Your job contains 1 sequence.
>022962
MLTWRCGVSVPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLN
TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN
SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA
ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV
QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022962
(289 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170051 - symbol:AT5G50110 species:3702 "Arabi... 938 3.0e-94 1
UNIPROTKB|Q81JH4 - symbol:rsmG "Ribosomal RNA small subun... 464 5.0e-44 1
TIGR_CMR|BA_5732 - symbol:BA_5732 "glucose-inhibited divi... 464 5.0e-44 1
UNIPROTKB|Q3AG54 - symbol:rsmG "Ribosomal RNA small subun... 413 1.3e-38 1
TIGR_CMR|CHY_0008 - symbol:CHY_0008 "glucose-inhibited di... 413 1.3e-38 1
UNIPROTKB|Q71VW1 - symbol:rsmG "Ribosomal RNA small subun... 407 5.5e-38 1
UNIPROTKB|Q97QD4 - symbol:rsmG "Ribosomal RNA small subun... 381 3.1e-35 1
TIGR_CMR|DET_0776 - symbol:DET_0776 "methyltransferase Gi... 321 7.1e-29 1
UNIPROTKB|P0A6U5 - symbol:rsmG "16S rRNA m7G527 methyltra... 253 1.1e-21 1
UNIPROTKB|P94614 - symbol:rsmG "Ribosomal RNA small subun... 237 5.7e-20 1
UNIPROTKB|Q9KNG5 - symbol:rsmG "Ribosomal RNA small subun... 237 5.7e-20 1
TIGR_CMR|CBU_1925 - symbol:CBU_1925 "glucose-inhibited di... 237 5.7e-20 1
TIGR_CMR|VC_2774 - symbol:VC_2774 "hypothetical protein" ... 237 5.7e-20 1
UNIPROTKB|Q47U39 - symbol:rsmG "Ribosomal RNA small subun... 236 7.2e-20 1
TIGR_CMR|CPS_5046 - symbol:CPS_5046 "methyltransferase Gi... 236 7.2e-20 1
UNIPROTKB|Q60CS4 - symbol:rsmG "Ribosomal RNA small subun... 216 9.5e-18 1
UNIPROTKB|Q746Q5 - symbol:rsmG "Ribosomal RNA small subun... 211 3.2e-17 1
TIGR_CMR|GSU_3463 - symbol:GSU_3463 "glucose-inhibited di... 211 3.2e-17 1
UNIPROTKB|O53597 - symbol:rsmG "Ribosomal RNA small subun... 200 4.7e-16 1
UNIPROTKB|Q87TS4 - symbol:rsmG "Ribosomal RNA small subun... 198 7.7e-16 1
UNIPROTKB|Q8E8B0 - symbol:rsmG "Ribosomal RNA small subun... 198 7.7e-16 1
TIGR_CMR|SO_4757 - symbol:SO_4757 "glucose-inhibited divi... 198 7.7e-16 1
UNIPROTKB|Q5LWF2 - symbol:rsmG "Ribosomal RNA small subun... 136 1.7e-07 1
TIGR_CMR|SPO_0002 - symbol:SPO_0002 "glucose-inhibited di... 136 1.7e-07 1
>TAIR|locus:2170051 [details] [associations]
symbol:AT5G50110 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008649 "rRNA methyltransferase
activity" evidence=IEA] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 GO:GO:0005737 EMBL:CP002688 GO:GO:0031167
GO:GO:0008649 KO:K03501 TIGRFAMs:TIGR00138 IPI:IPI00548854
RefSeq:NP_568720.4 UniGene:At.29749 ProteinModelPortal:F4K7J0
SMR:F4K7J0 PRIDE:F4K7J0 EnsemblPlants:AT5G50110.1 GeneID:835075
KEGG:ath:AT5G50110 OMA:AITHPNS ArrayExpress:F4K7J0 Uniprot:F4K7J0
Length = 292
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 180/278 (64%), Positives = 222/278 (79%)
Query: 13 VFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRI-VNSSHFETLNTRQQEQIHLYV 71
V H+ S LIKHLP + +TF R K L+ + +S F+TL++ QQ+QIHLYV
Sbjct: 17 VSHI-LSLGHLIKHLPCTKSHTFLRRRFHYKALSNATVSTTASCFKTLSSSQQDQIHLYV 75
Query: 72 DALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTG 131
D LLQWN+KMNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+G
Sbjct: 76 DTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSG 134
Query: 132 AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFRE 191
AGLPGLVLAIACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE
Sbjct: 135 AGLPGLVLAIACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYRE 194
