~~- 338 (524)
T KOG0601|consen 263 KLTDFG-LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD--IFSLGEVILEAILGSHLPSVGKNSSWSQL- 338 (524)
T ss_pred ecCCcc-eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh--hcchhhhhHhhHhhcccccCCCCCCcccc-
Confidence 344553 5789999999999988644 678899999887654322111 2223344444444 466666655555332
Q ss_pred CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 92 HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 92 ~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
...++-.|||.++++.....-...+.+...+.+..|++.++.++|+.. ++|+|++|+||++..+.+..++.|++.+.
T Consensus 339 -r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 339 -RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred -ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhcccccccc
Confidence 345688999999988777655566888899999999999999999999 99999999999997754788999998886
Q ss_pred ccCCccccccCCCCCCCCC-Cc-ccccC-CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCC
Q 022956 172 IVGRSHAAHSIIGTPEYMA-PE-LYEED-YTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKD 248 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~a-PE-~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
....... ......++.| .| ..... +..++|+++||..+.+.+++...-.... ....+.++..+.. +.. .
T Consensus 416 ~~~~~~~--~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----~~~~i~~~~~p~~-~~~-~ 487 (524)
T KOG0601|consen 416 RLAFSSG--VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----QSLTIRSGDTPNL-PGL-K 487 (524)
T ss_pred ccceecc--cccccccccccchhhccccccccccccccccccccccccCcccCcccc----cceeeecccccCC-Cch-H
Confidence 4221111 1112223442 44 33333 7889999999999999999853221111 1112222222222 222 2
Q ss_pred hHHHHHHHHHHc-CCCCCCCHHHHhcCccccc
Q 022956 249 PEVKAFIEKCIA-QPRARPSASELLKDPFFSE 279 (289)
Q Consensus 249 ~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~ 279 (289)
..+..+.+.+.. ++..||.+.++..|.=|..
T Consensus 488 ~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 488 LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 667777778877 9999999999998865543
No 448
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.22 E-value=1.2e-10 Score=94.62 Aligned_cols=144 Identities=17% Similarity=0.205 Sum_probs=102.2
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc--eEEeeeeEEeCC-CCeeEEEe
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY--IIVCYSVWLDDQ-HNTLNFIT 99 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~~-~~~~~lv~ 99 (289)
+.||.|..+.+|++... +|..+++|........ .....+.+|+++++.+.+.+ +++++....... .+..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 56899999999999764 3689999998654321 12456788999999997644 345554432211 12568999
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTH---------------------------------------- 139 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---------------------------------------- 139 (289)
|+++|.++.+.+.. ..+++.+...++.+++.+|..||+.
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999888765432 3466677777777777777777742
Q ss_pred --------------CCCceecCCCCCceEEeCC-CCcEEEeccCCcc
Q 022956 140 --------------EPCIIHRDLNCSNIFINGN-IGQVKIGDLGFAA 171 (289)
Q Consensus 140 --------------~~~~~h~dl~~~nili~~~-~~~~~l~d~g~~~ 171 (289)
...++|+|+.+.||+++++ .+.+.++||+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 1247999999999999983 2678999998665
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=1.3e-11 Score=111.13 Aligned_cols=153 Identities=19% Similarity=0.335 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCccccCCccc----------cccCCCCCCCCCCcccc
Q 022956 126 SKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHA----------AHSIIGTPEYMAPELYE 195 (289)
Q Consensus 126 ~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~aPE~~~ 195 (289)
+.+++.|+.++|..-. ++|++|.|++|.++.+ +.+|+++|+++.....+.. ......+..|.|||...
T Consensus 105 l~~v~dgl~flh~sAk-~VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAK-VVHGNIQPEAIVVNAN-GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCcc-eeecccchhheeeccC-cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3444499999998732 9999999999999999 9999999998865543111 11123467999999766
Q ss_pred cC-CCCcchHHHHHHHHHHHHhC-CCCCCCCCcH-HHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHH
Q 022956 196 ED-YTEMVDIYSFGLCLLEMVTM-EIPYSECDSV-AKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASEL 271 (289)
Q Consensus 196 ~~-~~~~~Di~slG~il~~l~tg-~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~i 271 (289)
+. .++++|+||||+++|.+..| +.-+...... ..-......+..........++++++=+.+++. ++.-||++..+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 55 78899999999999999964 4444332212 222222222222333456678999999999998 99999999999
Q ss_pred hcCcccccC
Q 022956 272 LKDPFFSEL 280 (289)
Q Consensus 272 l~h~~~~~~ 280 (289)
+..|||.+-
T Consensus 263 ~~~~ff~D~ 271 (700)
T KOG2137|consen 263 LSIPFFSDP 271 (700)
T ss_pred hcccccCCc
Confidence 999999875
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.18 E-value=4.8e-10 Score=88.22 Aligned_cols=130 Identities=25% Similarity=0.272 Sum_probs=84.7
Q ss_pred eEEEEeecCCCcEEEEEEeeecccC----------------------CCHHHHHHHHHHHHHHHhCCCCc--eEEeeeeE
Q 022956 32 KVYRAFDQEEGIEVAWNQVRLSHFS----------------------EDPVLVNRLHSEVQLLRTLKNKY--IIVCYSVW 87 (289)
Q Consensus 32 ~v~~~~~~~~~~~~aiK~~~~~~~~----------------------~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~ 87 (289)
.||.|.. .+|..+|+|+.+..... ..........+|.+.|.++...+ ++.++.+
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 4788875 46889999998763211 11234556899999999998764 4555543
Q ss_pred EeCCCCeeEEEecccc--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HhcCCCCceecCCCCCceEEeCCCCcEEE
Q 022956 88 LDDQHNTLNFITEVCT--SGNLRTYRKKHRHVSIKALKKWSKQVLEGLEY-LHTHEPCIIHRDLNCSNIFINGNIGQVKI 164 (289)
Q Consensus 88 ~~~~~~~~~lv~e~~~--~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~-lh~~~~~~~h~dl~~~nili~~~~~~~~l 164 (289)
.. -++||||++ |..+..+.... ++......++.+++..+.. +|+.| ++||||++.||+++++ .+++
T Consensus 79 -~~----~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~--~~~i 147 (188)
T PF01163_consen 79 -NR----NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG--KVYI 147 (188)
T ss_dssp -ET----TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT--CEEE
T ss_pred -eC----CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc--eEEE
Confidence 22 468999999 76665544432 1234556677777774444 58999 9999999999999986 8999
Q ss_pred eccCCccccC
Q 022956 165 GDLGFAAIVG 174 (289)
Q Consensus 165 ~d~g~~~~~~ 174 (289)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999887554
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.15 E-value=1.4e-09 Score=90.68 Aligned_cols=138 Identities=17% Similarity=0.082 Sum_probs=94.8
Q ss_pred ceEEEEeecCCCcEEEEEEeeecccCCC-H------HHHHHHHHHHHHHHhCCCCceE--EeeeeEEeCC---CCeeEEE
Q 022956 31 KKVYRAFDQEEGIEVAWNQVRLSHFSED-P------VLVNRLHSEVQLLRTLKNKYII--VCYSVWLDDQ---HNTLNFI 98 (289)
Q Consensus 31 g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~------~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~~~---~~~~~lv 98 (289)
..|.++.. .|+.|.+|......+.+- . .-...+.+|...+.+|...+|. .++.+..... ...-++|
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 34556543 478899997744332100 0 0011367888888888544443 2333332111 2346789
Q ss_pred eccccCC-cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC------CCCcEEEeccCC
Q 022956 99 TEVCTSG-NLRTYRKK--HRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING------NIGQVKIGDLGF 169 (289)
Q Consensus 99 ~e~~~~~-sL~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~------~~~~~~l~d~g~ 169 (289)
+|++++. +|.+++.. ....+......++.+++..+..||..| ++|+|++++||+++. +...+.|+||+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 9999986 89998864 345667788899999999999999999 999999999999975 226899999987
Q ss_pred ccc
Q 022956 170 AAI 172 (289)
Q Consensus 170 ~~~ 172 (289)
+..
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 753
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.04 E-value=2.1e-09 Score=87.36 Aligned_cols=141 Identities=22% Similarity=0.227 Sum_probs=101.7
Q ss_pred ccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC-------C---------C--HHHHHHHHHHHHHHHhCCCC-
Q 022956 18 FGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS-------E---------D--PVLVNRLHSEVQLLRTLKNK- 78 (289)
Q Consensus 18 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-------~---------~--~~~~~~~~~e~~~l~~l~~~- 78 (289)
...++.+||-|--|.||.|.+. .|.++|+|.=+..... . + ...+...++|.++|..|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 4467789999999999999875 7899999985543210 0 0 12345578899999999765
Q ss_pred -ceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeC
Q 022956 79 -YIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFING 157 (289)
Q Consensus 79 -~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~ 157 (289)
.+++.+++ +.-.+|||+++|..|....- +.+..-.++..|+.-+..+-..| ++|||+++-||+++.
T Consensus 171 ~~VP~P~~~------nRHaVvMe~ieG~eL~~~r~-----~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~ 237 (304)
T COG0478 171 VKVPKPIAW------NRHAVVMEYIEGVELYRLRL-----DVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCCCcccc------ccceeeeehcccceeecccC-----cccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEec
Confidence 66676654 35678999999977766442 23333444444444444444678 999999999999999
Q ss_pred CCCcEEEeccCCcccc
Q 022956 158 NIGQVKIGDLGFAAIV 173 (289)
Q Consensus 158 ~~~~~~l~d~g~~~~~ 173 (289)
+ |.++++||..+...
