BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022960
(289 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 26/251 (10%)
Query: 32 GEKLVGILHETGSK--QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE 89
G +LVG E + + I+ HGF + ++ + +A +L E I++ RFDF+G+G+S+
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 90 GSFLYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINI 147
G F E ED AI+ V ++GHS+GG + A Y D I V+ +
Sbjct: 91 GKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLL 150
Query: 148 SGRFNLK-RGIEGRL-GLGY-----LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD 200
+ LK +EG G+ Y R+ F D+ G R+ Q+ + +S
Sbjct: 151 APAATLKGDALEGNTQGVTYNPDHIPDRLP---FKDL--TLGGFYLRIAQQLPIYEVSAQ 205
Query: 201 IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDEL 259
V IHGT D +V + ++D+ N LH+IEGADH F+ S+Q
Sbjct: 206 FTKP---------VCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNA 256
Query: 260 ASLVIQFIKAN 270
+L F++ N
Sbjct: 257 VNLTTDFLQNN 267
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 26/251 (10%)
Query: 32 GEKLVGILHETGSK--QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE 89
G +LVG E + + I+ HGF + ++ + +A +L E I++ RFDF+G+G+S+
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 90 GSFLYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINI 147
G F E ED AI+ V ++GH++GG + A Y D I V+ +
Sbjct: 91 GKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLL 150
Query: 148 SGRFNLK-RGIEGRL-GLGY-----LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD 200
+ LK +EG G+ Y R+ F D+ G R+ Q+ + +S
Sbjct: 151 APAATLKGDALEGNTQGVTYNPDHIPDRLP---FKDL--TLGGFYLRIAQQLPIYEVSAQ 205
Query: 201 IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDEL 259
V IHGT D +V + ++D+ N LH+IEGADH F+ S+Q
Sbjct: 206 FTKP---------VCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNA 256
Query: 260 ASLVIQFIKAN 270
+L F++ N
Sbjct: 257 VNLTTDFLQNN 267
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 32 GEKLVGILHETGSK--QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE 89
G +LVG E + + I+ HGF + ++ + +A +L E I++ RFDF+G+G+S+
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 90 GSFLYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINI 147
G F E ED AI+ V ++GH++GG + A Y D I V+ +
Sbjct: 91 GKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLL 150
Query: 148 SGRFNLK-RGIEGRL-GLGY-----LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD 200
+ LK +EG G+ Y R+ F D+ G R+ Q+ + +S
Sbjct: 151 APAATLKGDALEGNTQGVTYNPDHIPDRLP---FKDL--TLGGFYLRIAQQLPIYEVSAQ 205
Query: 201 IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDEL 259
V IHGT D +V + ++D+ N LH+IEGADH F+ S+Q
Sbjct: 206 FTKP---------VCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNA 256
Query: 260 ASLVIQFIK 268
+L F++
Sbjct: 257 VNLTTDFLQ 265
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106
L I+ HGF + +V + L G++ R D G+G+S+G F + ++ A
Sbjct: 29 LCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILA 88
Query: 107 IVQDFCAKGRVITAII--GHSKGGNAVLLYASKYND-ISIVINISGRF---NLKRGIEGR 160
+V D+ K +T I GHS+GG +V+L A+ D I +I +S + R E
Sbjct: 89 VV-DYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGE-L 146
Query: 161 LGLGYLQRIKQNGFIDVRNKKGKLEY-RVTQ----ESLMDRLSTDIHAACHMICQDCRVL 215
LGL + + +K K Y RV Q E +D+ + VL
Sbjct: 147 LGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTK-------------PVL 193
Query: 216 TIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFI 267
+HG +D+ VP E ++ F K N KL I G H + H + + V +F+
Sbjct: 194 IVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELVTEAVKEFM 245
>pdb|3LLC|A Chain A, Crystal Structure Of Putative Hydrolase (Yp_002548124.1)
From Agrobacterium Vitis S4 At 1.80 A Resolution
Length = 270
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 65 NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124
+LAA+L G+ A RFD+SG+G S G+F G R E+ A++ F + + ++G
Sbjct: 60 DLAASL---GVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFKPEKAI---LVGS 113
Query: 125 SKGGNAVL-----LYASKYNDIS----IVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175
S GG L L A N ++I + F IE LG + +NG+
Sbjct: 114 SXGGWIALRLIQELKARHDNPTQVSGXVLIAPAPDFTSDL-IEPLLGDRERAELAENGYF 172
Query: 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDK 235
+ ++ T+ D + + A I C V + G D VP + AL+ +
Sbjct: 173 EEVSEYSPEPNIFTRALXEDGRANRVXAG--XIDTGCPVHILQGXADPDVPYQHALKLVE 230
Query: 236 FIPNHK--LHIIEGADHEFTSHQD 257