Query: 192 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251
++DVA+ARAVAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+
Sbjct: 195 KFDVAIARAVAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQIS 254
Query: 252 SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V+S SP+GQRT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 255 PVDSHSPYGQRTTVVCRKDHSTPQKYPREAGTPAKLPL 292
>UNIPROTKB|Q81JH4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0031167 GO:GO:0008649
RefSeq:NP_847877.1 RefSeq:YP_022417.1 RefSeq:YP_031572.1
ProteinModelPortal:Q81JH4 SMR:Q81JH4 DNASU:1085501
EnsemblBacteria:EBBACT00000008933 EnsemblBacteria:EBBACT00000017728
EnsemblBacteria:EBBACT00000023434 GeneID:1085501 GeneID:2815633
GeneID:2848383 KEGG:ban:BA_5732 KEGG:bar:GBAA_5732 KEGG:bat:BAS5335
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 BioCyc:BANT260799:GJAJ-5412-MONOMER
BioCyc:BANT261594:GJ7F-5588-MONOMER TIGRFAMs:TIGR00138
Uniprot:Q81JH4
Length = 239
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 98/234 (41%), Positives = 140/234 (59%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ + D
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITA--------AFYYDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 68 S--KPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>TIGR_CMR|BA_5732 [details] [associations]
symbol:BA_5732 "glucose-inhibited division protein B"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0031167 GO:GO:0008649
RefSeq:NP_847877.1 RefSeq:YP_022417.1 RefSeq:YP_031572.1
ProteinModelPortal:Q81JH4 SMR:Q81JH4 DNASU:1085501
EnsemblBacteria:EBBACT00000008933 EnsemblBacteria:EBBACT00000017728
EnsemblBacteria:EBBACT00000023434 GeneID:1085501 GeneID:2815633
GeneID:2848383 KEGG:ban:BA_5732 KEGG:bar:GBAA_5732 KEGG:bat:BAS5335
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 BioCyc:BANT260799:GJAJ-5412-MONOMER
BioCyc:BANT261594:GJ7F-5588-MONOMER TIGRFAMs:TIGR00138
Uniprot:Q81JH4
Length = 239
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 98/234 (41%), Positives = 140/234 (59%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ + D
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITA--------AFYYDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 68 S--KPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>UNIPROTKB|Q3AG54 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
TIGRFAMs:TIGR00138 RefSeq:YP_358880.1 ProteinModelPortal:Q3AG54
STRING:Q3AG54 GeneID:3727964 KEGG:chy:CHY_0008 PATRIC:21273217
BioCyc:CHYD246194:GJCN-8-MONOMER Uniprot:Q3AG54
Length = 235
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 96/230 (41%), Positives = 133/230 (57%)
Query: 63 QQEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
++E+I L Y L+ N K NLTAV +EV+ +H DS A++ I T
Sbjct: 17 EKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAVL--IYRDLT------- 67
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+L VD+GTGAG PG+ L I P K+ LL+S+ KRC+FLE V L NV ++ R
Sbjct: 68 --DLNAVDIGTGAGFPGIPLKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINER 125
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE LG+ FRE +DV +RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A
Sbjct: 126 AENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKA 185
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +G L + FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 186 AKQLGMELKDVYYYRLPGNFGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>TIGR_CMR|CHY_0008 [details] [associations]