T Consensus 238 d-g~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 D-GDIVVIDWPQAVPI 252 (304)
T ss_pred C-CCEEEEeCcccccC
Confidence 9 99999999766543
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.95 E-value=1.2e-08 Score=80.91 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=98.9
Q ss_pred cccCcceEEEEeecCCCcEEEEEEeeecccCC--CHHHHHHHHHHHHHHHhCCCCce--EEeeeeEE--eCCCCeeEEEe
Q 022956 26 GSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE--DPVLVNRLHSEVQLLRTLKNKYI--IVCYSVWL--DDQHNTLNFIT 99 (289)
Q Consensus 26 g~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~--~~~~~~~~lv~ 99 (289)
|.|+.|.|++.... |+.+-+|.-...-... -+--...|.+|...|++|..-++ ++++..-. ......-.||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 45888999998654 5567788764111000 01234678889888888865443 33331111 11123467899
Q ss_pred ccccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCc--EEEeccCCcc
Q 022956 100 EVCTS-GNLRTYRKKH--RHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQ--VKIGDLGFAA 171 (289)
Q Consensus 100 e~~~~-~sL~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~--~~l~d~g~~~ 171 (289)
|-+.| .+|.+++.+. .+.+..+...++.+++..+.-||+.| +.|+|+.+.||+++.+ +. +.++||.-+.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~-g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTE-GKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCC-CCeeEEEEEhhccc
Confidence 97765 4899998763 35678888999999999999999999 9999999999999866 56 9999996443
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.87 E-value=1.2e-08 Score=82.02 Aligned_cols=109 Identities=20% Similarity=0.190 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHhCCCCce--EEeeeeEEeCC--CCeeEEEeccccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 022956 62 VNRLHSEVQLLRTLKNKYI--IVCYSVWLDDQ--HNTLNFITEVCTSG-NLRTYRKKHRHVSIKALKKWSKQVLEGLEYL 136 (289)
Q Consensus 62 ~~~~~~e~~~l~~l~~~~i--~~~~~~~~~~~--~~~~~lv~e~~~~~-sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~l 136 (289)
..+..+|...+..|...+| +..+.+..... ....++|+|++++. +|.+++.....++......++.+++..+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3457778887777754443 23333332211 13458899999885 8999998755577888899999999999999
Q ss_pred hcCCCCceecCCCCCceEEeCCCC---cEEEeccCCcccc
Q 022956 137 HTHEPCIIHRDLNCSNIFINGNIG---QVKIGDLGFAAIV 173 (289)
Q Consensus 137 h~~~~~~~h~dl~~~nili~~~~~---~~~l~d~g~~~~~ 173 (289)
|..| ++|+|+++.|||++.+ + .+.++||+-+...
T Consensus 135 H~~g--i~H~Dl~~~NILv~~~-~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 135 HDAG--IYHGDLNPSNILVDPD-DGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHCc--CCCCCCCcccEEEeCC-CCceeEEEEcchhceeC
Confidence 9999 9999999999999988 5 7999999876643
No 455
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.73 E-value=8.5e-08 Score=91.58 Aligned_cols=211 Identities=23% Similarity=0.347 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCC--eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 022956 60 VLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHN--TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLH 137 (289)
Q Consensus 60 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~--~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh 137 (289)
..+....-|...+....|+|++..+.+.+..... ...+..+++..-++...++.-..++...++.+..++..++.++|
T Consensus 224 ~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 224 KEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHH
Confidence 3455667788888999999999988777654321 23446788888899999998888999999999999999999999
Q ss_pred cCCCCceecCCCCC---ceEEeCCCCcEEEe--ccCCccccCCccccccCCCCCCCCCCcccccC---CCCcchHHHHHH
Q 022956 138 THEPCIIHRDLNCS---NIFINGNIGQVKIG--DLGFAAIVGRSHAAHSIIGTPEYMAPELYEED---YTEMVDIYSFGL 209 (289)
Q Consensus 138 ~~~~~~~h~dl~~~---nili~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~Di~slG~ 209 (289)
+.. ..|.-+..+ +.-++.. +.+... ||+.+.................+.++|..... .+..+|+|++|.
T Consensus 304 ~~~--l~~v~L~~s~~~~~~~~~e-~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 304 SLS--LEHVVLSASSSKESTVDGE-GVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred Hhc--cceeEEecccccccccCcc-ceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHH
Confidence 987 666666555 4444444 566666 88888877666655555566677778865543 344579999999
Q ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCCCC
Q 022956 210 CLLEMVTMEIPYSECDSVAKIYKKVTGGVKPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDDDS 285 (289)
Q Consensus 210 il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~~~ 285 (289)
....+..|..+-..... ..............+++.+|+. ++++|+++.+++.|+|.+-......
T Consensus 381 l~~~~~~~~~i~~~~~~------------~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~ 445 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKSAV------------PVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNES 445 (1351)
T ss_pred HHhhhhhcCcccccccc------------hhhhhccccchhhhhhhhhhcchhhhhccchhhhhhchhccccccccc
Confidence 99999887543221110 0111112122267888999997 9999999999999999887655443
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.73 E-value=2.5e-07 Score=75.46 Aligned_cols=135 Identities=17% Similarity=0.204 Sum_probs=79.3
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCce--EEeeeeEEeCCCCeeEEEec
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYI--IVCYSVWLDDQHNTLNFITE 100 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~~~~~~~~~lv~e 100 (289)
..||+|..+.||+. .|..+++|...... . ...+.+|.++++.+..-++ ++.+.+. +..+...+||+
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~---~---~~~i~~E~~~l~~l~~~glpvP~~~~~~--~~~~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF---D---KETIKREFDASRKVFSLGIPTPHPFDLV--EDGGRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC---C---HHHHHHHHHHHHHHHHcCCCCCceEEEE--ecCCeeeeeee
Confidence 56899999999984 25578888886432 1 3446789999988875544 3444433 33356788999
Q ss_pred cccCCc-HHHH--------------HHh-----c----CCCCHHHHH-HHHH----------HHHHH-HHHH--hcCCCC
Q 022956 101 VCTSGN-LRTY--------------RKK-----H----RHVSIKALK-KWSK----------QVLEG-LEYL--HTHEPC 142 (289)
Q Consensus 101 ~~~~~s-L~~~--------------~~~-----~----~~l~~~~~~-~~~~----------ql~~~-l~~l--h~~~~~ 142 (289)
+++|.. +... +.. + ...+..... .+.. .+... ..+| +...+.
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 999963 2111 100 0 001111000 0000 00111 1111 122334
Q ss_pred ceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 143 IIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 143 ~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++|+|+.|.||+++++ + +.++||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~-~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGK-G-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCC-C-cEEEechhcC
Confidence 8999999999999987 6 9999998665
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.70 E-value=1.9e-07 Score=75.34 Aligned_cols=144 Identities=19% Similarity=0.187 Sum_probs=98.3
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCC--------------------HHHHHHHHHHHHHHHhCCCCce-
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSED--------------------PVLVNRLHSEVQLLRTLKNKYI- 80 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~~~e~~~l~~l~~~~i- 80 (289)
.--|++|.-+.||+|.. .++..+|+|+++....... ........+|...|+++...++
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34566788889999864 5689999999987433111 1122346778888888865543
Q ss_pred -EEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCceEEeCC
Q 022956 81 -IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHT-HEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 81 -~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~~~~~h~dl~~~nili~~~ 158 (289)
++.+.+. . -.+||||+.....---.-+.-++..+++..+..+++..+.-|-. .+ ++|+||+.-|||+. +
T Consensus 132 vP~Pi~~~--~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 132 VPEPIAFR--N----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNILVH-D 202 (268)
T ss_pred CCCceeec--C----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC--cccccchhhheEEE-C
Confidence 4445442 2 46799998664211111112234444788888888888888866 78 99999999999999 4
Q ss_pred CCcEEEeccCCccccCCc
Q 022956 159 IGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 159 ~~~~~l~d~g~~~~~~~~ 176 (289)
+.+.++|++.+.....+
T Consensus 203 -~~p~iID~~QaV~~~hp 219 (268)
T COG1718 203 -GEPYIIDVSQAVTIDHP 219 (268)
T ss_pred -CeEEEEECccccccCCC
Confidence 68999999988765533
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.61 E-value=4.1e-07 Score=72.62 Aligned_cols=66 Identities=18% Similarity=0.305 Sum_probs=52.4
Q ss_pred eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 94 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
..+++|||++|..|.+..+ +++ .+...+++++.-+|+.| ++|||.+|.|++++.+ .+++.|++...
T Consensus 117 ~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~--~i~iID~~~k~ 182 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNN--GIRIIDTQGKR 182 (229)
T ss_pred EEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEECC--cEEEEECcccc
Confidence 4678999999988877543 332 24455677789999999 9999999999999965 59999997554
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.60 E-value=8e-07 Score=68.04 Aligned_cols=136 Identities=23% Similarity=0.154 Sum_probs=97.1
Q ss_pred cccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeE
Q 022956 17 RFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 17 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 96 (289)
.--+..+.|+.|..|.||++.+. |..+|+|+-+.... +..+..|+++|..+...++.+-+..+ .. -.
T Consensus 22 ~~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~------r~~l~kEakiLeil~g~~~~p~vy~y--g~---~~ 88 (201)
T COG2112 22 YELRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP------RRNLEKEAKILEILAGEGVTPEVYFY--GE---DF 88 (201)
T ss_pred hhhhhhhhhhcccccEEEEeecc--CceEEEEEecCCcc------hhhHHHHHHHHHHhhhcCCCceEEEe--ch---hh
Confidence 33356688999999999999775 77999999875443 67889999999999888876655444 22 23
Q ss_pred EEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCC-C-CceEEeCCCCcEEEeccCCccccC
Q 022956 97 FITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLN-C-SNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 97 lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~-~-~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
+.|||+.|-+|.++-... +-.++ ..++++-.-|...| +-|+.|+ | .||++.+ +.+.|+||..|++..