+P L ++ DH + QD
Sbjct: 231 HLPADDVVLTLVRDGDHRLSRPQD 254
>pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A
Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6
Resolution
Length = 220
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 49 IVCHGFQSTKDRI--PMVNLAA-ALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105
IVCH + + +V +AA AL GI+ RF+F G S GSF +G+ E +DLR
Sbjct: 41 IVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGD--GEQDDLR 98
Query: 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINI---SGRFNLK 154
A+ + A+ T + G V L A+ + ++I+I +GR++
Sbjct: 99 AVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAALEPQVLISIAPPAGRWDFS 150
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 44/262 (16%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G+ Q V++ HGF + +AAL G +D G G+S +Y A
Sbjct: 21 GTGQPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAA 78
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIV----INISGRFNLKR--- 155
DL +++ + V+ +G S G V Y S Y I + F LK
Sbjct: 79 DLNTVLETLDLQDAVL---VGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
Query: 156 ---GIEGRLGLGYLQRIKQN------GFI-DVRNKKGKLEYRVTQESLMDRLST------ 199
G + +K + GF D N L R+++E++ + +T
Sbjct: 136 PDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF 195
Query: 200 ------------DIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIE 246
D A I D L +HGT D+ +P E+ A F K +P+ + +E
Sbjct: 196 FAAAAAPTTWYTDFRADIPRI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVE 253
Query: 247 GADHE-FTSHQDELASLVIQFI 267
GA H +H +E+ + ++ F+
Sbjct: 254 GAPHGLLWTHAEEVNTALLAFL 275
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G+ Q V++ HGF + +AAL G +D G G+S +Y A
Sbjct: 21 GTGQPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAA 78
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISG--RFNLKR--- 155
DL +++ + V+ +G S G V Y S Y I+ V ++ F LK
Sbjct: 79 DLNTVLETLDLQDAVL---VGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
Query: 156 ---GIEGRLGLGYLQRIKQN------GFI-DVRNKKGKLEYRVTQESLMDRLST------ 199
G + +K + GF D N L R+++E++ + +T
Sbjct: 136 PDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF 195
Query: 200 ------------DIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIE 246
D A I D L +HGT D+ +P E+ A F K +P+ + +E
Sbjct: 196 FAAAAAPTTWYTDFRADIPRI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVE 253
Query: 247 GADHE-FTSHQDELASLVIQFI 267
GA H +H +E+ + ++ F+
Sbjct: 254 GAPHGLLWTHAEEVNTALLAFL 275
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G+ Q V++ HGF + +AAL G +D G G+S +Y A
Sbjct: 21 GAGQPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAA 78
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISG--RFNLKR--- 155
DL +++ + V+ +G S G V Y S Y I+ V ++ F LK
Sbjct: 79 DLNTVLETLDLQDAVL---VGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
Query: 156 ---GIEGRLGLGYLQRIKQN------GFI-DVRNKKGKLEYRVTQESLMDRLST------ 199
G + +K + GF D N L R+++E++ + +T
Sbjct: 136 PDGAAPKEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF 195
Query: 200 ------------DIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIE 246
D A I D L +HGT D+ +P E+ A F K +P+ + +E
Sbjct: 196 FAAAAAPTTWYTDFRADIPRI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVE 253
Query: 247 GADHE-FTSHQDELASLVIQFI 267
GA H +H +E+ + ++ F+
Sbjct: 254 GAPHGLLWTHAEEVNTALLAFL 275
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 89/227 (39%), Gaps = 49/227 (21%)
Query: 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103
+++ + + HG+ T +L + G + + D+ G G S S YG R + +
Sbjct: 26 NRRSIALFHGYSFTSXDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKH 85
Query: 104 LRAIVQDFC-AKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162
++D+ A G + I G S GG V+ +Y DI ++G +
Sbjct: 86 AAEFIRDYLKANGVARSVIXGASXGGGXVIXTTLQYPDI---------------VDGIIA 130
Query: 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKD 222
+ V + KG + ++ Q++L+ + G+KD
Sbjct: 131 VAPAW---------VESLKGDXK-KIRQKTLL----------------------VWGSKD 158
Query: 223 KMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
+VP + E+ I +L I+EG+ H + +E + + F++
Sbjct: 159 HVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFLR 205
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 95/265 (35%), Gaps = 44/265 (16%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIP--MVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS Q ++ HG+ D M+ LAA +G D G+G S + +