symbol:CHY_0008 "glucose-inhibited division protein B"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=ISS] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
TIGRFAMs:TIGR00138 RefSeq:YP_358880.1 ProteinModelPortal:Q3AG54
STRING:Q3AG54 GeneID:3727964 KEGG:chy:CHY_0008 PATRIC:21273217
BioCyc:CHYD246194:GJCN-8-MONOMER Uniprot:Q3AG54
Length = 235
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 96/230 (41%), Positives = 133/230 (57%)
Query: 63 QQEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
++E+I L Y L+ N K NLTAV +EV+ +H DS A++ I T
Sbjct: 17 EKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAVL--IYRDLT------- 67
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+L VD+GTGAG PG+ L I P K+ LL+S+ KRC+FLE V L NV ++ R
Sbjct: 68 --DLNAVDIGTGAGFPGIPLKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINER 125
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE LG+ FRE +DV +RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A
Sbjct: 126 AENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKA 185
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +G L + FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 186 AKQLGMELKDVYYYRLPGNFGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>UNIPROTKB|Q71VW1 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 RefSeq:YP_015378.1
ProteinModelPortal:Q71VW1 SMR:Q71VW1 STRING:Q71VW1 GeneID:2799590
KEGG:lmf:LMOf2365_2790 PATRIC:20326968 Uniprot:Q71VW1
Length = 238
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 86/231 (37%), Positives = 133/231 (57%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + +T D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYV--DFTKF-DTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P +V++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLEVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>UNIPROTKB|Q97QD4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 OMA:PKKYPRQ
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 PIR:D95149
RefSeq:NP_345749.1 ProteinModelPortal:Q97QD4 SMR:Q97QD4
EnsemblBacteria:EBSTRT00000026297 GeneID:931799 KEGG:spn:SP_1285
PATRIC:19706969 Uniprot:Q97QD4
Length = 237
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 88/233 (37%), Positives = 129/233 (55%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>TIGR_CMR|DET_0776 [details] [associations]
symbol:DET_0776 "methyltransferase GidB" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 HOGENOM:HOG000221014 KO:K03501 ProtClustDB:PRK00107
TIGRFAMs:TIGR00138 RefSeq:YP_181508.1 ProteinModelPortal:Q3Z8E1
STRING:Q3Z8E1 GeneID:3229895 KEGG:det:DET0776 PATRIC:21608613
BioCyc:DETH243164:GJNF-777-MONOMER Uniprot:Q3Z8E1
Length = 235
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 83/233 (35%), Positives = 123/233 (52%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-IPPIKNSYTSHCD 116
+L++ Q EQ Y L+ +N ++NLTA+ ++ +H DS ++ + IK D
Sbjct: 14 SLSSVQLEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKG------D 67
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
KL+DVG+GAG PGL L I P K+ LLE+ K+ FL + L V+I+
Sbjct: 68 E------KLLDVGSGAGFPGLPLKIIFPGMKLGLLEATQKKARFLSEITAKLGLTGVEII 121
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE ++ +R++Y + +RAVA+M LAE LP VGG VA K D +EE+ +
Sbjct: 122 SQRAEDAAQNPLYRQKYTLVTSRAVADMATLAELTLPFCAVGGRVVAPKKGDIEEEMDRA 181
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ MG + ++ V+ R VV K T +YPR G PAK PL