T Consensus 89 i~me~i~G~~L~~~~~~~---~rk~l----~~vlE~a~~LD~~G--I~H~El~~~~k~vlv~~--~~~~iIDFd~At~k~ 157 (201)
T COG2112 89 IRMEYIDGRPLGKLEIGG---DRKHL----LRVLEKAYKLDRLG--IEHGELSRPWKNVLVND--RDVYIIDFDSATFKK 157 (201)
T ss_pred hhhhhhcCcchhhhhhcc---cHHHH----HHHHHHHHHHHHhc--cchhhhcCCceeEEecC--CcEEEEEccchhhcc
Confidence 459999998887766542 22333 33555555567778 9999886 3 4555554 489999999888554
Q ss_pred Cc
Q 022956 175 RS 176 (289)
Q Consensus 175 ~~ 176 (289)
.+
T Consensus 158 ~p 159 (201)
T COG2112 158 KP 159 (201)
T ss_pred CC
Confidence 33
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.57 E-value=1.5e-06 Score=70.98 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=55.1
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc--eEEeeeeEEeC-CCCeeEEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY--IIVCYSVWLDD-QHNTLNFI 98 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~-~~~~~~lv 98 (289)
.+.|+.|..+.||++.... ..+++|..... .....+.+|..+++.+.... ++.++...... .....+.+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~ 73 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLL 73 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEE
Confidence 4678999999999997653 59999997632 34567778888888885443 44555432222 22457889
Q ss_pred eccccCCcHHH
Q 022956 99 TEVCTSGNLRT 109 (289)
Q Consensus 99 ~e~~~~~sL~~ 109 (289)
|++++|.++..
T Consensus 74 ~~~i~g~~~~~ 84 (239)
T PF01636_consen 74 MEYIPGRPLDD 84 (239)
T ss_dssp EEEESSEEHHH
T ss_pred EEEeccccccc
Confidence 99999988777
No 461
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.55 E-value=6e-07 Score=81.14 Aligned_cols=144 Identities=17% Similarity=0.191 Sum_probs=91.5
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccC--------------------------CC----HHHHHH------HH
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS--------------------------ED----PVLVNR------LH 66 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--------------------------~~----~~~~~~------~~ 66 (289)
+-|+.++-|-||+|+.+ +|+.||||+.+..-.. +- .+..+. +.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 55899999999999976 5999999997652110 00 011222 23
Q ss_pred HHHHHHHhCC-----CCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 022956 67 SEVQLLRTLK-----NKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYR--KKHRHVSIKALKKWSKQVLEGLEYLHTH 139 (289)
Q Consensus 67 ~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 139 (289)
+|...+.+++ .+.+ .+=.+|.+-+ +.-.++|||++|..+.+.. .. ...+.+.+.....++.- ..+=..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v-~VP~V~we~t-~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~--~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPDV-YVPKVYWEYT-TRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFL--RQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCe-Eeceeehhcc-CCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHH--HHHHhc
Confidence 3333333332 2333 2223333212 2467899999999888874 33 34554444444333332 222236
Q ss_pred CCCceecCCCCCceEEeCCCCcEEEeccCCccccCC
Q 022956 140 EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGR 175 (289)
Q Consensus 140 ~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~ 175 (289)
| ++|.|.+|.||+++.+ |.+.+.|||+....+.
T Consensus 285 g--ffHaDpHpGNi~v~~~-g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 G--FFHADPHPGNILVRSD-GRIVLLDFGIVGRLDP 317 (517)
T ss_pred C--ccccCCCccceEEecC-CcEEEEcCcceecCCH
Confidence 7 9999999999999999 9999999999987754
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.31 E-value=5.7e-06 Score=74.76 Aligned_cols=151 Identities=14% Similarity=0.144 Sum_probs=92.8
Q ss_pred Cccccee-eeecccCcceEEEEeecCCCcEEEEEEeeecccCC---------------------------CHHHHHHHHH
Q 022956 16 GRFGRYS-DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE---------------------------DPVLVNRLHS 67 (289)
Q Consensus 16 ~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~---------------------------~~~~~~~~~~ 67 (289)
+-|..+. +-||..+.|.|++|+.+ +|+.||||+-+..-... -.+..+.+..
T Consensus 159 ~if~~f~~~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ 237 (538)
T KOG1235|consen 159 DIFSEFDEEPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQ 237 (538)
T ss_pred HHHHhcCcchhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHh
Confidence 3344444 56999999999999876 49999999965421100 0112222333
Q ss_pred HHHHH----------HhCCCCc------eEEeeeeEEeCCCCeeEEEeccccCCcHHHH--HHhcCCCCHHHHHHHHHHH
Q 022956 68 EVQLL----------RTLKNKY------IIVCYSVWLDDQHNTLNFITEVCTSGNLRTY--RKKHRHVSIKALKKWSKQV 129 (289)
Q Consensus 68 e~~~l----------~~l~~~~------i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~--~~~~~~l~~~~~~~~~~ql 129 (289)
|++++ +.+.|-+ |++++-.+ + ....++|||++|..+.|. +.+. .++...+..-+.++
T Consensus 238 ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~---s-t~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~ 312 (538)
T KOG1235|consen 238 ELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL---S-TKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEA 312 (538)
T ss_pred hcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc---C-cceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHH
Confidence 32222 2233433 33444332 2 347899999999866554 3333 36655444444443
Q ss_pred HHHHHHHhcCCCCceecCCCCCceEEeC---CCCcEEEeccCCccccCCc
Q 022956 130 LEGLEYLHTHEPCIIHRDLNCSNIFING---NIGQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 130 ~~~l~~lh~~~~~~~h~dl~~~nili~~---~~~~~~l~d~g~~~~~~~~ 176 (289)
..-+ +=..| ++|+|-+|.||++++ +...+.+.|+|+.......
T Consensus 313 ~~~q--If~~G--ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 313 YLEQ--IFKTG--FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHH--HHhcC--CccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 3322 23457 999999999999984 2378999999999876543
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.31 E-value=9.1e-06 Score=67.17 Aligned_cols=74 Identities=15% Similarity=0.065 Sum_probs=46.9
Q ss_pred ecccCc-ceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCC-CceEEeeeeEEeCCCCeeEEEeccc
Q 022956 25 LGSGAV-KKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKN-KYIIVCYSVWLDDQHNTLNFITEVC 102 (289)
Q Consensus 25 lg~g~~-g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~e~~ 102 (289)
|..|.. ..||++... +..+++|...... ...+.+|+++++.+.. --+++++..... ++..++||+++
T Consensus 6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~lv~e~i 74 (244)
T cd05150 6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP-------TYELEREAERLRWLAGKLPVPEVIDYGSD--DGRAWLLTSAV 74 (244)
T ss_pred cCCCCCcCeEEEEcCC--CCcEEEEecCCCc-------ccchHHHHHHHHHHHhcCCCCeEEEEEec--CCccEEEEEee
Confidence 444444 789999643 4678888876432 2345668888887743 223455544322 24578899999
Q ss_pred cCCcHHH
Q 022956 103 TSGNLRT 109 (289)
Q Consensus 103 ~~~sL~~ 109 (289)
+|.++..
T Consensus 75 ~G~~l~~ 81 (244)
T cd05150 75 PGVPAAA 81 (244)
T ss_pred CCccHhH
Confidence 9987754
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.29 E-value=8.1e-08 Score=86.49 Aligned_cols=244 Identities=19% Similarity=0.204 Sum_probs=155.7
Q ss_pred CCCCcccceeeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc-eEEeeeeEEeCC
Q 022956 13 DPSGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY-IIVCYSVWLDDQ 91 (289)
Q Consensus 13 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~ 91 (289)
+....+ ...+-.+.++++++++.+...+.... .+.+... ....-++++|.+++||| .+.-++.+ +.
T Consensus 239 Dk~kws-~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---------l~~rl~~eLLdK~n~P~~~v~~~~d~--~~ 305 (829)
T KOG0576|consen 239 DKTKWS-EFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---------LSRRLAIELLDKVNNPNPVVRYLEDY--DG 305 (829)
T ss_pred CCccch-HHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---------hhhHHHHHHHHHccCCCCcccccccC--Cc
Confidence 444444 56778999999999998776554444 5655432 23344788999999999 33333333 34
Q ss_pred CCeeEEEeccccCC-cHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 92 HNTLNFITEVCTSG-NLRTYRK-KHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 92 ~~~~~lv~e~~~~~-sL~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
..+.++.++++.++ +-...+. ....+.+-+...+.+.-..+++++|+.- -+|+| ||+... +..+..+++.
T Consensus 306 E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~--~~~~~~~~~v 377 (829)
T KOG0576|consen 306 EDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE--EEVKLLDFAV 377 (829)
T ss_pred ccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc--cccccccccC
Confidence 46889999999887 3222221 1123444555666777788899999875 46777 777655 4799999999
Q ss_pred ccccCCccccccCCCCCCCCCCcc-cccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhCCC-CCCCC--CC
Q 022956 170 AAIVGRSHAAHSIIGTPEYMAPEL-YEEDYTEMVDIYSFGLCLLEMVTMEIPYSECDSVAKIYKKVTGGV-KPQAL--NK 245 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~aPE~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~--~~ 245 (289)
+..+..........+++.++|||. ..+.+..+.|.|++|.-..++.-|-.|-........ .+..+. .+... ..