Sbjct: 15 DWGSGQPIVFSHGWPLNADSWESQMIFLAA----QGYRVIAHDRRGHGRSSQPWSGNDMD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISI----VINISGRFNLK 154
A+DL +++ + V+ G S GG V Y ++ + +I+ LK
Sbjct: 71 TYADDLAQLIEHLDLRDAVL---FGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLK 127
Query: 155 -RGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRV----------TQESLMDRLSTDIHA 203
G L + I+Q D L + ++D A
Sbjct: 128 TEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMA 187
Query: 204 ACHMICQDC------------------RVLTIHGTKDKMVPAE-DALEFDKFIPNHKLHI 244
A H DC L +HG D++VP E + + L I
Sbjct: 188 AGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKI 247
Query: 245 IEGADHEFT-SHQDELASLVIQFIK 268
GA H T +H+D+L + ++ FIK
Sbjct: 248 YSGAPHGLTDTHKDQLNADLLAFIK 272
>pdb|3TRD|A Chain A, Structure Of An Alpha-Beta Serine Hydrolase Homologue From
Coxiella Burnetii
Length = 208
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 49 IVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105
I+CH T + + LA AL+ G+ RF+F G G+S+G Y N E EDL+
Sbjct: 35 IICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR--YDNGVGEVEDLK 92
Query: 106 AIVQ 109
A+++
Sbjct: 93 AVLR 96
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 41 ETGSKQLVIVCHGFQ----STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96
E GS V +CHGF S + +IP AL + G D G GES
Sbjct: 254 ELGSGPAVCLCHGFPESWYSWRYQIP------ALAQAGYRVLAMDMKGYGESSAPPEIEE 307
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155
Y E + +V G IGH GG V A Y + + V +++ F
Sbjct: 308 YCMEVL-CKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF---- 362
Query: 156 GIEGRLGLGYLQRIKQNGFID 176
I + L+ IK N D
Sbjct: 363 -IPANPNMSPLESIKANPVFD 382
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 41 ETGSKQLVIVCHGFQ----STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96
E GS V +CHGF S + +IP AL + G D G GES
Sbjct: 50 ELGSGPAVCLCHGFPESWYSWRYQIP------ALAQAGYRVLAMDMKGYGESSAPPEIEE 103
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155
Y E + +V G IGH GG V A Y + + V +++ F
Sbjct: 104 YCMEVL-CKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF---- 158
Query: 156 GIEGRLGLGYLQRIKQNGFID 176
I + L+ IK N D
Sbjct: 159 -IPANPNMSPLESIKANPVFD 178
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 41 ETGSKQLVIVCHGFQ----STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96
E GS V +CHGF S + +IP AL + G D G GES
Sbjct: 35 ELGSGPAVCLCHGFPESWYSWRYQIP------ALAQAGYRVLAMDMKGYGESSAPPEIEE 88
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155
Y E + +V G IGH GG V A Y + + V +++ F
Sbjct: 89 YCMEVL-CKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF---- 143
Query: 156 GIEGRLGLGYLQRIKQNGFID 176
I + L+ IK N D
Sbjct: 144 -IPANPNMSPLESIKANPVFD 163
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 44/254 (17%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G+ V++ HGF + +AAL G +D G G+S +Y A
Sbjct: 22 GTGVPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAA 79
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISG--RFNLKR--- 155
DL +++ + V+ +G S G V Y S Y I+ V ++ F LK
Sbjct: 80 DLNTVLETLDLQDAVL---VGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDN 136
Query: 156 ---GIEGRLGLGYLQRIKQN------GFI-DVRNKKGKLEYRVTQESLMDRLST------ 199
G + +K + GF D N L R+++E++ + +T
Sbjct: 137 PDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF 196
Query: 200 ------------DIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIE 246
D A I D L +HGT D+ +P E+ A F K +P+ + +E
Sbjct: 197 FAAAAAPTTWYTDFRADIPRI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVE 254
Query: 247 GADHE-FTSHQDEL 259
GA H +H +E+
Sbjct: 255 GAPHGLLWTHAEEV 268
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 214 VLTIHGTKDKMVP-AEDALEFDKFIPNHKLHIIEGADHEF-TSHQDELASLVIQFIKA 269
VL IHG D++VP A+ + K + N KL +GA H T+H D++ + +++F+++
Sbjct: 223 VLVIHGDDDQVVPYADSGVLSAKLVKNGKLITYKGAPHGIPTTHADKVNADLLEFLQS 280
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 214 VLTIHGTKDKMVPAEDALEFD-KFIPNHKLHIIEGADHEF-TSHQDELASLVIQFIKA 269
VL +HG D++VP E++ K +PN L +G H T+H D + + ++ FI++
Sbjct: 219 VLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIRS 276
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 13 FKDWGSGKPVLFSHGWPLDADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNL 153
A+D+ +++ K ++G S GG V Y +++ + ++ ++ F
Sbjct: 71 TFADDIAQLIEHLDLKE---VTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