Sbjct: 182 ASAIKKMGGRVSEIIKVDLPGLQDGRKLVVLEKISNTLSQYPRRAGMPAKNPL 234
>UNIPROTKB|P0A6U5 [details] [associations]
symbol:rsmG "16S rRNA m7G527 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0070476 "rRNA
(guanine-N7)-methylation" evidence=IDA] [GO:0070475 "rRNA base
methylation" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0070043 "rRNA (guanine-N7-)-methyltransferase activity"
evidence=IDA] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:L10328
EMBL:X01631 EMBL:X01383 GO:GO:0070043 eggNOG:COG0357 KO:K03501
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:DSHFTLL PIR:C30389 RefSeq:NP_418196.1 RefSeq:YP_491689.1
PDB:1JSX PDBsum:1JSX ProteinModelPortal:P0A6U5 SMR:P0A6U5
DIP:DIP-47992N IntAct:P0A6U5 EnsemblBacteria:EBESCT00000000419
EnsemblBacteria:EBESCT00000017232 GeneID:12934267 GeneID:948250
KEGG:ecj:Y75_p3428 KEGG:eco:b3740 PATRIC:32122979 EchoBASE:EB0371
EcoGene:EG10376 BioCyc:EcoCyc:EG10376-MONOMER
BioCyc:ECOL316407:JW3718-MONOMER BioCyc:MetaCyc:EG10376-MONOMER
EvolutionaryTrace:P0A6U5 Genevestigator:P0A6U5 Uniprot:P0A6U5
Length = 207
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 63/199 (31%), Positives = 103/199 (51%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L Q+ Q+ YV+ L +WN+ NLT+V+D NE++ RHI DS+ + P ++
Sbjct: 15 SLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGE------- 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +DVGTG GLPG+ L+I P+ TLL+S+ KR FL +L N++ V+
Sbjct: 68 ------RFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ 121
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
R E + F D ++RA A + + +C L G F A KG P++E+
Sbjct: 122 SRVEEFPSEPPF----DGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLP 177
Query: 238 RAVQLMGASLLQLCSVESQ 256
Q+ LQ+ +++ +
Sbjct: 178 EEYQVESVVKLQVPALDGE 196
>UNIPROTKB|P94614 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0031167 GO:GO:0008649 EMBL:Y10436
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:NP_820902.1 ProteinModelPortal:P94614
GeneID:1209838 KEGG:cbu:CBU_1925 PATRIC:17932581 OMA:VFHVEQL
BioCyc:CBUR227377:GJ7S-1898-MONOMER Uniprot:P94614
Length = 204
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 56/174 (32%), Positives = 96/174 (55%)
Query: 64 QEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL 123
Q+ + ++ L +WN+ NLTA+ ++ ++ H+ DSL+I+P +K
Sbjct: 21 QQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYLKGD------------- 67
Query: 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 183
K++DVG+GAG PG+ LA ACP+ K TL++S K+ FL A S ++ NV I++ R +
Sbjct: 68 KILDVGSGAGFPGIPLAFACPEKKFTLIDSKAKKTAFLLQAASRFKITNVTIIQERVGSY 127
Query: 184 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
F D RA+ +R + E L+R GG ++ KG P++E++ ++
Sbjct: 128 QPGFYF----DTITCRALGSVREIMEQTNHLLRSGGQWLIMKGAYPEKELRGTD 177
>UNIPROTKB|Q9KNG5 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
OMA:DSHFTLL PIR:F82035 RefSeq:NP_232400.1 ProteinModelPortal:Q9KNG5
DNASU:2614951 GeneID:2614951 KEGG:vch:VC2774 PATRIC:20084594
Uniprot:Q9KNG5
Length = 210
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 63/200 (31%), Positives = 103/200 (51%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T+ +Q+EQ+ YV L +WN+ NLT+V+D E++ +HI DSL + P +
Sbjct: 18 TVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSLVVSPHLVGE------- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +DVG+G GLPG+ LAI PD + L++S+ KR FL+ + ++ NV V+
Sbjct: 71 ------RFIDVGSGPGLPGIPLAIMHPDKEFVLIDSLGKRIRFLKQVIHDLKINNVLPVQ 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNS 236