T Consensus 378 ~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~---~~g~~p~s~~L~~~~a 454 (829)
T KOG0576|consen 378 PPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVLP---MIGNGPNSPMLTDKSA 454 (829)
T ss_pred CcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCccccC---CCCCCCCccccchhhh
Confidence 988876666667789999999995 445588899999999877777777666543110000 000000 00000 00
Q ss_pred CCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 246 VKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 246 ~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
..+..-+++...|+. .|..|+.....+-|.+|.+=
T Consensus 455 w~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 455 WSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred cCcccccCCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 001111245667777 78888888888888777653
No 465
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.23 E-value=1e-05 Score=66.53 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=43.9
Q ss_pred eeecccCcc-eEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCC---ceEEeeeeEEeCCC-CeeEE
Q 022956 23 DLLGSGAVK-KVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK---YIIVCYSVWLDDQH-NTLNF 97 (289)
Q Consensus 23 ~~lg~g~~g-~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~-~~~~l 97 (289)
+-|+.|+.. .||++ +..+++|..+.. .....+.+|.++++.+... .++..+......+. ...++
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~------~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA------GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCcc------chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 457766666 58987 235777765431 1234688899999888642 23333332211111 23478
Q ss_pred EeccccCCcH
Q 022956 98 ITEVCTSGNL 107 (289)
Q Consensus 98 v~e~~~~~sL 107 (289)
+|++++|.++
T Consensus 72 l~~~i~G~~l 81 (235)
T cd05155 72 VYRWLEGETA 81 (235)
T ss_pred EEEeecCCCC
Confidence 8999999766
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.18 E-value=3.7e-05 Score=74.52 Aligned_cols=149 Identities=17% Similarity=0.259 Sum_probs=88.0
Q ss_pred eeeecccCcceEEEEeecCCC--cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC-CCce--EEeeeeEEeCC-CCee
Q 022956 22 SDLLGSGAVKKVYRAFDQEEG--IEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK-NKYI--IVCYSVWLDDQ-HNTL 95 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i--~~~~~~~~~~~-~~~~ 95 (289)
.+.|+.|.+..+|++.....+ ..+++|+........ ....+.+|+++++.+. |+++ ++++..+.+.+ .+..
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~---~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ---SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 567899999999998764332 467788765432211 1346778999999995 6665 45554442221 1356
Q ss_pred EEEeccccCCcHHH--------------------HHHh-c----C--CC---------CHHHHHHHHHH-----------
Q 022956 96 NFITEVCTSGNLRT--------------------YRKK-H----R--HV---------SIKALKKWSKQ----------- 128 (289)
Q Consensus 96 ~lv~e~~~~~sL~~--------------------~~~~-~----~--~l---------~~~~~~~~~~q----------- 128 (289)
++|||+++|..+.+ .+.. + . .+ ...++..|..+
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 78999999865321 1110 0 0 00 01233332222
Q ss_pred ----HHHHHHHHhcCC---------CCceecCCCCCceEEeCCCC-cEEEeccCCcccc
Q 022956 129 ----VLEGLEYLHTHE---------PCIIHRDLNCSNIFINGNIG-QVKIGDLGFAAIV 173 (289)
Q Consensus 129 ----l~~~l~~lh~~~---------~~~~h~dl~~~nili~~~~~-~~~l~d~g~~~~~ 173 (289)
+...+.+|..+- +.++|+|+++.||+++++.+ ..-+.||+++..-
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 223345553321 23999999999999986423 3579999987643
No 467
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.16 E-value=3.2e-05 Score=66.12 Aligned_cols=143 Identities=20% Similarity=0.267 Sum_probs=104.8
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeeccc--------------------CCCH--HHHHHHHHHHHHHHhCCCCce
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF--------------------SEDP--VLVNRLHSEVQLLRTLKNKYI 80 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~--------------------~~~~--~~~~~~~~e~~~l~~l~~~~i 80 (289)
.-|.+|--+.||.|.. .+|..+|||+++.+-+ ..++ -..-....|+..|.+|....|
T Consensus 150 GCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI 228 (520)
T KOG2270|consen 150 GCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI 228 (520)
T ss_pred cccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3367888899999974 5789999999876321 0111 123347788999999988876
Q ss_pred EEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hcCCCCceecCCCCCceEEeCCC
Q 022956 81 IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYL-HTHEPCIIHRDLNCSNIFINGNI 159 (289)
Q Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~l-h~~~~~~~h~dl~~~nili~~~~ 159 (289)
+..--+.+.. -.|||+|+.........-+...++...+..+-.+++.-+.-| +..+ ++|.||+-=|+|+..
T Consensus 229 P~PePIlLk~----hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVHADLSEfN~Lyhd-- 300 (520)
T KOG2270|consen 229 PCPEPILLKN----HVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCR--LVHADLSEFNLLYHD-- 300 (520)
T ss_pred CCCCceeeec----ceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhc--eeccchhhhhheEEC--
Confidence 6444444333 578999997644444444456688888999999998888888 6668 999999999999986
Q ss_pred CcEEEeccCCccccC
Q 022956 160 GQVKIGDLGFAAIVG 174 (289)
Q Consensus 160 ~~~~l~d~g~~~~~~ 174 (289)
|.++++|.+.+....
T Consensus 301 G~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 301 GKLYIIDVSQSVEHD 315 (520)
T ss_pred CEEEEEEccccccCC
Confidence 589999998776544
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.06 E-value=0.00015 Score=57.62 Aligned_cols=136 Identities=21% Similarity=0.294 Sum_probs=90.8
Q ss_pred eeecccCcceEEEEeecCCCcEEEEEEeeecccCC------------CHHHHHHHHHHHHHHHhCC------CCceEEee
Q 022956 23 DLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSE------------DPVLVNRLHSEVQLLRTLK------NKYIIVCY 84 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~------------~~~~~~~~~~e~~~l~~l~------~~~i~~~~ 84 (289)
..||+|+.-.||.- ..+....||+........ .....+...+|++....+. +.+|..++
T Consensus 7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46999999999986 345677899988765000 0112455566666666665 77889999
Q ss_pred eeEEeCCCCeeEEEeccccC------CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCC
Q 022956 85 SVWLDDQHNTLNFITEVCTS------GNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGN 158 (289)
Q Consensus 85 ~~~~~~~~~~~~lv~e~~~~------~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~ 158 (289)
|...++ ....+|+|.+.. .+|.+++.++ .++. ...+.+.++.. +|-+.+ ++.+|++|.||++..+
T Consensus 84 G~veT~--~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~~~L~~f~~---~l~~~~--Iv~~dl~~~NIv~~~~ 154 (199)
T PF10707_consen 84 GFVETN--LGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-ELRQALDEFKR---YLLDHH--IVIRDLNPHNIVVQRR 154 (199)
T ss_pred EEEecC--CceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HHHHHHHHHHH---HHHHcC--CeecCCCcccEEEEec
Confidence 988554 457778887544 2688888654 3665 55555555444 566777 9999999999999544
Q ss_pred C-C--cEEEec-cCCc
Q 022956 159 I-G--QVKIGD-LGFA 170 (289)
Q Consensus 159 ~-~--~~~l~d-~g~~ 170 (289)
. + .++++| ||..
T Consensus 155 ~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 155 DSGEFRLVLIDGLGEK 170 (199)
T ss_pred CCCceEEEEEeCCCCc
Confidence 2 2 467776 4433
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.99 E-value=0.0001 Score=60.53 Aligned_cols=75 Identities=12% Similarity=0.062 Sum_probs=46.3
Q ss_pred eeecccCcceEEEEeecC-CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEecc
Q 022956 23 DLLGSGAVKKVYRAFDQE-EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEV 101 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 101 (289)
+.|..|-...+|++.... ++..|++|+...... . .-...+|+.+++.+...++.+-+-.. ... .+++||
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~-~~d~~~E~~~~~~l~~~gl~P~v~~~-~~~----~~l~e~ 73 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----L-IIDRERELRIHKLLSKHGLAPKLYAT-FQN----GLIYEF 73 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----c-eecHHHHHHHHHHHHhCCCCCeEEEE-eCC----cEEEEe
Confidence 567888888999996432 357899997753211 1 11234688888888654444332112 121 369999
Q ss_pred ccCCcH
Q 022956 102 CTSGNL 107 (289)
Q Consensus 102 ~~~~sL 107 (289)
++|.++
T Consensus 74 i~G~~l 79 (235)
T cd05157 74 IPGRTL 79 (235)
T ss_pred eCCCcC
Confidence 999765
No 470
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.98 E-value=0.00014 Score=57.60 Aligned_cols=128 Identities=19% Similarity=0.299 Sum_probs=87.2
Q ss_pred ceeeeecccCc-ceEEEEeecCCCcEEEEEEeeecccC----------CCH-------HHHHHHHHHHHHHHhCCC---C
Q 022956 20 RYSDLLGSGAV-KKVYRAFDQEEGIEVAWNQVRLSHFS----------EDP-------VLVNRLHSEVQLLRTLKN---K 78 (289)
Q Consensus 20 ~~~~~lg~g~~-g~v~~~~~~~~~~~~aiK~~~~~~~~----------~~~-------~~~~~~~~e~~~l~~l~~---~ 78 (289)
++.+.||.|.- |.||++.. +|..||+|+++.-... ..+ ....-|..|.+...+|+. .