Query: 154 KRGIEGRLGLGYLQRIK------QNGFIDVRN------KKGK-----LEYRVTQESLMDR 196
K + L R K + FI N KG+ ++ + Q +L+
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 197 LSTDIHAACHMICQDCR---------VLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIE 246
L + D R L IHG D++VP E + + I +L + +
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 247 GADHEF-TSHQDELASLVIQFIK 268
A H F +H +L ++ F+K
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLK 270
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 30/181 (16%)
Query: 121 IIGHSKGGNAVLLYASKYND----ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ-NGFI 175
I+G+S GG + A +Y++ + ++ + RF++ G+ G Y I+ +
Sbjct: 99 IVGNSFGGGLAIATALRYSERVDRMVLMGAVGTRFDVTEGLNAVWG--YTPSIENMRNLL 156
Query: 176 D--------VRNKKGKLEYRVT-----QESLMDRLSTDIHAACHMIC---QDCRVLT--- 216
D V ++ +L Y + QES + +D + L
Sbjct: 157 DIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNET 216
Query: 217 --IHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFI-KANYQ 272
IHG +D++VP +L + I +LH+ H Q D LV++F +AN
Sbjct: 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEANTP 276
Query: 273 K 273
K
Sbjct: 277 K 277
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 15/211 (7%)
Query: 70 LEREGISAFRFDFSGNGESEGS---FLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
L ++ + +D G G S F + R+A+D +++ K +++G S
Sbjct: 47 LNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKK---VSLLGWSN 103
Query: 127 GGNAVLLYASKYNDI--SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184
GG L+ A+KY +VI + + G+ + + + + G
Sbjct: 104 GGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD 163
Query: 185 EYRVTQESLMDRLSTDIHAACHMICQ------DCRVLTIHGTKDKMVPAEDALEFDKFIP 238
+ T E +D + H IC+ C L +HG KD +VP A K +
Sbjct: 164 YFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK 223
Query: 239 NHKLHII-EGADHEFTSHQDELASLVIQFIK 268
+LH++ EG + DE L F++
Sbjct: 224 GSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed With
A Product Analogue
Length = 254
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 70 LEREGISAFRFDFSGNGES---EGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
L ++ + +D G G S + F + R+A+D +++ K +++G S
Sbjct: 47 LNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKK---VSLLGWSD 103
Query: 127 GGNAVLLYASKYNDI--SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184
GG L+ A+KY +VI + + G+ + + + + G
Sbjct: 104 GGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD 163
Query: 185 EYRVTQESLMDRLSTDIHAACHMICQ------DCRVLTIHGTKDKMVPAEDALEFDKFIP 238
+ T E +D + H IC+ C L +HG KD +VP A K +
Sbjct: 164 YFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK 223
Query: 239 NHKLHII-EGADHEFTSHQDELASLVIQFIK 268
+LH++ EG + DE L F++
Sbjct: 224 GSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 13 FKDWGSGKPVLFSHGWPLDADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNL 153
A+D+ +++ K ++G S GG V Y +++ + ++ ++ F
Sbjct: 71 TFADDIAQLIEHLDLKE---VTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPIFGQ 127
Query: 154 KRGIEGRLGLGYLQRIK------QNGFIDVRN------KKGK-----LEYRVTQESLMDR 196
K + L R K + FI N KG+ ++ + Q +L+
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 197 LSTDIHAACHMICQDCR---------VLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIE 246
L + D R L IHG D++VP E + + I +L + +
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 247 GADHEF-TSHQDELASLVIQFIK 268
A H F +H +L ++ F+K
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLK 270
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 121 IIGHSKGGNAVLLYASKYN---DISIVINISG-RFNLKRGIEGRLGLGYLQRIKQ-NGFI 175
I+G++ GG + A +Y+ D +++ +G RF++ G+ G Y I+ +
Sbjct: 99 IVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWG--YTPSIENMRNLL 156
Query: 176 D--------VRNKKGKLEYRVT-----QESLMDRLSTDIHAACHMIC---QDCRVLT--- 216
D V ++ +L Y + QES + +D + L
Sbjct: 157 DIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNET 216
Query: 217 --IHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFI-KANYQ 272
IHG +D++VP +L + I +LH+ H Q D LV++F +AN
Sbjct: 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEANTP 276
Query: 273 K 273
K
Sbjct: 277 K 277
>pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase
From Serratia Marcescens
pdb|1WM1|A Chain A, Crystal Structure Of Prolyl Aminopeptidase, Complex With
Pro-tboda
pdb|1X2B|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Sar-Tboda