R E + F D ++RA A M + +C L + G+F+A KG P +E+
Sbjct: 125 SRVEEFDPESGF----DGVLSRAFASMTDMVNWCQHLPKPNAGVFLALKGVRPDDEITLL 180
Query: 237 ERAVQLMGASLLQLCSVESQ 256
+ LQ+ +E +
Sbjct: 181 PEWCSVTDIKALQVPELEGE 200
>TIGR_CMR|CBU_1925 [details] [associations]
symbol:CBU_1925 "glucose-inhibited division protein B"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0031167 GO:GO:0008649 EMBL:Y10436
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:NP_820902.1 ProteinModelPortal:P94614
GeneID:1209838 KEGG:cbu:CBU_1925 PATRIC:17932581 OMA:VFHVEQL
BioCyc:CBUR227377:GJ7S-1898-MONOMER Uniprot:P94614
Length = 204
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 56/174 (32%), Positives = 96/174 (55%)
Query: 64 QEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL 123
Q+ + ++ L +WN+ NLTA+ ++ ++ H+ DSL+I+P +K
Sbjct: 21 QQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYLKGD------------- 67
Query: 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 183
K++DVG+GAG PG+ LA ACP+ K TL++S K+ FL A S ++ NV I++ R +
Sbjct: 68 KILDVGSGAGFPGIPLAFACPEKKFTLIDSKAKKTAFLLQAASRFKITNVTIIQERVGSY 127
Query: 184 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
F D RA+ +R + E L+R GG ++ KG P++E++ ++
Sbjct: 128 QPGFYF----DTITCRALGSVREIMEQTNHLLRSGGQWLIMKGAYPEKELRGTD 177
>TIGR_CMR|VC_2774 [details] [associations]
symbol:VC_2774 "hypothetical protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00074
InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
OMA:DSHFTLL PIR:F82035 RefSeq:NP_232400.1 ProteinModelPortal:Q9KNG5
DNASU:2614951 GeneID:2614951 KEGG:vch:VC2774 PATRIC:20084594
Uniprot:Q9KNG5
Length = 210
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 63/200 (31%), Positives = 103/200 (51%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T+ +Q+EQ+ YV L +WN+ NLT+V+D E++ +HI DSL + P +
Sbjct: 18 TVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSLVVSPHLVGE------- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +DVG+G GLPG+ LAI PD + L++S+ KR FL+ + ++ NV V+
Sbjct: 71 ------RFIDVGSGPGLPGIPLAIMHPDKEFVLIDSLGKRIRFLKQVIHDLKINNVLPVQ 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNS 236
R E + F D ++RA A M + +C L + G+F+A KG P +E+
Sbjct: 125 SRVEEFDPESGF----DGVLSRAFASMTDMVNWCQHLPKPNAGVFLALKGVRPDDEITLL 180
Query: 237 ERAVQLMGASLLQLCSVESQ 256
+ LQ+ +E +
Sbjct: 181 PEWCSVTDIKALQVPELEGE 200
>UNIPROTKB|Q47U39 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 RefSeq:YP_271684.1 ProteinModelPortal:Q47U39
STRING:Q47U39 GeneID:3518967 KEGG:cps:CPS_5046 PATRIC:21472871
OMA:DSHFTLL BioCyc:CPSY167879:GI48-5046-MONOMER Uniprot:Q47U39
Length = 209
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 64/184 (34%), Positives = 95/184 (51%)
Query: 64 QEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 120
QEQI L YV+ L +WN+ NLT+V+D +E++ +HI DSL + +
Sbjct: 20 QEQIDLLIQYVELLNKWNKAYNLTSVRDPSEMLVKHIMDSLMVGEVL-----------IG 68
Query: 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 180
N +DVGTG GLPG+ LAI P+ LL+S+ KR FL V +L NV V+ R
Sbjct: 69 KNF--IDVGTGPGLPGIPLAILYPERNFVLLDSLGKRITFLRQVVFQLKLSNVTPVKARV 126
Query: 181 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERA 239
E + E +D ++RA + + + +C L+ G F A KG PQ+E+
Sbjct: 127 E----EYQGEEPFDGVLSRAFSSLNDMVSWCKHLITTEQGRFFALKGQYPQDEISQLPEN 182
Query: 240 VQLM 243
+ L+
Sbjct: 183 ITLV 186
>TIGR_CMR|CPS_5046 [details] [associations]
symbol:CPS_5046 "methyltransferase GidB" species:167879
"Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