T Consensus 40 ~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e 117 (207)
T PF13095_consen 40 EFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGRE 117 (207)
T ss_pred eeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcccc
Confidence 57899999999 99999976 4889999994431111 011 223457788887777754 4
Q ss_pred ce--EEeeeeEEeCC----------------CCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 022956 79 YI--IVCYSVWLDDQ----------------HNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHE 140 (289)
Q Consensus 79 ~i--~~~~~~~~~~~----------------~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~ 140 (289)
++ ++++++..-+. .....||.||++... .++...+ .+|.+-+..+|+.|
T Consensus 118 ~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~~----~~~~~dl~~~~k~g 184 (207)
T PF13095_consen 118 GLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRDI----PQMLRDLKILHKLG 184 (207)
T ss_pred CceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhHH----HHHHHHHHHHHHCC
Confidence 45 88888774321 113466777776532 3444444 44666677799999
Q ss_pred CCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 141 PCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 141 ~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
++-+|+++.|.. .-+|+|||.+
T Consensus 185 --I~~~Dv~~~ny~------~G~lvDfs~~ 206 (207)
T PF13095_consen 185 --IVPRDVKPRNYR------GGKLVDFSSS 206 (207)
T ss_pred --eeeccCcccccc------CCEEEecccC
Confidence 999999999987 3578899854
No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.96 E-value=0.00027 Score=60.23 Aligned_cols=78 Identities=10% Similarity=0.030 Sum_probs=52.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCC---ceEEeeeeEEeC-CCCeeEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNK---YIIVCYSVWLDD-QHNTLNF 97 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~-~~~~~~l 97 (289)
.+-||+|..+.||+.... +..+++|..+.... ...+..|...|+.|... .++++++.+... ..+.-++
T Consensus 19 ~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~~~~------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 19 VECISEQPYAALWALYDS--QGNPMPLMARSFST------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred eeecCCccceeEEEEEcC--CCCEEEEEeccccc------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 456999999999998542 33577777543111 25677888988888542 456666654322 2245789
Q ss_pred EeccccCCcH
Q 022956 98 ITEVCTSGNL 107 (289)
Q Consensus 98 v~e~~~~~sL 107 (289)
|||+++|.++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998754
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.92 E-value=5.4e-05 Score=63.08 Aligned_cols=133 Identities=18% Similarity=0.236 Sum_probs=74.5
Q ss_pred ecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCeeEEEecccc
Q 022956 25 LGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNFITEVCT 103 (289)
Q Consensus 25 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~e~~~ 103 (289)
+..|....+|++. .++..+++|....... ..--...+|..+++.+....+. +++.. .. -++|+||++
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~----~~~~~r~~E~~~l~~l~~~g~~P~~i~~--~~----~~~v~e~i~ 71 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCK----ALGVDRQREYQILQALSALGLAPKPILV--NE----HWLLVEWLE 71 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccc----cccCcHHHHHHHHHHHHhcCCCCceEEE--eC----CEEEEEecc
Confidence 5667778899885 4577888987653211 1101246688888888654443 33322 22 257899999
Q ss_pred CCcHHHH--------------HHh-------cCCCCHH-HHHHHHHHH---------HHHHHHHhcC------CCCceec
Q 022956 104 SGNLRTY--------------RKK-------HRHVSIK-ALKKWSKQV---------LEGLEYLHTH------EPCIIHR 146 (289)
Q Consensus 104 ~~sL~~~--------------~~~-------~~~l~~~-~~~~~~~ql---------~~~l~~lh~~------~~~~~h~ 146 (289)
|..+... +.+ ..+++.. .+.....++ ...+..+... ...++|+
T Consensus 72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~ 151 (256)
T TIGR02721 72 GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHM 151 (256)
T ss_pred CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecC
Confidence 9765321 111 0111211 111211111 1112222111 1238999
Q ss_pred CCCCCceEEeCCCCcEEEeccCCcc
Q 022956 147 DLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 147 dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
|+.|.||+++++ + +.++||+.+.
T Consensus 152 Dl~~~Nil~~~~-~-~~lIDwE~a~ 174 (256)
T TIGR02721 152 DVHAYNLVVTPQ-G-LKLIDWEYAS 174 (256)
T ss_pred CCCcCcEEEeCC-C-CEEEeccccC
Confidence 999999999987 5 8899998665
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.86 E-value=0.00065 Score=59.92 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=52.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeeccc--CCC-HHHHHHHHHHHHHHHhCC---CCceEEeeeeEEeCCCCee
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF--SED-PVLVNRLHSEVQLLRTLK---NKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~--~~~-~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~ 95 (289)
.+.||.|.+..||++.+...++.++||.-..... .+. +...++...|.+.|+.+. ..++++++.+ ++ ...
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~--~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE--ELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC--CCC
Confidence 3679999999999998864336899998541100 011 123566777888888763 2345556654 22 346
Q ss_pred EEEeccccCCc
Q 022956 96 NFITEVCTSGN 106 (289)
Q Consensus 96 ~lv~e~~~~~s 106 (289)
++|||++++..
T Consensus 107 ~lVME~L~~~~ 117 (401)
T PRK09550 107 VTVMEDLSDHK 117 (401)
T ss_pred EEEEecCCCcc
Confidence 78999998743
No 474
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.76 E-value=5.8e-06 Score=81.57 Aligned_cols=215 Identities=16% Similarity=0.064 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHh
Q 022956 62 VNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKH----RHVSIKALKKWSKQVLEGLEYLH 137 (289)
Q Consensus 62 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh 137 (289)
.+....|...++...|+++.....-....++...+..++++.+|.+++.+.++ .++....+.....+.+....-+|
T Consensus 1273 kemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~l 1352 (2724)
T KOG1826|consen 1273 KEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVIL 1352 (2724)
T ss_pred HHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhh
Confidence 44455566667778898887776655555566788899999999999998764 44555555555555455555544
Q ss_pred cC---CCCceecCCCCCceEEeCCCCcEEEeccCCcccc-CCccccccCCCCCCCCCCcccccC-CCCcchHHHHHHHHH
Q 022956 138 TH---EPCIIHRDLNCSNIFINGNIGQVKIGDLGFAAIV-GRSHAAHSIIGTPEYMAPELYEED-YTEMVDIYSFGLCLL 212 (289)
Q Consensus 138 ~~---~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~-~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~Di~slG~il~ 212 (289)
+. |--.+|.++++.|.++..+ .++++.++|+.+.. ..........+++-|+.|++...- ++.++|+|.+|+.+|
T Consensus 1353 s~tnlg~T~v~~~Lkf~lpmIVtn-y~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly 1431 (2724)
T KOG1826|consen 1353 SLTNLGNTNVSKSLKFTLPMIVTN-YNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLY 1431 (2724)
T ss_pred hcccCCccchhhhhhhhccceecC-CcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 43 2236899999999999999 68999999999833 322233344556666777765544 777799999999999
Q ss_pred HHHhCCCCCCCCCcHHHHHHHHhCCC----CCCCCCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccCCCC
Q 022956 213 EMVTMEIPYSECDSVAKIYKKVTGGV----KPQALNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSELNDD 283 (289)
Q Consensus 213 ~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~~~~ 283 (289)
....|..+|- ...+...++. .-..+....|.........+|- .-..||.-..++..+.|.-...+
T Consensus 1432 ~rs~~n~~fi------~flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~~~~d 1501 (2724)
T KOG1826|consen 1432 LRSDGNAYFI------FFLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFAVGLRD 1501 (2724)
T ss_pred HHhcccHHHH------HHHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhcccccccccccC
Confidence 9988887763 2222222221 2222233333444444444444 67778888888887666554433
No 475
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.76 E-value=0.00012 Score=57.87 Aligned_cols=101 Identities=21% Similarity=0.171 Sum_probs=77.2
Q ss_pred HHHHHHHhCCC-CceEEeeeeEEeCCCCeeEEEeccccCCcHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHhcCCC-
Q 022956 67 SEVQLLRTLKN-KYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTY---RKKHRHVSIKALKKWSKQVLEGLEYLHTHEP- 141 (289)
Q Consensus 67 ~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~---~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~- 141 (289)
.|.-+++.+.+ +++++++|.+ . -.++.|+...+++.+. +.+--..++..+.+++.+++..+.+++..-.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C--G----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC--G----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC--C----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 47777888876 6899999987 2 2447899987666431 2222335889999999999999999977411
Q ss_pred CceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 142 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
.+.-.|++++|+-++.+ +++|++|.+.+....
T Consensus 82 ~~~lcDv~~~nfgv~~~-~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDD-GRLKLIDLDDVFVED 113 (188)
T ss_pred cEEEeecchHHeEEeCC-CcEEEEechhcchhH
Confidence 16779999999999988 899999998876553
No 476
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.67 E-value=4.2e-05 Score=64.39 Aligned_cols=141 Identities=18% Similarity=0.218 Sum_probs=95.3
Q ss_pred ceeeeecccCcceEEEEeecCCCcEEEEEEeeecccC--C---CH-------------HHHHHHHHHHHHHHhCCCCce-
Q 022956 20 RYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFS--E---DP-------------VLVNRLHSEVQLLRTLKNKYI- 80 (289)
Q Consensus 20 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~-------------~~~~~~~~e~~~l~~l~~~~i- 80 (289)
-++.+||=|--+.||.+.+ +.|.++++|.=+..+.. . +. -.+-...+|..+++.|....+
T Consensus 95 svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 95 SVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 3578899999999999976 46888888875443221 0 00 012235667888888865443
Q ss_pred -EEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCC
Q 022956 81 -IVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNI 159 (289)
Q Consensus 81 -~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~ 159 (289)
++.+++ +..++|||++.|..|.....- .... .+...++.-+--|..+| ++|+|++-=||+++++
T Consensus 174 VPkpiD~------~RH~Vvmelv~g~Pl~~v~~v---~d~~---~ly~~lm~~Iv~la~~G--lIHgDFNEFNimv~dd- 238 (465)
T KOG2268|consen 174 VPKPIDH------NRHCVVMELVDGYPLRQVRHV---EDPP---TLYDDLMGLIVRLANHG--LIHGDFNEFNIMVKDD- 238 (465)
T ss_pred CCCcccc------cceeeHHHhhcccceeeeeec---CChH---HHHHHHHHHHHHHHHcC--ceecccchheeEEecC-
Confidence 333432 457889999999888765432 1222 33344444555677899 9999999999999987
Q ss_pred CcEEEeccCCccccCCc
Q 022956 160 GQVKIGDLGFAAIVGRS 176 (289)
Q Consensus 160 ~~~~l~d~g~~~~~~~~ 176 (289)
+.++++||..+...+.+
T Consensus 239 ~~i~vIDFPQmvS~sh~ 255 (465)
T KOG2268|consen 239 DKIVVIDFPQMVSTSHP 255 (465)
T ss_pred CCEEEeechHhhccCCC
Confidence 79999999776554433
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.63 E-value=0.00048 Score=58.62 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=77.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc--eEEeeee----EEeCCCCee
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY--IIVCYSV----WLDDQHNTL 95 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~----~~~~~~~~~ 95 (289)
.+.|..|....+|++.. ++..+++|+.... . ...+..|+.++..+.+.+ +++++.. ....-++..