pdb|1X2E|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Ala-Tboda
Length = 317
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252
+ +HG D ++A + K P +LHI+EGA H +
Sbjct: 260 AVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSY 298
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 13 FKDWGSGKPVLFSHGWLLDADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNL 153
A+D+ +++ K ++G S GG V Y +++ + ++ ++ F
Sbjct: 71 TFADDIAQLIEHLDLKE---VTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
Query: 154 KRGIEGRLGLGYLQRIK------QNGFIDVRN------KKGK-----LEYRVTQESLMDR 196
K + L R K + FI N KG+ ++ + Q +L+
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 197 LSTDIHAACHMICQDCR---------VLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIE 246
L + D R L IHG D++VP E + + I +L + +
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 247 GADHEF-TSHQDELASLVIQFIK 268
A H F +H +L ++ F+K
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLK 270
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFI 267
VL I G +D++ P + AL K IP +LH+ H + DE L I+F+
Sbjct: 253 VLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFL 307
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 13 FKDWGSGKPVLFSHGWLLDADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNL 153
A+D+ +++ K ++G S GG V Y +++ + ++ ++ F
Sbjct: 71 TFADDIAQLIEHLDLKE---VTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
Query: 154 KRGIEGRLGLGYLQRIK------QNGFIDVRN------KKGK-----LEYRVTQESLMDR 196
K + L R K + FI N KG+ ++ + Q +L+
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 197 LSTDIHAACHMICQDCR---------VLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIE 246
L + D R L IHG D++VP E + + I +L + +
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 247 GADHEF-TSHQDELASLVIQFIK 268
A H F +H +L ++ F+K
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLK 270
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 211 DCRVLTIHGTKDKMVPAEDAL-EFDKFIPNHKLHIIEGADH-EFTSHQDELASLVIQFIK 268
D VL HGT D++VP DA + + + N L EG H ++H + L ++ F+K
Sbjct: 215 DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
Query: 269 A 269
+
Sbjct: 275 S 275
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFI 267
VL I G +D++ P + AL K IP +LH+ H + DE L I+F+
Sbjct: 233 VLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 13 FKDWGSGKPVLFSHGWILDADMWEY--QMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNL 153
A+D+ +++ K ++G S GG V Y +++ + ++ ++ F
Sbjct: 71 TFADDIAQLIEHLDLKE---VTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
Query: 154 KRGIEGRLGLGYLQRIK------QNGFIDVRN------KKGK-----LEYRVTQESLMDR 196
K + L R K + FI N KG+ ++ + Q +L+
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 197 LSTDIHAACHMICQDCR---------VLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIE 246
L + D R L IHG D++VP E + + I +L + +
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 247 GADHEF-TSHQDELASLVIQFIK 268
A H F +H +L ++ F+K
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLK 270
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
Length = 279
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 215 LTIHGTKDKMVPAE-DALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFI 267
L +HGTKD ++P + A F + +P +EGA H +H DE+ + + F+
Sbjct: 223 LILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 70 LEREGISAFRFDFSGNGES---EGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
L ++ + +D G G S + F + R+A+D +++ K +++G +
Sbjct: 47 LNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKK---VSLLGWAD 103
Query: 127 GGNAVLLYASKYNDI--SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184
GG L+ A+KY +VI + + G+ + + + + G
Sbjct: 104 GGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD 163
Query: 185 EYRVTQESLMDRLSTDIHAACHMICQ------DCRVLTIHGTKDKMVPAEDALEFDKFIP 238
+ T E +D + H IC+ C L +HG KD +VP A K +
Sbjct: 164 YFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK 223
Query: 239 NHKLHII-EGADHEFTSHQDELASLVIQFIK 268
+LH++ EG + DE L F++
Sbjct: 224 GSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254
>pdb|2QJW|A Chain A, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|B Chain B, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|C Chain C, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
pdb|2QJW|D Chain D, Crystal Structure Of A Putative Hydrolase Of The AlphaBETA
Superfamily (Xcc1541) From Xanthomonas Campestris Pv.