evidence=ND] [GO:0008168 "methyltransferase activity" evidence=ISS]
HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527 PIRSF:PIRSF003078
GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031167
GO:GO:0008649 eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107
TIGRFAMs:TIGR00138 HOGENOM:HOG000221012 RefSeq:YP_271684.1
ProteinModelPortal:Q47U39 STRING:Q47U39 GeneID:3518967
KEGG:cps:CPS_5046 PATRIC:21472871 OMA:DSHFTLL
BioCyc:CPSY167879:GI48-5046-MONOMER Uniprot:Q47U39
Length = 209
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 64/184 (34%), Positives = 95/184 (51%)
Query: 64 QEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 120
QEQI L YV+ L +WN+ NLT+V+D +E++ +HI DSL + +
Sbjct: 20 QEQIDLLIQYVELLNKWNKAYNLTSVRDPSEMLVKHIMDSLMVGEVL-----------IG 68
Query: 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 180
N +DVGTG GLPG+ LAI P+ LL+S+ KR FL V +L NV V+ R
Sbjct: 69 KNF--IDVGTGPGLPGIPLAILYPERNFVLLDSLGKRITFLRQVVFQLKLSNVTPVKARV 126
Query: 181 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERA 239
E + E +D ++RA + + + +C L+ G F A KG PQ+E+
Sbjct: 127 E----EYQGEEPFDGVLSRAFSSLNDMVSWCKHLITTEQGRFFALKGQYPQDEISQLPEN 182
Query: 240 VQLM 243
+ L+
Sbjct: 183 ITLV 186
>UNIPROTKB|Q60CS4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:YP_112543.1 ProteinModelPortal:Q60CS4
GeneID:3103227 KEGG:mca:MCA0002 PATRIC:22603717 Uniprot:Q60CS4
Length = 205
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 65/194 (33%), Positives = 104/194 (53%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q+E++ +++ L +WNR +LTA++D E + H+ DSL+I S+ H
Sbjct: 17 QRERLLRFLELLRKWNRVYSLTAIEDPCEGVRLHLLDSLSIA-----SFL-H-------G 63
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
+++DVGTG GLPG+ LAI P+ + LL+ K+ F+ AV L NV V+ R E+
Sbjct: 64 RRVLDVGTGPGLPGIPLAIVQPERRFVLLDCNAKKIRFVRQAVIELGLANVVPVQARIES 123
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
D E +D +ARA A + + PL+R GG +A KG P+ E+ + V +
Sbjct: 124 F-TDA---EGFDCVLARAYASLAEIWTDAAPLLRTGGTVLALKGRRPEAELGDLPAGVAV 179
Query: 243 MGASLLQLCSVESQ 256
G L++ VE++
Sbjct: 180 -GIHRLRVPGVEAE 192
>UNIPROTKB|Q746Q5 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:NP_954503.1 ProteinModelPortal:Q746Q5
GeneID:2686586 KEGG:gsu:GSU3463 PATRIC:22029783
ProtClustDB:CLSK829297 BioCyc:GSUL243231:GH27-3430-MONOMER
Uniprot:Q746Q5
Length = 217
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 69 LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 128
L+ D L +WNRK+NLTA+ E+ +H DSLA+ + D +L+D+
Sbjct: 30 LFADELKKWNRKINLTAITGDEEIALKHFVDSLALCRLVSGD-----D-------ELLDL 77
Query: 129 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 188
G+G G P L LA+ P ++++ K+ +F HA L + + R E L + +
Sbjct: 78 GSGGGFPVLPLALVFPTMTAVSVDAVEKKIIFQRHAARLLGCRRFEAIHARGEDLPRMLE 137
Query: 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248
R ++ V+RA +++ A LPL+ G +A KG EE + A++ MG +++
Sbjct: 138 RR--FNRIVSRAFSDIPSFARMALPLLMPQGTIIAMKGRGGAEEADAARGALEEMGLTVV 195
Query: 249 QLCSVESQSPFG--QRTAV 265
++ E + PF RT V
Sbjct: 196 RV--TEYRLPFSGDARTLV 212
>TIGR_CMR|GSU_3463 [details] [associations]
symbol:GSU_3463 "glucose-inhibited division protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 HOGENOM:HOG000221012
OMA:VFHVEQL RefSeq:NP_954503.1 ProteinModelPortal:Q746Q5
GeneID:2686586 KEGG:gsu:GSU3463 PATRIC:22029783
ProtClustDB:CLSK829297 BioCyc:GSUL243231:GH27-3430-MONOMER
Uniprot:Q746Q5
Length = 217