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~----~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKV----S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCCC----C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 35577787789999853 3557999987641 1 234555777777774333 3333321 111112356
Q ss_pred EEEeccccCCcHHH-----H------HH------hc--CC-----C-CHHHH--H--------HHHHHHHHHHHHHhc--
Q 022956 96 NFITEVCTSGNLRT-----Y------RK------KH--RH-----V-SIKAL--K--------KWSKQVLEGLEYLHT-- 138 (289)
Q Consensus 96 ~lv~e~~~~~sL~~-----~------~~------~~--~~-----l-~~~~~--~--------~~~~ql~~~l~~lh~-- 138 (289)
+.|+++++|..+.. . +. .+ .. . ..... . .....+..++..+.+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 78999999976421 0 00 00 00 0 00000 0 001112233344432
Q ss_pred ---CCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 139 ---HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 139 ---~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
....++|+|+.|.||+++.+ +.+.|.||+.+.
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~ 204 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGD-ELSGVIDFYFAC 204 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCC-ceEEEeehhhhc
Confidence 11139999999999999987 667899997654
No 478
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.62 E-value=0.0002 Score=63.91 Aligned_cols=163 Identities=20% Similarity=0.274 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 022956 63 NRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPC 142 (289)
Q Consensus 63 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~ 142 (289)
..+.-...+++.+.|++....+.+... ...+..+|+|++. .||.+.+..+. +-..... .++
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~-~~~r~IVV~e~~~-~Sled~~~~~~-l~~~s~~--------------~~~-- 87 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRG-KHERVIVVMEHYT-MSLEDILKTGN-LKDESLL--------------AHG-- 87 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecC-ccceEEEEehhhc-cchHHHHHhcc-cchhhhc--------------ccc--
Confidence 456677899999999999998876544 3456888999995 49999988754 3222222 122
Q ss_pred ceecCCCCCceEEeCCCCcEEEeccCCccccCCccccccCCCCCCCCCCcccccCCCCcchHHHHHHHHHHHHhCCCCCC
Q 022956 143 IIHRDLNCSNIFINGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGLCLLEMVTMEIPYS 222 (289)
Q Consensus 143 ~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Di~slG~il~~l~tg~~p~~ 222 (289)
+.|- +.++.+| .+++.. |- ...+++|||++|.++.++.-|..-+.
T Consensus 88 ~~~~-------------~~~~~td-~~~t~~-----------------~~----~~~pKsdVwsl~~i~~el~L~~~l~~ 132 (725)
T KOG1093|consen 88 VLHL-------------NIIYITD-HFLTKY-----------------PS----PIGPKSDVWSLGFIILELYLGISLEA 132 (725)
T ss_pred ccee-------------hhhhccc-cccccC-----------------CC----CCCcchhhhhHHHHHHHHHHhhHHHH
Confidence 2222 2333333 111100 00 01258999999999999999877765
Q ss_pred CCCcHHHHHHHHhCC-CCCCC---------CCCCCChHHHHHHHHHHc-CCCCCCCHHHHhcCcccccC
Q 022956 223 ECDSVAKIYKKVTGG-VKPQA---------LNKVKDPEVKAFIEKCIA-QPRARPSASELLKDPFFSEL 280 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~li~~~l~-dp~~Rps~~~il~h~~~~~~ 280 (289)
.....+.. ..+.+. ..+.. ..--.+....++..+|+. .|..||...++.+++-|++.
T Consensus 133 ~~~~s~~l-~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 133 ELTESEYL-EILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred HHHHHHHH-HHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 43333222 222221 11111 011135566788889997 99999999999998887653
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.46 E-value=0.0018 Score=55.22 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=45.6
Q ss_pred eeecccCcceEEEEeecC------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCee
Q 022956 23 DLLGSGAVKKVYRAFDQE------EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTL 95 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~ 95 (289)
+.|..|-.-.+|++.... +++.+++|+...... ......+|.++++.+...++. +++..+ .+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~~r~~E~~~~~~l~~~g~~P~~~~~~--~~---- 72 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-----LLIDRERELVVFARLSERNLGPKLYGIF--PN---- 72 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-----ceechHHHHHHHHHHHhCCCCCceEEEe--CC----
Confidence 446666666888886532 268899999764321 123456688888887654443 333332 22
Q ss_pred EEEeccccCCcHH
Q 022956 96 NFITEVCTSGNLR 108 (289)
Q Consensus 96 ~lv~e~~~~~sL~ 108 (289)
..|++|++|.++.
T Consensus 73 ~~v~e~i~G~~l~ 85 (302)
T cd05156 73 GRIEEFIPSRTLT 85 (302)
T ss_pred CchhheeCCCcCC
Confidence 2478999887653
No 480
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.46 E-value=0.0018 Score=55.43 Aligned_cols=141 Identities=15% Similarity=0.118 Sum_probs=75.3
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc--eEEeeee----EEeCCCCee
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY--IIVCYSV----WLDDQHNTL 95 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~----~~~~~~~~~ 95 (289)
.+.++.|....+|++.. ++..+++|+..... .. ..+..++.++..|...+ +++++.. ....-++..
T Consensus 27 i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~---~~---~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~ 98 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT--DVGRYILTLYEKRV---KA---EELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKP 98 (307)
T ss_pred ccccCCccccceEEEEe--CCCcEEEEEecCCC---CH---HHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeE
Confidence 34567777788999853 34468889875421 12 23344566666664322 2333321 111123457
Q ss_pred EEEeccccCCcHH-----HH------HHh----cCCC--------CHH---HH-H-----------HHHHHHHHHHHHHh
Q 022956 96 NFITEVCTSGNLR-----TY------RKK----HRHV--------SIK---AL-K-----------KWSKQVLEGLEYLH 137 (289)
Q Consensus 96 ~lv~e~~~~~sL~-----~~------~~~----~~~l--------~~~---~~-~-----------~~~~ql~~~l~~lh 137 (289)
+++++|++|..+. .+ +.. ...+ ... .. . .....+...+.++.
T Consensus 99 ~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~ 178 (307)
T TIGR00938 99 ACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLD 178 (307)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHH
Confidence 8899999985431 11 100 0000 000 00 0 00111223444443
Q ss_pred c-----CCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 138 T-----HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 138 ~-----~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
. ...+++|+|+++.||+++.+ +.+.+.||+.+.
T Consensus 179 ~~~~~~~~~~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~ 216 (307)
T TIGR00938 179 KFWPRDLPRGVIHADLFPDNVLFDGD-SVKGVIDFYFAC 216 (307)
T ss_pred hhhhhcCCCccCCCCCCcCcEEEECC-ceEEEeeccccc
Confidence 2 11239999999999999988 667899998654
No 481
>PRK05231 homoserine kinase; Provisional
Probab=97.43 E-value=0.0054 Score=52.79 Aligned_cols=28 Identities=32% Similarity=0.482 Sum_probs=24.3
Q ss_pred ceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 143 IIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 143 ~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++|+|+.+.||+++.+ ...-++||+.+.
T Consensus 189 liHgD~~~~Nil~~~~-~~~~iIDf~~~~ 216 (319)
T PRK05231 189 VIHADLFRDNVLFEGD-RLSGFIDFYFAC 216 (319)
T ss_pred cCCCCCCCCcEEEECC-ceEEEEeccccc
Confidence 9999999999999966 456899998765
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.41 E-value=0.0024 Score=54.46 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=78.7
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE--EeeeeEEeCCCCeeEEEe
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII--VCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~~~~~~~~lv~ 99 (289)
.+.+..|..-.+|..... ++.++++ ... ............+|+.+++.+..--+. ..++.+.+..-...+.||
T Consensus 30 v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~--~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~ 104 (321)
T COG3173 30 VEEISGGWSNDTFRLGDT--GQKYVLR-KPP--RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM 104 (321)
T ss_pred eeeccCCcccceEEEecC--CceEEEe-cCC--ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence 344434444455555443 8889888 321 111233456677888888888643332 333333222113568899
Q ss_pred ccccCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHh-----------------------------------------
Q 022956 100 EVCTSGNLRTYRKKHRHVSIKALKKWS-KQVLEGLEYLH----------------------------------------- 137 (289)
Q Consensus 100 e~~~~~sL~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lh----------------------------------------- 137 (289)
+|++|..+.+.... .+ ...+.+ ..+...|.-||
T Consensus 105 ~~veGe~~~~~~~~---~~--~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~ 179 (321)
T COG3173 105 EWVEGEVVWSALPP---ES--LGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL 179 (321)
T ss_pred EEecceeccCcCCc---cc--chHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence 99999433221110 00 001111 13333333333
Q ss_pred ---------cCCC------CceecCCCCCceEEeCCCCcEEEeccCCccccC
Q 022956 138 ---------THEP------CIIHRDLNCSNIFINGNIGQVKIGDLGFAAIVG 174 (289)
Q Consensus 138 ---------~~~~------~~~h~dl~~~nili~~~~~~~~l~d~g~~~~~~ 174 (289)
.+.+ .++|||+.+.|++++++ +-+-+.||+++..-.