Campestris At 1.35 A Resolution
Length = 176
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 49 IVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108
I+ HGF+S D + + LA ER G + R DF+ G+ R + L I
Sbjct: 8 ILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIA 67
Query: 109 QDFCAKGRVITA 120
+ KG V+ A
Sbjct: 68 RAATEKGPVVLA 79
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSH 255
+ TD A + L ++G +D M + + E K +PNH++ I++GA H +
Sbjct: 137 ICTDKINAANYASVKTPALIVYGDQDPM--GQTSFEHLKQLPNHRVLIMKGAGHPCYLDK 194
Query: 256 QDELASLVIQFIK 268
+E + ++ F++
Sbjct: 195 PEEWHTGLLDFLQ 207
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 211 DCRVLTIHGTKDKMVPAE-DALEFDKFIPNHKLHIIEGADH 250
D L +HG D++VP + + + IPN +L + EG+ H
Sbjct: 212 DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSH 252
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 215 LTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH-EFTSHQDELASLVIQFI 267
L + G DK+VP E A +F I + +II H H ++ A+ + F+
Sbjct: 226 LVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 279
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 215 LTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH-EFTSHQDELASLVI 264
L ++G D +VP + DK P+ + +I A H F SH E L++
Sbjct: 200 LRLYGYLDGLVPRKVVPXLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 250
>pdb|1XRM|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Ala-Phe
pdb|1XRN|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Ala
pdb|1XRO|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Leu
pdb|1XRP|A Chain A, Crystal Structure Of Active Site F1-mutant E213q Soaked
With Peptide Pro-leu-gly-gly
Length = 293
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G S
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSS 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|1XQV|A Chain A, Crystal Structure Of Inactive F1-Mutant G37a
Length = 293
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G S
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSS 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|1XRQ|A Chain A, Crystal Structure Of Active Site F1-Mutant E245q Soaked
With Peptide Phe-Leu
pdb|1XRR|A Chain A, Crystal Structure Of Active Site F1-mutant E245q Soaked
With Peptide Pro-pro
Length = 293
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G S
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSS 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|1MTZ|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
pdb|1MU0|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
Complex With Pck
Length = 293
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G S
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSS 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|1XRL|A Chain A, Crystal Structure Of Active Site F1-Mutant Y205f Complex
With Inhibitor Pck
Length = 293
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G S
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSS 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF-TSHQDELASLVIQFIK 268
+ G D+ VP + L+ I + +LH+ H H DE LVI F++
Sbjct: 227 AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLR 284
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF-TSHQDELASLVIQFIK 268
+ G D+ VP + L+ I + +LH+ H H DE LVI F++
Sbjct: 224 AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLR 281
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF-TSHQDELASLVIQFIK 268
+ G D+ VP + L+ I + +LH+ H H DE LVI F++
Sbjct: 227 AKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLR 284
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF-TSHQDELASLVIQFI 267
+ L + G D+ VP + L I +LHI H H D LV+ F+
Sbjct: 230 AQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFL 286
>pdb|3ITE|A Chain A, The Third Adenylation Domain Of The Fungal Sidn Non-
Ribosomal Peptide Synthetase
pdb|3ITE|B Chain B, The Third Adenylation Domain Of The Fungal Sidn Non-
Ribosomal Peptide Synthetase
Length = 562
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 22/81 (27%)
Query: 112 CAKGRVI----TAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGL---- 163
C+ GR++ T IGH G + + A N+ ++K+G G L +
Sbjct: 335 CSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNE-----------HVKKGXAGELVIEGSL 383
Query: 164 ---GYLQRIKQNGFIDVRNKK 181
GYL R GF D+ +K
Sbjct: 384 VANGYLNRPDAKGFCDINGRK 404
>pdb|1XQW|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Phe-Leu
pdb|1XQX|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pck
pdb|1XQY|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pro-Leu-
Gly-Gly
Length = 293
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 70 LEREGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125
+ +EGI+ +D G G SE F EAE LR+ + G ++G +
Sbjct: 51 MTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSA 105
Query: 126 KGGNAVLLYASKYND 140
GG L YA KY D
Sbjct: 106 YGGALALAYAVKYQD 120
>pdb|1S72|K Chain K, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