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 69 LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 128
L+ D L +WNRK+NLTA+ E+ +H DSLA+ + D +L+D+
Sbjct: 30 LFADELKKWNRKINLTAITGDEEIALKHFVDSLALCRLVSGD-----D-------ELLDL 77
Query: 129 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 188
G+G G P L LA+ P ++++ K+ +F HA L + + R E L + +
Sbjct: 78 GSGGGFPVLPLALVFPTMTAVSVDAVEKKIIFQRHAARLLGCRRFEAIHARGEDLPRMLE 137
Query: 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248
R ++ V+RA +++ A LPL+ G +A KG EE + A++ MG +++
Sbjct: 138 RR--FNRIVSRAFSDIPSFARMALPLLMPQGTIIAMKGRGGAEEADAARGALEEMGLTVV 195
Query: 249 QLCSVESQSPFG--QRTAV 265
++ E + PF RT V
Sbjct: 196 RV--TEYRLPFSGDARTLV 212
>UNIPROTKB|O53597 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005886 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842584 GO:GO:0031167 GO:GO:0008649 eggNOG:COG0357 KO:K03501
ProtClustDB:PRK00107 TIGRFAMs:TIGR00138 PIR:G70851
RefSeq:NP_218436.1 RefSeq:NP_338590.1 ProteinModelPortal:O53597
SMR:O53597 EnsemblBacteria:EBMYCT00000000932
EnsemblBacteria:EBMYCT00000069972 GeneID:886243 GeneID:926664
KEGG:mtc:MT4038 KEGG:mtu:Rv3919c PATRIC:18130637
TubercuList:Rv3919c HOGENOM:HOG000221013 OMA:PRLWSRH Uniprot:O53597
Length = 224
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAET 182
++VD+G+GAGLPG+ LAIA PD +V LLE + +R L V T L + V+IVRGRAE
Sbjct: 64 RVVDIGSGAGLPGVPLAIARPDLQVVLLEPLLRRTESLREMV--TDLGVAVEIVRGRAEE 121
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
D AV+RAVA + L ++ +PL+R G +A KG +EV+ R +
Sbjct: 122 SWVQDQLGGS-DAAVSRAVAALDKLTKWSMPLIRPNGRMLAIKGERAHDEVREHRRVMIA 180
Query: 243 MGA 245
GA
Sbjct: 181 SGA 183
>UNIPROTKB|Q87TS4 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00074 InterPro:IPR003682
Pfam:PF02527 PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE016853
GenomeReviews:AE016853_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:DSHFTLL RefSeq:NP_795327.1
ProteinModelPortal:Q87TS4 GeneID:1187301 KEGG:pst:PSPTO_5609
PATRIC:20002794 BioCyc:PSYR223283:GJIX-5682-MONOMER Uniprot:Q87TS4
Length = 211
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 44/131 (33%), Positives = 77/131 (58%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q EQ+ Y+ L++WN+ NLTAV++ +E++ RH+ DSL+++P I+ +
Sbjct: 21 LSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIEGT-------- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ +DVG+G G+PG+ +AI P+ ++LL+S K+ F +L N++++
Sbjct: 73 -----RWMDVGSGGGMPGIPMAILFPERNISLLDSNGKKTRFQTQVKLELKLDNLEVIHS 127
Query: 179 RAETLGKDVSF 189
RAE DV F
Sbjct: 128 RAENYQPDVPF 138
>UNIPROTKB|Q8E8B0 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:VFHVEQL RefSeq:NP_720273.1
ProteinModelPortal:Q8E8B0 GeneID:1172333 KEGG:son:SO_4757
PATRIC:23529183 Uniprot:Q8E8B0
Length = 206
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 54/173 (31%), Positives = 87/173 (50%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q++Q+ +V L +WN+ NLT+V+D ++ RHI DSL + + H
Sbjct: 21 QKKQLLDFVGMLNKWNKAYNLTSVRDPEIMLVRHIMDSLVV--------SKHLQGD---- 68
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
+ +DVGTG GLPG+ LAI PD LL+S+ KR F + + NV + R E
Sbjct: 69 -RFIDVGTGPGLPGIPLAIMNPDKTFVLLDSLGKRIRFQKQVAFELGIHNVSSIESRVEA 127
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ +++D ++RA A + + +C L G F A KG +E+++
Sbjct: 128 YQPE----QKFDGVLSRAFASIHDMLTWCHHLPAEHGQFYALKGQLSDDEMQH 176
>TIGR_CMR|SO_4757 [details] [associations]
symbol:SO_4757 "glucose-inhibited division protein B"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 ProtClustDB:PRK00107 TIGRFAMs:TIGR00138