T Consensus 180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~-~~~gVlDwe~~~lGD 230 (321)
T COG3173 180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPG-RPTGVLDWELATLGD 230 (321)
T ss_pred HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCC-CeeEEEeccccccCC
Confidence 2222 59999999999999998 569999999887543
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.31 E-value=0.0037 Score=52.65 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=24.2
Q ss_pred CceecCCCCCceEEeCCCCc-EEEeccCCcc
Q 022956 142 CIIHRDLNCSNIFINGNIGQ-VKIGDLGFAA 171 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~~~-~~l~d~g~~~ 171 (289)
.++|+|+++.||+++.+ +. .-|.||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~-~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDED-ARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCC-CCEEEEECcHhcc
Confidence 48999999999999975 44 5699998665
No 484
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.23 E-value=0.0061 Score=52.89 Aligned_cols=84 Identities=18% Similarity=0.184 Sum_probs=50.0
Q ss_pred eecccCcceEEEEeecCCCcEEEEEEeeecc--cCCC-HHHHHHHHHHHHHHHhCCC--Cc-eEEeeeeEEeCCCCeeEE
Q 022956 24 LLGSGAVKKVYRAFDQEEGIEVAWNQVRLSH--FSED-PVLVNRLHSEVQLLRTLKN--KY-IIVCYSVWLDDQHNTLNF 97 (289)
Q Consensus 24 ~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~--~~~~-~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~~~l 97 (289)
.||.|....||++.+...++.++||.-..-- ..++ +-..++..-|...|+.... |. +++++. + ++ ....+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~-~-D~--e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH-F-DT--EMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE-E-cc--cccee
Confidence 4799999999999875444689998743211 0111 2234555667777777642 54 444443 3 22 34567
Q ss_pred EeccccCC-cHHHHH
Q 022956 98 ITEVCTSG-NLRTYR 111 (289)
Q Consensus 98 v~e~~~~~-sL~~~~ 111 (289)
+||+++.. .|.+.+
T Consensus 78 vMEdL~~~~ilR~~L 92 (370)
T TIGR01767 78 VMEDLSHHKIARKGL 92 (370)
T ss_pred hHhhCccchHHHHHH
Confidence 89998654 344444
No 485
>PLN02236 choline kinase
Probab=97.16 E-value=0.0036 Score=54.55 Aligned_cols=138 Identities=16% Similarity=0.197 Sum_probs=77.7
Q ss_pred eeecccCcceEEEEeecC----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCeeEE
Q 022956 23 DLLGSGAVKKVYRAFDQE----EGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNF 97 (289)
Q Consensus 23 ~~lg~g~~g~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~l 97 (289)
+.|..|-.-.+|++.... +++.|++|+..... +..+.+ .+|..+++.+...++. ++++.+ .. . .
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t----~~~idR-~~E~~~~~~l~~~gl~P~~~~~~--~~-g---~ 110 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV----ELFFDR-DDEIRTFECMSRHGQGPRLLGRF--PN-G---R 110 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC----Ceeech-HHHHHHHHHHHHcCCCCceEEEE--CC-c---e
Confidence 456567777899986432 24689999886432 222222 6688888888765554 334333 22 2 3
Q ss_pred EeccccCCcHHHH--------------HHh---cC------CCCHHHHHHHHHHH-----------------HHHHHH--
Q 022956 98 ITEVCTSGNLRTY--------------RKK---HR------HVSIKALKKWSKQV-----------------LEGLEY-- 135 (289)
Q Consensus 98 v~e~~~~~sL~~~--------------~~~---~~------~l~~~~~~~~~~ql-----------------~~~l~~-- 135 (289)
|++|++|.+|... +.+ .. ......+..+..++ ...+..
T Consensus 111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~ 190 (344)
T PLN02236 111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE 190 (344)
T ss_pred EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence 7888887665311 110 00 01112233332221 111111
Q ss_pred --Hhc--CCCCceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 136 --LHT--HEPCIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 136 --lh~--~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
+.. ....++|+|+++.||+++.+.+.+.++||+.+.
T Consensus 191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 111 112389999999999998643689999998765
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.11 E-value=0.0086 Score=52.89 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=48.2
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeeccc-CCC--HHHHHHHHHHHHHHHhCC---CCceEEeeeeEEeCCCCee
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHF-SED--PVLVNRLHSEVQLLRTLK---NKYIIVCYSVWLDDQHNTL 95 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-~~~--~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~ 95 (289)
.+.||.|..-.||++.+. +..++||.-..... ... +....+...|+..|+.+. ...+++++.+. + ..-
T Consensus 37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d--e--d~~ 110 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD--R--TMA 110 (418)
T ss_pred EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC--C--CCC
Confidence 577999999999999763 55788988652111 000 112344445677776664 23566666553 2 335
Q ss_pred EEEeccccC
Q 022956 96 NFITEVCTS 104 (289)
Q Consensus 96 ~lv~e~~~~ 104 (289)
+++||++++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 778999977
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.10 E-value=0.0046 Score=54.28 Aligned_cols=86 Identities=22% Similarity=0.308 Sum_probs=53.0
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeec-ccCCC-HHHHHHHHHHHHHHHhCCC--Cc-eEEeeeeEEeCCCCeeE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLS-HFSED-PVLVNRLHSEVQLLRTLKN--KY-IIVCYSVWLDDQHNTLN 96 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~-~~~~~-~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~~~ 96 (289)
.+.||.|.-..||++.+...+..++||.-..- +...+ +-..++..-|...|+.+.. |. +++++. + ++ ....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~-~-D~--e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL-F-DS--VMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-E-Cc--HHhh
Confidence 46789999999999987544678999874321 11111 3335666668788877642 54 444543 3 22 4566
Q ss_pred EEeccccCC-cHHHHH
Q 022956 97 FITEVCTSG-NLRTYR 111 (289)
Q Consensus 97 lv~e~~~~~-sL~~~~ 111 (289)
+|||+++.. .|.+.+
T Consensus 110 ~vMEdL~~~~ilR~~L 125 (409)
T PRK12396 110 CVMEDLSDHTILRTAL 125 (409)
T ss_pred HHHHhCcccHHHHHHH
Confidence 789998653 344443
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.96 E-value=0.0058 Score=52.94 Aligned_cols=140 Identities=14% Similarity=0.208 Sum_probs=76.3
Q ss_pred eeeecccCcceEEEEeecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCeeEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEE---GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNF 97 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~l 97 (289)
.+.|..|-.-.+|++..... +..|++|+..... +. .-.-.+|..+++.+...++- ++++.+ .. . +
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t----~~-~IdR~~E~~il~~l~~~gl~P~~l~~~--~~-G---~ 87 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT----DY-VIDRERELQAIKYLSAAGFGAKLLGVF--GN-G---M 87 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCc----Ce-EechHHHHHHHHHHHhcCCCCceeEEe--CC-c---E
Confidence 34555577777888864322 3478899876421 11 12225688888888765554 334333 22 1 4
Q ss_pred EeccccCCcHHH-------HH-------Hh--c-C-C----C-CHHHHHHHHHHH-------------------------
Q 022956 98 ITEVCTSGNLRT-------YR-------KK--H-R-H----V-SIKALKKWSKQV------------------------- 129 (289)
Q Consensus 98 v~e~~~~~sL~~-------~~-------~~--~-~-~----l-~~~~~~~~~~ql------------------------- 129 (289)
|.+|++|.+|.. .+ .+ . + + . ....+..+..++
T Consensus 88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 167 (330)
T PLN02421 88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDE 167 (330)
T ss_pred eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHH
Confidence 789988765521 01 10 0 0 0 1 112222222111
Q ss_pred HHHHHHH-hcCC--CCceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 130 LEGLEYL-HTHE--PCIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 130 ~~~l~~l-h~~~--~~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
+..+..+ ...+ ..++|+|+.+.||+++++.+.++++||+.+..
T Consensus 168 ~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 168 IVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred HHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1111111 1111 13899999999999986536899999987754
No 489
>PTZ00384 choline kinase; Provisional
Probab=96.78 E-value=0.011 Score=52.20 Aligned_cols=80 Identities=14% Similarity=0.063 Sum_probs=43.8
Q ss_pred eeeecccCcceEEEEeecCC-CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceE-EeeeeEEeCCCCeeEEEe
Q 022956 22 SDLLGSGAVKKVYRAFDQEE-GIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYII-VCYSVWLDDQHNTLNFIT 99 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~ 99 (289)
.+.|..|-...+|++..... +..+.+|.+.........+..-.-.+|+++++.+...++. ++++.+ . -+++.