pdb|1YHQ|K Chain K, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1YI2|K Chain K, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1YIJ|K Chain K, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1YIT|K Chain K, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1YJ9|K Chain K, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
pdb|1YJN|K Chain K, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1YJW|K Chain K, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
pdb|1VQ4|K Chain K, The Structure Of The Transition State Analogue "daa"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|1VQ5|K Chain K, The Structure Of The Transition State Analogue "raa"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|1VQ6|K Chain K, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
pdb|1VQ7|K Chain K, The Structure Of The Transition State Analogue "dca"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|1VQ8|K Chain K, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
pdb|1VQ9|K Chain K, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
pdb|1VQK|K Chain K, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
pdb|1VQL|K Chain K, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|1VQM|K Chain K, The Structure Of The Transition State Analogue "dan"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|1VQN|K Chain K, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To
The Large Ribosomal Subunit Of Haloarcula Marismortui
pdb|1VQO|K Chain K, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
pdb|1VQP|K Chain K, The Structure Of The Transition State Analogue "rap"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
pdb|2OTJ|K Chain K, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
pdb|2OTL|K Chain K, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
pdb|2QA4|K Chain K, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
pdb|2QEX|K Chain K, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
Length = 132
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 35 LVGILHETGSKQL-VIVCHGFQSTKDRIPMVNL 66
L+ TG+++L VI HG+ TK+R+P L
Sbjct: 17 LITCADNTGARELKVISVHGYSGTKNRLPKAGL 49
>pdb|1MT3|A Chain A, Crystal Structure Of The Tricorn Interacting Factor
Selenomethionine-f1
Length = 293
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 72 REGISAFRFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKG 127
+EGI+ +D G G SE F EAE LR+ + G + G S G
Sbjct: 53 KEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLXGSSYG 107
Query: 128 GNAVLLYASKYND 140
G L YA KY D
Sbjct: 108 GALALAYAVKYQD 120
>pdb|3T3N|A Chain A, Molecular Basis For The Recognition And Cleavage Of Rna
(Uuccgu) By The Bifunctional 5'-3' ExoENDORIBONUCLEASE
RNASE J
pdb|3T3O|A Chain A, Molecular Basis For The Recognition And Cleavage Of Rna
(Cugg) By The Bifunctional 5'-3' ExoENDORIBONUCLEASE
RNASE J
Length = 562
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 121 IIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180
+IG + G V +AS + I VI + ++ K +EGR L + + + G++ V+++
Sbjct: 235 VIGRAPGRVFVTTFASHIHRIQSVIWAAEKYGRKVAMEGRSMLKFSRIALELGYLKVKDR 294
Query: 181 KGKLE 185
LE
Sbjct: 295 LYTLE 299
>pdb|2JDI|G Chain G, Ground State Structure Of F1-Atpase From Bovine Heart
Mitochondria (Bovine F1-Atpase Crystallised In The
Absence Of Azide)
pdb|4ASU|G Chain G, F1-Atpase In Which All Three Catalytic Sites Contain Bound
Nucleotide, With Magnesium Ion Released In The Empty
Site
Length = 273
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 32 GEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI-SAFRFDFSGNGESEG 90
G+K+ ILH T S Q ++ F+ R P A+ + E + S + FD EG
Sbjct: 109 GDKIRSILHRTHSDQFLVT---FKEVGRRPPTFGDASVIALELLNSGYEFD-------EG 158
Query: 91 SFLYGNYR 98
S ++ +R
Sbjct: 159 SIIFNRFR 166
>pdb|1COW|G Chain G, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
pdb|1EFR|G Chain G, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
Antibiotic Efrapeptin
pdb|1BMF|G Chain G, Bovine Mitochondrial F1-Atpase
pdb|1NBM|G Chain G, The Structure Of Bovine F1-Atpase Covalently Inhibited
With 4-Chloro-7-Nitrobenzofurazan
pdb|1QO1|G Chain G, Molecular Architecture Of The Rotary Motor In Atp Synthase
From Yeast Mitochondria
pdb|1E1Q|G Chain G, Bovine Mitochondrial F1-Atpase At 100k
pdb|1E1R|G Chain G, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
Aluminium Fluoride
pdb|1E79|G Chain G, Bovine F1-Atpase Inhibited By Dccd
(Dicyclohexylcarbodiimide)
pdb|1H8H|G Chain G, Bovine Mitochondrial F1-Atpase Crystallised In The
Presence Of 5mm Amppnp
pdb|1H8E|G Chain G, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
Sites Occupied)
pdb|1W0J|G Chain G, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|1W0K|G Chain G, Beryllium Fluoride Inhibited Bovine F1-Atpase
pdb|2CK3|G Chain G, Azide Inhibited Bovine F1-Atpase
pdb|2JIZ|G Chain G, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JIZ|N Chain N, The Structure Of F1-Atpase Inhibited By Resveratrol.