HOGENOM:HOG000221012 OMA:VFHVEQL RefSeq:NP_720273.1
ProteinModelPortal:Q8E8B0 GeneID:1172333 KEGG:son:SO_4757
PATRIC:23529183 Uniprot:Q8E8B0
Length = 206
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 54/173 (31%), Positives = 87/173 (50%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q++Q+ +V L +WN+ NLT+V+D ++ RHI DSL + + H
Sbjct: 21 QKKQLLDFVGMLNKWNKAYNLTSVRDPEIMLVRHIMDSLVV--------SKHLQGD---- 68
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
+ +DVGTG GLPG+ LAI PD LL+S+ KR F + + NV + R E
Sbjct: 69 -RFIDVGTGPGLPGIPLAIMNPDKTFVLLDSLGKRIRFQKQVAFELGIHNVSSIESRVEA 127
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ +++D ++RA A + + +C L G F A KG +E+++
Sbjct: 128 YQPE----QKFDGVLSRAFASIHDMLTWCHHLPAEHGQFYALKGQLSDDEMQH 176
>UNIPROTKB|Q5LWF2 [details] [associations]
symbol:rsmG "Ribosomal RNA small subunit methyltransferase
G" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 RefSeq:YP_165275.1
ProteinModelPortal:Q5LWF2 GeneID:3194097 KEGG:sil:SPO0002
PATRIC:23373233 HOGENOM:HOG000221015 OMA:FHKGRDY
ProtClustDB:CLSK759030 Uniprot:Q5LWF2
Length = 204
Score = 136 (52.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/187 (24%), Positives = 93/187 (49%)
Query: 58 TLNTRQQ--EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
TLN ++ E++ ++ D + +WN ++NL + + + ++ RHI DS+ + +N+
Sbjct: 8 TLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVF---RNAP---- 60
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIAC----PDWKVTLLESMNKRCVFLEHAVSLTQLL 171
+L VD+G+G G PGL+ AI P+ + +ES ++ FL A +
Sbjct: 61 ----KGDL-WVDLGSGGGFPGLICAILAAEEKPETQFICVESDQRKSAFLRSAARECGIA 115
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
Q++ R E L D+ ARA+ ++ L + +++GG + KG ++
Sbjct: 116 -CQVISERIEHLDP-----LDADILSARALTDLTGLLGFAERHLKIGGTALFPKGAAWKK 169
Query: 232 EVKNSER 238
E++++ +
Sbjct: 170 ELQDAAK 176
>TIGR_CMR|SPO_0002 [details] [associations]
symbol:SPO_0002 "glucose-inhibited division protein B"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00074 InterPro:IPR003682 Pfam:PF02527
PIRSF:PIRSF003078 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0357 KO:K03501 TIGRFAMs:TIGR00138 RefSeq:YP_165275.1
ProteinModelPortal:Q5LWF2 GeneID:3194097 KEGG:sil:SPO0002
PATRIC:23373233 HOGENOM:HOG000221015 OMA:FHKGRDY
ProtClustDB:CLSK759030 Uniprot:Q5LWF2
Length = 204
Score = 136 (52.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/187 (24%), Positives = 93/187 (49%)
Query: 58 TLNTRQQ--EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
TLN ++ E++ ++ D + +WN ++NL + + + ++ RHI DS+ + +N+
Sbjct: 8 TLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVF---RNAP---- 60
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIAC----PDWKVTLLESMNKRCVFLEHAVSLTQLL 171
+L VD+G+G G PGL+ AI P+ + +ES ++ FL A +
Sbjct: 61 ----KGDL-WVDLGSGGGFPGLICAILAAEEKPETQFICVESDQRKSAFLRSAARECGIA 115
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
Q++ R E L D+ ARA+ ++ L + +++GG + KG ++
Sbjct: 116 -CQVISERIEHLDP-----LDADILSARALTDLTGLLGFAERHLKIGGTALFPKGAAWKK 169
Query: 232 EVKNSER 238
E++++ +
Sbjct: 170 ELQDAAK 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 289 289 0.00088 115 3 11 22 0.48 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 609 (65 KB)
Total size of DFA: 209 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.44u 0.08s 25.52t Elapsed: 00:00:01
Total cpu time: 25.45u 0.08s 25.53t Elapsed: 00:00:01
Start: Sat May 11 04:33:33 2013 End: Sat May 11 04:33:34 2013