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f--~----~g~l~ 128 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRF--G----DFTIQ 128 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEec--C----CEEEE
Confidence 45566688888999865432 2233333221111111111112235588889898766665 444443 2 25789
Q ss_pred ccccCCcH
Q 022956 100 EVCTSGNL 107 (289)
Q Consensus 100 e~~~~~sL 107 (289)
||++|.+|
T Consensus 129 efIeGr~l 136 (383)
T PTZ00384 129 EWVEGNTM 136 (383)
T ss_pred EEeccccC
Confidence 99999765
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.60 E-value=0.031 Score=47.95 Aligned_cols=29 Identities=14% Similarity=0.175 Sum_probs=25.7
Q ss_pred CceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 142 CIIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
+++|+|+.++||+++++ +.+.++||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~-~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDET-RGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCC-CCEEEEEhhhcc
Confidence 39999999999999988 789999997654
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.54 E-value=0.029 Score=48.57 Aligned_cols=75 Identities=16% Similarity=0.171 Sum_probs=56.4
Q ss_pred CCCeeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCCc
Q 022956 91 QHNTLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGFA 170 (289)
Q Consensus 91 ~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~~ 170 (289)
+..+.|+++++. |+++.-.-. -..+++..++++.+..+.-+..+ .++-|+++...||+++ + |+|.|+||-++
T Consensus 297 e~~y~yl~~kdh-gt~is~ik~----~~~~e~lsff~s~~sil~~lekk-f~fehrnlt~~niLId-~-GnvtLIDfkls 368 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISIIKA----DRSEEELSFFWSCISILDILEKK-FPFEHRNLTLDNILID-E-GNVTLIDFKLS 368 (488)
T ss_pred CceEEEEEEecC-Cceeeeeec----ccHHHHHHHHHHHHHHHhhhhhc-CCcccccccccceeee-c-CceEEEEeeee
Confidence 446778888886 335433211 24578889999988887776654 3489999999999999 5 89999999988
Q ss_pred ccc
Q 022956 171 AIV 173 (289)
Q Consensus 171 ~~~ 173 (289)
+..
T Consensus 369 Rl~ 371 (488)
T COG5072 369 RLS 371 (488)
T ss_pred ecc
Confidence 744
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.44 E-value=0.043 Score=46.42 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=43.8
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCC---CCceEEeeeeEEeCCCCeeEEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLK---NKYIIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~~lv 98 (289)
.+.|+.|....+|++. .++..+.+|+-.... ...+..|..-|+.|. .-.+++++.+.... +.-++|
T Consensus 22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~-------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~--~~~fLl 90 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD--TDGGSYFVKVNSESG-------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYD--DDAFLL 90 (288)
T ss_dssp EEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG-------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S--SCCEEE
T ss_pred eEecCCCChhheEEEE--CCCccEEEEecChhh-------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec--CCceEE
Confidence 4668889999999986 678899999987322 245677888888874 23456666655433 335889
Q ss_pred eccccCC
Q 022956 99 TEVCTSG 105 (289)
Q Consensus 99 ~e~~~~~ 105 (289)
+||++.+
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9998876
No 493
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.09 E-value=0.048 Score=43.95 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=66.2
Q ss_pred EEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCceEEeeeeEEeCCCCeeEEEeccccCCcHHHHHHhcCCCCHHHHH
Q 022956 44 EVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKYIIVCYSVWLDDQHNTLNFITEVCTSGNLRTYRKKHRHVSIKALK 123 (289)
Q Consensus 44 ~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~ 123 (289)
+..+|+++..+..- ....+..+.+++.++. .|+++.. +.+-.+.++.|.|-... ... .
T Consensus 87 ~L~lKKi~slp~~~---~~~~y~nky~v~Armh--GilrL~N----Dn~~~yGvIlE~Cy~~~------------i~~-~ 144 (308)
T PF07387_consen 87 PLFLKKIRSLPCCI---NDALYFNKYRVFARMH--GILRLKN----DNNYKYGVILERCYKIK------------INF-S 144 (308)
T ss_pred hhhhhhccCCCccc---chhhhhhhhhHHHHhh--heeEeec----CCCceeEEEEeeccCcc------------cch-h
Confidence 45566665443321 1244567788887775 5666652 34456778888874421 111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCceecCCCCCceEEeCCCCcEEEeccCC
Q 022956 124 KWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGF 169 (289)
Q Consensus 124 ~~~~ql~~~l~~lh~~~~~~~h~dl~~~nili~~~~~~~~l~d~g~ 169 (289)
.+...=+++|.-.|+......|||.+|+||+-|.. |.+||+|-+.
T Consensus 145 N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~-G~lKlVDP~~ 189 (308)
T PF07387_consen 145 NFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKF-GYLKLVDPVC 189 (308)
T ss_pred HHHHHhHHHHHHhhccCCCeecCCCChhheeecCC-CCEEecChhh
Confidence 11111246677789766669999999999999999 9999999764
No 494
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.90 E-value=0.095 Score=45.26 Aligned_cols=29 Identities=28% Similarity=0.373 Sum_probs=24.3
Q ss_pred ceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 143 IIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 143 ~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++|+|+.|.||+++++...+.+.||+-+.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccc
Confidence 89999999999999882248899997554
No 495
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.72 E-value=0.054 Score=47.65 Aligned_cols=64 Identities=20% Similarity=0.180 Sum_probs=46.0
Q ss_pred eeEEEeccccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHhcCCCCceecCCCCCceEEeCCCC
Q 022956 94 TLNFITEVCTSGNLRTYRKKHRHVSIKALKKWSKQVLEGLE-YLHTHEPCIIHRDLNCSNIFINGNIG 160 (289)
Q Consensus 94 ~~~lv~e~~~~~sL~~~~~~~~~l~~~~~~~~~~ql~~~l~-~lh~~~~~~~h~dl~~~nili~~~~~ 160 (289)
...++-+|..|.++..++.... .++....+++.-.++|+- .+--.+ ++|.|++|.||++..+.+
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~~~-~pe~l~kkva~lg~~AllkMl~vDN--FvHaDlHPGNVlirf~~t 383 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKWKS-QPEALVKKVAKLGVNALLKMLIVDN--FVHADLHPGNVLIRFNKT 383 (565)
T ss_pred cceeeeeccccccHHhhhhccc-ChHHHHHHHHHHHHHHHHHHHHhhc--ceecccCCCcEEEEecCC
Confidence 3567888888989998888643 455566666666666643 334557 999999999999976643
No 496
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.51 E-value=0.25 Score=40.13 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=48.7
Q ss_pred eeeecccCcceEEEEeecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhCCCCc---eEEeeeeEEeCCCCeeEEE
Q 022956 22 SDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLSHFSEDPVLVNRLHSEVQLLRTLKNKY---IIVCYSVWLDDQHNTLNFI 98 (289)
Q Consensus 22 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~---i~~~~~~~~~~~~~~~~lv 98 (289)
.+.+..|.--..|.+.+ ...++.+|+-. ......+..|+.-|..|.-.+ +.+.+.+ ..++.+.|+|
T Consensus 21 r~~v~gG~inea~~v~d--g~~~~FvK~n~-------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~--G~~~~~sylV 89 (286)
T COG3001 21 REEVSGGDINEAWRLRD--GTDPFFVKCNQ-------REQLSMFTAEADGLELLARSNTITVPKVIAV--GASRDHSYLV 89 (286)
T ss_pred ccccCCccccceeEeec--CCcceEEEecc-------hhhHHHHHHHHHHHHHHHhcCCccccceEEe--cCCCCeeEEE
Confidence 34565565556666643 24567777764 233567888888888886555 3444443 4566789999
Q ss_pred eccccCCcH
Q 022956 99 TEVCTSGNL 107 (289)
Q Consensus 99 ~e~~~~~sL 107 (289)
++|++.+.+
T Consensus 90 le~L~~~~~ 98 (286)
T COG3001 90 LEYLPTGPL 98 (286)
T ss_pred EeeccCCCC
Confidence 999988655
No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.26 E-value=1.1 Score=38.79 Aligned_cols=26 Identities=27% Similarity=0.248 Sum_probs=21.8
Q ss_pred ceecCCCCCceEEeCCCCcEEEeccCCcc
Q 022956 143 IIHRDLNCSNIFINGNIGQVKIGDLGFAA 171 (289)
Q Consensus 143 ~~h~dl~~~nili~~~~~~~~l~d~g~~~ 171 (289)
++|+|+.+.||+++ + .+.++||+-+.
T Consensus 198 liHgD~h~~NvL~~-d--~~~iIDFDd~~ 223 (325)
T PRK11768 198 RLHGDCHPGNILWR-D--GPHFVDLDDAR 223 (325)
T ss_pred ceecCCCchhcccc-C--CcEEEeCCCCC
Confidence 89999999999995 3 47899997554
No 498
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=95.02 E-value=0.25 Score=41.95 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=23.8
Q ss_pred CceecCCCCCceEEeCCC-C---cEEEeccCCcc
Q 022956 142 CIIHRDLNCSNIFINGNI-G---QVKIGDLGFAA 171 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~-~---~~~l~d~g~~~ 171 (289)
-++|||+...||++..+. | .+++.||..+.
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~ 249 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR 249 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeecccccc
Confidence 389999999999996652 3 69999996544
No 499
>PRK06148 hypothetical protein; Provisional
Probab=94.94 E-value=1.4 Score=44.28 Aligned_cols=31 Identities=29% Similarity=0.415 Sum_probs=24.6
Q ss_pred CceecCCCCCceEEeCCC-CcEE-EeccCCccc
Q 022956 142 CIIHRDLNCSNIFINGNI-GQVK-IGDLGFAAI 172 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~-~~~~-l~d~g~~~~ 172 (289)
.++|+|+++.||+++.+. +.+. |+|||-+..
T Consensus 204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 204 QVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred ceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 399999999999998772 1454 999987754
No 500
>PTZ00296 choline kinase; Provisional
Probab=94.91 E-value=0.25 Score=44.61 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=24.3
Q ss_pred CceecCCCCCceEEeCCCCcEEEeccCCccc
Q 022956 142 CIIHRDLNCSNIFINGNIGQVKIGDLGFAAI 172 (289)
Q Consensus 142 ~~~h~dl~~~nili~~~~~~~~l~d~g~~~~ 172 (289)
.++|.|+.+.||+.+.+ .++|+||..+..
T Consensus 285 VfCHNDl~~~NiL~~~~--~l~LIDfEYAg~ 313 (442)
T PTZ00296 285 VFCHNDLQENNIINTNK--CLRLIDFEYSGY 313 (442)
T ss_pred eEEeCCCCccceeecCC--CEEEEeeccccc
Confidence 48999999999998654 599999987753
Done!