pdb|2JJ1|G Chain G, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ1|N Chain N, The Structure Of F1-Atpase Inhibited By Piceatannol.
pdb|2JJ2|G Chain G, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2JJ2|N Chain N, The Structure Of F1-atpase Inhibited By Quercetin.
pdb|2V7Q|G Chain G, The Structure Of F1-Atpase Inhibited By I1-60his, A
Monomeric Form Of The Inhibitor Protein, If1.
pdb|2WSS|G Chain G, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2WSS|P Chain P, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
pdb|2XND|G Chain G, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
Synthase
Length = 272
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 32 GEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI-SAFRFDFSGNGESEG 90
G+K+ ILH T S Q ++ F+ R P A+ + E + S + FD EG
Sbjct: 109 GDKIRSILHRTHSDQFLVT---FKEVGRRPPTFGDASVIALELLNSGYEFD-------EG 158
Query: 91 SFLYGNYR 98
S ++ +R
Sbjct: 159 SIIFNRFR 166
>pdb|2W6E|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
1.
pdb|2W6F|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
2.
pdb|2W6I|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4b.
pdb|2W6J|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
5.
pdb|2W6G|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
3.
pdb|2W6H|G Chain G, Low Resolution Structures Of Bovine Mitochondrial
F1-Atpase During Controlled Dehydration: Hydration State
4a
Length = 298
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 32 GEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI-SAFRFDFSGNGESEG 90
G+K+ ILH T S Q ++ F+ R P A+ + E + S + FD EG
Sbjct: 134 GDKIRSILHRTHSDQFLVT---FKEVGRRPPTFGDASVIALELLNSGYEFD-------EG 183
Query: 91 SFLYGNYR 98
S ++ +R
Sbjct: 184 SIIFNRFR 191
>pdb|2HQQ|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
pdb|2HW1|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
Length = 298
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 92 FLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS 142
F+ + RR + DLR V + T II + G +L Y D+S
Sbjct: 71 FVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVS 121
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 44/264 (16%)
Query: 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES---EGSFLYG 95
+ E GS L + HG S + + + + + D G+G S E +
Sbjct: 62 VREKGSGPLXLFFHGITSNSAVFEPLXIRLS---DRFTTIAVDQRGHGLSDKPETGYEAN 118
Query: 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDI---SIVINISGRFN 152
+Y A+D+ +++ A+G I ++GHS G + A+KY D+ + I+ +
Sbjct: 119 DY---ADDIAGLIRTL-ARGHAI--LVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIE 172
Query: 153 LKR--GIEGRLGLG------------YLQ-----------RIK-QNGFIDVRNKKGKLEY 186
+ +E R+ G YL RI+ ++G+ V L
Sbjct: 173 TEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLAS 232
Query: 187 RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246
L +D+ A + + VL + G K+V A + + P+ + ++
Sbjct: 233 SAAXAQTARGLRSDLVPAYRDVTKP--VLIVRGESSKLVSAAALAKTSRLRPDLPVVVVP 290
Query: 247 GADHEFTSHQDELA-SLVIQFIKA 269
GADH E+ + FI A
Sbjct: 291 GADHYVNEVSPEITLKAITNFIDA 314
>pdb|2HLZ|A Chain A, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|B Chain B, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|C Chain C, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|D Chain D, Crystal Structure Of Human Ketohexokinase (Casp Target)
Length = 312
Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 92 FLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS 142
F+ + RR + DLR V + T II + G +L Y D+S
Sbjct: 85 FVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVS 135
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,258,353
Number of Sequences: 62578
Number of extensions: 335885
Number of successful extensions: 771
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 728
Number of HSP's gapped (non-prelim): 80
length of query: 289
length of database: 14,973,337
effective HSP length: 98
effective length of query: 191
effective length of database: 8,840,693
effective search space: 1688572363
effective search space used: 1688572363
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)